Citrus Sinensis ID: 029198
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 197 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SA52 | 378 | Chloroplast stem-loop bin | yes | no | 0.979 | 0.510 | 0.886 | 1e-102 | |
| Q9LYA9 | 406 | Chloroplast stem-loop bin | no | no | 0.939 | 0.455 | 0.343 | 2e-24 | |
| P52577 | 310 | Isoflavone reductase homo | no | no | 0.695 | 0.441 | 0.275 | 0.0004 |
| >sp|Q9SA52|CP41B_ARATH Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 171/193 (88%), Positives = 188/193 (97%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238
Query: 181 GSGIQVTQLGHVK 193
SGIQ++QLGHVK
Sbjct: 239 NSGIQISQLGHVK 251
|
Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system. Involved in the regulation of heteroglycans and monosaccharide mobilization. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LYA9|CP41A_ARATH Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1 | Back alignment and function description |
|---|
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 10/195 (5%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
GG IG + ++ L+ GH VT+ T G ++++ F+E S + G+ +
Sbjct: 90 GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
V + + + FDVV D NG++ D V P++D + ++QF++ SSAG+Y ++ PH
Sbjct: 149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205
Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
E D V + H + E L NW S RP Y+ G N EEWFF R+ R +P
Sbjct: 206 EGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVP 262
Query: 179 IPGSGIQVTQLGHVK 193
IPGSG+Q+T + HV+
Sbjct: 263 IPGSGLQLTNISHVR 277
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Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system. Arabidopsis thaliana (taxid: 3702) |
| >sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGT +IG FL K GH R +A ++ + G++ Q F + ILH GD D
Sbjct: 11 IGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTILH--GDLND 67
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
++ + ++ K DVV G ILD + + +L S+ +
Sbjct: 68 HESLVKAI--KQVDVVISTVGSMQ-----ILDQTKIISAIKEAGNVKRFLPSEFGVDVDR 120
Query: 120 TDTVDP-KSRHKGKLNTESVLESKGVNWT 147
T V+P KS GK+ +E++G+ +T
Sbjct: 121 TSAVEPAKSAFAGKIQIRRTIEAEGIPYT 149
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 197 | ||||||
| 363806740 | 378 | uncharacterized protein LOC100791076 [Gl | 0.979 | 0.510 | 0.917 | 1e-103 | |
| 356572914 | 378 | PREDICTED: uncharacterized protein At1g0 | 0.979 | 0.510 | 0.901 | 1e-102 | |
| 388497252 | 378 | unknown [Medicago truncatula] | 0.979 | 0.510 | 0.917 | 1e-102 | |
| 312282041 | 379 | unnamed protein product [Thellungiella h | 0.979 | 0.509 | 0.896 | 1e-101 | |
| 255542956 | 381 | NAD dependent epimerase/dehydratase, put | 0.979 | 0.506 | 0.911 | 1e-101 | |
| 388512335 | 378 | unknown [Medicago truncatula] | 0.979 | 0.510 | 0.917 | 1e-101 | |
| 15217485 | 378 | RNA binding protein [Arabidopsis thalian | 0.979 | 0.510 | 0.886 | 1e-100 | |
| 21593201 | 378 | putative RNA-binding protein [Arabidopsi | 0.979 | 0.510 | 0.886 | 1e-100 | |
| 297843724 | 378 | catalytic/ coenzyme binding protein [Ara | 0.979 | 0.510 | 0.891 | 1e-100 | |
| 3850621 | 374 | putative RNA binding protein [Arabidopsi | 0.979 | 0.516 | 0.886 | 1e-100 |
| >gi|363806740|ref|NP_001242018.1| uncharacterized protein LOC100791076 [Glycine max] gi|255647108|gb|ACU24022.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/193 (91%), Positives = 188/193 (97%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESD ++A+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDSDYADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
+DFVKSSLSA+GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH ET
Sbjct: 119 FDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAET 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L++KGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQAKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238
Query: 181 GSGIQVTQLGHVK 193
GSGIQ+TQLGHVK
Sbjct: 239 GSGIQITQLGHVK 251
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356572914|ref|XP_003554610.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/193 (90%), Positives = 187/193 (96%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESD ++A+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDNDYADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
+DFVKSSLSA+GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH ET
Sbjct: 119 FDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAET 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+++GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238
Query: 181 GSGIQVTQLGHVK 193
SG+Q+TQLGHVK
Sbjct: 239 SSGLQITQLGHVK 251
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388497252|gb|AFK36692.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/193 (91%), Positives = 185/193 (95%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIGVFLSR LVKEGHQVTLFTRGKAPI QQLPGESD +FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPILDALPNLEQFIYCSSAGVYLKSDLLPH E
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEI 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238
Query: 181 GSGIQVTQLGHVK 193
GSGIQ+TQLGHVK
Sbjct: 239 GSGIQITQLGHVK 251
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Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|312282041|dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
|---|
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/193 (89%), Positives = 188/193 (97%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIGVFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPI+DALP LEQ+IYCSSAGVYLKSD+LPHCE
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEV 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238
Query: 181 GSGIQVTQLGHVK 193
SGIQ++QLGHVK
Sbjct: 239 NSGIQISQLGHVK 251
|
Source: Thellungiella halophila Species: Eutrema halophilum Genus: Eutrema Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542956|ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] gi|223548502|gb|EEF49993.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/193 (91%), Positives = 185/193 (95%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q+LPGESDQ++A+FSSK+LHLKGDRKD
Sbjct: 61 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQKLPGESDQDYADFSSKVLHLKGDRKD 120
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
+DFVKSSLSAKGFDVVYDINGREADEV PILDALPNLEQFIYCSSAGVYLKSDLLPH E
Sbjct: 121 FDFVKSSLSAKGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKSDLLPHSEK 180
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+LES GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DAVDPKSRHKGKLETESLLESSGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240
Query: 181 GSGIQVTQLGHVK 193
SGIQ+TQLGHVK
Sbjct: 241 NSGIQITQLGHVK 253
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388512335|gb|AFK44229.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/193 (91%), Positives = 185/193 (95%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIGVFLSR LVKEGHQVTLFTRGKAPI QQLPGESD +FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPILDALPNLEQFIYCSSAGVYLKSDLLPH E
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEI 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238
Query: 181 GSGIQVTQLGHVK 193
GSGIQ+TQLGHVK
Sbjct: 239 GSGIQITQLGHVK 251
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15217485|ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana] gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic; Short=CSP41-b; AltName: Full=Heteroglycan-interacting protein 1.3; AltName: Full=Protein CHLOROPLAST RNA BINDING; AltName: Full=Protein Gb5f; Flags: Precursor gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340 [Arabidopsis thaliana] gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6 [Arabidopsis thaliana] gi|4337177|gb|AAD18098.1| Identical to gb|Y10557 g5bf gene from Arabidopsis thaliana. ESTs gb|R30578, gb|R90475, gb|T22384, gb|T22425, gb|N64934 and gb|T46767 come from this gene [Arabidopsis thaliana] gi|14334754|gb|AAK59555.1| putative RNA-binding protein [Arabidopsis thaliana] gi|17979099|gb|AAL47493.1| putative RNA-binding protein [Arabidopsis thaliana] gi|332190310|gb|AEE28431.1| RNA binding protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/193 (88%), Positives = 188/193 (97%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238
Query: 181 GSGIQVTQLGHVK 193
SGIQ++QLGHVK
Sbjct: 239 NSGIQISQLGHVK 251
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21593201|gb|AAM65150.1| putative RNA-binding protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/193 (88%), Positives = 188/193 (97%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238
Query: 181 GSGIQVTQLGHVK 193
SGIQ++QLGHVK
Sbjct: 239 NSGIQISQLGHVK 251
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297843724|ref|XP_002889743.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] gi|297335585|gb|EFH66002.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/193 (89%), Positives = 187/193 (96%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIGVFLSRLLVK GHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGVFLSRLLVKGGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPI+DALP LEQ+IYCSSAGVYLKSD+LPHCE
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEE 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238
Query: 181 GSGIQVTQLGHVK 193
SGIQ++QLGHVK
Sbjct: 239 NSGIQISQLGHVK 251
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|3850621|emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/193 (88%), Positives = 188/193 (97%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 55 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 114
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE
Sbjct: 115 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 174
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 175 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 234
Query: 181 GSGIQVTQLGHVK 193
SGIQ++QLGHVK
Sbjct: 235 NSGIQISQLGHVK 247
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 197 | ||||||
| TAIR|locus:2203028 | 378 | CRB "chloroplast RNA binding" | 0.979 | 0.510 | 0.886 | 2.3e-94 | |
| TAIR|locus:2099222 | 406 | CSP41A "AT3G63140" [Arabidopsi | 0.939 | 0.455 | 0.343 | 9.7e-25 | |
| TAIR|locus:2025192 | 310 | AT1G75280 [Arabidopsis thalian | 0.675 | 0.429 | 0.287 | 2.1e-05 | |
| UNIPROTKB|Q81JK7 | 292 | BA_5697 "Uncharacterized prote | 0.487 | 0.328 | 0.318 | 8e-05 | |
| TIGR_CMR|BA_5697 | 292 | BA_5697 "conserved hypothetica | 0.487 | 0.328 | 0.318 | 8e-05 | |
| UNIPROTKB|Q71YS4 | 291 | LMOf2365_1769 "Putative unchar | 0.477 | 0.323 | 0.330 | 0.00014 | |
| TAIR|locus:2025197 | 318 | AT1G75290 [Arabidopsis thalian | 0.893 | 0.553 | 0.266 | 0.00017 |
| TAIR|locus:2203028 CRB "chloroplast RNA binding" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 171/193 (88%), Positives = 188/193 (97%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238
Query: 181 GSGIQVTQLGHVK 193
SGIQ++QLGHVK
Sbjct: 239 NSGIQISQLGHVK 251
|
|
| TAIR|locus:2099222 CSP41A "AT3G63140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 67/195 (34%), Positives = 104/195 (53%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
GG IG + ++ L+ GH VT+ T G ++++ F+E S + G+ +
Sbjct: 90 GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
V + + + FDVV D NG++ D V P++D + ++QF++ SSAG+Y ++ PH
Sbjct: 149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205
Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
E D V + H + E L NW S RP Y+ G N EEWFF R+ R +P
Sbjct: 206 EGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVP 262
Query: 179 IPGSGIQVTQLGHVK 193
IPGSG+Q+T + HV+
Sbjct: 263 IPGSGLQLTNISHVR 277
|
|
| TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 120 (47.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 44/153 (28%), Positives = 75/153 (49%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGT +IG FL K GH R +A ++ + G++ Q F + ILH GD D
Sbjct: 11 IGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTILH--GDLND 67
Query: 61 YDFVKSSLSAKGFDVVYDING--READEVEPILDALP---NLEQFIYCSSAGVYLKSDLL 115
++ + ++ K DVV G + D+ + I+ A+ N+++F+ S GV +
Sbjct: 68 HESLVKAI--KQVDVVISTVGSMQILDQTK-IISAIKEAGNVKRFLP-SEFGVDVD---- 119
Query: 116 PHCETDTVDP-KSRHKGKLNTESVLESKGVNWT 147
T V+P KS GK+ +E++G+ +T
Sbjct: 120 ---RTSAVEPAKSAFAGKIQIRRTIEAEGIPYT 149
|
|
| UNIPROTKB|Q81JK7 BA_5697 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
|---|
Score = 115 (45.5 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGTRF G L L+K+GH VT+ TRG I + F + L DR+D
Sbjct: 9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
+ S L K +D+VYD ++ + + + L ++I SS VY
Sbjct: 56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105
|
|
| TIGR_CMR|BA_5697 BA_5697 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 115 (45.5 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGTRF G L L+K+GH VT+ TRG I + F + L DR+D
Sbjct: 9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
+ S L K +D+VYD ++ + + + L ++I SS VY
Sbjct: 56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105
|
|
| UNIPROTKB|Q71YS4 LMOf2365_1769 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)] | Back alignment and assigned GO terms |
|---|
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 36/109 (33%), Positives = 55/109 (50%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GGTRF G L LV EGH+VT+ TRGK ++ F + +++ L + +D
Sbjct: 7 GGTRFFGKKLVERLVSEGHEVTIGTRGK----------TEDNFGDTVKRVI-LNRESRDA 55
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-LEQFIYCSSAGVY 109
F L+ + +DV+YD E +DA ++++IY SS VY
Sbjct: 56 LF---QLAKEDWDVIYDNICFSPKEALYAVDAFKGKVKRYIYTSSLSVY 101
|
|
| TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 113 (44.8 bits), Expect = 0.00017, P = 0.00017
Identities = 52/195 (26%), Positives = 85/195 (43%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGT IG + VK GH R +A ++ G++ Q F +F +LH GD D
Sbjct: 11 IGGTGHIGKLIIEASVKAGHSTLALVR-EASLSDPNKGKTVQNFKDFGVTLLH--GDLND 67
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDL-LPHCE 119
++ + ++ K DVV G ILD + + +L S+ + +
Sbjct: 68 HESLVKAI--KQADVVISTVGSMQ-----ILDQTKIISAIKEAGNVKRFLPSEFGMDVDK 120
Query: 120 TDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
+ V+P KS KL T +E++G+ +T L Y G Y P +L+ G P
Sbjct: 121 SSAVEPAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAG--YYLPT----LVQLEPGLTSP 174
Query: 179 IPGSGIQVTQLGHVK 193
P +++ G+VK
Sbjct: 175 -PRDKVKIFGDGNVK 188
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.139 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 197 197 0.00082 111 3 11 22 0.50 32
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 594 (63 KB)
Total size of DFA: 169 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.16u 0.11s 20.27t Elapsed: 00:00:01
Total cpu time: 20.16u 0.11s 20.27t Elapsed: 00:00:01
Start: Fri May 10 09:59:05 2013 End: Fri May 10 09:59:06 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SA52 | CP41B_ARATH | No assigned EC number | 0.8860 | 0.9796 | 0.5105 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 197 | |||
| PLN00016 | 378 | PLN00016, PLN00016, RNA-binding protein; Provision | 1e-114 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 1e-69 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 2e-14 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 4e-14 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 1e-12 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 1e-11 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 4e-11 | |
| cd05266 | 251 | cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | 2e-09 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 6e-09 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 1e-07 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 7e-07 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 8e-06 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 1e-05 | |
| cd05244 | 207 | cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu | 1e-05 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 9e-05 | |
| cd05242 | 296 | cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | 6e-04 | |
| cd08957 | 307 | cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic | 7e-04 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 7e-04 | |
| TIGR01777 | 291 | TIGR01777, yfcH, TIGR01777 family protein | 0.002 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 0.002 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 0.002 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 0.003 | |
| COG1090 | 297 | COG1090, COG1090, Predicted nucleoside-diphosphate | 0.004 |
| >gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Score = 330 bits (848), Expect = e-114
Identities = 111/195 (56%), Positives = 134/195 (68%), Gaps = 10/195 (5%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
GG FIG +L++ LVK GH+VTLFTRGK P +Q++ E F+E SS + + GD D
Sbjct: 63 GGHAFIGFYLAKELVKAGHEVTLFTRGKEP-SQKMKKEPFSRFSELSSAGVKTVWGDPAD 121
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDLLPHC 118
VKS ++ GFDVVYD NG++ DEVEP+ D P L+QF++CSSAGVY KSD PH
Sbjct: 122 ---VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHV 178
Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
E D V PK+ G L E+ L+ GVNWTS RP YIYGP N EEWFF RL GRP+P
Sbjct: 179 EGDAVKPKA---GHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVP 235
Query: 179 IPGSGIQVTQLGHVK 193
IPGSGIQ+TQLGHVK
Sbjct: 236 IPGSGIQLTQLGHVK 250
|
Length = 378 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 1e-69
Identities = 77/203 (37%), Positives = 99/203 (48%), Gaps = 23/203 (11%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGTRFIG L L+ GH VT+F RG+ + H+ GDR D
Sbjct: 6 IGGTRFIGKALVEELLAAGHDVTVFNRGRTKPD-------------LPEGVEHIVGDRND 52
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL-PNLEQFIYCSSAGVYLKS-----DL 114
D ++ L + FDVV D +VE LDA ++Q+I+ SSA VYLK +
Sbjct: 53 RDALEELLGGEDFDVVVDTIAYTPRQVERALDAFKGRVKQYIFISSASVYLKPGRVITES 112
Query: 115 LPHCETDTV---DPKSRHKGKLNTESVLESK-GVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
P E D V DP +GK E VL +T +RP YIYGP +Y +FF R
Sbjct: 113 TPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPPYIYGPGDYTGRLAYFFDR 172
Query: 171 LKAGRPIPIPGSGIQVTQLGHVK 193
L GRPI +PG G + Q HVK
Sbjct: 173 LARGRPILVPGDGHSLVQFIHVK 195
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 70.0 bits (171), Expect = 2e-14
Identities = 45/224 (20%), Positives = 67/224 (29%), Gaps = 44/224 (19%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
GG FIG L L+ GH V R + + L G D D
Sbjct: 6 TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVV------------LDLTD 53
Query: 61 YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
D V D V + +++ +P N+ ++F+
Sbjct: 54 RDLVDELAKGVP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFV 112
Query: 102 YCSSAGVYLKSDLLPHCETDTVDPKSR---HKGKLNTESVLES----KGVNWTSLRPVYI 154
+ SS V + D P+ KL E +L + G+ LRP +
Sbjct: 113 FASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNV 172
Query: 155 YGPLNYNPVEEWFFHRL-----KAGRPIPIPGSGIQVTQLGHVK 193
YGP + + K I I G G Q +V
Sbjct: 173 YGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVD 216
|
Length = 314 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 4e-14
Identities = 52/202 (25%), Positives = 74/202 (36%), Gaps = 39/202 (19%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GG FIG L R L++ GH+V + R ++HL
Sbjct: 5 GGAGFIGSHLVRRLLERGHEVVVIDRLDV--------------------VVHLAALVGV- 43
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE 119
S D ++ N +L+A +++F+Y SSA VY + LP E
Sbjct: 44 -----PASWDNPDEDFETN---VVGTLNLLEAARKAGVKRFVYASSASVYGSPEGLPEEE 95
Query: 120 TDTVDPKS-RHKGKLNTESVLES----KGVNWTSLRPVYIYGP---LNYNPVEEWFFHRL 171
P S KL E +L S G+ LR +YGP + V F R
Sbjct: 96 ETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPRLDGVVNDFIRRA 155
Query: 172 KAGRPIPIPGSGIQVTQLGHVK 193
G+P+ + G G Q HV
Sbjct: 156 LEGKPLTVFGGGNQTRDFIHVD 177
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 1e-12
Identities = 50/219 (22%), Positives = 83/219 (37%), Gaps = 39/219 (17%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GGT FIG L R L++EG++V + R + + I +GD D
Sbjct: 5 GGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGR------------IRFHEGDLTDP 52
Query: 62 DFVKSSLSAKGFDVVY--------DINGREADE--------VEPILDALP--NLEQFIYC 103
D ++ L+ D V + + + +L+A +++F++
Sbjct: 53 DALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFA 112
Query: 104 SSAGVYLKSDLLPHCETDTVDPKS---RHK--GKLNTESVLESKGVNWTSLRPVYIYGPL 158
SS+ VY P E + P S K + E+ + G+ LR +YGP
Sbjct: 113 SSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPG 172
Query: 159 NYNPVEE----WFFHRLKAGRPIPIPGSGIQVTQLGHVK 193
N +P R+ G+PI + G G Q +V
Sbjct: 173 NPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVD 211
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 1e-11
Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T G L + L+ GHQVT +R + + + ++ D D
Sbjct: 5 GATGKTGRRLVKELLARGHQVTALSRNPSKAP--------------APGVTPVQKDLFDL 50
Query: 62 DFVKSSLSAKGFDVVYD-INGREADE--VEPILDALPNL--EQFIYCSSAGVY-LKSDLL 115
+ +L G D V D R D V+ +LDA + + S+AG+Y +
Sbjct: 51 ADLAEAL--AGVDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTF 108
Query: 116 PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGP 157
+ P +R K E +L + G++WT +RP ++
Sbjct: 109 RLDDAPLFPPYARAKAAA--EELLRASGLDWTIVRPGALFDE 148
|
Length = 182 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 4e-11
Identities = 57/212 (26%), Positives = 82/212 (38%), Gaps = 46/212 (21%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GG FIG L L++EG QV +F R P L G ++ KGD ++
Sbjct: 6 GGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLGG------VDYI------KGDYENR 53
Query: 62 DFVKSSLSAKG--FDVVYDINGREADEVEPILDALPNL---------------EQFIYCS 104
++S+L + N + PILD N+ + I+ S
Sbjct: 54 ADLESALVGIDTVIHLASTTNPATS-NKNPILDIQTNVAPTVQLLEACAAAGIGKIIFAS 112
Query: 105 SAG-VYLKSDLLPHCETDTVDPKSRHK-GKLNTESVLE----SKGVNWTSLRPVYIYGPL 158
S G VY + LP E+D P S + KL E L G+++T LR YGP
Sbjct: 113 SGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRISNPYGPG 172
Query: 159 NYN-------PVEEWFFHRLKAGRPIPIPGSG 183
P+ +++ G PI I G G
Sbjct: 173 QRPDGKQGVIPI---ALNKILRGEPIEIWGDG 201
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 2e-09
Identities = 55/194 (28%), Positives = 75/194 (38%), Gaps = 26/194 (13%)
Query: 6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
++G L+R L+ +G QVT TR +A P A+ L G D D +
Sbjct: 8 YLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPLAAD-----LTQPGLLADVDHLV 62
Query: 66 SSLSAKGFDVVYDINGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDLLPHC-ETD 121
SL G + +LDAL P +++ IY SS GVY D +
Sbjct: 63 ISLPPPA----GSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVY--GDQQGEWVDET 116
Query: 122 TVDPKSRHKGK--LNTESVLESKG-VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
+ S G+ L E L + G T LR IYGP +P+ RL G
Sbjct: 117 SPPNPSTESGRALLEAEQALLALGSKPTTILRLAGIYGP-GRHPLR-----RLAQG--TG 168
Query: 179 IPGSGIQVTQLGHV 192
P +G T HV
Sbjct: 169 RPPAGNAPTNRIHV 182
|
Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 6e-09
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 29/167 (17%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T FIG L+R L+++GH+VTL R + DQE +GD +D
Sbjct: 5 GATGFIGRALARELLEQGHEVTLLVRNTKR-----LSKEDQEPVAVV------EGDLRDL 53
Query: 62 DFVKSSLSAKGFDVVY-----DINGREADEVEP-----ILDALP--NLEQFIYCSSAGVY 109
D + ++ +G DVV + R+ EV+ +L+A ++ FI+ SS G Y
Sbjct: 54 DSLSDAV--QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAY 111
Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYG 156
DL E P K K TE+VL + +T +RP IYG
Sbjct: 112 --GDLHEETEPSPSSPYLAVKAK--TEAVLREASLPYTIVRPGVIYG 154
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 1e-07
Identities = 49/182 (26%), Positives = 74/182 (40%), Gaps = 39/182 (21%)
Query: 2 GGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
GG+ F G L + L++ G V F A + EF LKGD D
Sbjct: 6 GGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPNIEF---------LKGDITD 56
Query: 61 YDFVKSSLSAKGFDVVYDI-------NGRE-ADEV-----EPILDALP--NLEQFIYCSS 105
+ V+ +LS G D V+ R+ EV + +LDA +++F+Y SS
Sbjct: 57 RNDVEQALS--GADCVFHTAAIVPLAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSS 114
Query: 106 AGVYLKSDL-------LPHCETDTVDPKSRHKGKLNTESVLESKGVN---WTSLRPVYIY 155
+ V LP+ D+ D + K + VLE+ G + +LRP I+
Sbjct: 115 SSVIFGGQNIHNGDETLPYPPLDS-DMYAETK-AIAEIIVLEANGRDDLLTCALRPAGIF 172
Query: 156 GP 157
GP
Sbjct: 173 GP 174
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 7e-07
Identities = 45/202 (22%), Positives = 74/202 (36%), Gaps = 46/202 (22%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-GESDQEFAEFSSKILHLKGDRKD 60
G T FIG ++ L K G QV + R +A + L G+ Q +L ++ D +D
Sbjct: 7 GATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQ--------VLFVEFDLRD 58
Query: 61 YDFVKSSLSAKGFDVVYDINGRE----ADEVEPILDALP----------NLEQFIYCSSA 106
+ ++ +L +G DVV ++ GR E + P +E+ I+ S+
Sbjct: 59 DESIRKAL--EGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHISAL 116
Query: 107 GVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEW 166
G D P + K E + T +RP ++G +
Sbjct: 117 GA------------DANSPSKYLRSKAEGEEAVREAFPEATIVRPSVVFGREDR------ 158
Query: 167 FFHRLKAGR---PIPIPGSGIQ 185
F +R P P G Q
Sbjct: 159 FLNRFAKLLAFLPFPPLIGGGQ 180
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 8e-06
Identities = 38/193 (19%), Positives = 64/193 (33%), Gaps = 35/193 (18%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDR 58
G T +G + R L+ G+QV R + + ++ + S L+G
Sbjct: 6 GATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAALEG-- 63
Query: 59 KDYDFVKSSLSAKGFDVVYDINGREADE--VEPILDALP--NLEQFIYCSSAGVY----L 110
D V S+ + G D ++DA +++F+ SS G
Sbjct: 64 --IDAVISAAGSGGKG---GPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSIGADKPSHP 118
Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
L P+ K E L + G+++T +RP G L +P
Sbjct: 119 LEALGPY-----------LDAKRKAEDYLRASGLDYTIVRP----GGLTDDPAGTGRVVL 163
Query: 171 LKAGRPI--PIPG 181
G + PI
Sbjct: 164 GGDGTRLDGPISR 176
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 1e-05
Identities = 56/221 (25%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GG FIG L L++ GH+V + + GK + LP E + ++GD
Sbjct: 6 GGAGFIGSHLVERLLERGHEVIVLDNLSTGKK---ENLP--------EVKPNVKFIEGDI 54
Query: 59 KDYDFVKSSLS--------AKGFDVVYDINGREADEVEPILDALPN-------------- 96
+D + V+ + A V I +PI D N
Sbjct: 55 RDDELVEFAFEGVDYVFHQAAQASVPRSIE-------DPIKDHEVNVLGTLNLLEAARKA 107
Query: 97 -LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK-GKLNTESVL----ESKGVNWTSLR 150
+++F+Y SS+ VY LP E +P S + K E G+ SLR
Sbjct: 108 GVKRFVYASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLR 167
Query: 151 PVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQV 186
+YGP Y V F R G P I G G Q
Sbjct: 168 YFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQT 208
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 1e-05
Identities = 36/168 (21%), Positives = 58/168 (34%), Gaps = 36/168 (21%)
Query: 2 GGTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
G T G +V+E GH+VT R A + K+ ++GD
Sbjct: 6 GATGRTG----SAIVREALARGHEVTALVRDPAKL------------PAEHEKLKVVQGD 49
Query: 58 RKDYDFVKSSLSAKGFDVVYDINGREADEVEP---------ILDALPNLE--QFIYCSSA 106
D + VK +L +G D V G D I+ A+ + I A
Sbjct: 50 VLDLEDVKEAL--EGQDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGA 107
Query: 107 GVYLKSDLLPHCETDTVDPKSRHKGKLNT---ESVLESKGVNWTSLRP 151
G + + P + + + VL G++WT++RP
Sbjct: 108 GSLDDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRP 155
|
Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 9e-05
Identities = 42/210 (20%), Positives = 74/210 (35%), Gaps = 39/210 (18%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T F+G L R L+ +G++V R + A L G E E GD D
Sbjct: 5 GATGFLGSNLVRALLAQGYRVRALVRSGSD-AVLLDGL-PVEVVE---------GDLTDA 53
Query: 62 DFVKSSLSAKGFDVVY------DINGREADEVEPI-LDALPNL---------EQFIYCSS 105
+ +++ KG D V+ + ++ E+ ++ N+ + ++ SS
Sbjct: 54 ASLAAAM--KGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSS 111
Query: 106 AGVY------LKSDLLPHCETDTVDPKSRHKGKLNTESVLE--SKGVNWTSLRPVYIYGP 157
+ P E + R K L VLE ++G++ + P ++GP
Sbjct: 112 IAALGGPPDGRIDETTPWNERPFPNDYYRSK-LLAELEVLEAAAEGLDVVIVNPSAVFGP 170
Query: 158 LNYNPVEEWFFHRLKAGRPIP-IPGSGIQV 186
+ P +P P G
Sbjct: 171 GDEGPTSTGLDVLDYLNGKLPAYPPGGTSF 200
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 6e-04
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE 39
GGT FIG L+R L GH+V + +R + A+ L
Sbjct: 6 GGTGFIGRALTRRLTAAGHEVVVLSR-RPGKAEGLAEV 42
|
This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296 |
| >gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 7e-04
Identities = 50/194 (25%), Positives = 78/194 (40%), Gaps = 31/194 (15%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGES------------DQEFAE 46
GG IG L L++ GHQV + F G+ P + D+ F +
Sbjct: 7 GGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHPNLTVVEGSIADKALVDKLFGD 66
Query: 47 FS-SKILHLKGDRKDYD-FVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCS 104
F ++H KD D + + +L+ +VV N +A + +++ IY
Sbjct: 67 FKPDAVVHTAAAYKDPDDWYEDTLT----NVVGGANVVQAAKKA-------GVKRLIYFQ 115
Query: 105 SAGVY-LKSDLLP-HCETDTVDPKSRHK-GKLNTESVLESKGVNWTSLRPVYIYGPLNYN 161
+A Y LK P + P S + K E LE GV++ + R + GP N
Sbjct: 116 TALCYGLKPMQQPIRLDHPRAPPGSSYAISKTAGEYYLELSGVDFVTFRLANVTGPRNVI 175
Query: 162 PVEEWFFHRLKAGR 175
F+ RLKAG+
Sbjct: 176 GPLPTFYQRLKAGK 189
|
Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 7e-04
Identities = 40/188 (21%), Positives = 59/188 (31%), Gaps = 31/188 (16%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKD 60
G T F+G + R L+ GH+V R A L G + + K L D
Sbjct: 7 GATGFVGGAVVRELLARGHEVRAAVRNPEA-AAALAGGVEVVLGDLRDPKSLVAGAKGVD 65
Query: 61 YDFVKSSLSAKG-----FDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLL 115
+ S L V + EA A ++ + S G
Sbjct: 66 GVLLISGLLDGSDAFRAVQVTAVVRAAEA--------AGAGVKHGVSLSVLGA------- 110
Query: 116 PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 175
D P + + K E+ L S G+ +T+LR Y + AG
Sbjct: 111 -----DAASPSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGA----AFIEAAEAAGL 161
Query: 176 PIPIPGSG 183
P+ G G
Sbjct: 162 PVIPRGIG 169
|
Length = 275 |
| >gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.002
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL 36
GGT FIG L++ L K GH+VT+ TR P A
Sbjct: 5 GGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTK 39
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.002
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 2 GGT-RFIGVFLSRLLVKEGHQVTLF----TRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
GGT R + L+ LV GH+VTLF ++ AP+ +P +
Sbjct: 19 GGTERVVA-ALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEA-- 75
Query: 57 DRKDYDFVKSSLSAKGFDVVYD 78
+ +L+A FD+V++
Sbjct: 76 ----LALAERALAAGDFDIVHN 93
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.002
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G FIG L+ L++EGH+V + + L + + F + GD +D
Sbjct: 6 GADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHF------ISGDVRDA 59
Query: 62 DFVKSSLSAKGFDVVY 77
V+ + K DVV+
Sbjct: 60 SEVEYLV--KKCDVVF 73
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 36.9 bits (86), Expect = 0.003
Identities = 35/159 (22%), Positives = 55/159 (34%), Gaps = 37/159 (23%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T +G + LL+ + V R E + FA ++ DY
Sbjct: 5 GATGKLGTAVVELLLAKVASVVALVRN---------PEKAKAFAADGVEVRQG-----DY 50
Query: 62 DFVKSSLSA-KGFDVVY----DINGREADEVEPILDALPNLEQFIYCSSAGV----YLKS 112
D ++ A +G D + + + +DA AGV YL
Sbjct: 51 DDPETLERAFEGVDRLLLISPSDLEDRIQQHKNFIDA---------AKQAGVKHIVYLS- 100
Query: 113 DLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP 151
+ D+ +R G TE LE+ G+ +T LRP
Sbjct: 101 --ASGADEDSPFLLARDHGA--TEKYLEASGIPYTILRP 135
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Score = 36.9 bits (86), Expect = 0.004
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
GGT IG L+ L K GHQVT+ TR +Q L + E + L L D
Sbjct: 5 GGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH--PNVTLWEGLADALTLGID 58
|
Length = 297 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 197 | |||
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.97 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.97 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.96 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.96 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.96 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.96 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.96 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.96 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.96 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.95 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.95 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.95 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.95 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.95 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.94 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.94 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.94 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.94 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.94 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.94 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.94 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.94 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.94 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.94 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.93 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.93 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.93 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.93 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.93 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.92 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.92 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.92 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.92 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.92 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.92 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.92 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.91 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.91 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.91 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.9 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.9 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.9 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.9 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.89 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.89 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.89 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.88 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.88 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.88 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.87 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.87 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.87 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.86 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.84 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.84 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.83 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.82 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.82 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.82 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.8 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.8 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.78 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.78 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.77 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.76 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.73 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.72 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.7 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.68 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.67 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.66 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.66 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.66 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.66 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.66 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.65 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.65 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.65 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.65 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.62 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.62 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.62 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.61 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.61 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.61 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.6 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.59 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.59 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.59 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.59 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.58 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.58 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.57 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.57 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.57 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.56 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.56 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.56 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.55 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.55 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.55 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.54 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.54 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.54 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.54 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.53 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.53 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.52 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.52 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.52 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.52 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.52 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.51 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.51 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.51 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.5 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.5 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.5 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.5 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.5 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.5 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.49 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.49 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.48 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.48 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.47 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.47 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.47 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.47 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.47 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.46 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.46 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.46 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.46 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.46 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.46 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.45 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.45 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.45 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.44 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.44 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.44 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.43 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.43 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.43 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.43 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.42 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.42 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.41 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.41 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.41 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.41 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.4 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.4 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.4 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.39 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.38 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.38 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.38 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.38 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.38 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.37 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.36 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.35 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.33 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.33 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.32 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.31 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.29 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.28 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.28 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.26 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.25 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.25 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.24 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.24 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.23 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.23 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.23 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.21 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.21 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.21 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.2 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.19 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.19 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.19 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.18 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.18 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.18 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.17 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.17 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.17 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.16 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.16 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.15 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.14 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.13 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.11 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.11 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.1 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.1 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.08 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.07 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.01 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.01 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 98.99 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 98.98 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 98.97 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.95 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 98.94 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.89 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 98.88 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.87 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 98.82 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.79 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.76 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.75 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.67 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 98.66 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.65 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.57 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.56 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.38 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.36 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.32 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.26 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.23 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.17 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.17 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.05 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 97.92 | |
| PLN00106 | 323 | malate dehydrogenase | 97.91 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 97.84 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.84 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.75 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.74 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.74 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.7 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.41 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 97.41 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.3 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.27 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.24 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.22 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.22 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 97.16 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.14 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 97.1 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 96.97 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 96.89 | |
| COG0027 | 394 | PurT Formate-dependent phosphoribosylglycinamide f | 96.87 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 96.87 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 96.81 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.81 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.8 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 96.74 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.72 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 96.72 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 96.71 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 96.7 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.63 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.58 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.57 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 96.54 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.49 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.48 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.47 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 96.47 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 96.46 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 96.36 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.36 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 96.25 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 96.24 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.23 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.21 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 96.17 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 96.14 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.14 | |
| PRK08223 | 287 | hypothetical protein; Validated | 96.13 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.07 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 96.06 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.03 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.03 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 95.98 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 95.98 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 95.97 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 95.93 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 95.88 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 95.86 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 95.84 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 95.83 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 95.83 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 95.82 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 95.8 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 95.77 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 95.76 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 95.75 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 95.75 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 95.67 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 95.66 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 95.65 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 95.59 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 95.57 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.49 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 95.47 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 95.46 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 95.45 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 95.42 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 95.39 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 95.38 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 95.33 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 95.32 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 95.31 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 95.31 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 95.28 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 95.26 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 95.25 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 95.23 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 95.2 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 95.14 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 95.12 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 95.11 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 95.07 | |
| PRK07411 | 390 | hypothetical protein; Validated | 95.02 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 95.0 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 94.9 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 94.87 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 94.82 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 94.79 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 94.74 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 94.71 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 94.71 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 94.7 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.68 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 94.68 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 94.65 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 94.65 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 94.64 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 94.6 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 94.59 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 94.55 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 94.52 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 94.5 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 94.45 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 94.45 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.39 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 94.37 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 94.31 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 94.31 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 94.28 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 94.26 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 94.24 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 94.22 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 94.2 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 94.19 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 94.17 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 94.15 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 94.13 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 94.08 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 94.08 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 94.07 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 94.06 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 94.04 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 94.01 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 94.01 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.98 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 93.97 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 93.96 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 93.93 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 93.92 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 93.89 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 93.85 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 93.82 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 93.81 | |
| PLN02928 | 347 | oxidoreductase family protein | 93.79 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 93.73 | |
| TIGR01161 | 352 | purK phosphoribosylaminoimidazole carboxylase, Pur | 93.71 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 93.68 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 93.66 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 93.65 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 93.63 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 93.62 | |
| PLN02494 | 477 | adenosylhomocysteinase | 93.6 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 93.53 | |
| PRK06487 | 317 | glycerate dehydrogenase; Provisional | 93.49 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.49 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.47 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 93.43 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 93.4 | |
| TIGR01692 | 288 | HIBADH 3-hydroxyisobutyrate dehydrogenase. This en | 93.36 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.36 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 93.35 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 93.35 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 93.33 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 93.32 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 93.29 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.28 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 93.23 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 93.21 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 93.2 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 93.17 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 93.17 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 93.17 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.13 | |
| cd01493 | 425 | APPBP1_RUB Ubiquitin activating enzyme (E1) subuni | 93.12 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 93.11 | |
| PRK15438 | 378 | erythronate-4-phosphate dehydrogenase PdxB; Provis | 93.1 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 93.04 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 93.03 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 93.01 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 92.9 | |
| PF03447 | 117 | NAD_binding_3: Homoserine dehydrogenase, NAD bindi | 92.88 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 92.88 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 92.81 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 92.81 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 92.79 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 92.77 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 92.7 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 92.69 | |
| PRK00257 | 381 | erythronate-4-phosphate dehydrogenase; Validated | 92.66 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 92.66 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 92.61 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 92.59 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 92.57 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 92.56 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 92.54 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 92.53 |
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=200.67 Aligned_cols=188 Identities=21% Similarity=0.258 Sum_probs=157.8
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||+||||+++++.+++.. .+|+.+++-.-.... .........++..++++|+.|.+.+.++++...+|+|+|
T Consensus 6 TGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~-----~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 6 TGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNL-----ENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred ecCcchHHHHHHHHHHhcCCCceEEEEecccccCCH-----HHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 7999999999999999986 457777764322110 011122334789999999999999999999888999999
Q ss_pred ccCCC----------------ccchHHHHHhCC--CC-CcEEEEecceecccCCCC--CCCCCCCCCCCCcc-hhhhhHH
Q 029198 79 INGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNTE 136 (197)
Q Consensus 79 ~a~~~----------------~~~~~~ll~~~~--~~-~~~v~~Ss~~vyg~~~~~--~~~e~~~~~~~~~~-~~k~~~e 136 (197)
+|+.+ +.++-+||++++ .. -||+++||..|||+.... .++|.++.+|+++| .||..++
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD 160 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD 160 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence 99874 346899999999 33 499999999999976543 79999999999999 9999998
Q ss_pred HHHh----hcCCcEEEEccceeeCCCCC-CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 137 SVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 137 ~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+++ .+|++++|.|+++-|||.++ -++++.++..++.|++++++|+|.+.|||+||+
T Consensus 161 ~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~Ve 222 (340)
T COG1088 161 LLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVE 222 (340)
T ss_pred HHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeH
Confidence 8764 58999999999999999865 478999999999999999999999999999996
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=200.99 Aligned_cols=183 Identities=22% Similarity=0.290 Sum_probs=154.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+||||++.+.+|++.|++|++++.-.......+.. ...+++.+|+.|.+.|.++|++.++|.|||+|
T Consensus 6 tGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~----------~~~~f~~gDi~D~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 6 TGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK----------LQFKFYEGDLLDRALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred ecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh----------ccCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence 79999999999999999999999999977664433321 11689999999999999999999999999999
Q ss_pred CCC----------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh-
Q 029198 81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE- 140 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~- 140 (197)
+.. +.++.+|+++|+ ++++|||.||+.+||.+...|++|+.+..|.++| .+|++.|++++
T Consensus 76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d 155 (329)
T COG1087 76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRD 155 (329)
T ss_pred cccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHH
Confidence 974 346899999999 9999999999999999999999999999999999 99999999984
Q ss_pred ---hcCCcEEEEccceeeCCC----------CCCChHHHHHHHHHcCC-CcccCC------CCceeEEEEEEE
Q 029198 141 ---SKGVNWTSLRPVYIYGPL----------NYNPVEEWFFHRLKAGR-PIPIPG------SGIQVTQLGHVK 193 (197)
Q Consensus 141 ---~~~~~~~i~r~~~i~g~~----------~~~~~~~~~~~~~~~~~-~~~~~~------~g~~~~~~i~v~ 193 (197)
+.+++++++|..++.|.. ....+++..++.+...+ .+.++| ||-..||||||.
T Consensus 156 ~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~ 228 (329)
T COG1087 156 AAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVD 228 (329)
T ss_pred HHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehh
Confidence 578999999999999843 12345666666655443 366664 678899999984
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=214.49 Aligned_cols=191 Identities=21% Similarity=0.216 Sum_probs=151.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++|+++|+++|++|++++|........+.............++.++.+|+.|.+.+.++++ ++|+|||+|
T Consensus 21 tGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--~~d~ViHlA 98 (348)
T PRK15181 21 TGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--NVDYVLHQA 98 (348)
T ss_pred ECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--CCCEEEECc
Confidence 799999999999999999999999999754322111100000000011358899999999999999998 899999999
Q ss_pred CCC----------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh-
Q 029198 81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE- 140 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~- 140 (197)
+.. ..++.+++++++ ++++||++||..+||.....+..|+++..|.+.| .+|..+|.+++
T Consensus 99 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~ 178 (348)
T PRK15181 99 ALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADV 178 (348)
T ss_pred cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHH
Confidence 853 234788999998 7899999999999997666667787777788888 99999998764
Q ss_pred ---hcCCcEEEEccceeeCCCCC-----CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 141 ---SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 141 ---~~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+.+++++++||+++|||++. ..+++.++..+.+++++.++++|.+.+||+||+
T Consensus 179 ~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~ 239 (348)
T PRK15181 179 FARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIE 239 (348)
T ss_pred HHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHH
Confidence 46899999999999999642 246778888888899898899999999999875
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=195.98 Aligned_cols=183 Identities=32% Similarity=0.465 Sum_probs=158.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++++++|+++|++|+.+.|++..... .....+++++.+|+.|.+++.++++..++|+|||+|
T Consensus 4 ~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~----------~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a 73 (236)
T PF01370_consen 4 TGATGFIGSALVRQLLKKGHEVIVLSRSSNSESF----------EEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA 73 (236)
T ss_dssp ETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHH----------HHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred EccCCHHHHHHHHHHHHcCCcccccccccccccc----------ccccceEEEEEeeccccccccccccccCceEEEEee
Confidence 6999999999999999999999999998776321 111127899999999999999999977889999999
Q ss_pred CCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh-
Q 029198 81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE- 140 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~- 140 (197)
+... ..+.+++++++ +++++|++||..+|+.....+++|+++..|.++| .+|...|++++
T Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~ 153 (236)
T PF01370_consen 74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRD 153 (236)
T ss_dssp SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 8741 23677889888 7789999999999998877788999988888888 99999999874
Q ss_pred ---hcCCcEEEEccceeeCCC----CCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 141 ---SKGVNWTSLRPVYIYGPL----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 141 ---~~~~~~~i~r~~~i~g~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+.+++++++||+.+|||. ....++..++..+.+++++.+++++++.++|+|++
T Consensus 154 ~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 213 (236)
T PF01370_consen 154 YAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVD 213 (236)
T ss_dssp HHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHH
T ss_pred cccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHH
Confidence 458999999999999998 45678889999999999999999999999998875
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=201.17 Aligned_cols=192 Identities=17% Similarity=0.222 Sum_probs=141.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCC---CCCC-----Cchhhh----hccCceEEEeecCCCHHHHHhhh
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ---LPGE-----SDQEFA----EFSSKILHLKGDRKDYDFVKSSL 68 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~-----~~~~~~----~~~~~~~~~~~d~~~~~~l~~~~ 68 (197)
||||||||++|+++|+++|++|++++|........ .... ....+. ....+++++.+|+.|.+.+.+++
T Consensus 53 TGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v~~~l 132 (442)
T PLN02572 53 IGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFLSEAF 132 (442)
T ss_pred ECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHHHHHH
Confidence 79999999999999999999999998643211000 0000 000000 01236899999999999999999
Q ss_pred hccCccEEEeccCCC-------------------ccchHHHHHhCC--CCC-cEEEEecceecccCCCCCCCC-------
Q 029198 69 SAKGFDVVYDINGRE-------------------ADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCE------- 119 (197)
Q Consensus 69 ~~~~~d~vi~~a~~~-------------------~~~~~~ll~~~~--~~~-~~v~~Ss~~vyg~~~~~~~~e------- 119 (197)
+..++|+|||+|+.. ..++.+++++++ +++ +||++||..+||.... +.+|
T Consensus 133 ~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~-~~~E~~i~~~~ 211 (442)
T PLN02572 133 KSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNI-DIEEGYITITH 211 (442)
T ss_pred HhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCC-CCccccccccc
Confidence 866799999999642 123667888887 665 8999999999996431 2222
Q ss_pred ----CC---CCCCCCcc-hhhhhHHHHHh----hcCCcEEEEccceeeCCCCCC------------------ChHHHHHH
Q 029198 120 ----TD---TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN------------------PVEEWFFH 169 (197)
Q Consensus 120 ----~~---~~~~~~~~-~~k~~~e~~~~----~~~~~~~i~r~~~i~g~~~~~------------------~~~~~~~~ 169 (197)
++ +..|.++| .+|..+|.+++ .++++++++||+++|||++.. ..+..++.
T Consensus 212 ~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~ 291 (442)
T PLN02572 212 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCV 291 (442)
T ss_pred ccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHH
Confidence 21 44566778 99999998763 469999999999999997432 34556677
Q ss_pred HHHcCCCcccCCCCceeEEEEEEE
Q 029198 170 RLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 170 ~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+.+|+++.++|+|++.+||+||+
T Consensus 292 ~~~~g~~i~v~g~G~~~Rdfi~V~ 315 (442)
T PLN02572 292 QAAVGHPLTVYGKGGQTRGFLDIR 315 (442)
T ss_pred HHhcCCCceecCCCCEEECeEEHH
Confidence 777898888899999999998875
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-29 Score=188.27 Aligned_cols=181 Identities=24% Similarity=0.350 Sum_probs=139.9
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccC-CCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
|||+||+|++|+++|+++| ++|.++++.+..... .+. .....+++.+|+.|++++.++++ ++|+||
T Consensus 3 TGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~---------~~~~~~~~~~Di~d~~~l~~a~~--g~d~V~ 71 (280)
T PF01073_consen 3 TGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQ---------KSGVKEYIQGDITDPESLEEALE--GVDVVF 71 (280)
T ss_pred EcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhh---------cccceeEEEeccccHHHHHHHhc--CCceEE
Confidence 7999999999999999999 799999987765321 111 11234499999999999999999 999999
Q ss_pred eccCCC---------------ccchHHHHHhCC--CCCcEEEEecceeccc-CCCCCC---CCCCCC--CCCCcc-hhhh
Q 029198 78 DINGRE---------------ADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPH---CETDTV--DPKSRH-KGKL 133 (197)
Q Consensus 78 ~~a~~~---------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~-~~~~~~---~e~~~~--~~~~~~-~~k~ 133 (197)
|+|+.. +.++++++++|+ +++++||+||..+++. ....++ +|+.+. .+...| .+|.
T Consensus 72 H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~ 151 (280)
T PF01073_consen 72 HTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKA 151 (280)
T ss_pred EeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHH
Confidence 998752 356999999999 8999999999998875 222222 344332 234567 9999
Q ss_pred hHHHHHhh-c--------CCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 134 NTESVLES-K--------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 134 ~~e~~~~~-~--------~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+|+++.+ . .+.+++|||+.||||++ ..+.+.+.+.+..+......+++....+|+||+
T Consensus 152 ~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d-~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~ 219 (280)
T PF01073_consen 152 LAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGD-QRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVE 219 (280)
T ss_pred HHHHHHHhhcccccccccceeEEEEeccEEeCccc-ccccchhhHHHHhcccceeecCCCceECcEeHH
Confidence 99998633 2 28999999999999975 334566677777886666778888899998875
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=191.78 Aligned_cols=181 Identities=18% Similarity=0.277 Sum_probs=142.4
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCC-CHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~l~~~~~~~~~d~vi~ 78 (197)
||||||+|++|+++|++. |++|++++|+......... ..+++++.+|+. +.+.+.++++ ++|+|||
T Consensus 7 tGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~--~~d~ViH 74 (347)
T PRK11908 7 LGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN----------HPRMHFFEGDITINKEWIEYHVK--KCDVILP 74 (347)
T ss_pred ECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc----------CCCeEEEeCCCCCCHHHHHHHHc--CCCEEEE
Confidence 799999999999999987 6999999986543211111 246899999997 7788888888 8999999
Q ss_pred ccCCCc----------------cchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCC-------CCCCcc-hhhh
Q 029198 79 INGREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGKL 133 (197)
Q Consensus 79 ~a~~~~----------------~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~-------~~~~~~-~~k~ 133 (197)
+|+... .++.+++++++ ..+++|++||..+||.....+++|+..+ .|.+.| .+|.
T Consensus 75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~ 154 (347)
T PRK11908 75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQ 154 (347)
T ss_pred CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHH
Confidence 987531 23678899888 3479999999999996555566665432 344567 9999
Q ss_pred hHHHHHh----hcCCcEEEEccceeeCCCCC---------CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 134 ~~e~~~~----~~~~~~~i~r~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+|++++ +.+++++++||+++|||+.. ..++..++..+.+++++.++++|++.++|+||+
T Consensus 155 ~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~ 227 (347)
T PRK11908 155 LMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDID 227 (347)
T ss_pred HHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHH
Confidence 9998874 46899999999999999631 346778888888999888888899999998875
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=193.12 Aligned_cols=185 Identities=58% Similarity=0.998 Sum_probs=145.5
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc-cCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||+|++|+++|++.||+|++++|++..... +.......+.+. ..+++++.+|+.| +.+++...++|+|||++
T Consensus 63 GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~-~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~~~~d~Vi~~~ 138 (378)
T PLN00016 63 GGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQK-MKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAGAGFDVVYDNN 138 (378)
T ss_pred CCceeEhHHHHHHHHHCCCEEEEEecCCcchhh-hccCchhhhhHhhhcCceEEEecHHH---HHhhhccCCccEEEeCC
Confidence 999999999999999999999999998754211 111000011111 1358899999877 44444444899999999
Q ss_pred CCCccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcchhhhhHHHHHhhcCCcEEEEccceeeCCC
Q 029198 81 GREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~i~r~~~i~g~~ 158 (197)
+.....+++++++++ ++++||++||.++|+.....++.|+++..|.. +|..+|.++++.+++++++||+++||++
T Consensus 139 ~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~---sK~~~E~~l~~~~l~~~ilRp~~vyG~~ 215 (378)
T PLN00016 139 GKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA---GHLEVEAYLQKLGVNWTSFRPQYIYGPG 215 (378)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc---hHHHHHHHHHHcCCCeEEEeceeEECCC
Confidence 887778999999998 88999999999999976656677766554433 7999999999999999999999999997
Q ss_pred CCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
....+..+++..+..++++.++++|.+.++|+|++
T Consensus 216 ~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~ 250 (378)
T PLN00016 216 NNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVK 250 (378)
T ss_pred CCCchHHHHHHHHHcCCceeecCCCCeeeceecHH
Confidence 65556677788888898888888899999998764
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=193.26 Aligned_cols=187 Identities=19% Similarity=0.212 Sum_probs=138.2
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
||||||||++|+++|+++ |++|++++|+.......... .. .....+++++.+|+.|.+.+.++++ ++|+|||+
T Consensus 20 TGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~-~~---~~~~~~~~~~~~Dl~d~~~l~~~~~--~~d~ViHl 93 (386)
T PLN02427 20 IGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEP-DT---VPWSGRIQFHRINIKHDSRLEGLIK--MADLTINL 93 (386)
T ss_pred ECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcc-cc---ccCCCCeEEEEcCCCChHHHHHHhh--cCCEEEEc
Confidence 799999999999999998 59999999875442211100 00 0012468999999999999999998 89999999
Q ss_pred cCCCc----------------cchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCC-------------------
Q 029198 80 NGREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV------------------- 123 (197)
Q Consensus 80 a~~~~----------------~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~------------------- 123 (197)
|+... .++.+++++++ ..++||++||..+||.....+..|+.+.
T Consensus 94 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~ 173 (386)
T PLN02427 94 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFG 173 (386)
T ss_pred ccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccC
Confidence 98521 12566788887 4489999999999996432222222211
Q ss_pred ---CCCCcc-hhhhhHHHHHhh----cCCcEEEEccceeeCCCCC------------CChHHHHHHHHHcCCCcccCCCC
Q 029198 124 ---DPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------------NPVEEWFFHRLKAGRPIPIPGSG 183 (197)
Q Consensus 124 ---~~~~~~-~~k~~~e~~~~~----~~~~~~i~r~~~i~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~g 183 (197)
.|.+.| .+|..+|+++.. .+++++++||+++|||+.. ..++..++..+.+++++.+++++
T Consensus 174 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g 253 (386)
T PLN02427 174 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGG 253 (386)
T ss_pred CCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCC
Confidence 123457 999999998743 6899999999999999631 23455566777889988888989
Q ss_pred ceeEEEEEEE
Q 029198 184 IQVTQLGHVK 193 (197)
Q Consensus 184 ~~~~~~i~v~ 193 (197)
++.++|+||+
T Consensus 254 ~~~r~~i~V~ 263 (386)
T PLN02427 254 QSQRTFVYIK 263 (386)
T ss_pred CceECcEeHH
Confidence 9999998875
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-29 Score=189.86 Aligned_cols=165 Identities=20% Similarity=0.212 Sum_probs=137.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+||||++++++|+++| +|++++|... .+.+|+.|.+.+.++++..++|+|||+|
T Consensus 6 tG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~A 62 (299)
T PRK09987 6 FGKTGQVGWELQRALAPLG-NLIALDVHST----------------------DYCGDFSNPEGVAETVRKIRPDVIVNAA 62 (299)
T ss_pred ECCCCHHHHHHHHHhhccC-CEEEeccccc----------------------cccCCCCCHHHHHHHHHhcCCCEEEECC
Confidence 7999999999999999999 7999988532 1357999999999999866799999999
Q ss_pred CCCc----------------cchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhc
Q 029198 81 GREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~ 142 (197)
+... .++.+++++++ ...++|++||..||+.....+++|++++.|.+.| .+|..+|+++..+
T Consensus 63 a~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~ 142 (299)
T PRK09987 63 AHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEH 142 (299)
T ss_pred ccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 8642 13677889888 3358999999999998766789999999998888 9999999999888
Q ss_pred CCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCC--CceeEEE
Q 029198 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS--GIQVTQL 189 (197)
Q Consensus 143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~ 189 (197)
..+++++|++++|||++ ..++..+++.+.+++++.++++ |.+.+++
T Consensus 143 ~~~~~ilR~~~vyGp~~-~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~ 190 (299)
T PRK09987 143 CAKHLIFRTSWVYAGKG-NNFAKTMLRLAKEREELSVINDQFGAPTGAE 190 (299)
T ss_pred CCCEEEEecceecCCCC-CCHHHHHHHHHhcCCCeEEeCCCcCCCCCHH
Confidence 88999999999999964 4677888888888888888876 4544433
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-28 Score=188.92 Aligned_cols=180 Identities=21% Similarity=0.245 Sum_probs=139.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||+++++.|+++||+|++++|......... ....+++.+|+.|.+.+..++. ++|+|||+|
T Consensus 27 tGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A 93 (370)
T PLN02695 27 TGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSED-----------MFCHEFHLVDLRVMENCLKVTK--GVDHVFNLA 93 (370)
T ss_pred ECCccHHHHHHHHHHHhCCCEEEEEEeccccccccc-----------cccceEEECCCCCHHHHHHHHh--CCCEEEEcc
Confidence 799999999999999999999999999653211000 0135788899999999888887 899999999
Q ss_pred CCC-----------------ccchHHHHHhCC--CCCcEEEEecceecccCCC----CCCCCCC--CCCCCCcc-hhhhh
Q 029198 81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL----LPHCETD--TVDPKSRH-KGKLN 134 (197)
Q Consensus 81 ~~~-----------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~----~~~~e~~--~~~~~~~~-~~k~~ 134 (197)
+.. ..++.+++++++ ++++||++||..+|+.... .++.|++ +..|.+.| .+|..
T Consensus 94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~ 173 (370)
T PLN02695 94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA 173 (370)
T ss_pred cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHH
Confidence 642 124678899887 7899999999999986432 1355554 45677778 99999
Q ss_pred HHHHHh----hcCCcEEEEccceeeCCCCC-----CChHHHHHHHHHc-CCCcccCCCCceeEEEEEEE
Q 029198 135 TESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA-GRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 135 ~e~~~~----~~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v~ 193 (197)
+|.++. +.+++++++||+++|||+.. ..++..++..+.+ +.++.++++|++.++|+||+
T Consensus 174 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~ 242 (370)
T PLN02695 174 TEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFID 242 (370)
T ss_pred HHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHH
Confidence 998763 46999999999999999642 2245567666554 57788889999999998876
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-28 Score=187.63 Aligned_cols=186 Identities=18% Similarity=0.250 Sum_probs=146.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+||+|+++++.|+++|++|++++|++....... +......++.++.+|+.|.+++.++++..++|+|||+|
T Consensus 10 tGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A 83 (349)
T TIGR02622 10 TGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLF------ELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA 83 (349)
T ss_pred ECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHH------HHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence 799999999999999999999999999865422110 00111235778999999999999999877799999999
Q ss_pred CCC----------------ccchHHHHHhCC--C-CCcEEEEecceecccCC-CCCCCCCCCCCCCCcc-hhhhhHHHHH
Q 029198 81 GRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSD-LLPHCETDTVDPKSRH-KGKLNTESVL 139 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~-~~~~~e~~~~~~~~~~-~~k~~~e~~~ 139 (197)
+.. ..++.+++++++ + .+++|++||..+|+... ..+..|+.+..|.+.| .+|..+|.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~ 163 (349)
T TIGR02622 84 AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVI 163 (349)
T ss_pred cccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHH
Confidence 852 123667888877 4 68999999999998643 2356677777777888 8999999877
Q ss_pred hh-----------cCCcEEEEccceeeCCCCC--CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 140 ES-----------KGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 140 ~~-----------~~~~~~i~r~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+. .+++++++||+++|||++. .++++.+++.+.+++++.+ ++|++.++|+||+
T Consensus 164 ~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~ 229 (349)
T TIGR02622 164 ASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVL 229 (349)
T ss_pred HHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHH
Confidence 43 2899999999999999742 4577888999888988765 5789999999985
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-28 Score=201.76 Aligned_cols=181 Identities=20% Similarity=0.225 Sum_probs=142.5
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHH-HHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-l~~~~~~~~~d~vi~ 78 (197)
||||||+|++|+++|++. ||+|++++|.+........ ..+++++.+|+.|... +.++++ ++|+|||
T Consensus 321 TGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~----------~~~~~~~~gDl~d~~~~l~~~l~--~~D~ViH 388 (660)
T PRK08125 321 LGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG----------HPRFHFVEGDISIHSEWIEYHIK--KCDVVLP 388 (660)
T ss_pred ECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC----------CCceEEEeccccCcHHHHHHHhc--CCCEEEE
Confidence 799999999999999986 7999999997654221111 2468899999998654 577777 8999999
Q ss_pred ccCCC----------------ccchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCC-------CCCCcc-hhhh
Q 029198 79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGKL 133 (197)
Q Consensus 79 ~a~~~----------------~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~-------~~~~~~-~~k~ 133 (197)
+|+.. ..++.+++++++ ..++||++||..+||.....+.+|+++. .|.+.| .+|.
T Consensus 389 lAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~ 468 (660)
T PRK08125 389 LVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQ 468 (660)
T ss_pred CccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHH
Confidence 99753 234677889988 3389999999999997555567777642 234457 9999
Q ss_pred hHHHHHh----hcCCcEEEEccceeeCCCCC---------CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 134 ~~e~~~~----~~~~~~~i~r~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+|.+++ .++++++++||+++|||++. ...+..++..+.+++++.++++|++.++|+||+
T Consensus 469 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~ 541 (660)
T PRK08125 469 LLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIR 541 (660)
T ss_pred HHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHH
Confidence 9999874 46899999999999999742 245677888888898888889999999998765
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=186.36 Aligned_cols=193 Identities=18% Similarity=0.173 Sum_probs=145.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCcc-CCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
||||||||++++++|+++|++|++++|+++... ..+.............+++++.+|+.|.+.+.++++..++|+|||+
T Consensus 6 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH~ 85 (343)
T TIGR01472 6 TGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPTEIYNL 85 (343)
T ss_pred EcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCCEEEEC
Confidence 799999999999999999999999999864311 1110000000000124689999999999999999986678999999
Q ss_pred cCCCc----------------cchHHHHHhCC--CC---CcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHH
Q 029198 80 NGREA----------------DEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES 137 (197)
Q Consensus 80 a~~~~----------------~~~~~ll~~~~--~~---~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~ 137 (197)
|+... .++.+++++++ ++ ++||++||..+||.....+.+|+.+..|.+.| .+|..+|.
T Consensus 86 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~ 165 (343)
T TIGR01472 86 AAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHW 165 (343)
T ss_pred CcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence 98631 14677888887 44 38999999999997666678888888888888 99999999
Q ss_pred HHh----hcCCcEEEEccceeeCCCCCCC----hHHHHHHHHHcCCC-cccCCCCceeEEEEEEE
Q 029198 138 VLE----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 138 ~~~----~~~~~~~i~r~~~i~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~g~~~~~~i~v~ 193 (197)
+++ +.+++++..|+.++|||+.... .+..++..+..+++ ..++|+|++.+||+||+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~ 230 (343)
T TIGR01472 166 ITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAK 230 (343)
T ss_pred HHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHH
Confidence 874 3589999999999999864322 23445556666764 34568899999999876
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=186.48 Aligned_cols=188 Identities=20% Similarity=0.232 Sum_probs=142.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEE-EecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
||||||||++++++|+++|+++++ ++|.... ...... ... ....++.++.+|+.|.+++.++++..++|+|||+
T Consensus 7 tGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~~~~---~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~ 81 (355)
T PRK10217 7 TGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNLMSL---APV-AQSERFAFEKVDICDRAELARVFTEHQPDCVMHL 81 (355)
T ss_pred EcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cchhhh---hhc-ccCCceEEEECCCcChHHHHHHHhhcCCCEEEEC
Confidence 799999999999999999987554 4443221 110000 000 0123578899999999999999986679999999
Q ss_pred cCCCc----------------cchHHHHHhCC-----------CCCcEEEEecceecccC--CCCCCCCCCCCCCCCcc-
Q 029198 80 NGREA----------------DEVEPILDALP-----------NLEQFIYCSSAGVYLKS--DLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 80 a~~~~----------------~~~~~ll~~~~-----------~~~~~v~~Ss~~vyg~~--~~~~~~e~~~~~~~~~~- 129 (197)
|+... .++.+++++++ +++++|++||..+||.. ...+++|+.+..|.+.|
T Consensus 82 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~ 161 (355)
T PRK10217 82 AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYS 161 (355)
T ss_pred CcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhH
Confidence 98631 23566777763 35799999999999853 23467888777788888
Q ss_pred hhhhhHHHHHh----hcCCcEEEEccceeeCCCCC-CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 130 ~~k~~~e~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+|..+|.+++ +.+++++++||+++|||++. ..+++.++..+..++++.++++|++.++|+||+
T Consensus 162 ~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~ 230 (355)
T PRK10217 162 ASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVE 230 (355)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHH
Confidence 99999998763 46899999999999999853 356777778788888888889999999998865
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=188.65 Aligned_cols=180 Identities=21% Similarity=0.240 Sum_probs=138.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|+++|++|++++|.......... . .....+++++.+|+.+.. +. ++|+|||+|
T Consensus 126 TGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~-----~-~~~~~~~~~~~~Di~~~~-----~~--~~D~ViHlA 192 (436)
T PLN02166 126 TGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLV-----H-LFGNPRFELIRHDVVEPI-----LL--EVDQIYHLA 192 (436)
T ss_pred ECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhh-----h-hccCCceEEEECcccccc-----cc--CCCEEEECc
Confidence 7999999999999999999999999986432111110 0 001246778888887642 34 799999999
Q ss_pred CCC----------------ccchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCC-----CCCCCCcc-hhhhhHHH
Q 029198 81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES 137 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~-----~~~~~~~~-~~k~~~e~ 137 (197)
+.. +.++.+++++|+ ...++|++||..+||+....+.+|+. +..|.+.| .+|..+|+
T Consensus 193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~ 272 (436)
T PLN02166 193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET 272 (436)
T ss_pred eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence 753 223688999998 33589999999999976555666763 44556668 99999999
Q ss_pred HHh----hcCCcEEEEccceeeCCCCC---CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 138 VLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 138 ~~~----~~~~~~~i~r~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
++. ..+++++++||+++|||++. ..++..++..+.+++++.+++++++.++|+||+
T Consensus 273 ~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~ 335 (436)
T PLN02166 273 LAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVS 335 (436)
T ss_pred HHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHH
Confidence 764 45899999999999999742 356778888888999998999999999998864
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=194.32 Aligned_cols=187 Identities=21% Similarity=0.326 Sum_probs=146.4
Q ss_pred CCcccchHHHHHHHHHHC--CCeEEEEecCCCCc-cCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~--g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
||||||||++++++|+++ +++|++++|..... ...+.. .....+++++.+|+.|.+.+..++...++|+||
T Consensus 12 TGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi 85 (668)
T PLN02260 12 TGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP------SKSSPNFKFVKGDIASADLVNYLLITEGIDTIM 85 (668)
T ss_pred ECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh------cccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence 799999999999999998 68999999853110 000000 001247899999999999888877555899999
Q ss_pred eccCCCc----------------cchHHHHHhCC--C-CCcEEEEecceecccCCCCC---CCCCCCCCCCCcc-hhhhh
Q 029198 78 DINGREA----------------DEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLP---HCETDTVDPKSRH-KGKLN 134 (197)
Q Consensus 78 ~~a~~~~----------------~~~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~---~~e~~~~~~~~~~-~~k~~ 134 (197)
|+|+... .++.+++++++ + +++||++||..+||.....+ ..|+.+..|.+.| .+|..
T Consensus 86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~ 165 (668)
T PLN02260 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAG 165 (668)
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHH
Confidence 9998642 23677899888 4 78999999999999654322 3566666777778 99999
Q ss_pred HHHHHh----hcCCcEEEEccceeeCCCCC-CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 135 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 135 ~e~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+|.+++ +.+++++++||+++|||++. ..+++.++..+.+++++.++++|++.++|+||+
T Consensus 166 aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~ 229 (668)
T PLN02260 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCE 229 (668)
T ss_pred HHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHH
Confidence 999874 36899999999999999754 356778888888899898999999999998875
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-27 Score=170.33 Aligned_cols=187 Identities=24% Similarity=0.320 Sum_probs=154.7
Q ss_pred CCcccchHHHHHHHHHHC--CCeEEEEecCCCCc-cCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~--g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
|||+||+|++.+..+... .++.+.++.-.--. .+.+.. ..-.++..++.+|+.+...+..++....+|.|+
T Consensus 12 tgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~------~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vi 85 (331)
T KOG0747|consen 12 TGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEP------VRNSPNYKFVEGDIADADLVLYLFETEEIDTVI 85 (331)
T ss_pred ecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhh------hccCCCceEeeccccchHHHHhhhccCchhhhh
Confidence 799999999999999987 35666555532111 111111 111368999999999999999999888999999
Q ss_pred eccCCC----------------ccchHHHHHhCC---CCCcEEEEecceecccCCCCCCC-CCCCCCCCCcc-hhhhhHH
Q 029198 78 DINGRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC-ETDTVDPKSRH-KGKLNTE 136 (197)
Q Consensus 78 ~~a~~~----------------~~~~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~~~~~-e~~~~~~~~~~-~~k~~~e 136 (197)
|+|+.. +-++..|+++++ ++++|||+||..|||++...+.. |.+.++|.++| .+|.++|
T Consensus 86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE 165 (331)
T KOG0747|consen 86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAE 165 (331)
T ss_pred hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHH
Confidence 999874 234778999988 78999999999999998877777 88999999999 9999999
Q ss_pred HHHh----hcCCcEEEEccceeeCCCCCC-ChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 137 SVLE----SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 137 ~~~~----~~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
..++ +++++++++|.++||||++.+ .+++.+++.+..+++.++.|+|.+.++|+||+
T Consensus 166 ~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~ve 227 (331)
T KOG0747|consen 166 MLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVE 227 (331)
T ss_pred HHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHH
Confidence 9875 578999999999999998765 57888999889999999999999999999975
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=179.14 Aligned_cols=191 Identities=18% Similarity=0.164 Sum_probs=143.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCcc-CCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||+||+|++++++|+++|++|++++|.+.... ..+.... ........+++++.+|+.|.+++.++++...+|+|||+
T Consensus 12 TGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 90 (340)
T PLN02653 12 TGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIY-IDPHPNKARMKLHYGDLSDASSLRRWLDDIKPDEVYNL 90 (340)
T ss_pred ECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhc-cccccccCceEEEEecCCCHHHHHHHHHHcCCCEEEEC
Confidence 799999999999999999999999999754311 1111000 00001124588999999999999999986679999999
Q ss_pred cCCCc----------------cchHHHHHhCC--CCC-----cEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhH
Q 029198 80 NGREA----------------DEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT 135 (197)
Q Consensus 80 a~~~~----------------~~~~~ll~~~~--~~~-----~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~ 135 (197)
|+... .++.+++++++ +++ +||++||..+||.... +.+|+.+..|.+.| .+|..+
T Consensus 91 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~ 169 (340)
T PLN02653 91 AAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPRSPYAVAKVAA 169 (340)
T ss_pred CcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCCChhHHHHHHH
Confidence 98631 23677888877 443 8999999999997654 77888888888888 999999
Q ss_pred HHHHh----hcCCcEEEEccceeeCCCCCCCh----HHHHHHHHHcCCCccc-CCCCceeEEEEEEE
Q 029198 136 ESVLE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRPIPI-PGSGIQVTQLGHVK 193 (197)
Q Consensus 136 e~~~~----~~~~~~~i~r~~~i~g~~~~~~~----~~~~~~~~~~~~~~~~-~~~g~~~~~~i~v~ 193 (197)
|.+++ +++++++..|+.++|||+....+ +..++..+.++++..+ +|+|++.++|+||+
T Consensus 170 e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~ 236 (340)
T PLN02653 170 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAG 236 (340)
T ss_pred HHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHH
Confidence 99874 46788899999999999643333 3344556667776554 48899999999875
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.4e-27 Score=179.04 Aligned_cols=178 Identities=17% Similarity=0.162 Sum_probs=126.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HH-HHhhhhc---cCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DF-VKSSLSA---KGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~-l~~~~~~---~~~ 73 (197)
||||||+|++|+++|++.|++++++.|+...... ...+..+|+.|. +. +..+++. .++
T Consensus 5 tGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~---------------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 69 (308)
T PRK11150 5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK---------------FVNLVDLDIADYMDKEDFLAQIMAGDDFGDI 69 (308)
T ss_pred ecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH---------------HHhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence 7999999999999999999987777766443110 011223455443 33 2333321 269
Q ss_pred cEEEeccCCC--------------ccchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHH
Q 029198 74 DVVYDINGRE--------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES 137 (197)
Q Consensus 74 d~vi~~a~~~--------------~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~ 137 (197)
|+|||+|+.. ..++.+++++++ ...+||++||..+||+....+.+|..+..|.+.| .+|..+|+
T Consensus 70 d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~ 149 (308)
T PRK11150 70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDE 149 (308)
T ss_pred cEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHH
Confidence 9999999742 123678899988 3347999999999997655567777777888888 99999998
Q ss_pred HHhh----cCCcEEEEccceeeCCCCCC-C----hHHHHHHHHHcCCCcccC-CCCceeEEEEEEE
Q 029198 138 VLES----KGVNWTSLRPVYIYGPLNYN-P----VEEWFFHRLKAGRPIPIP-GSGIQVTQLGHVK 193 (197)
Q Consensus 138 ~~~~----~~~~~~i~r~~~i~g~~~~~-~----~~~~~~~~~~~~~~~~~~-~~g~~~~~~i~v~ 193 (197)
++++ .+++++++||+++|||++.. . ....+.+.+.+++...++ ++++..++|+||+
T Consensus 150 ~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~ 215 (308)
T PRK11150 150 YVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVG 215 (308)
T ss_pred HHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHH
Confidence 7653 58999999999999997432 1 233455677777755454 5667789998875
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=176.24 Aligned_cols=165 Identities=19% Similarity=0.186 Sum_probs=137.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||++|++++++|++.|++|++++|. .+|+.+.+++.+++++.++|+|||++
T Consensus 5 ~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------------~~d~~~~~~~~~~~~~~~~d~vi~~a 58 (287)
T TIGR01214 5 TGANGQLGRELVQQLSPEGRVVVALTSS--------------------------QLDLTDPEALERLLRAIRPDAVVNTA 58 (287)
T ss_pred EcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------------ccCCCCHHHHHHHHHhCCCCEEEECC
Confidence 6999999999999999999999999884 25888999999999877789999999
Q ss_pred CCCc----------------cchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhc
Q 029198 81 GREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~ 142 (197)
+... .++.+++++++ ...++|++||..+|+.....+++|+++..|.+.| .+|..+|.+++..
T Consensus 59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~ 138 (287)
T TIGR01214 59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA 138 (287)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence 8631 13677888877 3358999999999987666788898888888888 9999999999988
Q ss_pred CCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+.+++++||+++||++....++..++..+.+++++.+.++ ++++|+|++
T Consensus 139 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~ 187 (287)
T TIGR01214 139 GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDD--QIGSPTYAK 187 (287)
T ss_pred CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecC--CCcCCcCHH
Confidence 9999999999999997545667777888877777776553 567887654
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=184.62 Aligned_cols=180 Identities=20% Similarity=0.219 Sum_probs=136.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|+++|++|++++|........... .....+++++.+|+.++. +. ++|+|||+|
T Consensus 125 TGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~------~~~~~~~~~i~~D~~~~~-----l~--~~D~ViHlA 191 (442)
T PLN02206 125 TGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMH------HFSNPNFELIRHDVVEPI-----LL--EVDQIYHLA 191 (442)
T ss_pred ECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhh------hccCCceEEEECCccChh-----hc--CCCEEEEee
Confidence 79999999999999999999999998754321111100 001246788889987653 33 799999999
Q ss_pred CCC----------------ccchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCC-----CCCCCCcc-hhhhhHHH
Q 029198 81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES 137 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~-----~~~~~~~~-~~k~~~e~ 137 (197)
+.. ..++.+++++++ ...+||++||..+|+.....+.+|+. +..+.+.| .+|..+|.
T Consensus 192 a~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~ 271 (442)
T PLN02206 192 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAET 271 (442)
T ss_pred eecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHH
Confidence 753 124688999998 22489999999999976555666653 33344567 99999999
Q ss_pred HHh----hcCCcEEEEccceeeCCCC---CCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 138 VLE----SKGVNWTSLRPVYIYGPLN---YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 138 ~~~----~~~~~~~i~r~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
++. ..+++++++||+++|||+. ...++..++..+.+++++.++++|++.++|+||+
T Consensus 272 ~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~ 334 (442)
T PLN02206 272 LTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS 334 (442)
T ss_pred HHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHH
Confidence 764 4689999999999999973 2356677888888888898999999999998874
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.9e-26 Score=173.66 Aligned_cols=187 Identities=22% Similarity=0.310 Sum_probs=144.8
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCcc-CCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
|||||++|.+++++|++.| ++|++++|...... ..+. .+ ...++++++.+|+.|++++.++++..++|+||
T Consensus 5 tGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi 78 (317)
T TIGR01181 5 TGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLA-----DL-EDNPRYRFVKGDIGDRELVSRLFTEHQPDAVV 78 (317)
T ss_pred EcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhh-----hh-ccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence 7999999999999999987 78999887432111 1110 00 01246888999999999999999855699999
Q ss_pred eccCCCc----------------cchHHHHHhCC--CC-CcEEEEecceecccCCCC-CCCCCCCCCCCCcc-hhhhhHH
Q 029198 78 DINGREA----------------DEVEPILDALP--NL-EQFIYCSSAGVYLKSDLL-PHCETDTVDPKSRH-KGKLNTE 136 (197)
Q Consensus 78 ~~a~~~~----------------~~~~~ll~~~~--~~-~~~v~~Ss~~vyg~~~~~-~~~e~~~~~~~~~~-~~k~~~e 136 (197)
|+|+... .++.++++++. .. .++|++||..+||..... +++|..+..|.+.| .+|..+|
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e 158 (317)
T TIGR01181 79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASD 158 (317)
T ss_pred EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHH
Confidence 9998532 12566777776 23 389999999999965432 57788777777778 9999999
Q ss_pred HHHh----hcCCcEEEEccceeeCCCCC-CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 137 SVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 137 ~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+++ +.+++++++||+.+||+... ..+++.++..+..++++++++++++.++|+|++
T Consensus 159 ~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 220 (317)
T TIGR01181 159 HLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVE 220 (317)
T ss_pred HHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHH
Confidence 8764 46899999999999999743 457778888888888888889999999998775
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=177.05 Aligned_cols=168 Identities=19% Similarity=0.202 Sum_probs=130.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|++.|++.|++|+++.+. ..+|+.|.+++.++++..++|+|||+|
T Consensus 3 tGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A 57 (306)
T PLN02725 3 AGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------------KELDLTRQADVEAFFAKEKPTYVILAA 57 (306)
T ss_pred ccCCCcccHHHHHHHHhCCCcEEEeecc-------------------------ccCCCCCHHHHHHHHhccCCCEEEEee
Confidence 7999999999999999999988866432 137899999999999877899999999
Q ss_pred CCCc-----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCC----CCCCCC-cc-hhhhhH
Q 029198 81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKS-RH-KGKLNT 135 (197)
Q Consensus 81 ~~~~-----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~----~~~~~~-~~-~~k~~~ 135 (197)
+... .++.+++++++ +++++|++||..+|+.....+.+|++ +..|.+ .| .+|..+
T Consensus 58 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~ 137 (306)
T PLN02725 58 AKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAG 137 (306)
T ss_pred eeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence 7521 13677899988 78899999999999976667788876 344544 37 999999
Q ss_pred HHHH----hhcCCcEEEEccceeeCCCCC-----CChHHHHHH----HHHcCCCccc-CCCCceeEEEEEEE
Q 029198 136 ESVL----ESKGVNWTSLRPVYIYGPLNY-----NPVEEWFFH----RLKAGRPIPI-PGSGIQVTQLGHVK 193 (197)
Q Consensus 136 e~~~----~~~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~----~~~~~~~~~~-~~~g~~~~~~i~v~ 193 (197)
|+++ +..+++++++||+++|||+.. ..+++.++. ....+.++.+ +++|.+.++|+|++
T Consensus 138 e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 209 (306)
T PLN02725 138 IKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVD 209 (306)
T ss_pred HHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHH
Confidence 9765 456899999999999999742 233444443 3456666655 78889999998864
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=176.21 Aligned_cols=187 Identities=20% Similarity=0.234 Sum_probs=141.7
Q ss_pred CCcccchHHHHHHHHHHCCCe-EEEEecCCCCcc-CCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~-V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
||||||||++++++|+++|++ |+++++...... .... . .....+++++.+|+.|.+++.++++..++|+|||
T Consensus 6 TGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 6 TGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-----D-VSDSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred ECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-----h-cccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 799999999999999999975 655665332111 0000 0 0012357889999999999999998667999999
Q ss_pred ccCCCc----------------cchHHHHHhCC-----------CCCcEEEEecceecccCC---------C-CCCCCCC
Q 029198 79 INGREA----------------DEVEPILDALP-----------NLEQFIYCSSAGVYLKSD---------L-LPHCETD 121 (197)
Q Consensus 79 ~a~~~~----------------~~~~~ll~~~~-----------~~~~~v~~Ss~~vyg~~~---------~-~~~~e~~ 121 (197)
+|+... .++.+++++++ +++++|++||..+|+... . .+++|+.
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~ 159 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT 159 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence 998631 23677887774 245899999999998531 1 2367777
Q ss_pred CCCCCCcc-hhhhhHHHHHh----hcCCcEEEEccceeeCCCCC-CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 122 ~~~~~~~~-~~k~~~e~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+..|.+.| .+|..+|.+++ .++++++++|++++|||+.. ..++..++..+..++++.++++|++.++|+||+
T Consensus 160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~ 237 (352)
T PRK10084 160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237 (352)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHH
Confidence 77888888 99999998764 46899999999999999853 356777778788888888889999999998875
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=172.97 Aligned_cols=179 Identities=30% Similarity=0.426 Sum_probs=141.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCc-cEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF-DVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~-d~vi~~ 79 (197)
||||||||++|+++|++.||+|++++|...+..... ..+.++.+|+.+.+...++.+ .. |+|||+
T Consensus 6 tG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~--~~~d~vih~ 71 (314)
T COG0451 6 TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------SGVEFVVLDLTDRDLVDELAK--GVPDAVIHL 71 (314)
T ss_pred EcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------cccceeeecccchHHHHHHHh--cCCCEEEEc
Confidence 799999999999999999999999999877633211 368899999999988888877 55 999999
Q ss_pred cCCCc-----------------cchHHHHHhCC--CCCcEEEEecceecccC-CCCCCCCC-CCCCCCCcc-hhhhhHHH
Q 029198 80 NGREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCET-DTVDPKSRH-KGKLNTES 137 (197)
Q Consensus 80 a~~~~-----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~-~~~~~~e~-~~~~~~~~~-~~k~~~e~ 137 (197)
|+... .++.+++++++ ++++||+.||..+|+.. ...+.+|+ .+..|.+.| .+|..+|+
T Consensus 72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~ 151 (314)
T COG0451 72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQ 151 (314)
T ss_pred cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHH
Confidence 88641 23677889988 89999998888877754 33367787 677777777 99999999
Q ss_pred HHhh----cCCcEEEEccceeeCCCCCCC----hHHHHHHHHHcCCC-cccCCCCceeEEEEEEE
Q 029198 138 VLES----KGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 138 ~~~~----~~~~~~i~r~~~i~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~g~~~~~~i~v~ 193 (197)
.+.. .+++++++||+++|||+.... +...++..+..+.+ +...+++.+.++++|++
T Consensus 152 ~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 216 (314)
T COG0451 152 LLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVD 216 (314)
T ss_pred HHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHH
Confidence 8754 469999999999999986543 45555666777776 55666778889998853
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=169.40 Aligned_cols=185 Identities=19% Similarity=0.249 Sum_probs=133.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccC--CCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||+||||++|++.|+++||.|.+..|++++... .+. ++.....+...+..|+.|++++..+++ +||+|||
T Consensus 12 TGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~-----~l~~a~~~l~l~~aDL~d~~sf~~ai~--gcdgVfH 84 (327)
T KOG1502|consen 12 TGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLR-----KLEGAKERLKLFKADLLDEGSFDKAID--GCDGVFH 84 (327)
T ss_pred eCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHH-----hcccCcccceEEeccccccchHHHHHh--CCCEEEE
Confidence 7999999999999999999999999999887321 111 111223458999999999999999999 9999999
Q ss_pred ccCCC---------------ccchHHHHHhCC---CCCcEEEEecceecc-c----CCCCCCCCCCCCCC------CCcc
Q 029198 79 INGRE---------------ADEVEPILDALP---NLEQFIYCSSAGVYL-K----SDLLPHCETDTVDP------KSRH 129 (197)
Q Consensus 79 ~a~~~---------------~~~~~~ll~~~~---~~~~~v~~Ss~~vyg-~----~~~~~~~e~~~~~~------~~~~ 129 (197)
+|... +.++.|+|++|+ .++|+|+.||+..-. . .+...++|+...++ ..+|
T Consensus 85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y 164 (327)
T KOG1502|consen 85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY 164 (327)
T ss_pred eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence 99872 346899999998 489999999976432 2 23345666554322 2357
Q ss_pred -hhhhhHHHHH----hhcCCcEEEEccceeeCCCCCC--ChHHHHHHHHHcCCCcccCCCCceeEEEEEEEeeeC
Q 029198 130 -KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKVRKL 197 (197)
Q Consensus 130 -~~k~~~e~~~----~~~~~~~~i~r~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~~~d~ 197 (197)
.+|..+|+.. ++.+++.+.+.|+.|+||...+ +......-...+|..-... +... -|||+|||
T Consensus 165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~-n~~~----~~VdVrDV 234 (327)
T KOG1502|consen 165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYP-NFWL----AFVDVRDV 234 (327)
T ss_pred HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCC-CCce----eeEeHHHH
Confidence 8899999853 6678999999999999998544 2223344445566422222 2121 26888885
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-25 Score=172.48 Aligned_cols=186 Identities=20% Similarity=0.270 Sum_probs=130.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+||+|++|+++|+++|++|+++.|+......... .......++++++.+|+.|.+++.++++ ++|+|||+|
T Consensus 15 tG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A 88 (338)
T PLN00198 15 IGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH----LRALQELGDLKIFGADLTDEESFEAPIA--GCDLVFHVA 88 (338)
T ss_pred ECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH----HHhcCCCCceEEEEcCCCChHHHHHHHh--cCCEEEEeC
Confidence 7999999999999999999999999987643211000 0000001358899999999999999998 899999999
Q ss_pred CCC---------------ccchHHHHHhCC---CCCcEEEEecceecccCC----CCCCCCCC---------CCCCCCcc
Q 029198 81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSD----LLPHCETD---------TVDPKSRH 129 (197)
Q Consensus 81 ~~~---------------~~~~~~ll~~~~---~~~~~v~~Ss~~vyg~~~----~~~~~e~~---------~~~~~~~~ 129 (197)
+.. ..++.++++++. ++++||++||..+|+... ..+.+|+. +..|.+.|
T Consensus 89 ~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y 168 (338)
T PLN00198 89 TPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGY 168 (338)
T ss_pred CCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchh
Confidence 842 112556788775 478999999999998432 22334431 23356668
Q ss_pred -hhhhhHHHHHh----hcCCcEEEEccceeeCCCCCC---ChHHHHHHHHHcCCCcccCC-CCce----eEEEEEEE
Q 029198 130 -KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPG-SGIQ----VTQLGHVK 193 (197)
Q Consensus 130 -~~k~~~e~~~~----~~~~~~~i~r~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~-~g~~----~~~~i~v~ 193 (197)
.+|..+|.++. +.+++++++||+++|||+... .++. ++..+..++++.+.+ ++.+ .+||+||+
T Consensus 169 ~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~ 244 (338)
T PLN00198 169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-LAMSLITGNEFLINGLKGMQMLSGSISITHVE 244 (338)
T ss_pred HHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-HHHHHHcCCccccccccccccccCCcceeEHH
Confidence 99999998764 468999999999999997422 2222 334556677666655 3333 26887765
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.7e-26 Score=167.86 Aligned_cols=154 Identities=23% Similarity=0.349 Sum_probs=131.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+||||+|.+.+|+++||.|.+++.-.......+.. ...+....+.+.++.+|++|.+.|+++|+...+|.|+|+|
T Consensus 8 tGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r--~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~Hfa 85 (343)
T KOG1371|consen 8 TGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKR--VRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVMHFA 85 (343)
T ss_pred ecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHH--HHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEEeeh
Confidence 79999999999999999999999999876654322211 0111111468999999999999999999999999999999
Q ss_pred CCC----------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCC-CCCcc-hhhhhHHHHHh
Q 029198 81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-PKSRH-KGKLNTESVLE 140 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~-~~~~~-~~k~~~e~~~~ 140 (197)
+.. +.++.++++.|+ +++++|++||+.+||.+...|++|+.+.. |.++| .+|...|+.+.
T Consensus 86 ~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~ 165 (343)
T KOG1371|consen 86 ALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIH 165 (343)
T ss_pred hhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHH
Confidence 873 346889999998 89999999999999999999999999988 88898 99999999874
Q ss_pred ----hcCCcEEEEccceeeC
Q 029198 141 ----SKGVNWTSLRPVYIYG 156 (197)
Q Consensus 141 ----~~~~~~~i~r~~~i~g 156 (197)
..++.++.+|..+++|
T Consensus 166 d~~~~~~~~~~~LRyfn~~g 185 (343)
T KOG1371|consen 166 DYNKAYGWKVTGLRYFNVIG 185 (343)
T ss_pred hhhccccceEEEEEeccccC
Confidence 4568999999999999
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.6e-26 Score=164.66 Aligned_cols=180 Identities=23% Similarity=0.309 Sum_probs=142.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||.||||+||+++|..+||+|++++.........+.- --....++.+.-|+..+ ++. .+|-|||+|
T Consensus 33 tGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~------~~~~~~fel~~hdv~~p-----l~~--evD~IyhLA 99 (350)
T KOG1429|consen 33 TGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEH------WIGHPNFELIRHDVVEP-----LLK--EVDQIYHLA 99 (350)
T ss_pred ecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcch------hccCcceeEEEeechhH-----HHH--Hhhhhhhhc
Confidence 79999999999999999999999999987664333221 11235677777777665 566 899999998
Q ss_pred CCC----------------ccchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCC-----CCCCCCcc-hhhhhHHH
Q 029198 81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES 137 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~-----~~~~~~~~-~~k~~~e~ 137 (197)
+.. ..++.+++..++ ..+||++.||+.|||++...|..|.- +..|..-| ..|..+|.
T Consensus 100 apasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~ 179 (350)
T KOG1429|consen 100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAET 179 (350)
T ss_pred cCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHH
Confidence 863 234777888777 45899999999999997666655543 22344446 88999998
Q ss_pred HH----hhcCCcEEEEccceeeCCC---CCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 138 VL----ESKGVNWTSLRPVYIYGPL---NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 138 ~~----~~~~~~~~i~r~~~i~g~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
++ ++.|+.+.|.|+.+.|||. ...+.+..+..++.+++++.++|+|.|.|+|.||+
T Consensus 180 L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvs 242 (350)
T KOG1429|consen 180 LCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVS 242 (350)
T ss_pred HHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHH
Confidence 76 4578999999999999997 23567788999999999999999999999999985
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.3e-26 Score=171.74 Aligned_cols=164 Identities=26% Similarity=0.326 Sum_probs=126.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+|++|++|.+.|.++|++|+++.|. ..|+.|.+.+.+.++..+||+|||||
T Consensus 6 ~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------------~~dl~d~~~~~~~~~~~~pd~Vin~a 59 (286)
T PF04321_consen 6 TGASGFLGSALARALKERGYEVIATSRS--------------------------DLDLTDPEAVAKLLEAFKPDVVINCA 59 (286)
T ss_dssp ETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------------CS-TTSHHHHHHHHHHH--SEEEE--
T ss_pred ECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------------hcCCCCHHHHHHHHHHhCCCeEeccc
Confidence 6999999999999999999999999775 35789999999999878899999999
Q ss_pred CCCc----------------cchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhc
Q 029198 81 GREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~ 142 (197)
+.+. ..+.++.+++. ...++||+||..||+.....+++|++++.|.+.| ++|..+|+.+++.
T Consensus 60 a~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~ 139 (286)
T PF04321_consen 60 AYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAA 139 (286)
T ss_dssp ----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH
T ss_pred eeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 8742 34677888887 5579999999999988878889999999999998 9999999999886
Q ss_pred CCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.-++.|+|++++||+ ...+++.++++.+.+++.+.++. ++.++++|++
T Consensus 140 ~~~~~IlR~~~~~g~-~~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~ 187 (286)
T PF04321_consen 140 CPNALILRTSWVYGP-SGRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVD 187 (286)
T ss_dssp -SSEEEEEE-SEESS-SSSSHHHHHHHHHHCTSEEEEES--SCEE--EEHH
T ss_pred cCCEEEEecceeccc-CCCchhhhHHHHHhcCCeeEeeC--CceeCCEEHH
Confidence 679999999999999 45678999999999999988865 5677887764
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-25 Score=173.00 Aligned_cols=183 Identities=19% Similarity=0.275 Sum_probs=130.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+||+|++++++|+++|++|++++|+.+...... ...+.....+++++.+|+.|.+++.++++ ++|+|||+|
T Consensus 16 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~A 89 (342)
T PLN02214 16 TGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTH----LRELEGGKERLILCKADLQDYEALKAAID--GCDGVFHTA 89 (342)
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHH----HHHhhCCCCcEEEEecCcCChHHHHHHHh--cCCEEEEec
Confidence 799999999999999999999999999765321000 00011112358889999999999999998 899999999
Q ss_pred CCCc-----------cchHHHHHhCC--CCCcEEEEecc-eecccCCC---CCCCCCC------CCCCCCcc-hhhhhHH
Q 029198 81 GREA-----------DEVEPILDALP--NLEQFIYCSSA-GVYLKSDL---LPHCETD------TVDPKSRH-KGKLNTE 136 (197)
Q Consensus 81 ~~~~-----------~~~~~ll~~~~--~~~~~v~~Ss~-~vyg~~~~---~~~~e~~------~~~~~~~~-~~k~~~e 136 (197)
+... .++.+++++++ ++++||++||. .+||.... .+++|++ +..|.+.| .+|..+|
T Consensus 90 ~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE 169 (342)
T PLN02214 90 SPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAE 169 (342)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHH
Confidence 8642 34778899887 78899999996 58875332 2466664 22355667 9999999
Q ss_pred HHHh----hcCCcEEEEccceeeCCCCCCC---hHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 137 SVLE----SKGVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 137 ~~~~----~~~~~~~i~r~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+++. +.+++++++||+++|||+.... .+..++ .+..++... ++ ++.++|+||+
T Consensus 170 ~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~~-~~--~~~~~~i~V~ 229 (342)
T PLN02214 170 QAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAKT-YA--NLTQAYVDVR 229 (342)
T ss_pred HHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-CC--CCCcCeeEHH
Confidence 9864 4689999999999999974322 222333 334555432 33 4567886653
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-24 Score=167.59 Aligned_cols=191 Identities=20% Similarity=0.284 Sum_probs=139.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhh-hccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|+++|++|++++|............ .... ....+++++.+|+.|++++.++++..++|+|||+
T Consensus 11 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~vih~ 88 (352)
T PLN02240 11 TGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRV--KELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAVIHF 88 (352)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHH--HHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEEEEc
Confidence 799999999999999999999999998643211000000 0000 0124688999999999999999876689999999
Q ss_pred cCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh
Q 029198 80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE 140 (197)
Q Consensus 80 a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~ 140 (197)
|+... .++.+++++++ ++++||++||..+|+.....+++|+.+..|.+.| .+|..+|++++
T Consensus 89 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~ 168 (352)
T PLN02240 89 AGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICR 168 (352)
T ss_pred cccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 98532 23567888887 6789999999999987666778898888888888 99999999874
Q ss_pred h-----cCCcEEEEccceeeCCCCC----------CChHHHHHHHHHcCC--CcccCC------CCceeEEEEEEE
Q 029198 141 S-----KGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLKAGR--PIPIPG------SGIQVTQLGHVK 193 (197)
Q Consensus 141 ~-----~~~~~~i~r~~~i~g~~~~----------~~~~~~~~~~~~~~~--~~~~~~------~g~~~~~~i~v~ 193 (197)
. .+++++++|++++||++.. ...+..++..+..++ .+.+++ +|.+.++|+|++
T Consensus 169 ~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 244 (352)
T PLN02240 169 DIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVM 244 (352)
T ss_pred HHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHH
Confidence 2 4688999999999997421 111222344444443 344443 678999998875
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-24 Score=159.91 Aligned_cols=162 Identities=23% Similarity=0.218 Sum_probs=143.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||++|++|++|.+.|. .+++|++++|.. .|++|++.+.+++.+.+||+|||+|
T Consensus 6 ~G~~GqLG~~L~~~l~-~~~~v~a~~~~~--------------------------~Ditd~~~v~~~i~~~~PDvVIn~A 58 (281)
T COG1091 6 TGANGQLGTELRRALP-GEFEVIATDRAE--------------------------LDITDPDAVLEVIRETRPDVVINAA 58 (281)
T ss_pred EcCCChHHHHHHHHhC-CCceEEeccCcc--------------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence 7999999999999998 779999999853 5899999999999988999999999
Q ss_pred CCCc----------------cchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhc
Q 029198 81 GREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~ 142 (197)
+++. .+..++.++++ --.++||+||..||+.....++.|++.+.|.+.| ++|+..|..+++.
T Consensus 59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~ 138 (281)
T COG1091 59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAA 138 (281)
T ss_pred cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHh
Confidence 9853 23678888888 4469999999999998888899999999999999 9999999999999
Q ss_pred CCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEE
Q 029198 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (197)
Q Consensus 143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 192 (197)
+.+.+|+|.+|+||... .+++..+++...+++++.++. +|..+++|+
T Consensus 139 ~~~~~I~Rtswv~g~~g-~nFv~tml~la~~~~~l~vv~--Dq~gsPt~~ 185 (281)
T COG1091 139 GPRHLILRTSWVYGEYG-NNFVKTMLRLAKEGKELKVVD--DQYGSPTYT 185 (281)
T ss_pred CCCEEEEEeeeeecCCC-CCHHHHHHHHhhcCCceEEEC--CeeeCCccH
Confidence 99999999999999954 678899999999999988875 576666554
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-24 Score=166.75 Aligned_cols=187 Identities=24% Similarity=0.340 Sum_probs=135.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|+++|++|++++|..+.....+ ..+.. ...++.++.+|+.|.+++.++++..++|+|||+
T Consensus 6 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 6 TGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVL-----PVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred ECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHH-----HHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 799999999999999999999999987543321110 00111 123577889999999999998876679999999
Q ss_pred cCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCC-CCCCcc-hhhhhHHHHH
Q 029198 80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-DPKSRH-KGKLNTESVL 139 (197)
Q Consensus 80 a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~-~~~~~~-~~k~~~e~~~ 139 (197)
|+... .++.+++++++ ++++||++||..+|+.....+++|+++. .|...| .+|..+|+++
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~ 160 (338)
T PRK10675 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160 (338)
T ss_pred CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence 97532 13567888887 7889999999999997666678888775 566778 8999999987
Q ss_pred hh-----cCCcEEEEccceeeCCCC------C-----CChHHHHHHHHHcCC--CcccCC------CCceeEEEEEEE
Q 029198 140 ES-----KGVNWTSLRPVYIYGPLN------Y-----NPVEEWFFHRLKAGR--PIPIPG------SGIQVTQLGHVK 193 (197)
Q Consensus 140 ~~-----~~~~~~i~r~~~i~g~~~------~-----~~~~~~~~~~~~~~~--~~~~~~------~g~~~~~~i~v~ 193 (197)
++ .+++++++|++++||+.. . ..+... +..+..++ .+.+++ +|++.++|+||+
T Consensus 161 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~ 237 (338)
T PRK10675 161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPY-IAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_pred HHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHH-HHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHH
Confidence 53 378999999999999731 0 122333 33343332 233333 678899998875
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=168.42 Aligned_cols=184 Identities=16% Similarity=0.172 Sum_probs=129.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++++++|+++|++|++++|+....... .. ...+....++++++.+|+.|++.+.++++ ++|+|||+|
T Consensus 10 tGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A 84 (322)
T PLN02662 10 TGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EH--LLALDGAKERLHLFKANLLEEGSFDSVVD--GCEGVFHTA 84 (322)
T ss_pred ECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HH--HHhccCCCCceEEEeccccCcchHHHHHc--CCCEEEEeC
Confidence 79999999999999999999999999975431100 00 00000112468999999999999999998 899999999
Q ss_pred CCC---------------ccchHHHHHhCC---CCCcEEEEecce--ecccC---CCCCCCCCCCCCCC------Ccc-h
Q 029198 81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAG--VYLKS---DLLPHCETDTVDPK------SRH-K 130 (197)
Q Consensus 81 ~~~---------------~~~~~~ll~~~~---~~~~~v~~Ss~~--vyg~~---~~~~~~e~~~~~~~------~~~-~ 130 (197)
+.. ..++.+++++++ ++++||++||.+ +|+.. ...+.+|+.+..|. +.| .
T Consensus 85 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~ 164 (322)
T PLN02662 85 SPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVL 164 (322)
T ss_pred CcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHH
Confidence 752 123567888765 568999999976 46532 22356676554442 357 8
Q ss_pred hhhhHHHHH----hhcCCcEEEEccceeeCCCCCC--ChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 131 ~k~~~e~~~----~~~~~~~~i~r~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+|..+|.++ ++.+++++++||+++|||+... .....++..+..+++. ++ .+.++|+||+
T Consensus 165 sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~i~v~ 229 (322)
T PLN02662 165 SKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT--FP--NASYRWVDVR 229 (322)
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc--CC--CCCcCeEEHH
Confidence 999999876 4569999999999999997432 2334445555556542 22 4568887764
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.5e-24 Score=162.96 Aligned_cols=184 Identities=19% Similarity=0.249 Sum_probs=144.9
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||+||+|.+|+++|++++ .+|.+++..+......... .......++.+.+|+.|..++..++. ++ .|+|
T Consensus 10 tGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~-----~~~~~~~v~~~~~D~~~~~~i~~a~~--~~-~Vvh 81 (361)
T KOG1430|consen 10 TGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAEL-----TGFRSGRVTVILGDLLDANSISNAFQ--GA-VVVH 81 (361)
T ss_pred ECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhh-----hcccCCceeEEecchhhhhhhhhhcc--Cc-eEEE
Confidence 7999999999999999998 8999999987632111100 00013679999999999999999999 88 7777
Q ss_pred ccCC----------------CccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCC---Ccc-hhhhhHH
Q 029198 79 INGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK---SRH-KGKLNTE 136 (197)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~---~~~-~~k~~~e 136 (197)
+|+. ++.++++++++|. +++++||.||..|..........+++.+.|. ++| .+|..+|
T Consensus 82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE 161 (361)
T KOG1430|consen 82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE 161 (361)
T ss_pred eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence 7654 3567999999999 9999999999998765444333344444443 367 9999999
Q ss_pred HHHhhc----CCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 137 SVLESK----GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 137 ~~~~~~----~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
++..+. .+..+.+||+.||||++ ..+++.+...++.|+.+...++++.+.||+|++
T Consensus 162 ~~Vl~an~~~~l~T~aLR~~~IYGpgd-~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~ 221 (361)
T KOG1430|consen 162 KLVLEANGSDDLYTCALRPPGIYGPGD-KRLLPKIVEALKNGGFLFKIGDGENLNDFTYGE 221 (361)
T ss_pred HHHHHhcCCCCeeEEEEccccccCCCC-ccccHHHHHHHHccCceEEeeccccccceEEec
Confidence 987543 28899999999999975 556788889999999888889999999999987
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.4e-24 Score=165.99 Aligned_cols=184 Identities=16% Similarity=0.158 Sum_probs=130.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+||||++++++|+++|++|++++|+......... .........+++++.+|+.|.+++.++++ ++|+|||+|
T Consensus 11 tG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih~A 85 (325)
T PLN02989 11 TGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDH---LLALDGAKERLKLFKADLLDEGSFELAID--GCETVFHTA 85 (325)
T ss_pred ECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHH---HHhccCCCCceEEEeCCCCCchHHHHHHc--CCCEEEEeC
Confidence 7999999999999999999999999988654211000 00000112468899999999999999998 899999999
Q ss_pred CCCc----------------cchHHHHHhCC---CCCcEEEEecceecccC-----CCCCCCCCCCCCCC------Ccc-
Q 029198 81 GREA----------------DEVEPILDALP---NLEQFIYCSSAGVYLKS-----DLLPHCETDTVDPK------SRH- 129 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~---~~~~~v~~Ss~~vyg~~-----~~~~~~e~~~~~~~------~~~- 129 (197)
+... .++.++++++. +.++||++||..+|+.. ...+.+|+.+..|. +.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~ 165 (325)
T PLN02989 86 SPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYV 165 (325)
T ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchH
Confidence 8521 12556777765 35799999998876542 23356777766542 457
Q ss_pred hhhhhHHHHHh----hcCCcEEEEccceeeCCCCCC--ChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 130 ~~k~~~e~~~~----~~~~~~~i~r~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+|..+|.++. ..+++++++||+++|||+... .+...++..+.+++.. ++ .+.++|+||+
T Consensus 166 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~--~~--~~~r~~i~v~ 231 (325)
T PLN02989 166 LSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP--FN--TTHHRFVDVR 231 (325)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC--CC--CcCcCeeEHH
Confidence 99999998764 468999999999999997533 2444555566666543 22 3457887764
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=168.92 Aligned_cols=186 Identities=18% Similarity=0.206 Sum_probs=125.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++++++|+++|++|++++|+.......... ........+++++.+|+.|.+.+.++++ ++|+|||+|
T Consensus 11 TGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~v~~Dl~d~~~~~~~~~--~~d~ViH~A 85 (351)
T PLN02650 11 TGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHL---LDLPGATTRLTLWKADLAVEGSFDDAIR--GCTGVFHVA 85 (351)
T ss_pred eCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHH---HhccCCCCceEEEEecCCChhhHHHHHh--CCCEEEEeC
Confidence 79999999999999999999999999975442110000 0000011358899999999999999998 899999999
Q ss_pred CCCc---------------cchHHHHHhCC--C-CCcEEEEecceecccC-CCCC-CCCCCC---------CCCCCcc-h
Q 029198 81 GREA---------------DEVEPILDALP--N-LEQFIYCSSAGVYLKS-DLLP-HCETDT---------VDPKSRH-K 130 (197)
Q Consensus 81 ~~~~---------------~~~~~ll~~~~--~-~~~~v~~Ss~~vyg~~-~~~~-~~e~~~---------~~~~~~~-~ 130 (197)
+... .++.+++++++ + +++||++||.++|+.. ...+ ++|+.. ..|.+.| .
T Consensus 86 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~ 165 (351)
T PLN02650 86 TPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFV 165 (351)
T ss_pred CCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHH
Confidence 7521 13567888887 4 6899999999776543 2222 345421 1233467 9
Q ss_pred hhhhHHHHH----hhcCCcEEEEccceeeCCCCCCChHHHHHHHH--HcCCCcccCCCCceeEEEEEEE
Q 029198 131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL--KAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 131 ~k~~~e~~~----~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+|..+|.++ ++++++++++||+++|||++.......++..+ ..++.. .++.. +.++|+||+
T Consensus 166 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~r~~v~V~ 232 (351)
T PLN02650 166 SKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEA-HYSII-KQGQFVHLD 232 (351)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCcc-ccCcC-CCcceeeHH
Confidence 999999876 34689999999999999975333323233222 233322 12222 347887764
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-23 Score=161.10 Aligned_cols=180 Identities=21% Similarity=0.277 Sum_probs=132.5
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc--cCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~--~~~d~vi 77 (197)
||||||+|+++++.|++.|+ +|++++|..... .+. + .....+..|+.+.+.++.+.+. .++|+||
T Consensus 4 tGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~--------~--~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv 71 (314)
T TIGR02197 4 TGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFL--------N--LADLVIADYIDKEDFLDRLEKGAFGKIEAIF 71 (314)
T ss_pred eCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhh--------h--hhheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence 79999999999999999997 798888765431 110 0 0113566788888877766541 4899999
Q ss_pred eccCCC--------------ccchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCC-CCCCcc-hhhhhHHHHHh
Q 029198 78 DINGRE--------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-DPKSRH-KGKLNTESVLE 140 (197)
Q Consensus 78 ~~a~~~--------------~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~-~~~~~~-~~k~~~e~~~~ 140 (197)
|+|+.. ..++.+++++++ ...+||++||..+|+.... +.+|++++ .|.+.| .+|..+|.+++
T Consensus 72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e~~~~ 150 (314)
T TIGR02197 72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFDQYVR 150 (314)
T ss_pred ECccccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHHHHHH
Confidence 999853 123677888887 3348999999999986543 45665543 477778 99999998875
Q ss_pred h------cCCcEEEEccceeeCCCCC-----CChHHHHHHHHHcCCCcccC------CCCceeEEEEEEE
Q 029198 141 S------KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIP------GSGIQVTQLGHVK 193 (197)
Q Consensus 141 ~------~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~i~v~ 193 (197)
+ .+++++++||+.+|||+.. ..++..++..+.+++++.++ ++|++.++|+|++
T Consensus 151 ~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 220 (314)
T TIGR02197 151 RRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVK 220 (314)
T ss_pred HHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHH
Confidence 3 3579999999999999742 24566677777788776654 4678889998875
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.4e-24 Score=164.69 Aligned_cols=184 Identities=17% Similarity=0.217 Sum_probs=129.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++++++|+++|++|+++.|+.......... ........+++++.+|+.|++.+.++++ ++|+|||+|
T Consensus 11 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~A 85 (322)
T PLN02986 11 TGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHL---LALDGAKERLKLFKADLLEESSFEQAIE--GCDAVFHTA 85 (322)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHH---HhccCCCCceEEEecCCCCcchHHHHHh--CCCEEEEeC
Confidence 79999999999999999999999999976542110000 0000012468999999999999999998 899999999
Q ss_pred CCC---------------ccchHHHHHhCC---CCCcEEEEecceec--ccC---CCCCCCCCCCCCC------CCcc-h
Q 029198 81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAGVY--LKS---DLLPHCETDTVDP------KSRH-K 130 (197)
Q Consensus 81 ~~~---------------~~~~~~ll~~~~---~~~~~v~~Ss~~vy--g~~---~~~~~~e~~~~~~------~~~~-~ 130 (197)
+.. ..++.+++++++ ++++||++||..+| +.. ...+++|++...| .+.| .
T Consensus 86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~ 165 (322)
T PLN02986 86 SPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPL 165 (322)
T ss_pred CCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHH
Confidence 852 113567788876 47899999998754 432 2234666654332 4557 9
Q ss_pred hhhhHHHHH----hhcCCcEEEEccceeeCCCCCC--ChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 131 ~k~~~e~~~----~~~~~~~~i~r~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+|..+|..+ ++++++++++||+++|||.... .+...++..+..++++ ++ .+.++|+||+
T Consensus 166 sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~ 230 (322)
T PLN02986 166 SKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FN--NRFYRFVDVR 230 (322)
T ss_pred HHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CC--CcCcceeEHH
Confidence 999999865 4478999999999999996432 2334455566666653 33 4567886653
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-23 Score=159.10 Aligned_cols=187 Identities=22% Similarity=0.348 Sum_probs=136.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||++|.+++++|++.|++|++++|........... ... ...++++.+|+.+.+++.++++..++|+|||++
T Consensus 5 ~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a 78 (328)
T TIGR01179 5 TGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKR-----GER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA 78 (328)
T ss_pred eCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhh-----hcc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence 79999999999999999999999987654332111110 000 125778899999999999998766899999999
Q ss_pred CCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhh
Q 029198 81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~ 141 (197)
+... .++.++++++. +++++|++||..+|+.....+++|+++..|...| .+|..+|.+++.
T Consensus 79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~ 158 (328)
T TIGR01179 79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRD 158 (328)
T ss_pred cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHH
Confidence 8531 23566777776 6789999999999987766678888887787778 999999987743
Q ss_pred -----cCCcEEEEccceeeCCCCC----------CChHHHHHHHHH-cCCCcccC------CCCceeEEEEEEE
Q 029198 142 -----KGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLK-AGRPIPIP------GSGIQVTQLGHVK 193 (197)
Q Consensus 142 -----~~~~~~i~r~~~i~g~~~~----------~~~~~~~~~~~~-~~~~~~~~------~~g~~~~~~i~v~ 193 (197)
.+++++++||+.+||+... ..++..+..... ...++.++ ++|.+.++|+|++
T Consensus 159 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~ 232 (328)
T TIGR01179 159 LSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVM 232 (328)
T ss_pred HHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHH
Confidence 6899999999999998421 223444444433 22333332 3567888997764
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=169.48 Aligned_cols=191 Identities=14% Similarity=0.129 Sum_probs=133.1
Q ss_pred CCcccchHHHHHHHHHHCC---CeEEEEecCCCCccC--CCC-CCCch----hhhh---------ccCceEEEeecCC--
Q 029198 1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQ--QLP-GESDQ----EFAE---------FSSKILHLKGDRK-- 59 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g---~~V~~~~r~~~~~~~--~~~-~~~~~----~~~~---------~~~~~~~~~~d~~-- 59 (197)
||||||+|++|+++|++.+ .+|+++.|....... .+. ..... .+.+ ...+++++.+|+.
T Consensus 17 TGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~ 96 (491)
T PLN02996 17 TGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYD 96 (491)
T ss_pred eCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCCc
Confidence 8999999999999999864 378999997654211 100 00000 0000 0157899999998
Q ss_pred -----CHHHHHhhhhccCccEEEeccCCC-------------ccchHHHHHhCC---CCCcEEEEecceecccCCC----
Q 029198 60 -----DYDFVKSSLSAKGFDVVYDINGRE-------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSDL---- 114 (197)
Q Consensus 60 -----~~~~l~~~~~~~~~d~vi~~a~~~-------------~~~~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~---- 114 (197)
+.+.++++++ ++|+|||+|+.. +.++.+++++++ +++++|++||..+||....
T Consensus 97 ~LGLs~~~~~~~l~~--~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~~i~E 174 (491)
T PLN02996 97 DLGVKDSNLREEMWK--EIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILE 174 (491)
T ss_pred CCCCChHHHHHHHHh--CCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCceeee
Confidence 4455677777 899999999863 235788898886 5789999999999986321
Q ss_pred CCCCCCC-----------------------------------------------CCCCCCcc-hhhhhHHHHHhh--cCC
Q 029198 115 LPHCETD-----------------------------------------------TVDPKSRH-KGKLNTESVLES--KGV 144 (197)
Q Consensus 115 ~~~~e~~-----------------------------------------------~~~~~~~~-~~k~~~e~~~~~--~~~ 144 (197)
.++.+.. ...+.+.| .+|..+|+++.+ .++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~~l 254 (491)
T PLN02996 175 KPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKENL 254 (491)
T ss_pred ecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcCCC
Confidence 1111100 01122447 999999999865 489
Q ss_pred cEEEEccceeeCCCCCC--ChH------HHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 145 NWTSLRPVYIYGPLNYN--PVE------EWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 145 ~~~i~r~~~i~g~~~~~--~~~------~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+++++||+++||+.+.+ .++ ..++..+.+|....++++|++.+|++|||
T Consensus 255 pv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vd 311 (491)
T PLN02996 255 PLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPAD 311 (491)
T ss_pred CEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceeccc
Confidence 99999999999987422 222 33455556777777889999999999987
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.2e-23 Score=158.25 Aligned_cols=177 Identities=20% Similarity=0.294 Sum_probs=129.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+|++|+++++.|+++|++|++++|+++.... +. ..+++++.+|+.|.+++.++++ ++|+|||++
T Consensus 6 tG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~----------~~~~~~~~~D~~~~~~l~~~~~--~~d~vi~~a 72 (328)
T TIGR03466 6 TGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN-LE----------GLDVEIVEGDLRDPASLRKAVA--GCRALFHVA 72 (328)
T ss_pred ECCccchhHHHHHHHHHCCCEEEEEEecCccccc-cc----------cCCceEEEeeCCCHHHHHHHHh--CCCEEEEec
Confidence 7999999999999999999999999998655221 11 1368899999999999999998 899999998
Q ss_pred CCC--------------ccchHHHHHhCC--CCCcEEEEecceeccc-CCCCCCCCCCCCCCC---Ccc-hhhhhHHHHH
Q 029198 81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPK---SRH-KGKLNTESVL 139 (197)
Q Consensus 81 ~~~--------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~-~~~~~~~e~~~~~~~---~~~-~~k~~~e~~~ 139 (197)
+.. ..++.+++++++ +++++|++||..+|+. ....+++|+.+..+. ..| .+|..+|+++
T Consensus 73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~ 152 (328)
T TIGR03466 73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAA 152 (328)
T ss_pred eecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHH
Confidence 642 123567888877 6889999999999985 344567777665553 357 8999999887
Q ss_pred hh----cCCcEEEEccceeeCCCCCC-ChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 140 ES----KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 140 ~~----~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+. .+++++++||+.+||++... .....++.....++.....+ ...+|+|++
T Consensus 153 ~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~v~ 208 (328)
T TIGR03466 153 LEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVD---TGLNLVHVD 208 (328)
T ss_pred HHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeC---CCcceEEHH
Confidence 53 58999999999999997432 22233344433443222222 235676643
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-23 Score=162.77 Aligned_cols=152 Identities=20% Similarity=0.269 Sum_probs=113.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+||||++++++|+++|++|++++|+......... .+. ...+++++.+|+.|.+++.++++ ++|+|||+|
T Consensus 16 tG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A 87 (353)
T PLN02896 16 TGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLS-----KWK-EGDRLRLFRADLQEEGSFDEAVK--GCDGVFHVA 87 (353)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----hhc-cCCeEEEEECCCCCHHHHHHHHc--CCCEEEECC
Confidence 7999999999999999999999999987543211100 000 12468899999999999999988 899999999
Q ss_pred CCCc-----------------------cchHHHHHhCC--C-CCcEEEEecceecccCCC-----CCCCCCCCC------
Q 029198 81 GREA-----------------------DEVEPILDALP--N-LEQFIYCSSAGVYLKSDL-----LPHCETDTV------ 123 (197)
Q Consensus 81 ~~~~-----------------------~~~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~-----~~~~e~~~~------ 123 (197)
+... .++.+++++++ + +++||++||..+||.... .+++|+.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~ 167 (353)
T PLN02896 88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW 167 (353)
T ss_pred ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence 8631 12456778775 3 789999999999985321 245554211
Q ss_pred ---CCCCcc-hhhhhHHHHH----hhcCCcEEEEccceeeCCCCC
Q 029198 124 ---DPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY 160 (197)
Q Consensus 124 ---~~~~~~-~~k~~~e~~~----~~~~~~~~i~r~~~i~g~~~~ 160 (197)
.+...| .+|..+|+++ +..+++++++||+++|||+..
T Consensus 168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~ 212 (353)
T PLN02896 168 NTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLT 212 (353)
T ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcC
Confidence 123367 9999999976 346899999999999999753
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.9e-23 Score=158.23 Aligned_cols=167 Identities=19% Similarity=0.286 Sum_probs=127.7
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||+|++|++++++|+++| ++|++++|+...... +. ..+ ...++.++.+|+.|++.+.++++ ++|+|||
T Consensus 10 TGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~-~~----~~~--~~~~~~~v~~Dl~d~~~l~~~~~--~iD~Vih 80 (324)
T TIGR03589 10 TGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWE-MQ----QKF--PAPCLRFFIGDVRDKERLTRALR--GVDYVVH 80 (324)
T ss_pred eCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHH-HH----HHh--CCCcEEEEEccCCCHHHHHHHHh--cCCEEEE
Confidence 7999999999999999986 799999987543211 00 000 01468899999999999999998 8999999
Q ss_pred ccCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHH
Q 029198 79 INGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL 139 (197)
Q Consensus 79 ~a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~ 139 (197)
+|+... .++.+++++++ ++++||++||... ..|.++| .+|..+|.++
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~--------------~~p~~~Y~~sK~~~E~l~ 146 (324)
T TIGR03589 81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA--------------ANPINLYGATKLASDKLF 146 (324)
T ss_pred CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC--------------CCCCCHHHHHHHHHHHHH
Confidence 998631 13667888887 6789999998532 2345567 9999999876
Q ss_pred h-------hcCCcEEEEccceeeCCCCCCChHHHHHHHHHcCC-CcccCCCCceeEEEEEEE
Q 029198 140 E-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 140 ~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~i~v~ 193 (197)
+ ..+++++++|||++|||+. .+++.+...+..++ ++++. ++++.++|+||+
T Consensus 147 ~~~~~~~~~~gi~~~~lR~g~v~G~~~--~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~v~ 205 (324)
T TIGR03589 147 VAANNISGSKGTRFSVVRYGNVVGSRG--SVVPFFKSLKEEGVTELPIT-DPRMTRFWITLE 205 (324)
T ss_pred HHHHhhccccCcEEEEEeecceeCCCC--CcHHHHHHHHHhCCCCeeeC-CCCceEeeEEHH
Confidence 3 3689999999999999953 56777777777776 56654 678889997764
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.1e-24 Score=159.14 Aligned_cols=190 Identities=21% Similarity=0.187 Sum_probs=107.1
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEecCCCCc--cC----CCCCCCch-hh-hhccCceEEEeecCCCH------HHH
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPI--AQ----QLPGESDQ-EF-AEFSSKILHLKGDRKDY------DFV 64 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r~~~~~--~~----~~~~~~~~-~~-~~~~~~~~~~~~d~~~~------~~l 64 (197)
||||||+|++|+++|++.+. +|+.+.|.++.. .+ .+...... .. .....+++++.+|+.++ +..
T Consensus 2 TGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~~ 81 (249)
T PF07993_consen 2 TGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDEDY 81 (249)
T ss_dssp E-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHHH
T ss_pred cCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHHh
Confidence 79999999999999999986 999999987541 11 11111100 00 02357899999999974 456
Q ss_pred HhhhhccCccEEEeccCCC-------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCC-------CC-
Q 029198 65 KSSLSAKGFDVVYDINGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE-------TD- 121 (197)
Q Consensus 65 ~~~~~~~~~d~vi~~a~~~-------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e-------~~- 121 (197)
..+.+ .+|+|||+|+.. +.+++++++.+. +.++|+|+||..+.+.... ...| ..
T Consensus 82 ~~L~~--~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~-~~~~~~~~~~~~~~ 158 (249)
T PF07993_consen 82 QELAE--EVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPG-TIEEKVYPEEEDDL 158 (249)
T ss_dssp HHHHH--H--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TT-T--SSS-HHH--EE
T ss_pred hcccc--ccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCC-cccccccccccccc
Confidence 66666 899999999862 456899999988 5569999999555543332 1111 11
Q ss_pred --CCCCCCcc-hhhhhHHHHHhh----cCCcEEEEccceeeCCC-----CCCC-hHHHHHHHHHcCCCcccCCCCceeEE
Q 029198 122 --TVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPL-----NYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQ 188 (197)
Q Consensus 122 --~~~~~~~~-~~k~~~e~~~~~----~~~~~~i~r~~~i~g~~-----~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~ 188 (197)
.....+.| .+|+.+|+++++ .+++++|+|||.|+|.. +... +...+...+..+.....+++.+...|
T Consensus 159 ~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d 238 (249)
T PF07993_consen 159 DPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLD 238 (249)
T ss_dssp E--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--
T ss_pred hhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEe
Confidence 11223457 999999999853 38999999999999932 2233 23334445555654445555556689
Q ss_pred EEEEE
Q 029198 189 LGHVK 193 (197)
Q Consensus 189 ~i~v~ 193 (197)
++.||
T Consensus 239 ~vPVD 243 (249)
T PF07993_consen 239 LVPVD 243 (249)
T ss_dssp EEEHH
T ss_pred EECHH
Confidence 98887
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=159.56 Aligned_cols=185 Identities=18% Similarity=0.264 Sum_probs=126.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh---ccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
|||+||+|++++++|+++|++|+++.|+.+.... +... ..+.+ ...++.++.+|+.|.+++.++++ ++|.||
T Consensus 59 TGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~-l~~l--~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~--~~d~V~ 133 (367)
T PLN02686 59 TGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEK-LREM--EMFGEMGRSNDGIWTVMANLTEPESLHEAFD--GCAGVF 133 (367)
T ss_pred ECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHH--hhhccccccCCceEEEEcCCCCHHHHHHHHH--hccEEE
Confidence 7999999999999999999999999887543211 0000 00000 01357889999999999999998 799999
Q ss_pred eccCCC----------------ccchHHHHHhCC---CCCcEEEEecc--eecccC--CC--CCCCCCC------CCCCC
Q 029198 78 DINGRE----------------ADEVEPILDALP---NLEQFIYCSSA--GVYLKS--DL--LPHCETD------TVDPK 126 (197)
Q Consensus 78 ~~a~~~----------------~~~~~~ll~~~~---~~~~~v~~Ss~--~vyg~~--~~--~~~~e~~------~~~~~ 126 (197)
|+++.. ..++.+++++++ ++++||++||. .+|+.. .. .+++|+. +..|.
T Consensus 134 hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~ 213 (367)
T PLN02686 134 HTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNK 213 (367)
T ss_pred ecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhccccc
Confidence 998642 123678999986 58999999996 477642 11 2244443 23345
Q ss_pred Ccc-hhhhhHHHHHh----hcCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEEeee
Q 029198 127 SRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKVRK 196 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~----~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~~~d 196 (197)
++| .+|..+|.++. ..+++++++||+++|||+........++. +..+. +.++++|. ++|+| ++|
T Consensus 214 ~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~-~~~g~-~~~~g~g~--~~~v~--V~D 282 (367)
T PLN02686 214 LWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIA-YLKGA-QEMLADGL--LATAD--VER 282 (367)
T ss_pred chHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHH-HhcCC-CccCCCCC--cCeEE--HHH
Confidence 567 99999999863 46899999999999999753322222333 34454 45666654 35655 555
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5e-23 Score=158.99 Aligned_cols=161 Identities=19% Similarity=0.209 Sum_probs=119.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++++++|+++||+|++++|+.++.. .+. ..+++++.+|+.|++++.++++ ++|+|||++
T Consensus 6 tGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-~l~----------~~~v~~v~~Dl~d~~~l~~al~--g~d~Vi~~~ 72 (317)
T CHL00194 6 IGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-FLK----------EWGAELVYGDLSLPETLPPSFK--GVTAIIDAS 72 (317)
T ss_pred ECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-hHh----------hcCCEEEECCCCCHHHHHHHHC--CCCEEEECC
Confidence 799999999999999999999999999864421 111 1368999999999999999998 899999987
Q ss_pred CCCc-----------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhcCCcE
Q 029198 81 GREA-----------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNW 146 (197)
Q Consensus 81 ~~~~-----------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~ 146 (197)
+... .++.+++++++ ++++||++||.+.... +..++ .+|..+|+++++.++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~-------------~~~~~~~~K~~~e~~l~~~~l~~ 139 (317)
T CHL00194 73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQY-------------PYIPLMKLKSDIEQKLKKSGIPY 139 (317)
T ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccccc-------------CCChHHHHHHHHHHHHHHcCCCe
Confidence 6421 23578999988 8899999998644210 11234 78999999999999999
Q ss_pred EEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 147 ~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+++||+.+|+. ++..+...+..++++.+ +++.+.++|+|++
T Consensus 140 tilRp~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~ 180 (317)
T CHL00194 140 TIFRLAGFFQG-----LISQYAIPILEKQPIWI-TNESTPISYIDTQ 180 (317)
T ss_pred EEEeecHHhhh-----hhhhhhhhhccCCceEe-cCCCCccCccCHH
Confidence 99999988864 12222222334455444 3445667776643
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-23 Score=146.89 Aligned_cols=142 Identities=33% Similarity=0.504 Sum_probs=116.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+||||++|+.++++|+++|++|++++|++++... .++++++.+|+.|++++.++++ ++|+||+++
T Consensus 4 ~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------------~~~~~~~~~d~~d~~~~~~al~--~~d~vi~~~ 68 (183)
T PF13460_consen 4 FGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------------SPGVEIIQGDLFDPDSVKAALK--GADAVIHAA 68 (183)
T ss_dssp ETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------------CTTEEEEESCTTCHHHHHHHHT--TSSEEEECC
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------------ccccccceeeehhhhhhhhhhh--hcchhhhhh
Confidence 6999999999999999999999999999776332 3689999999999999999999 999999999
Q ss_pred CCC---ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcchhhhhHHHHHhhcCCcEEEEccceee
Q 029198 81 GRE---ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIY 155 (197)
Q Consensus 81 ~~~---~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~i~r~~~i~ 155 (197)
+.. ...+++++++++ ++++++++|+.++|+........ .....+..++..|...|+.+++.+++|+++||+++|
T Consensus 69 ~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~ 147 (183)
T PF13460_consen 69 GPPPKDVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSD-EDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIY 147 (183)
T ss_dssp HSTTTHHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEG-GTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEE
T ss_pred hhhcccccccccccccccccccccceeeeccccCCCCCccccc-ccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeE
Confidence 754 234678899987 88999999999998854432111 111112223488889999999999999999999999
Q ss_pred CCC
Q 029198 156 GPL 158 (197)
Q Consensus 156 g~~ 158 (197)
|+.
T Consensus 148 ~~~ 150 (183)
T PF13460_consen 148 GNP 150 (183)
T ss_dssp BTT
T ss_pred eCC
Confidence 985
|
... |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.2e-22 Score=150.31 Aligned_cols=172 Identities=26% Similarity=0.276 Sum_probs=115.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++++++|+++|++|++++|++........ ..+ .++.. +.+...+. ++|+|||+|
T Consensus 4 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~----~~~~~-~~~~~~~~--~~D~Vvh~a 65 (292)
T TIGR01777 4 TGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----------EGY----KPWAP-LAESEALE--GADAVINLA 65 (292)
T ss_pred EcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----------eee----ecccc-cchhhhcC--CCCEEEECC
Confidence 7999999999999999999999999998766321110 011 12222 33445555 899999999
Q ss_pred CCCc------------------cchHHHHHhCC--CC--CcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHH
Q 029198 81 GREA------------------DEVEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES 137 (197)
Q Consensus 81 ~~~~------------------~~~~~ll~~~~--~~--~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~ 137 (197)
+... .++++++++++ ++ ..+++.||..+||.....+++|+.+..+.+++ ..+...|.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~ 145 (292)
T TIGR01777 66 GEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEE 145 (292)
T ss_pred CCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHH
Confidence 8532 23678888887 44 35666777788997666677888755555444 44444554
Q ss_pred HH---hhcCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 138 VL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 138 ~~---~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+ ++.+++++++||+++|||.. .....+.......... .+++++++++|+|++
T Consensus 146 ~~~~~~~~~~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~-~~g~~~~~~~~i~v~ 201 (292)
T TIGR01777 146 AAQAAEDLGTRVVLLRTGIVLGPKG--GALAKMLPPFRLGLGG-PLGSGRQWFSWIHIE 201 (292)
T ss_pred HhhhchhcCCceEEEeeeeEECCCc--chhHHHHHHHhcCccc-ccCCCCcccccEeHH
Confidence 43 44689999999999999953 2334433333222211 247788999998864
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-22 Score=156.42 Aligned_cols=169 Identities=24% Similarity=0.292 Sum_probs=126.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc--CccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~--~~d~vi~ 78 (197)
|||||++|++++++|+++|++|++++|+......... ........++++++.+|+.|++++.++++.. ++|+|||
T Consensus 66 tGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~---~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~ 142 (390)
T PLN02657 66 VGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNG---KEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVDVVVS 142 (390)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccch---hhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCcEEEE
Confidence 7999999999999999999999999998654221100 0001111357899999999999999999853 5999999
Q ss_pred ccCCCc-----------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhh--c
Q 029198 79 INGREA-----------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES--K 142 (197)
Q Consensus 79 ~a~~~~-----------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~--~ 142 (197)
|++... .++.+++++++ ++++||++||..+++ |...| .+|..+|+.++. .
T Consensus 143 ~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------------p~~~~~~sK~~~E~~l~~~~~ 208 (390)
T PLN02657 143 CLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------------PLLEFQRAKLKFEAELQALDS 208 (390)
T ss_pred CCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------------cchHHHHHHHHHHHHHHhccC
Confidence 986421 23678899887 789999999987752 22234 789999998875 8
Q ss_pred CCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeE-EEEEE
Q 029198 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVT-QLGHV 192 (197)
Q Consensus 143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~i~v 192 (197)
+++++++||+++|++. ..++..+.+++++.++|+|+..+ +++|+
T Consensus 209 gl~~tIlRp~~~~~~~------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v 253 (390)
T PLN02657 209 DFTYSIVRPTAFFKSL------GGQVEIVKDGGPYVMFGDGKLCACKPISE 253 (390)
T ss_pred CCCEEEEccHHHhccc------HHHHHhhccCCceEEecCCcccccCceeH
Confidence 9999999999999752 22456667888888888887654 45554
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-21 Score=163.63 Aligned_cols=182 Identities=20% Similarity=0.228 Sum_probs=125.0
Q ss_pred CCcccchHHHHHHHHH--HCCCeEEEEecCCCCccCCCCCCCchhhhh--ccCceEEEeecCCCH------HHHHhhhhc
Q 029198 1 MGGTRFIGVFLSRLLV--KEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDY------DFVKSSLSA 70 (197)
Q Consensus 1 tGatG~vG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~------~~l~~~~~~ 70 (197)
||||||+|++++++|+ +.|++|++++|+..... +. .+.. ...+++++.+|+.|+ +.+.++ +
T Consensus 6 TGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~--~~-----~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~- 76 (657)
T PRK07201 6 TGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSR--LE-----ALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G- 76 (657)
T ss_pred eCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHH--HH-----HHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c-
Confidence 7999999999999999 57999999999643211 00 0000 014689999999984 455555 5
Q ss_pred cCccEEEeccCCC-------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCC---CCCCCcc-hh
Q 029198 71 KGFDVVYDINGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT---VDPKSRH-KG 131 (197)
Q Consensus 71 ~~~d~vi~~a~~~-------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~---~~~~~~~-~~ 131 (197)
++|+|||+|+.. ..++.+++++++ ++++||++||..+||.... ..+|++. ..+.+.| .+
T Consensus 77 -~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~~~Y~~s 154 (657)
T PRK07201 77 -DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGLPTPYHRT 154 (657)
T ss_pred -CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCCCCchHHH
Confidence 999999999852 345788899888 6899999999999985433 3444432 2233457 99
Q ss_pred hhhHHHHHh-hcCCcEEEEccceeeCCCCCCC--------hHHHHHHHHHc-CCCcccCCCCceeEEEEEEE
Q 029198 132 KLNTESVLE-SKGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKA-GRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 132 k~~~e~~~~-~~~~~~~i~r~~~i~g~~~~~~--------~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v~ 193 (197)
|+.+|++++ ..+++++++||+++||+..... ++..++..+.. ...++.++++....+++|||
T Consensus 155 K~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vd 226 (657)
T PRK07201 155 KFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVD 226 (657)
T ss_pred HHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHH
Confidence 999999987 4789999999999999853211 11112222211 12233445556677887764
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-22 Score=151.67 Aligned_cols=170 Identities=19% Similarity=0.307 Sum_probs=121.1
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhh--ccCce----EEEeecCCCHHHHHhhhhccCc
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKI----LHLKGDRKDYDFVKSSLSAKGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~d~~~~~~l~~~~~~~~~ 73 (197)
|||+|.+|+.|+++|++.+ .++++++|++.+...... ++.. ..+++ ..+.+|+.|.+.+.++++..+|
T Consensus 4 TGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~-----~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~p 78 (293)
T PF02719_consen 4 TGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELER-----ELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKP 78 (293)
T ss_dssp ETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHH-----HCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-
T ss_pred EccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHH-----HHhhcccccCcccccCceeecccCHHHHHHHHhhcCC
Confidence 7999999999999999998 689999999776432111 1110 01234 3458899999999999998999
Q ss_pred cEEEeccCCC----------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhh
Q 029198 74 DVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN 134 (197)
Q Consensus 74 d~vi~~a~~~----------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~ 134 (197)
|+|||+|+.. +.+++|+++++. ++++||++||... .+|.+.+ .+|..
T Consensus 79 diVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------------v~PtnvmGatKrl 144 (293)
T PF02719_consen 79 DIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------------VNPTNVMGATKRL 144 (293)
T ss_dssp SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------------SS--SHHHHHHHH
T ss_pred CEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------------CCCCcHHHHHHHH
Confidence 9999999984 346899999988 8999999999554 2467777 99999
Q ss_pred HHHHHhh-------cCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEE
Q 029198 135 TESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (197)
Q Consensus 135 ~e~~~~~-------~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 192 (197)
+|.++.+ .+..++++|+|+|.|. .+++++.|.+++.+|+|+++. +.+..|-|+-+
T Consensus 145 aE~l~~~~~~~~~~~~t~f~~VRFGNVlgS--~GSVip~F~~Qi~~g~PlTvT-~p~mtRffmti 206 (293)
T PF02719_consen 145 AEKLVQAANQYSGNSDTKFSSVRFGNVLGS--RGSVIPLFKKQIKNGGPLTVT-DPDMTRFFMTI 206 (293)
T ss_dssp HHHHHHHHCCTSSSS--EEEEEEE-EETTG--TTSCHHHHHHHHHTTSSEEEC-ETT-EEEEE-H
T ss_pred HHHHHHHHhhhCCCCCcEEEEEEecceecC--CCcHHHHHHHHHHcCCcceeC-CCCcEEEEecH
Confidence 9998853 2468999999999998 468999999999999999985 45666766543
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-21 Score=140.96 Aligned_cols=171 Identities=24% Similarity=0.270 Sum_probs=117.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||+||++|+..|.+.||+|++++|++.+....+.. .+ ...+.+....+. ++|+|||+|
T Consensus 4 TGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~-----------~v-------~~~~~~~~~~~~-~~DavINLA 64 (297)
T COG1090 4 TGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP-----------NV-------TLWEGLADALTL-GIDAVINLA 64 (297)
T ss_pred eccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc-----------cc-------cccchhhhcccC-CCCEEEECC
Confidence 79999999999999999999999999998885433321 11 122334444432 799999999
Q ss_pred CCCcc------------------chHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc--hhhhhHH
Q 029198 81 GREAD------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH--KGKLNTE 136 (197)
Q Consensus 81 ~~~~~------------------~~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~--~~k~~~e 136 (197)
|.++. .|+.+.+++. +++.+|.-|..+.||......++|++++...-.. ...|+-|
T Consensus 65 G~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~ 144 (297)
T COG1090 65 GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEE 144 (297)
T ss_pred CCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHH
Confidence 98643 2566666544 6778888888999999999999999543221112 2334433
Q ss_pred HH-HhhcCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 137 SV-LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 137 ~~-~~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.. .+..+.+++++|.|.|.++. ..++..++...+-+--- .+|+|+|+++|||+|
T Consensus 145 a~~a~~~gtRvvllRtGvVLs~~--GGaL~~m~~~fk~glGG-~~GsGrQ~~SWIhie 199 (297)
T COG1090 145 ALQAQQLGTRVVLLRTGVVLSPD--GGALGKMLPLFKLGLGG-KLGSGRQWFSWIHIE 199 (297)
T ss_pred HhhhhhcCceEEEEEEEEEecCC--CcchhhhcchhhhccCC-ccCCCCceeeeeeHH
Confidence 33 24568999999999999973 23444444333322211 259999999999876
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.9e-21 Score=146.62 Aligned_cols=152 Identities=18% Similarity=0.249 Sum_probs=111.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCcc--CCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||||++|++++++|+++||+|++++|+..... ..+. .+.....+++++.+|+.|.+++.+++. ++|.|+|
T Consensus 12 TGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~d~~~~~~~l~--~~d~v~~ 84 (297)
T PLN02583 12 MDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIR-----GLSCEEERLKVFDVDPLDYHSILDALK--GCSGLFC 84 (297)
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHH-----hcccCCCceEEEEecCCCHHHHHHHHc--CCCEEEE
Confidence 799999999999999999999999999643211 0000 000012368899999999999999998 8999999
Q ss_pred ccCCC--------------ccchHHHHHhCC---CCCcEEEEecceec--ccC---CCCCCCCCCCCCCC------Ccc-
Q 029198 79 INGRE--------------ADEVEPILDALP---NLEQFIYCSSAGVY--LKS---DLLPHCETDTVDPK------SRH- 129 (197)
Q Consensus 79 ~a~~~--------------~~~~~~ll~~~~---~~~~~v~~Ss~~vy--g~~---~~~~~~e~~~~~~~------~~~- 129 (197)
+++.. ..++.++++++. ++++||++||...+ +.. ...+++|+.+..+. .+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~ 164 (297)
T PLN02583 85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA 164 (297)
T ss_pred eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence 76432 134778888876 46899999997654 311 22355665432221 257
Q ss_pred hhhhhHHHHH----hhcCCcEEEEccceeeCCCC
Q 029198 130 KGKLNTESVL----ESKGVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 130 ~~k~~~e~~~----~~~~~~~~i~r~~~i~g~~~ 159 (197)
.+|..+|+++ +..+++++++||+++|||+.
T Consensus 165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~ 198 (297)
T PLN02583 165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSL 198 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCC
Confidence 8999999976 34689999999999999964
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-20 Score=157.69 Aligned_cols=147 Identities=25% Similarity=0.371 Sum_probs=115.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++++++|+++|++|++++|+.... . ..++.++.+|+.|.+++.++++ ++|+|||+|
T Consensus 6 TGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~-----------~~~v~~v~gDL~D~~~l~~al~--~vD~VVHlA 69 (854)
T PRK05865 6 TGASGVLGRGLTARLLSQGHEVVGIARHRPDS---W-----------PSSADFIAADIRDATAVESAMT--GADVVAHCA 69 (854)
T ss_pred ECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---c-----------ccCceEEEeeCCCHHHHHHHHh--CCCEEEECC
Confidence 79999999999999999999999999975331 1 1357889999999999999998 899999999
Q ss_pred CCC-------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcchhhhhHHHHHhhcCCcEEEEcc
Q 029198 81 GRE-------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP 151 (197)
Q Consensus 81 ~~~-------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~i~r~ 151 (197)
+.. ..++.+++++++ ++++||++||.. |..+|+++++++++++++||
T Consensus 70 a~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------------------K~aaE~ll~~~gl~~vILRp 125 (854)
T PRK05865 70 WVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGH------------------------QPRVEQMLADCGLEWVAVRC 125 (854)
T ss_pred CcccchHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------------------HHHHHHHHHHcCCCEEEEEe
Confidence 863 235788999988 778999999842 78899999889999999999
Q ss_pred ceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+++|||+. ..++..+.. .++...+++.+.++|+||+
T Consensus 126 ~~VYGP~~-----~~~i~~ll~-~~v~~~G~~~~~~dfIhVd 161 (854)
T PRK05865 126 ALIFGRNV-----DNWVQRLFA-LPVLPAGYADRVVQVVHSD 161 (854)
T ss_pred ceEeCCCh-----HHHHHHHhc-CceeccCCCCceEeeeeHH
Confidence 99999952 223333322 2222334556677887764
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-20 Score=146.18 Aligned_cols=156 Identities=19% Similarity=0.245 Sum_probs=108.6
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccC--CCCCCCch-hh--hhcc-CceEEEeecCCCH------HHHHh
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQ--QLPGESDQ-EF--AEFS-SKILHLKGDRKDY------DFVKS 66 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~--~~~~~~~~-~~--~~~~-~~~~~~~~d~~~~------~~l~~ 66 (197)
||||||+|++++++|+++| ++|+++.|+.+.... .+...... .+ .... .+++++.+|+.++ +.+..
T Consensus 5 tGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~~~~ 84 (367)
T TIGR01746 5 TGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAEWER 84 (367)
T ss_pred eccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHHHHH
Confidence 7999999999999999998 689999998653110 00000000 00 0001 4789999998754 45556
Q ss_pred hhhccCccEEEeccCCC-------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCC-----CCC
Q 029198 67 SLSAKGFDVVYDINGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-----DPK 126 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~-------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~-----~~~ 126 (197)
+.+ ++|+|||+|+.. ..++.++++++. +.++|+++||..+|+.....+..|+++. .+.
T Consensus 85 ~~~--~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~ 162 (367)
T TIGR01746 85 LAE--NVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLA 162 (367)
T ss_pred HHh--hCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccccC
Confidence 665 899999999852 234677888877 6778999999999976433223333322 123
Q ss_pred Ccc-hhhhhHHHHHhh---cCCcEEEEccceeeCCC
Q 029198 127 SRH-KGKLNTESVLES---KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~~---~~~~~~i~r~~~i~g~~ 158 (197)
+.| .+|+.+|.+++. .+++++++|||.+||+.
T Consensus 163 ~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~ 198 (367)
T TIGR01746 163 GGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNS 198 (367)
T ss_pred CChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecC
Confidence 457 999999998754 48999999999999973
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=7e-20 Score=145.41 Aligned_cols=170 Identities=21% Similarity=0.303 Sum_probs=139.3
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
|||+|-+|+.+++++++.+ .+++.++|++.+..... .++.+. ...+.++.+|+.|.+.+..+++..++|+||
T Consensus 256 TGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~-----~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~Vf 330 (588)
T COG1086 256 TGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLID-----MELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVF 330 (588)
T ss_pred eCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHH-----HHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEE
Confidence 7999999999999999998 58999999887743221 112221 357889999999999999999977899999
Q ss_pred eccCCC----------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHH
Q 029198 78 DINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV 138 (197)
Q Consensus 78 ~~a~~~----------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~ 138 (197)
|+|+.. +-+++|+++++. ++++||.+||... .+|.+.+ .+|..+|.+
T Consensus 331 HAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA--------------V~PtNvmGaTKr~aE~~ 396 (588)
T COG1086 331 HAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA--------------VNPTNVMGATKRLAEKL 396 (588)
T ss_pred EhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc--------------cCCchHhhHHHHHHHHH
Confidence 999974 346999999998 9999999998553 3467776 999999998
Q ss_pred Hhhc-------CCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEE
Q 029198 139 LESK-------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (197)
Q Consensus 139 ~~~~-------~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 192 (197)
+.+. +-.++++|+|||.|. +++.++-+-+++.+|.|+++. +.+..|-|+-+
T Consensus 397 ~~a~~~~~~~~~T~f~~VRFGNVlGS--rGSViPlFk~QI~~GgplTvT-dp~mtRyfMTI 454 (588)
T COG1086 397 FQAANRNVSGTGTRFCVVRFGNVLGS--RGSVIPLFKKQIAEGGPLTVT-DPDMTRFFMTI 454 (588)
T ss_pred HHHHhhccCCCCcEEEEEEecceecC--CCCCHHHHHHHHHcCCCcccc-CCCceeEEEEH
Confidence 7432 378999999999998 568899999999999999985 56777777644
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.6e-20 Score=139.48 Aligned_cols=171 Identities=16% Similarity=0.169 Sum_probs=118.9
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCcc--CCCCCCC--chhhh-hccCceEEEeecCCC------HHHHHhhh
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIA--QQLPGES--DQEFA-EFSSKILHLKGDRKD------YDFVKSSL 68 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~--~~~~~~~--~~~~~-~~~~~~~~~~~d~~~------~~~l~~~~ 68 (197)
||||||+|.+++.+|+.+-. +|++++|.++.-. ..+.... ...+. ....+++.+.+|+.. ....+.+.
T Consensus 6 TGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La 85 (382)
T COG3320 6 TGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELA 85 (382)
T ss_pred ecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHHHHHh
Confidence 89999999999999998865 9999999877321 1111111 11111 223689999999994 35666677
Q ss_pred hccCccEEEeccCC-------------CccchHHHHHhCC--CCCcEEEEecceecccCCCCCCC--CC--CC-----CC
Q 029198 69 SAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC--ET--DT-----VD 124 (197)
Q Consensus 69 ~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~--e~--~~-----~~ 124 (197)
+ .+|.|||+++. ++.++..+++.+. +.|.+.|+||++++........+ ++ ++ ..
T Consensus 86 ~--~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (382)
T COG3320 86 E--NVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQG 163 (382)
T ss_pred h--hcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccccCc
Confidence 6 89999999876 3557889999888 67889999999997643221111 11 11 12
Q ss_pred CCCcc-hhhhhHHHHHhh---cCCcEEEEccceeeCCCC-----CCChHHHHHHHHHc
Q 029198 125 PKSRH-KGKLNTESVLES---KGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLKA 173 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~~---~~~~~~i~r~~~i~g~~~-----~~~~~~~~~~~~~~ 173 (197)
+.+.| +|||.+|..+++ .|++++|+|||.|.|... ...+...++....+
T Consensus 164 ~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~ 221 (382)
T COG3320 164 LAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQ 221 (382)
T ss_pred cCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHH
Confidence 23457 999999999853 589999999999999753 23345555554443
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.2e-20 Score=136.68 Aligned_cols=147 Identities=19% Similarity=0.164 Sum_probs=108.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhh-hccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSL-SAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~-~~~~~d~vi~ 78 (197)
|||||++|++++++|++.||+|+++.|+++.....+.. ..+++++.+|+.| .+.+.+.+ . ++|+||+
T Consensus 23 tGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~---------~~~~~~~~~Dl~d~~~~l~~~~~~--~~d~vi~ 91 (251)
T PLN00141 23 AGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ---------DPSLQIVRADVTEGSDKLVEAIGD--DSDAVIC 91 (251)
T ss_pred ECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc---------CCceEEEEeeCCCCHHHHHHHhhc--CCCEEEE
Confidence 69999999999999999999999999987653221110 2368899999998 46676666 4 8999999
Q ss_pred ccCCCc------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCC-CCCCcc-hhhhhHHHHHhhc
Q 029198 79 INGREA------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-DPKSRH-KGKLNTESVLESK 142 (197)
Q Consensus 79 ~a~~~~------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~-~~~~~~-~~k~~~e~~~~~~ 142 (197)
+++... .++.+++++++ +.++||++||.++|+.....+..+.... ++...+ ..|..+|+++++.
T Consensus 92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~ 171 (251)
T PLN00141 92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKS 171 (251)
T ss_pred CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhc
Confidence 987532 13678888887 7889999999999985433222111100 111122 5688889999999
Q ss_pred CCcEEEEccceeeCCC
Q 029198 143 GVNWTSLRPVYIYGPL 158 (197)
Q Consensus 143 ~~~~~i~r~~~i~g~~ 158 (197)
+++++++||++++++.
T Consensus 172 gi~~~iirpg~~~~~~ 187 (251)
T PLN00141 172 GINYTIVRPGGLTNDP 187 (251)
T ss_pred CCcEEEEECCCccCCC
Confidence 9999999999999863
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-19 Score=130.78 Aligned_cols=191 Identities=20% Similarity=0.153 Sum_probs=145.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||-||+-|++|++.|++.||+|+++.|.......... .....-.....++.++.+|+.|...+.++++..+||.|+|+|
T Consensus 8 TGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdEIYNLa 86 (345)
T COG1089 8 TGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDEIYNLA 86 (345)
T ss_pred ecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHHhcCchhheecc
Confidence 7999999999999999999999999998665433211 111111223456899999999999999999999999999999
Q ss_pred CCCcc----------------chHHHHHhCC--C--CCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHH--
Q 029198 81 GREAD----------------EVEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES-- 137 (197)
Q Consensus 81 ~~~~~----------------~~~~ll~~~~--~--~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~-- 137 (197)
+++.. ++.++|++++ + ..+|...||...||.....|..|..|..|.++| .+|..+--
T Consensus 87 AQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~t 166 (345)
T COG1089 87 AQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWIT 166 (345)
T ss_pred ccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHhee
Confidence 98532 4789999999 3 468999999999999888899999999999999 78877654
Q ss_pred --HHhhcCCcEEEEccceeeCCCCCCChH----HHHHHHHHcCC-CcccCCCCceeEEEEEE
Q 029198 138 --VLESKGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGR-PIPIPGSGIQVTQLGHV 192 (197)
Q Consensus 138 --~~~~~~~~~~i~r~~~i~g~~~~~~~~----~~~~~~~~~~~-~~~~~~~g~~~~~~i~v 192 (197)
+-+++|+-.+.=...+--+|.....++ ..-+..++.|. .....|+-+.+|||-|.
T Consensus 167 vNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A 228 (345)
T COG1089 167 VNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHA 228 (345)
T ss_pred eehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccch
Confidence 446788877776666666665333333 33344455553 33345888889999875
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.5e-19 Score=144.88 Aligned_cols=188 Identities=17% Similarity=0.138 Sum_probs=124.6
Q ss_pred CCcccchHHHHHHHHHHCCC---eEEEEecCCCCcc--CCC-----CCCCchhhhh---------ccCceEEEeecCCCH
Q 029198 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIA--QQL-----PGESDQEFAE---------FSSKILHLKGDRKDY 61 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~---~V~~~~r~~~~~~--~~~-----~~~~~~~~~~---------~~~~~~~~~~d~~~~ 61 (197)
||||||+|++|+++|++.+. +|+++.|...... +.+ .......+.+ ...++.++.+|+.++
T Consensus 125 TGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~ 204 (605)
T PLN02503 125 TGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCES 204 (605)
T ss_pred cCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCCc
Confidence 89999999999999998753 7899999755321 111 0000001111 124689999999986
Q ss_pred ------HHHHhhhhccCccEEEeccCCC-------------ccchHHHHHhCC---CCCcEEEEecceecccCCCCCCCC
Q 029198 62 ------DFVKSSLSAKGFDVVYDINGRE-------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCE 119 (197)
Q Consensus 62 ------~~l~~~~~~~~~d~vi~~a~~~-------------~~~~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e 119 (197)
+..+.+.+ ++|+|||+|+.. +.++.+++++++ +.++||++||..+||.... .+.|
T Consensus 205 ~LGLs~~~~~~L~~--~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G-~i~E 281 (605)
T PLN02503 205 NLGLEPDLADEIAK--EVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQG-RIME 281 (605)
T ss_pred ccCCCHHHHHHHHh--cCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCC-eeee
Confidence 34555555 799999999863 235788899886 4678999999999986531 1112
Q ss_pred CCCC----------------------------------------------------------CC-CCcc-hhhhhHHHHH
Q 029198 120 TDTV----------------------------------------------------------DP-KSRH-KGKLNTESVL 139 (197)
Q Consensus 120 ~~~~----------------------------------------------------------~~-~~~~-~~k~~~e~~~ 139 (197)
...+ .+ .+.| .+|..+|.++
T Consensus 282 ~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV 361 (605)
T PLN02503 282 KPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVI 361 (605)
T ss_pred eecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHH
Confidence 1110 00 1346 8999999998
Q ss_pred hh--cCCcEEEEccceeeC----------CCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 140 ES--KGVNWTSLRPVYIYG----------PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 140 ~~--~~~~~~i~r~~~i~g----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+ .++|++|+||+.|.+ ++. .....++-.+..|..-.++++++...|+++||
T Consensus 362 ~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~--~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD 425 (605)
T PLN02503 362 NSMRGDIPVVIIRPSVIESTWKDPFPGWMEGN--RMMDPIVLYYGKGQLTGFLADPNGVLDVVPAD 425 (605)
T ss_pred HHhcCCCCEEEEcCCEecccccCCccccccCc--cccchhhhheeccceeEEEeCCCeeEeEEeec
Confidence 65 479999999999943 321 11111122223555444668889999999998
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-19 Score=137.23 Aligned_cols=158 Identities=18% Similarity=0.226 Sum_probs=111.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc----cC-ccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KG-FDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~----~~-~d~ 75 (197)
|||||++|++++++|+++|++|.+++|++++.. ..+++.+.+|+.|++++..+++. .+ +|.
T Consensus 5 tGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--------------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~ 70 (285)
T TIGR03649 5 TGGTGKTASRIARLLQAASVPFLVASRSSSSSA--------------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISA 70 (285)
T ss_pred EcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--------------CCCCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence 799999999999999999999999999976521 13566778999999999998831 26 999
Q ss_pred EEeccCCCc---cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcchhhhhHHHHHhhc-CCcEEEE
Q 029198 76 VYDINGREA---DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESK-GVNWTSL 149 (197)
Q Consensus 76 vi~~a~~~~---~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~-~~~~~i~ 149 (197)
|+++++... ....+++++++ +++|||++||..++... ..+...+.++++. +++++++
T Consensus 71 v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-----------------~~~~~~~~~l~~~~gi~~til 133 (285)
T TIGR03649 71 VYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKGG-----------------PAMGQVHAHLDSLGGVEYTVL 133 (285)
T ss_pred EEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeeccccCCCC-----------------chHHHHHHHHHhccCCCEEEE
Confidence 999987532 34678899887 89999999986553110 1134567777775 9999999
Q ss_pred ccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEEeee
Q 029198 150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKVRK 196 (197)
Q Consensus 150 r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~~~d 196 (197)
||++++++.. .. .....+.+...+. .+.++...+|+ +++|
T Consensus 134 Rp~~f~~~~~-~~---~~~~~~~~~~~~~-~~~g~~~~~~v--~~~D 173 (285)
T TIGR03649 134 RPTWFMENFS-EE---FHVEAIRKENKIY-SATGDGKIPFV--SADD 173 (285)
T ss_pred eccHHhhhhc-cc---ccccccccCCeEE-ecCCCCccCcc--cHHH
Confidence 9999986531 11 1122233333332 34566667764 4444
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-18 Score=131.33 Aligned_cols=154 Identities=17% Similarity=0.143 Sum_probs=109.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+||+|++|+++|+++|++|+... .|+.|.+.+...++..++|+|||+|
T Consensus 15 tG~tGfiG~~l~~~L~~~g~~V~~~~-----------------------------~~~~~~~~v~~~l~~~~~D~ViH~A 65 (298)
T PLN02778 15 YGKTGWIGGLLGKLCQEQGIDFHYGS-----------------------------GRLENRASLEADIDAVKPTHVFNAA 65 (298)
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEec-----------------------------CccCCHHHHHHHHHhcCCCEEEECC
Confidence 79999999999999999999987432 1234556677777666899999999
Q ss_pred CCCc-------------------cchHHHHHhCC--CCCcEEEEecceecccCC------CCCCCCCCCCCC-CCcc-hh
Q 029198 81 GREA-------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD------LLPHCETDTVDP-KSRH-KG 131 (197)
Q Consensus 81 ~~~~-------------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~------~~~~~e~~~~~~-~~~~-~~ 131 (197)
+... .++.+++++++ ++ +++++||..+|+... ..+++|++++.+ .+.| .+
T Consensus 66 a~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~s 144 (298)
T PLN02778 66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKT 144 (298)
T ss_pred cccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHH
Confidence 8641 13677899988 66 466777778886422 224677766654 4678 99
Q ss_pred hhhHHHHHhhcCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEE
Q 029198 132 KLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (197)
Q Consensus 132 k~~~e~~~~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 192 (197)
|..+|.++..+. +..++|+...+|++. .....++..+..++++...+ .+|+|+
T Consensus 145 K~~~E~~~~~y~-~~~~lr~~~~~~~~~--~~~~~fi~~~~~~~~~~~~~-----~s~~yv 197 (298)
T PLN02778 145 KAMVEELLKNYE-NVCTLRVRMPISSDL--SNPRNFITKITRYEKVVNIP-----NSMTIL 197 (298)
T ss_pred HHHHHHHHHHhh-ccEEeeecccCCccc--ccHHHHHHHHHcCCCeeEcC-----CCCEEH
Confidence 999999998753 678899988888642 12344677787877654433 246665
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-18 Score=142.85 Aligned_cols=139 Identities=12% Similarity=0.113 Sum_probs=103.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++++++|+++||+|++++|.+.... ..+++++.+|+.++. +.+++. ++|+|||++
T Consensus 6 TGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~--------------~~~ve~v~~Dl~d~~-l~~al~--~~D~VIHLA 68 (699)
T PRK12320 6 TDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL--------------DPRVDYVCASLRNPV-LQELAG--EADAVIHLA 68 (699)
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc--------------cCCceEEEccCCCHH-HHHHhc--CCCEEEEcC
Confidence 799999999999999999999999998654310 246889999999985 777777 899999999
Q ss_pred CCC--------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcchhhhhHHHHHhhcCCcEEEEc
Q 029198 81 GRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR 150 (197)
Q Consensus 81 ~~~--------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~i~r 150 (197)
+.. ..++.+++++++ ++ ++|++||. +|... .| ..+|.++..++++++++|
T Consensus 69 a~~~~~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~~--------------~~---~~aE~ll~~~~~p~~ILR 128 (699)
T PRK12320 69 PVDTSAPGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRPE--------------LY---RQAETLVSTGWAPSLVIR 128 (699)
T ss_pred ccCccchhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCCc--------------cc---cHHHHHHHhcCCCEEEEe
Confidence 853 234778999988 55 79999975 33211 01 247778877889999999
Q ss_pred cceeeCCCCCC---ChHHHHHHHHHcCCC
Q 029198 151 PVYIYGPLNYN---PVEEWFFHRLKAGRP 176 (197)
Q Consensus 151 ~~~i~g~~~~~---~~~~~~~~~~~~~~~ 176 (197)
++++||++... +++..++....++++
T Consensus 129 ~~nVYGp~~~~~~~r~I~~~l~~~~~~~p 157 (699)
T PRK12320 129 IAPPVGRQLDWMVCRTVATLLRSKVSARP 157 (699)
T ss_pred CceecCCCCcccHhHHHHHHHHHHHcCCc
Confidence 99999996432 234444444434443
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.2e-18 Score=124.69 Aligned_cols=169 Identities=26% Similarity=0.334 Sum_probs=136.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+|||||+|..++.+|.+.|.+|++--|.++.....+.- ..-..++-++..|+.|+++++++.+ ..++|||+.
T Consensus 67 FGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkv------mGdLGQvl~~~fd~~DedSIr~vvk--~sNVVINLI 138 (391)
T KOG2865|consen 67 FGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKV------MGDLGQVLFMKFDLRDEDSIRAVVK--HSNVVINLI 138 (391)
T ss_pred ecccccccHHHHHHHhhcCCeEEEeccCCccchhheee------cccccceeeeccCCCCHHHHHHHHH--hCcEEEEee
Confidence 59999999999999999999999999987664333221 1113678999999999999999999 899999999
Q ss_pred CCC------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhcCCc
Q 029198 81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVN 145 (197)
Q Consensus 81 ~~~------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~ 145 (197)
|.. +...+.+...|+ ++.|||++|+.+.- ....+.+ .+|...|..+++.--+
T Consensus 139 Grd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan-------------v~s~Sr~LrsK~~gE~aVrdafPe 205 (391)
T KOG2865|consen 139 GRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN-------------VKSPSRMLRSKAAGEEAVRDAFPE 205 (391)
T ss_pred ccccccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc-------------ccChHHHHHhhhhhHHHHHhhCCc
Confidence 863 345778888888 99999999987631 1122334 8999999999998889
Q ss_pred EEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCce-eEEEEEE
Q 029198 146 WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHV 192 (197)
Q Consensus 146 ~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~i~v 192 (197)
.+|+||..+||. .+++++++....++-..+++++.|+. ...++||
T Consensus 206 AtIirPa~iyG~--eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV 251 (391)
T KOG2865|consen 206 ATIIRPADIYGT--EDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYV 251 (391)
T ss_pred ceeechhhhccc--chhHHHHHHHHHHhcCceeeecCCcceeeccEEE
Confidence 999999999998 46888888888887888888887744 3456665
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-18 Score=139.54 Aligned_cols=151 Identities=20% Similarity=0.182 Sum_probs=108.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhh--h--hccCceEEEeecCCCHHHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF--A--EFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~v 76 (197)
|||+|++|.+++++|++.|++|++++|+.+.............+ . ....++.++.+|+.|.+++.+++. ++|+|
T Consensus 86 TGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg--giDiV 163 (576)
T PLN03209 86 AGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG--NASVV 163 (576)
T ss_pred ECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc--CCCEE
Confidence 69999999999999999999999999987653221100000000 0 001358899999999999999998 89999
Q ss_pred EeccCCCc--------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHH
Q 029198 77 YDINGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL 139 (197)
Q Consensus 77 i~~a~~~~--------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~ 139 (197)
||++|... .++.+++++++ ++++||++||.+.+... .... .......| ..|..+|..+
T Consensus 164 Vn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g----~p~~-~~~sk~~~~~~KraaE~~L 238 (576)
T PLN03209 164 ICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG----FPAA-ILNLFWGVLCWKRKAEEAL 238 (576)
T ss_pred EEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC----cccc-chhhHHHHHHHHHHHHHHH
Confidence 99998642 24678888887 78999999998763111 0000 11111223 6788899999
Q ss_pred hhcCCcEEEEccceeeCCC
Q 029198 140 ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 140 ~~~~~~~~i~r~~~i~g~~ 158 (197)
...|++|+++|||+++++.
T Consensus 239 ~~sGIrvTIVRPG~L~tp~ 257 (576)
T PLN03209 239 IASGLPYTIVRPGGMERPT 257 (576)
T ss_pred HHcCCCEEEEECCeecCCc
Confidence 9999999999999998763
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-18 Score=128.90 Aligned_cols=174 Identities=21% Similarity=0.335 Sum_probs=117.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+||||.+|+++++.|++.+++|.++.|+..+... ..+. ..+++++.+|+.|++++.++++ ++|.||.+.
T Consensus 4 ~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~-------~~l~--~~g~~vv~~d~~~~~~l~~al~--g~d~v~~~~ 72 (233)
T PF05368_consen 4 TGATGNQGRSVVRALLSAGFSVRALVRDPSSDRA-------QQLQ--ALGAEVVEADYDDPESLVAALK--GVDAVFSVT 72 (233)
T ss_dssp ETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHH-------HHHH--HTTTEEEES-TT-HHHHHHHHT--TCSEEEEES
T ss_pred ECCccHHHHHHHHHHHhCCCCcEEEEeccchhhh-------hhhh--cccceEeecccCCHHHHHHHHc--CCceEEeec
Confidence 6999999999999999999999999998743110 0011 2467899999999999999999 999999888
Q ss_pred CCC----ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc-chhhhhHHHHHhhcCCcEEEEccce
Q 029198 81 GRE----ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRPVY 153 (197)
Q Consensus 81 ~~~----~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~-~~~k~~~e~~~~~~~~~~~i~r~~~ 153 (197)
+.. .....+++++++ ++++||+.|....+. +.....|... +..|...|+++++.+++++++|+|+
T Consensus 73 ~~~~~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~--------~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~ 144 (233)
T PF05368_consen 73 PPSHPSELEQQKNLIDAAKAAGVKHFVPSSFGADYD--------ESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPGF 144 (233)
T ss_dssp SCSCCCHHHHHHHHHHHHHHHT-SEEEESEESSGTT--------TTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-E
T ss_pred CcchhhhhhhhhhHHHhhhccccceEEEEEeccccc--------ccccccccchhhhhhhhhhhhhhhccccceeccccc
Confidence 754 234678999998 999999755443431 1111222223 4789999999999999999999998
Q ss_pred eeCCCCCCChHHHHHHHHHcC-CCcccCCCCceeEEEEEEEeeeC
Q 029198 154 IYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKVRKL 197 (197)
Q Consensus 154 i~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~i~v~~~d~ 197 (197)
++.... ..+.. ....... ..+.++++++....+. ++.+||
T Consensus 145 f~e~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv 185 (233)
T PF05368_consen 145 FMENLL-PPFAP--VVDIKKSKDVVTLPGPGNQKAVPV-TDTRDV 185 (233)
T ss_dssp EHHHHH-TTTHH--TTCSCCTSSEEEEETTSTSEEEEE-EHHHHH
T ss_pred hhhhhh-hhhcc--cccccccceEEEEccCCCcccccc-ccHHHH
Confidence 765421 00000 0011122 1356667777666665 676664
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.2e-17 Score=145.24 Aligned_cols=188 Identities=18% Similarity=0.163 Sum_probs=122.3
Q ss_pred CCcccchHHHHHHHHHHCC----CeEEEEecCCCCccC--CCCCCC---chhhhhccCceEEEeecCCC------HHHHH
Q 029198 1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQ--QLPGES---DQEFAEFSSKILHLKGDRKD------YDFVK 65 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g----~~V~~~~r~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~d~~~------~~~l~ 65 (197)
||||||+|++++++|++++ ++|+.+.|....... .+.... .........+++++.+|+.+ .+.+.
T Consensus 977 TGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~ 1056 (1389)
T TIGR03443 977 TGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWS 1056 (1389)
T ss_pred eCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHHHH
Confidence 7999999999999999987 799999997543211 000000 00000112368999999974 45556
Q ss_pred hhhhccCccEEEeccCCC-------------ccchHHHHHhCC--CCCcEEEEecceecccCC------------CCCCC
Q 029198 66 SSLSAKGFDVVYDINGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD------------LLPHC 118 (197)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~-------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~------------~~~~~ 118 (197)
.+.. ++|+|||+|+.. +.++.+++++++ +.++|+++||.++|+... ...+.
T Consensus 1057 ~l~~--~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~ 1134 (1389)
T TIGR03443 1057 DLTN--EVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIP 1134 (1389)
T ss_pred HHHh--cCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccCCCCC
Confidence 6665 899999998863 335778888887 678999999999986321 11223
Q ss_pred CCCCC-----CCCCcc-hhhhhHHHHHhh---cCCcEEEEccceeeCCCCCC-----ChHHHHHHHHHcCCCcccCCCCc
Q 029198 119 ETDTV-----DPKSRH-KGKLNTESVLES---KGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGI 184 (197)
Q Consensus 119 e~~~~-----~~~~~~-~~k~~~e~~~~~---~~~~~~i~r~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~ 184 (197)
|+... .+.+.| .+|+.+|.++.+ .+++++++||+.+||+...+ .++..++..... +..++++.
T Consensus 1135 e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~---~~~~p~~~ 1211 (1389)
T TIGR03443 1135 ESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQ---LGLIPNIN 1211 (1389)
T ss_pred cccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHH---hCCcCCCC
Confidence 33221 123447 999999998743 58999999999999986322 223333332222 22334455
Q ss_pred eeEEEEEEE
Q 029198 185 QVTQLGHVK 193 (197)
Q Consensus 185 ~~~~~i~v~ 193 (197)
..++|+|||
T Consensus 1212 ~~~~~~~Vd 1220 (1389)
T TIGR03443 1212 NTVNMVPVD 1220 (1389)
T ss_pred CccccccHH
Confidence 567887765
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.9e-17 Score=115.97 Aligned_cols=168 Identities=18% Similarity=0.298 Sum_probs=127.5
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
||++|.+|++|.+.+.+.|. +=+.+.-+ -.+|+++.++.+++|+...|..|||
T Consensus 7 tGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-------------------------kd~DLt~~a~t~~lF~~ekPthVIh 61 (315)
T KOG1431|consen 7 TGGTGLVGSAIVKVVQEQGFDDENWVFIGS-------------------------KDADLTNLADTRALFESEKPTHVIH 61 (315)
T ss_pred ecCCchHHHHHHHHHHhcCCCCcceEEecc-------------------------ccccccchHHHHHHHhccCCceeee
Confidence 69999999999999998875 22222221 1258899999999999999999999
Q ss_pred ccCCC-----------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCC----CCCCCCc-c-hhhh
Q 029198 79 INGRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKSR-H-KGKL 133 (197)
Q Consensus 79 ~a~~~-----------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~----~~~~~~~-~-~~k~ 133 (197)
+|+.- ..-..|++..+. ++++++++.|..+|.+...-|++|.. ++.|++. | .+|.
T Consensus 62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr 141 (315)
T KOG1431|consen 62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKR 141 (315)
T ss_pred hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHH
Confidence 98752 122467888777 99999999999999887777888755 4566665 5 6675
Q ss_pred hHH----HHHhhcCCcEEEEccceeeCCCC-----CCChHHHHHHHH----HcCC-CcccCCCCceeEEEEEEE
Q 029198 134 NTE----SVLESKGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRL----KAGR-PIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 134 ~~e----~~~~~~~~~~~i~r~~~i~g~~~-----~~~~~~~~~~~~----~~~~-~~~~~~~g~~~~~~i~v~ 193 (197)
.+. .+..++|..++.+-|.++|||.+ .+..++.+++++ .+|. .+.+||+|..+|.|+|++
T Consensus 142 ~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~ 215 (315)
T KOG1431|consen 142 MIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSD 215 (315)
T ss_pred HHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHh
Confidence 543 34567899999999999999973 233456665543 3343 789999999999999975
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.9e-16 Score=116.25 Aligned_cols=134 Identities=20% Similarity=0.177 Sum_probs=100.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++.... ..+++++.+|+.|++++.++++.. .+|+
T Consensus 10 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~ 76 (270)
T PRK06179 10 TGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV 76 (270)
T ss_pred ecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence 7999999999999999999999999998655221 136789999999999999888742 5899
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||++|.... + ++.+++.++ +.++||++||...+.... ....|
T Consensus 77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~Y 145 (270)
T PRK06179 77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAP-----------YMALY 145 (270)
T ss_pred EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCC-----------CccHH
Confidence 9999987421 1 223344444 678999999966543211 12345
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++++++++||++.++.
T Consensus 146 ~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~ 182 (270)
T PRK06179 146 AASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNF 182 (270)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccc
Confidence 88988887643 469999999999998764
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.8e-15 Score=112.40 Aligned_cols=139 Identities=13% Similarity=0.078 Sum_probs=96.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++++.... .......+.++.+|+.+.+++.++++.. ++|+
T Consensus 16 tG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 16 TGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKV--------AKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred eCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH--------HHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 79999999999999999999999999875432211 0111246789999999999887765432 5899
Q ss_pred EEeccCCCcc----------------------chHHHHHhC----C-CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD----------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~----------------------~~~~ll~~~----~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+|+.... ++.++++++ + ...++|++||...+.... ....
T Consensus 88 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~-----------~~~~ 156 (255)
T PRK05717 88 LVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP-----------DTEA 156 (255)
T ss_pred EEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC-----------CCcc
Confidence 9999986421 122334443 3 346899999866532111 1234
Q ss_pred c-hhhhhHHHHHhh------cCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLES------KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~~------~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+. .+++++.++||++.++.
T Consensus 157 Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~ 193 (255)
T PRK05717 157 YAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARD 193 (255)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCc
Confidence 6 899988876532 35899999999998853
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-15 Score=114.03 Aligned_cols=143 Identities=15% Similarity=0.095 Sum_probs=101.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+.++..... ..+.....++.++.+|+.|++++.++++.. .+|+
T Consensus 12 tGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 86 (251)
T PRK12826 12 TGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATA-----ELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDI 86 (251)
T ss_pred cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999864321110 111222346889999999999998887642 6999
Q ss_pred EEeccCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~~----~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++.... +...+++++ . +.+++|++||...++.. ..+...|
T Consensus 87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~----------~~~~~~y 156 (251)
T PRK12826 87 LVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVG----------YPGLAHY 156 (251)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccC----------CCCccHH
Confidence 9999976421 122344333 3 56789999997665111 1123346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|..++.+++ ..+++++++|||+++|+.
T Consensus 157 ~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~ 193 (251)
T PRK12826 157 AASKAGLVGFTRALALELAARNITVNSVHPGGVDTPM 193 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcch
Confidence 88888777653 358999999999999985
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.4e-16 Score=119.30 Aligned_cols=167 Identities=14% Similarity=0.176 Sum_probs=107.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|++++++|+++|++|++++|+.+...... .++.....++.++.+|+.|.+++.++++.. ++|+
T Consensus 12 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~ 86 (287)
T PRK06194 12 TGAASGFGLAFARIGAALGMKLVLADVQQDALDRAV-----AELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHL 86 (287)
T ss_pred eCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999755422111 111111346788999999999998887632 5899
Q ss_pred EEeccCCCccc--------------------h----HHHHHhCC--CC------CcEEEEecceecccCCCCCCCCCCCC
Q 029198 76 VYDINGREADE--------------------V----EPILDALP--NL------EQFIYCSSAGVYLKSDLLPHCETDTV 123 (197)
Q Consensus 76 vi~~a~~~~~~--------------------~----~~ll~~~~--~~------~~~v~~Ss~~vyg~~~~~~~~e~~~~ 123 (197)
|||+||....+ + +.++..+. .. .++|++||...+....
T Consensus 87 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------- 156 (287)
T PRK06194 87 LFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP---------- 156 (287)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC----------
Confidence 99999874211 1 22222232 22 5899999976653221
Q ss_pred CCCCcc-hhhhhHHHHHhh---------cCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 124 DPKSRH-KGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 124 ~~~~~~-~~k~~~e~~~~~---------~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+...| .+|...+.+.+. .++++..+.||++..+- .....+++..+++++.+.++|+|++
T Consensus 157 -~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~----------~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
T PRK06194 157 -AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI----------WQSERNRPADLANTAPPTRSQLIAQ 225 (287)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc----------ccccccCchhcccCccccchhhHHH
Confidence 22356 889998877532 24667777777665441 1122344455566666666666553
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.1e-15 Score=113.29 Aligned_cols=138 Identities=17% Similarity=0.192 Sum_probs=99.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++.. .. + ..++.....++.++.+|+.|.+++.++++. .++|+
T Consensus 14 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~-~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 87 (260)
T PRK12823 14 TGAAQGIGRGVALRAAAEGARVVLVDRSELV-HE-V----AAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDV 87 (260)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCchHH-HH-H----HHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeE
Confidence 7999999999999999999999999997421 10 0 011122234678899999999888877653 26999
Q ss_pred EEeccCCCc--c-----------------------chHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREA--D-----------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~--~-----------------------~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+|+... . .++.+++.++ +..+||++||...++. +...
T Consensus 88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------------~~~~ 154 (260)
T PRK12823 88 LINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI-------------NRVP 154 (260)
T ss_pred EEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC-------------CCCc
Confidence 999997421 0 0234555554 4578999999776531 1224
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..+++++.++||++++|
T Consensus 155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 191 (260)
T PRK12823 155 YSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAP 191 (260)
T ss_pred cHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCc
Confidence 6 88998887653 24899999999999997
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.8e-15 Score=113.65 Aligned_cols=139 Identities=19% Similarity=0.204 Sum_probs=99.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|++++++|+++|++|+++.|+++...... .....++.++.+|+.|.+++.+++++ .++|+
T Consensus 8 tGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 8 TGASSGFGRGMTERLLARGDRVAATVRRPDALDDLK--------ARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865422110 01124688999999999988887653 26899
Q ss_pred EEeccCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~~----~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||++|.... ++.++++++ + +..+||++||...... ..+...|
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y 148 (276)
T PRK06482 80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA-----------YPGFSLY 148 (276)
T ss_pred EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC-----------CCCCchh
Confidence 9999986421 133344443 4 5679999999654211 1123456
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEcccee---eCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYI---YGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i---~g~~ 158 (197)
.+|...|.+++ .++++++++|||.+ ||++
T Consensus 149 ~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~ 188 (276)
T PRK06482 149 HATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAG 188 (276)
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCccc
Confidence 89999887653 35899999999988 5543
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.9e-16 Score=129.19 Aligned_cols=127 Identities=20% Similarity=0.159 Sum_probs=99.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+||+|++|++.|.++|++|... .+|+.|.+.+...+...++|+|||+|
T Consensus 386 tGa~G~iG~~l~~~L~~~g~~v~~~-----------------------------~~~l~d~~~v~~~i~~~~pd~Vih~A 436 (668)
T PLN02260 386 YGRTGWIGGLLGKLCEKQGIAYEYG-----------------------------KGRLEDRSSLLADIRNVKPTHVFNAA 436 (668)
T ss_pred ECCCchHHHHHHHHHHhCCCeEEee-----------------------------ccccccHHHHHHHHHhhCCCEEEECC
Confidence 7999999999999999999887310 13467888888888877999999999
Q ss_pred CCCc-------------------cchHHHHHhCC--CCCcEEEEecceecccC------CCCCCCCCCCCCCC-Ccc-hh
Q 029198 81 GREA-------------------DEVEPILDALP--NLEQFIYCSSAGVYLKS------DLLPHCETDTVDPK-SRH-KG 131 (197)
Q Consensus 81 ~~~~-------------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~------~~~~~~e~~~~~~~-~~~-~~ 131 (197)
+... .++.+++++++ ++ +++++||..+|+.. ...+++|++.+.|. +.| .+
T Consensus 437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~s 515 (668)
T PLN02260 437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKT 515 (668)
T ss_pred cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHH
Confidence 8641 13677899888 66 57788888888631 12467888776654 678 99
Q ss_pred hhhHHHHHhhcCCcEEEEccceeeCCC
Q 029198 132 KLNTESVLESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 132 k~~~e~~~~~~~~~~~i~r~~~i~g~~ 158 (197)
|..+|.+++.+ .++.++|+.++|+.+
T Consensus 516 K~~~E~~~~~~-~~~~~~r~~~~~~~~ 541 (668)
T PLN02260 516 KAMVEELLREY-DNVCTLRVRMPISSD 541 (668)
T ss_pred HHHHHHHHHhh-hhheEEEEEEecccC
Confidence 99999999876 578899999999753
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-15 Score=113.49 Aligned_cols=143 Identities=17% Similarity=0.200 Sum_probs=100.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||||++|.+++++|+++|++|+++.|+..+....+. ........++.++.+|+.|++++.++++.. ++|.
T Consensus 12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~ 87 (249)
T PRK12825 12 TGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELV----EAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDI 87 (249)
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH----HHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999888887554211110 111122356889999999999998877532 6899
Q ss_pred EEeccCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~----~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++.... +..++++. ++ +.+++|++||...+.... +...|
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~-----------~~~~y 156 (249)
T PRK12825 88 LVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWP-----------GRSNY 156 (249)
T ss_pred EEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCC-----------CchHH
Confidence 9999985321 11223333 33 678999999977653211 12345
Q ss_pred -hhhhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.++ ++.+++++++|||+++++.
T Consensus 157 ~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~ 193 (249)
T PRK12825 157 AAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDM 193 (249)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCc
Confidence 7887777654 2368999999999999986
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.3e-16 Score=116.10 Aligned_cols=136 Identities=20% Similarity=0.155 Sum_probs=101.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++++.... . ..++.++.+|+.|++++.++++.. ++|+
T Consensus 9 tGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~---------~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 9 TGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL---------A--SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------H--hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999999999999999999986542211 1 135788999999999998887632 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||++|....+ ++.+++.++ +..++|++||...+.... ....|
T Consensus 78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y 146 (273)
T PRK06182 78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTP-----------LGAWY 146 (273)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCC-----------CccHh
Confidence 99999864211 345566665 567999999965321110 12246
Q ss_pred -hhhhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+. ...++++++++||++.++.
T Consensus 147 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 183 (273)
T PRK06182 147 HATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEW 183 (273)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCEEEEEecCCccccc
Confidence 8898888764 3468999999999998874
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.4e-15 Score=112.11 Aligned_cols=144 Identities=19% Similarity=0.166 Sum_probs=98.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc-cCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|++|++++++|+++|++|++++|+.......+. ..+... ...+.++.+|+.|.+++.++++.. ++|
T Consensus 12 tGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 87 (249)
T PRK09135 12 TGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALA----AELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLD 87 (249)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 7999999999999999999999999997543211110 011111 135889999999999998887642 689
Q ss_pred EEEeccCCCc--------------------cchHHHHHhCC-----CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 75 VVYDINGREA--------------------DEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 75 ~vi~~a~~~~--------------------~~~~~ll~~~~-----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+|||+++... .++.++++++. ....++.+++. . +..+..+...|
T Consensus 88 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~~~Y 156 (249)
T PRK09135 88 ALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDI--H---------AERPLKGYPVY 156 (249)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeCh--h---------hcCCCCCchhH
Confidence 9999998521 12344555543 22345555431 1 12233455567
Q ss_pred -hhhhhHHHHHhh------cCCcEEEEccceeeCCCC
Q 029198 130 -KGKLNTESVLES------KGVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 130 -~~k~~~e~~~~~------~~~~~~i~r~~~i~g~~~ 159 (197)
.+|..+|.+++. .+++++++||++++||..
T Consensus 157 ~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~ 193 (249)
T PRK09135 157 CAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPED 193 (249)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccc
Confidence 999999987643 268999999999999864
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-15 Score=114.83 Aligned_cols=142 Identities=18% Similarity=0.170 Sum_probs=102.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|++.|++|++++|+++...... ..+.....++.++.+|+.|.+.+.++++. -.+|+
T Consensus 13 tGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 87 (262)
T PRK13394 13 TGAASGIGKEIALELARAGAAVAIADLNQDGANAVA-----DEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDI 87 (262)
T ss_pred ECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-----HHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999875432111 11122234678899999999998887763 24999
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhC-C--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------E----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~-~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+++.... + ++.+++.+ + +.++||++||...+... .+...
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~ 156 (262)
T PRK13394 88 LVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS-----------PLKSA 156 (262)
T ss_pred EEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC-----------CCCcc
Confidence 9999986321 1 44567777 4 57899999996543211 12234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++++||++++++.
T Consensus 157 y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~ 194 (262)
T PRK13394 157 YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPL 194 (262)
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchh
Confidence 5 78888776553 258999999999999984
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-15 Score=114.00 Aligned_cols=142 Identities=19% Similarity=0.247 Sum_probs=102.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++++..... .++.....++.++.+|+.|++++.++++. ..+|+
T Consensus 10 tG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 84 (258)
T PRK12429 10 TGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAA-----EALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDI 84 (258)
T ss_pred ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999876532111 11112235688999999999999887763 26999
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++.... + ++.+++.++ +.++||++||...+.... +...|
T Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~-----------~~~~y 153 (258)
T PRK12429 85 LVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSA-----------GKAAY 153 (258)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCC-----------Ccchh
Confidence 9999985321 1 445666665 578999999965442211 22345
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++++|||+++++.
T Consensus 154 ~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~ 190 (258)
T PRK12429 154 VSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPL 190 (258)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchh
Confidence 67777765542 357999999999999874
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-15 Score=115.88 Aligned_cols=135 Identities=14% Similarity=0.225 Sum_probs=101.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc------Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~------~~d 74 (197)
|||+|++|.+++++|+++|++|++++|+++.... +. ..+++++.+|+.|.+++.++++.. .+|
T Consensus 10 tGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~---------l~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id 78 (277)
T PRK05993 10 TGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA---------LE--AEGLEAFQLDYAEPESIAALVAQVLELSGGRLD 78 (277)
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HH--HCCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence 7999999999999999999999999998655221 11 135788999999999888877632 689
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+|||+||....+ ++.+++.++ +..+||++||...+.. ..+...
T Consensus 79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~ 147 (277)
T PRK05993 79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP-----------MKYRGA 147 (277)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC-----------CCccch
Confidence 999999864211 455677776 5679999999654321 112345
Q ss_pred c-hhhhhHHHHH-------hhcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+. +..|+++++++||.+-.+
T Consensus 148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 6 8999998875 346899999999998765
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.3e-15 Score=110.94 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=99.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+.....++.++.+|+.|.+++.++++.. .+|+
T Consensus 12 tGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 86 (250)
T PRK07774 12 TGAAGGIGQAYAEALAREGASVVVADINAEGAERVA-----KQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDY 86 (250)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999865421110 111112236788999999999888777632 6899
Q ss_pred EEeccCCCcc-----------------------chHH----HHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD-----------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 76 vi~~a~~~~~-----------------------~~~~----ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 126 (197)
|||++|.... +..+ +++.+. +.++||++||...|. +.
T Consensus 87 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--------------~~ 152 (250)
T PRK07774 87 LVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL--------------YS 152 (250)
T ss_pred EEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC--------------Cc
Confidence 9999986310 1112 233332 356999999977753 23
Q ss_pred Ccc-hhhhhHHHHHhh-------cCCcEEEEccceeeCCCC
Q 029198 127 SRH-KGKLNTESVLES-------KGVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~~-------~~~~~~i~r~~~i~g~~~ 159 (197)
+.| .+|...+.+++. .++++++++||.+..+..
T Consensus 153 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~ 193 (250)
T PRK07774 153 NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEAT 193 (250)
T ss_pred cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccc
Confidence 456 899998887532 479999999999988753
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.7e-15 Score=113.84 Aligned_cols=138 Identities=18% Similarity=0.190 Sum_probs=99.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++++...... ....++..+.+|+.|.+++.++++.. ++|+
T Consensus 10 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~--------~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 10 TGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA--------LHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred ecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh--------hcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 7999999999999999999999999998654321110 01235788999999999988877642 5899
Q ss_pred EEeccCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~----~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||++|.... ++.+++++ ++ +..++|++||...+... .+...|
T Consensus 82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~-----------~~~~~Y 150 (277)
T PRK06180 82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM-----------PGIGYY 150 (277)
T ss_pred EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC-----------CCcchh
Confidence 9999987421 12233333 43 45689999997654221 123456
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..+++++++|||++.++
T Consensus 151 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~ 186 (277)
T PRK06180 151 CGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTD 186 (277)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccC
Confidence 88888877653 35899999999999775
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.9e-15 Score=116.69 Aligned_cols=149 Identities=21% Similarity=0.150 Sum_probs=101.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... ....++.++.+|+.|.++++++++. .++|+
T Consensus 32 TGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~---------~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 32 TGGYSGLGLETTRALAQAGAHVIVPARRPDVAREAL---------AGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---------HHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence 799999999999999999999999999865422111 0012478899999999998887753 36999
Q ss_pred EEeccCCCcc-------c---------------hHHHHHhCC--CCCcEEEEecceecccC-CCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREAD-------E---------------VEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~-------~---------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~-~~~~~~e~~~~~~~~~~- 129 (197)
|||+||.... . ++.++..++ +..++|++||....... .........+..+...|
T Consensus 103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~ 182 (315)
T PRK06196 103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYG 182 (315)
T ss_pred EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHH
Confidence 9999986311 0 334555554 44799999996543211 10000001122233346
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++++++++||++.++.
T Consensus 183 ~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~ 218 (315)
T PRK06196 183 QSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPL 218 (315)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCc
Confidence 89998877642 358999999999999874
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.7e-15 Score=112.07 Aligned_cols=140 Identities=15% Similarity=0.167 Sum_probs=101.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|+++.|+.+....... .+ ....++.++.+|+.|++++.++++. .++|+
T Consensus 11 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 84 (252)
T PRK06138 11 TGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAA-----AI-AAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV 84 (252)
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHH-----HH-hcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998654221110 01 1134688999999999999887764 27999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEeccee-cccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+++..... .+.++++++ +.++|+++||... ++.. +...
T Consensus 85 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~------------~~~~ 152 (252)
T PRK06138 85 LVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGR------------GRAA 152 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCC------------CccH
Confidence 99999863211 133445554 5679999999654 3211 1234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++++|||+++++.
T Consensus 153 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (252)
T PRK06138 153 YVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPY 190 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcc
Confidence 6 88888877653 248999999999999874
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.7e-15 Score=111.50 Aligned_cols=142 Identities=20% Similarity=0.260 Sum_probs=98.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|++++++|+++|++|++++|+++...... ..+.....++.++.+|+.|.+++.++++. .++|.
T Consensus 7 tGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 7 TGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAA-----KVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred cCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999865421110 11111224688999999999977766542 26899
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++.... + ++.+++.++ +.+++|++||...+.... ....|
T Consensus 82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~-----------~~~~y 150 (255)
T TIGR01963 82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASP-----------FKSAY 150 (255)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCC-----------CCchh
Confidence 9999986321 0 222344444 567999999976543211 12345
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++++||++++++.
T Consensus 151 ~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~ 187 (255)
T TIGR01963 151 VAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPL 187 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence 77877776553 248999999999999874
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=1e-14 Score=100.49 Aligned_cols=142 Identities=23% Similarity=0.363 Sum_probs=106.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+||||.+|+.|++++.++||+|++++|++.+.... +++.+.+.|+.|++++.+.+. +.|+||..-
T Consensus 6 IgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------------~~~~i~q~Difd~~~~a~~l~--g~DaVIsA~ 70 (211)
T COG2910 6 IGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------------QGVTILQKDIFDLTSLASDLA--GHDAVISAF 70 (211)
T ss_pred EecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------------ccceeecccccChhhhHhhhc--CCceEEEec
Confidence 59999999999999999999999999998884321 468899999999999999998 999999875
Q ss_pred CCCccc--------hHHHHHhCC--CCCcEEEEeccee-cccCCCCCCCCCCCCCCCCcc-hhhhhHHH--HHh-hcCCc
Q 029198 81 GREADE--------VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRH-KGKLNTES--VLE-SKGVN 145 (197)
Q Consensus 81 ~~~~~~--------~~~ll~~~~--~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~~~-~~k~~~e~--~~~-~~~~~ 145 (197)
+..... .+.+++.++ ++.|++.++..+. |-++.. .-.+.+.-|..++ ..+..+|. .++ ...++
T Consensus 71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~--rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~ 148 (211)
T COG2910 71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGT--RLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLD 148 (211)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCc--eeecCCCCchhHHHHHHHHHHHHHHHhhccCcc
Confidence 543222 455888887 7899999988664 333332 1233344455565 55666663 343 35599
Q ss_pred EEEEccceeeCCCC
Q 029198 146 WTSLRPVYIYGPLN 159 (197)
Q Consensus 146 ~~i~r~~~i~g~~~ 159 (197)
||.+.|+..|-|+.
T Consensus 149 WTfvSPaa~f~PGe 162 (211)
T COG2910 149 WTFVSPAAFFEPGE 162 (211)
T ss_pred eEEeCcHHhcCCcc
Confidence 99999999999874
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4e-15 Score=111.48 Aligned_cols=151 Identities=14% Similarity=0.096 Sum_probs=102.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh--ccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|++|.++++.|+++|++|++++|+++....... .+.. ....+.++.+|+.|++++.++++.. ++
T Consensus 10 tGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i 84 (256)
T PRK09186 10 TGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLE-----SLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKI 84 (256)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHH-----HHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Confidence 7999999999999999999999999998655321110 0100 1234677899999999998887632 38
Q ss_pred cEEEeccCCCcc---------------------------chHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD---------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 74 d~vi~~a~~~~~---------------------------~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
|+|||+|+.... .++.+++.++ +..++|++||...+..... +..++.+..
T Consensus 85 d~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~~~~~ 163 (256)
T PRK09186 85 DGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-EIYEGTSMT 163 (256)
T ss_pred cEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-hhccccccC
Confidence 999999964210 1344566665 5679999999664432221 112222222
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
....| .+|...+.+.+ ..++++++++||+++++
T Consensus 164 ~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~ 204 (256)
T PRK09186 164 SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDN 204 (256)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCC
Confidence 22346 88988887653 36799999999998875
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.3e-15 Score=110.90 Aligned_cols=142 Identities=17% Similarity=0.173 Sum_probs=100.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|++++++|++.|++|++++|+.+...... ..+.+...++.++.+|+.|.++++++++. .++|+
T Consensus 9 tGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~ 83 (250)
T TIGR03206 9 TGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVA-----ADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDV 83 (250)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865422110 11122235689999999999998887753 25899
Q ss_pred EEeccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~----~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++.... +. +.+++.++ +.++++++||...+..... ...|
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~-----------~~~Y 152 (250)
T TIGR03206 84 LVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG-----------EAVY 152 (250)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC-----------CchH
Confidence 9999985311 11 12344443 5678999999877643221 2246
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|.+.+.+.+ ..++++++++||+++++.
T Consensus 153 ~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~ 189 (250)
T TIGR03206 153 AACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTAL 189 (250)
T ss_pred HHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence 88877766553 248999999999999873
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.6e-15 Score=110.70 Aligned_cols=139 Identities=20% Similarity=0.186 Sum_probs=100.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|++++++|+++|++|++++|+++...... ......+.++.+|+.|++++.++++. .++|+
T Consensus 9 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 9 TGASRGFGRAWTEAALERGDRVVATARDTATLADLA--------EKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865422110 01124678889999999998877653 26899
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||++|....+ ++.++..++ +.+++|++||...+.... ....|
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~~Y 149 (275)
T PRK08263 81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP-----------MSGIY 149 (275)
T ss_pred EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC-----------CccHH
Confidence 99999864221 233444444 567999999976653221 12346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..|++++++|||++..+.
T Consensus 150 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~ 186 (275)
T PRK08263 150 HASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDW 186 (275)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCc
Confidence 88988776552 368999999999987764
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.4e-15 Score=110.50 Aligned_cols=142 Identities=17% Similarity=0.160 Sum_probs=99.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++...... .++.....++.++.+|+.|.+++.++++.. ++|+
T Consensus 11 tGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~ 85 (258)
T PRK07890 11 SGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVA-----AEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDA 85 (258)
T ss_pred ECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccE
Confidence 799999999999999999999999999865422110 111111246889999999999988777542 6899
Q ss_pred EEeccCCCcc---------------------chHHHHHh----CC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD---------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~---------------------~~~~ll~~----~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++.... +...++++ ++ ...+||++||...+... .+...|
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~~~Y 154 (258)
T PRK07890 86 LVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQ-----------PKYGAY 154 (258)
T ss_pred EEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCC-----------CCcchh
Confidence 9999986311 01223333 22 33589999997653211 123346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+++ ..++++++++||+++++.
T Consensus 155 ~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~ 191 (258)
T PRK07890 155 KMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDP 191 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHH
Confidence 88888887654 248999999999999984
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.4e-14 Score=108.81 Aligned_cols=168 Identities=15% Similarity=0.155 Sum_probs=108.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.++++.|+++|++|++++|+.++.+... ..+.....++.++.+|++|++++.++++. ..+|+
T Consensus 18 tGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~ 92 (259)
T PRK08213 18 TGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAA-----AHLEALGIDALWIAADVADEADIERLAEETLERFGHVDI 92 (259)
T ss_pred ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 699999999999999999999999999765422110 11112234678899999999999776653 26899
Q ss_pred EEeccCCCcc--------------------chHHHHHh-----CC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------EVEPILDA-----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~-----~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+++.... +..+++++ +. +..+||++||...+...... ..+...
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-------~~~~~~ 165 (259)
T PRK08213 93 LVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-------VMDTIA 165 (259)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-------ccCcch
Confidence 9999986311 12233333 22 45689999997654322110 012345
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 181 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (197)
| .+|...+.+++ ..++++++++|+++-.+.. ...++.+.+.+....+...++
T Consensus 166 Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~-~~~~~~~~~~~~~~~~~~~~~ 225 (259)
T PRK08213 166 YNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMT-RGTLERLGEDLLAHTPLGRLG 225 (259)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcch-hhhhHHHHHHHHhcCCCCCCc
Confidence 6 88999888764 2579999999998876632 223333444444444444343
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.8e-15 Score=111.73 Aligned_cols=142 Identities=16% Similarity=0.128 Sum_probs=98.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.++++.|+++|++|++++|+++........ .........+.++.+|+.|++++.+ ++. ..+|+
T Consensus 9 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~ 84 (280)
T PRK06914 9 TGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQ---ATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDL 84 (280)
T ss_pred ECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHH---HHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeE
Confidence 79999999999999999999999999986543211000 0000112468899999999998876 432 26899
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeccee-cccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+++.... + .+.+++.++ +..++|++||... ++.. +...
T Consensus 85 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~~~ 152 (280)
T PRK06914 85 LVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFP------------GLSP 152 (280)
T ss_pred EEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCC------------CCch
Confidence 9999986321 1 223334455 5678999998643 3321 2334
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+++ ..+++++++|||.+.++.
T Consensus 153 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (280)
T PRK06914 153 YVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNI 190 (280)
T ss_pred hHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence 6 78888877653 358999999999998873
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=8.6e-15 Score=109.28 Aligned_cols=141 Identities=15% Similarity=0.185 Sum_probs=101.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++........ .+.. ..++.++.+|+.|++++.++++.. ++|+
T Consensus 11 tGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 84 (251)
T PRK07231 11 TGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAA-----EILA-GGRAIAVAADVSDEADVEAAVAAALERFGSVDI 84 (251)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 7999999999999999999999999998755321110 0111 245889999999999998887643 6899
Q ss_pred EEeccCCCccc-------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE-------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~-------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+++..... ++.+++.+. +.++||++||...+.... +...
T Consensus 85 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~ 153 (251)
T PRK07231 85 LVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRP-----------GLGW 153 (251)
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCC-----------CchH
Confidence 99999863210 233445554 567899999977654221 2334
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 154 y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~ 191 (251)
T PRK07231 154 YNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGL 191 (251)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCc
Confidence 6 78888776543 348999999999997763
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=8.6e-15 Score=110.94 Aligned_cols=141 Identities=17% Similarity=0.142 Sum_probs=98.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+.+...... ..+.....++.++.+|+.+.+++.++++. ..+|+
T Consensus 16 tGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 90 (274)
T PRK07775 16 AGASSGIGAATAIELAAAGFPVALGARRVEKCEELV-----DKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEV 90 (274)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999998754321110 11111224678889999999999887763 26899
Q ss_pred EEeccCCCcc--------------------chHHH----HHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------EVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~l----l~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++.... ++.++ ++.++ +..+||++||...+.... +...|
T Consensus 91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y 159 (274)
T PRK07775 91 LVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP-----------HMGAY 159 (274)
T ss_pred EEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC-----------CcchH
Confidence 9999986421 11122 23232 456899999976654221 23346
Q ss_pred -hhhhhHHHHHhh-------cCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLES-------KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~~-------~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+. .+++++++|||.+.++
T Consensus 160 ~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~ 195 (274)
T PRK07775 160 GAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTG 195 (274)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCc
Confidence 889998887642 3899999999988654
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.7e-14 Score=105.60 Aligned_cols=130 Identities=19% Similarity=0.200 Sum_probs=97.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc----cCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~----~~~d~v 76 (197)
|||+|++|.+++++|+++|++|++++|+.+.. ....++.+|+.|.+++.++++. .++|+|
T Consensus 9 tG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~v 72 (234)
T PRK07577 9 TGATKGIGLALSLRLANLGHQVIGIARSAIDD----------------FPGELFACDLADIEQTAATLAQINEIHPVDAI 72 (234)
T ss_pred ECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEE
Confidence 79999999999999999999999999986541 0125788999999888776652 368999
Q ss_pred EeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 77 YDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 77 i~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
||+++..... .+.++..++ +..++|++||...|+... ...|
T Consensus 73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~Y~ 140 (234)
T PRK07577 73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALD------------RTSYS 140 (234)
T ss_pred EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCC------------chHHH
Confidence 9999863211 233445554 567999999987664321 2345
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++++++++||.+..+.
T Consensus 141 ~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 176 (234)
T PRK07577 141 AAKSALVGCTRTWALELAEYGITVNAVAPGPIETEL 176 (234)
T ss_pred HHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence 88888877653 358999999999998764
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.7e-15 Score=109.01 Aligned_cols=142 Identities=17% Similarity=0.193 Sum_probs=98.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEE-ecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|++|.+++++|+++|++|+++ .|+.+...... ..+.....++.++.+|+.|++++.++++.. .+|
T Consensus 10 tGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (250)
T PRK08063 10 TGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETA-----EEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLD 84 (250)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 7999999999999999999998774 66544321100 111222356889999999999998887643 689
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+|||+++..... .+.+++.++ +.++||++||...+.. ..+...
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~ 153 (250)
T PRK08063 85 VFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY-----------LENYTT 153 (250)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----------CCCccH
Confidence 999999853211 122333333 4569999999665321 112334
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++.++||++..+.
T Consensus 154 y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~ 191 (250)
T PRK08063 154 VGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDA 191 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence 6 88999988763 368999999999998764
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-14 Score=108.50 Aligned_cols=142 Identities=20% Similarity=0.225 Sum_probs=97.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEE-ecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc---------
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------- 70 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~--------- 70 (197)
|||+|++|.+++++|+++|++|+++ .|+.++..... ..+......++++.+|+.|++++.+++++
T Consensus 12 tGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~ 86 (254)
T PRK12746 12 TGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETI-----REIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRV 86 (254)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcccc
Confidence 7999999999999999999999876 56543321111 01111124688899999999999887763
Q ss_pred --cCccEEEeccCCCccc--------------------hHHHHHh----CCCCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 71 --KGFDVVYDINGREADE--------------------VEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 71 --~~~d~vi~~a~~~~~~--------------------~~~ll~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
.++|+|||++|....+ +.++++. ++...++|++||..++... .
T Consensus 87 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~-----------~ 155 (254)
T PRK12746 87 GTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF-----------T 155 (254)
T ss_pred CCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC-----------C
Confidence 2699999999874221 1122232 2333589999997775321 1
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+...| .+|...+.+.+ ..++++++++||++.++.
T Consensus 156 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~ 197 (254)
T PRK12746 156 GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI 197 (254)
T ss_pred CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcc
Confidence 23346 88988887642 357999999999998874
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.4e-15 Score=108.76 Aligned_cols=142 Identities=17% Similarity=0.171 Sum_probs=104.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc-cCceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
||||+.||.+++++|+++|++|++++|+.++..... .++... .-++.++.+|+++++++.++.+. ..+|
T Consensus 12 TGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la-----~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~Id 86 (265)
T COG0300 12 TGASSGIGAELAKQLARRGYNLILVARREDKLEALA-----KELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPID 86 (265)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHH-----HHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCccc
Confidence 899999999999999999999999999988753221 122211 23578999999999988887652 3799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
++||+||....+ +..++.-|. +..+||+++|...|-..+. ...
T Consensus 87 vLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~-----------~av 155 (265)
T COG0300 87 VLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPY-----------MAV 155 (265)
T ss_pred EEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcc-----------hHH
Confidence 999999985322 334455544 5679999999776522111 223
Q ss_pred c-hhhhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...-.+. +..|+.++.+.||.+..+.
T Consensus 156 Y~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f 193 (265)
T COG0300 156 YSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEF 193 (265)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccc
Confidence 5 8888776543 4578999999999998764
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.58 E-value=2e-14 Score=111.42 Aligned_cols=152 Identities=16% Similarity=0.203 Sum_probs=100.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.++...... .+......+.++.+|+.|.+++.++++. .++|+
T Consensus 12 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~ 86 (322)
T PRK07453 12 TGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQ-----ELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDA 86 (322)
T ss_pred EcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccE
Confidence 7999999999999999999999999997654321110 0111124688999999999999887763 25999
Q ss_pred EEeccCCCcc----------c---------------hHHHHHhCC--C--CCcEEEEecceecccCCC----CCC-----
Q 029198 76 VYDINGREAD----------E---------------VEPILDALP--N--LEQFIYCSSAGVYLKSDL----LPH----- 117 (197)
Q Consensus 76 vi~~a~~~~~----------~---------------~~~ll~~~~--~--~~~~v~~Ss~~vyg~~~~----~~~----- 117 (197)
|||+||.... . ++.++..++ + ..+||++||...+..... .+.
T Consensus 87 li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~ 166 (322)
T PRK07453 87 LVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLG 166 (322)
T ss_pred EEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchh
Confidence 9999985211 0 223344444 2 359999999765431100 000
Q ss_pred ---------------CCCCCCCCCCcc-hhhhhHHHHH----hh----cCCcEEEEccceeeCC
Q 029198 118 ---------------CETDTVDPKSRH-KGKLNTESVL----ES----KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 118 ---------------~e~~~~~~~~~~-~~k~~~e~~~----~~----~~~~~~i~r~~~i~g~ 157 (197)
.+..+..|...| .+|...+.+. ++ .++.++.++||++++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 167 DLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred hhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 011123344557 9998765543 22 4799999999999863
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.8e-14 Score=108.02 Aligned_cols=140 Identities=14% Similarity=0.082 Sum_probs=98.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+|++|.+++++|++.|++|++++|+++..... . ........++.++.+|+.|++++.+++. .++|+|||++
T Consensus 8 tGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~-~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~id~vi~~a 81 (257)
T PRK09291 8 TGAGSGFGREVALRLARKGHNVIAGVQIAPQVTAL-R----AEAARRGLALRVEKLDLTDAIDRAQAAE-WDVDVLLNNA 81 (257)
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H----HHHHhcCCcceEEEeeCCCHHHHHHHhc-CCCCEEEECC
Confidence 79999999999999999999999999975432110 0 0011112458899999999999988875 3899999999
Q ss_pred CCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhh
Q 029198 81 GREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL 133 (197)
Q Consensus 81 ~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~ 133 (197)
+....+ ++.++..++ +.++||++||...+... .....| .+|.
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~-----------~~~~~Y~~sK~ 150 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG-----------PFTGAYCASKH 150 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC-----------CCcchhHHHHH
Confidence 853211 223444444 55799999996532111 112345 8898
Q ss_pred hHHHHH-------hhcCCcEEEEccceeeCC
Q 029198 134 NTESVL-------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 134 ~~e~~~-------~~~~~~~~i~r~~~i~g~ 157 (197)
..|.+. +..+++++++|||++..+
T Consensus 151 a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~ 181 (257)
T PRK09291 151 ALEAIAEAMHAELKPFGIQVATVNPGPYLTG 181 (257)
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEecCccccc
Confidence 888754 346899999999987543
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-14 Score=108.92 Aligned_cols=142 Identities=20% Similarity=0.202 Sum_probs=100.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++++..... ..+.....++.++.+|+.|.+++.++++.. .+|+
T Consensus 16 tGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 90 (255)
T PRK07523 16 TGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAA-----ESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDI 90 (255)
T ss_pred ECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999865432111 111122245888999999999998887642 5999
Q ss_pred EEeccCCCcc--------------------chHHHHH----hCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------EVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~----~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++.... +..++++ .+. +..++|++||...... ......|
T Consensus 91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~~~~~~y 159 (255)
T PRK07523 91 LVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA-----------RPGIAPY 159 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC-----------CCCCccH
Confidence 9999986421 1122333 332 4578999998654211 1123346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++++|||++.++.
T Consensus 160 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 196 (255)
T PRK07523 160 TATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPL 196 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCch
Confidence 88988887653 468999999999999884
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3e-14 Score=106.72 Aligned_cols=143 Identities=18% Similarity=0.249 Sum_probs=98.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+........ ...+.....++.++.+|+.|++++.++++.. .+|+
T Consensus 8 tG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (256)
T PRK12745 8 TGGRRGIGLGIARALAAAGFDLAINDRPDDEELAAT----QQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDC 83 (256)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999998754321100 0111112346889999999999888776532 6899
Q ss_pred EEeccCCCcc----------------------chHHHHHh----CC---C-----CCcEEEEecceecccCCCCCCCCCC
Q 029198 76 VYDINGREAD----------------------EVEPILDA----LP---N-----LEQFIYCSSAGVYLKSDLLPHCETD 121 (197)
Q Consensus 76 vi~~a~~~~~----------------------~~~~ll~~----~~---~-----~~~~v~~Ss~~vyg~~~~~~~~e~~ 121 (197)
|||++|.... +..+++++ ++ + ..+++++||...+...
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 154 (256)
T PRK12745 84 LVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS--------- 154 (256)
T ss_pred EEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC---------
Confidence 9999986311 11222222 22 1 4579999996653211
Q ss_pred CCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+...| .+|.+.+.+++ ..++++++++||.+.++.
T Consensus 155 --~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~ 197 (256)
T PRK12745 155 --PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDM 197 (256)
T ss_pred --CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcc
Confidence 123346 88999887653 368999999999999874
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.4e-14 Score=107.51 Aligned_cols=144 Identities=22% Similarity=0.269 Sum_probs=99.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|++.|++|++..++.+.... . .....+.....++.++.+|+.|.+++.++++.. ++|+
T Consensus 61 TGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~ 137 (300)
T PRK06128 61 TGADSGIGRATAIAFAREGADIALNYLPEEEQDA--A-EVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDI 137 (300)
T ss_pred ecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHH--H-HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 7999999999999999999999988776432110 0 000111222346788999999999988877642 6999
Q ss_pred EEeccCCCcc---------------------chHHHHHh----CCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREAD---------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~---------------------~~~~ll~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
|||+||.... +...++++ ++...+||++||...|.... ....|
T Consensus 138 lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~Y~ 206 (300)
T PRK06128 138 LVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP-----------TLLDYA 206 (300)
T ss_pred EEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC-----------CchhHH
Confidence 9999986311 11223333 33335899999987764221 12236
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..|+++++++||++.++.
T Consensus 207 asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~ 242 (300)
T PRK06128 207 STKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPL 242 (300)
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCC
Confidence 88998887753 358999999999999985
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.8e-14 Score=105.06 Aligned_cols=147 Identities=16% Similarity=0.185 Sum_probs=99.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|........... ...+......++.++.+|+.|++++.++++. .++|.
T Consensus 12 tGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 90 (249)
T PRK12827 12 TGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADA-VAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDI 90 (249)
T ss_pred ECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 79999999999999999999999988754332111100 0011122235688999999999998887752 36999
Q ss_pred EEeccCCCcc--------------------chHHHHHhC-----C--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------EVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~~-----~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||++|.... +...+++++ + +..++|++||...+... .+...
T Consensus 91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~ 159 (249)
T PRK12827 91 LVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN-----------RGQVN 159 (249)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC-----------CCCch
Confidence 9999986431 122233332 2 45689999997664321 12234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~~ 159 (197)
| .+|...+.+++ ..+++++++|||++.++..
T Consensus 160 y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~ 198 (249)
T PRK12827 160 YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMA 198 (249)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcc
Confidence 6 88887776543 3589999999999999853
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=5e-14 Score=105.09 Aligned_cols=147 Identities=20% Similarity=0.236 Sum_probs=99.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|++.|++|++++|+.+.....+. ..+.....++.++.+|+.|++++.++++. ..+|+
T Consensus 12 tGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 87 (248)
T PRK07806 12 TGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVV----AEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDA 87 (248)
T ss_pred ECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcE
Confidence 7999999999999999999999999997543111110 11111224678899999999998887753 26999
Q ss_pred EEeccCCCc--------------cchHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHH
Q 029198 76 VYDINGREA--------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE 136 (197)
Q Consensus 76 vi~~a~~~~--------------~~~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e 136 (197)
|||+++... .++.++++++. ...++|++||......... +.. .....| .+|..+|
T Consensus 88 vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~----~~~--~~~~~Y~~sK~a~e 161 (248)
T PRK07806 88 LVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTV----KTM--PEYEPVARSKRAGE 161 (248)
T ss_pred EEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccc----cCC--ccccHHHHHHHHHH
Confidence 999987531 12345555544 3358999998543211100 111 113356 8999999
Q ss_pred HHHhh-------cCCcEEEEccceeeCC
Q 029198 137 SVLES-------KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 137 ~~~~~-------~~~~~~i~r~~~i~g~ 157 (197)
.+++. .++++++++|+.+-++
T Consensus 162 ~~~~~l~~~~~~~~i~v~~v~pg~~~~~ 189 (248)
T PRK07806 162 DALRALRPELAEKGIGFVVVSGDMIEGT 189 (248)
T ss_pred HHHHHHHHHhhccCeEEEEeCCccccCc
Confidence 87643 5799999999877665
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.5e-14 Score=106.34 Aligned_cols=143 Identities=17% Similarity=0.200 Sum_probs=99.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++.+..... ..+.....++.++.+|+.|++++.++++. ..+|+
T Consensus 11 tGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (246)
T PRK05653 11 TGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALA-----AELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDI 85 (246)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999865532111 11122235688999999999988887763 25799
Q ss_pred EEeccCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~~----~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++.... +..++++++ . +.+++|++||...... ..+...|
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~-----------~~~~~~y 154 (246)
T PRK05653 86 LVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG-----------NPGQTNY 154 (246)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC-----------CCCCcHh
Confidence 9999976321 122333333 3 5679999998654211 1123345
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~~ 159 (197)
.+|...+.+.+ ..+++++++||+.++++..
T Consensus 155 ~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~ 192 (246)
T PRK05653 155 SAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMT 192 (246)
T ss_pred HhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcch
Confidence 77877665542 3589999999999999853
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3e-14 Score=106.89 Aligned_cols=141 Identities=18% Similarity=0.193 Sum_probs=100.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|.+|.+++++|+++|++|++++|+++.. +. ...+.....++.++.+|+.+++++.++++. ..+|+
T Consensus 13 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 86 (258)
T PRK08628 13 TGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EF-----AEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDG 86 (258)
T ss_pred eCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HH-----HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999999999999999999986652 11 112222245688999999999999888764 26899
Q ss_pred EEeccCCCccc-----------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREADE-----------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~~-----------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
|||++|..... .+.++..++ ...+|+++||...+... .+...| .
T Consensus 87 vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~Y~~ 155 (258)
T PRK08628 87 LVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ-----------GGTSGYAA 155 (258)
T ss_pred EEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC-----------CCCchhHH
Confidence 99999853210 111223333 44689999996653211 123356 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+|...+.+.+ ..+++++.++||+++++.
T Consensus 156 sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~ 190 (258)
T PRK08628 156 AKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL 190 (258)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence 8999887764 358999999999999974
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.5e-14 Score=106.34 Aligned_cols=142 Identities=15% Similarity=0.135 Sum_probs=101.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|.+|..++++|+++|++|++++|++++..... ..+.+...++.++.+|+.|.+++.++++. .++|+
T Consensus 12 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 86 (241)
T PRK07454 12 TGASSGIGKATALAFAKAGWDLALVARSQDALEALA-----AELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDV 86 (241)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865422110 11112234688999999999988877763 26999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||++|..... ++.+++.++ +..++|++||...++... +...|
T Consensus 87 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~Y 155 (241)
T PRK07454 87 LINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFP-----------QWGAY 155 (241)
T ss_pred EEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCC-----------CccHH
Confidence 99999863210 222334444 457899999987664221 12346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++++|||++-.+.
T Consensus 156 ~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~ 192 (241)
T PRK07454 156 CVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPL 192 (241)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCc
Confidence 88888876642 358999999999987763
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.4e-14 Score=107.43 Aligned_cols=141 Identities=18% Similarity=0.232 Sum_probs=99.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++....... .+.. ..++.++.+|+.|++++.++++. -.+|+
T Consensus 8 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 8 TGASSGIGQALAREYARQGATLGLVARRTDALQAFAA-----RLPK-AARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----hccc-CCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 7999999999999999999999999998654321110 0000 12688999999999999887653 14899
Q ss_pred EEeccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||++|.... + ++.++..++ +..+||++||...+... .....
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~ 150 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL-----------PGAGA 150 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC-----------CCCcc
Confidence 9999986321 0 122444554 55789999986543111 11234
Q ss_pred c-hhhhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+. +..++++++++||.+.++.
T Consensus 151 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 188 (257)
T PRK07024 151 YSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPM 188 (257)
T ss_pred hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCch
Confidence 6 8899988765 3468999999999998874
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.5e-14 Score=104.99 Aligned_cols=138 Identities=17% Similarity=0.209 Sum_probs=99.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.++++.|++.|++|++++|++++..... .....++.++.+|+.|.+++.++++. .++|.
T Consensus 6 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQELK--------DELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865422110 11124688999999999988877653 27999
Q ss_pred EEeccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||++|.... + ++.++..++ +..++|++||...+.. ..+...
T Consensus 78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~ 146 (248)
T PRK10538 78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP-----------YAGGNV 146 (248)
T ss_pred EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC-----------CCCCch
Confidence 9999986310 0 334555554 5678999999654311 112335
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..++.+++++||.+.++
T Consensus 147 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~ 183 (248)
T PRK10538 147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGT 183 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccc
Confidence 6 88888877653 25799999999999865
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.3e-14 Score=108.52 Aligned_cols=135 Identities=17% Similarity=0.131 Sum_probs=96.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+.+..... . ..++.++.+|+.+.+++.++++.. ++|+
T Consensus 7 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~---------~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 7 TGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL---------A--AAGFTAVQLDVNDGAALARLAEELEAEHGGLDV 75 (274)
T ss_pred ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------H--HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999999999999999999986542111 1 134778899999999988877532 6899
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
|||++|....+ ++.++..++ +..++|++||...+... .....|
T Consensus 76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~ 144 (274)
T PRK05693 76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT-----------PFAGAYC 144 (274)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC-----------CCccHHH
Confidence 99999863211 223334444 44689999985543211 012346
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..|++++.++||.+..+
T Consensus 145 ~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 145 ASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence 88888777642 36899999999999765
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-14 Score=106.67 Aligned_cols=140 Identities=19% Similarity=0.223 Sum_probs=99.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++.+...... ++. .....++.+|+.|.+++.++++.. ++|+
T Consensus 13 tGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 13 TGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLP-----GVP--ADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred ECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHH-----HHh--hcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 6999999999999999999999999998654321111 011 134677889999999888877632 6999
Q ss_pred EEeccCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~----~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++.... +..+++++ ++ +.+++|++||...++... +...|
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~y 154 (239)
T PRK12828 86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGP-----------GMGAY 154 (239)
T ss_pred EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCC-----------Ccchh
Confidence 9999885321 12233333 33 567999999987764321 22345
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+++ ..++++..+|||+++++.
T Consensus 155 ~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~ 191 (239)
T PRK12828 155 AAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP 191 (239)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence 77777665542 358999999999999974
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3e-14 Score=105.78 Aligned_cols=142 Identities=20% Similarity=0.229 Sum_probs=99.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++++..... .++.....++.++.+|+.+++++.++++. .++|+
T Consensus 13 tG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 87 (239)
T PRK07666 13 TGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVA-----EEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDI 87 (239)
T ss_pred EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccE
Confidence 799999999999999999999999999865422111 11122234688999999999999888763 27999
Q ss_pred EEeccCCCccc--------------------hHHHH----HhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE--------------------VEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~--------------------~~~ll----~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++..... ...++ ..+. +.+++|++||...+... .+...|
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~Y 156 (239)
T PRK07666 88 LINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA-----------AVTSAY 156 (239)
T ss_pred EEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC-----------CCCcch
Confidence 99999864211 11222 2332 45789999996654221 122345
Q ss_pred -hhhhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.++ +..+++++++|||++.++.
T Consensus 157 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~ 193 (239)
T PRK07666 157 SASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDM 193 (239)
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcc
Confidence 7788776654 2368999999999998863
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=9e-14 Score=104.46 Aligned_cols=134 Identities=18% Similarity=0.199 Sum_probs=97.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|.||.+++++|+++|++|++++|++.... ..++.++.+|+.|++++.++++. .++|+
T Consensus 15 tGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 80 (260)
T PRK06523 15 TGGTKGIGAATVARLLEAGARVVTTARSRPDDL--------------PEGVEFVAADLTTAEGCAAVARAVLERLGGVDI 80 (260)
T ss_pred ECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc--------------CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865411 13578899999999988776542 26899
Q ss_pred EEeccCCCcc----------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~----------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|||++|.... + ++.+++.++ +..++|++||...+... +.+..
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~~~~~ 150 (260)
T PRK06523 81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL----------PESTT 150 (260)
T ss_pred EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC----------CCCcc
Confidence 9999984210 0 123344444 44689999997654211 11234
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..++++++++||++.++.
T Consensus 151 ~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~ 189 (260)
T PRK06523 151 AYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA 189 (260)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence 46 88998887653 358999999999999874
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.8e-14 Score=103.75 Aligned_cols=135 Identities=16% Similarity=0.166 Sum_probs=99.4
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~ 78 (197)
|||+|++|++++++|+++|+ +|++++|++++... ...++.++.+|+.|++++.++++.. .+|+|||
T Consensus 12 tGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 79 (238)
T PRK08264 12 TGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------------LGPRVVPLQLDVTDPASVAAAAEAASDVTILVN 79 (238)
T ss_pred ECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------------cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 79999999999999999998 99999998765321 1246889999999999999888743 4899999
Q ss_pred ccCC-Ccc--------------------chHHHHHh----CC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 79 INGR-EAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 79 ~a~~-~~~--------------------~~~~ll~~----~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
+++. ... +...++++ ++ +..+++++||...+... .+...| .
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~-----------~~~~~y~~ 148 (238)
T PRK08264 80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF-----------PNLGTYSA 148 (238)
T ss_pred CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC-----------CCchHhHH
Confidence 9987 210 12223333 32 45689999997665321 122346 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+|...+.+.+ ..+++++++||+.+.++.
T Consensus 149 sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 149 SKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence 8888876643 358999999999997763
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.4e-14 Score=104.86 Aligned_cols=143 Identities=17% Similarity=0.112 Sum_probs=95.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|+...++.+...... ...+.....++.++.+|+.|.+++.++++.. .+|+
T Consensus 8 tG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 83 (248)
T PRK06123 8 TGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAV----VQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDA 83 (248)
T ss_pred ECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHH----HHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999888775433211110 0111222346788999999999988877632 6899
Q ss_pred EEeccCCCccc---------------------hHHHHHhCC-----C----CCcEEEEecce-ecccCCCCCCCCCCCCC
Q 029198 76 VYDINGREADE---------------------VEPILDALP-----N----LEQFIYCSSAG-VYLKSDLLPHCETDTVD 124 (197)
Q Consensus 76 vi~~a~~~~~~---------------------~~~ll~~~~-----~----~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~ 124 (197)
|||+++..... ...+++++. . ..+++++||.. .++.+..
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~---------- 153 (248)
T PRK06123 84 LVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE---------- 153 (248)
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC----------
Confidence 99999864210 112222221 1 23699999965 4432210
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+++ ..+++++++||++++++.
T Consensus 154 -~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~ 194 (248)
T PRK06123 154 -YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEI 194 (248)
T ss_pred -ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCch
Confidence 1235 88998887653 348999999999999985
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.3e-14 Score=107.84 Aligned_cols=142 Identities=18% Similarity=0.193 Sum_probs=98.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++.+|+.+...... .++.....++.++.+|+.|++++.++++.. ++|+
T Consensus 12 TGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 86 (275)
T PRK05876 12 TGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAV-----NHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDV 86 (275)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865432111 111222345788999999999998887642 5899
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+||.... + ++.++..+. + ..++|++||...+... .+...
T Consensus 87 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 155 (275)
T PRK05876 87 VFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN-----------AGLGA 155 (275)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC-----------CCCch
Confidence 9999986321 1 122333332 2 4689999997665321 12344
Q ss_pred c-hhhhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+. ...++++++++||.+.++.
T Consensus 156 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 193 (275)
T PRK05876 156 YGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNL 193 (275)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccccc
Confidence 6 8888754432 2368999999999998763
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-13 Score=104.08 Aligned_cols=130 Identities=17% Similarity=0.170 Sum_probs=96.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|++.|++|++++|+.... ..+.++.+|+.|++++.++++.. ++|+
T Consensus 12 tGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~ 75 (258)
T PRK06398 12 TGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDI 75 (258)
T ss_pred ECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986541 25788999999999988877632 6999
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||.... + ++.++..++ +..++|++||...+... .+...|
T Consensus 76 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 144 (258)
T PRK06398 76 LVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVT-----------RNAAAY 144 (258)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCC-----------CCCchh
Confidence 9999986321 1 223344443 45789999997664321 123346
Q ss_pred -hhhhhHHHHHhh------cCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLES------KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~~------~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+. .+++++.++||++-.+
T Consensus 145 ~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~ 179 (258)
T PRK06398 145 VTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTP 179 (258)
T ss_pred hhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccch
Confidence 889988877542 2489999999988665
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.1e-14 Score=106.43 Aligned_cols=142 Identities=15% Similarity=0.191 Sum_probs=100.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+.+...... ..+.....++.++.+|+.|++++.++++. ..+|+
T Consensus 6 tGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 6 TGAASGLGRAIALRWAREGWRLALADVNEEGGEETL-----KLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865432111 11112235688899999999988877653 26999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||++|....+ ++.+++.++ +..++|++||...+.... ....|
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~~Y 149 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGP-----------AMSSY 149 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCC-----------CchHH
Confidence 99999864211 233455554 567999999976543211 12345
Q ss_pred -hhhhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+. ...++++++++||++.++.
T Consensus 150 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 186 (270)
T PRK05650 150 NVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNL 186 (270)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCc
Confidence 7888766543 2358999999999998764
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.2e-13 Score=102.83 Aligned_cols=141 Identities=21% Similarity=0.272 Sum_probs=96.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||||++|.+++++|+++|++|+++.|++.+...... ..+.....++.++.+|+.+.+++.++++. .++|+
T Consensus 11 tG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 86 (248)
T PRK05557 11 TGASRGIGRAIAERLAAQGANVVINYASSEAGAEALV----AEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDI 86 (248)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999887653211100 11112235688999999999998887763 26899
Q ss_pred EEeccCCCcc--------------------chHHHHHhC----C--CCCcEEEEecce-ecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~~----~--~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+++.... +..++++++ . +.++++++||.. +++.. ....
T Consensus 87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~------------~~~~ 154 (248)
T PRK05557 87 LVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP------------GQAN 154 (248)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC------------CCch
Confidence 9999986321 122233333 2 446899999854 44321 1234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+++ ..++++++++||++.++
T Consensus 155 y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~ 191 (248)
T PRK05557 155 YAASKAGVIGFTKSLARELASRGITVNAVAPGFIETD 191 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCc
Confidence 5 77887776542 35899999999998665
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.3e-13 Score=102.55 Aligned_cols=143 Identities=20% Similarity=0.226 Sum_probs=97.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|++++++|+++|++|+++.|+.+.....+ ..++.....++.++.+|+.+++++.++++.. ++|+
T Consensus 11 tG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 86 (245)
T PRK12937 11 TGASRGIGAAIARRLAADGFAVAVNYAGSAAAADEL----VAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDV 86 (245)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHH----HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999998887654311110 0112222356889999999999998887642 6999
Q ss_pred EEeccCCCcc--------------------chHHHHHhC----CCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREAD--------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
|||++|.... +...++.++ +...+++++||...+... .+...| .
T Consensus 87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~Y~~ 155 (245)
T PRK12937 87 LVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL-----------PGYGPYAA 155 (245)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC-----------CCCchhHH
Confidence 9999986321 111222222 233589999986553211 122346 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+|...+.+++ ..++.+++++||++-.+.
T Consensus 156 sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~ 190 (245)
T PRK12937 156 SKAAVEGLVHVLANELRGRGITVNAVAPGPVATEL 190 (245)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCch
Confidence 8988887663 247999999999987764
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.9e-14 Score=109.00 Aligned_cols=153 Identities=15% Similarity=0.067 Sum_probs=101.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh--ccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|+||.+++++|+++|++|++++|+.++..... ..+.+ ....+.++.+|+.|.+++.++++.. ++
T Consensus 22 tGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 96 (306)
T PRK06197 22 TGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAA-----ARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRI 96 (306)
T ss_pred cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCC
Confidence 799999999999999999999999999765422111 01111 1246889999999999988877532 69
Q ss_pred cEEEeccCCCcc------------------c----hHHHHHhCC--CCCcEEEEecceec--ccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD------------------E----VEPILDALP--NLEQFIYCSSAGVY--LKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~------------------~----~~~ll~~~~--~~~~~v~~Ss~~vy--g~~~~~~~~e~~~~~~~~ 127 (197)
|+|||+||.... + ++.+++.++ +..+||++||...+ +........+..+..+..
T Consensus 97 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~ 176 (306)
T PRK06197 97 DLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVA 176 (306)
T ss_pred CEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCcHH
Confidence 999999985311 1 445667666 45799999997643 321111111111223344
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEE--EccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTS--LRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i--~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..++++++ +.||++..+.
T Consensus 177 ~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 177 AYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL 217 (306)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence 57 89998887653 24555544 5799987763
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.9e-14 Score=105.22 Aligned_cols=142 Identities=17% Similarity=0.264 Sum_probs=98.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.++++.|+++|++|++++|+.+...... .++.....++.++.+|+.+++++.++++.. ++|+
T Consensus 8 tGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (256)
T PRK08643 8 TGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAA-----DKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV 82 (256)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865422111 111122346788999999999888877632 6899
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+++..... ++.+++.++ + ..++|++||...+.... ....
T Consensus 83 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~ 151 (256)
T PRK08643 83 VVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP-----------ELAV 151 (256)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC-----------CCch
Confidence 99999863211 122333433 2 35899999865432111 1234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..|++++.++||++.++.
T Consensus 152 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 189 (256)
T PRK08643 152 YSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM 189 (256)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence 6 88888876543 368999999999998763
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-13 Score=104.80 Aligned_cols=143 Identities=20% Similarity=0.221 Sum_probs=99.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|++........ ..+.....++.++.+|+.|.+++.++++. .++|+
T Consensus 52 tGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~ 127 (290)
T PRK06701 52 TGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETK----QRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDI 127 (290)
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999997543111110 11111124688999999999988887763 26899
Q ss_pred EEeccCCCcc---------------------chHHHHHhC----CCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREAD---------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~---------------------~~~~ll~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
|||+|+.... +...+++++ +...++|++||...|..... ...|
T Consensus 128 lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~-----------~~~Y~ 196 (290)
T PRK06701 128 LVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET-----------LIDYS 196 (290)
T ss_pred EEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC-----------cchhH
Confidence 9999986311 122233332 32358999999877643221 1235
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||+++.+.
T Consensus 197 ~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~ 232 (290)
T PRK06701 197 ATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPL 232 (290)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcc
Confidence 88888877653 258999999999999874
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.4e-14 Score=105.40 Aligned_cols=137 Identities=17% Similarity=0.112 Sum_probs=97.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||||.+|.+++++|+++|++|++++|+++..... ......+.++.+|+.|++++.++++. .++|+
T Consensus 11 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 11 TGGARGIGLATARALAALGARVAIGDLDEALAKET---------AAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHH---------HHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999976552211 01112578899999999988776653 26899
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||++|..... ++.++..++ +..+||++||...+... .....|
T Consensus 82 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 150 (273)
T PRK07825 82 LVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV-----------PGMATY 150 (273)
T ss_pred EEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC-----------CCCcch
Confidence 99999864211 233445554 56789999997654211 112345
Q ss_pred -hhhhhHHHHH-------hhcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+. +..++++++++||++-.+
T Consensus 151 ~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~ 186 (273)
T PRK07825 151 CASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTE 186 (273)
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcch
Confidence 7887766543 346899999999998654
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=8e-14 Score=104.84 Aligned_cols=140 Identities=19% Similarity=0.230 Sum_probs=95.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++....... ... ..++.++.+|+.|++++.++++. .++|+
T Consensus 17 tGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 89 (264)
T PRK12829 17 TGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAA-----RLP--GAKVTATVADVADPAQVERVFDTAVERFGGLDV 89 (264)
T ss_pred eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHh--cCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 7999999999999999999999999997654221100 000 11468899999999998887764 27999
Q ss_pred EEeccCCC-cc--------------------chH----HHHHhCC--CC-CcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGRE-AD--------------------EVE----PILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~-~~--------------------~~~----~ll~~~~--~~-~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|||+++.. .. ++. .+++.++ +. ++++++||....... .+..
T Consensus 90 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~-----------~~~~ 158 (264)
T PRK12829 90 LVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY-----------PGRT 158 (264)
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC-----------CCCc
Confidence 99999865 11 112 2233333 33 568888774432110 0122
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+++ ..+++++++|||+++++.
T Consensus 159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~ 197 (264)
T PRK12829 159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPR 197 (264)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChH
Confidence 46 88888877653 258999999999999984
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.7e-14 Score=105.73 Aligned_cols=137 Identities=20% Similarity=0.200 Sum_probs=98.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|.+|.+++++|+++|++|+++.++.+.....+ .. .++.++.+|+.|++++.++++.. ++|+
T Consensus 13 tGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l--------~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 13 TGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL--------RE--KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH--------Hh--CCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999998877654322111 11 24788999999999998887642 6899
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||++|.... + ++.+++.++ +..++|++||...++... .....|
T Consensus 83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~----------~~~~~Y 152 (255)
T PRK06463 83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA----------EGTTFY 152 (255)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC----------CCccHh
Confidence 9999986321 0 344555554 457999999976653211 112346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|.+.+.+.+ ..+++++.++||++-.+
T Consensus 153 ~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~ 188 (255)
T PRK06463 153 AITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETD 188 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCc
Confidence 88988887653 35899999999998654
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.5e-13 Score=102.52 Aligned_cols=142 Identities=14% Similarity=0.128 Sum_probs=99.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|++++++|+++|++|++++|++++..... .++.....++.++.+|+.|++++.++++. .++|+
T Consensus 13 tGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 87 (250)
T PRK12939 13 TGAARGLGAAFAEALAEAGATVAFNDGLAAEARELA-----AALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDG 87 (250)
T ss_pred eCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999998765432111 11112234688999999999999888764 26999
Q ss_pred EEeccCCCccc--------------------hHHHHHhC----C--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE--------------------VEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~--------------------~~~ll~~~----~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++..... ...+++++ . +..++|++||...+.... ....|
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~y 156 (250)
T PRK12939 88 LVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP-----------KLGAY 156 (250)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC-----------CcchH
Confidence 99999864211 12233332 2 345899999965532211 12235
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++.++.++||.+..+.
T Consensus 157 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~ 193 (250)
T PRK12939 157 VASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEA 193 (250)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCcc
Confidence 78888887653 357999999999987764
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.9e-13 Score=101.93 Aligned_cols=138 Identities=23% Similarity=0.246 Sum_probs=95.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|++++++|+++|++|++++|+++..... ..+...++.++.+|+.|.+++..+++. .++|+
T Consensus 12 tGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 12 TGGTSGIGLETARQFLAEGARVAITGRDPASLEAA--------RAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHH--------HHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 79999999999999999999999999975432111 011124678899999998887766542 26899
Q ss_pred EEeccCCCcc--------------------chHHHHHhC----CCCCcEEEEecc-eecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREAD--------------------EVEPILDAL----PNLEQFIYCSSA-GVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~~----~~~~~~v~~Ss~-~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
|||+++.... ++..+++++ +...++|++||. +.++.. ....|
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~------------~~~~Y~ 151 (249)
T PRK06500 84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP------------NSSVYA 151 (249)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC------------CccHHH
Confidence 9999986321 122333333 323467777774 344321 12356
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+++ ..++++++++||.++++.
T Consensus 152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~ 187 (249)
T PRK06500 152 ASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL 187 (249)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence 88999888763 248999999999999873
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.9e-14 Score=102.82 Aligned_cols=192 Identities=17% Similarity=0.147 Sum_probs=131.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCch-hhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQ-EFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
||-||.-|++|++.|+++||+|.++.|..+...+...+.... +..-.........+|++|...+.+++....|+-|+|+
T Consensus 34 TGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtEiYnL 113 (376)
T KOG1372|consen 34 TGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTEVYNL 113 (376)
T ss_pred ecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchhhhhh
Confidence 799999999999999999999999999988765433222211 1111125678899999999999999998999999999
Q ss_pred cCCCc----------------cchHHHHHhCC-----CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHH-
Q 029198 80 NGREA----------------DEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE- 136 (197)
Q Consensus 80 a~~~~----------------~~~~~ll~~~~-----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e- 136 (197)
|+++. .++..+|++++ ...+|-..||...||.....|-.|..|..|.++| .+|...-
T Consensus 114 aAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~W 193 (376)
T KOG1372|consen 114 AAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYW 193 (376)
T ss_pred hhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHhhhhheE
Confidence 98752 34777888876 3458999999999998888889999999999998 6666543
Q ss_pred ---HHHhhcCCcEEEEccceeeCCCCCCChHHH-HHH---HHHcC-CCcccCCCCceeEEEEEE
Q 029198 137 ---SVLESKGVNWTSLRPVYIYGPLNYNPVEEW-FFH---RLKAG-RPIPIPGSGIQVTQLGHV 192 (197)
Q Consensus 137 ---~~~~~~~~~~~i~r~~~i~g~~~~~~~~~~-~~~---~~~~~-~~~~~~~~g~~~~~~i~v 192 (197)
.+-+++++-.+---..+--.|....+++.. +.+ .+.-| +.....|+-+..+||-|.
T Consensus 194 ivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA 257 (376)
T KOG1372|consen 194 IVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHA 257 (376)
T ss_pred EEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchh
Confidence 233555553332222222334433344432 222 22222 222334666777888764
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.4e-14 Score=105.08 Aligned_cols=141 Identities=22% Similarity=0.242 Sum_probs=100.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|++.|++|++++|++.+..... ..+.....++.++.+|+.|++++.++++.. ++|+
T Consensus 7 tGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 7 TGASEGIGRALAVRLARAGAQLVLAARNETRLASLA-----QELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred ecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865422111 111222346888999999999988877642 6899
Q ss_pred EEeccCCCccc---------------------hHHHHHh----CC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE---------------------VEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~---------------------~~~ll~~----~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++..... ..++++. +. +..++|++||...+... .+...|
T Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y 150 (263)
T PRK06181 82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV-----------PTRSGY 150 (263)
T ss_pred EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC-----------CCccHH
Confidence 99999863211 1122333 23 45789999997765321 122346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..+++++.++||++..+
T Consensus 151 ~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~ 186 (263)
T PRK06181 151 AASKHALHGFFDSLRIELADDGVAVTVVCPGFVATD 186 (263)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccC
Confidence 88988887653 35899999999998765
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.9e-14 Score=103.61 Aligned_cols=141 Identities=20% Similarity=0.227 Sum_probs=97.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|++.|++|++++|++....... ..+... .++.++.+|+.+.+++.++++.. ++|+
T Consensus 12 tGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (237)
T PRK07326 12 TGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAA-----AELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGGLDV 85 (237)
T ss_pred ECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHH-----HHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999999999999765422111 011111 46889999999999988877632 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
|||+++..... ++.+++.++ +..++|++||...+... .+...|
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~y~ 154 (237)
T PRK07326 86 LIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFF-----------AGGAAYN 154 (237)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCC-----------CCCchHH
Confidence 99999763211 111233333 45689999986543211 122335
Q ss_pred hhhhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+. +..+++++++|||++.++.
T Consensus 155 ~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~ 190 (237)
T PRK07326 155 ASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHF 190 (237)
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcc
Confidence 7787766544 2368999999999997763
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.1e-13 Score=101.53 Aligned_cols=142 Identities=18% Similarity=0.229 Sum_probs=94.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEE-ecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
|||+|++|.+++++|+++|++|+++ .|+++...... .++.....++.++.+|+.|++++.++++. ..+|
T Consensus 7 tGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 7 TGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVV-----NLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-----HHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 7999999999999999999999875 45433211110 11122234688899999999999888763 2689
Q ss_pred EEEeccCCCccc---------------------h----HHHHHhCC-----CCCcEEEEecceec-ccCCCCCCCCCCCC
Q 029198 75 VVYDINGREADE---------------------V----EPILDALP-----NLEQFIYCSSAGVY-LKSDLLPHCETDTV 123 (197)
Q Consensus 75 ~vi~~a~~~~~~---------------------~----~~ll~~~~-----~~~~~v~~Ss~~vy-g~~~~~~~~e~~~~ 123 (197)
+|||+++..... + +.++..+. ...+||++||...+ +.+.
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~---------- 151 (247)
T PRK09730 82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG---------- 151 (247)
T ss_pred EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC----------
Confidence 999999863110 0 11222221 13469999997543 2211
Q ss_pred CCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
....| .+|...+.+++ +.+++++++||+++|++.
T Consensus 152 -~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~ 193 (247)
T PRK09730 152 -EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEM 193 (247)
T ss_pred -cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcc
Confidence 11235 78888876653 358999999999999985
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.5e-13 Score=101.54 Aligned_cols=133 Identities=16% Similarity=0.091 Sum_probs=96.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+... . ...++.++.+|+.+++++.++++. .++|+
T Consensus 14 tGas~~iG~~la~~l~~~G~~v~~~~~~~~~---~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 14 TGAAQGIGYAVALAFVEAGAKVIGFDQAFLT---Q-----------EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEecchhh---h-----------cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999997611 0 124688899999999999888763 25899
Q ss_pred EEeccCCCccc--------------------hHHHHHh----CC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE--------------------VEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~--------------------~~~ll~~----~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++..... ...++++ ++ +..++|++||...... ..+...|
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~-----------~~~~~~Y 148 (252)
T PRK08220 80 LVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP-----------RIGMAAY 148 (252)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC-----------CCCCchh
Confidence 99999864211 1112333 33 3458999998654311 1123446
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++++++++||+++++.
T Consensus 149 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 185 (252)
T PRK08220 149 GASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDM 185 (252)
T ss_pred HHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchh
Confidence 88888887652 368999999999999984
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.8e-13 Score=101.67 Aligned_cols=137 Identities=20% Similarity=0.182 Sum_probs=97.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc--CccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~--~~d~vi~ 78 (197)
|||+|++|.+++++|+++|++|++++|+++.... +.....++.++.+|+.|.+++.++++.. .+|.++|
T Consensus 7 tGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 7 TGATSGIGKQLALDYAKQGWQVIACGRNQSVLDE---------LHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred EcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH---------HHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 7999999999999999999999999997654211 1111246888999999999999988742 4789999
Q ss_pred ccCCCc--c------------------chHHHHHhC----CCCCcEEEEecce-ecccCCCCCCCCCCCCCCCCcc-hhh
Q 029198 79 INGREA--D------------------EVEPILDAL----PNLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH-KGK 132 (197)
Q Consensus 79 ~a~~~~--~------------------~~~~ll~~~----~~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~~~-~~k 132 (197)
+++... . +..++++++ ++..++|++||.. .++.. ....| .+|
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~asK 145 (240)
T PRK06101 78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALP------------RAEAYGASK 145 (240)
T ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCC------------CCchhhHHH
Confidence 887421 0 122233332 2335789988854 32211 12346 889
Q ss_pred hhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 133 LNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 133 ~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
...+.+. +..++++++++||+++++.
T Consensus 146 ~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~ 178 (240)
T PRK06101 146 AAVAYFARTLQLDLRPKGIEVVTVFPGFVATPL 178 (240)
T ss_pred HHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCC
Confidence 9888765 3468999999999999874
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=5e-14 Score=106.74 Aligned_cols=142 Identities=21% Similarity=0.165 Sum_probs=99.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|++|.++++.|+++|++|++++|+++...... ..+... ..++.++.+|+.|++++.++++.. ++
T Consensus 13 tGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 87 (276)
T PRK05875 13 TGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAA-----EEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRL 87 (276)
T ss_pred ECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999865422111 011111 246788999999999888877643 78
Q ss_pred cEEEeccCCCcc---------------------chHHHH----HhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD---------------------EVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 74 d~vi~~a~~~~~---------------------~~~~ll----~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 126 (197)
|+|||+++.... +...++ +.+. +..+|+++||...+... .+.
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~~ 156 (276)
T PRK05875 88 HGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH-----------RWF 156 (276)
T ss_pred CEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC-----------CCC
Confidence 999999984310 111222 3332 34589999997764221 123
Q ss_pred Ccc-hhhhhHHHHHhh-------cCCcEEEEccceeeCCC
Q 029198 127 SRH-KGKLNTESVLES-------KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~~-------~~~~~~i~r~~~i~g~~ 158 (197)
..| .+|...|.+++. .+++++++|||++.++.
T Consensus 157 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~ 196 (276)
T PRK05875 157 GAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDL 196 (276)
T ss_pred cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcc
Confidence 456 899999887642 47999999999987763
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.3e-14 Score=104.07 Aligned_cols=142 Identities=19% Similarity=0.266 Sum_probs=100.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|.+|.+++++|++.|++|++++|++++..... .++.....++.++.+|+.+++++.++++.. ++|+
T Consensus 12 tGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 86 (254)
T PRK07478 12 TGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLV-----AEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDI 86 (254)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999865532111 112222346889999999999888877632 7999
Q ss_pred EEeccCCCcc--c-----------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--E-----------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--~-----------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||.... . ++.++..++ +..++|++||...+... ......
T Consensus 87 li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~----------~~~~~~ 156 (254)
T PRK07478 87 AFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAG----------FPGMAA 156 (254)
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccC----------CCCcch
Confidence 9999986311 0 223455554 45689999996554211 012234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..++.++.++||++-.+
T Consensus 157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 193 (254)
T PRK07478 157 YAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTP 193 (254)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCc
Confidence 6 88988887653 35799999999999776
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.5e-13 Score=102.29 Aligned_cols=143 Identities=19% Similarity=0.223 Sum_probs=99.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++........ ........++.++.+|+.|.+++.++++. .++|+
T Consensus 8 tG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~ 83 (245)
T PRK12824 8 TGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWF----EEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDI 83 (245)
T ss_pred eCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHH----HHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6999999999999999999999999998542110000 00111124688999999999988887753 25999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+++..... ++.+++.++ +..+||++||...+.... ....|
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~-----------~~~~Y 152 (245)
T PRK12824 84 LVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQF-----------GQTNY 152 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCC-----------CChHH
Confidence 99999864211 222355554 567999999976653211 12245
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+++ ..++++++++||++.++.
T Consensus 153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 189 (245)
T PRK12824 153 SAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPM 189 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcc
Confidence 88887766542 458999999999998874
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.1e-13 Score=101.45 Aligned_cols=136 Identities=16% Similarity=0.124 Sum_probs=98.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc---------c
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------K 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~---------~ 71 (197)
|||+|++|.+++++|+++|++|++++|+..+.. . .....++.++.+|+.|.+++.+++.. .
T Consensus 7 tGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 7 TGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--A--------AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred ecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--h--------hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 799999999999999999999999999765311 0 11124688999999999988885432 2
Q ss_pred CccEEEeccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 72 GFDVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 72 ~~d~vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
.+|.+||+++.... + ++.+++.+. +..++|++||...+... .
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~ 145 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAY-----------A 145 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCC-----------C
Confidence 58999999886321 0 234455554 45799999997654211 1
Q ss_pred CCCcc-hhhhhHHHHHh------hcCCcEEEEccceeeCC
Q 029198 125 PKSRH-KGKLNTESVLE------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~------~~~~~~~i~r~~~i~g~ 157 (197)
+...| .+|...+.+++ ..+++++.++||.+-.+
T Consensus 146 ~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 146 GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 23456 88998888764 35799999999988554
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.9e-13 Score=102.57 Aligned_cols=141 Identities=16% Similarity=0.117 Sum_probs=98.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+|++|.+++++|+++|++|++++|+........ ..+... ...+.++.+|+.+.+++.++++. ..+
T Consensus 8 tG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i 82 (259)
T PRK12384 8 IGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVA-----QEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV 82 (259)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999765422111 111111 13588999999999988877753 268
Q ss_pred cEEEeccCCCcc--------------------c----hHHHHHhCC--C-CCcEEEEecce-ecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAG-VYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~--------------------~----~~~ll~~~~--~-~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~ 125 (197)
|+|||++|.... + .+.+++.++ + ..++|++||.. .++.. .
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~------------~ 150 (259)
T PRK12384 83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK------------H 150 (259)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC------------C
Confidence 999999986321 1 223444443 3 35899998854 33211 1
Q ss_pred CCcc-hhhhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|.+.+.+. ...+++++++|||+++++.
T Consensus 151 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~ 191 (259)
T PRK12384 151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSP 191 (259)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccch
Confidence 2346 8888876654 2478999999999988764
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-13 Score=103.85 Aligned_cols=141 Identities=13% Similarity=0.158 Sum_probs=100.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|.+|.+++++|++.|++|++++|+ ++... + ...+.....++.++.+|+.+.+++.+++++. .+|+
T Consensus 21 tGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~-~----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~ 94 (258)
T PRK06935 21 TGGNTGLGQGYAVALAKAGADIIITTHG-TNWDE-T----RRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDI 94 (258)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHH-H----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999997 22111 0 0111222356889999999999888877643 6899
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+++..... ++.+++.++ +..++|++||...+.... ....|
T Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y 163 (258)
T PRK06935 95 LVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK-----------FVPAY 163 (258)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC-----------Cchhh
Confidence 99999863210 233444444 457899999976643211 12246
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||++..+.
T Consensus 164 ~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 200 (258)
T PRK06935 164 TASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTAN 200 (258)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccc
Confidence 88998887653 358999999999998764
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.6e-13 Score=102.93 Aligned_cols=142 Identities=15% Similarity=0.178 Sum_probs=98.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|++.|++|++++|+++...... ..+.....++.++.+|+.+++++.++++.. ++|+
T Consensus 15 tGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 89 (258)
T PRK06949 15 TGASSGLGARFAQVLAQAGAKVVLASRRVERLKELR-----AEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDI 89 (258)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 699999999999999999999999999865422111 111112346889999999999988877632 6899
Q ss_pred EEeccCCCcc--------------------chHH----HHHhCC-C---------CCcEEEEecceecccCCCCCCCCCC
Q 029198 76 VYDINGREAD--------------------EVEP----ILDALP-N---------LEQFIYCSSAGVYLKSDLLPHCETD 121 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~----ll~~~~-~---------~~~~v~~Ss~~vyg~~~~~~~~e~~ 121 (197)
|||+++.... +... ++..+. . ..++|++||...+...
T Consensus 90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------- 160 (258)
T PRK06949 90 LVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL--------- 160 (258)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC---------
Confidence 9999985321 0111 222221 1 2589999987654211
Q ss_pred CCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+...| .+|...+.+.+ ..++++++++||+++++.
T Consensus 161 --~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~ 203 (258)
T PRK06949 161 --PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEI 203 (258)
T ss_pred --CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCc
Confidence 123346 78888777653 258999999999999885
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-13 Score=101.33 Aligned_cols=136 Identities=18% Similarity=0.176 Sum_probs=98.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||+|++|.+++++|+++ ++|++++|+.+.... +....++++++.+|+.|++++.++++.. ++|+|||+
T Consensus 9 tG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 9 TGASRGIGAAIARELAPT-HTLLLGGRPAERLDE---------LAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred ecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHH---------HHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 799999999999999999 999999998644211 1111236889999999999999988743 59999999
Q ss_pred cCCCccc------------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhh
Q 029198 80 NGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL 133 (197)
Q Consensus 80 a~~~~~~------------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~ 133 (197)
++..... ++++++.++ ..++++++||...++... +...| .+|.
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~-----------~~~~y~~~K~ 147 (227)
T PRK08219 79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANP-----------GWGSYAASKF 147 (227)
T ss_pred CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCC-----------CCchHHHHHH
Confidence 9863211 344555555 567899999876653211 12345 8888
Q ss_pred hHHHHHhh-----cC-CcEEEEccceeeCC
Q 029198 134 NTESVLES-----KG-VNWTSLRPVYIYGP 157 (197)
Q Consensus 134 ~~e~~~~~-----~~-~~~~i~r~~~i~g~ 157 (197)
..+.+.+. .+ +++..++||.+.++
T Consensus 148 a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~ 177 (227)
T PRK08219 148 ALRALADALREEEPGNVRVTSVHPGRTDTD 177 (227)
T ss_pred HHHHHHHHHHHHhcCCceEEEEecCCccch
Confidence 87766432 24 89999999987665
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.5e-13 Score=103.13 Aligned_cols=138 Identities=17% Similarity=0.162 Sum_probs=98.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.++++.|+++|++|++++|+.+...... ......+.++.+|+.|++++.+++++. .+|+
T Consensus 12 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 12 TGAASGIGEAVAERYLAEGARVVIADIKPARARLAA--------LEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred eCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH--------HHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999866432111 111245888999999999998877642 6999
Q ss_pred EEeccCCCcc--------------------chHHHHHhCC-----C--CCcEEEEecce-ecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD--------------------EVEPILDALP-----N--LEQFIYCSSAG-VYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~~~-----~--~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~ 127 (197)
+||+++.... +..++++++. . ..++|++||.. .++. .+..
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~ 151 (257)
T PRK07067 84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE------------ALVS 151 (257)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC------------CCCc
Confidence 9999985311 1233333332 1 24799999954 3321 1234
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..++++++++||+++++.
T Consensus 152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 190 (257)
T PRK07067 152 HYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPM 190 (257)
T ss_pred hhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchh
Confidence 46 88888777653 368999999999999974
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-13 Score=103.94 Aligned_cols=138 Identities=20% Similarity=0.210 Sum_probs=97.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc------cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~------~~~d 74 (197)
|||+|++|.+++++|+++|++|++++|+.+....... . . ....+.++.+|+.|.+++.++++. .++|
T Consensus 7 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~-~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 7 TGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAA-----E-L-GAGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----H-h-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 7999999999999999999999999998665321100 0 0 024689999999999988887652 2679
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecce-ecccCCCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~ 127 (197)
+|||++|..... ++.+++.++ +..++|++||.. .++... ..
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------~~ 147 (260)
T PRK08267 80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPG------------LA 147 (260)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCC------------ch
Confidence 999999874211 122334444 457899999964 443211 22
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.| .+|...+.+.+ ..++++++++||++-.+
T Consensus 148 ~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~ 185 (260)
T PRK08267 148 VYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTA 185 (260)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCc
Confidence 45 78888776542 35899999999998765
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.5e-14 Score=108.32 Aligned_cols=141 Identities=18% Similarity=0.181 Sum_probs=101.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|.+|.+++++|+++|++|++++|+++...... .++.+...++.++.+|+.|.++++++++.. ++|+
T Consensus 14 TGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~-----~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~ 88 (334)
T PRK07109 14 TGASAGVGRATARAFARRGAKVVLLARGEEGLEALA-----AEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDT 88 (334)
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence 799999999999999999999999999865422111 112222356889999999999998876532 6999
Q ss_pred EEeccCCCcc------------------------chHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~------------------------~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+++.... .++.++..++ +..+||++||...+.... ....|
T Consensus 89 lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~-----------~~~~Y 157 (334)
T PRK07109 89 WVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIP-----------LQSAY 157 (334)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCC-----------cchHH
Confidence 9999986421 1334555555 457899999987764221 12346
Q ss_pred -hhhhhHHHHHh---------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE---------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~---------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..++.+++++||.+.++
T Consensus 158 ~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~ 195 (334)
T PRK07109 158 CAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTP 195 (334)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCc
Confidence 88888766542 14699999999998776
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.6e-13 Score=102.37 Aligned_cols=140 Identities=15% Similarity=0.184 Sum_probs=98.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++.... ...+.....++.++.+|+.+++++.++++. .++|+
T Consensus 11 tGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 11 TGANTGLGQGIAVGLAEAGADIVGAGRSEPSET-------QQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCchHHHH-------HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999998642110 011112234688999999999998877653 26999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||++|..... ++.++..+. + ..++|++||...+.... ....
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~~~~ 152 (248)
T TIGR01832 84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI-----------RVPS 152 (248)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC-----------CCch
Confidence 99999864211 122233332 2 46899999977664321 1224
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++.++||++..+.
T Consensus 153 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 190 (248)
T TIGR01832 153 YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNN 190 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcc
Confidence 5 88988887653 248999999999998774
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-13 Score=105.75 Aligned_cols=142 Identities=18% Similarity=0.224 Sum_probs=99.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+.+...... ..+.+....+.++.+|+.|.+++.++++. -++|+
T Consensus 46 tGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~-----~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~ 120 (293)
T PRK05866 46 TGASSGIGEAAAEQFARRGATVVAVARREDLLDAVA-----DRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDI 120 (293)
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865422110 11112234578899999999988887763 27899
Q ss_pred EEeccCCCccc--------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREADE--------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~~--------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|||+||..... ++.++..++ +..++|++||.+.+.... ....
T Consensus 121 li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------p~~~ 190 (293)
T PRK05866 121 LINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS----------PLFS 190 (293)
T ss_pred EEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC----------CCcc
Confidence 99999864210 122334443 567999999976543210 0123
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.| .+|...+.+.+ ..+++++.++||.+-.+
T Consensus 191 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~ 228 (293)
T PRK05866 191 VYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATP 228 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCc
Confidence 46 88998877643 35899999999987654
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.9e-13 Score=100.18 Aligned_cols=145 Identities=12% Similarity=0.152 Sum_probs=99.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|.||.+++++|++.|++|++++|+.+.....+ ...+.....++..+.+|+.|++++.++++. .++|+
T Consensus 14 tG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~----~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~ 89 (254)
T PRK06114 14 TGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAET----AEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTL 89 (254)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999764321111 011122234678899999999988887763 25899
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||++|.... + .+.++..++ +..++|++||...+..... .+...|
T Consensus 90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------~~~~~Y 160 (254)
T PRK06114 90 AVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG---------LLQAHY 160 (254)
T ss_pred EEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC---------CCcchH
Confidence 9999986321 1 123344444 4568999998654321110 012346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++++++++||++.++.
T Consensus 161 ~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~ 197 (254)
T PRK06114 161 NASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPM 197 (254)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcc
Confidence 88888777643 368999999999998874
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.3e-13 Score=106.43 Aligned_cols=152 Identities=14% Similarity=0.035 Sum_probs=103.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+++||.+++++|+++|++|++.+|+.++..... .++.+. ...+.++.+|+.|.++++++++. .++
T Consensus 20 TGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~-----~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~i 94 (313)
T PRK05854 20 TGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAV-----AAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPI 94 (313)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 799999999999999999999999999866432211 111111 23588999999999999887753 259
Q ss_pred cEEEeccCCCcc--------c---------------hHHHHHhCC-CCCcEEEEeccee-cccCCCCCCCCCCCCCCCCc
Q 029198 74 DVVYDINGREAD--------E---------------VEPILDALP-NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 74 d~vi~~a~~~~~--------~---------------~~~ll~~~~-~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~~ 128 (197)
|++||+||.... + ++.++..++ +..++|++||... ++........+.....+...
T Consensus 95 D~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 174 (313)
T PRK05854 95 HLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAGMRA 174 (313)
T ss_pred cEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcchhh
Confidence 999999986321 1 233444455 4568999999764 33222112222222333445
Q ss_pred c-hhhhhHHHHHh---------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~---------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..++.++.+.||.+-.+
T Consensus 175 Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 175 YSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred hHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 7 89988877542 14699999999999765
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-13 Score=103.20 Aligned_cols=142 Identities=18% Similarity=0.208 Sum_probs=98.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+|++|.+++++|++.|++|++++|++++..... ..+... ...+.++.+|+.+++++.++++. .++
T Consensus 8 tGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (248)
T PRK08251 8 TGASSGLGAGMAREFAAKGRDLALCARRTDRLEELK-----AELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGL 82 (248)
T ss_pred ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999865432110 011111 23688999999999988877653 269
Q ss_pred cEEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEeccee-cccCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 74 d~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~ 126 (197)
|+|||++|..... .+.+++.++ +..++|++||... ++.+ .+.
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~ 151 (248)
T PRK08251 83 DRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLP-----------GVK 151 (248)
T ss_pred CEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCC-----------CCc
Confidence 9999999863221 122333333 5678999999654 3211 123
Q ss_pred Ccc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
..| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 152 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~ 191 (248)
T PRK08251 152 AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEM 191 (248)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchh
Confidence 346 88988876542 247999999999998763
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.5e-13 Score=101.24 Aligned_cols=142 Identities=20% Similarity=0.268 Sum_probs=96.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCcc-CCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
|||+|++|.+++++|+++|++|+++.+...... ..+ .++......+..+.+|+.|.+++.++++. .++|
T Consensus 9 tG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 83 (246)
T PRK12938 9 TGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWL-----EDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEID 83 (246)
T ss_pred ECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 799999999999999999999988654322211 100 11112234677889999999988887753 2689
Q ss_pred EEEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+|||+++.... + ++.+++.++ +..++|++||...... ......
T Consensus 84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~ 152 (246)
T PRK12938 84 VLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-----------QFGQTN 152 (246)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC-----------CCCChh
Confidence 99999987421 1 233444444 4578999998643211 112334
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 153 y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~ 190 (246)
T PRK12938 153 YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 190 (246)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCch
Confidence 6 88887776542 368999999999998874
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.2e-13 Score=103.89 Aligned_cols=141 Identities=18% Similarity=0.208 Sum_probs=99.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh--ccCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+|++|.+++++|+++|++|++++|+++...... .++.. ...++.++.+|+.|++++.++++. .++
T Consensus 13 tGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 87 (260)
T PRK07063 13 TGAAQGIGAAIARAFAREGAAVALADLDAALAERAA-----AAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPL 87 (260)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 799999999999999999999999999765432111 11111 134688899999999988887763 279
Q ss_pred cEEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|++||+||..... ++.++..++ +..++|++||...+... ....
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~ 156 (260)
T PRK07063 88 DVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII-----------PGCF 156 (260)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC-----------CCch
Confidence 9999999863210 233344443 44689999996543211 1122
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.| .+|...+.+.+ ..+++++.++||++-.+
T Consensus 157 ~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~ 194 (260)
T PRK07063 157 PYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQ 194 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCh
Confidence 46 88998887653 35899999999998665
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2e-13 Score=102.28 Aligned_cols=141 Identities=20% Similarity=0.158 Sum_probs=97.6
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCC-ccCCCCCCCchhhhhcc-CceEEEeecCCCHHHHHhhhhc----cCc
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP-IAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSA----KGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~----~~~ 73 (197)
|||+|.+|.+++++|+++| ++|++++|+++. ..... .++.... .+++++.+|+.|++++.++++. .++
T Consensus 14 tGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~-----~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~i 88 (253)
T PRK07904 14 LGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAV-----AQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDV 88 (253)
T ss_pred EcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHH-----HHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Confidence 7999999999999999995 899999998764 21111 1111112 3689999999998886665542 379
Q ss_pred cEEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|++||++|..... ++.+++.++ +..+|+++||...+... .+..
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~-----------~~~~ 157 (253)
T PRK07904 89 DVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVR-----------RSNF 157 (253)
T ss_pred CEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCC-----------CCCc
Confidence 9999988764210 123555665 56899999996532110 1122
Q ss_pred cc-hhhhhHHHH-------HhhcCCcEEEEccceeeCC
Q 029198 128 RH-KGKLNTESV-------LESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~-------~~~~~~~~~i~r~~~i~g~ 157 (197)
.| .+|.....+ ++..++++++++||++..+
T Consensus 158 ~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~ 195 (253)
T PRK07904 158 VYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTR 195 (253)
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecc
Confidence 35 788877644 3457899999999999876
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.3e-13 Score=101.24 Aligned_cols=142 Identities=19% Similarity=0.238 Sum_probs=100.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+|.+|.+++++|+++|++|++++|+.+...... .++... ..++.++.+|+.+++++.++++. .++
T Consensus 15 tGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 89 (257)
T PRK09242 15 TGASKGIGLAIAREFLGLGADVLIVARDADALAQAR-----DELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGL 89 (257)
T ss_pred eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 699999999999999999999999999865422110 111111 24688899999999988777653 268
Q ss_pred cEEEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|+|||++|.... + ++.++..++ +..++|++||...+... .+..
T Consensus 90 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~~ 158 (257)
T PRK09242 90 HILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV-----------RSGA 158 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC-----------CCCc
Confidence 999999986311 1 122334443 45789999997654322 1223
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+++ ..+++++.++||++.++.
T Consensus 159 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~ 197 (257)
T PRK09242 159 PYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPL 197 (257)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcc
Confidence 46 88888887653 358999999999998874
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2e-13 Score=101.61 Aligned_cols=137 Identities=18% Similarity=0.214 Sum_probs=97.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||+|++|.++++.|+++|++|++++|++++... +.+ ..+..++.+|+.+.+++.++++.. .+|+|||+
T Consensus 15 tGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ 84 (245)
T PRK07060 15 TGASSGIGRACAVALAQRGARVVAAARNAAALDR---------LAG-ETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC 84 (245)
T ss_pred eCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHH-HhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence 6999999999999999999999999998654211 111 123667889999999998888742 58999999
Q ss_pred cCCCcc--------------------chHHHHHhC----C--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hh
Q 029198 80 NGREAD--------------------EVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG 131 (197)
Q Consensus 80 a~~~~~--------------------~~~~ll~~~----~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~ 131 (197)
++.... +...+++++ + + ..+||++||...+.... +...| .+
T Consensus 85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~y~~s 153 (245)
T PRK07060 85 AGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP-----------DHLAYCAS 153 (245)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC-----------CCcHhHHH
Confidence 986321 112233332 2 1 36899999976543211 12346 88
Q ss_pred hhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 132 k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
|..++.+.+ ..+++++.+|||+++++.
T Consensus 154 K~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~ 187 (245)
T PRK07060 154 KAALDAITRVLCVELGPHGIRVNSVNPTVTLTPM 187 (245)
T ss_pred HHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCch
Confidence 998887653 357999999999999875
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-13 Score=102.52 Aligned_cols=142 Identities=13% Similarity=0.121 Sum_probs=99.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|.+|.+++++|++.|++|++.+|++++..... .++.....++.++.+|+.|++++.++++. .++|+
T Consensus 15 tGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 89 (254)
T PRK08085 15 TGSAQGIGFLLATGLAEYGAEIIINDITAERAELAV-----AKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDV 89 (254)
T ss_pred ECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999865432111 11111124577889999999988887753 25899
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++..... ++.++..++ +..+||++||...... ..+...|
T Consensus 90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y 158 (254)
T PRK08085 90 LINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELG-----------RDTITPY 158 (254)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccC-----------CCCCcch
Confidence 99999863210 122333333 4568999998643211 1122346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||++.++.
T Consensus 159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~ 195 (254)
T PRK08085 159 AASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEM 195 (254)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcc
Confidence 88988887653 358999999999998874
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.7e-13 Score=102.01 Aligned_cols=141 Identities=16% Similarity=0.118 Sum_probs=97.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhh-hhccCceEEEeecCCCHHHHHhhhhc--cCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~--~~~d~vi 77 (197)
|||+|++|.++++.|+++|++|++++|++++...... .+ .....++.++.+|+.|++++.++++. ..+|++|
T Consensus 7 tGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv 81 (243)
T PRK07102 7 IGATSDIARACARRYAAAGARLYLAARDVERLERLAD-----DLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL 81 (243)
T ss_pred EcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-----HHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence 7999999999999999999999999998754321110 01 11134789999999999999888763 2579999
Q ss_pred eccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 78 DINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 78 ~~a~~~~~--------------------~~----~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
|++|.... +. +.++..+. +..+++++||....... .....| .
T Consensus 82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~ 150 (243)
T PRK07102 82 IAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR-----------ASNYVYGS 150 (243)
T ss_pred ECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC-----------CCCcccHH
Confidence 99875311 11 22333333 46789999986432111 012235 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
+|...+.+.+ +.+++++.++||++.++
T Consensus 151 sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~ 184 (243)
T PRK07102 151 AKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTP 184 (243)
T ss_pred HHHHHHHHHHHHHHHhhccCcEEEEEecCcccCh
Confidence 8888776543 45899999999999887
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.5e-13 Score=101.45 Aligned_cols=138 Identities=15% Similarity=0.226 Sum_probs=97.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|.+|.+++++|+++|++|++++|+.+...... .+...++.++.+|+.|.+++.++++.. .+|+
T Consensus 12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 12 TGGATLIGAAVARALVAAGARVAIVDIDADNGAAVA--------ASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999865422110 111346889999999999988877642 6899
Q ss_pred EEeccCCCccc-----------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREADE-----------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~~-----------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
+||+++..... ++.++..++ +..++|++||........ ....| .
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~~~Y~a 152 (261)
T PRK08265 84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT-----------GRWLYPA 152 (261)
T ss_pred EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----------CCchhHH
Confidence 99999863110 222334443 346899999865431111 12245 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
+|...+.+.+ ..+++++.++||++..+
T Consensus 153 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~ 186 (261)
T PRK08265 153 SKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSR 186 (261)
T ss_pred HHHHHHHHHHHHHHHhcccCEEEEEEccCCccCh
Confidence 8888877653 35899999999988765
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.8e-13 Score=103.69 Aligned_cols=143 Identities=23% Similarity=0.268 Sum_probs=97.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCc-cCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|+||.+++++|+++|++|++..|+.... ...+. ....+...++.++.+|+.|.+++.++++.. ++|
T Consensus 55 TGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 130 (294)
T PRK07985 55 TGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVK----KIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLD 130 (294)
T ss_pred ECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHH----HHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 79999999999999999999999987754321 11110 011112345788999999999888776532 689
Q ss_pred EEEeccCCCcc---------------------ch----HHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 75 VVYDINGREAD---------------------EV----EPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 75 ~vi~~a~~~~~---------------------~~----~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
++||+++.... ++ +.++..++...+||++||...+.... ....|
T Consensus 131 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~-----------~~~~Y 199 (294)
T PRK07985 131 IMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP-----------HLLDY 199 (294)
T ss_pred EEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC-----------Ccchh
Confidence 99999985310 11 12223333235899999977653221 12246
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..|+++..++||++.++.
T Consensus 200 ~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~ 236 (294)
T PRK07985 200 AATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_pred HHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence 88998887653 358999999999999984
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-13 Score=104.16 Aligned_cols=142 Identities=14% Similarity=0.213 Sum_probs=100.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+.+...... .++.....++.++.+|+.|++++.++++. .++|+
T Consensus 16 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~ 90 (278)
T PRK08277 16 TGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVV-----AEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDI 90 (278)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999765422110 11112234688999999999988877653 27999
Q ss_pred EEeccCCCcc------------------------c---------------hHHHHHhCC--CCCcEEEEecceecccCCC
Q 029198 76 VYDINGREAD------------------------E---------------VEPILDALP--NLEQFIYCSSAGVYLKSDL 114 (197)
Q Consensus 76 vi~~a~~~~~------------------------~---------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~ 114 (197)
+||+++.... . .+.+++.++ +..+||++||...+...
T Consensus 91 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-- 168 (278)
T PRK08277 91 LINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPL-- 168 (278)
T ss_pred EEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCC--
Confidence 9999984211 0 122344444 45789999997765321
Q ss_pred CCCCCCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 115 LPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 115 ~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+...| .+|...+.+.+ ..++++..++||++..+.
T Consensus 169 ---------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~ 211 (278)
T PRK08277 169 ---------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ 211 (278)
T ss_pred ---------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence 122346 88998887753 258999999999998874
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.4e-13 Score=101.32 Aligned_cols=143 Identities=17% Similarity=0.171 Sum_probs=96.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|+++.+..+...... ..++.+...++.++.+|+.|++++.++++. ..+|+
T Consensus 12 tG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 87 (247)
T PRK12935 12 TGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENL----VNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDI 87 (247)
T ss_pred ECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHH----HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999987765432211110 011112224688999999999999888774 25899
Q ss_pred EEeccCCCccc--------------------hHHH----HHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE--------------------VEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~--------------------~~~l----l~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++..... ...+ +..+. +..++|++||...+... .+...|
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y 156 (247)
T PRK12935 88 LVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG-----------FGQTNY 156 (247)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC-----------CCCcch
Confidence 99999873211 1222 33332 34689999995443211 123456
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++++++++||++.++.
T Consensus 157 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~ 193 (247)
T PRK12935 157 SAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEM 193 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChh
Confidence 88888776542 358999999999998763
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.8e-13 Score=102.40 Aligned_cols=142 Identities=17% Similarity=0.163 Sum_probs=100.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+.....++.++.+|+.+.+++.++++.. ++|+
T Consensus 13 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~ 87 (253)
T PRK06172 13 TGGAAGIGRATALAFAREGAKVVVADRDAAGGEETV-----ALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDY 87 (253)
T ss_pred eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999865422111 111222346889999999999888877632 6899
Q ss_pred EEeccCCCccc-------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE-------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~-------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+++..... .+.++..+. +..+++++||...+.... ....
T Consensus 88 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-----------~~~~ 156 (253)
T PRK06172 88 AFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAP-----------KMSI 156 (253)
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----------CCch
Confidence 99999863110 122333333 456899999977654221 1234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..++++..+.||.+-.+.
T Consensus 157 Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~ 194 (253)
T PRK06172 157 YAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDM 194 (253)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence 6 88988887653 257999999999987663
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.6e-13 Score=101.77 Aligned_cols=132 Identities=25% Similarity=0.315 Sum_probs=101.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||++|++++++|+++|++|.+++|+++...... .++.+..+|+.++..+...++ +.|.++++.
T Consensus 6 ~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------------~~v~~~~~d~~~~~~l~~a~~--G~~~~~~i~ 71 (275)
T COG0702 6 TGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------------GGVEVVLGDLRDPKSLVAGAK--GVDGVLLIS 71 (275)
T ss_pred EecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------------CCcEEEEeccCCHhHHHHHhc--cccEEEEEe
Confidence 699999999999999999999999999988743221 579999999999999999999 999999887
Q ss_pred CCCc-------cchHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCCCCCcchhhhhHHHHHhhcCCcEEEE
Q 029198 81 GREA-------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL 149 (197)
Q Consensus 81 ~~~~-------~~~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~i~ 149 (197)
+... .....+++..+ +.++++++|....-. ..+..+..+|..+|..+.+.+++++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~e~~l~~sg~~~t~l 139 (275)
T COG0702 72 GLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADA------------ASPSALARAKAAVEAALRSSGIPYTTL 139 (275)
T ss_pred cccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCC------------CCccHHHHHHHHHHHHHHhcCCCeEEE
Confidence 6432 12233343333 577888888655421 112223388999999999999999999
Q ss_pred ccceeeCCC
Q 029198 150 RPVYIYGPL 158 (197)
Q Consensus 150 r~~~i~g~~ 158 (197)
|+..+|...
T Consensus 140 r~~~~~~~~ 148 (275)
T COG0702 140 RRAAFYLGA 148 (275)
T ss_pred ecCeeeecc
Confidence 977777663
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.9e-13 Score=98.61 Aligned_cols=141 Identities=21% Similarity=0.242 Sum_probs=96.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
||++|++|++++++|+++|++|++++|+..+....+ ...+.....++.++.+|+.|++++.++++. ..+|+
T Consensus 4 tG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (239)
T TIGR01830 4 TGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEV----VEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI 79 (239)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 699999999999999999999999999763211111 011122234588999999999998887763 26899
Q ss_pred EEeccCCCcc--------------------chHHHHHhCC------CCCcEEEEecce-ecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------EVEPILDALP------NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~~~------~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+++.... +...+++++. +..+++++||.. .++... ...
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~------------~~~ 147 (239)
T TIGR01830 80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG------------QAN 147 (239)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC------------Cch
Confidence 9999987421 1222333332 356899999964 554321 223
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+++ ..++.+++++||.+.++
T Consensus 148 y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~ 184 (239)
T TIGR01830 148 YAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTD 184 (239)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCCh
Confidence 5 77877666542 36899999999988765
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.4e-13 Score=101.12 Aligned_cols=137 Identities=20% Similarity=0.195 Sum_probs=94.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++........ + -...++.+|+.|++++.++++.. ++|+
T Consensus 13 tGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~--------~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 13 TGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAAD--------E--VGGLFVPTDVTDEDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--------H--cCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999997654211100 0 12267889999999998887642 6899
Q ss_pred EEeccCCCcc---c-----------------------hHHHHHhCC--CCCcEEEEecc-eecccCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD---E-----------------------VEPILDALP--NLEQFIYCSSA-GVYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 76 vi~~a~~~~~---~-----------------------~~~ll~~~~--~~~~~v~~Ss~-~vyg~~~~~~~~e~~~~~~~ 126 (197)
|||+++.... . ++.++..++ +..++|++||. ++++... +.
T Consensus 83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~-----------~~ 151 (255)
T PRK06057 83 AFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSAT-----------SQ 151 (255)
T ss_pred EEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCC-----------CC
Confidence 9999986311 0 122334443 45689999885 3554311 12
Q ss_pred Ccc-hhhhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 127 SRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 127 ~~~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
..| .+|...+.+. ...++++++++||++.++.
T Consensus 152 ~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~ 191 (255)
T PRK06057 152 ISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPL 191 (255)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCch
Confidence 235 7887665543 2358999999999998874
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.7e-13 Score=101.49 Aligned_cols=141 Identities=16% Similarity=0.179 Sum_probs=100.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|.+|.+++++|++.|++|++++|++++..... ..+.....++.++.+|+.|.+++.++++. .++|+
T Consensus 16 tGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 90 (265)
T PRK07097 16 TGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGL-----AAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDI 90 (265)
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 799999999999999999999999988765432111 11112234688999999999999888764 25899
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecce-ecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||++|..... .+.++..++ +..+||++||.. .++. .+...
T Consensus 91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~ 158 (265)
T PRK07097 91 LVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR------------ETVSA 158 (265)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCC------------CCCcc
Confidence 99999874211 223444444 457899999854 3321 12234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++.++||++..+.
T Consensus 159 Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~ 196 (265)
T PRK07097 159 YAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQ 196 (265)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccc
Confidence 6 88888877653 358999999999998874
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.3e-13 Score=99.55 Aligned_cols=143 Identities=21% Similarity=0.276 Sum_probs=95.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|+++.|.......... .+......++.++.+|+.|++++.++++. ..+|+
T Consensus 6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (242)
T TIGR01829 6 TGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWL----QEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDV 81 (242)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Confidence 7999999999999999999999999983222110000 01111124688999999999988877653 25899
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++.... + ++.++..++ +..+++++||....... .....|
T Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y 150 (242)
T TIGR01829 82 LVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ-----------FGQTNY 150 (242)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----------CCcchh
Confidence 9999986321 0 222445554 55789999985432111 012235
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+++ ..+++++.++||++.++.
T Consensus 151 ~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~ 187 (242)
T TIGR01829 151 SAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDM 187 (242)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcc
Confidence 77876665542 358999999999998874
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.7e-13 Score=100.92 Aligned_cols=141 Identities=17% Similarity=0.150 Sum_probs=96.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEE-ecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|++|.++++.|++.|++|+++ +|+++...... ..+.....++.++.+|+.|++++.++++.. ++|
T Consensus 11 ~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (247)
T PRK05565 11 TGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELL-----EEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKID 85 (247)
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 6999999999999999999999999 88755421110 011112346889999999999988877632 799
Q ss_pred EEEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+|||+++.... + .+.++..+. +..++|++||...+.... ....
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~-----------~~~~ 154 (247)
T PRK05565 86 ILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS-----------CEVL 154 (247)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC-----------CccH
Confidence 99999986421 1 122233333 456799999966432211 1223
Q ss_pred c-hhhhhHHHHH-------hhcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.++ ...+++++.++||++-.+
T Consensus 155 y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~ 191 (247)
T PRK05565 155 YSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTE 191 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCc
Confidence 5 7777766554 246899999999998665
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.8e-13 Score=102.53 Aligned_cols=140 Identities=19% Similarity=0.148 Sum_probs=98.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.++++.|+++|++|++++|+ +...... .++.+...++.++.+|+.+++++.++++. -++|+
T Consensus 12 tGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 85 (272)
T PRK08589 12 TGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETV-----DKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDV 85 (272)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHH-----HHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCE
Confidence 7999999999999999999999999998 3322111 11122234688999999999988877653 25899
Q ss_pred EEeccCCCcc--c-----------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--E-----------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--~-----------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||.... . ++.++..++ ...++|++||...+.... ....|
T Consensus 86 li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y 154 (272)
T PRK08589 86 LFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADL-----------YRSGY 154 (272)
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCC-----------CCchH
Confidence 9999986421 0 122344444 336899999976542211 12346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..+++++.+.||.+..+
T Consensus 155 ~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~ 190 (272)
T PRK08589 155 NAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETP 190 (272)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCc
Confidence 88988887753 35899999999998766
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.6e-13 Score=102.23 Aligned_cols=141 Identities=13% Similarity=0.238 Sum_probs=100.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhc----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSA----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~----~~~d~ 75 (197)
|||+|.+|.+++++|+++|++|++++|++++..... .++.. ...++.++.+|+.|++++.++++. -++|+
T Consensus 14 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~ 88 (263)
T PRK08339 14 TASSKGIGFGVARVLARAGADVILLSRNEENLKKAR-----EKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPDI 88 (263)
T ss_pred eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCcE
Confidence 799999999999999999999999999865422110 01111 124688999999999998888763 25999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||++|..... ++.+++.++ +..++|++||...+.... ....|
T Consensus 89 lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~-----------~~~~y 157 (263)
T PRK08339 89 FFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIP-----------NIALS 157 (263)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCC-----------cchhh
Confidence 99999863211 344566665 457899999976532111 12235
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..|+++..+.||++-.+
T Consensus 158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (263)
T PRK08339 158 NVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTD 193 (263)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccH
Confidence 77888776543 36899999999999765
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.3e-12 Score=94.89 Aligned_cols=140 Identities=19% Similarity=0.197 Sum_probs=96.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc---cCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~---~~~d~vi 77 (197)
|||+|++|++++++|+++|++|++++|+++.... + . ...++.++.+|+.|++++.++++. .++|+||
T Consensus 7 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~--------~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi 76 (225)
T PRK08177 7 IGASRGLGLGLVDRLLERGWQVTATVRGPQQDTA-L--------Q-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF 76 (225)
T ss_pred eCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHH-H--------H-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence 7999999999999999999999999998765321 1 0 123577888999999988877763 3699999
Q ss_pred eccCCCcc----------------------c----hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 78 DINGREAD----------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 78 ~~a~~~~~----------------------~----~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
|++|.... + .+.++..++ +...++++||. ++..... +..+...|
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~--~g~~~~~------~~~~~~~Y~ 148 (225)
T PRK08177 77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ--LGSVELP------DGGEMPLYK 148 (225)
T ss_pred EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC--ccccccC------CCCCccchH
Confidence 99976311 1 122333334 33577888774 2221110 01122246
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++.++.++||++-.+.
T Consensus 149 ~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 149 ASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred HHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 88999888764 357899999999997764
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.7e-13 Score=99.56 Aligned_cols=143 Identities=14% Similarity=0.068 Sum_probs=96.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|++++++|+++|++|++..|+........ ...+.+...++.++.+|+.+++++.++++. .++|+
T Consensus 12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 87 (252)
T PRK06077 12 TGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNET----LKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADI 87 (252)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHH----HHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999988776532211000 001112224577889999999988877653 26899
Q ss_pred EEeccCCCccc------------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
|||++|..... ++.+++.++...+||++||...+.. ..+...| .
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~ 156 (252)
T PRK06077 88 LVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP-----------AYGLSIYGA 156 (252)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC-----------CCCchHHHH
Confidence 99999862110 1222333333358999999776532 1233456 8
Q ss_pred hhhhHHHHHhh------cCCcEEEEccceeeCCC
Q 029198 131 GKLNTESVLES------KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 131 ~k~~~e~~~~~------~~~~~~i~r~~~i~g~~ 158 (197)
+|...+.+.+. .++.+.+++||++.++.
T Consensus 157 sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~ 190 (252)
T PRK06077 157 MKAAVINLTKYLALELAPKIRVNAIAPGFVKTKL 190 (252)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChH
Confidence 89888876532 27899999999998763
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.1e-12 Score=98.12 Aligned_cols=134 Identities=18% Similarity=0.112 Sum_probs=95.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++.. . ...++.++.+|+.+++++.++++.. ++|+
T Consensus 12 tGas~gIG~~la~~l~~~g~~v~~~~r~~~~~--~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 12 TGGTRGIGAGIARAFLAAGATVVVCGRRAPET--V-----------DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCChhhh--h-----------cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986541 0 0246888999999999888877632 6899
Q ss_pred EEeccCCCcc--------------------chHHHHHh----CC---CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~----~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||++|.... +...++++ +. +..++|++||...+... .....
T Consensus 79 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------~~~~~ 147 (252)
T PRK07856 79 LVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS-----------PGTAA 147 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC-----------CCCch
Confidence 9999985321 11122222 22 23689999997654211 11234
Q ss_pred c-hhhhhHHHHHhh------cCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLES------KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~~------~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+. ..+.++.++||.+..+.
T Consensus 148 Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~ 184 (252)
T PRK07856 148 YGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQ 184 (252)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChH
Confidence 6 889998887642 23899999999997763
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.6e-13 Score=100.37 Aligned_cols=142 Identities=15% Similarity=0.185 Sum_probs=99.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|++++++|+++|++|++++|+++...... .++.....++.++.+|+.+++++.++++.. ++|+
T Consensus 17 tGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 91 (256)
T PRK06124 17 TGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAV-----AALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDI 91 (256)
T ss_pred ECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 699999999999999999999999999865422111 111222346889999999999888877532 5799
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++..... .+.+++.+. +..++|++||...+.... ....|
T Consensus 92 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-----------~~~~Y 160 (256)
T PRK06124 92 LVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARA-----------GDAVY 160 (256)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCC-----------CccHh
Confidence 99999863211 222334443 557899999865432111 12345
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||.+.++.
T Consensus 161 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 197 (256)
T PRK06124 161 PAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATET 197 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcc
Confidence 77888776543 358999999999999874
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3e-13 Score=101.41 Aligned_cols=139 Identities=14% Similarity=0.112 Sum_probs=96.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++....... .+ ...++.++.+|+.|.+++..+++.. ++|+
T Consensus 8 tGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~-----~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 8 TGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFAD-----AL--GDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----Hh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999997654221110 00 1235889999999999998777632 5899
Q ss_pred EEeccCCCcc--------------------chHHHH----HhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------EVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll----~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++.... +...++ ..+. +..+++++||...+... ....|
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~y 148 (257)
T PRK07074 81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL------------GHPAY 148 (257)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC------------CCccc
Confidence 9999986421 111222 3323 45689999985432110 01245
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+++ ..+++++.++||+++++.
T Consensus 149 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~ 185 (257)
T PRK07074 149 SAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQA 185 (257)
T ss_pred HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcch
Confidence 78888877653 247999999999999874
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.8e-13 Score=100.46 Aligned_cols=143 Identities=17% Similarity=0.190 Sum_probs=98.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+|++|.++++.|+++|++|++++|+..+....+. ..+... ...+..+.+|+.|.+++.++++. .++
T Consensus 5 tG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 5 TGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFA----AEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 7999999999999999999999999997332111110 011111 12345678999999998877753 268
Q ss_pred cEEEeccCCCcc------------------------chHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~------------------------~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|+|||+++.... .++.+++.++ +.++|+++||...+.... ...
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~-----------~~~ 149 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP-----------DYT 149 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC-----------CCc
Confidence 999999986421 2345666666 567999999977654321 122
Q ss_pred cc-hhhhhHHHHHhh-------c--CCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLES-------K--GVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~~-------~--~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+. . +++++.++||++.++.
T Consensus 150 ~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~ 190 (251)
T PRK07069 150 AYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGI 190 (251)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcc
Confidence 35 888887776532 2 4889999999998874
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.2e-13 Score=100.35 Aligned_cols=141 Identities=13% Similarity=0.087 Sum_probs=99.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|++.|++|++++|+.+...... .++.+....+.++.+|+.+.+++.++++.. ++|+
T Consensus 14 tGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 88 (252)
T PRK07035 14 TGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVA-----DAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDI 88 (252)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999765422111 111222345788999999999888776532 5899
Q ss_pred EEeccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+++.... + ++.+++.++ +..+++++||...+.. ..+...
T Consensus 89 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~ 157 (252)
T PRK07035 89 LVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP-----------GDFQGI 157 (252)
T ss_pred EEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC-----------CCCCcc
Confidence 9999985210 1 223344444 4578999998543221 112345
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|..++.+++ ..|++++.+.||.+-.+
T Consensus 158 Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~ 194 (252)
T PRK07035 158 YSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTK 194 (252)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCc
Confidence 6 89999988764 35899999999998765
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.3e-13 Score=99.45 Aligned_cols=142 Identities=17% Similarity=0.228 Sum_probs=95.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecC-CCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc---------
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------- 70 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~--------- 70 (197)
|||+|++|.+++++|++.|++|++..+. ++...... .++......+..+.+|+.+.+++..+++.
T Consensus 10 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK12747 10 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETV-----YEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRT 84 (252)
T ss_pred eCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-----HHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhc
Confidence 7999999999999999999999887643 23211110 11112234567888999998777655431
Q ss_pred --cCccEEEeccCCCccc------------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 71 --KGFDVVYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 71 --~~~d~vi~~a~~~~~~------------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
.++|++||+||..... ++.+++.++...+||++||...+... .
T Consensus 85 g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 153 (252)
T PRK12747 85 GSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL-----------P 153 (252)
T ss_pred CCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC-----------C
Confidence 1699999999863211 12233344433699999997654321 1
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
....| .+|...+.+.+ ..+++++.+.||++.++.
T Consensus 154 ~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~ 195 (252)
T PRK12747 154 DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM 195 (252)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence 12346 89999887653 358999999999998874
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.6e-13 Score=99.75 Aligned_cols=140 Identities=21% Similarity=0.240 Sum_probs=97.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|++.|++|+++.|+++...... ..+.....++.++.+|+.|++++.++++.. .+|+
T Consensus 6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 6 TGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETA-----KEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999999999999754321111 111222346889999999999988876532 6899
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEeccee-cccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~ 127 (197)
|||+++....+ ++.++..++ + ..+++++||... ++.+ ...
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~ 148 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP------------ILS 148 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC------------CCc
Confidence 99999863211 122334443 2 368999998553 3321 133
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.| .+|...+.+.+ ..++.+++++||.+..+
T Consensus 149 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~ 186 (254)
T TIGR02415 149 AYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTP 186 (254)
T ss_pred chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCh
Confidence 46 88888887653 24799999999998766
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.3e-13 Score=100.53 Aligned_cols=141 Identities=13% Similarity=0.083 Sum_probs=97.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++++..... ..+.....++.++.+|+.+++++.++++.. ++|+
T Consensus 16 tGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 90 (263)
T PRK07814 16 TGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVA-----EQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDI 90 (263)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865422110 111122346888999999999988777632 7899
Q ss_pred EEeccCCCcc--------------------chHHHHHhCC-------CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------EVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~~~-------~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+|+.... +..++.+++. +..++|++||...... ..+...
T Consensus 91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~ 159 (263)
T PRK07814 91 VVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA-----------GRGFAA 159 (263)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC-----------CCCCch
Confidence 9999985311 1223333331 3468999998543211 112334
Q ss_pred c-hhhhhHHHHHhh------cCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLES------KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~~------~~~~~~i~r~~~i~g~ 157 (197)
| .+|..++.+.+. .+++++.++||++..+
T Consensus 160 Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~ 195 (263)
T PRK07814 160 YGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTS 195 (263)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCc
Confidence 6 899998877642 3578999999998765
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=4e-13 Score=113.35 Aligned_cols=142 Identities=18% Similarity=0.234 Sum_probs=103.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... .++.....++.++.+|+.|.+++.++++.. ++|+
T Consensus 377 tGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 451 (657)
T PRK07201 377 TGASSGIGRATAIKVAEAGATVFLVARNGEALDELV-----AEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDY 451 (657)
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999865432111 111122346889999999999998887632 6999
Q ss_pred EEeccCCCcc-----------c---------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD-----------E---------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~-----------~---------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+||+||.... . ++.++..++ +..+||++||...+.... ...
T Consensus 452 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~ 520 (657)
T PRK07201 452 LVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP-----------RFS 520 (657)
T ss_pred EEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-----------Ccc
Confidence 9999986311 0 122344454 557999999987764321 123
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..++++++++||++..+.
T Consensus 521 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~ 559 (657)
T PRK07201 521 AYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPM 559 (657)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccc
Confidence 46 88999887653 358999999999998764
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.5e-13 Score=100.33 Aligned_cols=141 Identities=15% Similarity=0.177 Sum_probs=96.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+... .... ..+.....++.++.+|+.+++++.++++.. .+|+
T Consensus 12 tG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~ 85 (263)
T PRK08226 12 TGALQGIGEGIARVFARHGANLILLDISPEI-EKLA-----DELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI 85 (263)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHH-----HHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999997532 1110 111112346788999999999988887642 6899
Q ss_pred EEeccCCCcc--------------------chH----HHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------EVE----PILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~----~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+++.... +.. .++..+. +..++|++||...... .......|
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------~~~~~~~Y 155 (263)
T PRK08226 86 LVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV----------ADPGETAY 155 (263)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc----------CCCCcchH
Confidence 9999986321 111 2233333 4468999998543100 00112345
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..+++++.++||.+.++
T Consensus 156 ~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~ 191 (263)
T PRK08226 156 ALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTP 191 (263)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCH
Confidence 88888887653 24799999999999886
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.4e-13 Score=99.34 Aligned_cols=143 Identities=15% Similarity=0.093 Sum_probs=96.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|+||.+++++|+++|++|+++.++......... ..+.....++.++.+|+.+++++.++++. -.+|+
T Consensus 8 tGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 83 (256)
T PRK12743 8 TASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETA----EEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDV 83 (256)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999998775443211110 11122235689999999999988877653 26899
Q ss_pred EEeccCCCccc--------------------hHHH----HHhCC---CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE--------------------VEPI----LDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~--------------------~~~l----l~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+++..... ...+ .+.+. ...++|++||..... +..+...
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~-----------~~~~~~~ 152 (256)
T PRK12743 84 LVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT-----------PLPGASA 152 (256)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC-----------CCCCcch
Confidence 99999863211 1122 23332 135899999854321 1122334
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+++ ..+++++.++||.+.++.
T Consensus 153 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~ 190 (256)
T PRK12743 153 YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPM 190 (256)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcc
Confidence 6 88888877653 357999999999999874
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.4e-12 Score=97.61 Aligned_cols=138 Identities=15% Similarity=0.185 Sum_probs=96.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++... ... .. ....+..+.+|+.+++++.++++.. ++|+
T Consensus 21 tGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~-~~~-----~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 21 TGGASGIGHAIAELFAAKGARVALLDRSEDVAE-VAA-----QL--LGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH-----Hh--hCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 699999999999999999999999999764311 000 00 0235678999999999888877632 6899
Q ss_pred EEeccCCCcc--------------------chHHHH----HhCC--CCCcEEEEeccee-cccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------EVEPIL----DALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll----~~~~--~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~~ 128 (197)
|||++|.... +...++ ..++ +..+||++||... ++.. ....
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~ 160 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE------------RHVA 160 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC------------CCch
Confidence 9999986421 112223 3333 4568999999653 3211 1224
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++.++||++..+.
T Consensus 161 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 198 (255)
T PRK06841 161 YCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTEL 198 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcc
Confidence 5 88888776643 358999999999998763
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=9.3e-13 Score=98.66 Aligned_cols=135 Identities=16% Similarity=0.122 Sum_probs=96.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc------cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~------~~~d 74 (197)
|||+|++|.++++.|+++|++|++++|+.++... + . ..++..+.+|+.|.+++.++++. ..+|
T Consensus 8 tGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~-~--------~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 8 TGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR-M--------N--SLGFTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH-H--------H--hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 7999999999999999999999999998654211 1 1 12477889999999887766542 2579
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
.++|++|..... .+.+++.++ +.+++|++||...+... .....
T Consensus 77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~ 145 (256)
T PRK08017 77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIST-----------PGRGA 145 (256)
T ss_pred EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCC-----------CCccH
Confidence 999999863211 123456665 56789999986432111 12334
Q ss_pred c-hhhhhHHHHH-------hhcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...|.+. ...++++++++||.+..+
T Consensus 146 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~ 182 (256)
T PRK08017 146 YAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTR 182 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccc
Confidence 6 8898888754 346899999999987654
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-12 Score=98.09 Aligned_cols=142 Identities=11% Similarity=0.074 Sum_probs=97.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+.+...... ..+.....++.++.+|+.|.+++.++++. .++|+
T Consensus 17 tG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~ 91 (255)
T PRK06113 17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHVV-----DEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDI 91 (255)
T ss_pred ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999998765422110 11111234678899999999998877653 26899
Q ss_pred EEeccCCCcc-------------------chHHHHHhC----C--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREAD-------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~-------------------~~~~ll~~~----~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
+||+++.... +..++++++ . +..++|++||...... ..+...|
T Consensus 92 li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y~ 160 (255)
T PRK06113 92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----------NINMTSYA 160 (255)
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC-----------CCCcchhH
Confidence 9999986321 122233332 2 3458999999654211 1122346
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|.+.+.+++ ..+++++++.||.+-.+.
T Consensus 161 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~ 196 (255)
T PRK06113 161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA 196 (255)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccc
Confidence 88999888763 357999999999987764
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=9.8e-13 Score=98.45 Aligned_cols=139 Identities=14% Similarity=0.127 Sum_probs=98.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||++.||.+++++|+++|++|++++|+..... ...+.+...++.++.+|+.|++++.++++. -++|+
T Consensus 14 tGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 14 TGCNTGLGQGMAIGLAKAGADIVGVGVAEAPET-------QAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEecCchHHHH-------HHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999988643210 011122235688999999999999888764 26999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||..... ++.++..+. + ..++|++||...+.... ....
T Consensus 87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~~~ 155 (251)
T PRK12481 87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI-----------RVPS 155 (251)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC-----------CCcc
Confidence 99999863211 222333343 2 36899999976553211 1124
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..|+++..++||++-.+
T Consensus 156 Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~ 192 (251)
T PRK12481 156 YTASKSAVMGLTRALATELSQYNINVNAIAPGYMATD 192 (251)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccC
Confidence 6 88998887653 46899999999999766
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.2e-12 Score=97.30 Aligned_cols=130 Identities=14% Similarity=0.105 Sum_probs=94.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++.... ..++.++.+|+.|++++.++++. ..+|+
T Consensus 15 tG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 80 (266)
T PRK06171 15 TGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG 80 (266)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865521 13578899999999998887764 26899
Q ss_pred EEeccCCCcc-----------------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCC
Q 029198 76 VYDINGREAD-----------------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCET 120 (197)
Q Consensus 76 vi~~a~~~~~-----------------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~ 120 (197)
|||+||.... + .+.++..++ +..++|++||...+....
T Consensus 81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 153 (266)
T PRK06171 81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE------- 153 (266)
T ss_pred EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC-------
Confidence 9999985311 0 112223333 345799999976542111
Q ss_pred CCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceee
Q 029198 121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIY 155 (197)
Q Consensus 121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~ 155 (197)
....| .+|...+.+.+ ..+++++.++||.+-
T Consensus 154 ----~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 154 ----GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 12346 88888887653 358999999999885
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=9.6e-13 Score=98.28 Aligned_cols=141 Identities=13% Similarity=0.172 Sum_probs=97.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.++++.|+++|++|++++|++++..... .++.+...++.++.+|+.+++++.++++. ..+|+
T Consensus 11 tG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (253)
T PRK08217 11 TGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAV-----AECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNG 85 (253)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999999999999865422111 11112234688899999999888777664 25899
Q ss_pred EEeccCCCccc---------------------------------hHHHHHhCC---CCCcEEEEecceecccCCCCCCCC
Q 029198 76 VYDINGREADE---------------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCE 119 (197)
Q Consensus 76 vi~~a~~~~~~---------------------------------~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e 119 (197)
|||++|..... .+.++..+. ....++++||...++..
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~------- 158 (253)
T PRK08217 86 LINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM------- 158 (253)
T ss_pred EEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC-------
Confidence 99999852110 112222332 22468999987666432
Q ss_pred CCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 120 TDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 120 ~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+...| .+|...+.+++ ..+++++.++||++.++.
T Consensus 159 -----~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~ 200 (253)
T PRK08217 159 -----GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEM 200 (253)
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence 22346 88988877643 358999999999998874
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.6e-13 Score=103.09 Aligned_cols=142 Identities=18% Similarity=0.219 Sum_probs=99.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|.||.+++++|+++|++|++++|+++...... .++.+...++.++.+|+.|.++++++++. -++|+
T Consensus 13 TGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 87 (330)
T PRK06139 13 TGASSGIGQATAEAFARRGARLVLAARDEEALQAVA-----EECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDV 87 (330)
T ss_pred cCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999865532111 11222235678889999999999887753 26899
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||....+ ++.++..++ +..++|++||...+.... ....|
T Consensus 88 lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p-----------~~~~Y 156 (330)
T PRK06139 88 WVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQP-----------YAAAY 156 (330)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCC-----------CchhH
Confidence 99999863211 223344444 446899999876542211 12346
Q ss_pred -hhhhhHHHHHh-------h-cCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~-~~~~~~i~r~~~i~g~~ 158 (197)
.+|.....+.+ . .++.++.+.||.+.++.
T Consensus 157 ~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~ 194 (330)
T PRK06139 157 SASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPG 194 (330)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcc
Confidence 88887655432 2 37999999999998874
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.7e-13 Score=99.35 Aligned_cols=142 Identities=13% Similarity=0.136 Sum_probs=99.6
Q ss_pred CCcccchHHHHHHHHHHCCCe-EEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|.+|..++++|++.|++ |++++|+.++..... ..+......+.++.+|+.+++++.++++.. ++|
T Consensus 12 tGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 86 (260)
T PRK06198 12 TGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQA-----AELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLD 86 (260)
T ss_pred eCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 799999999999999999998 999999755422110 111222346788999999999988877642 689
Q ss_pred EEEeccCCCcc--------------------chHHHH----HhCC---CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREAD--------------------EVEPIL----DALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~~~~ll----~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+|||+++.... +..+++ +.+. ...++|++||...++... ...
T Consensus 87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~-----------~~~ 155 (260)
T PRK06198 87 ALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP-----------FLA 155 (260)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC-----------Ccc
Confidence 99999986321 112222 3332 135799999977664321 123
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...|.+.+ ..+++++.++||+++++.
T Consensus 156 ~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~ 194 (260)
T PRK06198 156 AYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEG 194 (260)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcc
Confidence 46 88998887754 246899999999999874
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-12 Score=97.85 Aligned_cols=143 Identities=17% Similarity=0.132 Sum_probs=93.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|..+++.|+++|++|+++.++........ ...+.....++.++.+|+.+++++.++++. ..+|+
T Consensus 8 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 83 (248)
T PRK06947 8 TGASRGIGRATAVLAAARGWSVGINYARDAAAAEET----ADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDA 83 (248)
T ss_pred eCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999987765432211110 011122234688999999999988877653 26999
Q ss_pred EEeccCCCcc---------------------chHHH----HHhCC-C----CCcEEEEeccee-cccCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD---------------------EVEPI----LDALP-N----LEQFIYCSSAGV-YLKSDLLPHCETDTVD 124 (197)
Q Consensus 76 vi~~a~~~~~---------------------~~~~l----l~~~~-~----~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~ 124 (197)
|||++|.... +...+ +..+. . ..++|++||... ++...
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~----------- 152 (248)
T PRK06947 84 LVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN----------- 152 (248)
T ss_pred EEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC-----------
Confidence 9999985321 01112 22222 1 235999998653 33211
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
....| .+|...+.+.+ ..++++++++||++..+.
T Consensus 153 ~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~ 194 (248)
T PRK06947 153 EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEI 194 (248)
T ss_pred CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccc
Confidence 11235 88988886542 358999999999998874
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.8e-13 Score=99.65 Aligned_cols=142 Identities=18% Similarity=0.200 Sum_probs=98.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+|++|.+++++|+++|++|++++|++++..... .++.+. ..++..+.+|+.|.+++.++++. -.+
T Consensus 14 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 88 (265)
T PRK07062 14 TGGSSGIGLATVELLLEAGASVAICGRDEERLASAE-----ARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGV 88 (265)
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 799999999999999999999999999865532111 111111 13578899999999988877653 268
Q ss_pred cEEEeccCCCcc------------------------chHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~------------------------~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|++||+||.... .++.++..++ +..++|++||...+.... ...
T Consensus 89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~ 157 (265)
T PRK07062 89 DMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEP-----------HMV 157 (265)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCC-----------Cch
Confidence 999999986321 1334455555 457999999966532111 112
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..|++++.++||++-.+.
T Consensus 158 ~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 196 (265)
T PRK07062 158 ATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQ 196 (265)
T ss_pred HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccch
Confidence 35 67777665542 368999999999997763
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-12 Score=99.70 Aligned_cols=139 Identities=14% Similarity=0.079 Sum_probs=96.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++...... ..+ ....++.++.+|+.|++++.++++. -++|+
T Consensus 24 tGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~ 97 (280)
T PLN02253 24 TGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVC-----DSL-GGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI 97 (280)
T ss_pred ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHh-cCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999998755422111 001 1124688999999999998887763 26999
Q ss_pred EEeccCCCcc----------------------chHHH----HHhCC--CCCcEEEEeccee-cccCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD----------------------EVEPI----LDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 76 vi~~a~~~~~----------------------~~~~l----l~~~~--~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~ 126 (197)
|||+||.... +...+ +..+. +..+++++||... ++.. ..
T Consensus 98 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------------~~ 165 (280)
T PLN02253 98 MVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL------------GP 165 (280)
T ss_pred EEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC------------CC
Confidence 9999986311 01122 22222 3357899888543 3221 11
Q ss_pred Ccc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
..| .+|...+.+.+ ..++++..++||++.++
T Consensus 166 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~ 204 (280)
T PLN02253 166 HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTA 204 (280)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence 246 89999888763 24899999999999775
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.5e-12 Score=97.33 Aligned_cols=139 Identities=16% Similarity=0.210 Sum_probs=95.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc------Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~------~~d 74 (197)
|||+|++|.++++.|++.|++|++..++.......+ ......++.++.+|+.|++++.++++.. .+|
T Consensus 11 tGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 11 TGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEAL-------ADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred eCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHH-------HHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 799999999999999999999998766433211110 0111246888999999999988887632 299
Q ss_pred EEEeccCCCc--------------------------cc----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCC
Q 029198 75 VVYDINGREA--------------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT 122 (197)
Q Consensus 75 ~vi~~a~~~~--------------------------~~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 122 (197)
++||+++... .+ ++.++..+. +..+++++||..... +
T Consensus 84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~ 152 (253)
T PRK08642 84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN-----------P 152 (253)
T ss_pred EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC-----------C
Confidence 9999997420 01 222333333 456899999853321 1
Q ss_pred CCCCCcc-hhhhhHHHHHhh-------cCCcEEEEccceeeCC
Q 029198 123 VDPKSRH-KGKLNTESVLES-------KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 123 ~~~~~~~-~~k~~~e~~~~~-------~~~~~~i~r~~~i~g~ 157 (197)
..+...| .+|...+.+++. .+++++.++||++-.+
T Consensus 153 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~ 195 (253)
T PRK08642 153 VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTT 195 (253)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCc
Confidence 1233457 899999887642 5799999999998765
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.5e-12 Score=96.23 Aligned_cols=141 Identities=13% Similarity=0.161 Sum_probs=95.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|.+|.++++.|+++|++|++++|+........ ..+......+.++.+|+.|++++.++++.. .+|+
T Consensus 7 tG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (252)
T PRK07677 7 TGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAK-----LEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA 81 (252)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 799999999999999999999999999865422110 111112246889999999999998877542 6899
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||++|.... + ++.+++.+. + ..+++++||...+.... ....
T Consensus 82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~~~ 150 (252)
T PRK07677 82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGP-----------GVIH 150 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCC-----------CCcc
Confidence 9999975211 0 122233322 2 36899999864321110 1123
Q ss_pred c-hhhhhHHHHHh--------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE--------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~--------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ .+|++++.++||.+.++
T Consensus 151 Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~ 188 (252)
T PRK07677 151 SAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT 188 (252)
T ss_pred hHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence 5 78888776643 25899999999999853
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.6e-13 Score=110.34 Aligned_cols=141 Identities=16% Similarity=0.102 Sum_probs=100.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+.++..... ..+.....++.++.+|+.|++++.++++.. .+|+
T Consensus 321 ~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 395 (582)
T PRK05855 321 TGAGSGIGRETALAFAREGAEVVASDIDEAAAERTA-----ELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDI 395 (582)
T ss_pred ECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 799999999999999999999999999865432110 111122346889999999999998887642 5899
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||....+ ++.++..++ + ..+||++||...|.... ....
T Consensus 396 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~~~~ 464 (582)
T PRK05855 396 VVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR-----------SLPA 464 (582)
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC-----------CCcH
Confidence 99999874211 122333333 2 35899999987764321 2234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..|++++.++||.+-.+
T Consensus 465 Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 501 (582)
T PRK05855 465 YATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN 501 (582)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence 6 89998877642 36899999999998654
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.3e-12 Score=96.78 Aligned_cols=139 Identities=19% Similarity=0.216 Sum_probs=94.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||+|.||.+++++|+++|++|+++.+......+.+ .. ..++.++.+|+.|.+++.++++.. ++|++||+
T Consensus 12 tGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l--------~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 82 (237)
T PRK12742 12 LGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERL--------AQ-ETGATAVQTDSADRDAVIDVVRKSGALDILVVN 82 (237)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHH--------HH-HhCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence 799999999999999999999998876433211111 00 113567889999999888877643 58999999
Q ss_pred cCCCccc--------------------h----HHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhh
Q 029198 80 NGREADE--------------------V----EPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN 134 (197)
Q Consensus 80 a~~~~~~--------------------~----~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~ 134 (197)
+|..... . +.++..++...++|++||..... .+..+...| .+|..
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~~~~Y~~sKaa 152 (237)
T PRK12742 83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR----------MPVAGMAAYAASKSA 152 (237)
T ss_pred CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc----------CCCCCCcchHHhHHH
Confidence 9864211 1 11222233346899999854311 011223456 89999
Q ss_pred HHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 135 TESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 135 ~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+.+.+ ..++++++++||.+..+.
T Consensus 153 ~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~ 183 (237)
T PRK12742 153 LQGMARGLARDFGPRGITINVVQPGPIDTDA 183 (237)
T ss_pred HHHHHHHHHHHHhhhCeEEEEEecCcccCCc
Confidence 887653 357999999999998764
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.1e-12 Score=96.80 Aligned_cols=140 Identities=14% Similarity=0.125 Sum_probs=97.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|.||.+++++|++.|++|+++++..... .. ..+......+..+.+|+.|.+++.+++++ .++|+
T Consensus 16 tG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~--~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~ 88 (253)
T PRK08993 16 TGCDTGLGQGMALGLAEAGCDIVGINIVEPTE--TI-----EQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI 88 (253)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEecCcchHH--HH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 79999999999999999999999987753221 00 11112234678899999999999888764 26999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||..... ++.++..+. + ..++|++||...+..... ...
T Consensus 89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------~~~ 157 (253)
T PRK08993 89 LVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR-----------VPS 157 (253)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC-----------Ccc
Confidence 99999863211 122333333 2 257999999766532211 124
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|.+.+.+.+ ..|++++.++||++-.+.
T Consensus 158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~ 195 (253)
T PRK08993 158 YTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNN 195 (253)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcc
Confidence 6 88988887653 358999999999997763
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2e-12 Score=97.99 Aligned_cols=144 Identities=17% Similarity=0.191 Sum_probs=95.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCC--CCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|++|.+++++|+++|++|++++|+.+........ ....++.....++.++.+|+.+++++.++++.. ++
T Consensus 12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 91 (273)
T PRK08278 12 TGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGI 91 (273)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 79999999999999999999999999986542211100 000112222346889999999999998887643 79
Q ss_pred cEEEeccCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~--------------------~~~~ll~~----~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|+|||++|.... +...++++ ++ +..+++++||...... ....+..
T Consensus 92 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------~~~~~~~ 162 (273)
T PRK08278 92 DICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP---------KWFAPHT 162 (273)
T ss_pred CEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc---------cccCCcc
Confidence 999999986321 12223333 33 2357888887432100 0012334
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccce
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVY 153 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~ 153 (197)
.| .+|...+.+.+ ..++.++.+.|+.
T Consensus 163 ~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~ 196 (273)
T PRK08278 163 AYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT 196 (273)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence 56 89999998763 3589999999994
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.1e-12 Score=98.85 Aligned_cols=140 Identities=18% Similarity=0.263 Sum_probs=96.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|.||.+++++|++.|++|++++|+++...... ..+.....++.++.+|+.+++++.++++.. .+|+
T Consensus 15 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~ 89 (264)
T PRK07576 15 VGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAV-----AQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDV 89 (264)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999999999999865422110 111222346788999999999998887642 5899
Q ss_pred EEeccCCCc--------------------cchHHHHHh----CC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREA--------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~--------------------~~~~~ll~~----~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
+||+++... .++.+++.+ ++ ...+++++||...+.. ......|
T Consensus 90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~-----------~~~~~~Y~ 158 (264)
T PRK07576 90 LVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP-----------MPMQAHVC 158 (264)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC-----------CCCccHHH
Confidence 999987421 112223332 22 2358999998654311 0112346
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYG 156 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g 156 (197)
.+|...+.+.+ ..+++++.++||.+.+
T Consensus 159 asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~ 192 (264)
T PRK07576 159 AAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAG 192 (264)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecccccC
Confidence 88988887754 2579999999999875
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-13 Score=108.84 Aligned_cols=156 Identities=19% Similarity=0.225 Sum_probs=106.6
Q ss_pred CCcccchHHHHHHHHHHCC---CeEEEEecCCCCccC--CC----CCCCchhhhh----ccCceEEEeecCCCH------
Q 029198 1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQ--QL----PGESDQEFAE----FSSKILHLKGDRKDY------ 61 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g---~~V~~~~r~~~~~~~--~~----~~~~~~~~~~----~~~~~~~~~~d~~~~------ 61 (197)
||||||+|.-++++|++.- .+++.+.|.+..... .+ ....-..+.+ ...++..+.||+.++
T Consensus 18 TG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~ 97 (467)
T KOG1221|consen 18 TGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDLGISE 97 (467)
T ss_pred EcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcccCCCh
Confidence 7999999999999999874 489999998765421 11 1111111111 236788999999874
Q ss_pred HHHHhhhhccCccEEEeccCC-------------CccchHHHHHhCC---CCCcEEEEecceecccC---CCCCCCCCCC
Q 029198 62 DFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKS---DLLPHCETDT 122 (197)
Q Consensus 62 ~~l~~~~~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~---~~~~~v~~Ss~~vyg~~---~~~~~~e~~~ 122 (197)
++++.+.+ ++|+|||+|+. +..+++++++.++ +.+.++++||..+.-.. ...++.+...
T Consensus 98 ~D~~~l~~--eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~ 175 (467)
T KOG1221|consen 98 SDLRTLAD--EVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPET 175 (467)
T ss_pred HHHHHHHh--cCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCcccc
Confidence 45554455 99999999986 3456889999988 78999999997664111 1111211110
Q ss_pred ---------------------------CCCCCcchhhhhHHHHHh--hcCCcEEEEccceeeCCC
Q 029198 123 ---------------------------VDPKSRHKGKLNTESVLE--SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 123 ---------------------------~~~~~~~~~k~~~e~~~~--~~~~~~~i~r~~~i~g~~ 158 (197)
.-|.+++-+|..+|..+. +.++|++|+||+.|....
T Consensus 176 ~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~ 240 (467)
T KOG1221|consen 176 CNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTY 240 (467)
T ss_pred CCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccc
Confidence 013333488999999885 468999999999998864
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.8e-12 Score=97.52 Aligned_cols=143 Identities=18% Similarity=0.184 Sum_probs=97.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|.+|.+++++|+++|+.|++..|+..+...... ..+.....++.++.+|+.|.+++.++++. -.+|+
T Consensus 13 tGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 88 (261)
T PRK08936 13 TGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVA----EEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDV 88 (261)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999998886533211100 11111234678899999999988887653 26899
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+++..... ++.+++.+. + ..++|++||...+. +..+...
T Consensus 89 lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~ 157 (261)
T PRK08936 89 MINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI-----------PWPLFVH 157 (261)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC-----------CCCCCcc
Confidence 99999863211 123344444 2 36899999854321 1112334
Q ss_pred c-hhhhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|.+.+.+. ...+++++.++||++..+.
T Consensus 158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 195 (261)
T PRK08936 158 YAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPI 195 (261)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCc
Confidence 6 8887776654 2358999999999998774
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.5e-12 Score=95.62 Aligned_cols=137 Identities=19% Similarity=0.222 Sum_probs=93.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|+.|++.+|+.++..... .....++.++.+|+.+.+++.++++. .++|.
T Consensus 12 tGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 12 TGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALA--------AELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999999988888755422110 11124678899999999988877643 26999
Q ss_pred EEeccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecce-ecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~----~~ll~~~~--~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+++.... +. +.+++.+. +..++|++||.. .++.+. ...
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------~~~ 151 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG------------QAN 151 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC------------Ccc
Confidence 9999986321 11 22222232 456899999964 443221 123
Q ss_pred c-hhhhhHHHHH-------hhcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+. ...++++++++||++..+
T Consensus 152 Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~ 188 (245)
T PRK12936 152 YCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESA 188 (245)
T ss_pred hHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCc
Confidence 5 7777665543 235899999999988665
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.5e-12 Score=97.50 Aligned_cols=144 Identities=19% Similarity=0.161 Sum_probs=97.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|.+|.+++++|+++|++|++++|+.++..... ..+.....++..+.+|+.|++++.++++. -++|+
T Consensus 15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 89 (253)
T PRK05867 15 TGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLA-----DEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDI 89 (253)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999765432111 11112234678899999999998887753 27999
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC-C--CCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP-N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~-~--~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||++|.... + ++.++..+. . ..+++++||....-. . .+.....
T Consensus 90 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~-------~~~~~~~ 160 (253)
T PRK05867 90 AVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII--N-------VPQQVSH 160 (253)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC--C-------CCCCccc
Confidence 9999986321 1 122333332 2 246888888543100 0 0011234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..|+++..++||.+-.+.
T Consensus 161 Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~ 198 (253)
T PRK05867 161 YCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTEL 198 (253)
T ss_pred hHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcc
Confidence 6 88988887653 358999999999997763
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.3e-12 Score=95.06 Aligned_cols=140 Identities=18% Similarity=0.177 Sum_probs=99.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+ +...+++++.+|+.|++++.++++.. ++|.+||+
T Consensus 3 tGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-----~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ 76 (230)
T PRK07041 3 VGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAA-----RAL-GGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT 76 (230)
T ss_pred ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHH-hcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence 799999999999999999999999999854422110 001 11246889999999999999988753 47999999
Q ss_pred cCCCccc--------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHH
Q 029198 80 NGREADE--------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE 136 (197)
Q Consensus 80 a~~~~~~--------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e 136 (197)
++..... ...++++.. +..++|++||...+... .+...| .+|...+
T Consensus 77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~-----------~~~~~Y~~sK~a~~ 145 (230)
T PRK07041 77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPS-----------ASGVLQGAINAALE 145 (230)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCC-----------CcchHHHHHHHHHH
Confidence 9863211 122333323 45799999997775321 123346 8899988
Q ss_pred HHHhh-----cCCcEEEEccceeeCC
Q 029198 137 SVLES-----KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 137 ~~~~~-----~~~~~~i~r~~~i~g~ 157 (197)
.+.+. .+++++.++||++-.+
T Consensus 146 ~~~~~la~e~~~irv~~i~pg~~~t~ 171 (230)
T PRK07041 146 ALARGLALELAPVRVNTVSPGLVDTP 171 (230)
T ss_pred HHHHHHHHHhhCceEEEEeecccccH
Confidence 87643 3578999999987654
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.4e-12 Score=96.58 Aligned_cols=145 Identities=14% Similarity=0.142 Sum_probs=92.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|+.+.++.......... ....+.....++.++.+|+.+++++.++++. .++|+
T Consensus 14 tGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 92 (257)
T PRK12744 14 AGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEE-TVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDI 92 (257)
T ss_pred ECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHH-HHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCE
Confidence 79999999999999999999988887754321111100 0011111224688899999999999888763 26899
Q ss_pred EEeccCCCcc--------------------chHHHHHh----CCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
+||+||.... ++..++++ ++...++++++|....... + ....| .
T Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~----------~-~~~~Y~~ 161 (257)
T PRK12744 93 AINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT----------P-FYSAYAG 161 (257)
T ss_pred EEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC----------C-Ccccchh
Confidence 9999986211 11112222 2223466665332221110 0 12345 8
Q ss_pred hhhhHHHHHhh-------cCCcEEEEccceeeCC
Q 029198 131 GKLNTESVLES-------KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 131 ~k~~~e~~~~~-------~~~~~~i~r~~~i~g~ 157 (197)
+|.+.+.+.+. .+++++.++||++.++
T Consensus 162 sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~ 195 (257)
T PRK12744 162 SKAPVEHFTRAASKEFGARGISVTAVGPGPMDTP 195 (257)
T ss_pred hHHHHHHHHHHHHHHhCcCceEEEEEecCccccc
Confidence 99999887642 4799999999999765
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.6e-12 Score=96.36 Aligned_cols=141 Identities=17% Similarity=0.217 Sum_probs=95.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|+++++.|++.|++|++++|+++...... .. .....+++++.+|+.+++++.++++.. .+|.
T Consensus 11 tGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 84 (238)
T PRK05786 11 IGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMK-----KT-LSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDG 84 (238)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HH-HHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 699999999999999999999999999865421110 00 011235788999999999888776532 4799
Q ss_pred EEeccCCCccc----------------------hHHHHHhCCCCCcEEEEeccee-cccCCCCCCCCCCCCCCCCcc-hh
Q 029198 76 VYDINGREADE----------------------VEPILDALPNLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRH-KG 131 (197)
Q Consensus 76 vi~~a~~~~~~----------------------~~~ll~~~~~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~~~-~~ 131 (197)
++|+++..... .+.++..++...++|++||... ++. ..+...| .+
T Consensus 85 ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~~Y~~s 153 (238)
T PRK05786 85 LVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA-----------SPDQLSYAVA 153 (238)
T ss_pred EEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC-----------CCCchHHHHH
Confidence 99998753210 1223333332357899998643 211 1122346 88
Q ss_pred hhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 132 KLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 132 k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
|...+.++ +..+++++++||++++++.
T Consensus 154 K~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~ 187 (238)
T PRK05786 154 KAGLAKAVEILASELLGRGIRVNGIAPTTISGDF 187 (238)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCC
Confidence 88776543 2358999999999999873
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.6e-12 Score=93.30 Aligned_cols=131 Identities=16% Similarity=0.182 Sum_probs=90.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH-HHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~l~~~~~~~~~d~vi~~ 79 (197)
|||+|++|.++++.|+++|++|++++|++.... ..++.++.+|+.++ +.+.+.+. ++|+|||+
T Consensus 11 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~--~id~lv~~ 74 (235)
T PRK06550 11 TGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL--------------SGNFHFLQLDLSDDLEPLFDWVP--SVDILCNT 74 (235)
T ss_pred cCCCchHHHHHHHHHHHCCCEEEEEeCCccccc--------------CCcEEEEECChHHHHHHHHHhhC--CCCEEEEC
Confidence 799999999999999999999999999754311 13578899999987 33333333 79999999
Q ss_pred cCCCcc---------------------chHHHHH----hCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hh
Q 029198 80 NGREAD---------------------EVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG 131 (197)
Q Consensus 80 a~~~~~---------------------~~~~ll~----~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~ 131 (197)
++.... +...+++ .++ +..++|++||...+.... ....| .+
T Consensus 75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~Y~~s 143 (235)
T PRK06550 75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGG-----------GGAAYTAS 143 (235)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC-----------CCcccHHH
Confidence 984210 0112222 232 346899999965432111 12235 78
Q ss_pred hhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 132 k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
|...+.+.+ ..++++++++||++.++.
T Consensus 144 K~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~ 177 (235)
T PRK06550 144 KHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPM 177 (235)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcc
Confidence 888776543 358999999999998874
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=3e-12 Score=96.00 Aligned_cols=146 Identities=13% Similarity=0.065 Sum_probs=97.2
Q ss_pred CCccc--chHHHHHHHHHHCCCeEEEEecCCCCccCCCC--CC----CchhhhhccCceEEEeecCCCHHHHHhhhhc--
Q 029198 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP--GE----SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-- 70 (197)
Q Consensus 1 tGatG--~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-- 70 (197)
|||+| .+|.+++++|+++|++|++++|++.+...... .. ....+.....+++++.+|+.+.+++.++++.
T Consensus 11 tGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 90 (256)
T PRK12748 11 TGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVFYAVS 90 (256)
T ss_pred eCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 69985 79999999999999999999997332110000 00 0011112234689999999999988877753
Q ss_pred ---cCccEEEeccCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceecccCCCCCCCCCC
Q 029198 71 ---KGFDVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETD 121 (197)
Q Consensus 71 ---~~~d~vi~~a~~~~~--------------------~~~~ll~~----~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~ 121 (197)
-.+|+|||+++.... +...++++ +. ...++|++||...++...
T Consensus 91 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-------- 162 (256)
T PRK12748 91 ERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMP-------- 162 (256)
T ss_pred HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCC--------
Confidence 268999999986311 12223323 22 346899999976653211
Q ss_pred CCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
....| .+|...+.+++ ..+++++.++||.+..+
T Consensus 163 ---~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~ 203 (256)
T PRK12748 163 ---DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTG 203 (256)
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCC
Confidence 12346 88999988753 25899999999998765
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.7e-12 Score=96.42 Aligned_cols=141 Identities=15% Similarity=0.123 Sum_probs=93.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|++.|++|+++.+........+. ..+.....++.++.+|+.|.+++.+++++. .+|+
T Consensus 15 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~ 90 (258)
T PRK09134 15 TGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALA----AEIRALGRRAVALQADLADEAEVRALVARASAALGPITL 90 (258)
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999998875432111000 111112346889999999999988887632 5899
Q ss_pred EEeccCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceecccCCCCCCCCCCCCCC-CCc
Q 029198 76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~----~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~ 128 (197)
|||++|.... +...++++ ++ ...++++++|...+.. .| ...
T Consensus 91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~------------~p~~~~ 158 (258)
T PRK09134 91 LVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL------------NPDFLS 158 (258)
T ss_pred EEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC------------CCCchH
Confidence 9999986311 12223332 22 2357787776544321 12 124
Q ss_pred c-hhhhhHHHHHhh------cCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLES------KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~~------~~~~~~i~r~~~i~g~ 157 (197)
| .+|..++.+.+. .++.++.++||++...
T Consensus 159 Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~ 194 (258)
T PRK09134 159 YTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPS 194 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCC
Confidence 6 899888776532 2489999999998764
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.7e-12 Score=95.88 Aligned_cols=138 Identities=17% Similarity=0.211 Sum_probs=96.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|++.|++|++++|+++...... .....++.++.+|+.|++++.++++.. ++|+
T Consensus 12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 12 TGGGSGIGRALVERFLAEGARVAVLERSAEKLASLR--------QRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999865432110 111245788999999999888776532 6999
Q ss_pred EEeccCCCcc-------c----------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD-------E----------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 76 vi~~a~~~~~-------~----------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
+||++|.... . ++.++..++ ...++|++||...+.... .
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~ 152 (263)
T PRK06200 84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGG-----------G 152 (263)
T ss_pred EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC-----------C
Confidence 9999985310 0 122333333 335799999876542211 1
Q ss_pred CCcc-hhhhhHHHHHhh------cCCcEEEEccceeeCC
Q 029198 126 KSRH-KGKLNTESVLES------KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~~------~~~~~~i~r~~~i~g~ 157 (197)
...| .+|...+.+.+. .++++..+.||++..+
T Consensus 153 ~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~ 191 (263)
T PRK06200 153 GPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTD 191 (263)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccC
Confidence 2246 889998876532 3599999999999766
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.5e-12 Score=93.12 Aligned_cols=135 Identities=19% Similarity=0.224 Sum_probs=98.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhcc-CceEEEeecCCCHHHHHhhhh----c-cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLS----A-KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~----~-~~~d 74 (197)
||||+.+|.++++.|++.|++|++..|+.+.....-. +.. ..+.....|++|.+++..+++ + .++|
T Consensus 12 TGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~--------~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 12 TGASSGIGEATARALAEAGAKVVLAARREERLEALAD--------EIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred ecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHH--------hhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 7999999999999999999999999999887432211 111 468899999999988666554 2 2699
Q ss_pred EEEeccCCCcc------------------------chHHHHHhCC--CCCcEEEEeccee-cccCCCCCCCCCCCCCC-C
Q 029198 75 VVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDP-K 126 (197)
Q Consensus 75 ~vi~~a~~~~~------------------------~~~~ll~~~~--~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~-~ 126 (197)
++||+||.... .++.+|..|. +..++|++||..- | +.| .
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~-------------~y~~~ 150 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY-------------PYPGG 150 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc-------------cCCCC
Confidence 99999997421 1455566665 5569999999653 2 112 2
Q ss_pred Ccc-hhhhhHHHHHh-------hcCCcEEEEccceeeC
Q 029198 127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYG 156 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g 156 (197)
+-| .+|+.+..+.. ..+++++.+-||.+-.
T Consensus 151 ~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~ 188 (246)
T COG4221 151 AVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVET 188 (246)
T ss_pred ccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecc
Confidence 235 88988877642 3689999999999844
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.7e-12 Score=95.11 Aligned_cols=135 Identities=18% Similarity=0.149 Sum_probs=94.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|.+|.+++++|+++|++|++++|+++..... +.. .++.++.+|+.|.+++.++++.. ++|+
T Consensus 8 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 77 (236)
T PRK06483 8 TGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDG--------LRQ--AGAQCIQADFSTNAGIMAFIDELKQHTDGLRA 77 (236)
T ss_pred ECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH--------HHH--cCCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence 79999999999999999999999999986542111 111 23678899999999888876542 5999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--C--CCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREADE------------------------VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~--~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+||++|..... ++.++..++ + ..++|++||....... ....
T Consensus 78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~-----------~~~~ 146 (236)
T PRK06483 78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS-----------DKHI 146 (236)
T ss_pred EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC-----------CCCc
Confidence 99999863110 122334444 2 3589999885432110 1123
Q ss_pred cc-hhhhhHHHHHhh------cCCcEEEEccceeeC
Q 029198 128 RH-KGKLNTESVLES------KGVNWTSLRPVYIYG 156 (197)
Q Consensus 128 ~~-~~k~~~e~~~~~------~~~~~~i~r~~~i~g 156 (197)
.| .+|...+.+.+. .++++..++||++..
T Consensus 147 ~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~ 182 (236)
T PRK06483 147 AYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILF 182 (236)
T ss_pred cHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceec
Confidence 46 899999887642 359999999999854
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.5e-12 Score=96.87 Aligned_cols=140 Identities=16% Similarity=0.132 Sum_probs=95.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc----cCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~----~~~d~v 76 (197)
|||+|++|.+++++|+++|++|++++|+++...... .++ ....++.++.+|+.|++++.++++. ..+|+|
T Consensus 11 tG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~l 84 (263)
T PRK09072 11 TGASGGIGQALAEALAAAGARLLLVGRNAEKLEALA-----ARL-PYPGRHRWVVADLTSEAGREAVLARAREMGGINVL 84 (263)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEE
Confidence 799999999999999999999999999865432111 111 1234788999999999988877653 268999
Q ss_pred EeccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 77 YDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 77 i~~a~~~~~--------------------~~----~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
||++|.... ++ +.++..+. +..+++++||...+.... ....|
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~Y~ 153 (263)
T PRK09072 85 INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYP-----------GYASYC 153 (263)
T ss_pred EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCC-----------CccHHH
Confidence 999986421 11 22333333 346788888854321110 12235
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+++ ..++.++.+.||.+..+
T Consensus 154 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~ 188 (263)
T PRK09072 154 ASKFALRGFSEALRRELADTGVRVLYLAPRATRTA 188 (263)
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEecCccccc
Confidence 78887766542 35799999999988654
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.2e-12 Score=95.57 Aligned_cols=142 Identities=15% Similarity=0.160 Sum_probs=96.9
Q ss_pred CCccc-chHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-c-cCceEEEeecCCCHHHHHhhhhc-----cC
Q 029198 1 MGGTR-FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSA-----KG 72 (197)
Q Consensus 1 tGatG-~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~d~~~~~~l~~~~~~-----~~ 72 (197)
|||+| .+|.++++.|+++|++|++.+|+.++..... .++.+ . ..++.++.+|+.+++++.++++. ..
T Consensus 23 tG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 97 (262)
T PRK07831 23 TAAAGTGIGSATARRALEEGARVVISDIHERRLGETA-----DELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGR 97 (262)
T ss_pred ECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 69997 6999999999999999999998765422111 01111 1 13578899999999988887753 26
Q ss_pred ccEEEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 73 FDVVYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 73 ~d~vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
+|+|||++|..... .+.++..++ + ..+++++||...+.. ..+
T Consensus 98 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~-----------~~~ 166 (262)
T PRK07831 98 LDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA-----------QHG 166 (262)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-----------CCC
Confidence 89999999863210 122333333 2 457888887543211 012
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ ..+++++.++||.+..+.
T Consensus 167 ~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~ 207 (262)
T PRK07831 167 QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPF 207 (262)
T ss_pred CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcc
Confidence 2346 88999888753 368999999999998874
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.5e-12 Score=86.67 Aligned_cols=131 Identities=21% Similarity=0.179 Sum_probs=101.2
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
+||||-+|..+++++++.+ .+|+++.|.+...... ...+.....|....+++...++ ++|+.|+
T Consensus 24 lGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at------------~k~v~q~~vDf~Kl~~~a~~~q--g~dV~Fc 89 (238)
T KOG4039|consen 24 LGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT------------DKVVAQVEVDFSKLSQLATNEQ--GPDVLFC 89 (238)
T ss_pred EeccccccHHHHHHHHhcccceeEEEEEeccCCCccc------------cceeeeEEechHHHHHHHhhhc--CCceEEE
Confidence 5999999999999999998 4999999985332211 2467777888888888888888 9999999
Q ss_pred ccCCCc-------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhc
Q 029198 79 INGREA-------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (197)
Q Consensus 79 ~a~~~~-------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~ 142 (197)
+.|.+- +....+.++++ ++++|+.+||.+.-. ...-.| +.|.+.|+-+.+.
T Consensus 90 aLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~-------------sSrFlY~k~KGEvE~~v~eL 156 (238)
T KOG4039|consen 90 ALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADP-------------SSRFLYMKMKGEVERDVIEL 156 (238)
T ss_pred eecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCc-------------ccceeeeeccchhhhhhhhc
Confidence 877641 12445566666 899999999977621 112236 8899999998887
Q ss_pred CC-cEEEEccceeeCCC
Q 029198 143 GV-NWTSLRPVYIYGPL 158 (197)
Q Consensus 143 ~~-~~~i~r~~~i~g~~ 158 (197)
++ .++|+|||.+.+..
T Consensus 157 ~F~~~~i~RPG~ll~~R 173 (238)
T KOG4039|consen 157 DFKHIIILRPGPLLGER 173 (238)
T ss_pred cccEEEEecCcceeccc
Confidence 77 59999999999975
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2e-12 Score=99.11 Aligned_cols=141 Identities=23% Similarity=0.251 Sum_probs=98.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|.+|.++++.|++.|++|++++|+++....... .+ .....+..+.+|+.|.+++.++++. -.+|+
T Consensus 15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~-----~l-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 88 (296)
T PRK05872 15 TGAARGIGAELARRLHARGAKLALVDLEEAELAALAA-----EL-GGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDV 88 (296)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----Hh-cCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998654321110 00 0123466677999999988887653 26899
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
|||++|..... ++.++..+. ...+||++||...+.... ....|
T Consensus 89 vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y~ 157 (296)
T PRK05872 89 VVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP-----------GMAAYC 157 (296)
T ss_pred EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC-----------CchHHH
Confidence 99999863211 122233333 346899999976653211 12346
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++.++.+.||++..+.
T Consensus 158 asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~ 193 (296)
T PRK05872 158 ASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDL 193 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchh
Confidence 88988887653 368999999999987763
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.6e-12 Score=96.48 Aligned_cols=142 Identities=21% Similarity=0.215 Sum_probs=93.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhcc-CceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
|||+|.+|.+++++|+++|++|++++|+++...... .++.... ....++.+|+.|++++.++++. .++|
T Consensus 6 tGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 6 TGAASGIGRATALRLAAQGAELFLTDRDADGLAQTV-----ADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 799999999999999999999999999765422110 1111111 2345678999999988776653 2589
Q ss_pred EEEeccCCCccc--------------------h----HHHHHhCC---CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREADE--------------------V----EPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 75 ~vi~~a~~~~~~--------------------~----~~ll~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+|||++|..... . +.++..+. ...++|++||...+... ....
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~-----------~~~~ 149 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL-----------PWHA 149 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC-----------CCCc
Confidence 999999863211 1 22333332 23689999986532111 0122
Q ss_pred cc-hhhhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+. ...++++++++||.+.++.
T Consensus 150 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~ 188 (272)
T PRK07832 150 AYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL 188 (272)
T ss_pred chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 35 7787666543 3468999999999998764
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.4e-12 Score=96.25 Aligned_cols=141 Identities=23% Similarity=0.183 Sum_probs=100.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc-cC-ceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SS-KILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+..||.+++.+|+++|..++.+.|..+.....-. ++.+. .. ++..+++|++|.+++.++++. -++
T Consensus 18 TGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~-----~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~v 92 (282)
T KOG1205|consen 18 TGASSGIGEALAYELAKRGAKLVLVARRARRLERVAE-----ELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRV 92 (282)
T ss_pred eCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHH-----HHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCC
Confidence 8999999999999999999999999998776432211 11111 12 599999999999999988643 389
Q ss_pred cEEEeccCCCcc------------------------chHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~------------------------~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|++||+||.... .++.++..|+ +..|||.+||..-+-..+ ...
T Consensus 93 DvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P-----------~~~ 161 (282)
T KOG1205|consen 93 DVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP-----------FRS 161 (282)
T ss_pred CEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC-----------ccc
Confidence 999999998531 2677888888 448999999966432111 112
Q ss_pred cc-hhhhhHHHHHhh-------cCCcEE-EEccceeeCC
Q 029198 128 RH-KGKLNTESVLES-------KGVNWT-SLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~~~~-------~~~~~~-i~r~~~i~g~ 157 (197)
.| .||.+.+.+++. .+..+. .+.||+|-..
T Consensus 162 ~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te 200 (282)
T KOG1205|consen 162 IYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETE 200 (282)
T ss_pred ccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeec
Confidence 45 999999987632 222222 5889988654
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.1e-12 Score=95.56 Aligned_cols=142 Identities=14% Similarity=0.135 Sum_probs=95.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhh-hccCceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
|||++.||.+++++|++.|++|+++.|+.++...... ..+. ....++.++.+|+.|++++.++++. .++|
T Consensus 14 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 89 (260)
T PRK08416 14 SGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIA----EDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVD 89 (260)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCcc
Confidence 7999999999999999999999988765432111100 0111 1124688999999999999887764 2689
Q ss_pred EEEeccCCCc-------c--------c---------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCC
Q 029198 75 VVYDINGREA-------D--------E---------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT 122 (197)
Q Consensus 75 ~vi~~a~~~~-------~--------~---------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 122 (197)
++||+|+... . . ++.++..++ +..+||++||.......
T Consensus 90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 159 (260)
T PRK08416 90 FFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI---------- 159 (260)
T ss_pred EEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC----------
Confidence 9999997421 0 0 223344454 34689999996432110
Q ss_pred CCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.....| .+|...+.+.+ ..+++++.+.||++-.+
T Consensus 160 -~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~ 201 (260)
T PRK08416 160 -ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTD 201 (260)
T ss_pred -CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCh
Confidence 012245 88999887653 35899999999988665
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.1e-11 Score=91.04 Aligned_cols=138 Identities=17% Similarity=0.100 Sum_probs=95.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc---cCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~---~~~d~vi 77 (197)
|||+|.+|++++++|++.|++|++++|+++.... +.. .+++++.+|+.+.+++.++++. .++|.||
T Consensus 7 tG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~---------~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi 75 (222)
T PRK06953 7 VGASRGIGREFVRQYRADGWRVIATARDAAALAA---------LQA--LGAEALALDVADPASVAGLAWKLDGEALDAAV 75 (222)
T ss_pred EcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH---------HHh--ccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence 7999999999999999999999999998654221 111 2467899999999988886532 3599999
Q ss_pred eccCCCcc----------------------chHHHHHhC----C-CCCcEEEEecce-ecccCCCCCCCCCCCCCCCCcc
Q 029198 78 DINGREAD----------------------EVEPILDAL----P-NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 78 ~~a~~~~~----------------------~~~~ll~~~----~-~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|+++.... ++.++++++ . ...+++++||.. .++.... .+...|
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------~~~~~Y 146 (222)
T PRK06953 76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATG---------TTGWLY 146 (222)
T ss_pred ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccC---------CCcccc
Confidence 99886410 122233332 2 234788888854 4442211 111246
Q ss_pred -hhhhhHHHHHhh-----cCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLES-----KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~~-----~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+++. .+++++.++||++..+.
T Consensus 147 ~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~ 181 (222)
T PRK06953 147 RASKAALNDALRAASLQARHATCIALHPGWVRTDM 181 (222)
T ss_pred HHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCC
Confidence 889998887643 36889999999998874
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.6e-12 Score=94.53 Aligned_cols=139 Identities=18% Similarity=0.214 Sum_probs=94.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|++.|++|++++|+.+...... .....++.++.+|+.|.+++.++++. .++|+
T Consensus 11 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 11 TGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELE--------AAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------hhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999765422111 01124578899999999888777653 26899
Q ss_pred EEeccCCCc--------c------c---------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 76 VYDINGREA--------D------E---------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 76 vi~~a~~~~--------~------~---------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
+||+||... . . ++.++..+. ...++|++||...+... ..
T Consensus 83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~ 151 (262)
T TIGR03325 83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPN-----------GG 151 (262)
T ss_pred EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCC-----------CC
Confidence 999998521 0 0 112223332 23578888885543111 11
Q ss_pred CCcc-hhhhhHHHHHhh------cCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLES------KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~~------~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+. ..+++..+.||++..+.
T Consensus 152 ~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~ 191 (262)
T TIGR03325 152 GPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDL 191 (262)
T ss_pred CchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence 2246 889998877532 23899999999998763
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.2e-12 Score=93.30 Aligned_cols=142 Identities=15% Similarity=0.114 Sum_probs=96.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+.++..... ..++.....++.++.+|+.|.+++.++++. ..+|.
T Consensus 4 tGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~ 79 (239)
T TIGR01831 4 TGASRGIGRAIANRLAADGFEICVHYHSGRSDAESV----VSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG 79 (239)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999988654321111 011222235688999999999988877653 25899
Q ss_pred EEeccCCCcc--------------------chHHHHHhC-----C--CCCcEEEEecce-ecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD--------------------EVEPILDAL-----P--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~~-----~--~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~ 127 (197)
+||+++.... ++..+++++ + +..++|++||.. .++.+ ...
T Consensus 80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~~ 147 (239)
T TIGR01831 80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR------------GQV 147 (239)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC------------CCc
Confidence 9999885311 122233322 2 346899999955 44321 122
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 148 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 186 (239)
T TIGR01831 148 NYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEM 186 (239)
T ss_pred chHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCcccc
Confidence 35 77887665542 358999999999998774
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.6e-12 Score=106.22 Aligned_cols=141 Identities=16% Similarity=0.195 Sum_probs=99.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.++++.|++.|++|++++|+.+....... .+.. ..++.++.+|+.|.+++.++++.. ++|+
T Consensus 428 TGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~-----~l~~-~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDv 501 (681)
T PRK08324 428 TGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAA-----ELGG-PDRALGVACDVTDEAAVQAAFEEAALAFGGVDI 501 (681)
T ss_pred ecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH-----HHhc-cCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998754321110 0111 136889999999999988877642 6999
Q ss_pred EEeccCCCccc--------------------hHHH----HHhCC--CC-CcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE--------------------VEPI----LDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~--------------------~~~l----l~~~~--~~-~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||++|..... ...+ ++.++ +. .+||++||...+... .....
T Consensus 502 vI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~-----------~~~~~ 570 (681)
T PRK08324 502 VVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG-----------PNFGA 570 (681)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC-----------CCcHH
Confidence 99999853221 2223 34443 33 689999996653211 11234
Q ss_pred c-hhhhhHHHHHhh-------cCCcEEEEccceee-CCC
Q 029198 129 H-KGKLNTESVLES-------KGVNWTSLRPVYIY-GPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~~-------~~~~~~i~r~~~i~-g~~ 158 (197)
| .+|...+.+.+. .++++++++|+.+| +..
T Consensus 571 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~ 609 (681)
T PRK08324 571 YGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSG 609 (681)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCc
Confidence 6 889998887642 47999999999998 543
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.1e-12 Score=95.50 Aligned_cols=141 Identities=21% Similarity=0.222 Sum_probs=97.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|.+|.+++++|+++|++|++++|+++...... .++.. ..++.++.+|+.|+++++++++. -++|+
T Consensus 6 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 6 TASSRGIGFNVARELLKKGARVVISSRNEENLEKAL-----KELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred EcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999865422111 11111 13578899999999998887753 26999
Q ss_pred EEeccCCCcc--------c------------------hHHHHHhCC---CCCcEEEEecceecccCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD--------E------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 76 vi~~a~~~~~--------~------------------~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 126 (197)
|||++|.... . +..++..+. +..+||++||....... .+.
T Consensus 80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~-----------~~~ 148 (259)
T PRK08340 80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM-----------PPL 148 (259)
T ss_pred EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCC-----------CCc
Confidence 9999985310 0 112233222 34689999997653211 112
Q ss_pred Ccc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
..| .+|...+.+.+ ..|+++..+.||++-.+.
T Consensus 149 ~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~ 188 (259)
T PRK08340 149 VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPG 188 (259)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCcc
Confidence 346 78888877653 357999999999987763
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.9e-12 Score=94.06 Aligned_cols=139 Identities=14% Similarity=0.106 Sum_probs=95.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc---------
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~--------- 71 (197)
|||+|++|++++++|+++|++|++++|++.+....+. .....+++++.+|+.+++++.++++..
T Consensus 7 tGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK06924 7 TGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA-------EQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV 79 (251)
T ss_pred ecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH-------hccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence 7999999999999999999999999997632111110 111346889999999999998877632
Q ss_pred CccEEEeccCCCcc---------------------c----hHHHHHhCC---CCCcEEEEecceecccCCCCCCCCCCCC
Q 029198 72 GFDVVYDINGREAD---------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTV 123 (197)
Q Consensus 72 ~~d~vi~~a~~~~~---------------------~----~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 123 (197)
..+.+||++|.... + .+.++..++ +..+||++||...+. +.
T Consensus 80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~ 148 (251)
T PRK06924 80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-----------PY 148 (251)
T ss_pred CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC-----------CC
Confidence 12278888775210 1 334455554 235899999965431 11
Q ss_pred CCCCcc-hhhhhHHHHHh---------hcCCcEEEEccceeeCC
Q 029198 124 DPKSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 124 ~~~~~~-~~k~~~e~~~~---------~~~~~~~i~r~~~i~g~ 157 (197)
.+...| .+|...+.+.+ ..++++..++||++-.+
T Consensus 149 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 192 (251)
T PRK06924 149 FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN 192 (251)
T ss_pred CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence 223456 88998888653 24789999999988665
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.2e-11 Score=101.89 Aligned_cols=139 Identities=17% Similarity=0.243 Sum_probs=98.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|.||.+++++|+++|++|++++|+++...... .+...++..+.+|+.|++++.++++. -.+|+
T Consensus 275 tGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 275 TGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLA--------EALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999765422111 11124567789999999998887763 25899
Q ss_pred EEeccCCCcc--c-----------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREAD--E-----------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~--~-----------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
+||+||.... . ++.++..+++..+||++||...+... .+...|
T Consensus 347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~ 415 (520)
T PRK06484 347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL-----------PPRNAYC 415 (520)
T ss_pred EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC-----------CCCchhH
Confidence 9999986411 0 22233334434689999996654211 122346
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||++.++.
T Consensus 416 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 451 (520)
T PRK06484 416 ASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPA 451 (520)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCch
Confidence 88999887653 358999999999998763
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1e-11 Score=92.62 Aligned_cols=141 Identities=14% Similarity=0.100 Sum_probs=92.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc-cCceEEEeecCC--CHHHHHhhhhc-----cC
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRK--DYDFVKSSLSA-----KG 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~--~~~~l~~~~~~-----~~ 72 (197)
|||+|++|.+++++|++.|++|++++|+.++..... .++.+. ..++.++.+|+. +.+++.++++. .+
T Consensus 18 tG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 92 (247)
T PRK08945 18 TGAGDGIGREAALTYARHGATVILLGRTEEKLEAVY-----DEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGR 92 (247)
T ss_pred eCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHH-----HHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCC
Confidence 799999999999999999999999999865422111 111111 235677788886 56655554432 26
Q ss_pred ccEEEeccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 73 FDVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 73 ~d~vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
+|.|||+|+.... + ++.++..++ +..+|+++||....... ..
T Consensus 93 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-----------~~ 161 (247)
T PRK08945 93 LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR-----------AN 161 (247)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC-----------CC
Confidence 9999999976311 1 222333333 56789999986543111 11
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
...| .+|...+.+++ ..+++++.++||.+-++
T Consensus 162 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~ 201 (247)
T PRK08945 162 WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA 201 (247)
T ss_pred CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence 2246 88988887653 24789999999988554
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.7e-11 Score=94.72 Aligned_cols=150 Identities=15% Similarity=0.138 Sum_probs=97.7
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
|||++.+|.+++++|+++| ++|++++|+.+...... ..+......+.++.+|+.|.++++++++. .++|
T Consensus 9 TGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD 83 (314)
T TIGR01289 9 TGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAA-----KSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLD 83 (314)
T ss_pred ECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-----HHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 7999999999999999999 99999999865432111 01111124578889999999988877653 2699
Q ss_pred EEEeccCCCcc----------c---------------hHHHHHhCC-C---CCcEEEEecceecccCCC----CC-----
Q 029198 75 VVYDINGREAD----------E---------------VEPILDALP-N---LEQFIYCSSAGVYLKSDL----LP----- 116 (197)
Q Consensus 75 ~vi~~a~~~~~----------~---------------~~~ll~~~~-~---~~~~v~~Ss~~vyg~~~~----~~----- 116 (197)
++||+||.... . ++.++..++ . ..+||++||...+..... .+
T Consensus 84 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~ 163 (314)
T TIGR01289 84 ALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGD 163 (314)
T ss_pred EEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccccc
Confidence 99999986210 0 233455554 2 369999999765432100 00
Q ss_pred -------------CCCCCCCCCCCcc-hhhhhHHHHH----h----hcCCcEEEEccceee
Q 029198 117 -------------HCETDTVDPKSRH-KGKLNTESVL----E----SKGVNWTSLRPVYIY 155 (197)
Q Consensus 117 -------------~~e~~~~~~~~~~-~~k~~~e~~~----~----~~~~~~~i~r~~~i~ 155 (197)
+.+..+..+...| .+|.+...+. + ..++.++.++||++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~ 224 (314)
T TIGR01289 164 LSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIA 224 (314)
T ss_pred cccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCccc
Confidence 0111112233346 8898865533 1 147999999999985
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.5e-12 Score=91.55 Aligned_cols=132 Identities=14% Similarity=0.143 Sum_probs=93.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc--CccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~--~~d~vi~ 78 (197)
|||+|.+|+++++.|+++|++|++++|++++...... ..++.++.+|+.|++++.++++.. .+|++||
T Consensus 6 tGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~ 75 (223)
T PRK05884 6 TGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAK----------ELDVDAIVCDNTDPASLEEARGLFPHHLDTIVN 75 (223)
T ss_pred EeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------hccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence 7999999999999999999999999997654221100 013578889999999998887642 5899999
Q ss_pred ccCCCc----c-------c------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 79 INGREA----D-------E------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 79 ~a~~~~----~-------~------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+++... . . ++.++..++...++|++||... .....|
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~---------------~~~~~Y 140 (223)
T PRK05884 76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP---------------PAGSAE 140 (223)
T ss_pred CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC---------------CCcccc
Confidence 986310 0 0 1223333343368999998530 012346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..+++++.+.||++..+
T Consensus 141 ~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~ 176 (223)
T PRK05884 141 AAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQP 176 (223)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCch
Confidence 88988887653 36899999999998765
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.8e-11 Score=90.90 Aligned_cols=142 Identities=13% Similarity=0.081 Sum_probs=92.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCC--HHHHHhhhh----c--c
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKD--YDFVKSSLS----A--K 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~--~~~l~~~~~----~--~ 71 (197)
|||+|++|.+++++|+++|++|++++|+++...... .++.. ....+.++.+|+.+ .+++.++++ . .
T Consensus 12 tG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~ 86 (239)
T PRK08703 12 TGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVY-----DAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQG 86 (239)
T ss_pred ECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHH-----HHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCC
Confidence 699999999999999999999999999875432110 11111 12356778889875 334443332 1 2
Q ss_pred CccEEEeccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 72 GFDVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 72 ~~d~vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
.+|+|||+|+.... + ++.+++.+. +..+++++||..... +..
T Consensus 87 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~ 155 (239)
T PRK08703 87 KLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET-----------PKA 155 (239)
T ss_pred CCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc-----------CCC
Confidence 68999999985210 1 122333333 456899998844321 111
Q ss_pred CCCcc-hhhhhHHHHHhh-------c-CCcEEEEccceeeCCC
Q 029198 125 PKSRH-KGKLNTESVLES-------K-GVNWTSLRPVYIYGPL 158 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~~-------~-~~~~~i~r~~~i~g~~ 158 (197)
....| .+|...+.+++. . +++++.++||+++++.
T Consensus 156 ~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~ 198 (239)
T PRK08703 156 YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQ 198 (239)
T ss_pred CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcc
Confidence 12346 889998887532 2 6999999999999985
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.2e-11 Score=95.72 Aligned_cols=143 Identities=16% Similarity=0.187 Sum_probs=95.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCC--HHHHHh---hhhccCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKD--YDFVKS---SLSAKGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~--~~~l~~---~~~~~~~ 73 (197)
|||||.+|.+++++|+++|++|++++|++++..... .++.+. ..++..+.+|+.+ .+.+.+ .+...++
T Consensus 59 TGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~di 133 (320)
T PLN02780 59 TGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVS-----DSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDV 133 (320)
T ss_pred eCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-----HHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCCc
Confidence 799999999999999999999999999876532211 111111 1357788899985 333333 3333357
Q ss_pred cEEEeccCCCcc----------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~----------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|++||+||.... + ++.++..+. +..++|++||...+... ..|
T Consensus 134 dilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~----------~~p 203 (320)
T PLN02780 134 GVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP----------SDP 203 (320)
T ss_pred cEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC----------CCc
Confidence 799999986421 0 233444444 56799999997653210 011
Q ss_pred -CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 -KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 -~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ ..|++++.+.||.+-.+.
T Consensus 204 ~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~ 245 (320)
T PLN02780 204 LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKM 245 (320)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCc
Confidence 2346 88999887653 358999999999997763
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.6e-11 Score=93.44 Aligned_cols=150 Identities=15% Similarity=0.124 Sum_probs=96.6
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
|||++.+|.+++++|+++| ++|++.+|+.++...... .+......+.++.+|+.|.++++++++. ..+|
T Consensus 3 TGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD 77 (308)
T PLN00015 3 TGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAK-----SAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD 77 (308)
T ss_pred eCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-----HhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence 7999999999999999999 999999997654321110 1111124678889999999998887653 2689
Q ss_pred EEEeccCCCcc----------c---------------hHHHHHhCC--C--CCcEEEEecceecccC-----CC-C----
Q 029198 75 VVYDINGREAD----------E---------------VEPILDALP--N--LEQFIYCSSAGVYLKS-----DL-L---- 115 (197)
Q Consensus 75 ~vi~~a~~~~~----------~---------------~~~ll~~~~--~--~~~~v~~Ss~~vyg~~-----~~-~---- 115 (197)
++||+||.... . ++.++..++ + ..+||++||...+-.. .. .
T Consensus 78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~ 157 (308)
T PLN00015 78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD 157 (308)
T ss_pred EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence 99999986311 0 233455554 3 4699999996543110 00 0
Q ss_pred ---------------CCCCCCCCCCCCcc-hhhhhHHHHH----hh----cCCcEEEEccceeeC
Q 029198 116 ---------------PHCETDTVDPKSRH-KGKLNTESVL----ES----KGVNWTSLRPVYIYG 156 (197)
Q Consensus 116 ---------------~~~e~~~~~~~~~~-~~k~~~e~~~----~~----~~~~~~i~r~~~i~g 156 (197)
+..+ ....+...| .+|.+.+.+. ++ .++.++.++||++..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~-~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 221 (308)
T PLN00015 158 LRGLAGGLNGLNSSAMIDG-GEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIAT 221 (308)
T ss_pred hhhhhcccCCccchhhccc-cCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence 0000 011122236 8898855432 21 479999999999953
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.9e-11 Score=90.99 Aligned_cols=132 Identities=16% Similarity=0.163 Sum_probs=89.7
Q ss_pred HHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc--CccEEEeccCCCcc---
Q 029198 11 LSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYDINGREAD--- 85 (197)
Q Consensus 11 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~--~~d~vi~~a~~~~~--- 85 (197)
++++|+++|++|++++|++++. ....++.+|+.|.+++.++++.. ++|+|||+||....
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~----------------~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~ 64 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGM----------------TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPV 64 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchh----------------hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCH
Confidence 4788999999999999986552 11346789999999999888743 69999999986321
Q ss_pred ---------ch----HHHHHhCCCCCcEEEEecceecccCCCCCCCCC----------------CCCCCCCcc-hhhhhH
Q 029198 86 ---------EV----EPILDALPNLEQFIYCSSAGVYLKSDLLPHCET----------------DTVDPKSRH-KGKLNT 135 (197)
Q Consensus 86 ---------~~----~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~----------------~~~~~~~~~-~~k~~~ 135 (197)
++ +.++..++...+||++||...|+.....+..+. .+..+...| .+|...
T Consensus 65 ~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~ 144 (241)
T PRK12428 65 ELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEAL 144 (241)
T ss_pred HHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHH
Confidence 12 223333333369999999888753221111110 112223457 899988
Q ss_pred HHHH--------hhcCCcEEEEccceeeCCC
Q 029198 136 ESVL--------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 136 e~~~--------~~~~~~~~i~r~~~i~g~~ 158 (197)
+.+. ...|++++.++||++.++.
T Consensus 145 ~~~~~~la~~e~~~~girvn~v~PG~v~T~~ 175 (241)
T PRK12428 145 ILWTMRQAQPWFGARGIRVNCVAPGPVFTPI 175 (241)
T ss_pred HHHHHHHHHHhhhccCeEEEEeecCCccCcc
Confidence 7653 2358999999999998874
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.4e-11 Score=100.98 Aligned_cols=138 Identities=20% Similarity=0.243 Sum_probs=96.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh--ccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|+||.+++++|+++|++|++++|+.+...... ..+.. ....+..+.+|++|.+++.++++.. ++
T Consensus 420 TGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~-----~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~i 494 (676)
T TIGR02632 420 TGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVA-----AEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGV 494 (676)
T ss_pred eCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 799999999999999999999999999865422110 01110 1135778899999999998887643 69
Q ss_pred cEEEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEeccee-cccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGV-YLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~ 125 (197)
|+|||+||..... .+.++..++ + ..++|++||... ++.. .
T Consensus 495 DilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~------------~ 562 (676)
T TIGR02632 495 DIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK------------N 562 (676)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC------------C
Confidence 9999999864211 112334443 2 357999999553 3211 1
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceee
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIY 155 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~ 155 (197)
...| .+|...+.+.+ ..+++++.++|+.++
T Consensus 563 ~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 563 ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL 600 (676)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence 2356 89999888764 257999999999987
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.7e-11 Score=90.29 Aligned_cols=141 Identities=11% Similarity=0.080 Sum_probs=96.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhcc-CccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~ 78 (197)
|||+|.+|.++++.|++.|++|++++|++++..... ..+.. ...++.++.+|+.|++++.++++.. .+|.+||
T Consensus 13 tG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~ 87 (259)
T PRK06125 13 TGASKGIGAAAAEAFAAEGCHLHLVARDADALEALA-----ADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILVN 87 (259)
T ss_pred eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence 699999999999999999999999999865432110 01111 1245788999999999998887643 6999999
Q ss_pred ccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hh
Q 029198 79 INGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG 131 (197)
Q Consensus 79 ~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~ 131 (197)
++|..... ++.++..++ +..++|++||..... +......| .+
T Consensus 88 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~~y~as 156 (259)
T PRK06125 88 NAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN-----------PDADYICGSAG 156 (259)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC-----------CCCCchHhHHH
Confidence 99863211 223444444 345799998853310 01112235 67
Q ss_pred hhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 132 KLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 132 k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
|...+.+.+ ..+++++.+.||.+..+
T Consensus 157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 189 (259)
T PRK06125 157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATD 189 (259)
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence 888776553 35899999999998766
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.5e-11 Score=89.71 Aligned_cols=146 Identities=12% Similarity=0.042 Sum_probs=96.3
Q ss_pred CCccc--chHHHHHHHHHHCCCeEEEEecCCCCccC-CCCC-----CCchhhhhccCceEEEeecCCCHHHHHhhhhcc-
Q 029198 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPG-----ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK- 71 (197)
Q Consensus 1 tGatG--~vG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~- 71 (197)
|||+| .+|.+++++|+++|++|++..|....... .... ....++.+....+.++.+|+.|.+++.++++..
T Consensus 12 tGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~~~ 91 (256)
T PRK12859 12 TGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELLNKVT 91 (256)
T ss_pred ECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 79985 89999999999999999998654221100 0000 001112222346888999999999998887532
Q ss_pred ----CccEEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCC
Q 029198 72 ----GFDVVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD 121 (197)
Q Consensus 72 ----~~d~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~ 121 (197)
.+|++||+++..... .+.++..++ +..+||++||.....
T Consensus 92 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------- 160 (256)
T PRK12859 92 EQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG----------- 160 (256)
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC-----------
Confidence 489999999863211 223445554 346999999965431
Q ss_pred CCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
+..+...| .+|...+.+.+ ..+++++.++||++-.+
T Consensus 161 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~ 204 (256)
T PRK12859 161 PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTG 204 (256)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCC
Confidence 11122346 88988887643 36899999999998765
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.5e-11 Score=88.04 Aligned_cols=138 Identities=12% Similarity=0.063 Sum_probs=94.8
Q ss_pred CCcc--cchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGat--G~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+ +.||.+++++|+++|++|++.+|+.+. ...+. ++. ...+.++.+|+.|+++++++++. -++
T Consensus 13 tGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~-~~~~~-----~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 13 MGVANKRSIAWGCAQAIKDQGATVIYTYQNDRM-KKSLQ-----KLV--DEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred eCCCCCCchHHHHHHHHHHCCCEEEEecCchHH-HHHHH-----hhc--cCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 7998 799999999999999999999987321 11111 000 13578899999999988877653 269
Q ss_pred cEEEeccCCCcc----------c------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD----------E------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~----------~------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|++||+||.... . ++.++..++...++|++||....... ..
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~-----------~~ 153 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAI-----------PN 153 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccC-----------Cc
Confidence 999999986321 0 22234444433689999985532110 01
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
...| .+|...+.+.+ ..|++++.+.||.+-.+
T Consensus 154 ~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~ 193 (252)
T PRK06079 154 YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTL 193 (252)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccc
Confidence 2346 88999887653 36899999999999776
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=7e-11 Score=90.99 Aligned_cols=138 Identities=16% Similarity=0.126 Sum_probs=92.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc----cCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~----~~~d~v 76 (197)
|||+|+||.+++++|+++|++|++.++......... ..++.....++.++.+|+.|.+++.++++. -++|+|
T Consensus 18 TGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~----~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~l 93 (306)
T PRK07792 18 TGAAAGLGRAEALGLARLGATVVVNDVASALDASDV----LDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDIV 93 (306)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHH----HHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 799999999999999999999999988643211110 011222235688999999999988887763 269999
Q ss_pred EeccCCCcc--------------------chHHHHHh----CC-C--------CCcEEEEecceecccCCCCCCCCCCCC
Q 029198 77 YDINGREAD--------------------EVEPILDA----LP-N--------LEQFIYCSSAGVYLKSDLLPHCETDTV 123 (197)
Q Consensus 77 i~~a~~~~~--------------------~~~~ll~~----~~-~--------~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 123 (197)
||+||.... ++..++++ ++ . ..++|++||...+....
T Consensus 94 i~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 163 (306)
T PRK07792 94 VNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV---------- 163 (306)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC----------
Confidence 999986421 11122222 21 1 24899999865432111
Q ss_pred CCCCcc-hhhhhHHHHHh-------hcCCcEEEEccce
Q 029198 124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVY 153 (197)
Q Consensus 124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~ 153 (197)
....| .+|...+.+.+ ..|+++..+.|+.
T Consensus 164 -~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~ 200 (306)
T PRK07792 164 -GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA 200 (306)
T ss_pred -CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC
Confidence 12246 88998887652 3689999999973
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.2e-10 Score=88.32 Aligned_cols=151 Identities=15% Similarity=0.091 Sum_probs=94.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc----cCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~----~~~d~v 76 (197)
||| |+||.+++++|. +|++|++++|++++..... .++.....++.++.+|+.|.+++.++++. -++|++
T Consensus 8 tGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 8 IGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAA-----KTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred ECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 576 799999999996 8999999999765422111 11111224678899999999999888763 269999
Q ss_pred EeccCCCcc-------------ch----HHHHHhCCCCCcEEEEecceecccCC--C------CCCCCCC----C---C-
Q 029198 77 YDINGREAD-------------EV----EPILDALPNLEQFIYCSSAGVYLKSD--L------LPHCETD----T---V- 123 (197)
Q Consensus 77 i~~a~~~~~-------------~~----~~ll~~~~~~~~~v~~Ss~~vyg~~~--~------~~~~e~~----~---~- 123 (197)
||+||.... ++ +.++..++...++|++||........ . ......+ + .
T Consensus 81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (275)
T PRK06940 81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPD 160 (275)
T ss_pred EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccccc
Confidence 999986421 11 22233333224677888754321110 0 0000000 0 0
Q ss_pred ---CCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 124 ---DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 124 ---~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+...| .+|...+.+.+ ..+++++.+.||++..+.
T Consensus 161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~ 206 (275)
T PRK06940 161 AIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPL 206 (275)
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCcc
Confidence 122346 89999776543 368999999999998763
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.8e-10 Score=83.19 Aligned_cols=123 Identities=15% Similarity=0.124 Sum_probs=87.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||+|.+|.+++++|+++ ++|++++|++. .+.+|+.|+++++++++.. ++|+|||+
T Consensus 6 tGas~giG~~la~~l~~~-~~vi~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ 62 (199)
T PRK07578 6 IGASGTIGRAVVAELSKR-HEVITAGRSSG----------------------DVQVDITDPASIRALFEKVGKVDAVVSA 62 (199)
T ss_pred EcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence 799999999999999999 99999998642 2578999999999888754 79999999
Q ss_pred cCCCccc--------------------hHHHHHhC----CCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhh
Q 029198 80 NGREADE--------------------VEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN 134 (197)
Q Consensus 80 a~~~~~~--------------------~~~ll~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~ 134 (197)
+|..... ..++.+++ ++...++++||...... ......| .+|..
T Consensus 63 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~-----------~~~~~~Y~~sK~a 131 (199)
T PRK07578 63 AGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEP-----------IPGGASAATVNGA 131 (199)
T ss_pred CCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCC-----------CCCchHHHHHHHH
Confidence 9863211 11233332 23457888887553210 1112345 78888
Q ss_pred HHHHHh------hcCCcEEEEccceeeCC
Q 029198 135 TESVLE------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 135 ~e~~~~------~~~~~~~i~r~~~i~g~ 157 (197)
.+.+.+ ..+++++.++||++-.+
T Consensus 132 ~~~~~~~la~e~~~gi~v~~i~Pg~v~t~ 160 (199)
T PRK07578 132 LEGFVKAAALELPRGIRINVVSPTVLTES 160 (199)
T ss_pred HHHHHHHHHHHccCCeEEEEEcCCcccCc
Confidence 776543 35899999999988654
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=9.1e-11 Score=86.58 Aligned_cols=139 Identities=7% Similarity=0.061 Sum_probs=96.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----c-Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----K-GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~-~~d 74 (197)
|||++.+|.+++++|+++|++|++++|++++..... .++.+...++..+.+|+.|++++++++++ - ++|
T Consensus 11 tGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~-----~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD 85 (227)
T PRK08862 11 TSAGSVLGRTISCHFARLGATLILCDQDQSALKDTY-----EQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPD 85 (227)
T ss_pred ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCC
Confidence 799999999999999999999999999876532211 11122234577888999999999877653 2 699
Q ss_pred EEEeccCCCc-c---------c---------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREA-D---------E---------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 75 ~vi~~a~~~~-~---------~---------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 126 (197)
++||++|... . . .+.++..++ + ...+|++||...+. +.
T Consensus 86 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--------------~~ 151 (227)
T PRK08862 86 VLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ--------------DL 151 (227)
T ss_pred EEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC--------------Cc
Confidence 9999997321 0 0 112233343 2 35899999853220 12
Q ss_pred Ccc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
..| .+|...+.+.+ ..++++..+.||++-.+.
T Consensus 152 ~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~ 191 (227)
T PRK08862 152 TGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG 191 (227)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence 235 88888877653 468999999999988773
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.3e-10 Score=87.41 Aligned_cols=143 Identities=12% Similarity=0.051 Sum_probs=95.0
Q ss_pred CCcc--cchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGat--G~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+ +.||.+++++|++.|++|++..|+.+.... .. ...++.+....+.++.+|+.|++++.++++.. ++
T Consensus 12 tGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 88 (258)
T PRK07370 12 TGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRF--EK-KVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWGKL 88 (258)
T ss_pred eCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchH--HH-HHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcCCC
Confidence 6875 799999999999999999988775432110 00 00111111234678899999999998877642 69
Q ss_pred cEEEeccCCCc-----cc-----------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREA-----DE-----------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~-----~~-----------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|++||++|... .. ++.++..++...+||++||...... ...
T Consensus 89 D~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-----------~~~ 157 (258)
T PRK07370 89 DILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRA-----------IPN 157 (258)
T ss_pred CEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccC-----------Ccc
Confidence 99999998531 00 2334444443368999998543210 011
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
...| .+|...+.+.+ ..++.++.+.||++-.+
T Consensus 158 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~ 197 (258)
T PRK07370 158 YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTL 197 (258)
T ss_pred cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCc
Confidence 2346 88999887653 36899999999999775
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.3e-11 Score=88.81 Aligned_cols=143 Identities=15% Similarity=0.090 Sum_probs=88.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHH----Hhhhhc-----
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFV----KSSLSA----- 70 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l----~~~~~~----- 70 (197)
|||+|+||.+++++|+++|++|+++.|+.++....+. .++.. ....+.++.+|+.|.+++ .++++.
T Consensus 7 TGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~ 82 (267)
T TIGR02685 7 TGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLA----AELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF 82 (267)
T ss_pred eCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHH----HHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence 7999999999999999999999998775432211110 11111 123566789999998755 333321
Q ss_pred cCccEEEeccCCCcc-------c------------------------h----HHHHHhCC-C-------CCcEEEEecce
Q 029198 71 KGFDVVYDINGREAD-------E------------------------V----EPILDALP-N-------LEQFIYCSSAG 107 (197)
Q Consensus 71 ~~~d~vi~~a~~~~~-------~------------------------~----~~ll~~~~-~-------~~~~v~~Ss~~ 107 (197)
-++|+|||+||.... . . +.++..++ . ...++++||..
T Consensus 83 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~ 162 (267)
T TIGR02685 83 GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAM 162 (267)
T ss_pred CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhh
Confidence 269999999985310 0 0 11122221 1 12466666643
Q ss_pred ecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 108 vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
... +..+...| .+|...+.+.+ ..|++++.++||++..+.
T Consensus 163 ~~~-----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~ 210 (267)
T TIGR02685 163 TDQ-----------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPD 210 (267)
T ss_pred ccC-----------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcc
Confidence 311 11123356 89999988753 368999999999987653
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.2e-10 Score=95.89 Aligned_cols=138 Identities=15% Similarity=0.179 Sum_probs=97.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||++.+|.+++++|+++|++|++++|+.+...... .+...++.++.+|+.|++++.++++. -++|+
T Consensus 11 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 11 TGAAGGIGRAACQRFARAGDQVVVADRNVERARERA--------DSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999866532111 11134677899999999998888764 26999
Q ss_pred EEeccCCCcc--------------------------chHHHHHhCC--CC-CcEEEEecceecccCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD--------------------------EVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 76 vi~~a~~~~~--------------------------~~~~ll~~~~--~~-~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 126 (197)
+||++|.... -++.++..++ +. .++|++||........ ..
T Consensus 83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~-----------~~ 151 (520)
T PRK06484 83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALP-----------KR 151 (520)
T ss_pred EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCC-----------CC
Confidence 9999986210 0223444443 23 3899999865432111 12
Q ss_pred Ccc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
..| .+|...+.+.+ ..+++++.++||.+-.+
T Consensus 152 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~ 190 (520)
T PRK06484 152 TAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQ 190 (520)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCch
Confidence 345 88998887653 35899999999988665
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.8e-10 Score=80.58 Aligned_cols=167 Identities=17% Similarity=0.141 Sum_probs=113.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+..||++++..|.+.|++|...+++.......... +....+...+.+|.+++++++..++. -.|++
T Consensus 20 tGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~------L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 20 TGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGD------LGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred ecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhh------cCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 69999999999999999999999999987754322111 11124678899999999888775542 27999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC----CCCcEEEEecce-ecccCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREADE------------------------VEPILDALP----NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~----~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~ 126 (197)
++||||.+.+. ++..++++- ..-.||++||+- -.|+..+ .
T Consensus 94 lVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQ-----------t 162 (256)
T KOG1200|consen 94 LVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQ-----------T 162 (256)
T ss_pred EEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccc-----------h
Confidence 99999987443 233344422 233899999932 3332222 1
Q ss_pred Ccchhhhh-------HHHHHhhcCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCce
Q 029198 127 SRHKGKLN-------TESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ 185 (197)
Q Consensus 127 ~~~~~k~~-------~e~~~~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 185 (197)
+|..+|.. +.+.+.+.++++..+-||+|-.|.. ..+.+..++.+...-|+..+|+.+.
T Consensus 163 nYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT-~~mp~~v~~ki~~~iPmgr~G~~Ee 227 (256)
T KOG1200|consen 163 NYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMT-EAMPPKVLDKILGMIPMGRLGEAEE 227 (256)
T ss_pred hhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhh-hhcCHHHHHHHHccCCccccCCHHH
Confidence 11133322 2233455689999999999999842 4566777888888877777776544
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.5e-10 Score=88.40 Aligned_cols=140 Identities=18% Similarity=0.135 Sum_probs=91.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCc-----cCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-----AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----- 70 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~----- 70 (197)
|||++.||.+++++|++.|++|++++|+.... ...+. ....++.....++.++.+|+.|.+++.++++.
T Consensus 12 TGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (286)
T PRK07791 12 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQ-AVVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETF 90 (286)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHH-HHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHhc
Confidence 79999999999999999999999998865110 00000 00011112234678899999999988877653
Q ss_pred cCccEEEeccCCCccc------------------------hHHHHHhCC-C-------CCcEEEEecceecccCCCCCCC
Q 029198 71 KGFDVVYDINGREADE------------------------VEPILDALP-N-------LEQFIYCSSAGVYLKSDLLPHC 118 (197)
Q Consensus 71 ~~~d~vi~~a~~~~~~------------------------~~~ll~~~~-~-------~~~~v~~Ss~~vyg~~~~~~~~ 118 (197)
-++|++||+||..... ++.++..++ . ..+||++||........
T Consensus 91 g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~----- 165 (286)
T PRK07791 91 GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSV----- 165 (286)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCC-----
Confidence 2689999999863211 222333332 1 24899999865421110
Q ss_pred CCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccc
Q 029198 119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPV 152 (197)
Q Consensus 119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~ 152 (197)
....| .+|...+.+.+ ..+++++.+.||
T Consensus 166 ------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg 201 (286)
T PRK07791 166 ------GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA 201 (286)
T ss_pred ------CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC
Confidence 12346 88988877653 368999999998
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.2e-10 Score=86.71 Aligned_cols=140 Identities=16% Similarity=0.147 Sum_probs=93.3
Q ss_pred CCccc--chHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG--~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||++ .||.+++++|++.|++|++.+|+...... . .++.+.......+.+|+.|+++++++++. -.+
T Consensus 13 TGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~-----~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (271)
T PRK06505 13 MGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-V-----KPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKL 86 (271)
T ss_pred eCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-H-----HHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 79986 99999999999999999999886432110 0 01111112235688999999998887753 269
Q ss_pred cEEEeccCCCcc-----c-----------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD-----E-----------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~-----~-----------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|++||+||.... . ++.++..++...++|++||....... ..
T Consensus 87 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~-----------~~ 155 (271)
T PRK06505 87 DFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVM-----------PN 155 (271)
T ss_pred CEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccC-----------Cc
Confidence 999999986320 0 12233334422589999986432110 01
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
...| .+|...+.+.+ ..|++++.+.||++-.+
T Consensus 156 ~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~ 195 (271)
T PRK06505 156 YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTL 195 (271)
T ss_pred cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccc
Confidence 2246 88998887653 36899999999999776
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.4e-10 Score=86.59 Aligned_cols=140 Identities=18% Similarity=0.204 Sum_probs=95.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhcc-CceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
|||++.+|.+++++|+ +|++|++++|++++..... .++.+.. ..+.++.+|+.|+++++++++. -++|
T Consensus 6 tGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 6 LGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLA-----SDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred EeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH-----HHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 6999999999999998 5999999999865532111 1122222 2478899999999988887653 2699
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
++||++|..... ++.++..+. + ..++|++||...+-.. ....
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~-----------~~~~ 148 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR-----------RANY 148 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC-----------cCCc
Confidence 999999863210 112233343 2 3689999996543110 0123
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.| .+|...+.+.+ ..++.++.+.||.+..+
T Consensus 149 ~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~ 186 (246)
T PRK05599 149 VYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGS 186 (246)
T ss_pred chhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccch
Confidence 46 88888776542 36899999999999775
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.5e-10 Score=82.33 Aligned_cols=71 Identities=18% Similarity=0.193 Sum_probs=56.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+|++|.+++++|+++|++|++++|++....... . ......+.+|+.|.+++.+.+. ++|++||+|
T Consensus 20 TGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~--------~--~~~~~~~~~D~~~~~~~~~~~~--~iDilVnnA 87 (245)
T PRK12367 20 TGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN--------D--ESPNEWIKWECGKEESLDKQLA--SLDVLILNH 87 (245)
T ss_pred EcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh--------c--cCCCeEEEeeCCCHHHHHHhcC--CCCEEEECC
Confidence 799999999999999999999999999763211110 0 1122567899999999998887 899999999
Q ss_pred CCC
Q 029198 81 GRE 83 (197)
Q Consensus 81 ~~~ 83 (197)
|..
T Consensus 88 G~~ 90 (245)
T PRK12367 88 GIN 90 (245)
T ss_pred ccC
Confidence 863
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.19 E-value=3e-10 Score=79.93 Aligned_cols=141 Identities=17% Similarity=0.168 Sum_probs=94.6
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
|||+|++|.+++++|+++|+ .|+++.|++........ ....+.+...++.++.+|+.+++++.++++. -.+|
T Consensus 6 ~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 83 (180)
T smart00822 6 TGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAE--LLAELEALGAEVTVVACDVADRAALAAALAAIPARLGPLR 83 (180)
T ss_pred EcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHH--HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCee
Confidence 69999999999999999996 68888887554221100 0011112234678899999999888877653 2479
Q ss_pred EEEeccCCCc--------------------cchHHHHHhCC--CCCcEEEEeccee-cccCCCCCCCCCCCCCCCCcc-h
Q 029198 75 VVYDINGREA--------------------DEVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 75 ~vi~~a~~~~--------------------~~~~~ll~~~~--~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
.|||+++... .+...++++++ +.++++++||... ++.. ....| .
T Consensus 84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~------------~~~~y~~ 151 (180)
T smart00822 84 GVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNP------------GQANYAA 151 (180)
T ss_pred EEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCC------------CchhhHH
Confidence 9999998531 12344556665 5678999998553 3221 12235 7
Q ss_pred hhhhHHHHH---hhcCCcEEEEccceee
Q 029198 131 GKLNTESVL---ESKGVNWTSLRPVYIY 155 (197)
Q Consensus 131 ~k~~~e~~~---~~~~~~~~i~r~~~i~ 155 (197)
+|...+.+. +..+++++.+.||.+-
T Consensus 152 sk~~~~~~~~~~~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 152 ANAFLDALAAHRRARGLPATSINWGAWA 179 (180)
T ss_pred HHHHHHHHHHHHHhcCCceEEEeecccc
Confidence 788887765 4578899999988653
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.6e-10 Score=86.78 Aligned_cols=141 Identities=16% Similarity=0.147 Sum_probs=95.1
Q ss_pred CCcccchHHHHHHHHHH----CCCeEEEEecCCCCccCCCCCCCchhhhh--ccCceEEEeecCCCHHHHHhhhhcc---
Q 029198 1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK--- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~--- 71 (197)
|||++.||.+++++|++ .|++|++++|+++...... .++.. ....+.++.+|+.|+++++++++..
T Consensus 6 tGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~ 80 (256)
T TIGR01500 6 TGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLK-----AEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL 80 (256)
T ss_pred ecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHH-----HHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence 79999999999999997 7999999999865432111 11111 1236888999999999888776421
Q ss_pred ------CccEEEeccCCCcc---------c------------------hHHHHHhCC-C---CCcEEEEecceecccCCC
Q 029198 72 ------GFDVVYDINGREAD---------E------------------VEPILDALP-N---LEQFIYCSSAGVYLKSDL 114 (197)
Q Consensus 72 ------~~d~vi~~a~~~~~---------~------------------~~~ll~~~~-~---~~~~v~~Ss~~vyg~~~~ 114 (197)
+.|+|||+||.... . ++.++..++ . ..++|++||...+...
T Consensus 81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~-- 158 (256)
T TIGR01500 81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPF-- 158 (256)
T ss_pred cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCC--
Confidence 23689999985210 0 223444444 2 2579999996543211
Q ss_pred CCCCCCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 115 LPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 115 ~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.....| .+|...+.+.+ ..++.++.+.||++-.+
T Consensus 159 ---------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~ 200 (256)
T TIGR01500 159 ---------KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD 200 (256)
T ss_pred ---------CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence 112346 88998887653 35799999999998665
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.3e-10 Score=85.35 Aligned_cols=140 Identities=12% Similarity=0.089 Sum_probs=92.4
Q ss_pred CCc--ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGa--tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
||| ++.||.+++++|+++|++|++..|.... ...+ .++.........+.+|+.|++++.++++. -++
T Consensus 12 TGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 85 (261)
T PRK08690 12 TGMISERSIAYGIAKACREQGAELAFTYVVDKL-EERV-----RKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGL 85 (261)
T ss_pred ECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHH-HHHH-----HHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 686 6799999999999999999998775321 1111 01111112345789999999999888753 269
Q ss_pred cEEEeccCCCcc---------c--------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD---------E--------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV 123 (197)
Q Consensus 74 d~vi~~a~~~~~---------~--------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 123 (197)
|++||+||.... . ++.++..++ ...++|++||.......
T Consensus 86 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~----------- 154 (261)
T PRK08690 86 DGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAI----------- 154 (261)
T ss_pred cEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCC-----------
Confidence 999999987421 0 111223333 33579999986543110
Q ss_pred CCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.....| .+|...+.+.+ ..|++++.+.||++-.+
T Consensus 155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~ 196 (261)
T PRK08690 155 PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTL 196 (261)
T ss_pred CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccch
Confidence 112346 88988877643 46899999999999776
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.9e-10 Score=84.20 Aligned_cols=140 Identities=15% Similarity=0.104 Sum_probs=94.0
Q ss_pred CCcc--cchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhh-hc-cCceEEEeecCCCHHHHHhhhhc-----c
Q 029198 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EF-SSKILHLKGDRKDYDFVKSSLSA-----K 71 (197)
Q Consensus 1 tGat--G~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~d~~~~~~l~~~~~~-----~ 71 (197)
|||+ +.||.+++++|+++|++|++.+|+.... ..+. ++. +. ..++.++.+|+.|++++.++++. -
T Consensus 13 tGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~-~~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 86 (257)
T PRK08594 13 MGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE-KEVR-----ELADTLEGQESLLLPCDVTSDEEITACFETIKEEVG 86 (257)
T ss_pred ECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch-HHHH-----HHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCC
Confidence 6887 8999999999999999999998763221 1110 111 11 24678899999999988877753 2
Q ss_pred CccEEEeccCCCc-----cc-----------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCC
Q 029198 72 GFDVVYDINGREA-----DE-----------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTV 123 (197)
Q Consensus 72 ~~d~vi~~a~~~~-----~~-----------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 123 (197)
++|++||+++... .. ++.++..++...+||++||....-. .
T Consensus 87 ~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-----------~ 155 (257)
T PRK08594 87 VIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERV-----------V 155 (257)
T ss_pred CccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccC-----------C
Confidence 5999999998531 00 1123333333358999998553210 0
Q ss_pred CCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.....| .+|...+.+.+ ..+++++.+.||.+-.+
T Consensus 156 ~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 197 (257)
T PRK08594 156 QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTL 197 (257)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCH
Confidence 112346 88999887653 36899999999998765
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.2e-10 Score=86.09 Aligned_cols=148 Identities=14% Similarity=0.073 Sum_probs=96.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCC--CC---CchhhhhccCceEEEeecCCCHHHHHhhhhcc----
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP--GE---SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~---- 71 (197)
|||++.||.+++++|++.|++|++++|+......... .. ....+......+.++.+|+.|+++++++++..
T Consensus 14 TGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 93 (305)
T PRK08303 14 AGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERIDREQ 93 (305)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 7999999999999999999999999998543110000 00 00111122235778999999999998877642
Q ss_pred -CccEEEecc-CCC----c-cc-----------------------hHHHHHhCC--CCCcEEEEeccee-cccCCCCCCC
Q 029198 72 -GFDVVYDIN-GRE----A-DE-----------------------VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHC 118 (197)
Q Consensus 72 -~~d~vi~~a-~~~----~-~~-----------------------~~~ll~~~~--~~~~~v~~Ss~~v-yg~~~~~~~~ 118 (197)
++|++||++ +.. . .. ++.++..++ +..+||++||... +....
T Consensus 94 g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~----- 168 (305)
T PRK08303 94 GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATH----- 168 (305)
T ss_pred CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcC-----
Confidence 699999998 631 0 00 222444444 3468999998543 21100
Q ss_pred CCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
......| .+|.....+.+ ..++++..+.||++-.+
T Consensus 169 ----~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~ 211 (305)
T PRK08303 169 ----YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE 211 (305)
T ss_pred ----CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence 0012236 88988877653 36899999999988655
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.4e-10 Score=88.89 Aligned_cols=154 Identities=20% Similarity=0.096 Sum_probs=103.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
||||..||.+++++|+++|.+|+...|+.+......... ........+.++.+|+.+..+++++.+. ...|+
T Consensus 41 TGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i---~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldv 117 (314)
T KOG1208|consen 41 TGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQI---QKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDV 117 (314)
T ss_pred ECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH---HhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccE
Confidence 799999999999999999999999999975432211100 0011235688899999999999887653 37999
Q ss_pred EEeccCCCcc-------c---------------hHHHHHhCC--CCCcEEEEecceeccc--CCCCCCCCCCC-CCCCCc
Q 029198 76 VYDINGREAD-------E---------------VEPILDALP--NLEQFIYCSSAGVYLK--SDLLPHCETDT-VDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~-------~---------------~~~ll~~~~--~~~~~v~~Ss~~vyg~--~~~~~~~e~~~-~~~~~~ 128 (197)
+|++||.... + +..+++.++ ...|||++||..- +. .......+... ......
T Consensus 118 LInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~~~~~~~ 196 (314)
T KOG1208|consen 118 LINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKLYSSDAA 196 (314)
T ss_pred EEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccCccchhH
Confidence 9999997421 1 456777777 3389999999654 21 11111111111 111112
Q ss_pred c-hhhhhHHHHH----hh--cCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVL----ES--KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~----~~--~~~~~~i~r~~~i~g~~ 158 (197)
| .+|.+...+. ++ .|+.+..+.||.+..+.
T Consensus 197 Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~ 233 (314)
T KOG1208|consen 197 YALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG 233 (314)
T ss_pred HHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence 5 7787765543 22 27999999999998884
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.4e-10 Score=85.88 Aligned_cols=140 Identities=15% Similarity=0.096 Sum_probs=93.5
Q ss_pred CCcc--cchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGat--G~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+ +.||.++++.|++.|++|++.+|+.+. ...+. ....+.... ..+.+|+.|.+++.++++. -++
T Consensus 11 tGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~-~~~~~----~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~i 84 (274)
T PRK08415 11 VGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRVE----PIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLGKI 84 (274)
T ss_pred ECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH-HHHHH----HHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 6887 799999999999999999999987421 00000 000111123 5788999999998887753 268
Q ss_pred cEEEeccCCCcc----c------------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD----E------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~----~------------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|++||+||.... . ++.++..++...+||++||...... ...
T Consensus 85 DilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~-----------~~~ 153 (274)
T PRK08415 85 DFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKY-----------VPH 153 (274)
T ss_pred CEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccC-----------CCc
Confidence 999999986310 0 2334555553368999998543210 001
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
...| .+|...+.+.+ ..|+++..+.||++..+
T Consensus 154 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (274)
T PRK08415 154 YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTL 193 (274)
T ss_pred chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence 2236 88988877653 36899999999999765
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.1e-10 Score=84.15 Aligned_cols=140 Identities=14% Similarity=0.069 Sum_probs=93.4
Q ss_pred CCcc--cchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGat--G~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+ +.||.+++++|++.|++|++.+|+++... .+ .++.+..+...++.+|+.|.+++.++++. -++
T Consensus 16 tGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~l 89 (258)
T PRK07533 16 VGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YV-----EPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRL 89 (258)
T ss_pred ECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HH-----HHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCC
Confidence 6888 49999999999999999999999753211 00 01111112356788999999998887653 268
Q ss_pred cEEEeccCCCcc----------c------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD----------E------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~----------~------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|++||+||.... . ++.++..++...++|++||...... ...
T Consensus 90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~-----------~~~ 158 (258)
T PRK07533 90 DFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKV-----------VEN 158 (258)
T ss_pred CEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccC-----------Ccc
Confidence 999999986321 0 2334444443357999988543210 001
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
...| .+|...+.+.+ ..++++..+.||++-.+
T Consensus 159 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~ 198 (258)
T PRK07533 159 YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTR 198 (258)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCCh
Confidence 2235 88888877643 36899999999998765
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.17 E-value=2e-10 Score=89.85 Aligned_cols=145 Identities=19% Similarity=0.222 Sum_probs=95.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHH-Hhhhhcc--CccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLSAK--GFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l-~~~~~~~--~~d~vi 77 (197)
+||||.+|+-+++.|+++|+.|.++.|+.++....+.. .........+..+...+.+. ..+.... ...+++
T Consensus 85 vGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~------~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~ 158 (411)
T KOG1203|consen 85 VGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGV------FFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVIVI 158 (411)
T ss_pred ecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcc------cccccccceeeeccccccchhhhhhhhccccceeEE
Confidence 59999999999999999999999999998886655430 00112344444444433332 3333311 244555
Q ss_pred eccCCC-------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCC-CCCcchhhhhHHHHHhh
Q 029198 78 DINGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-PKSRHKGKLNTESVLES 141 (197)
Q Consensus 78 ~~a~~~-------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~-~~~~~~~k~~~e~~~~~ 141 (197)
-+++.. ..+++|++++|+ +++|++++|+++.--.... -.... ....+.+|..+|+++++
T Consensus 159 ~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~-----~~~~~~~~~~~~~k~~~e~~~~~ 233 (411)
T KOG1203|consen 159 KGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQP-----PNILLLNGLVLKAKLKAEKFLQD 233 (411)
T ss_pred ecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCC-----chhhhhhhhhhHHHHhHHHHHHh
Confidence 554431 124889999999 9999999988665211110 00000 01113789999999999
Q ss_pred cCCcEEEEccceeeC
Q 029198 142 KGVNWTSLRPVYIYG 156 (197)
Q Consensus 142 ~~~~~~i~r~~~i~g 156 (197)
.+++++|||++...-
T Consensus 234 Sgl~ytiIR~g~~~~ 248 (411)
T KOG1203|consen 234 SGLPYTIIRPGGLEQ 248 (411)
T ss_pred cCCCcEEEecccccc
Confidence 999999999998754
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.7e-10 Score=83.21 Aligned_cols=138 Identities=14% Similarity=0.167 Sum_probs=100.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||++.+|+.++.+++++|..++..+.+++...+.... ....+.+..+.+|+++.+++.+..++ -.+|+
T Consensus 44 TGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~------~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~I 117 (300)
T KOG1201|consen 44 TGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKE------IRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVDI 117 (300)
T ss_pred eCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHH------HHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCceE
Confidence 79999999999999999999999999988775433221 11113689999999999988877653 27999
Q ss_pred EEeccCCCcc------------------------chHHHHHhCC--CCCcEEEEeccee-cccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~------------------------~~~~ll~~~~--~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||.-.. .++.++..|. +..|+|.++|+.- .|.. ....
T Consensus 118 LVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~------------gl~~ 185 (300)
T KOG1201|consen 118 LVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPA------------GLAD 185 (300)
T ss_pred EEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCc------------cchh
Confidence 9999997311 1566777776 6789999999553 3221 1234
Q ss_pred c-hhhhhHHHHHh----------hcCCcEEEEccceeeC
Q 029198 129 H-KGKLNTESVLE----------SKGVNWTSLRPVYIYG 156 (197)
Q Consensus 129 ~-~~k~~~e~~~~----------~~~~~~~i~r~~~i~g 156 (197)
| .||.++.-+.+ ..+++.+.+.|+.+=.
T Consensus 186 YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~T 224 (300)
T KOG1201|consen 186 YCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINT 224 (300)
T ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccc
Confidence 5 78888765542 2468999999987753
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.1e-09 Score=79.55 Aligned_cols=137 Identities=16% Similarity=0.074 Sum_probs=91.2
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-cCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-~~~d~vi 77 (197)
|||+|+||.+++++|+++| +.|.+..|+.... .. ..++.++.+|+.+.++++++.+. .++|+||
T Consensus 6 tGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~~----------~~~~~~~~~Dls~~~~~~~~~~~~~~id~li 72 (235)
T PRK09009 6 VGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---FQ----------HDNVQWHALDVTDEAEIKQLSEQFTQLDWLI 72 (235)
T ss_pred ECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---cc----------cCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence 7999999999999999985 5666666644321 11 24688999999999988776543 2799999
Q ss_pred eccCCCcc------c------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 78 DINGREAD------E------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 78 ~~a~~~~~------~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|++|.... . ++.++..++ +..+++++||.. +.... + ...+
T Consensus 73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~----~--~~~~ 144 (235)
T PRK09009 73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISD----N--RLGG 144 (235)
T ss_pred ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--ccccc----C--CCCC
Confidence 99987421 0 223444454 346788888732 11100 0 0112
Q ss_pred CCcc-hhhhhHHHHHhh---------cCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLES---------KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~~---------~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+. .++.+..+.||++-.+.
T Consensus 145 ~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~ 187 (235)
T PRK09009 145 WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTAL 187 (235)
T ss_pred cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCC
Confidence 2345 888888876531 37889999999997763
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.7e-10 Score=84.18 Aligned_cols=140 Identities=12% Similarity=0.090 Sum_probs=91.8
Q ss_pred CCcc--cchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGat--G~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+ +.||.+++++|+++|++|++..|++.. ...+ ..+.+.......+.+|+.|+++++++++. -++
T Consensus 16 tGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 89 (272)
T PRK08159 16 LGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRV-----EPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKL 89 (272)
T ss_pred ECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHH-----HHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 6886 899999999999999999988875321 1100 01111112356789999999999887753 268
Q ss_pred cEEEeccCCCcc----------c------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD----------E------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~----------~------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|++||+||.... . ++.++..+++..++|++||...... ...
T Consensus 90 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~-----------~p~ 158 (272)
T PRK08159 90 DFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV-----------MPH 158 (272)
T ss_pred cEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccC-----------CCc
Confidence 999999986320 0 1222333443368999998543210 001
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
...| .+|...+.+.+ ..++++..+.||++..+
T Consensus 159 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 198 (272)
T PRK08159 159 YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTL 198 (272)
T ss_pred chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCH
Confidence 2235 88998877653 36899999999998654
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1e-09 Score=82.69 Aligned_cols=140 Identities=14% Similarity=0.120 Sum_probs=91.5
Q ss_pred CCccc--chHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG--~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||++ .||.++++.|++.|++|++.+|+.. ..... .++....+....+.+|+.|+++++++++. -++
T Consensus 12 TGas~~~GIG~aia~~la~~G~~vil~~r~~~-~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 85 (262)
T PRK07984 12 TGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRV-----EEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKF 85 (262)
T ss_pred eCCCCCccHHHHHHHHHHHCCCEEEEEecchh-HHHHH-----HHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCC
Confidence 68875 8999999999999999999888631 11100 01111123466788999999999887753 158
Q ss_pred cEEEeccCCCcc-----------c------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD-----------E------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 74 d~vi~~a~~~~~-----------~------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
|++||+||.... . ++.++..++...++|++||...... ..
T Consensus 86 D~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~-----------~~ 154 (262)
T PRK07984 86 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA-----------IP 154 (262)
T ss_pred CEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCC-----------CC
Confidence 999999985311 0 1112222222357999988653210 00
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
....| .+|...+.+.+ ..++++..+.||++-.+
T Consensus 155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~ 195 (262)
T PRK07984 155 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTL 195 (262)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccch
Confidence 12246 88999887653 35899999999998765
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.2e-10 Score=89.77 Aligned_cols=137 Identities=20% Similarity=0.196 Sum_probs=91.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|.+|.+++++|++.|++|+++++...... + ....+ .-+..++.+|+.|.+++.++++.. ++|+
T Consensus 216 tGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~--l-----~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 216 TGAARGIGAAIAEVLARDGAHVVCLDVPAAGEA--L-----AAVAN-RVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred ecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHH--H-----HHHHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 799999999999999999999999988532210 0 00000 013467889999999888876532 6899
Q ss_pred EEeccCCCccc--------------------hHHHHHhCC------CCCcEEEEecceec-ccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE--------------------VEPILDALP------NLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~--------------------~~~ll~~~~------~~~~~v~~Ss~~vy-g~~~~~~~~e~~~~~~~~~ 128 (197)
|||+++..... ..++.+++. ...+||++||...+ +.. ....
T Consensus 288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~------------~~~~ 355 (450)
T PRK08261 288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR------------GQTN 355 (450)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC------------CChH
Confidence 99999864211 122222221 33689999996543 221 1234
Q ss_pred c-hhhhhHHHHH-------hhcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+. +..++.++.+.||.+-.+
T Consensus 356 Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~ 392 (450)
T PRK08261 356 YAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQ 392 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcch
Confidence 5 8888666554 346899999999987543
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.4e-10 Score=80.99 Aligned_cols=178 Identities=17% Similarity=0.094 Sum_probs=120.7
Q ss_pred CCcccchHHHHHHHHHHC-CCe-EEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
||+-|.+|..++..|... |.+ |+..+-.++. ...+ ..-.++..|+.|...++++.-..++|.+||
T Consensus 50 TG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~------------~~GPyIy~DILD~K~L~eIVVn~RIdWL~H 116 (366)
T KOG2774|consen 50 TGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVT------------DVGPYIYLDILDQKSLEEIVVNKRIDWLVH 116 (366)
T ss_pred ecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhc------------ccCCchhhhhhccccHHHhhcccccceeee
Confidence 799999999999999877 654 4444433332 1111 245678889999999999988789999999
Q ss_pred ccCC---------------CccchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCC-CCCCCCcc-hhhhhHHHH--
Q 029198 79 INGR---------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-TVDPKSRH-KGKLNTESV-- 138 (197)
Q Consensus 79 ~a~~---------------~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~-~~~~~~~~-~~k~~~e~~-- 138 (197)
.++. ++.+..|+++.++ ..-++...|+++.||......-+.+. .-.|...| .+|..+|.+
T Consensus 117 fSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GE 196 (366)
T KOG2774|consen 117 FSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGE 196 (366)
T ss_pred HHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHH
Confidence 7543 4567899999988 45578889999999965332222222 23466777 899888764
Q ss_pred --HhhcCCcEEEEccceeeCCC-----CCCChHHHHHHHHHcCCCcccCCCCceeEEEEEE
Q 029198 139 --LESKGVNWTSLRPVYIYGPL-----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (197)
Q Consensus 139 --~~~~~~~~~i~r~~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 192 (197)
-.+.++++-.+|++.+.... ..+..+..|-.+..+|+.- .+-..+....+.|.
T Consensus 197 y~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~t-Cylrpdtrlpmmy~ 256 (366)
T KOG2774|consen 197 YFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHT-CYLRPDTRLPMMYD 256 (366)
T ss_pred HHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcc-cccCCCccCceeeh
Confidence 35789999999988887642 2233444555566666643 33333444455554
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.3e-09 Score=81.77 Aligned_cols=138 Identities=15% Similarity=0.133 Sum_probs=92.3
Q ss_pred CCc--ccchHHHHHHHHHHCCCeEEEEecCCC-CccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cC
Q 029198 1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKA-PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG 72 (197)
Q Consensus 1 tGa--tG~vG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~ 72 (197)
||| ++.||.+++++|+++|++|++.+|+.. +..+.+. .+....+.++.+|+.|+++++++++. -+
T Consensus 13 tGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~-------~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 13 TGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIA-------KRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred eCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHH-------HhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 688 899999999999999999999988642 1111100 11123577899999999998887653 26
Q ss_pred ccEEEeccCCCcc----------c------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 73 FDVVYDINGREAD----------E------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 73 ~d~vi~~a~~~~~----------~------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
+|++||+||.... . ++.++..++...+++++|+....+ ..
T Consensus 86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~------------~~ 153 (256)
T PRK07889 86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA------------WP 153 (256)
T ss_pred CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc------------CC
Confidence 9999999986421 0 122334444335788887532110 00
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
....| .+|...+.+.+ ..|++++.+.||++-.+
T Consensus 154 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 194 (256)
T PRK07889 154 AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTL 194 (256)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccCh
Confidence 12235 88888877653 46899999999999776
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.2e-09 Score=82.13 Aligned_cols=140 Identities=11% Similarity=0.032 Sum_probs=91.2
Q ss_pred CCccc--chHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG--~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||++ .||.++++.|+++|++|++.+|++.. .... .++.+......++.+|+.|++++.++++. -++
T Consensus 14 TGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~-~~~~-----~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 87 (260)
T PRK06603 14 TGIANNMSISWAIAQLAKKHGAELWFTYQSEVL-EKRV-----KPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSF 87 (260)
T ss_pred ECCCCCcchHHHHHHHHHHcCCEEEEEeCchHH-HHHH-----HHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence 78987 79999999999999999998886321 1111 01111112234578999999998887753 269
Q ss_pred cEEEeccCCCc---------c-c------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREA---------D-E------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~---------~-~------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|++||+++... + . ++.++..++...++|++||....... ..
T Consensus 88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~-----------~~ 156 (260)
T PRK06603 88 DFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVI-----------PN 156 (260)
T ss_pred cEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCC-----------Cc
Confidence 99999987531 0 0 11222333333589999985542100 01
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
...| .+|...+.+.+ ..++++..+.||.+-.+
T Consensus 157 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 196 (260)
T PRK06603 157 YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTL 196 (260)
T ss_pred ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcch
Confidence 2346 88998887653 46899999999998765
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.2e-10 Score=78.95 Aligned_cols=140 Identities=24% Similarity=0.246 Sum_probs=87.9
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|.+|..+++.|+++| .+|+++.|+........ ....++.+...++.++.+|+.|++++.++++.. .++
T Consensus 6 tGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~--~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~ 83 (181)
T PF08659_consen 6 TGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAE--AAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPID 83 (181)
T ss_dssp ETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHH--HHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EE
T ss_pred ECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHH--HHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcc
Confidence 6999999999999999998 48999999832111100 001223333568999999999999999998642 688
Q ss_pred EEEeccCCCcc--------------------chHHHHHhCC--CCCcEEEEecce-ecccCCCCCCCCCCCCCCCCcc-h
Q 029198 75 VVYDINGREAD--------------------EVEPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~~~~ll~~~~--~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
.|||+++...+ +..++.+++. ..+.+|.+||+. ++|.... ..| .
T Consensus 84 gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq------------~~Yaa 151 (181)
T PF08659_consen 84 GVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQ------------SAYAA 151 (181)
T ss_dssp EEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTB------------HHHHH
T ss_pred eeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcch------------HhHHH
Confidence 99999987422 2566777776 778999999966 5654432 233 3
Q ss_pred hhhhHHHHH---hhcCCcEEEEcccee
Q 029198 131 GKLNTESVL---ESKGVNWTSLRPVYI 154 (197)
Q Consensus 131 ~k~~~e~~~---~~~~~~~~i~r~~~i 154 (197)
.-..++.+. ++.+.+++.+..+.+
T Consensus 152 AN~~lda~a~~~~~~g~~~~sI~wg~W 178 (181)
T PF08659_consen 152 ANAFLDALARQRRSRGLPAVSINWGAW 178 (181)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcccc
Confidence 333344332 457899988887653
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.8e-09 Score=81.26 Aligned_cols=140 Identities=17% Similarity=0.147 Sum_probs=91.5
Q ss_pred CCc--ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGa--tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
||| ++.||.+++++|++.|++|++..|...... .+ ..+....+....+.+|+.|++++.++++. -++
T Consensus 12 tGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (260)
T PRK06997 12 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKD-RI-----TEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGL 85 (260)
T ss_pred eCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHH-HH-----HHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCC
Confidence 675 679999999999999999998876422111 00 01111112234688999999999888753 269
Q ss_pred cEEEeccCCCcc-----------c------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD-----------E------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 74 d~vi~~a~~~~~-----------~------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
|++||+||.... . ++.++..+++..++|++||....-. ..
T Consensus 86 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~-----------~~ 154 (260)
T PRK06997 86 DGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERV-----------VP 154 (260)
T ss_pred cEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccC-----------CC
Confidence 999999986310 0 2223444443368999998654210 00
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
....| .+|...+.+.+ ..+++++.+.||++-.+
T Consensus 155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~ 195 (260)
T PRK06997 155 NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTL 195 (260)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccc
Confidence 12236 88988877653 36899999999998765
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.9e-09 Score=84.55 Aligned_cols=73 Identities=16% Similarity=0.171 Sum_probs=58.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+|++|.+++++|+++|++|++++|++++..... ......+..+.+|+.|++++.+.+. ++|++||+|
T Consensus 184 TGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~--------~~~~~~v~~v~~Dvsd~~~v~~~l~--~IDiLInnA 253 (406)
T PRK07424 184 TGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI--------NGEDLPVKTLHWQVGQEAALAELLE--KVDILIINH 253 (406)
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------hhcCCCeEEEEeeCCCHHHHHHHhC--CCCEEEECC
Confidence 799999999999999999999999999765422111 0111246788899999999999887 899999999
Q ss_pred CCC
Q 029198 81 GRE 83 (197)
Q Consensus 81 ~~~ 83 (197)
|..
T Consensus 254 Gi~ 256 (406)
T PRK07424 254 GIN 256 (406)
T ss_pred CcC
Confidence 864
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.3e-09 Score=78.11 Aligned_cols=136 Identities=22% Similarity=0.322 Sum_probs=97.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
.|+.||+|+++++...+.+++|..+.|+..+. .+.. -...+.|..+|.....-+..... ++..++.++
T Consensus 58 lggnpfsgs~vlk~A~~vv~svgilsen~~k~--~l~s--------w~~~vswh~gnsfssn~~k~~l~--g~t~v~e~~ 125 (283)
T KOG4288|consen 58 LGGNPFSGSEVLKNATNVVHSVGILSENENKQ--TLSS--------WPTYVSWHRGNSFSSNPNKLKLS--GPTFVYEMM 125 (283)
T ss_pred hcCCCcchHHHHHHHHhhceeeeEeecccCcc--hhhC--------CCcccchhhccccccCcchhhhc--CCcccHHHh
Confidence 38899999999999999999999999997652 1111 12578888898887765666666 888888777
Q ss_pred CCCc--------cc--hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcchhhhhHHHHH-hhcCCcEE
Q 029198 81 GREA--------DE--VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL-ESKGVNWT 147 (197)
Q Consensus 81 ~~~~--------~~--~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~~~k~~~e~~~-~~~~~~~~ 147 (197)
+... .+ ..+-..++. ++++|+|+|.. -||-. +..|..|+..|.++|..+ +.++.+-+
T Consensus 126 ggfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~-d~~~~---------~~i~rGY~~gKR~AE~Ell~~~~~rgi 195 (283)
T KOG4288|consen 126 GGFGNIILMDRINGTANINAVKAAAKAGVPRFVYISAH-DFGLP---------PLIPRGYIEGKREAEAELLKKFRFRGI 195 (283)
T ss_pred cCccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhh-hcCCC---------CccchhhhccchHHHHHHHHhcCCCce
Confidence 6531 11 222333333 89999999952 22211 123444569999999865 66789999
Q ss_pred EEccceeeCCC
Q 029198 148 SLRPVYIYGPL 158 (197)
Q Consensus 148 i~r~~~i~g~~ 158 (197)
++|||++||..
T Consensus 196 ilRPGFiyg~R 206 (283)
T KOG4288|consen 196 ILRPGFIYGTR 206 (283)
T ss_pred eeccceeeccc
Confidence 99999999975
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.01 E-value=6.1e-10 Score=82.82 Aligned_cols=139 Identities=22% Similarity=0.245 Sum_probs=96.1
Q ss_pred Ccc--cchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc------cCc
Q 029198 2 GGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGF 73 (197)
Q Consensus 2 Gat--G~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~------~~~ 73 (197)
|++ +.||.+++++|+++|++|++.+|+.++....+ .++.+. ....++.+|+.+++++.++++. -++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~-----~~l~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~i 74 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADAL-----EELAKE-YGAEVIQCDLSDEESVEALFDEAVERFGGRI 74 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHH-----HHHHHH-TTSEEEESCTTSHHHHHHHHHHHHHHHCSSE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHH-----HHHHHH-cCCceEeecCcchHHHHHHHHHHHhhcCCCe
Confidence 667 99999999999999999999999977531111 111111 1244699999999988888653 379
Q ss_pred cEEEeccCCCcc----c------------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD----E------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~----~------------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|++||+++.... . .+.++..++....+|++||...... ...
T Consensus 75 D~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~-----------~~~ 143 (241)
T PF13561_consen 75 DILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP-----------MPG 143 (241)
T ss_dssp SEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB-----------STT
T ss_pred EEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc-----------Ccc
Confidence 999999876532 1 2223333333468999998654221 111
Q ss_pred CCcc-hhhhhHHHHHh-------h-cCCcEEEEccceeeCC
Q 029198 126 KSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~-~~~~~~i~r~~~i~g~ 157 (197)
...| .+|...+.+.+ . .|+++..+.||++..+
T Consensus 144 ~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~ 184 (241)
T PF13561_consen 144 YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETP 184 (241)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSH
T ss_pred chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceecc
Confidence 2246 88888887653 4 7999999999998876
|
... |
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.1e-09 Score=76.62 Aligned_cols=125 Identities=22% Similarity=0.193 Sum_probs=84.6
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecC--CCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cC
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRG--KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~ 72 (197)
|||++.+|.+++++|+++| +.|+++.|+ .+..... ..++.....++.++.+|+.+.++++++++. ..
T Consensus 6 tGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l-----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 6 TGASSGIGRALARALARRGARVVILTSRSEDSEGAQEL-----IQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp ETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHH-----HHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred ECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccc-----ccccccccccccccccccccccccccccccccccccc
Confidence 6999999999999999995 688888887 1211111 112233347899999999999999888763 37
Q ss_pred ccEEEeccCCCccc--------------------hHHHHHhC--CCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 73 FDVVYDINGREADE--------------------VEPILDAL--PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 73 ~d~vi~~a~~~~~~--------------------~~~ll~~~--~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
+|++||++|..... ...+.+++ ++..++|++||....... .....|
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~~~~Y~ 149 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGS-----------PGMSAYS 149 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSS-----------TTBHHHH
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCC-----------CCChhHH
Confidence 99999999875421 11122222 256799999996653211 112246
Q ss_pred hhhhhHHHHHhh
Q 029198 130 KGKLNTESVLES 141 (197)
Q Consensus 130 ~~k~~~e~~~~~ 141 (197)
.+|...+.+.+.
T Consensus 150 askaal~~~~~~ 161 (167)
T PF00106_consen 150 ASKAALRGLTQS 161 (167)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 889988887653
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.98 E-value=9.5e-10 Score=78.76 Aligned_cols=103 Identities=19% Similarity=0.136 Sum_probs=72.6
Q ss_pred chHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc---hhhhhHHHHHhhcCCcEEEEccceeeCCC
Q 029198 86 EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH---KGKLNTESVLESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 86 ~~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~---~~k~~~e~~~~~~~~~~~i~r~~~i~g~~ 158 (197)
.++.+.+++. -.+.+|.+|...+|-......++|++.....++. ..+|+..........+++++|.|.+.|.+
T Consensus 107 ~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~g 186 (315)
T KOG3019|consen 107 VTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKG 186 (315)
T ss_pred HHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecC
Confidence 4667777776 3468999999999988777788888776555443 23555444444456999999999999985
Q ss_pred CCCChHHHH--HHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 159 NYNPVEEWF--FHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 159 ~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
. .++..+ .-.+-.|.+ .|+|.|++.|||++
T Consensus 187 G--Ga~~~M~lpF~~g~GGP---lGsG~Q~fpWIHv~ 218 (315)
T KOG3019|consen 187 G--GALAMMILPFQMGAGGP---LGSGQQWFPWIHVD 218 (315)
T ss_pred C--cchhhhhhhhhhccCCc---CCCCCeeeeeeehH
Confidence 3 233333 334455665 48999999999986
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.5e-09 Score=78.85 Aligned_cols=146 Identities=16% Similarity=0.123 Sum_probs=98.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhh----c--cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----A--KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~----~--~~~d 74 (197)
|||+..||.+++.+|++.|.+|++.+|+++........... .......+..+.+|+.+.++..++++ + -++|
T Consensus 14 TG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~Gkid 91 (270)
T KOG0725|consen 14 TGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGG--LGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKID 91 (270)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCC
Confidence 79999999999999999999999999998764321110000 00002468999999999877766653 2 2699
Q ss_pred EEEeccCCCccc----------------------hHHHH----HhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREADE----------------------VEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 75 ~vi~~a~~~~~~----------------------~~~ll----~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 126 (197)
+++|+||..... ...+. ..++ +-..++++||..-+.... ..+
T Consensus 92 iLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~---------~~~- 161 (270)
T KOG0725|consen 92 ILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGP---------GSG- 161 (270)
T ss_pred EEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC---------CCc-
Confidence 999999875321 11111 1222 345788888865432111 111
Q ss_pred Ccc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
..| .+|...+++.+ ..++++..+-||.+..+.
T Consensus 162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 356 89999998754 478999999999998874
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.3e-08 Score=72.39 Aligned_cols=133 Identities=17% Similarity=0.102 Sum_probs=96.2
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc------cCccE
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFDV 75 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~------~~~d~ 75 (197)
++.|.||.+|++++.+.|+.|++.+|+.+...+ +.+..++.....|+++++++...... -..|+
T Consensus 15 cs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~----------L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 15 CSSGGIGYALAKEFARNGYLVYATARRLEPMAQ----------LAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred cCCcchhHHHHHHHHhCCeEEEEEccccchHhh----------HHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 578999999999999999999999999877432 22235788999999999988776542 25899
Q ss_pred EEeccCCCcc------------------------chHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCC-CCcc
Q 029198 76 VYDINGREAD------------------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH 129 (197)
Q Consensus 76 vi~~a~~~~~------------------------~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~~ 129 (197)
++|.||..-. .++.+...+. ...++|++.|...|-. -| .+.|
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vp------------fpf~~iY 152 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVP------------FPFGSIY 152 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEec------------cchhhhh
Confidence 9999987411 1233333333 5568999999776531 11 2246
Q ss_pred -hhhhhHHHHH-------hhcCCcEEEEccceeeC
Q 029198 130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYG 156 (197)
Q Consensus 130 -~~k~~~e~~~-------~~~~~~~~i~r~~~i~g 156 (197)
.+|.+...+. +-.|++++.+-+|.|-.
T Consensus 153 sAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T 187 (289)
T KOG1209|consen 153 SASKAAIHAYARTLRLELKPFGVRVINAITGGVAT 187 (289)
T ss_pred hHHHHHHHHhhhhcEEeeeccccEEEEecccceec
Confidence 7888877764 34688999998988754
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.1e-08 Score=75.40 Aligned_cols=136 Identities=17% Similarity=0.118 Sum_probs=100.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhh-------ccCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-------AKGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~-------~~~~ 73 (197)
||+-...|..++.+|.++|+.|++....++..+....+ ...++...+..|++++++++++.+ +.+.
T Consensus 35 TGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~-------~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL 107 (322)
T KOG1610|consen 35 TGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGE-------TKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL 107 (322)
T ss_pred ecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhh-------hcCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence 78889999999999999999999999766653322111 004678888999999999988764 3478
Q ss_pred cEEEeccCCCcc-------------------------chHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD-------------------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~-------------------------~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
-.|||+||.... -++.++..++ ...|+|++||+.- .. +.....
T Consensus 108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G--R~---------~~p~~g 176 (322)
T KOG1610|consen 108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG--RV---------ALPALG 176 (322)
T ss_pred eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc--Cc---------cCcccc
Confidence 899999995411 1556667777 5679999999543 11 111234
Q ss_pred cc-hhhhhHHHHH-------hhcCCcEEEEcccee
Q 029198 128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYI 154 (197)
Q Consensus 128 ~~-~~k~~~e~~~-------~~~~~~~~i~r~~~i 154 (197)
+| .||.+.|.+. +.+|+++.++-||.+
T Consensus 177 ~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f 211 (322)
T KOG1610|consen 177 PYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFF 211 (322)
T ss_pred cchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence 57 8999999864 458999999999944
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.1e-08 Score=76.70 Aligned_cols=142 Identities=20% Similarity=0.174 Sum_probs=96.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhcc-CceEEEeecCCCHHH----HHhhhhccCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDF----VKSSLSAKGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~----l~~~~~~~~~d~ 75 (197)
||||..||++.+++|+++|.+|++++|++++....- .++.+.. -++.++..|+.+.+. +++.+....+-+
T Consensus 55 TGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~-----kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI 129 (312)
T KOG1014|consen 55 TGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVA-----KEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI 129 (312)
T ss_pred ECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence 799999999999999999999999999998854321 2333333 368888999997654 566666667888
Q ss_pred EEeccCCCccc--------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREADE--------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~~--------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+||++|...+. ++-++.-|. +...++++||..--- +....+
T Consensus 130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~-----------p~p~~s 198 (312)
T KOG1014|consen 130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLI-----------PTPLLS 198 (312)
T ss_pred EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccc-----------cChhHH
Confidence 99999875321 233333333 455788888744310 111123
Q ss_pred cc-hhhhhHHHH-------HhhcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESV-------LESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~-------~~~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+ .+..|+.+-.+-|..+-++.
T Consensus 199 ~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm 237 (312)
T KOG1014|consen 199 VYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM 237 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence 35 677755543 24568999999999888764
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.9e-09 Score=74.16 Aligned_cols=137 Identities=15% Similarity=0.209 Sum_probs=96.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhcc--CceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS--SKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
||+.|.||.++..+|+++|..+.++..+.+..... .++.+.+ ..+.|+++|+.+..++++++++. .+
T Consensus 11 tggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~------akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~i 84 (261)
T KOG4169|consen 11 TGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAI------AKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTI 84 (261)
T ss_pred ecCCchhhHHHHHHHHHcCchheeehhhhhCHHHH------HHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCce
Confidence 69999999999999999998888888776663211 1222222 46899999999999999888742 79
Q ss_pred cEEEeccCCCc----------------cchHHHHHhCC-----CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hh
Q 029198 74 DVVYDINGREA----------------DEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG 131 (197)
Q Consensus 74 d~vi~~a~~~~----------------~~~~~ll~~~~-----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~ 131 (197)
|++||.||... .++...++.+. .-.-+|++||..-..+....| .| .+
T Consensus 85 DIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~p-----------VY~As 153 (261)
T KOG4169|consen 85 DILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFP-----------VYAAS 153 (261)
T ss_pred EEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccch-----------hhhhc
Confidence 99999999853 34566677776 134799999943221111111 13 33
Q ss_pred hhh---------HHHHHhhcCCcEEEEcccee
Q 029198 132 KLN---------TESVLESKGVNWTSLRPVYI 154 (197)
Q Consensus 132 k~~---------~e~~~~~~~~~~~i~r~~~i 154 (197)
|.. -+.+.++.|+.+..+.||..
T Consensus 154 KaGVvgFTRSla~~ayy~~sGV~~~avCPG~t 185 (261)
T KOG4169|consen 154 KAGVVGFTRSLADLAYYQRSGVRFNAVCPGFT 185 (261)
T ss_pred ccceeeeehhhhhhhhHhhcCEEEEEECCCcc
Confidence 333 24456788999999999976
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.2e-08 Score=72.16 Aligned_cols=137 Identities=19% Similarity=0.199 Sum_probs=98.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+..||..++++|.+.|.+|++..|++..... .....+.+....+|..|.++.+++.+. .+.++
T Consensus 11 TGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e---------~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv 81 (245)
T COG3967 11 TGGASGIGLALAKRFLELGNTVIICGRNEERLAE---------AKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV 81 (245)
T ss_pred eCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHH---------HHhcCcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence 7999999999999999999999999999876432 223357889999999999877776542 27999
Q ss_pred EEeccCCCcc--------------------------chHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD--------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~--------------------------~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+||+||.-.. -+..++..+. ....+|.+||.-.+-.. ....
T Consensus 82 liNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm-----------~~~P 150 (245)
T COG3967 82 LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPM-----------ASTP 150 (245)
T ss_pred eeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcc-----------cccc
Confidence 9999997311 0233455544 35689999985554211 1122
Q ss_pred cc-hhhhhHHHH-------HhhcCCcEEEEccceeeCC
Q 029198 128 RH-KGKLNTESV-------LESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~-------~~~~~~~~~i~r~~~i~g~ 157 (197)
.| .+|.+...+ ++..++++.=+-|+.|-.+
T Consensus 151 vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 151 VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 36 777777654 3456789998999988774
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.82 E-value=5.6e-08 Score=69.78 Aligned_cols=145 Identities=17% Similarity=0.154 Sum_probs=93.9
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecC-CCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-------c
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-------~ 71 (197)
|||.-.||-.|+++|++. |-++++.+++ +++..+.+. .+....+++++++.|+++.+++..+.++ .
T Consensus 9 tGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~-----~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~ 83 (249)
T KOG1611|consen 9 TGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELA-----LKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD 83 (249)
T ss_pred eccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHH-----HhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence 799999999999999987 5565555555 554322221 1112357999999999998877776543 3
Q ss_pred CccEEEeccCCCccc-------------------------hHHHHHhCC-------------CCCcEEEEecceecccCC
Q 029198 72 GFDVVYDINGREADE-------------------------VEPILDALP-------------NLEQFIYCSSAGVYLKSD 113 (197)
Q Consensus 72 ~~d~vi~~a~~~~~~-------------------------~~~ll~~~~-------------~~~~~v~~Ss~~vyg~~~ 113 (197)
+.|.++++||..... ++.++..++ ....+|++||...-
T Consensus 84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s---- 159 (249)
T KOG1611|consen 84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS---- 159 (249)
T ss_pred CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc----
Confidence 799999999873210 233333332 11278889885432
Q ss_pred CCCCCCCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 114 LLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 114 ~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.......+...| .+|.++-.+.+ ..++-++.+.||||-...
T Consensus 160 ----~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDM 208 (249)
T KOG1611|consen 160 ----IGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDM 208 (249)
T ss_pred ----cCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCC
Confidence 111122233446 88888877653 457889999999997653
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.3e-08 Score=74.77 Aligned_cols=147 Identities=8% Similarity=-0.066 Sum_probs=87.7
Q ss_pred CCc--ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCch---h---hh-h-ccCceEEEeecC--CCH-------
Q 029198 1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQ---E---FA-E-FSSKILHLKGDR--KDY------- 61 (197)
Q Consensus 1 tGa--tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~---~~-~-~~~~~~~~~~d~--~~~------- 61 (197)
||| +..||.++++.|++.|.+|++ .|..+..+......... + .. . .......+.+|+ .++
T Consensus 15 TGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 93 (303)
T PLN02730 15 AGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDV 93 (303)
T ss_pred eCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhh
Confidence 789 799999999999999999988 66544321111000000 0 00 0 001145677888 322
Q ss_pred -----------HHHHhhhhc-----cCccEEEeccCCCc---cc-----------------------hHHHHHhCCCCCc
Q 029198 62 -----------DFVKSSLSA-----KGFDVVYDINGREA---DE-----------------------VEPILDALPNLEQ 99 (197)
Q Consensus 62 -----------~~l~~~~~~-----~~~d~vi~~a~~~~---~~-----------------------~~~ll~~~~~~~~ 99 (197)
++++++++. -++|++||+||... .. ++.++..|+...+
T Consensus 94 ~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~ 173 (303)
T PLN02730 94 KTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGA 173 (303)
T ss_pred hcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCE
Confidence 255555542 26999999996421 00 3344555552268
Q ss_pred EEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh-------h-cCCcEEEEccceeeCCC
Q 029198 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 100 ~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~-~~~~~~i~r~~~i~g~~ 158 (197)
+|++||....... +.....| .+|...+.+.+ . .+++++.+.||++-.+.
T Consensus 174 II~isS~a~~~~~----------p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~ 231 (303)
T PLN02730 174 SISLTYIASERII----------PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRA 231 (303)
T ss_pred EEEEechhhcCCC----------CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCch
Confidence 9999986542110 0011236 88999887642 2 57999999999997763
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.76 E-value=8.9e-08 Score=71.99 Aligned_cols=148 Identities=20% Similarity=0.169 Sum_probs=97.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
||++..+|..++..+..+|++|+.+.|+.++....... ..+......+.+..+|+.|.+++...++.. .+|.
T Consensus 39 tggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~---l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~ 115 (331)
T KOG1210|consen 39 TGGSSGLGLALALECKREGADVTITARSGKKLLEAKAE---LELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDN 115 (331)
T ss_pred ecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhh---hhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcce
Confidence 79999999999999999999999999998775321111 111222234779999999999998888754 6999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCCC---CCcEEEEecce-ecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREADE------------------------VEPILDALPN---LEQFIYCSSAG-VYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~~---~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~ 127 (197)
+|||||..+.+ .+..+.+++. ..+|+.+||.. .++=.....+ ...
T Consensus 116 l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaY-------s~s 188 (331)
T KOG1210|consen 116 LFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAY-------SPS 188 (331)
T ss_pred EEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccccccc-------ccH
Confidence 99999985433 2334455552 33888888833 2221111000 001
Q ss_pred cchhhhhHHHH---HhhcCCcEEEEccceeeCCC
Q 029198 128 RHKGKLNTESV---LESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~~~k~~~e~~---~~~~~~~~~i~r~~~i~g~~ 158 (197)
.+..|..++.+ +..+++.++..-|+.+-.|+
T Consensus 189 K~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpG 222 (331)
T KOG1210|consen 189 KFALRGLAEALRQELIKYGVHVTLYYPPDTLTPG 222 (331)
T ss_pred HHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCc
Confidence 12233333332 33468999999999998886
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.6e-07 Score=69.01 Aligned_cols=141 Identities=19% Similarity=0.253 Sum_probs=92.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCc-cCCCCCCCchhhhhcc-CceEEEeecCCC-HHHHHhhhhc-----cC
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFS-SKILHLKGDRKD-YDFVKSSLSA-----KG 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~d~~~-~~~l~~~~~~-----~~ 72 (197)
|||++.+|.++++.|++.|+.|++..|..... ...... ...... ..+.+..+|+++ .++++.+++. -+
T Consensus 11 TGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~ 86 (251)
T COG1028 11 TGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAA----AIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGR 86 (251)
T ss_pred eCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHH----HHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 79999999999999999999999998886641 100000 000000 357788899998 8877776643 14
Q ss_pred ccEEEeccCCCcc--c-----------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 73 FDVVYDINGREAD--E-----------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 73 ~d~vi~~a~~~~~--~-----------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+|+++|+||.... . ++.+...++.. ++|++||.... ..... ..
T Consensus 87 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~Iv~isS~~~~-~~~~~----------~~ 154 (251)
T COG1028 87 IDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-RIVNISSVAGL-GGPPG----------QA 154 (251)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-eEEEECCchhc-CCCCC----------cc
Confidence 9999999997431 1 11122222211 99999996653 22110 23
Q ss_pred cc-hhhhhHHHHH-------hhcCCcEEEEccceeeCC
Q 029198 128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~ 157 (197)
.| .+|.+.+.+. ...|+.++.+.||.+-.+
T Consensus 155 ~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~ 192 (251)
T COG1028 155 AYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP 192 (251)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence 46 8888887654 346899999999965544
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.4e-07 Score=86.40 Aligned_cols=145 Identities=17% Similarity=0.067 Sum_probs=97.0
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCc-----cC-----------------------------CCCCCC-c---
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPI-----AQ-----------------------------QLPGES-D--- 41 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~-----~~-----------------------------~~~~~~-~--- 41 (197)
|||++.||..++++|+++ |++|++++|++... .. ...... .
T Consensus 2003 TGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~~~ei 2082 (2582)
T TIGR02813 2003 TGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLSSLEI 2082 (2582)
T ss_pred eCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccchhHHH
Confidence 799999999999999998 69999999983100 00 000000 0
Q ss_pred ----hhhhhccCceEEEeecCCCHHHHHhhhhcc----CccEEEeccCCCc--------------------cchHHHHHh
Q 029198 42 ----QEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVVYDINGREA--------------------DEVEPILDA 93 (197)
Q Consensus 42 ----~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~----~~d~vi~~a~~~~--------------------~~~~~ll~~ 93 (197)
..+......+.++.+|++|.+++.++++.. ++|.|||+||... .++.+++++
T Consensus 2083 ~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~a 2162 (2582)
T TIGR02813 2083 AQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAA 2162 (2582)
T ss_pred HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 011223456889999999999998887642 6999999999742 124566666
Q ss_pred CC--CCCcEEEEecce-ecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh-----hcCCcEEEEccceeeCC
Q 029198 94 LP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-----SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 94 ~~--~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-----~~~~~~~i~r~~~i~g~ 157 (197)
+. ..++||++||.. .+|... ...| .+|.....+.+ ..+++++.+.+|.+-++
T Consensus 2163 l~~~~~~~IV~~SSvag~~G~~g------------qs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2163 LNAENIKLLALFSSAAGFYGNTG------------QSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred HHHhCCCeEEEEechhhcCCCCC------------cHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence 65 457899999965 444322 1235 67766655432 13588999999988765
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.5e-07 Score=65.08 Aligned_cols=138 Identities=17% Similarity=0.195 Sum_probs=95.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-cCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-~~~d~vi~~ 79 (197)
||+.-.||+.++..|.+.|..|+++.|++....+...+. ...++.+.+|+.+-+.+++.+-. ..+|.++|.
T Consensus 13 TgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~--------p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNN 84 (245)
T KOG1207|consen 13 TGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET--------PSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNN 84 (245)
T ss_pred ecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC--------CcceeeeEecccHHHHHHHhhcccCchhhhhcc
Confidence 678889999999999999999999999988755443321 23489999999999888888764 368999999
Q ss_pred cCCCccc----------------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 80 NGREADE----------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 80 a~~~~~~----------------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
||..... .+++++-. ....++++||...... ....+.| .
T Consensus 85 AgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~-~~GaIVNvSSqas~R~-----------~~nHtvYca 152 (245)
T KOG1207|consen 85 AGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQ-IKGAIVNVSSQASIRP-----------LDNHTVYCA 152 (245)
T ss_pred chhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhcc-CCceEEEecchhcccc-----------cCCceEEee
Confidence 8863111 11222221 2345999998554221 1122345 7
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+|.+.+.+-+ ..++++..+.|..+....
T Consensus 153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~M 187 (245)
T KOG1207|consen 153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDM 187 (245)
T ss_pred cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecc
Confidence 7777665432 246899999999998654
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.8e-08 Score=69.69 Aligned_cols=148 Identities=14% Similarity=0.178 Sum_probs=94.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||||++|. +++.|++.|++|.+.+|+++....... .+. ....+.++.+|+.|++++.++++. ..+|.
T Consensus 6 tGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~-----~l~-~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~ 78 (177)
T PRK08309 6 IGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKR-----EST-TPESITPLPLDYHDDDALKLAIKSTIEKNGPFDL 78 (177)
T ss_pred ECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHH-----Hhh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence 699998875 999999999999999997654221110 000 124678889999999999887763 26788
Q ss_pred EEeccCCCccchHHHHHhCC--CCC----cEEEEecceecccCCCCCCCCCCCCCCCCcchhhhhHHHHHhhcCCcEEEE
Q 029198 76 VYDINGREADEVEPILDALP--NLE----QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL 149 (197)
Q Consensus 76 vi~~a~~~~~~~~~ll~~~~--~~~----~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~i~ 149 (197)
+|+..-. ...+++..+++ +++ +++++=....-. | +...+... .....|.=+
T Consensus 79 lv~~vh~--~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~--------------~------~~~~~~~~-~~~~~~~~i 135 (177)
T PRK08309 79 AVAWIHS--SAKDALSVVCRELDGSSETYRLFHVLGSAASD--------------P------RIPSEKIG-PARCSYRRV 135 (177)
T ss_pred EEEeccc--cchhhHHHHHHHHccCCCCceEEEEeCCcCCc--------------h------hhhhhhhh-hcCCceEEE
Confidence 8876643 57888999988 777 899887533310 0 11222222 244577777
Q ss_pred ccceeeCCCCCCChHH------HHHHHHHcCCCccc
Q 029198 150 RPVYIYGPLNYNPVEE------WFFHRLKAGRPIPI 179 (197)
Q Consensus 150 r~~~i~g~~~~~~~~~------~~~~~~~~~~~~~~ 179 (197)
.+|++.-.. ..++++ ..++.+..+.+..+
T Consensus 136 ~lgf~~~~~-~~rwlt~~ei~~gv~~~~~~~~~~~~ 170 (177)
T PRK08309 136 ILGFVLEDT-YSRWLTHEEISDGVIKAIESDADEHV 170 (177)
T ss_pred EEeEEEeCC-ccccCchHHHHHHHHHHHhcCCCeEE
Confidence 788777653 344432 24555555544433
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.2e-07 Score=68.37 Aligned_cols=75 Identities=16% Similarity=0.125 Sum_probs=51.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
.|||+|++|+++|+++|++|+.+++........... ......+.++....+.+.+++...++|+|||+|+.
T Consensus 27 SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~---------~~~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAv 97 (229)
T PRK09620 27 AKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINN---------QLELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAG 97 (229)
T ss_pred CcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCC---------ceeEEEEecHHHHHHHHHHHhcccCCCEEEECccc
Confidence 479999999999999999999998753321111100 12344455644444677777765589999999998
Q ss_pred Cccc
Q 029198 83 EADE 86 (197)
Q Consensus 83 ~~~~ 86 (197)
..-.
T Consensus 98 sD~~ 101 (229)
T PRK09620 98 SDWV 101 (229)
T ss_pred ccee
Confidence 5433
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.5e-07 Score=66.25 Aligned_cols=78 Identities=19% Similarity=0.225 Sum_probs=57.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|.+|.++++.|++.|++|++.+|+.+...... .++........++.+|+.+.+++.++++. -++|+
T Consensus 22 TGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDi 96 (169)
T PRK06720 22 TGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATV-----EEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDM 96 (169)
T ss_pred ecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999999999998765421110 11112234567889999999888876532 26999
Q ss_pred EEeccCCC
Q 029198 76 VYDINGRE 83 (197)
Q Consensus 76 vi~~a~~~ 83 (197)
+||+||..
T Consensus 97 lVnnAG~~ 104 (169)
T PRK06720 97 LFQNAGLY 104 (169)
T ss_pred EEECCCcC
Confidence 99999863
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.5e-06 Score=64.08 Aligned_cols=69 Identities=17% Similarity=0.251 Sum_probs=48.1
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC--HHHHHhhhhccCccEEEec
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~l~~~~~~~~~d~vi~~ 79 (197)
.+||++|.+|+++|+++|++|++++|........ ..++.++.++..+ .+.+.+.+. ++|+|||+
T Consensus 23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~~------------~~~v~~i~v~s~~~m~~~l~~~~~--~~DivIh~ 88 (229)
T PRK06732 23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPEP------------HPNLSIIEIENVDDLLETLEPLVK--DHDVLIHS 88 (229)
T ss_pred ccchHHHHHHHHHHHhCCCEEEEEECcccccCCC------------CCCeEEEEEecHHHHHHHHHHHhc--CCCEEEeC
Confidence 4799999999999999999999999764321100 1345565543322 245555565 79999999
Q ss_pred cCCCc
Q 029198 80 NGREA 84 (197)
Q Consensus 80 a~~~~ 84 (197)
|+...
T Consensus 89 AAvsd 93 (229)
T PRK06732 89 MAVSD 93 (229)
T ss_pred CccCC
Confidence 99853
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.1e-07 Score=71.02 Aligned_cols=92 Identities=17% Similarity=0.225 Sum_probs=68.0
Q ss_pred CCcccchHHHHHHHHHH----CCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~v 76 (197)
.|||||.|..+++++++ .+..+-+-.|++.+....+......--... +...++.+|..|++++.+..+ ++.+|
T Consensus 11 yGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~l-s~~~i~i~D~~n~~Sl~emak--~~~vi 87 (423)
T KOG2733|consen 11 YGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDL-SSSVILIADSANEASLDEMAK--QARVI 87 (423)
T ss_pred EccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCc-ccceEEEecCCCHHHHHHHHh--hhEEE
Confidence 49999999999999999 678899999998876443321111100111 233489999999999999999 99999
Q ss_pred EeccCCCccchHHHHHhCC
Q 029198 77 YDINGREADEVEPILDALP 95 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~ 95 (197)
+||.|+..-.-++++.+|.
T Consensus 88 vN~vGPyR~hGE~VVkaci 106 (423)
T KOG2733|consen 88 VNCVGPYRFHGEPVVKACI 106 (423)
T ss_pred EeccccceecCcHHHHHHH
Confidence 9999987555555655555
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.6e-06 Score=68.04 Aligned_cols=90 Identities=23% Similarity=0.246 Sum_probs=70.0
Q ss_pred cccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
|+|+||+.++..|+++| .+|++.+|+.++..+... ...++++.+..|..|.+.+.++++ +.|+|||++.
T Consensus 8 GaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~--------~~~~~v~~~~vD~~d~~al~~li~--~~d~VIn~~p 77 (389)
T COG1748 8 GAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAE--------LIGGKVEALQVDAADVDALVALIK--DFDLVINAAP 77 (389)
T ss_pred CCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh--------hccccceeEEecccChHHHHHHHh--cCCEEEEeCC
Confidence 45999999999999999 899999999776432211 112479999999999999999999 7799999997
Q ss_pred CCccchHHHHHhCC-CCCcEEEEe
Q 029198 82 READEVEPILDALP-NLEQFIYCS 104 (197)
Q Consensus 82 ~~~~~~~~ll~~~~-~~~~~v~~S 104 (197)
.. -..+++++|. .-.+++-+|
T Consensus 78 ~~--~~~~i~ka~i~~gv~yvDts 99 (389)
T COG1748 78 PF--VDLTILKACIKTGVDYVDTS 99 (389)
T ss_pred ch--hhHHHHHHHHHhCCCEEEcc
Confidence 65 3337777776 334666555
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=5e-05 Score=58.40 Aligned_cols=28 Identities=18% Similarity=0.088 Sum_probs=24.8
Q ss_pred CCcc--cchHHHHHHHHHHCCCeEEEEecC
Q 029198 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRG 28 (197)
Q Consensus 1 tGat--G~vG~~l~~~L~~~g~~V~~~~r~ 28 (197)
|||+ ..||.++++.|+++|++|++.++.
T Consensus 14 TGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 14 AGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred eCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 6884 899999999999999999997654
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=4.8e-06 Score=64.34 Aligned_cols=147 Identities=20% Similarity=0.204 Sum_probs=87.2
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
+|++|.||+.++..|+..+ +++.++++....... .++..... .....+..|+.++.+.++ ++|+||+
T Consensus 14 iGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a-------~Dl~~~~~--~~~v~~~td~~~~~~~l~--gaDvVVi 82 (321)
T PTZ00325 14 LGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVA-------ADLSHIDT--PAKVTGYADGELWEKALR--GADLVLI 82 (321)
T ss_pred ECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccc-------cchhhcCc--CceEEEecCCCchHHHhC--CCCEEEE
Confidence 5888999999999998665 699999993222111 01111112 223345555555566777 9999999
Q ss_pred ccCCCcc--------------chHHHHHhCC--CCCcEEEEecceecccCCCC--CCCCCCCCCCCCcc-hhhhhHHH--
Q 029198 79 INGREAD--------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNTES-- 137 (197)
Q Consensus 79 ~a~~~~~--------------~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~--~~~e~~~~~~~~~~-~~k~~~e~-- 137 (197)
++|.... .+++++++++ +++++|+++|-.+-...... ...+.....|...+ .+-+..-+
T Consensus 83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r 162 (321)
T PTZ00325 83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRAR 162 (321)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHH
Confidence 9998532 2556777777 88999999996653321110 11122233344444 22122222
Q ss_pred --HHhhcCCcEEEEccceeeCCCC
Q 029198 138 --VLESKGVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 138 --~~~~~~~~~~i~r~~~i~g~~~ 159 (197)
..+..+++...++ ++++|+..
T Consensus 163 ~~la~~l~v~~~~V~-~~VlGeHG 185 (321)
T PTZ00325 163 KFVAEALGMNPYDVN-VPVVGGHS 185 (321)
T ss_pred HHHHHHhCcChhheE-EEEEeecC
Confidence 1245678777777 88888754
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.17 E-value=8.2e-06 Score=61.06 Aligned_cols=70 Identities=17% Similarity=0.207 Sum_probs=54.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+||||. |..+++.|.+.|++|++.++++..... +.. .+...+..+..|.+++.+.+...++|+||+++
T Consensus 6 lGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~-~~~----------~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAt 73 (256)
T TIGR00715 6 MGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHL-YPI----------HQALTVHTGALDPQELREFLKRHSIDILVDAT 73 (256)
T ss_pred EechHH-HHHHHHHHHhCCCeEEEEEccCCcccc-ccc----------cCCceEEECCCCHHHHHHHHHhcCCCEEEEcC
Confidence 599999 999999999999999999999875322 110 12334556677888899999888999999987
Q ss_pred CC
Q 029198 81 GR 82 (197)
Q Consensus 81 ~~ 82 (197)
..
T Consensus 74 HP 75 (256)
T TIGR00715 74 HP 75 (256)
T ss_pred CH
Confidence 65
|
This enzyme was found to be a monomer by gel filtration. |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.1e-06 Score=67.36 Aligned_cols=92 Identities=23% Similarity=0.295 Sum_probs=66.5
Q ss_pred CCcccchHHHHHHHHHHCC-C-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEG-H-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
+|| |++|+.+++.|++.+ + +|++.+|+.++........ ...++.+...|..|.+++.++++ ++|+|||
T Consensus 4 lG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~l~~~~~--~~dvVin 73 (386)
T PF03435_consen 4 LGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-------LGDRVEAVQVDVNDPESLAELLR--GCDVVIN 73 (386)
T ss_dssp E---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---------TTTTEEEEE--TTTHHHHHHHHT--TSSEEEE
T ss_pred EcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-------cccceeEEEEecCCHHHHHHHHh--cCCEEEE
Confidence 488 999999999999997 4 8999999987743221100 23689999999999999999999 8899999
Q ss_pred ccCCCccchHHHHHhCC-CCCcEEEEe
Q 029198 79 INGREADEVEPILDALP-NLEQFIYCS 104 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~-~~~~~v~~S 104 (197)
|++.. ....++++|. ...++|-.|
T Consensus 74 ~~gp~--~~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 74 CAGPF--FGEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp -SSGG--GHHHHHHHHHHHT-EEEESS
T ss_pred CCccc--hhHHHHHHHHHhCCCeeccc
Confidence 99875 5567777777 334666643
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.05 E-value=9.2e-06 Score=63.07 Aligned_cols=75 Identities=16% Similarity=0.087 Sum_probs=47.4
Q ss_pred CCcccchHHHHHHHHHHCC-------CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCc
Q 029198 1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~ 73 (197)
|||+|++|++++..|+..+ .+|+++++++... ..... ..++.. -......|+....++.+.++ ++
T Consensus 8 ~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~--~~~g~-~~Dl~d---~~~~~~~~~~~~~~~~~~l~--~a 79 (325)
T cd01336 8 TGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK--ALEGV-VMELQD---CAFPLLKSVVATTDPEEAFK--DV 79 (325)
T ss_pred ECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc--cccce-eeehhh---ccccccCCceecCCHHHHhC--CC
Confidence 6999999999999999854 5899999975421 11110 001110 00011224444455667777 99
Q ss_pred cEEEeccCCC
Q 029198 74 DVVYDINGRE 83 (197)
Q Consensus 74 d~vi~~a~~~ 83 (197)
|+|||+||..
T Consensus 80 DiVI~tAG~~ 89 (325)
T cd01336 80 DVAILVGAMP 89 (325)
T ss_pred CEEEEeCCcC
Confidence 9999999985
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.92 E-value=5e-05 Score=52.66 Aligned_cols=75 Identities=21% Similarity=0.278 Sum_probs=62.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||...+|...++.|.+.|..|.+++...++... ...+...++.|...|.+++++++.++... +.|.
T Consensus 15 tggasglg~ataerlakqgasv~lldlp~skg~~--------vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 15 TGGASGLGKATAERLAKQGASVALLDLPQSKGAD--------VAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred ecCcccccHHHHHHHHhcCceEEEEeCCcccchH--------HHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 6899999999999999999999999998766432 22344578999999999999999887542 7999
Q ss_pred EEeccCCC
Q 029198 76 VYDINGRE 83 (197)
Q Consensus 76 vi~~a~~~ 83 (197)
.+||||..
T Consensus 87 ~vncagia 94 (260)
T KOG1199|consen 87 LVNCAGIA 94 (260)
T ss_pred eeecccee
Confidence 99999873
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.91 E-value=4.5e-05 Score=59.06 Aligned_cols=97 Identities=19% Similarity=0.194 Sum_probs=63.3
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||+|.||+.++..|+.++ .++.+++..+..... .++....... ...++.+.+++.+.++ ++|+||+
T Consensus 24 iGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a-------~Dl~~~~~~~--~i~~~~~~~d~~~~l~--~aDiVVi 92 (323)
T PLN00106 24 LGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVA-------ADVSHINTPA--QVRGFLGDDQLGDALK--GADLVII 92 (323)
T ss_pred ECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeE-------chhhhCCcCc--eEEEEeCCCCHHHHcC--CCCEEEE
Confidence 6889999999999999776 489999997722111 1111111111 2234434445677777 9999999
Q ss_pred ccCCCcc--------------chHHHHHhCC--CCCcEEEEeccee
Q 029198 79 INGREAD--------------EVEPILDALP--NLEQFIYCSSAGV 108 (197)
Q Consensus 79 ~a~~~~~--------------~~~~ll~~~~--~~~~~v~~Ss~~v 108 (197)
+||.... .++++.+.++ +.+.+++++|--+
T Consensus 93 tAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPv 138 (323)
T PLN00106 93 PAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPV 138 (323)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 9997432 1455666666 7788888887333
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=97.84 E-value=2.9e-05 Score=57.27 Aligned_cols=64 Identities=20% Similarity=0.277 Sum_probs=45.7
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccEEE
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDVVY 77 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~vi 77 (197)
++|.+|.++++.|+++|++|+++++.... . . .....+|+.+.+++.++++. .++|++|
T Consensus 23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-~-~---------------~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLV 85 (227)
T TIGR02114 23 STGHLGKIITETFLSAGHEVTLVTTKRAL-K-P---------------EPHPNLSIREIETTKDLLITLKELVQEHDILI 85 (227)
T ss_pred cccHHHHHHHHHHHHCCCEEEEEcChhhc-c-c---------------ccCCcceeecHHHHHHHHHHHHHHcCCCCEEE
Confidence 68999999999999999999998763211 0 0 00134677887766655432 2689999
Q ss_pred eccCCC
Q 029198 78 DINGRE 83 (197)
Q Consensus 78 ~~a~~~ 83 (197)
|+||..
T Consensus 86 nnAgv~ 91 (227)
T TIGR02114 86 HSMAVS 91 (227)
T ss_pred ECCEec
Confidence 999864
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.84 E-value=3.2e-05 Score=55.66 Aligned_cols=76 Identities=21% Similarity=0.225 Sum_probs=55.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+||+|.+|+.+++.|++.|++|++++|+.++..... ..+.+ ..+.....+|..+.+++.+++. ++|+||++.
T Consensus 34 lGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~-----~~l~~-~~~~~~~~~~~~~~~~~~~~~~--~~diVi~at 105 (194)
T cd01078 34 LGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAA-----DSLRA-RFGEGVGAVETSDDAARAAAIK--GADVVFAAG 105 (194)
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHh-hcCCcEEEeeCCCHHHHHHHHh--cCCEEEECC
Confidence 589999999999999999999999999865422110 00100 1134556678889998888888 899999876
Q ss_pred CCCc
Q 029198 81 GREA 84 (197)
Q Consensus 81 ~~~~ 84 (197)
....
T Consensus 106 ~~g~ 109 (194)
T cd01078 106 AAGV 109 (194)
T ss_pred CCCc
Confidence 5543
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.75 E-value=3.6e-05 Score=58.64 Aligned_cols=82 Identities=20% Similarity=0.161 Sum_probs=59.3
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
||+||.|..++++|+++|.+-.+-.|+..+....-. +. +-.+-..++.++..+++... +..+|+||+|
T Consensus 13 GAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~--------~L--G~~~~~~p~~~p~~~~~~~~--~~~VVlncvG 80 (382)
T COG3268 13 GATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRA--------SL--GPEAAVFPLGVPAALEAMAS--RTQVVLNCVG 80 (382)
T ss_pred ccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHH--------hc--CccccccCCCCHHHHHHHHh--cceEEEeccc
Confidence 999999999999999999988888888776432110 11 22333344556888999998 9999999999
Q ss_pred CCccchHHHHHhCC
Q 029198 82 READEVEPILDALP 95 (197)
Q Consensus 82 ~~~~~~~~ll~~~~ 95 (197)
.....-..++++|.
T Consensus 81 Pyt~~g~plv~aC~ 94 (382)
T COG3268 81 PYTRYGEPLVAACA 94 (382)
T ss_pred cccccccHHHHHHH
Confidence 87555444554444
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=6.7e-05 Score=59.03 Aligned_cols=82 Identities=11% Similarity=0.044 Sum_probs=55.6
Q ss_pred CCcccchHHH--HHHHHHHCCCeEEEEecCCCCccCCC------C-CCCchhhhhccCceEEEeecCCCHHHHHhhhhcc
Q 029198 1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQL------P-GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK 71 (197)
Q Consensus 1 tGatG~vG~~--l~~~L~~~g~~V~~~~r~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~ 71 (197)
||+++.+|.+ +++.| +.|.+|+++++..+...... . ........+....+..+.+|+++++++.++++..
T Consensus 47 TGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I 125 (398)
T PRK13656 47 IGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKVIELI 125 (398)
T ss_pred ECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 7999999999 89999 99999999986432211100 0 0000111222234678899999999888776531
Q ss_pred -----CccEEEeccCCC
Q 029198 72 -----GFDVVYDINGRE 83 (197)
Q Consensus 72 -----~~d~vi~~a~~~ 83 (197)
++|+++|+++..
T Consensus 126 ~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 126 KQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHhcCCCCEEEECCccC
Confidence 699999998875
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00013 Score=58.26 Aligned_cols=64 Identities=17% Similarity=0.135 Sum_probs=49.4
Q ss_pred ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc--cCccEEEeccC
Q 029198 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDING 81 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~--~~~d~vi~~a~ 81 (197)
+|.+|.+++++|.++|++|++++++... . .. .+ ....|+.+.+++.+++.+ ..+|++||+||
T Consensus 213 SG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~--~~-----------~~--~~~~dv~~~~~~~~~v~~~~~~~DilI~~Aa 276 (399)
T PRK05579 213 SGKMGYALARAAARRGADVTLVSGPVNL-P--TP-----------AG--VKRIDVESAQEMLDAVLAALPQADIFIMAAA 276 (399)
T ss_pred cchHHHHHHHHHHHCCCEEEEeCCCccc-c--CC-----------CC--cEEEccCCHHHHHHHHHHhcCCCCEEEEccc
Confidence 8999999999999999999999986531 1 00 11 245688998888877653 26999999999
Q ss_pred CC
Q 029198 82 RE 83 (197)
Q Consensus 82 ~~ 83 (197)
..
T Consensus 277 v~ 278 (399)
T PRK05579 277 VA 278 (399)
T ss_pred cc
Confidence 75
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00011 Score=54.19 Aligned_cols=91 Identities=24% Similarity=0.326 Sum_probs=65.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhh-hhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~~~d~vi~~a~ 81 (197)
|.|.+|..+++.|.+.||+|++++++++........ ......+.+|-+|++.|+++ +. ++|+++-+.+
T Consensus 7 G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---------~~~~~~v~gd~t~~~~L~~agi~--~aD~vva~t~ 75 (225)
T COG0569 7 GAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---------ELDTHVVIGDATDEDVLEEAGID--DADAVVAATG 75 (225)
T ss_pred CCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---------hcceEEEEecCCCHHHHHhcCCC--cCCEEEEeeC
Confidence 679999999999999999999999998875432211 13678999999999999998 56 9999997776
Q ss_pred CCccchHHHHHhCC--CCCcEEEEe
Q 029198 82 READEVEPILDALP--NLEQFIYCS 104 (197)
Q Consensus 82 ~~~~~~~~ll~~~~--~~~~~v~~S 104 (197)
......-...-+++ ++++++.--
T Consensus 76 ~d~~N~i~~~la~~~~gv~~viar~ 100 (225)
T COG0569 76 NDEVNSVLALLALKEFGVPRVIARA 100 (225)
T ss_pred CCHHHHHHHHHHHHhcCCCcEEEEe
Confidence 53222211112222 666666433
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00029 Score=55.90 Aligned_cols=95 Identities=19% Similarity=0.226 Sum_probs=59.6
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhh-hhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~~~d~vi~ 78 (197)
+||||++|..|++.|.++ +.+|..+++.+.... .+.. ........|..+.+.+... ++ ++|+||.
T Consensus 44 vGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~-~i~~----------~~~~l~~~~~~~~~~~~~~~~~--~~DvVf~ 110 (381)
T PLN02968 44 LGASGYTGAEVRRLLANHPDFEITVMTADRKAGQ-SFGS----------VFPHLITQDLPNLVAVKDADFS--DVDAVFC 110 (381)
T ss_pred ECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCC-Cchh----------hCccccCccccceecCCHHHhc--CCCEEEE
Confidence 599999999999999998 579999998654421 1110 0111122333322222222 44 8999998
Q ss_pred ccCCCccchHHHHHhCCCCCcEEEEecceecc
Q 029198 79 INGREADEVEPILDALPNLEQFIYCSSAGVYL 110 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~v~~Ss~~vyg 110 (197)
+.+. .....++..+....++|-.|+..-+.
T Consensus 111 Alp~--~~s~~i~~~~~~g~~VIDlSs~fRl~ 140 (381)
T PLN02968 111 CLPH--GTTQEIIKALPKDLKIVDLSADFRLR 140 (381)
T ss_pred cCCH--HHHHHHHHHHhCCCEEEEcCchhccC
Confidence 7654 35666777666336899999866554
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0016 Score=48.16 Aligned_cols=77 Identities=16% Similarity=0.199 Sum_probs=56.1
Q ss_pred CCcccchHHHHHHHHHHCCC-----eEEEEecCCCCccCCCCCCCchhhhhcc----CceEEEeecCCCHHHHHhhhhc-
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-----QVTLFTRGKAPIAQQLPGESDQEFAEFS----SKILHLKGDRKDYDFVKSSLSA- 70 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-----~V~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~l~~~~~~- 70 (197)
||++..+|-+|+..|++... .+....|+-++.+..- ..+++.. -+++++..|+++..++.++.++
T Consensus 9 TGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc-----~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di 83 (341)
T KOG1478|consen 9 TGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVC-----AALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI 83 (341)
T ss_pred ecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHH-----HHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence 79999999999999999864 4777778766653211 1222222 2688999999998877776543
Q ss_pred ----cCccEEEeccCC
Q 029198 71 ----KGFDVVYDINGR 82 (197)
Q Consensus 71 ----~~~d~vi~~a~~ 82 (197)
.+.|.|+-.||.
T Consensus 84 ~~rf~~ld~iylNAg~ 99 (341)
T KOG1478|consen 84 KQRFQRLDYIYLNAGI 99 (341)
T ss_pred HHHhhhccEEEEcccc
Confidence 279999988876
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00025 Score=55.02 Aligned_cols=156 Identities=13% Similarity=0.150 Sum_probs=84.9
Q ss_pred CCcccchHHHHHHHHHHCCC-------eEEEEecCCCC--ccCCCCCCCchhhhhc----cCceEEEeecCCCHHHHHhh
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAP--IAQQLPGESDQEFAEF----SSKILHLKGDRKDYDFVKSS 67 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~l~~~ 67 (197)
+||+|.||+.++..|+..|. ++++++..+.. ..... .++... ..++++. -.+ .+.
T Consensus 8 iGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a-----~Dl~~~~~~~~~~~~i~---~~~----~~~ 75 (322)
T cd01338 8 TGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVA-----MELEDCAFPLLAEIVIT---DDP----NVA 75 (322)
T ss_pred ECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceee-----hhhhhccccccCceEEe---cCc----HHH
Confidence 58889999999999998874 89999996543 11110 111111 0122221 122 334
Q ss_pred hhccCccEEEeccCCCccc--------------hHHHHHhCC--C--CCcEEEEecce---ecccCCCCCCCCCCC-CCC
Q 029198 68 LSAKGFDVVYDINGREADE--------------VEPILDALP--N--LEQFIYCSSAG---VYLKSDLLPHCETDT-VDP 125 (197)
Q Consensus 68 ~~~~~~d~vi~~a~~~~~~--------------~~~ll~~~~--~--~~~~v~~Ss~~---vyg~~~~~~~~e~~~-~~~ 125 (197)
++ +.|+||.+||..... .+.+...+. . ...++.+|... +|--. .... ..+
T Consensus 76 ~~--daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~------k~sg~~p~ 147 (322)
T cd01338 76 FK--DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAM------KNAPDIPP 147 (322)
T ss_pred hC--CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHH------HHcCCCCh
Confidence 44 999999999874321 233444443 3 23455555311 11100 0111 122
Q ss_pred CCcc-hhhhhHHHHH----hhcCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCc
Q 029198 126 KSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI 177 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~----~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~ 177 (197)
...+ .++...+++. +..+++...+|..++||+.. +.+++.|-.....|+++
T Consensus 148 ~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG-~s~vp~~S~~~v~g~pl 203 (322)
T cd01338 148 DNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS-PTQYPDFTNATIGGKPA 203 (322)
T ss_pred HheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc-ccEEEehhhcEECCEeH
Confidence 2333 4566665543 56789999999999999963 34444444444455544
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00071 Score=52.59 Aligned_cols=29 Identities=21% Similarity=0.151 Sum_probs=25.0
Q ss_pred CCcccchHHHHHHHHHHCC-------CeEEEEecCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGK 29 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-------~~V~~~~r~~ 29 (197)
+||+|.+|+.++..|+..+ ++++++++++
T Consensus 6 iGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~ 41 (323)
T cd00704 6 TGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP 41 (323)
T ss_pred ECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC
Confidence 6899999999999999865 2599999976
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0013 Score=51.03 Aligned_cols=94 Identities=19% Similarity=0.253 Sum_probs=56.9
Q ss_pred CCcccchHHHHHHHHHH---CCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
+||+|.+|++++..|.. .+++++++++++.. ... ..++... +....+.+ .+.+++.+.++ ++|+||
T Consensus 6 IGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~-----alDl~~~-~~~~~i~~--~~~~d~~~~l~--~~DiVI 74 (312)
T PRK05086 6 LGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGV-----AVDLSHI-PTAVKIKG--FSGEDPTPALE--GADVVL 74 (312)
T ss_pred ECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cce-----ehhhhcC-CCCceEEE--eCCCCHHHHcC--CCCEEE
Confidence 58999999999998855 24789999987432 100 0111110 11122233 22334445556 899999
Q ss_pred eccCCCcc--------------chHHHHHhCC--CCCcEEEEec
Q 029198 78 DINGREAD--------------EVEPILDALP--NLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~--------------~~~~ll~~~~--~~~~~v~~Ss 105 (197)
.++|.... .++.+++.++ +.++++.+.|
T Consensus 75 itaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs 118 (312)
T PRK05086 75 ISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT 118 (312)
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 99997432 2455666666 6777777776
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00045 Score=52.90 Aligned_cols=74 Identities=12% Similarity=0.134 Sum_probs=51.6
Q ss_pred CCcccchHHHHHHHHHHCCCe-EEEEecCCC---CccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKA---PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~v 76 (197)
+|| |.+|.+++..|++.|.+ |+++.|+.+ +..+.. .++.+....+.+...|+.+.+++.+.++ ..|+|
T Consensus 132 ~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~-----~~l~~~~~~~~~~~~d~~~~~~~~~~~~--~~Dil 203 (289)
T PRK12548 132 IGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTA-----EKIKQEVPECIVNVYDLNDTEKLKAEIA--SSDIL 203 (289)
T ss_pred ECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHH-----HHHhhcCCCceeEEechhhhhHHHhhhc--cCCEE
Confidence 477 89999999999999985 999999862 211110 1111112344566778888888887777 78999
Q ss_pred EeccCC
Q 029198 77 YDINGR 82 (197)
Q Consensus 77 i~~a~~ 82 (197)
||+...
T Consensus 204 INaTp~ 209 (289)
T PRK12548 204 VNATLV 209 (289)
T ss_pred EEeCCC
Confidence 998654
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00084 Score=52.21 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=25.6
Q ss_pred CCcccchHHHHHHHHHHCC-------CeEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-------~~V~~~~r~~~~ 31 (197)
+||+|.||+.++..|+..+ ++++++++.+..
T Consensus 5 iGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~ 42 (324)
T TIGR01758 5 TGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM 42 (324)
T ss_pred ECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc
Confidence 5889999999999999754 269999996553
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0059 Score=44.11 Aligned_cols=106 Identities=16% Similarity=0.195 Sum_probs=66.9
Q ss_pred cccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCC----CC------------CchhhhhccCceEEEee--cCCC-HH
Q 029198 3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLP----GE------------SDQEFAEFSSKILHLKG--DRKD-YD 62 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~----~~------------~~~~~~~~~~~~~~~~~--d~~~-~~ 62 (197)
|+|.+|.++++.|+..| .++++++...-...+..+ .. ....+.+.++.+.+... ++.+ .+
T Consensus 26 G~gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~~~~~~~~~ 105 (198)
T cd01485 26 GAGALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVEEDSLSNDS 105 (198)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEecccccchh
Confidence 45669999999999999 479999887433221111 10 01224566676655544 3432 45
Q ss_pred HHHhhhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecceeccc
Q 029198 63 FVKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK 111 (197)
Q Consensus 63 ~l~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~ 111 (197)
...+.++ ++|+||.+.. +......+-+.++ ....+|+.++.+.||.
T Consensus 106 ~~~~~~~--~~dvVi~~~d-~~~~~~~ln~~c~~~~ip~i~~~~~G~~G~ 152 (198)
T cd01485 106 NIEEYLQ--KFTLVIATEE-NYERTAKVNDVCRKHHIPFISCATYGLIGY 152 (198)
T ss_pred hHHHHHh--CCCEEEECCC-CHHHHHHHHHHHHHcCCCEEEEEeecCEEE
Confidence 5666777 8999997743 3333344556677 5568898888777764
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.00035 Score=54.39 Aligned_cols=64 Identities=22% Similarity=0.273 Sum_probs=44.3
Q ss_pred CCcccchHHHHHHHHHHC-C-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE-G-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||+|++|+.++++|+++ | .+++++.|+.+.... +. .. +..+++. .+.+++. ++|+|+|
T Consensus 161 tGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~-La-----------~e--l~~~~i~---~l~~~l~--~aDiVv~ 221 (340)
T PRK14982 161 VGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQE-LQ-----------AE--LGGGKIL---SLEEALP--EADIVVW 221 (340)
T ss_pred EccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHH-HH-----------HH--hccccHH---hHHHHHc--cCCEEEE
Confidence 699999999999999865 5 689999987554221 10 01 1112332 3556777 8999999
Q ss_pred ccCCC
Q 029198 79 INGRE 83 (197)
Q Consensus 79 ~a~~~ 83 (197)
+++..
T Consensus 222 ~ts~~ 226 (340)
T PRK14982 222 VASMP 226 (340)
T ss_pred CCcCC
Confidence 99864
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0022 Score=47.12 Aligned_cols=106 Identities=18% Similarity=0.130 Sum_probs=72.5
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCC--------------CCCchhhhhccCceEEEee-cCCCHHHHHh
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP--------------GESDQEFAEFSSKILHLKG-DRKDYDFVKS 66 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~-d~~~~~~l~~ 66 (197)
|.|.||++.++.|++.|. ++.+++-..-...+..+ +....++..+++..++... |...++.+.+
T Consensus 37 GiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~t~en~~~ 116 (263)
T COG1179 37 GIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFITEENLED 116 (263)
T ss_pred ecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhhCHhHHHH
Confidence 569999999999999995 78888876543321111 1113456777888888776 4558888888
Q ss_pred hhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecceecccC
Q 029198 67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLKS 112 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~ 112 (197)
++.. ++|+||.+.- ++..--.|+..|+ ... -++||+++-+..
T Consensus 117 ~~~~-~~DyvIDaiD-~v~~Kv~Li~~c~~~ki--~vIss~Gag~k~ 159 (263)
T COG1179 117 LLSK-GFDYVIDAID-SVRAKVALIAYCRRNKI--PVISSMGAGGKL 159 (263)
T ss_pred HhcC-CCCEEEEchh-hhHHHHHHHHHHHHcCC--CEEeeccccCCC
Confidence 8874 8999999873 2333446777777 333 466777776643
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0029 Score=45.12 Aligned_cols=66 Identities=11% Similarity=0.129 Sum_probs=39.7
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc--cCccEEEecc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDIN 80 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~--~~~d~vi~~a 80 (197)
.||..|.+|++++..+|++|+.+.....-.. ...+..+.. ...+++.+++.. ...|++|++|
T Consensus 27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~--------------p~~~~~i~v--~sa~em~~~~~~~~~~~Di~I~aA 90 (185)
T PF04127_consen 27 SSGKMGAALAEEAARRGAEVTLIHGPSSLPP--------------PPGVKVIRV--ESAEEMLEAVKELLPSADIIIMAA 90 (185)
T ss_dssp --SHHHHHHHHHHHHTT-EEEEEE-TTS------------------TTEEEEE---SSHHHHHHHHHHHGGGGSEEEE-S
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCccccc--------------cccceEEEe--cchhhhhhhhccccCcceeEEEec
Confidence 5899999999999999999999999742210 135555554 554444444332 1679999999
Q ss_pred CCCc
Q 029198 81 GREA 84 (197)
Q Consensus 81 ~~~~ 84 (197)
+...
T Consensus 91 AVsD 94 (185)
T PF04127_consen 91 AVSD 94 (185)
T ss_dssp B--S
T ss_pred chhh
Confidence 9753
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0041 Score=49.62 Aligned_cols=64 Identities=20% Similarity=0.270 Sum_probs=47.2
Q ss_pred ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHH-Hhhhhc--cCccEEEecc
Q 029198 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLSA--KGFDVVYDIN 80 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l-~~~~~~--~~~d~vi~~a 80 (197)
||.+|.+++++|.++|++|+.+.+..... .. ..+ ...|+.+.+++ .++++. .++|++|++|
T Consensus 210 SG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~~-----------~~~--~~~~v~~~~~~~~~~~~~~~~~~D~~i~~A 273 (390)
T TIGR00521 210 SGKMGLALAEAAYKRGADVTLITGPVSLL---TP-----------PGV--KSIKVSTAEEMLEAALNELAKDFDIFISAA 273 (390)
T ss_pred cchHHHHHHHHHHHCCCEEEEeCCCCccC---CC-----------CCc--EEEEeccHHHHHHHHHHhhcccCCEEEEcc
Confidence 57899999999999999999999765431 10 122 45788888777 444422 2689999999
Q ss_pred CCC
Q 029198 81 GRE 83 (197)
Q Consensus 81 ~~~ 83 (197)
+..
T Consensus 274 avs 276 (390)
T TIGR00521 274 AVA 276 (390)
T ss_pred ccc
Confidence 975
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0028 Score=48.20 Aligned_cols=63 Identities=17% Similarity=0.074 Sum_probs=52.8
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|+|-+|+.++=++.+.|.+|++++|-......+. ...-+..|..|.+++++++++.+||+|+-
T Consensus 19 GSGELGKEvaIe~QRLG~eViAVDrY~~APAmqV-------------Ahrs~Vi~MlD~~al~avv~rekPd~IVp 81 (394)
T COG0027 19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQV-------------AHRSYVIDMLDGDALRAVVEREKPDYIVP 81 (394)
T ss_pred cCCccchHHHHHHHhcCCEEEEecCcCCChhhhh-------------hhheeeeeccCHHHHHHHHHhhCCCeeee
Confidence 6899999999999999999999999877633222 23445679999999999999999999994
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0044 Score=48.54 Aligned_cols=64 Identities=17% Similarity=0.239 Sum_probs=40.9
Q ss_pred CCcccchHHHHHHHHHHCCC---eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
+||||++|..|++.|.+++| ++.++++....... +. ..+......|+.+. .++ ++|+||
T Consensus 7 vGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~-l~----------~~g~~i~v~d~~~~-----~~~--~vDvVf 68 (334)
T PRK14874 7 VGATGAVGREMLNILEERNFPVDKLRLLASARSAGKE-LS----------FKGKELKVEDLTTF-----DFS--GVDIAL 68 (334)
T ss_pred ECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCe-ee----------eCCceeEEeeCCHH-----HHc--CCCEEE
Confidence 59999999999999999876 56888776544221 11 01123333444432 234 789999
Q ss_pred eccCC
Q 029198 78 DINGR 82 (197)
Q Consensus 78 ~~a~~ 82 (197)
.+++.
T Consensus 69 ~A~g~ 73 (334)
T PRK14874 69 FSAGG 73 (334)
T ss_pred ECCCh
Confidence 87754
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.017 Score=45.31 Aligned_cols=103 Identities=16% Similarity=0.235 Sum_probs=64.8
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCC-----------CC-----chhhhhccCceE--EEeecCCCHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-----------ES-----DQEFAEFSSKIL--HLKGDRKDYDF 63 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-----------~~-----~~~~~~~~~~~~--~~~~d~~~~~~ 63 (197)
|+|.+|++++..|+..|. ++++++++.-+..+.-+. .. ..++.+.++.+. .+..+++ .+.
T Consensus 31 G~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~~~~-~~~ 109 (338)
T PRK12475 31 GAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVTDVT-VEE 109 (338)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEeccCC-HHH
Confidence 568899999999999996 899999986432221110 00 123344556554 4445554 456
Q ss_pred HHhhhhccCccEEEeccCCCccchHHHH-HhCC-CCCcEEEEecceecc
Q 029198 64 VKSSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 64 l~~~~~~~~~d~vi~~a~~~~~~~~~ll-~~~~-~~~~~v~~Ss~~vyg 110 (197)
+.++++ ++|+||.+... ..++-++ +.+. ....+|+.+..+.+|
T Consensus 110 ~~~~~~--~~DlVid~~D~--~~~r~~in~~~~~~~ip~i~~~~~g~~G 154 (338)
T PRK12475 110 LEELVK--EVDLIIDATDN--FDTRLLINDLSQKYNIPWIYGGCVGSYG 154 (338)
T ss_pred HHHHhc--CCCEEEEcCCC--HHHHHHHHHHHHHcCCCEEEEEecccEE
Confidence 777887 89999988742 2334333 4444 445778877766655
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0031 Score=48.79 Aligned_cols=29 Identities=28% Similarity=0.527 Sum_probs=26.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|.+|..++..|++.|++|++++|+++.
T Consensus 9 G~G~mG~~iA~~la~~G~~V~v~d~~~~~ 37 (308)
T PRK06129 9 GAGLIGRAWAIVFARAGHEVRLWDADPAA 37 (308)
T ss_pred CccHHHHHHHHHHHHCCCeeEEEeCCHHH
Confidence 48999999999999999999999998754
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.012 Score=42.75 Aligned_cols=106 Identities=15% Similarity=0.101 Sum_probs=65.9
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCC---------C-----CchhhhhccCceEEEeecC-CCHHHHHh
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG---------E-----SDQEFAEFSSKILHLKGDR-KDYDFVKS 66 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---------~-----~~~~~~~~~~~~~~~~~d~-~~~~~l~~ 66 (197)
|+|.+|++++..|+..|. ++++++.+.-+..+..+. . ...++.+.++.+.+...+- .+.+.+.+
T Consensus 28 G~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i~~~~~~~ 107 (202)
T TIGR02356 28 GAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERVTAENLEL 107 (202)
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcCCHHHHHH
Confidence 679999999999999995 899999874332211110 0 0123445556555544322 24456777
Q ss_pred hhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecceeccc
Q 029198 67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK 111 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~ 111 (197)
.++ ++|+||.+... ...-..+-+.++ ....+|+.+..+.+|.
T Consensus 108 ~~~--~~D~Vi~~~d~-~~~r~~l~~~~~~~~ip~i~~~~~g~~G~ 150 (202)
T TIGR02356 108 LIN--NVDLVLDCTDN-FATRYLINDACVALGTPLISAAVVGFGGQ 150 (202)
T ss_pred HHh--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEEeccCeEE
Confidence 777 89999987643 222233445556 5567888887666663
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.021 Score=42.55 Aligned_cols=105 Identities=13% Similarity=0.110 Sum_probs=67.7
Q ss_pred cccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCC---------C-----chhhhhccCceEEEeecC-CCHHHHHh
Q 029198 3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGE---------S-----DQEFAEFSSKILHLKGDR-KDYDFVKS 66 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~---------~-----~~~~~~~~~~~~~~~~d~-~~~~~l~~ 66 (197)
|.|.+|+.++..|+..| -++++++...-+..+..+.. . ..++.+.++.+.+...+- .+.+.+.+
T Consensus 31 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i~~~~~~~ 110 (240)
T TIGR02355 31 GLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKLDDAELAA 110 (240)
T ss_pred CcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccCCHHHHHH
Confidence 67999999999999999 48888888765432211100 0 123445667666555432 24556777
Q ss_pred hhhccCccEEEeccCCCccchHH-HHHhCC-CCCcEEEEecceeccc
Q 029198 67 SLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYLK 111 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~-ll~~~~-~~~~~v~~Ss~~vyg~ 111 (197)
+++ ++|+||.+... . .++. +-+++. ....+|+.++.+.+|.
T Consensus 111 ~~~--~~DlVvd~~D~-~-~~r~~ln~~~~~~~ip~v~~~~~g~~G~ 153 (240)
T TIGR02355 111 LIA--EHDIVVDCTDN-V-EVRNQLNRQCFAAKVPLVSGAAIRMEGQ 153 (240)
T ss_pred Hhh--cCCEEEEcCCC-H-HHHHHHHHHHHHcCCCEEEEEecccEeE
Confidence 787 89999988743 2 3444 445555 5568888776666654
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.019 Score=44.99 Aligned_cols=105 Identities=19% Similarity=0.254 Sum_probs=65.7
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCC-----------CC-----chhhhhccCce--EEEeecCCCHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-----------ES-----DQEFAEFSSKI--LHLKGDRKDYDF 63 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-----------~~-----~~~~~~~~~~~--~~~~~d~~~~~~ 63 (197)
|+|.+|++++..|++.|. ++.++++..-+..+..+. .. ...+.+.++.+ +.+..+++ .+.
T Consensus 31 G~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~~~~-~~~ 109 (339)
T PRK07688 31 GAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQDVT-AEE 109 (339)
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEeccCC-HHH
Confidence 569999999999999997 999999975332211110 00 12334445554 34444554 455
Q ss_pred HHhhhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecceeccc
Q 029198 64 VKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK 111 (197)
Q Consensus 64 l~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~ 111 (197)
+.++++ ++|+||.+.. +...-..+-+++. ....+|+.++.+.||.
T Consensus 110 ~~~~~~--~~DlVid~~D-n~~~r~~ln~~~~~~~iP~i~~~~~g~~G~ 155 (339)
T PRK07688 110 LEELVT--GVDLIIDATD-NFETRFIVNDAAQKYGIPWIYGACVGSYGL 155 (339)
T ss_pred HHHHHc--CCCEEEEcCC-CHHHHHHHHHHHHHhCCCEEEEeeeeeeeE
Confidence 667777 8999998864 2222233445555 4467888887777663
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0037 Score=45.55 Aligned_cols=138 Identities=16% Similarity=0.137 Sum_probs=79.6
Q ss_pred CCcccchHHHHHHHHHHCCCe--EEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhh-----ccCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-----AKGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~-----~~~~ 73 (197)
||++-.+|..++..+.+++.+ +.+..|..... ..+. ...........+|+.+..-+.+..+ .-.-
T Consensus 12 TGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~-~~L~-------v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr 83 (253)
T KOG1204|consen 12 TGASRGIGTGSVATILAEDDEALRYGVARLLAEL-EGLK-------VAYGDDFVHVVGDITEEQLLGALREAPRKKGGKR 83 (253)
T ss_pred ecCCCCccHHHHHHHHhcchHHHHHhhhcccccc-cceE-------EEecCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence 799999999999999998864 44444443331 1110 0001122333344444333333322 1268
Q ss_pred cEEEeccCCCccc---------------------------hHHHHHhCC-C--CCcEEEEecceecccCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE---------------------------VEPILDALP-N--LEQFIYCSSAGVYLKSDLLPHCETDTV 123 (197)
Q Consensus 74 d~vi~~a~~~~~~---------------------------~~~ll~~~~-~--~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 123 (197)
|.|||+||...+- ....+..++ . .+.+|++||...-. +.
T Consensus 84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~-----------p~ 152 (253)
T KOG1204|consen 84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR-----------PF 152 (253)
T ss_pred eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc-----------cc
Confidence 9999999973110 223455555 3 47899999855421 11
Q ss_pred CCCCcc-hhhhhHHHHHh-----hc-CCcEEEEccceeeCC
Q 029198 124 DPKSRH-KGKLNTESVLE-----SK-GVNWTSLRPVYIYGP 157 (197)
Q Consensus 124 ~~~~~~-~~k~~~e~~~~-----~~-~~~~~i~r~~~i~g~ 157 (197)
.....| .+|.+.+.+++ ++ ++.+..++||.+=.+
T Consensus 153 ~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~ 193 (253)
T KOG1204|consen 153 SSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQ 193 (253)
T ss_pred cHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccch
Confidence 122336 78888887763 43 788899999987543
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.034 Score=40.76 Aligned_cols=73 Identities=16% Similarity=0.188 Sum_probs=52.9
Q ss_pred cchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccEEEec
Q 029198 5 RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDVVYDI 79 (197)
Q Consensus 5 G~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~vi~~ 79 (197)
--++..+++.|.+.|.++......+.- .+.. .++.+......+++||..+.+++.+++.. -..|.++|+
T Consensus 18 rSIAwGIAk~l~~~GAeL~fTy~~e~l-~krv-----~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHs 91 (259)
T COG0623 18 RSIAWGIAKALAEQGAELAFTYQGERL-EKRV-----EELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHS 91 (259)
T ss_pred ccHHHHHHHHHHHcCCEEEEEeccHHH-HHHH-----HHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEE
Confidence 357899999999999999888877622 2211 12222233456799999999988888753 279999999
Q ss_pred cCCC
Q 029198 80 NGRE 83 (197)
Q Consensus 80 a~~~ 83 (197)
.+..
T Consensus 92 IaFa 95 (259)
T COG0623 92 IAFA 95 (259)
T ss_pred eccC
Confidence 8874
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0073 Score=41.15 Aligned_cols=104 Identities=15% Similarity=0.123 Sum_probs=63.4
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCC---------CCC-----chhhhhccCceEEEe--ecCCCHHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP---------GES-----DQEFAEFSSKILHLK--GDRKDYDFVK 65 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---------~~~-----~~~~~~~~~~~~~~~--~d~~~~~~l~ 65 (197)
|+|.+|+++++.|+..|. ++++++...-...+..+ +.. ...+.+.++.+++.. .++.+. ...
T Consensus 6 G~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~~-~~~ 84 (143)
T cd01483 6 GLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISED-NLD 84 (143)
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecChh-hHH
Confidence 569999999999999996 79999887433221111 000 123334455554443 344333 335
Q ss_pred hhhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecceecc
Q 029198 66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
..++ ++|+||.+... ......+.+.++ ....++..++.+.+|
T Consensus 85 ~~~~--~~diVi~~~d~-~~~~~~l~~~~~~~~i~~i~~~~~g~~g 127 (143)
T cd01483 85 DFLD--GVDLVIDAIDN-IAVRRALNRACKELGIPVIDAGGLGLGG 127 (143)
T ss_pred HHhc--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEcCCCcEE
Confidence 5666 89999988764 334445667777 556777777765443
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.033 Score=40.29 Aligned_cols=97 Identities=13% Similarity=0.151 Sum_probs=57.6
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecC---CCCccCCCCCC--C--------chhhhhccCce--EEEeecCCCHHHHHh
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRG---KAPIAQQLPGE--S--------DQEFAEFSSKI--LHLKGDRKDYDFVKS 66 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~---~~~~~~~~~~~--~--------~~~~~~~~~~~--~~~~~d~~~~~~l~~ 66 (197)
|+|.+|+.++..|++.|. ++++++++ .+...++.... . ...+...++.+ +.+..+++ .+.+.+
T Consensus 28 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~i~-~~~~~~ 106 (200)
T TIGR02354 28 GLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEKIT-EENIDK 106 (200)
T ss_pred CcCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeeeCC-HhHHHH
Confidence 568999999999999997 79999998 44433221100 0 11223444544 34444554 456777
Q ss_pred hhhccCccEEEeccCCCccchHH-HHHhCC---CCCcEEEEe
Q 029198 67 SLSAKGFDVVYDINGREADEVEP-ILDALP---NLEQFIYCS 104 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~-ll~~~~---~~~~~v~~S 104 (197)
+++ ++|+||.+. .+ ..++. +.+.+. +...++..|
T Consensus 107 ~~~--~~DlVi~a~-Dn-~~~k~~l~~~~~~~~~~~~ii~~~ 144 (200)
T TIGR02354 107 FFK--DADIVCEAF-DN-AEAKAMLVNAVLEKYKDKYLIAAS 144 (200)
T ss_pred Hhc--CCCEEEECC-CC-HHHHHHHHHHHHHHcCCCcEEEEe
Confidence 787 899999883 33 33443 344443 334445433
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0062 Score=49.62 Aligned_cols=67 Identities=15% Similarity=0.276 Sum_probs=52.8
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhh-hhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~~~d~vi~~a~ 81 (197)
|.|.+|.++++.|.+.|++|++++++++...... + ..++.++.+|..+.+.+.++ ++ ++|.|+-+..
T Consensus 7 G~G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~---------~-~~~~~~~~gd~~~~~~l~~~~~~--~a~~vi~~~~ 74 (453)
T PRK09496 7 GAGQVGYTLAENLSGENNDVTVIDTDEERLRRLQ---------D-RLDVRTVVGNGSSPDVLREAGAE--DADLLIAVTD 74 (453)
T ss_pred CCCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH---------h-hcCEEEEEeCCCCHHHHHHcCCC--cCCEEEEecC
Confidence 3499999999999999999999999876532111 0 13578999999999988888 66 8999987654
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0027 Score=41.50 Aligned_cols=67 Identities=18% Similarity=0.211 Sum_probs=51.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
|.|.+|..+++.|.+.+.+|++++++++...... ..++.++.+|..+++.++++-- .+++.|+-+..
T Consensus 5 G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-----------~~~~~~i~gd~~~~~~l~~a~i-~~a~~vv~~~~ 71 (116)
T PF02254_consen 5 GYGRIGREIAEQLKEGGIDVVVIDRDPERVEELR-----------EEGVEVIYGDATDPEVLERAGI-EKADAVVILTD 71 (116)
T ss_dssp S-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-----------HTTSEEEES-TTSHHHHHHTTG-GCESEEEEESS
T ss_pred cCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-----------hcccccccccchhhhHHhhcCc-cccCEEEEccC
Confidence 5689999999999997779999999876632211 2358899999999999988743 28888887665
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0071 Score=47.45 Aligned_cols=64 Identities=16% Similarity=0.227 Sum_probs=39.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEE---EEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVT---LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
+||||++|..|++.|.+++|.+. .+++...... .+. ..+......|+. . ..++ ++|+||
T Consensus 5 vGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~-~~~----------~~~~~~~~~~~~-~----~~~~--~~D~v~ 66 (339)
T TIGR01296 5 VGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGR-KVT----------FKGKELEVNEAK-I----ESFE--GIDIAL 66 (339)
T ss_pred EcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCC-eee----------eCCeeEEEEeCC-h----HHhc--CCCEEE
Confidence 59999999999999999887543 4446543321 111 012334444443 1 2234 788888
Q ss_pred eccCC
Q 029198 78 DINGR 82 (197)
Q Consensus 78 ~~a~~ 82 (197)
.+++.
T Consensus 67 ~a~g~ 71 (339)
T TIGR01296 67 FSAGG 71 (339)
T ss_pred ECCCH
Confidence 87765
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.029 Score=41.43 Aligned_cols=105 Identities=14% Similarity=0.166 Sum_probs=65.0
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCC---------CCC-----chhhhhccCceE--EEeecCCCHHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP---------GES-----DQEFAEFSSKIL--HLKGDRKDYDFVK 65 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---------~~~-----~~~~~~~~~~~~--~~~~d~~~~~~l~ 65 (197)
|+|.+|++++..|+..|. ++++++...-+..+..+ +.. ...+.+.++.+. .+...+ +.+.+.
T Consensus 28 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i-~~~~~~ 106 (228)
T cd00757 28 GAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL-DAENAE 106 (228)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee-CHHHHH
Confidence 679999999999999995 88888776433221111 000 123344555444 444444 456677
Q ss_pred hhhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecceeccc
Q 029198 66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK 111 (197)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~ 111 (197)
++++ ++|+||.+... ...-..+-+.++ ....+|+.+..+.+|.
T Consensus 107 ~~~~--~~DvVi~~~d~-~~~r~~l~~~~~~~~ip~i~~g~~g~~g~ 150 (228)
T cd00757 107 ELIA--GYDLVLDCTDN-FATRYLINDACVKLGKPLVSGAVLGFEGQ 150 (228)
T ss_pred HHHh--CCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEEEeccCEEE
Confidence 7777 89999988753 232333455555 5568888877666553
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0099 Score=42.04 Aligned_cols=105 Identities=14% Similarity=0.150 Sum_probs=62.9
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCC---ccCCCCC-----CC-----chhhhhccCceEEE--eecCCCHHHHHh
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP---IAQQLPG-----ES-----DQEFAEFSSKILHL--KGDRKDYDFVKS 66 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~---~~~~~~~-----~~-----~~~~~~~~~~~~~~--~~d~~~~~~l~~ 66 (197)
|+|.+|+.++..|++.|. ++++++...-+ ..+++.. .. ..++.+.++.+++. ...+. .+.+.+
T Consensus 6 G~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-~~~~~~ 84 (174)
T cd01487 6 GAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-ENNLEG 84 (174)
T ss_pred CcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-hhhHHH
Confidence 579999999999999996 69999997522 1111110 00 12333445555443 33343 455677
Q ss_pred hhhccCccEEEeccCCCccchHHHHHhCC-C-CCcEEEEecceeccc
Q 029198 67 SLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVYLK 111 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~-~~~~v~~Ss~~vyg~ 111 (197)
.++ ++|+||.+.. +...-..+.+.+. . ...+|+.+..+.|+.
T Consensus 85 ~l~--~~DlVi~~~d-~~~~r~~i~~~~~~~~~ip~i~~~~~~~~~~ 128 (174)
T cd01487 85 LFG--DCDIVVEAFD-NAETKAMLAESLLGNKNKPVVCASGMAGFGD 128 (174)
T ss_pred Hhc--CCCEEEECCC-CHHHHHHHHHHHHHHCCCCEEEEehhhccCC
Confidence 787 8999998843 3222233555555 3 567776655555554
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.016 Score=47.21 Aligned_cols=90 Identities=26% Similarity=0.346 Sum_probs=61.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|..+++.|.+.|++|++++++++.... +.+...++.++.+|..+++.+.++-- .++|.||-+...
T Consensus 238 G~G~~g~~l~~~L~~~~~~v~vid~~~~~~~~---------~~~~~~~~~~i~gd~~~~~~L~~~~~-~~a~~vi~~~~~ 307 (453)
T PRK09496 238 GGGNIGYYLAKLLEKEGYSVKLIERDPERAEE---------LAEELPNTLVLHGDGTDQELLEEEGI-DEADAFIALTND 307 (453)
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHH---------HHHHCCCCeEEECCCCCHHHHHhcCC-ccCCEEEECCCC
Confidence 45999999999999999999999998765321 11112367789999999998876543 288999865543
Q ss_pred CccchHHHHHh--CC--CCCcEEEEec
Q 029198 83 EADEVEPILDA--LP--NLEQFIYCSS 105 (197)
Q Consensus 83 ~~~~~~~ll~~--~~--~~~~~v~~Ss 105 (197)
. ..|++-. ++ +..+++....
T Consensus 308 ~---~~n~~~~~~~~~~~~~~ii~~~~ 331 (453)
T PRK09496 308 D---EANILSSLLAKRLGAKKVIALVN 331 (453)
T ss_pred c---HHHHHHHHHHHHhCCCeEEEEEC
Confidence 2 3333322 23 5556665554
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.011 Score=39.02 Aligned_cols=92 Identities=18% Similarity=0.182 Sum_probs=47.8
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
+||||++|+.|++.|.+.- .++..+..++.+.-+.+... ........-...+-.+.+.+ . ++|+||.|
T Consensus 5 vGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~----~--~~Dvvf~a 73 (121)
T PF01118_consen 5 VGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEV-----FPHPKGFEDLSVEDADPEEL----S--DVDVVFLA 73 (121)
T ss_dssp ESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHT-----TGGGTTTEEEBEEETSGHHH----T--TESEEEE-
T ss_pred ECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehh-----ccccccccceeEeecchhHh----h--cCCEEEec
Confidence 5999999999999999964 46666555544211111100 00001122222211344433 4 99999988
Q ss_pred cCCCccchHHHHHhCC-CCCcEEEEec
Q 029198 80 NGREADEVEPILDALP-NLEQFIYCSS 105 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~-~~~~~v~~Ss 105 (197)
... .....+...+. ...++|=+|+
T Consensus 74 ~~~--~~~~~~~~~~~~~g~~ViD~s~ 98 (121)
T PF01118_consen 74 LPH--GASKELAPKLLKAGIKVIDLSG 98 (121)
T ss_dssp SCH--HHHHHHHHHHHHTTSEEEESSS
T ss_pred Cch--hHHHHHHHHHhhCCcEEEeCCH
Confidence 653 23344444443 3236666665
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.038 Score=37.22 Aligned_cols=104 Identities=15% Similarity=0.184 Sum_probs=65.5
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCC---------CC-----chhhhhccCceEE--EeecCCCHHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG---------ES-----DQEFAEFSSKILH--LKGDRKDYDFVK 65 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---------~~-----~~~~~~~~~~~~~--~~~d~~~~~~l~ 65 (197)
|+|.+|+.++..|...|. ++++++...-+..+..+- .. ...+.+.++.+++ +..++ +.+...
T Consensus 9 G~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~-~~~~~~ 87 (135)
T PF00899_consen 9 GAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI-DEENIE 87 (135)
T ss_dssp STSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC-SHHHHH
T ss_pred CcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc-cccccc
Confidence 679999999999999996 899999875432221110 00 1123445555444 44444 456677
Q ss_pred hhhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecceecc
Q 029198 66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
++++ ++|+||.+... ......+-+.++ ....+|..++.+.+|
T Consensus 88 ~~~~--~~d~vi~~~d~-~~~~~~l~~~~~~~~~p~i~~~~~g~~G 130 (135)
T PF00899_consen 88 ELLK--DYDIVIDCVDS-LAARLLLNEICREYGIPFIDAGVNGFYG 130 (135)
T ss_dssp HHHH--TSSEEEEESSS-HHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred cccc--CCCEEEEecCC-HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence 8887 99999988654 233334556666 556788877666554
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0074 Score=47.50 Aligned_cols=93 Identities=16% Similarity=0.118 Sum_probs=50.9
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEE-ecCCCCccCCCCCCCchhhhhccCceEEE-eecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
+||||++|..+++.|.+. +.++..+ ++.+... +.+. +..+.+... ..++.+. +..++.+ ++|+||
T Consensus 6 iGATG~vG~ellr~L~~hP~~el~~l~~s~~sag-k~~~--------~~~~~l~~~~~~~~~~~-~~~~~~~--~~DvVf 73 (346)
T TIGR01850 6 VGASGYTGGELLRLLLNHPEVEITYLVSSRESAG-KPVS--------EVHPHLRGLVDLNLEPI-DEEEIAE--DADVVF 73 (346)
T ss_pred ECCCCHHHHHHHHHHHcCCCceEEEEeccchhcC-CChH--------HhCccccccCCceeecC-CHHHhhc--CCCEEE
Confidence 599999999999999977 5688855 5433221 1110 001111111 1112211 1223334 799999
Q ss_pred eccCCCccchHHHHHhCC-CCCcEEEEecce
Q 029198 78 DINGREADEVEPILDALP-NLEQFIYCSSAG 107 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~ 107 (197)
.|... .....+...+. .-+++|-.|+..
T Consensus 74 ~alP~--~~s~~~~~~~~~~G~~VIDlS~~f 102 (346)
T TIGR01850 74 LALPH--GVSAELAPELLAAGVKVIDLSADF 102 (346)
T ss_pred ECCCc--hHHHHHHHHHHhCCCEEEeCChhh
Confidence 87753 23445555543 336888888754
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.039 Score=40.32 Aligned_cols=105 Identities=13% Similarity=0.157 Sum_probs=62.9
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCcc---CCCC-----CC-----CchhhhhccCceEE--EeecCCCHHHHHh
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIA---QQLP-----GE-----SDQEFAEFSSKILH--LKGDRKDYDFVKS 66 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~---~~~~-----~~-----~~~~~~~~~~~~~~--~~~d~~~~~~l~~ 66 (197)
|+|.+|+.++..|+..|. ++++++.+.-+.. ++.. +. ...++.+.++.+.+ +...+. .+.+.+
T Consensus 35 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~-~~~~~~ 113 (212)
T PRK08644 35 GAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKID-EDNIEE 113 (212)
T ss_pred CcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeecC-HHHHHH
Confidence 579999999999999995 6999998742221 1110 00 01123344555444 333443 345667
Q ss_pred hhhccCccEEEeccCCCccchHHHHHhCC-C-CCcEEEEecceeccc
Q 029198 67 SLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVYLK 111 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~-~~~~v~~Ss~~vyg~ 111 (197)
.++ ++|+||.+.- +...-..+.+.+. . ...+|+.+..+-|+.
T Consensus 114 ~~~--~~DvVI~a~D-~~~~r~~l~~~~~~~~~~p~I~~~~~~~~~~ 157 (212)
T PRK08644 114 LFK--DCDIVVEAFD-NAETKAMLVETVLEHPGKKLVAASGMAGYGD 157 (212)
T ss_pred HHc--CCCEEEECCC-CHHHHHHHHHHHHHhCCCCEEEeehhhccCC
Confidence 777 8999998843 3233334556666 4 567887765555544
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.0072 Score=50.70 Aligned_cols=67 Identities=10% Similarity=0.140 Sum_probs=52.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
|.|.+|+++++.|.++|++|++++++++..++. . ..+...+.+|.+|++.++++-- .++|.++-+..
T Consensus 424 G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~---------~--~~g~~~i~GD~~~~~~L~~a~i-~~a~~viv~~~ 490 (558)
T PRK10669 424 GYGRVGSLLGEKLLAAGIPLVVIETSRTRVDEL---------R--ERGIRAVLGNAANEEIMQLAHL-DCARWLLLTIP 490 (558)
T ss_pred CCChHHHHHHHHHHHCCCCEEEEECCHHHHHHH---------H--HCCCeEEEcCCCCHHHHHhcCc-cccCEEEEEcC
Confidence 679999999999999999999999987663211 1 2468899999999998887643 28888875554
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.0083 Score=45.95 Aligned_cols=84 Identities=19% Similarity=0.222 Sum_probs=54.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|.+|++.+|+++..... .+ .+... ...+++.+.+. +.|+||++...
T Consensus 158 G~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~---------~~--~g~~~-----~~~~~l~~~l~--~aDiVint~P~ 219 (287)
T TIGR02853 158 GFGRTGMTIARTFSALGARVFVGARSSADLARI---------TE--MGLIP-----FPLNKLEEKVA--EIDIVINTIPA 219 (287)
T ss_pred cChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HH--CCCee-----ecHHHHHHHhc--cCCEEEECCCh
Confidence 458899999999999999999999986542110 00 11111 12445667777 89999998643
Q ss_pred CccchHHHHHhCCCCCcEEEEec
Q 029198 83 EADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
... ....++.++...-++.++|
T Consensus 220 ~ii-~~~~l~~~k~~aliIDlas 241 (287)
T TIGR02853 220 LVL-TADVLSKLPKHAVIIDLAS 241 (287)
T ss_pred HHh-CHHHHhcCCCCeEEEEeCc
Confidence 321 2445666664346666665
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0027 Score=44.32 Aligned_cols=93 Identities=18% Similarity=0.183 Sum_probs=47.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCC--CchhhhhccCceEEEeecCCCHHHHHhhhhc-------cCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF 73 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-------~~~ 73 (197)
|.|-+|+.+++.|++.|++|++.+|++++........ ......+...+..++..-+.+.+++++++.. ..-
T Consensus 8 GlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~~~l~~g 87 (163)
T PF03446_consen 8 GLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENILAGLRPG 87 (163)
T ss_dssp --SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHGGGS-TT
T ss_pred chHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHhhccccc
Confidence 5699999999999999999999999876532211100 0000111112223333334555555544432 134
Q ss_pred cEEEeccCCCccchHHHHHhCC
Q 029198 74 DVVYDINGREADEVEPILDALP 95 (197)
Q Consensus 74 d~vi~~a~~~~~~~~~ll~~~~ 95 (197)
.++|+++.......+.+.+.+.
T Consensus 88 ~iiid~sT~~p~~~~~~~~~~~ 109 (163)
T PF03446_consen 88 KIIIDMSTISPETSRELAERLA 109 (163)
T ss_dssp EEEEE-SS--HHHHHHHHHHHH
T ss_pred eEEEecCCcchhhhhhhhhhhh
Confidence 4555555555444555555544
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.016 Score=44.55 Aligned_cols=94 Identities=15% Similarity=0.163 Sum_probs=62.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+|+.| +|+-=++...+-|++|++++++..+.+..+.. -+.+++..-..|++.+.++.+ ..|.++|+.
T Consensus 188 ~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~----------LGAd~fv~~~~d~d~~~~~~~--~~dg~~~~v 254 (360)
T KOG0023|consen 188 VGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKS----------LGADVFVDSTEDPDIMKAIMK--TTDGGIDTV 254 (360)
T ss_pred ecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHh----------cCcceeEEecCCHHHHHHHHH--hhcCcceee
Confidence 35656 77666666666699999999997664432221 245555555568888888877 555555554
Q ss_pred CC-CccchHHHHHhCCCCCcEEEEecce
Q 029198 81 GR-EADEVEPILDALPNLEQFIYCSSAG 107 (197)
Q Consensus 81 ~~-~~~~~~~ll~~~~~~~~~v~~Ss~~ 107 (197)
.. .....+.++..++...++|.++-..
T Consensus 255 ~~~a~~~~~~~~~~lk~~Gt~V~vg~p~ 282 (360)
T KOG0023|consen 255 SNLAEHALEPLLGLLKVNGTLVLVGLPE 282 (360)
T ss_pred eeccccchHHHHHHhhcCCEEEEEeCcC
Confidence 31 3457888999999556888888533
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.011 Score=45.79 Aligned_cols=92 Identities=12% Similarity=0.140 Sum_probs=49.2
Q ss_pred CCcccchHHHHHHHHHHCCC---eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
+||||.||+.+++.|.++.. .+..+...++...+ ...+..-.+.-++...+......+|+++
T Consensus 7 vGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~---------------~~~f~~~~~~v~~~~~~~~~~~~~Divf 71 (334)
T COG0136 7 LGATGAVGQVLLELLEERHFPFEELVLLASARSAGKK---------------YIEFGGKSIGVPEDAADEFVFSDVDIVF 71 (334)
T ss_pred EeccchHHHHHHHHHHhcCCCcceEEEEecccccCCc---------------cccccCccccCccccccccccccCCEEE
Confidence 49999999999999999752 24444433332111 1222221122233223333223899999
Q ss_pred eccCCCccchHHHHHhCC--CCCcEEEEecceecccC
Q 029198 78 DINGREADEVEPILDALP--NLEQFIYCSSAGVYLKS 112 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~ 112 (197)
.+++... .+.+...+. + .+.++..+.|...
T Consensus 72 ~~ag~~~--s~~~~p~~~~~G---~~VIdnsSa~Rm~ 103 (334)
T COG0136 72 FAAGGSV--SKEVEPKAAEAG---CVVIDNSSAFRMD 103 (334)
T ss_pred EeCchHH--HHHHHHHHHHcC---CEEEeCCcccccC
Confidence 9997642 255555544 4 3444545555433
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.017 Score=45.49 Aligned_cols=94 Identities=19% Similarity=0.144 Sum_probs=52.7
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEE-eecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
+||||++|+.+++.|.+. +++++++.++.+. .+.+.. ..+.+... ..++.+.+.. .++ ++|+||.
T Consensus 8 iGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~-g~~l~~--------~~~~~~~~~~~~~~~~~~~--~~~--~vD~Vf~ 74 (343)
T PRK00436 8 VGASGYTGGELLRLLLNHPEVEIVAVTSRSSA-GKPLSD--------VHPHLRGLVDLVLEPLDPE--ILA--GADVVFL 74 (343)
T ss_pred ECCCCHHHHHHHHHHHcCCCceEEEEECcccc-CcchHH--------hCcccccccCceeecCCHH--Hhc--CCCEEEE
Confidence 599999999999999987 5788887774332 111110 01111111 1123333322 334 7999987
Q ss_pred ccCCCccchHHHHHhC-CCCCcEEEEecceec
Q 029198 79 INGREADEVEPILDAL-PNLEQFIYCSSAGVY 109 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~-~~~~~~v~~Ss~~vy 109 (197)
|... .....+...+ +.-+++|-.|+..-+
T Consensus 75 alP~--~~~~~~v~~a~~aG~~VID~S~~fR~ 104 (343)
T PRK00436 75 ALPH--GVSMDLAPQLLEAGVKVIDLSADFRL 104 (343)
T ss_pred CCCc--HHHHHHHHHHHhCCCEEEECCcccCC
Confidence 6643 2333444444 444688888875443
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.048 Score=40.78 Aligned_cols=103 Identities=17% Similarity=0.163 Sum_probs=63.7
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCC---------CCC-----chhhhhccCceEEEee--cCCCHHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP---------GES-----DQEFAEFSSKILHLKG--DRKDYDFVK 65 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---------~~~-----~~~~~~~~~~~~~~~~--d~~~~~~l~ 65 (197)
|.|.+|+.++..|+..|. ++++++...-+..+..+ +.. ..++.+.++.+++... .+ +.+.+.
T Consensus 39 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i-~~~~~~ 117 (245)
T PRK05690 39 GLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARL-DDDELA 117 (245)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccC-CHHHHH
Confidence 459999999999999994 88888887544322111 000 1234455666554443 33 345566
Q ss_pred hhhhccCccEEEeccCCCccchHH-HHHhCC-CCCcEEEEecceecc
Q 029198 66 SSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~-ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
++++ ++|+||.+.. +. ..+. +-++++ ....+|+.++.+.+|
T Consensus 118 ~~~~--~~DiVi~~~D-~~-~~r~~ln~~~~~~~ip~v~~~~~g~~G 160 (245)
T PRK05690 118 ALIA--GHDLVLDCTD-NV-ATRNQLNRACFAAKKPLVSGAAIRMEG 160 (245)
T ss_pred HHHh--cCCEEEecCC-CH-HHHHHHHHHHHHhCCEEEEeeeccCCc
Confidence 7777 8999998874 32 3344 445555 456777766555554
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.033 Score=42.52 Aligned_cols=106 Identities=12% Similarity=0.001 Sum_probs=65.2
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCC---------CC-----CchhhhhccCceEEEeec-CCCHHHHHh
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP---------GE-----SDQEFAEFSSKILHLKGD-RKDYDFVKS 66 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---------~~-----~~~~~~~~~~~~~~~~~d-~~~~~~l~~ 66 (197)
|+|.+|+.++..|+..|. ++.+++...-+..+..+ +. ...++.+.++.+++...+ ..+++.+.+
T Consensus 34 G~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~l~~~n~~~ 113 (287)
T PRK08223 34 GLGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEGIGKENADA 113 (287)
T ss_pred CCCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEecccCccCHHH
Confidence 679999999999999994 88888887544322111 00 122445667766555443 223455677
Q ss_pred hhhccCccEEEeccCCCccchHH-HHHhCC-CCCcEEEEecceecc
Q 029198 67 SLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~-ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
+++ ++|+|+.+.-.....++. +-++|+ ....+|+.+..+..|
T Consensus 114 ll~--~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~~~~g~~g 157 (287)
T PRK08223 114 FLD--GVDVYVDGLDFFEFDARRLVFAACQQRGIPALTAAPLGMGT 157 (287)
T ss_pred HHh--CCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEEeccCCeE
Confidence 787 899999766321113444 445566 556778776655444
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.072 Score=42.15 Aligned_cols=103 Identities=12% Similarity=0.063 Sum_probs=65.5
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCC--------------CchhhhhccCceEEEe--ecCCCHHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILHLK--GDRKDYDFVK 65 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~--~d~~~~~~l~ 65 (197)
|+|.+|++++..|+..|. ++++++...-...+..+.. ...++.+.++.+.+.. ..+. .+...
T Consensus 35 G~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i~-~~~~~ 113 (355)
T PRK05597 35 GAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRLT-WSNAL 113 (355)
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeecC-HHHHH
Confidence 679999999999999995 8899888754322211100 0123445666665444 3443 45566
Q ss_pred hhhhccCccEEEeccCCCccchHH-HHHhCC-CCCcEEEEecceecc
Q 029198 66 SSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~-ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
++++ ++|+||.+... ..++. +-+++. ....+|+.+..+.+|
T Consensus 114 ~~~~--~~DvVvd~~d~--~~~r~~~n~~c~~~~ip~v~~~~~g~~g 156 (355)
T PRK05597 114 DELR--DADVILDGSDN--FDTRHLASWAAARLGIPHVWASILGFDA 156 (355)
T ss_pred HHHh--CCCEEEECCCC--HHHHHHHHHHHHHcCCCEEEEEEecCeE
Confidence 6777 89999988753 23333 445555 556788887766655
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.0087 Score=40.42 Aligned_cols=69 Identities=16% Similarity=0.115 Sum_probs=44.1
Q ss_pred cccchHHHHHHHHHHCCCe-EEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
|+|..|+.++..|.+.|.+ |+++.|+.++... +.+..++..+-..++.+ +.+.+. .+|+||++.+
T Consensus 19 GaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~---------l~~~~~~~~~~~~~~~~---~~~~~~--~~DivI~aT~ 84 (135)
T PF01488_consen 19 GAGGAARAVAAALAALGAKEITIVNRTPERAEA---------LAEEFGGVNIEAIPLED---LEEALQ--EADIVINATP 84 (135)
T ss_dssp SSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHH---------HHHHHTGCSEEEEEGGG---HCHHHH--TESEEEE-SS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHH---------HHHHcCccccceeeHHH---HHHHHh--hCCeEEEecC
Confidence 4599999999999999975 9999998765321 11111222222333333 335666 8999999977
Q ss_pred CCcc
Q 029198 82 READ 85 (197)
Q Consensus 82 ~~~~ 85 (197)
....
T Consensus 85 ~~~~ 88 (135)
T PF01488_consen 85 SGMP 88 (135)
T ss_dssp TTST
T ss_pred CCCc
Confidence 6533
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.091 Score=39.81 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=64.2
Q ss_pred cccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCC--------------CCchhhhhccCceEEEeec-CCCHHHHHh
Q 029198 3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILHLKGD-RKDYDFVKS 66 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~d-~~~~~~l~~ 66 (197)
|.|.+|+++++.|++.| .++++++...-...+..+. ....++.+.++.+.+...+ ..+++...+
T Consensus 37 G~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~i~~e~~~~ 116 (268)
T PRK15116 37 GIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFITPDNVAE 116 (268)
T ss_pred CcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecccChhhHHH
Confidence 67999999999999999 6899999875443221110 1123445666766554443 335566666
Q ss_pred hhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecce
Q 029198 67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAG 107 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~ 107 (197)
++. .++|+||.+... ...-..+.+.++ ....+|.+.+.+
T Consensus 117 ll~-~~~D~VIdaiD~-~~~k~~L~~~c~~~~ip~I~~gGag 156 (268)
T PRK15116 117 YMS-AGFSYVIDAIDS-VRPKAALIAYCRRNKIPLVTTGGAG 156 (268)
T ss_pred Hhc-CCCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEECCcc
Confidence 663 279999988764 233345667777 445666554433
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.0058 Score=41.05 Aligned_cols=82 Identities=15% Similarity=0.181 Sum_probs=56.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|+| .|.+++..|.+.|++|++++.++....... ...+..+.+|+.+++. +.-+ ++|.|+.+- .
T Consensus 24 G~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-----------~~~~~~v~dDlf~p~~--~~y~--~a~liysir-p 86 (134)
T PRK04148 24 GIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-----------KLGLNAFVDDLFNPNL--EIYK--NAKLIYSIR-P 86 (134)
T ss_pred Eec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HhCCeEEECcCCCCCH--HHHh--cCCEEEEeC-C
Confidence 567 888899999999999999999987532111 1357899999998762 2233 778887544 3
Q ss_pred CccchHHHHHhCC--CCCcEE
Q 029198 83 EADEVEPILDALP--NLEQFI 101 (197)
Q Consensus 83 ~~~~~~~ll~~~~--~~~~~v 101 (197)
..+-...+++.++ +..-+|
T Consensus 87 p~el~~~~~~la~~~~~~~~i 107 (134)
T PRK04148 87 PRDLQPFILELAKKINVPLII 107 (134)
T ss_pred CHHHHHHHHHHHHHcCCCEEE
Confidence 3344556777777 444443
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.094 Score=38.87 Aligned_cols=105 Identities=19% Similarity=0.233 Sum_probs=66.7
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCC---------CC-C-----chhhhhccCceEEEe--ecCCCHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP---------GE-S-----DQEFAEFSSKILHLK--GDRKDYDFV 64 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---------~~-~-----~~~~~~~~~~~~~~~--~d~~~~~~l 64 (197)
|+|.+|++++..|+..|. ++++++...-+..+..+ +. . ..++.+.++.+.+.. ..+ +.+.+
T Consensus 34 G~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~~~-~~~~~ 112 (231)
T PRK08328 34 GVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVGRL-SEENI 112 (231)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEeccC-CHHHH
Confidence 679999999999999994 88888876544322111 00 0 012344456554443 334 45556
Q ss_pred HhhhhccCccEEEeccCCCccchHHHH-HhCC-CCCcEEEEecceecccC
Q 029198 65 KSSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYLKS 112 (197)
Q Consensus 65 ~~~~~~~~~d~vi~~a~~~~~~~~~ll-~~~~-~~~~~v~~Ss~~vyg~~ 112 (197)
.++++ ++|+||.+... ..++.++ ++++ ....+|+.++.+.+|..
T Consensus 113 ~~~l~--~~D~Vid~~d~--~~~r~~l~~~~~~~~ip~i~g~~~g~~G~v 158 (231)
T PRK08328 113 DEVLK--GVDVIVDCLDN--FETRYLLDDYAHKKGIPLVHGAVEGTYGQV 158 (231)
T ss_pred HHHHh--cCCEEEECCCC--HHHHHHHHHHHHHcCCCEEEEeeccCEEEE
Confidence 77777 89999988754 2344444 4455 55788888888777753
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.053 Score=42.09 Aligned_cols=83 Identities=14% Similarity=0.207 Sum_probs=52.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.||+.+++.|..-|++|++.++..+... ++..+ ...+++.++++ .+|+|+.+...
T Consensus 143 G~G~IG~~vA~~l~afG~~V~~~~~~~~~~~----------------~~~~~----~~~~~l~e~l~--~aDvvv~~lPl 200 (312)
T PRK15469 143 GAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP----------------GVQSF----AGREELSAFLS--QTRVLINLLPN 200 (312)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC----------------Cceee----cccccHHHHHh--cCCEEEECCCC
Confidence 6799999999999999999999998654311 11111 12345677777 78888866654
Q ss_pred CccchHH-----HHHhCCCCCcEEEEeccee
Q 029198 83 EADEVEP-----ILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~~~~~~-----ll~~~~~~~~~v~~Ss~~v 108 (197)
+ ..++. .++.|+.-.-+|+++=..+
T Consensus 201 t-~~T~~li~~~~l~~mk~ga~lIN~aRG~v 230 (312)
T PRK15469 201 T-PETVGIINQQLLEQLPDGAYLLNLARGVH 230 (312)
T ss_pred C-HHHHHHhHHHHHhcCCCCcEEEECCCccc
Confidence 3 33333 3444443345666664444
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.016 Score=45.40 Aligned_cols=87 Identities=15% Similarity=0.174 Sum_probs=47.1
Q ss_pred CCcccchHHHHHHHHHHCCC---eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
+||||++|..+++.|.+++| ++..+...+.. -+.+. ..+ ...++.+.+.. + ++ ++|+||
T Consensus 10 vGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~a-G~~l~----------~~~---~~l~~~~~~~~-~-~~--~vD~vF 71 (336)
T PRK05671 10 VGATGTVGEALVQILEERDFPVGTLHLLASSESA-GHSVP----------FAG---KNLRVREVDSF-D-FS--QVQLAF 71 (336)
T ss_pred EccCCHHHHHHHHHHhhCCCCceEEEEEECcccC-CCeec----------cCC---cceEEeeCChH-H-hc--CCCEEE
Confidence 59999999999999998776 44455443222 11111 011 11223222211 1 34 789998
Q ss_pred eccCCCccchHHHHHhCC-CCCcEEEEecce
Q 029198 78 DINGREADEVEPILDALP-NLEQFIYCSSAG 107 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~ 107 (197)
-+... .-...+++.+. ...++|=.|+..
T Consensus 72 la~p~--~~s~~~v~~~~~~G~~VIDlS~~f 100 (336)
T PRK05671 72 FAAGA--AVSRSFAEKARAAGCSVIDLSGAL 100 (336)
T ss_pred EcCCH--HHHHHHHHHHHHCCCeEEECchhh
Confidence 77653 22344555554 223566666544
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.04 Score=43.04 Aligned_cols=93 Identities=20% Similarity=0.242 Sum_probs=60.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC---HHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~l~~~~~~~~~d~vi 77 (197)
+||+|.||+..+..+.+.|+.+++.+.++++.. .+. +... -..+ |+.+ .+.++++..+.++|+|+
T Consensus 149 ~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~--------~lGA-d~vi--~y~~~~~~~~v~~~t~g~gvDvv~ 216 (326)
T COG0604 149 HGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLK--------ELGA-DHVI--NYREEDFVEQVRELTGGKGVDVVL 216 (326)
T ss_pred ecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHH--------hcCC-CEEE--cCCcccHHHHHHHHcCCCCceEEE
Confidence 589999999999999999977777777665532 111 1111 1122 2333 34455555555799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEecce
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~~ 107 (197)
++-|. ......+..++...+++.+....
T Consensus 217 D~vG~--~~~~~~l~~l~~~G~lv~ig~~~ 244 (326)
T COG0604 217 DTVGG--DTFAASLAALAPGGRLVSIGALS 244 (326)
T ss_pred ECCCH--HHHHHHHHHhccCCEEEEEecCC
Confidence 99875 35556777777337888777644
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.0081 Score=43.36 Aligned_cols=32 Identities=31% Similarity=0.325 Sum_probs=28.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
+||+|.+|+.|++.|.+.||+|++..|+.++.
T Consensus 6 i~GtGniG~alA~~~a~ag~eV~igs~r~~~~ 37 (211)
T COG2085 6 IIGTGNIGSALALRLAKAGHEVIIGSSRGPKA 37 (211)
T ss_pred EeccChHHHHHHHHHHhCCCeEEEecCCChhH
Confidence 48999999999999999999999998877653
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.018 Score=45.23 Aligned_cols=27 Identities=15% Similarity=0.274 Sum_probs=21.6
Q ss_pred CCcccchHHHHHHHHHHCCC---eEEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTR 27 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~---~V~~~~r 27 (197)
+||||++|..|++.|.+++| ++..++.
T Consensus 13 vGAtG~vG~eLlrlL~~~~hP~~~l~~las 42 (344)
T PLN02383 13 VGVTGAVGQEFLSVLTDRDFPYSSLKMLAS 42 (344)
T ss_pred EcCCChHHHHHHHHHHhCCCCcceEEEEEc
Confidence 49999999999999999877 4444433
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.058 Score=41.87 Aligned_cols=94 Identities=13% Similarity=0.228 Sum_probs=57.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeec-CCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD-RKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
+||+|.+|..++..+...|.+|+++++++++... + .+... -.++..+ ..+...........++|+|+++
T Consensus 145 ~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~-~--------~~lGa-~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~ 214 (325)
T TIGR02825 145 NAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAY-L--------KKLGF-DVAFNYKTVKSLEETLKKASPDGYDCYFDN 214 (325)
T ss_pred eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H--------HHcCC-CEEEeccccccHHHHHHHhCCCCeEEEEEC
Confidence 4889999999999888889999999987655221 1 11111 1122111 1122222222223479999998
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEecc
Q 029198 80 NGREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
.|. ......++.++...+++.++..
T Consensus 215 ~G~--~~~~~~~~~l~~~G~iv~~G~~ 239 (325)
T TIGR02825 215 VGG--EFSNTVIGQMKKFGRIAICGAI 239 (325)
T ss_pred CCH--HHHHHHHHHhCcCcEEEEecch
Confidence 874 3456778888755688877653
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.098 Score=38.77 Aligned_cols=101 Identities=14% Similarity=0.104 Sum_probs=60.9
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccC---CCC------CC-----CchhhhhccCceEEEeec-CCCHHHHHh
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQ---QLP------GE-----SDQEFAEFSSKILHLKGD-RKDYDFVKS 66 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~------~~-----~~~~~~~~~~~~~~~~~d-~~~~~~l~~ 66 (197)
|.|.+|+++++.|++.|. ++++++...-...+ ++. +. ...++.+.++.+.+...+ ..+++....
T Consensus 18 G~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~i~~~~~~~ 97 (231)
T cd00755 18 GLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEFLTPDNSED 97 (231)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeeecCHhHHHH
Confidence 679999999999999995 89998887533221 110 00 023445566666555443 223455555
Q ss_pred hhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEec
Q 029198 67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSS 105 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss 105 (197)
++. .++|+||.+... ......+.+.++ ....+|...+
T Consensus 98 l~~-~~~D~VvdaiD~-~~~k~~L~~~c~~~~ip~I~s~g 135 (231)
T cd00755 98 LLG-GDPDFVVDAIDS-IRAKVALIAYCRKRKIPVISSMG 135 (231)
T ss_pred Hhc-CCCCEEEEcCCC-HHHHHHHHHHHHHhCCCEEEEeC
Confidence 553 269999988753 233345667777 4445554433
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.03 Score=42.22 Aligned_cols=29 Identities=10% Similarity=0.050 Sum_probs=22.7
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCC
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGK 29 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~ 29 (197)
+|++|.+|+.+++.+.+. +.+++++....
T Consensus 7 iG~~G~mG~~i~~~l~~~~~~elvav~d~~ 36 (257)
T PRK00048 7 AGASGRMGRELIEAVEAAEDLELVAAVDRP 36 (257)
T ss_pred ECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 478899999999998865 67888755443
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.073 Score=41.28 Aligned_cols=29 Identities=31% Similarity=0.484 Sum_probs=25.8
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEecCC
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGK 29 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r~~ 29 (197)
+||||++|..++..|+..|+ +|+++++.+
T Consensus 6 iGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 6 IGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred ECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 58899999999999999985 699999954
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.066 Score=41.79 Aligned_cols=87 Identities=17% Similarity=0.182 Sum_probs=59.5
Q ss_pred ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCCC
Q 029198 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE 83 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~~ 83 (197)
.|.+|..-++.+...|.+|++++|++++.+.. .+ ...-.++.. .|++..+...+ .+|++|.+++
T Consensus 175 ~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a---------~~-lGAd~~i~~--~~~~~~~~~~~--~~d~ii~tv~-- 238 (339)
T COG1064 175 AGGLGHMAVQYAKAMGAEVIAITRSEEKLELA---------KK-LGADHVINS--SDSDALEAVKE--IADAIIDTVG-- 238 (339)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHH---------HH-hCCcEEEEc--CCchhhHHhHh--hCcEEEECCC--
Confidence 45788888877777899999999998874211 11 122233332 26666666655 4999999998
Q ss_pred ccchHHHHHhCCCCCcEEEEecc
Q 029198 84 ADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 84 ~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
.......+++++.-.+++.++-.
T Consensus 239 ~~~~~~~l~~l~~~G~~v~vG~~ 261 (339)
T COG1064 239 PATLEPSLKALRRGGTLVLVGLP 261 (339)
T ss_pred hhhHHHHHHHHhcCCEEEEECCC
Confidence 56778888888855677777643
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.0096 Score=40.56 Aligned_cols=31 Identities=23% Similarity=0.452 Sum_probs=27.4
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~ 31 (197)
+||+|.+|++++..|...+ .++++++++++.
T Consensus 6 iGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~ 38 (141)
T PF00056_consen 6 IGAAGNVGSTLALLLAQQGLADEIVLIDINEDK 38 (141)
T ss_dssp ESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHH
T ss_pred ECCCChHHHHHHHHHHhCCCCCceEEeccCccc
Confidence 5889999999999999987 589999998654
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.13 Score=37.10 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=62.4
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCC----C-----C-----CchhhhhccCceEEE--eecCCCHHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP----G-----E-----SDQEFAEFSSKILHL--KGDRKDYDFVK 65 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~----~-----~-----~~~~~~~~~~~~~~~--~~d~~~~~~l~ 65 (197)
|.|.+|.++++.|+..|. ++++++...-...+..+ . . ....+.+.++.+.+. ...+. +...
T Consensus 28 G~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~~~--~~~~ 105 (197)
T cd01492 28 GLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDDIS--EKPE 105 (197)
T ss_pred cCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecCcc--ccHH
Confidence 356699999999999995 78898887543221111 0 0 012345666655443 33343 2234
Q ss_pred hhhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecceecc
Q 029198 66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
+.++ ++|+||.+.. +......+-+.++ ....+++.++.+.+|
T Consensus 106 ~~~~--~~dvVi~~~~-~~~~~~~ln~~c~~~~ip~i~~~~~G~~G 148 (197)
T cd01492 106 EFFS--QFDVVVATEL-SRAELVKINELCRKLGVKFYATGVHGLFG 148 (197)
T ss_pred HHHh--CCCEEEECCC-CHHHHHHHHHHHHHcCCCEEEEEecCCEE
Confidence 5566 8999997654 3333344556666 446788888777665
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.022 Score=43.83 Aligned_cols=84 Identities=20% Similarity=0.250 Sum_probs=53.7
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|..++..|.+.|.+|++.+|++..... . .+ .+..++ ..+++.+.+. +.|+||++...
T Consensus 159 G~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~-~--------~~--~G~~~~-----~~~~l~~~l~--~aDiVI~t~p~ 220 (296)
T PRK08306 159 GFGRTGMTLARTLKALGANVTVGARKSAHLAR-I--------TE--MGLSPF-----HLSELAEEVG--KIDIIFNTIPA 220 (296)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-H--------HH--cCCeee-----cHHHHHHHhC--CCCEEEECCCh
Confidence 35889999999999999999999998654211 0 00 122222 2345666777 89999998643
Q ss_pred CccchHHHHHhCCCCCcEEEEec
Q 029198 83 EADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
. .-.+..++.++....++-+++
T Consensus 221 ~-~i~~~~l~~~~~g~vIIDla~ 242 (296)
T PRK08306 221 L-VLTKEVLSKMPPEALIIDLAS 242 (296)
T ss_pred h-hhhHHHHHcCCCCcEEEEEcc
Confidence 2 123455666664345665664
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.083 Score=40.87 Aligned_cols=92 Identities=17% Similarity=0.283 Sum_probs=58.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
+||+|.+|..++..+...|.+|+++++++++.. .+ .+. .--.++ |..+. +.+.+... .++|+|+
T Consensus 150 ~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~-~l--------~~~-Ga~~vi--~~~~~~~~~~v~~~~~-~gvd~vl 216 (329)
T cd08294 150 NGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVA-WL--------KEL-GFDAVF--NYKTVSLEEALKEAAP-DGIDCYF 216 (329)
T ss_pred ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH--------HHc-CCCEEE--eCCCccHHHHHHHHCC-CCcEEEE
Confidence 489999999999999999999999998765521 11 111 111222 22322 23333332 4799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEecce
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~~ 107 (197)
++.+. ......++.++...+++.+++..
T Consensus 217 d~~g~--~~~~~~~~~l~~~G~iv~~g~~~ 244 (329)
T cd08294 217 DNVGG--EFSSTVLSHMNDFGRVAVCGSIS 244 (329)
T ss_pred ECCCH--HHHHHHHHhhccCCEEEEEcchh
Confidence 98874 45567777777446788776543
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.11 Score=41.48 Aligned_cols=104 Identities=17% Similarity=0.116 Sum_probs=63.7
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCC---------CCC-----chhhhhccCceEEEeec-CCCHHHHHh
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP---------GES-----DQEFAEFSSKILHLKGD-RKDYDFVKS 66 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---------~~~-----~~~~~~~~~~~~~~~~d-~~~~~~l~~ 66 (197)
|+|.+|++++..|+..|. +++++++..-...+..+ +.. ..++.+.++.+.+...+ ..+.+.+.+
T Consensus 142 G~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~~~~~~~~ 221 (376)
T PRK08762 142 GAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERVTSDNVEA 221 (376)
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccCChHHHHH
Confidence 578999999999999996 89999987432211110 000 12334455655443332 223455667
Q ss_pred hhhccCccEEEeccCCCccchH-HHHHhCC-CCCcEEEEecceecc
Q 029198 67 SLSAKGFDVVYDINGREADEVE-PILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~-~ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
+++ ++|+||++.... .++ .+-++++ ....+|+.+..+.+|
T Consensus 222 ~~~--~~D~Vv~~~d~~--~~r~~ln~~~~~~~ip~i~~~~~g~~g 263 (376)
T PRK08762 222 LLQ--DVDVVVDGADNF--PTRYLLNDACVKLGKPLVYGAVFRFEG 263 (376)
T ss_pred HHh--CCCEEEECCCCH--HHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence 777 899999887542 234 3445566 556888887665554
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.035 Score=43.25 Aligned_cols=29 Identities=17% Similarity=0.095 Sum_probs=25.4
Q ss_pred CCcccchHHHHHHHHHHCC--C-----eEEEEecCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG--H-----QVTLFTRGK 29 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~-----~V~~~~r~~ 29 (197)
+||+|.||++++..|+..+ . ++++++..+
T Consensus 9 IGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~ 44 (323)
T TIGR01759 9 TGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP 44 (323)
T ss_pred ECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence 5888999999999999887 3 899999865
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.048 Score=43.39 Aligned_cols=90 Identities=8% Similarity=0.029 Sum_probs=60.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|+|-+|...++.|.+.|.+|++++|+++..... ..... ..+..+..+.+.+.+.+. ..|+||+++..
T Consensus 174 GaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l---------~~~~g--~~v~~~~~~~~~l~~~l~--~aDvVI~a~~~ 240 (370)
T TIGR00518 174 GGGVVGTNAAKMANGLGATVTILDINIDRLRQL---------DAEFG--GRIHTRYSNAYEIEDAVK--RADLLIGAVLI 240 (370)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH---------HHhcC--ceeEeccCCHHHHHHHHc--cCCEEEEcccc
Confidence 559999999999999999999999976542110 00001 112334567778888887 89999998743
Q ss_pred Cc---c--chHHHHHhCCCCCcEEEEec
Q 029198 83 EA---D--EVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 83 ~~---~--~~~~ll~~~~~~~~~v~~Ss 105 (197)
.. . -++..++.++....++-++.
T Consensus 241 ~g~~~p~lit~~~l~~mk~g~vIvDva~ 268 (370)
T TIGR00518 241 PGAKAPKLVSNSLVAQMKPGAVIVDVAI 268 (370)
T ss_pred CCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence 21 1 24667777773356777774
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.12 Score=41.49 Aligned_cols=104 Identities=13% Similarity=0.043 Sum_probs=65.5
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCC----CC-----C-----chhhhhccCceEEE--eecCCCHHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP----GE-----S-----DQEFAEFSSKILHL--KGDRKDYDFVK 65 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~----~~-----~-----~~~~~~~~~~~~~~--~~d~~~~~~l~ 65 (197)
|+|.+|+.++..|+..|. ++++++...-+..+..+ .. . ...+.+.++.+.+. ...+. .+...
T Consensus 49 G~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~-~~~~~ 127 (392)
T PRK07878 49 GAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFRLD-PSNAV 127 (392)
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEeccCC-hhHHH
Confidence 679999999999999995 78888876433221111 00 0 12344556665553 34444 44566
Q ss_pred hhhhccCccEEEeccCCCccchHH-HHHhCC-CCCcEEEEecceeccc
Q 029198 66 SSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYLK 111 (197)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~-ll~~~~-~~~~~v~~Ss~~vyg~ 111 (197)
++++ ++|+|+.+... ..++. +-+++. ..+.+|+.+..+.+|.
T Consensus 128 ~~~~--~~D~Vvd~~d~--~~~r~~ln~~~~~~~~p~v~~~~~g~~G~ 171 (392)
T PRK07878 128 ELFS--QYDLILDGTDN--FATRYLVNDAAVLAGKPYVWGSIYRFEGQ 171 (392)
T ss_pred HHHh--cCCEEEECCCC--HHHHHHHHHHHHHcCCCEEEEEeccCEEE
Confidence 7777 89999987643 23444 345555 4567888887777664
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.041 Score=36.29 Aligned_cols=95 Identities=18% Similarity=0.108 Sum_probs=49.8
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
+|++|.+|..++..|.+. ++++.++..++....+.. ....+.+.-+..+..+.+.+. .. ++|+||-+
T Consensus 5 iG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~--~~--~~DvV~~~ 72 (122)
T smart00859 5 VGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRV--------SEAGPHLKGEVVLELEPEDFE--EL--AVDIVFLA 72 (122)
T ss_pred ECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCH--------HHHCcccccccccccccCChh--hc--CCCEEEEc
Confidence 488999999999999995 788888833322111111 111122211111111222222 12 88999877
Q ss_pred cCCCccchH---HHHHhCCCCCcEEEEeccee
Q 029198 80 NGREADEVE---PILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 80 a~~~~~~~~---~ll~~~~~~~~~v~~Ss~~v 108 (197)
.... ...+ .+...++.-+.+|.+||..-
T Consensus 73 ~~~~-~~~~~~~~~~~~~~~g~~viD~s~~~~ 103 (122)
T smart00859 73 LPHG-VSKEIAPLLPKAAEAGVKVIDLSSAFR 103 (122)
T ss_pred CCcH-HHHHHHHHHHhhhcCCCEEEECCcccc
Confidence 6543 2222 23333344467887887543
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.019 Score=46.80 Aligned_cols=69 Identities=23% Similarity=0.282 Sum_probs=44.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+|+++ +|..+++.|++.|++|++.+++........ ..++. ..++.++.+|..+ .... ++|+||+++
T Consensus 11 iG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~----~~~l~--~~~~~~~~~~~~~-----~~~~--~~d~vv~~~ 76 (450)
T PRK14106 11 VGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEA----LEELG--ELGIELVLGEYPE-----EFLE--GVDLVVVSP 76 (450)
T ss_pred ECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHH--hcCCEEEeCCcch-----hHhh--cCCEEEECC
Confidence 46666 999999999999999999999753211000 00111 1246677776665 2233 789999888
Q ss_pred CCC
Q 029198 81 GRE 83 (197)
Q Consensus 81 ~~~ 83 (197)
+..
T Consensus 77 g~~ 79 (450)
T PRK14106 77 GVP 79 (450)
T ss_pred CCC
Confidence 753
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.068 Score=41.30 Aligned_cols=90 Identities=22% Similarity=0.269 Sum_probs=55.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~~ 79 (197)
+||+|.+|..+++.+...|.+|++++++++... .+. .. ..-.++ +..+ .+.+.+. .++|.++++
T Consensus 169 ~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~-~~~--------~~-~~~~~~--~~~~~~~~~~~~---~~~d~v~~~ 233 (332)
T cd08259 169 TGAGGGVGIHAIQLAKALGARVIAVTRSPEKLK-ILK--------EL-GADYVI--DGSKFSEDVKKL---GGADVVIEL 233 (332)
T ss_pred ECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHH--------Hc-CCcEEE--ecHHHHHHHHhc---cCCCEEEEC
Confidence 489999999999999999999999998765421 110 00 111111 2221 1222221 279999999
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEecce
Q 029198 80 NGREADEVEPILDALPNLEQFIYCSSAG 107 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~Ss~~ 107 (197)
++.. .....++.+....+++.+++..
T Consensus 234 ~g~~--~~~~~~~~~~~~g~~v~~g~~~ 259 (332)
T cd08259 234 VGSP--TIEESLRSLNKGGRLVLIGNVT 259 (332)
T ss_pred CChH--HHHHHHHHhhcCCEEEEEcCCC
Confidence 8753 3566677776445788776543
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.049 Score=48.73 Aligned_cols=69 Identities=16% Similarity=0.003 Sum_probs=50.6
Q ss_pred cccchHHHHHHHHHHCC-Ce-------------EEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhh
Q 029198 3 GTRFIGVFLSRLLVKEG-HQ-------------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL 68 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 68 (197)
|+|++|+..++.|.+.. ++ |++.+++.+... .+.+..+++..+..|+.|.+++.+++
T Consensus 576 GAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~---------~la~~~~~~~~v~lDv~D~e~L~~~v 646 (1042)
T PLN02819 576 GAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAK---------ETVEGIENAEAVQLDVSDSESLLKYV 646 (1042)
T ss_pred CCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHH---------HHHHhcCCCceEEeecCCHHHHHHhh
Confidence 46999999999998763 33 666666654421 11122246778999999999999998
Q ss_pred hccCccEEEeccCC
Q 029198 69 SAKGFDVVYDINGR 82 (197)
Q Consensus 69 ~~~~~d~vi~~a~~ 82 (197)
+ ++|+||++...
T Consensus 647 ~--~~DaVIsalP~ 658 (1042)
T PLN02819 647 S--QVDVVISLLPA 658 (1042)
T ss_pred c--CCCEEEECCCc
Confidence 8 79999988754
|
|
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.065 Score=42.65 Aligned_cols=65 Identities=15% Similarity=0.043 Sum_probs=49.8
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|+|..|..++..+.+.|++|++++.++......+ . -..+..|..|++.+.++.++.++|.|+...
T Consensus 6 G~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~------------a-d~~~~~~~~d~~~l~~~~~~~~id~v~~~~ 70 (380)
T TIGR01142 6 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQV------------A-HRSYVINMLDGDALRAVIEREKPDYIVPEI 70 (380)
T ss_pred CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhh------------C-ceEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence 4699999999999999999999999865422111 1 134556888999999988877899998543
|
This enzyme is an alternative to PurN (TIGR00639) |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.0072 Score=42.87 Aligned_cols=85 Identities=16% Similarity=0.146 Sum_probs=52.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.||+.+++.|..-|.+|++.+|+....... . ...+ ...++.+++. .+|+|+.+.-.
T Consensus 43 G~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~---------~--~~~~--------~~~~l~ell~--~aDiv~~~~pl 101 (178)
T PF02826_consen 43 GYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA---------D--EFGV--------EYVSLDELLA--QADIVSLHLPL 101 (178)
T ss_dssp STSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH---------H--HTTE--------EESSHHHHHH--H-SEEEE-SSS
T ss_pred EEcCCcCeEeeeeecCCceeEEecccCChhhhc---------c--cccc--------eeeehhhhcc--hhhhhhhhhcc
Confidence 679999999999999999999999987652100 0 0011 1123556666 78888876654
Q ss_pred Cccc----hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EADE----VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~~~----~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+... .+..++.|+.-..||+++-..+
T Consensus 102 t~~T~~li~~~~l~~mk~ga~lvN~aRG~~ 131 (178)
T PF02826_consen 102 TPETRGLINAEFLAKMKPGAVLVNVARGEL 131 (178)
T ss_dssp STTTTTSBSHHHHHTSTTTEEEEESSSGGG
T ss_pred ccccceeeeeeeeeccccceEEEeccchhh
Confidence 3221 3456777774456777765444
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.067 Score=42.24 Aligned_cols=31 Identities=23% Similarity=0.401 Sum_probs=25.4
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~ 31 (197)
+||||++|+.+++.|.+... +++++.++++.
T Consensus 9 ~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~ 40 (349)
T PRK08664 9 LGATGMVGQRFVQLLANHPWFEVTALAASERS 40 (349)
T ss_pred ECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence 59999999999999997754 89988666543
|
|
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.04 Score=36.53 Aligned_cols=87 Identities=20% Similarity=0.262 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC---HHHHHhhhhccCccEEEeccCCC
Q 029198 7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYDINGRE 83 (197)
Q Consensus 7 vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~l~~~~~~~~~d~vi~~a~~~ 83 (197)
||...+..+...|.+|+++++++.+.. . +.+ .. ...+ .|..+ .+.+.++....++|+||.|.+.
T Consensus 2 vG~~a~q~ak~~G~~vi~~~~~~~k~~-~--------~~~-~G-a~~~-~~~~~~~~~~~i~~~~~~~~~d~vid~~g~- 68 (130)
T PF00107_consen 2 VGLMAIQLAKAMGAKVIATDRSEEKLE-L--------AKE-LG-ADHV-IDYSDDDFVEQIRELTGGRGVDVVIDCVGS- 68 (130)
T ss_dssp HHHHHHHHHHHTTSEEEEEESSHHHHH-H--------HHH-TT-ESEE-EETTTSSHHHHHHHHTTTSSEEEEEESSSS-
T ss_pred hHHHHHHHHHHcCCEEEEEECCHHHHH-H--------HHh-hc-cccc-ccccccccccccccccccccceEEEEecCc-
Confidence 688888888888999999999876621 1 111 12 2222 23333 4556666654579999999984
Q ss_pred ccchHHHHHhCCCCCcEEEEecc
Q 029198 84 ADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 84 ~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
.......++.++...+++.++..
T Consensus 69 ~~~~~~~~~~l~~~G~~v~vg~~ 91 (130)
T PF00107_consen 69 GDTLQEAIKLLRPGGRIVVVGVY 91 (130)
T ss_dssp HHHHHHHHHHEEEEEEEEEESST
T ss_pred HHHHHHHHHHhccCCEEEEEEcc
Confidence 35566777777744677777643
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.13 Score=40.15 Aligned_cols=92 Identities=13% Similarity=0.162 Sum_probs=57.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeec-CCC-HHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGD-RKD-YDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d-~~~-~~~l~~~~~~~~~d~vi 77 (197)
+||+|.+|..++..+...|.+|+++++++++.... .+ ... -.++..+ -.+ .+.+.+... .++|+|+
T Consensus 158 ~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~---------~~~lGa-~~vi~~~~~~~~~~~i~~~~~-~gvd~v~ 226 (338)
T cd08295 158 SAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL---------KNKLGF-DDAFNYKEEPDLDAALKRYFP-NGIDIYF 226 (338)
T ss_pred ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HHhcCC-ceeEEcCCcccHHHHHHHhCC-CCcEEEE
Confidence 48899999999998888999999998876552211 11 111 1122211 112 223333332 4799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
++.+. ......++.++...+++.++.
T Consensus 227 d~~g~--~~~~~~~~~l~~~G~iv~~G~ 252 (338)
T cd08295 227 DNVGG--KMLDAVLLNMNLHGRIAACGM 252 (338)
T ss_pred ECCCH--HHHHHHHHHhccCcEEEEecc
Confidence 99874 456677788875567887764
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.15 Score=39.56 Aligned_cols=92 Identities=20% Similarity=0.242 Sum_probs=56.8
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEecc
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~~a 80 (197)
||+|.+|...+..+...|.+|+++++++++... + .+. ..-.++..+-.+ .+.+.+.....++|++|++.
T Consensus 151 ~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~-~--------~~~-g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~ 220 (324)
T cd08291 151 AAASALGRMLVRLCKADGIKVINIVRRKEQVDL-L--------KKI-GAEYVLNSSDPDFLEDLKELIAKLNATIFFDAV 220 (324)
T ss_pred cCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H--------HHc-CCcEEEECCCccHHHHHHHHhCCCCCcEEEECC
Confidence 799999999998888889999999887654211 1 111 111222221112 23444444445799999988
Q ss_pred CCCccchHHHHHhCCCCCcEEEEec
Q 029198 81 GREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+. ......++.++...+++.++.
T Consensus 221 g~--~~~~~~~~~l~~~G~~v~~g~ 243 (324)
T cd08291 221 GG--GLTGQILLAMPYGSTLYVYGY 243 (324)
T ss_pred Cc--HHHHHHHHhhCCCCEEEEEEe
Confidence 74 344556777774457777764
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.15 Score=40.66 Aligned_cols=103 Identities=15% Similarity=0.119 Sum_probs=63.8
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCC--------------CchhhhhccCceEEEe--ecCCCHHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILHLK--GDRKDYDFVK 65 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~--~d~~~~~~l~ 65 (197)
|+|.+|..++..|+..|. ++++++...-+..+..+.. ...++.+.++.+.+.. ..+ +.+.+.
T Consensus 48 G~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-~~~~~~ 126 (370)
T PRK05600 48 GAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRERL-TAENAV 126 (370)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeeec-CHHHHH
Confidence 679999999999999994 8999998743322211100 0223445566554444 344 355667
Q ss_pred hhhhccCccEEEeccCCCccchHHHH-HhCC-CCCcEEEEecceecc
Q 029198 66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll-~~~~-~~~~~v~~Ss~~vyg 110 (197)
++++ ++|+||.|.-- ..++.++ +++. ....+|+.+..+.+|
T Consensus 127 ~~~~--~~DlVid~~Dn--~~~r~~in~~~~~~~iP~v~~~~~g~~G 169 (370)
T PRK05600 127 ELLN--GVDLVLDGSDS--FATKFLVADAAEITGTPLVWGTVLRFHG 169 (370)
T ss_pred HHHh--CCCEEEECCCC--HHHHHHHHHHHHHcCCCEEEEEEecCEE
Confidence 7787 89999988753 2344444 4445 445677777655544
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.027 Score=45.47 Aligned_cols=31 Identities=29% Similarity=0.482 Sum_probs=27.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCcc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA 33 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~ 33 (197)
|+|++|..++..|++.||+|+++++++++..
T Consensus 7 GlG~~G~~lA~~La~~G~~V~~~d~~~~~v~ 37 (411)
T TIGR03026 7 GLGYVGLPLAALLADLGHEVTGVDIDQEKVD 37 (411)
T ss_pred CCCchhHHHHHHHHhcCCeEEEEECCHHHHH
Confidence 6799999999999999999999999877643
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.047 Score=42.25 Aligned_cols=67 Identities=18% Similarity=0.249 Sum_probs=42.8
Q ss_pred cccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhc----cCceEEEeecCCCHHHHHhhhhccCccEE
Q 029198 3 GTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEF----SSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~l~~~~~~~~~d~v 76 (197)
|+|.+|+.++..|+..| ++|++++++++....... ++... ........ .+.+. +. ++|+|
T Consensus 7 GaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~-----dL~~~~~~~~~~~~i~~---~~~~~----l~--~aDIV 72 (306)
T cd05291 7 GAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEAL-----DLEDALAFLPSPVKIKA---GDYSD----CK--DADIV 72 (306)
T ss_pred CCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHh-----hHHHHhhccCCCeEEEc---CCHHH----hC--CCCEE
Confidence 46999999999999999 699999998776432211 11111 11222222 23332 34 99999
Q ss_pred EeccCCC
Q 029198 77 YDINGRE 83 (197)
Q Consensus 77 i~~a~~~ 83 (197)
|++++..
T Consensus 73 Iitag~~ 79 (306)
T cd05291 73 VITAGAP 79 (306)
T ss_pred EEccCCC
Confidence 9999874
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.054 Score=36.18 Aligned_cols=25 Identities=32% Similarity=0.496 Sum_probs=22.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEec
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTR 27 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r 27 (197)
|+|.+|.+|++.|.+.||+|.++..
T Consensus 17 GaGrVG~~La~aL~~ag~~v~~v~s 41 (127)
T PF10727_consen 17 GAGRVGTALARALARAGHEVVGVYS 41 (127)
T ss_dssp CTSCCCCHHHHHHHHTTSEEEEESS
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEEe
Confidence 5699999999999999999998854
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.016 Score=42.51 Aligned_cols=31 Identities=29% Similarity=0.343 Sum_probs=28.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
+||+|.+|+.++..|.+.|++|++.+|++++
T Consensus 6 IGG~G~mG~ala~~L~~~G~~V~v~~r~~~~ 36 (219)
T TIGR01915 6 LGGTGDQGKGLALRLAKAGNKIIIGSRDLEK 36 (219)
T ss_pred EcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence 3789999999999999999999999998755
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.093 Score=40.56 Aligned_cols=82 Identities=18% Similarity=0.083 Sum_probs=50.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|..-|.+|++.+|+.... ++... ..++.+++. .+|+|+.+...
T Consensus 129 G~G~IG~~vA~~l~afG~~V~~~~r~~~~~-----------------~~~~~------~~~l~ell~--~aDiv~~~lp~ 183 (303)
T PRK06436 129 GYGGIGRRVALLAKAFGMNIYAYTRSYVND-----------------GISSI------YMEPEDIMK--KSDFVLISLPL 183 (303)
T ss_pred CcCHHHHHHHHHHHHCCCEEEEECCCCccc-----------------Ccccc------cCCHHHHHh--hCCEEEECCCC
Confidence 679999999998888899999999874320 11100 113556666 77888766544
Q ss_pred Cccc----hHHHHHhCCCCCcEEEEecceec
Q 029198 83 EADE----VEPILDALPNLEQFIYCSSAGVY 109 (197)
Q Consensus 83 ~~~~----~~~ll~~~~~~~~~v~~Ss~~vy 109 (197)
+... ....++.|+.-.-+|++|...+.
T Consensus 184 t~~T~~li~~~~l~~mk~ga~lIN~sRG~~v 214 (303)
T PRK06436 184 TDETRGMINSKMLSLFRKGLAIINVARADVV 214 (303)
T ss_pred CchhhcCcCHHHHhcCCCCeEEEECCCcccc
Confidence 3211 13455666633567777765543
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.043 Score=36.48 Aligned_cols=81 Identities=19% Similarity=0.152 Sum_probs=44.9
Q ss_pred CCcccchHHHHHHHHHH-CCCeEEEEecCCC-CccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKA-PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~-~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
.|++|.+|+.+++.+.+ .++++.+...+.. ....... .++.... ...+.-.++++++++ .+|++|.
T Consensus 6 ~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~----g~~~~~~------~~~~~v~~~l~~~~~--~~DVvID 73 (124)
T PF01113_consen 6 VGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDV----GELAGIG------PLGVPVTDDLEELLE--EADVVID 73 (124)
T ss_dssp ETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBC----HHHCTSS------T-SSBEBS-HHHHTT--H-SEEEE
T ss_pred ECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchh----hhhhCcC------CcccccchhHHHhcc--cCCEEEE
Confidence 48889999999999999 5777666554443 2110000 0000000 111111256777887 5999999
Q ss_pred ccCCCccchHHHHHhCC
Q 029198 79 INGREADEVEPILDALP 95 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~ 95 (197)
+. ........++.+.
T Consensus 74 fT--~p~~~~~~~~~~~ 88 (124)
T PF01113_consen 74 FT--NPDAVYDNLEYAL 88 (124)
T ss_dssp ES---HHHHHHHHHHHH
T ss_pred cC--ChHHhHHHHHHHH
Confidence 98 3355555566555
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.045 Score=36.58 Aligned_cols=88 Identities=18% Similarity=0.223 Sum_probs=51.8
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeec-------------------CC
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD-------------------RK 59 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-------------------~~ 59 (197)
+|+||-||+..++-+.+.. ++|++++-..+... + .....+..++.-.+.-+ +.
T Consensus 4 LGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~--L----~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~ 77 (129)
T PF02670_consen 4 LGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEK--L----AEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLS 77 (129)
T ss_dssp ESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHH--H----HHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEE
T ss_pred EcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHH--H----HHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEe
Confidence 5999999999999999887 78998887544311 0 01111222222222110 12
Q ss_pred CHHHHHhhhhccCccEEEeccCCCccchHHHHHhCC
Q 029198 60 DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALP 95 (197)
Q Consensus 60 ~~~~l~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~ 95 (197)
.++.+.++.+..++|+|++... ...+.+..+.+++
T Consensus 78 G~~~l~~~~~~~~~D~vv~Ai~-G~aGL~pt~~Ai~ 112 (129)
T PF02670_consen 78 GPEGLEELAEEPEVDIVVNAIV-GFAGLKPTLAAIK 112 (129)
T ss_dssp SHHHHHHHHTHTT-SEEEE--S-SGGGHHHHHHHHH
T ss_pred ChHHHHHHhcCCCCCEEEEeCc-ccchHHHHHHHHH
Confidence 3555666666668999987753 3467777777777
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.12 Score=39.97 Aligned_cols=94 Identities=19% Similarity=0.210 Sum_probs=60.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHh---hhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS---SLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~---~~~~~~~d~vi 77 (197)
+|+++.+|..++..+...|.+|+.+++++.... .+. .. ... ...|..+.+.... .....++|.++
T Consensus 173 ~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~-~~~--------~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i 240 (342)
T cd08266 173 HGAGSGVGSAAIQIAKLFGATVIATAGSEDKLE-RAK--------EL--GAD-YVIDYRKEDFVREVRELTGKRGVDVVV 240 (342)
T ss_pred ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH--------Hc--CCC-eEEecCChHHHHHHHHHhCCCCCcEEE
Confidence 488899999999999999999999988765421 110 01 111 1134444433333 33334799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEeccee
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
++++. ......++.++...+++.+++...
T Consensus 241 ~~~g~--~~~~~~~~~l~~~G~~v~~~~~~~ 269 (342)
T cd08266 241 EHVGA--ATWEKSLKSLARGGRLVTCGATTG 269 (342)
T ss_pred ECCcH--HHHHHHHHHhhcCCEEEEEecCCC
Confidence 99875 345566777774468888876543
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.035 Score=42.81 Aligned_cols=30 Identities=23% Similarity=0.431 Sum_probs=26.8
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|.|.+|..++..|++.|++|.+.+|++++.
T Consensus 7 GlG~mG~~la~~L~~~g~~V~~~dr~~~~~ 36 (298)
T TIGR00872 7 GLGRMGANIVRRLAKRGHDCVGYDHDQDAV 36 (298)
T ss_pred cchHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 579999999999999999999999987653
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.19 Score=38.73 Aligned_cols=92 Identities=17% Similarity=0.173 Sum_probs=59.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCce-EEEeecC-CCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDR-KDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~-~~~~~l~~~~~~~~~d~vi~ 78 (197)
.||+|.+|..++..+...|.+|+.++++.+..... .+. ++ .++..+- .-.+.+.+.....++|.|++
T Consensus 146 ~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~---------~~~--g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d 214 (324)
T cd08292 146 NAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL---------RAL--GIGPVVSTEQPGWQDKVREAAGGAPISVALD 214 (324)
T ss_pred cccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH---------Hhc--CCCEEEcCCCchHHHHHHHHhCCCCCcEEEE
Confidence 48899999999999999999999998876652211 111 11 1222111 11234445555457999999
Q ss_pred ccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 79 INGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+.+.. .....++.++...+++.++.
T Consensus 215 ~~g~~--~~~~~~~~l~~~g~~v~~g~ 239 (324)
T cd08292 215 SVGGK--LAGELLSLLGEGGTLVSFGS 239 (324)
T ss_pred CCCCh--hHHHHHHhhcCCcEEEEEec
Confidence 98753 45566777775567887764
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.25 Score=39.67 Aligned_cols=105 Identities=15% Similarity=0.034 Sum_probs=65.2
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCC--------------CchhhhhccCceEEEeecC-CCHHHHHh
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILHLKGDR-KDYDFVKS 66 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~d~-~~~~~l~~ 66 (197)
|+|.+|..++..|+..|. ++++++...-...+..+.. ...++.+.++.+.+...+- .+.+...+
T Consensus 45 G~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~~~~~~~~~~ 124 (390)
T PRK07411 45 GTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYETRLSSENALD 124 (390)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEecccCHHhHHH
Confidence 679999999999999995 8888888754432211100 0123445566655544432 23445667
Q ss_pred hhhccCccEEEeccCCCccchHHHH-HhCC-CCCcEEEEecceeccc
Q 029198 67 SLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYLK 111 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll-~~~~-~~~~~v~~Ss~~vyg~ 111 (197)
++. ++|+||.+.... .++.++ +++. ..+.+|+.+..+.+|.
T Consensus 125 ~~~--~~D~Vvd~~d~~--~~r~~ln~~~~~~~~p~v~~~~~g~~g~ 167 (390)
T PRK07411 125 ILA--PYDVVVDGTDNF--PTRYLVNDACVLLNKPNVYGSIFRFEGQ 167 (390)
T ss_pred HHh--CCCEEEECCCCH--HHHHHHHHHHHHcCCCEEEEEEccCEEE
Confidence 777 899999887532 344444 4445 4567777776666653
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.15 Score=39.44 Aligned_cols=91 Identities=15% Similarity=0.120 Sum_probs=58.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC--HHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~l~~~~~~~~~d~vi~ 78 (197)
.|++|.+|..++..+...|.+|+.+++++++.... .+. ++..+ .|..+ .+.+... ...++|.|++
T Consensus 153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~---------~~~--g~~~v-~~~~~~~~~~~~~~-~~~~~d~vld 219 (326)
T cd08289 153 TGATGGVGSLAVSILAKLGYEVVASTGKADAADYL---------KKL--GAKEV-IPREELQEESIKPL-EKQRWAGAVD 219 (326)
T ss_pred EcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH---------HHc--CCCEE-EcchhHHHHHHHhh-ccCCcCEEEE
Confidence 47889999999999999999999999887652211 111 11111 11222 2333333 3347999999
Q ss_pred ccCCCccchHHHHHhCCCCCcEEEEecc
Q 029198 79 INGREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
+.+. ......+..++...+++.++..
T Consensus 220 ~~g~--~~~~~~~~~l~~~G~~i~~g~~ 245 (326)
T cd08289 220 PVGG--KTLAYLLSTLQYGGSVAVSGLT 245 (326)
T ss_pred CCcH--HHHHHHHHHhhcCCEEEEEeec
Confidence 9874 3566777777755688877753
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.028 Score=44.47 Aligned_cols=32 Identities=22% Similarity=0.433 Sum_probs=29.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ 34 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~ 34 (197)
|+||||.....-|++.||+|++++..+.+...
T Consensus 7 GtGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ 38 (414)
T COG1004 7 GTGYVGLVTGACLAELGHEVVCVDIDESKVEL 38 (414)
T ss_pred CCchHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence 78999999999999999999999999887643
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.19 Score=38.47 Aligned_cols=92 Identities=15% Similarity=0.147 Sum_probs=57.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
+|++|.+|..++..+...|.+|+.++++++.... + ... ++.. ..|..+. +.+.+.....++|.++
T Consensus 151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~-~--------~~~--g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi 218 (325)
T cd08253 151 HGGSGAVGHAAVQLARWAGARVIATASSAEGAEL-V--------RQA--GADA-VFNYRAEDLADRILAATAGQGVDVII 218 (325)
T ss_pred EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H--------HHc--CCCE-EEeCCCcCHHHHHHHHcCCCceEEEE
Confidence 4789999999999999999999999887654211 1 111 1111 1233333 3334444445799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEecc
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
++++.. .....++.++...+++.+++.
T Consensus 219 ~~~~~~--~~~~~~~~l~~~g~~v~~~~~ 245 (325)
T cd08253 219 EVLANV--NLAKDLDVLAPGGRIVVYGSG 245 (325)
T ss_pred ECCchH--HHHHHHHhhCCCCEEEEEeec
Confidence 988652 344455555544678887764
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.27 Score=38.12 Aligned_cols=104 Identities=17% Similarity=0.221 Sum_probs=65.4
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCC---------------chhhhhccCc--eEEEeecCCCHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGES---------------DQEFAEFSSK--ILHLKGDRKDYDFV 64 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~~--~~~~~~d~~~~~~l 64 (197)
|+|.+|.++++.|+..|. ++++++...-+.... .+.. ...+.+.++. ++.+..++.+....
T Consensus 6 GaGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNL-nRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~~~~~ 84 (312)
T cd01489 6 GAGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNL-NRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKDPDFN 84 (312)
T ss_pred CCCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhc-CcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCCccch
Confidence 569999999999999994 888888875443221 1111 1122344554 44455567664444
Q ss_pred HhhhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecceecc
Q 029198 65 KSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 65 ~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
.+.++ ++|+|+.+.- +...-..+-+.++ ....+|..++.+.+|
T Consensus 85 ~~f~~--~~DvVv~a~D-n~~ar~~in~~c~~~~ip~I~~gt~G~~G 128 (312)
T cd01489 85 VEFFK--QFDLVFNALD-NLAARRHVNKMCLAADVPLIESGTTGFLG 128 (312)
T ss_pred HHHHh--cCCEEEECCC-CHHHHHHHHHHHHHCCCCEEEEecCccee
Confidence 56677 8999998764 3333333445556 556788887777666
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.12 Score=41.19 Aligned_cols=60 Identities=18% Similarity=0.166 Sum_probs=46.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
|+|.+|..++..+.+.|++|++++.++......+ .-..+.+|+.|.+.+.++.+ .+|+|.
T Consensus 9 G~Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~-------------ad~~~~~~~~D~~~l~~~a~--~~dvit 68 (372)
T PRK06019 9 GGGQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV-------------ADEVIVADYDDVAALRELAE--QCDVIT 68 (372)
T ss_pred CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh-------------CceEEecCCCCHHHHHHHHh--cCCEEE
Confidence 4589999999999999999999998765522111 12355578899999999988 888875
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.23 Score=34.60 Aligned_cols=67 Identities=19% Similarity=0.273 Sum_probs=45.8
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCC--C-----HHHHHhhhhccCcc
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--D-----YDFVKSSLSAKGFD 74 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~-----~~~l~~~~~~~~~d 74 (197)
||-|-+|+++++.+.+++|-|.-++..+.+.. +.-.++..|-+ + .+++-..+....+|
T Consensus 10 GGkGALGSacv~~FkannywV~siDl~eNe~A---------------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvD 74 (236)
T KOG4022|consen 10 GGKGALGSACVEFFKANNYWVLSIDLSENEQA---------------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVD 74 (236)
T ss_pred cCcchHhHHHHHHHHhcCeEEEEEeecccccc---------------cceEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence 88999999999999999999999888766521 11223333222 1 12333445567899
Q ss_pred EEEeccCCC
Q 029198 75 VVYDINGRE 83 (197)
Q Consensus 75 ~vi~~a~~~ 83 (197)
.||+.||-.
T Consensus 75 av~CVAGGW 83 (236)
T KOG4022|consen 75 AVFCVAGGW 83 (236)
T ss_pred eEEEeeccc
Confidence 999988753
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.037 Score=41.84 Aligned_cols=74 Identities=14% Similarity=0.090 Sum_probs=45.2
Q ss_pred CCcccchHHHHHHHHHHCC----CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~v 76 (197)
+||+|.+|..++..|+..| .+|++++.+++...... .++....... ....+.-.+++.++++ ++|+|
T Consensus 4 IGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~-----~dl~~~~~~~--~~~~i~~~~d~~~~~~--~aDiV 74 (263)
T cd00650 4 IGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVA-----MDLQDAVEPL--ADIKVSITDDPYEAFK--DADVV 74 (263)
T ss_pred ECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHH-----HHHHHhhhhc--cCcEEEECCchHHHhC--CCCEE
Confidence 4888999999999999998 79999999875532211 1111111110 0111111222345566 99999
Q ss_pred EeccCCC
Q 029198 77 YDINGRE 83 (197)
Q Consensus 77 i~~a~~~ 83 (197)
|.+++..
T Consensus 75 v~t~~~~ 81 (263)
T cd00650 75 IITAGVG 81 (263)
T ss_pred EECCCCC
Confidence 9988763
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.056 Score=42.34 Aligned_cols=29 Identities=21% Similarity=0.316 Sum_probs=23.2
Q ss_pred CCcccchHHHHHHHHHHCC---CeEEEEecCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGK 29 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g---~~V~~~~r~~ 29 (197)
+||||++|..+++.|.++. .++..++...
T Consensus 10 vGATG~vG~ellrlL~~~~hP~~~l~~laS~~ 41 (336)
T PRK08040 10 LGATGAVGEALLELLAERQFPVGELYALASEE 41 (336)
T ss_pred EccCCHHHHHHHHHHhcCCCCceEEEEEEccC
Confidence 5999999999999999864 3777775553
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.29 Score=38.61 Aligned_cols=71 Identities=24% Similarity=0.253 Sum_probs=45.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhh--ccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS--AKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~--~~~~d~vi~ 78 (197)
.||+|.+|++.++-+...|...++.+++.++.+ +...... -...|+.+++..+...+ ..++|+|++
T Consensus 164 ~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~----------l~k~lGA--d~vvdy~~~~~~e~~kk~~~~~~DvVlD 231 (347)
T KOG1198|consen 164 LGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE----------LVKKLGA--DEVVDYKDENVVELIKKYTGKGVDVVLD 231 (347)
T ss_pred EeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH----------HHHHcCC--cEeecCCCHHHHHHHHhhcCCCccEEEE
Confidence 489999999999999999944444455444421 1111111 22357777665555554 347999999
Q ss_pred ccCCC
Q 029198 79 INGRE 83 (197)
Q Consensus 79 ~a~~~ 83 (197)
|.+..
T Consensus 232 ~vg~~ 236 (347)
T KOG1198|consen 232 CVGGS 236 (347)
T ss_pred CCCCC
Confidence 99874
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.015 Score=45.18 Aligned_cols=29 Identities=17% Similarity=0.219 Sum_probs=26.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|-+|..++..|+..|++|++.+++++.
T Consensus 14 GaG~MG~giA~~~a~aG~~V~l~D~~~~~ 42 (321)
T PRK07066 14 GSGVIGSGWVARALAHGLDVVAWDPAPGA 42 (321)
T ss_pred CcCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence 56999999999999999999999998764
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.24 Score=38.11 Aligned_cols=92 Identities=23% Similarity=0.165 Sum_probs=59.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
+|++|.+|..++..+...|.+|+.++++++... .+ .+. ++.. ..+..+. +.+.......++|.++
T Consensus 149 ~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~-~~--------~~~--g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vl 216 (324)
T cd08244 149 TAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA-LV--------RAL--GADV-AVDYTRPDWPDQVREALGGGGVTVVL 216 (324)
T ss_pred EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH--------HHc--CCCE-EEecCCccHHHHHHHHcCCCCceEEE
Confidence 488999999999999999999999988765521 11 111 1111 1222332 3344444445799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEecc
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
++.+.. .....++.++...+++.++..
T Consensus 217 ~~~g~~--~~~~~~~~l~~~g~~v~~g~~ 243 (324)
T cd08244 217 DGVGGA--IGRAALALLAPGGRFLTYGWA 243 (324)
T ss_pred ECCChH--hHHHHHHHhccCcEEEEEecC
Confidence 998753 356677777755688877653
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.07 Score=42.54 Aligned_cols=29 Identities=24% Similarity=0.558 Sum_probs=26.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCC
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK 29 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~ 29 (197)
+||+|.+|..++..|.+.|++|++.+|++
T Consensus 104 iGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 104 VGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred EcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 47899999999999999999999999864
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.28 Score=38.29 Aligned_cols=94 Identities=14% Similarity=0.200 Sum_probs=57.8
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~ 78 (197)
+||+|.+|...+..+...|. +|+++++++++...... +.... .++..+-.+ .+.+.++.. .++|+|++
T Consensus 161 ~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~--------~lGa~-~vi~~~~~~~~~~i~~~~~-~gvd~vid 230 (345)
T cd08293 161 SGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKS--------ELGFD-AAINYKTDNVAERLRELCP-EGVDVYFD 230 (345)
T ss_pred ECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH--------hcCCc-EEEECCCCCHHHHHHHHCC-CCceEEEE
Confidence 48899999999998888898 89999887654211000 01111 122111112 233444433 47999999
Q ss_pred ccCCCccchHHHHHhCCCCCcEEEEecc
Q 029198 79 INGREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
+.+.. .....++.++...+++.++..
T Consensus 231 ~~g~~--~~~~~~~~l~~~G~iv~~G~~ 256 (345)
T cd08293 231 NVGGE--ISDTVISQMNENSHIILCGQI 256 (345)
T ss_pred CCCcH--HHHHHHHHhccCCEEEEEeee
Confidence 88753 356777777755678877643
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.28 Score=37.93 Aligned_cols=95 Identities=19% Similarity=0.187 Sum_probs=58.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~~ 79 (197)
.|++|.+|..++..+...|.+|+.++++++... .+ .+... -.++..+-.+ .+.+..... .++|.|+++
T Consensus 146 ~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~-~~--------~~~g~-~~v~~~~~~~~~~~~~~~~~-~~vd~v~~~ 214 (329)
T cd08250 146 TAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE-FL--------KSLGC-DRPINYKTEDLGEVLKKEYP-KGVDVVYES 214 (329)
T ss_pred EeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH-HH--------HHcCC-ceEEeCCCccHHHHHHHhcC-CCCeEEEEC
Confidence 488999999999999999999999988765421 11 11111 1122221111 123333322 479999998
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEeccee
Q 029198 80 NGREADEVEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
.+. ......++.++...+++.+++...
T Consensus 215 ~g~--~~~~~~~~~l~~~g~~v~~g~~~~ 241 (329)
T cd08250 215 VGG--EMFDTCVDNLALKGRLIVIGFISG 241 (329)
T ss_pred CcH--HHHHHHHHHhccCCeEEEEecccC
Confidence 873 456667777775568888876543
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.084 Score=41.40 Aligned_cols=84 Identities=19% Similarity=0.143 Sum_probs=52.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|.+|.+.+|+...... . . .++. ..++.++++ ..|+|+.+.-.
T Consensus 157 G~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~--------~--~~~~--------~~~l~ell~--~aDiV~l~lP~ 214 (333)
T PRK13243 157 GFGRIGQAVARRAKGFGMRILYYSRTRKPEAE--K--------E--LGAE--------YRPLEELLR--ESDFVSLHVPL 214 (333)
T ss_pred CcCHHHHHHHHHHHHCCCEEEEECCCCChhhH--H--------H--cCCE--------ecCHHHHHh--hCCEEEEeCCC
Confidence 67999999999999999999999987543110 0 0 0111 123555666 77888866543
Q ss_pred CccchH-----HHHHhCCCCCcEEEEecceec
Q 029198 83 EADEVE-----PILDALPNLEQFIYCSSAGVY 109 (197)
Q Consensus 83 ~~~~~~-----~ll~~~~~~~~~v~~Ss~~vy 109 (197)
+ ..++ ..++.|+.-.-+|++|...+.
T Consensus 215 t-~~T~~~i~~~~~~~mk~ga~lIN~aRg~~v 245 (333)
T PRK13243 215 T-KETYHMINEERLKLMKPTAILVNTARGKVV 245 (333)
T ss_pred C-hHHhhccCHHHHhcCCCCeEEEECcCchhc
Confidence 3 2232 345555544567777765553
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.026 Score=43.28 Aligned_cols=30 Identities=30% Similarity=0.315 Sum_probs=27.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|.|.+|..++..|++.|++|++.+|++++.
T Consensus 6 G~G~mG~~iA~~l~~~G~~V~~~dr~~~~~ 35 (291)
T TIGR01505 6 GLGIMGSPMSINLAKAGYQLHVTTIGPEVA 35 (291)
T ss_pred EecHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence 579999999999999999999999987553
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.055 Score=45.90 Aligned_cols=80 Identities=13% Similarity=0.219 Sum_probs=58.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|.++|+++++++++++..+.. + ..+...+.+|.++++.++++-- .++|.++-+...
T Consensus 407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~----------~~g~~v~~GDat~~~~L~~agi-~~A~~vv~~~~d 474 (601)
T PRK03659 407 GFGRFGQVIGRLLMANKMRITVLERDISAVNLM-R----------KYGYKVYYGDATQLELLRAAGA-EKAEAIVITCNE 474 (601)
T ss_pred cCchHHHHHHHHHHhCCCCEEEEECCHHHHHHH-H----------hCCCeEEEeeCCCHHHHHhcCC-ccCCEEEEEeCC
Confidence 579999999999999999999999987763321 1 1467899999999999988743 278888866643
Q ss_pred CccchHHHHHhCC
Q 029198 83 EADEVEPILDALP 95 (197)
Q Consensus 83 ~~~~~~~ll~~~~ 95 (197)
......+...++
T Consensus 475 -~~~n~~i~~~~r 486 (601)
T PRK03659 475 -PEDTMKIVELCQ 486 (601)
T ss_pred -HHHHHHHHHHHH
Confidence 233334445555
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.47 Score=35.59 Aligned_cols=64 Identities=19% Similarity=0.121 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCCC
Q 029198 7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE 83 (197)
Q Consensus 7 vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~~ 83 (197)
=|..+++.|.+.|+.|++..-.+.... . ........+-+.+.+++.+.+.+.+++.||++..+.
T Consensus 13 egr~la~~L~~~g~~v~~Svat~~g~~---~----------~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPf 76 (248)
T PRK08057 13 EARALARALAAAGVDIVLSLAGRTGGP---A----------DLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPY 76 (248)
T ss_pred HHHHHHHHHHhCCCeEEEEEccCCCCc---c----------cCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCcc
Confidence 478999999999998888887764421 1 235677888888999999999989999999886653
|
|
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.26 Score=37.82 Aligned_cols=93 Identities=20% Similarity=0.222 Sum_probs=57.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~~ 79 (197)
+|++|.+|..++..+...|.+|+.+++++.+.. .+. +. .--.++..+..+ .+.+.......++|.++++
T Consensus 151 ~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~-~~~--------~~-g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 220 (328)
T cd08268 151 TAASSSVGLAAIQIANAAGATVIATTRTSEKRD-ALL--------AL-GAAHVIVTDEEDLVAEVLRITGGKGVDVVFDP 220 (328)
T ss_pred ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHH--------Hc-CCCEEEecCCccHHHHHHHHhCCCCceEEEEC
Confidence 488999999999999999999999988765421 111 00 111122222112 2233344443479999998
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEec
Q 029198 80 NGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.+. ......++.++...+++.++.
T Consensus 221 ~~~--~~~~~~~~~l~~~g~~v~~g~ 244 (328)
T cd08268 221 VGG--PQFAKLADALAPGGTLVVYGA 244 (328)
T ss_pred Cch--HhHHHHHHhhccCCEEEEEEe
Confidence 875 455666777775557777764
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.21 Score=44.38 Aligned_cols=106 Identities=10% Similarity=-0.042 Sum_probs=67.5
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCC----C-----C-----CchhhhhccCceEEEeec-CCCHHHHHh
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP----G-----E-----SDQEFAEFSSKILHLKGD-RKDYDFVKS 66 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~----~-----~-----~~~~~~~~~~~~~~~~~d-~~~~~~l~~ 66 (197)
|.|.+|+.++..|+..|. ++++++...-+..+..+ . . ....+.+.++.+++...+ -.+.+.+.+
T Consensus 339 GlGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~~~I~~en~~~ 418 (989)
T PRK14852 339 GLGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFPEGVAAETIDA 418 (989)
T ss_pred CCcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEecCCCHHHHHH
Confidence 679999999999999995 78888876443322111 0 0 122445667766665542 235667888
Q ss_pred hhhccCccEEEeccCCCccch-HHHHHhCC-CCCcEEEEecceecc
Q 029198 67 SLSAKGFDVVYDINGREADEV-EPILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~-~~ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
+++ ++|+||.+.-...... +.+.+.|. ....+|..++.+.+|
T Consensus 419 fl~--~~DiVVDa~D~~~~~~rr~l~~~c~~~~IP~I~ag~~G~~g 462 (989)
T PRK14852 419 FLK--DVDLLVDGIDFFALDIRRRLFNRALELGIPVITAGPLGYSC 462 (989)
T ss_pred Hhh--CCCEEEECCCCccHHHHHHHHHHHHHcCCCEEEeeccccCe
Confidence 888 9999998774322222 45666666 556777777655544
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.17 Score=41.46 Aligned_cols=65 Identities=12% Similarity=0.041 Sum_probs=45.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-cCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-~~~d~vi~~a~ 81 (197)
.||..|.+|++++..+|.+|+.+.-.... . . ..++..+.. ...+++.+++++ ...|++|++|+
T Consensus 280 SSGkmG~alA~aa~~~GA~VtlI~Gp~~~-~--~-----------p~~v~~i~V--~ta~eM~~av~~~~~~Di~I~aAA 343 (475)
T PRK13982 280 SSGKQGFAIAAAAAAAGAEVTLISGPVDL-A--D-----------PQGVKVIHV--ESARQMLAAVEAALPADIAIFAAA 343 (475)
T ss_pred CchHHHHHHHHHHHHCCCcEEEEeCCcCC-C--C-----------CCCceEEEe--cCHHHHHHHHHhhCCCCEEEEecc
Confidence 58999999999999999999999853221 0 0 134555543 455555555542 35799999998
Q ss_pred CC
Q 029198 82 RE 83 (197)
Q Consensus 82 ~~ 83 (197)
..
T Consensus 344 Va 345 (475)
T PRK13982 344 VA 345 (475)
T ss_pred cc
Confidence 75
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.1 Score=39.87 Aligned_cols=27 Identities=19% Similarity=0.391 Sum_probs=23.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTR 27 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r 27 (197)
+|++|.+|..++..|++.|..|+...|
T Consensus 165 iG~gg~vGkpia~~L~~~gatVtv~~~ 191 (283)
T PRK14192 165 VGRSAILGKPMAMMLLNANATVTICHS 191 (283)
T ss_pred ECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 478888999999999999998888877
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.25 Score=37.71 Aligned_cols=92 Identities=17% Similarity=0.201 Sum_probs=56.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
+|++|.+|..++..+...|.+|+.++++++... .+ .+. +.. ...+..+. +.+.+.....++|.++
T Consensus 146 ~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~-~~--------~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (323)
T cd05276 146 HGGASGVGTAAIQLAKALGARVIATAGSEEKLE-AC--------RAL--GAD-VAINYRTEDFAEEVKEATGGRGVDVIL 213 (323)
T ss_pred EcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHH-HH--------HHc--CCC-EEEeCCchhHHHHHHHHhCCCCeEEEE
Confidence 488999999999999999999999988754321 11 001 111 11223332 2333343334799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEecc
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
++++.. .....++.+....+++.++..
T Consensus 214 ~~~g~~--~~~~~~~~~~~~g~~i~~~~~ 240 (323)
T cd05276 214 DMVGGD--YLARNLRALAPDGRLVLIGLL 240 (323)
T ss_pred ECCchH--HHHHHHHhhccCCEEEEEecC
Confidence 998742 345556666644577777643
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.29 Score=37.69 Aligned_cols=89 Identities=19% Similarity=0.202 Sum_probs=55.9
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccC----CCCCCC------------chhhhhccCceEEEeec--C-----
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQ----QLPGES------------DQEFAEFSSKILHLKGD--R----- 58 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~----~~~~~~------------~~~~~~~~~~~~~~~~d--~----- 58 (197)
|+|.+|..+++.|+..|. ++++++...-+..+ .+-... ...+.+.++.+.+...+ +
T Consensus 6 GaGGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v~~~~~~Ipmpgh 85 (307)
T cd01486 6 GAGTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDATGIVLSIPMPGH 85 (307)
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEEEEeeeecccccc
Confidence 679999999999999994 88888876433221 111110 12344666666554332 2
Q ss_pred -----------CCHHHHHhhhhccCccEEEeccCCCccchHHHHHhCC
Q 029198 59 -----------KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALP 95 (197)
Q Consensus 59 -----------~~~~~l~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~ 95 (197)
.+.+.+.++++ ++|+||.+.-. ...+.++..+-
T Consensus 86 ~~~~~~~~~~~~~~~~l~~li~--~~DvV~d~tDn--~esR~L~~~~~ 129 (307)
T cd01486 86 PISESEVPSTLKDVKRLEELIK--DHDVIFLLTDS--RESRWLPTLLS 129 (307)
T ss_pred ccccccccccccCHHHHHHHHh--hCCEEEECCCC--HHHHHHHHHHH
Confidence 25677888888 99999988732 34455554443
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.1 Score=41.66 Aligned_cols=28 Identities=21% Similarity=0.202 Sum_probs=25.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA 30 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~ 30 (197)
|.|.||+.+++.|..-|.+|++.+|...
T Consensus 199 G~G~IG~~vA~~l~~fG~~V~~~dr~~~ 226 (385)
T PRK07574 199 GAGRIGLAVLRRLKPFDVKLHYTDRHRL 226 (385)
T ss_pred CCCHHHHHHHHHHHhCCCEEEEECCCCC
Confidence 5799999999999999999999999753
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.22 Score=38.57 Aligned_cols=28 Identities=29% Similarity=0.482 Sum_probs=25.8
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA 30 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~ 30 (197)
|+|.+|..++..|.+.||+|.+.+|++.
T Consensus 11 G~G~~G~~lA~~l~~~G~~V~~~~r~~~ 38 (308)
T PRK14619 11 GAGAWGSTLAGLASANGHRVRVWSRRSG 38 (308)
T ss_pred CccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 6799999999999999999999999764
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.078 Score=41.68 Aligned_cols=29 Identities=31% Similarity=0.434 Sum_probs=22.3
Q ss_pred CCcccchHHHHHHHHHH-CCCe---EEEEecCC
Q 029198 1 MGGTRFIGVFLSRLLVK-EGHQ---VTLFTRGK 29 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~-~g~~---V~~~~r~~ 29 (197)
+||||++|+.+++.|.+ ...+ +..++...
T Consensus 11 vGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~ 43 (347)
T PRK06728 11 VGATGAVGQKIIELLEKETKFNIAEVTLLSSKR 43 (347)
T ss_pred EeCCCHHHHHHHHHHHHCCCCCcccEEEEECcc
Confidence 59999999999999985 4555 66665543
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.27 Score=41.35 Aligned_cols=84 Identities=10% Similarity=0.063 Sum_probs=57.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc------------
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------------ 70 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~------------ 70 (197)
+-|.||.+++..|+.-|..|++.+.+-......+-.....+....+..+-++..+..+..++..+++.
T Consensus 405 ~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~eq~~t~g~~ 484 (866)
T COG4982 405 SKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDEQTETVGPQ 484 (866)
T ss_pred CCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhccccccccCCc
Confidence 45899999999999999999998877655433332222223333445677888888877777766541
Q ss_pred -------cCccEEEeccCCCccc
Q 029198 71 -------KGFDVVYDINGREADE 86 (197)
Q Consensus 71 -------~~~d~vi~~a~~~~~~ 86 (197)
-.+|.+|-+|+..+.+
T Consensus 485 s~~~k~a~~ptll~PFAAp~v~G 507 (866)
T COG4982 485 SIHIKLAWTPTLLFPFAAPRVSG 507 (866)
T ss_pred ceecccccCcceeeecccCCccC
Confidence 1478888888876543
|
|
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.38 Score=36.84 Aligned_cols=101 Identities=20% Similarity=0.217 Sum_probs=63.9
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCC---------------CchhhhhccCceEEEeecCCCHHHHHh
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE---------------SDQEFAEFSSKILHLKGDRKDYDFVKS 66 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~d~~~~~~l~~ 66 (197)
|.|.+|.++++.|+..|. +|++.+...-...+ +.+. ...++.+.++.+.+...+-.. ..+
T Consensus 26 G~gGLG~EiaKnLalaGVg~itI~D~d~ve~sn-L~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~~~---~~~ 101 (286)
T cd01491 26 GLGGLGVEIAKNLILAGVKSVTLHDTKPCSWSD-LSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVSTGPL---TTD 101 (286)
T ss_pred cCCHHHHHHHHHHHHcCCCeEEEEcCCccchhh-cccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEeccC---CHH
Confidence 678999999999999995 78888877544322 1111 112345666665554433221 123
Q ss_pred hhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecceecc
Q 029198 67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
.+. ++|+||.+.. +......+-++|+ ....+|...+.+.+|
T Consensus 102 ~l~--~fdvVV~~~~-~~~~~~~in~~c~~~~ipfI~a~~~G~~G 143 (286)
T cd01491 102 ELL--KFQVVVLTDA-SLEDQLKINEFCHSPGIKFISADTRGLFG 143 (286)
T ss_pred HHh--cCCEEEEecC-CHHHHHHHHHHHHHcCCEEEEEeccccEE
Confidence 455 8899988764 3333445666777 556888888877776
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.058 Score=45.92 Aligned_cols=80 Identities=16% Similarity=0.243 Sum_probs=58.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|.++|+++++++.+++..+... ..+...+.+|.++++-++++-- .++|.++-+...
T Consensus 407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~-----------~~g~~v~~GDat~~~~L~~agi-~~A~~vvv~~~d 474 (621)
T PRK03562 407 GFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLR-----------KFGMKVFYGDATRMDLLESAGA-AKAEVLINAIDD 474 (621)
T ss_pred ecChHHHHHHHHHHhCCCCEEEEECCHHHHHHHH-----------hcCCeEEEEeCCCHHHHHhcCC-CcCCEEEEEeCC
Confidence 5799999999999999999999999877633211 1467899999999998887643 278888866643
Q ss_pred CccchHHHHHhCC
Q 029198 83 EADEVEPILDALP 95 (197)
Q Consensus 83 ~~~~~~~ll~~~~ 95 (197)
.+....+...++
T Consensus 475 -~~~n~~i~~~ar 486 (621)
T PRK03562 475 -PQTSLQLVELVK 486 (621)
T ss_pred -HHHHHHHHHHHH
Confidence 233334444444
|
|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.14 Score=39.15 Aligned_cols=93 Identities=23% Similarity=0.251 Sum_probs=54.7
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCC---chhhhhccCceEEEeecCCCHHHHHhhhhc--------c
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES---DQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------K 71 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~--------~ 71 (197)
|.|-.|..++..|++.||+|++.+|++++....+.... .....+......++..=+.|.+++++++.. .
T Consensus 7 GLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~g~~~~~~ 86 (286)
T COG2084 7 GLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGENGLLEGLK 86 (286)
T ss_pred cCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCccchhhcCC
Confidence 57899999999999999999999999887322221100 001111223344444455666666666541 0
Q ss_pred CccEEEeccCCCccchHHHHHhCC
Q 029198 72 GFDVVYDINGREADEVEPILDALP 95 (197)
Q Consensus 72 ~~d~vi~~a~~~~~~~~~ll~~~~ 95 (197)
.=.++|.++.......+.+.+.++
T Consensus 87 ~G~i~IDmSTisp~~a~~~a~~~~ 110 (286)
T COG2084 87 PGAIVIDMSTISPETARELAAALA 110 (286)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHH
Confidence 133455566555555555555544
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.066 Score=36.75 Aligned_cols=67 Identities=13% Similarity=0.112 Sum_probs=41.5
Q ss_pred CcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|+ |.+|..+++.|.+.| ++|++.+|+++....... +. ....+..+..+.+ ++++ ++|+||++.
T Consensus 26 G~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~--------~~--~~~~~~~~~~~~~---~~~~--~~Dvvi~~~ 89 (155)
T cd01065 26 GA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAE--------RF--GELGIAIAYLDLE---ELLA--EADLIINTT 89 (155)
T ss_pred CC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH--------HH--hhcccceeecchh---hccc--cCCEEEeCc
Confidence 54 999999999999996 889999998655321110 00 0100112233333 3345 899999997
Q ss_pred CCCc
Q 029198 81 GREA 84 (197)
Q Consensus 81 ~~~~ 84 (197)
....
T Consensus 90 ~~~~ 93 (155)
T cd01065 90 PVGM 93 (155)
T ss_pred CCCC
Confidence 6654
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.12 Score=40.31 Aligned_cols=30 Identities=20% Similarity=0.127 Sum_probs=25.2
Q ss_pred CCcccchHHHHHHHHHHCC--C-----eEEEEecCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG--H-----QVTLFTRGKA 30 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~-----~V~~~~r~~~ 30 (197)
+||+|.||+.++..|+..+ . ++.+++.++.
T Consensus 10 iGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~ 46 (326)
T PRK05442 10 TGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPA 46 (326)
T ss_pred ECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCc
Confidence 5888999999999998876 3 7999998653
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.062 Score=41.64 Aligned_cols=85 Identities=20% Similarity=0.336 Sum_probs=49.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|+|-=|.+|+..|.+.||+|....|+++...+........+++ ++ ..+..++.-..++.++++ +.|+|+-..
T Consensus 8 GaGswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yL---p~-i~lp~~l~at~Dl~~a~~--~ad~iv~av-- 79 (329)
T COG0240 8 GAGSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYL---PG-ILLPPNLKATTDLAEALD--GADIIVIAV-- 79 (329)
T ss_pred cCChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCcccc---CC-ccCCcccccccCHHHHHh--cCCEEEEEC--
Confidence 5688899999999999999999999876543222111000000 11 111222333455677776 688876432
Q ss_pred CccchHHHHHhCC
Q 029198 83 EADEVEPILDALP 95 (197)
Q Consensus 83 ~~~~~~~ll~~~~ 95 (197)
+.+.++.+++.++
T Consensus 80 Ps~~~r~v~~~l~ 92 (329)
T COG0240 80 PSQALREVLRQLK 92 (329)
T ss_pred ChHHHHHHHHHHh
Confidence 3345555554443
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.29 Score=42.15 Aligned_cols=100 Identities=14% Similarity=0.079 Sum_probs=61.0
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCC---------CC-----CchhhhhccCceE--EEeecCCCHHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP---------GE-----SDQEFAEFSSKIL--HLKGDRKDYDFVK 65 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---------~~-----~~~~~~~~~~~~~--~~~~d~~~~~~l~ 65 (197)
|.|.+|+.++..|+..|. ++++++...-...+..+ +. ....+.+.++.+. .+...++ .+.+.
T Consensus 50 G~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~~i~-~~n~~ 128 (679)
T PRK14851 50 GMGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPAGIN-ADNMD 128 (679)
T ss_pred CcCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEecCCC-hHHHH
Confidence 679999999999999995 78888876433221111 00 0223345566544 4444554 56677
Q ss_pred hhhhccCccEEEeccCCCccchH-HHHHhCC-CCCcEEEEec
Q 029198 66 SSLSAKGFDVVYDINGREADEVE-PILDALP-NLEQFIYCSS 105 (197)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~-~ll~~~~-~~~~~v~~Ss 105 (197)
++++ ++|+||.+.-......+ .+.+.|+ ....+|..+.
T Consensus 129 ~~l~--~~DvVid~~D~~~~~~r~~l~~~c~~~~iP~i~~g~ 168 (679)
T PRK14851 129 AFLD--GVDVVLDGLDFFQFEIRRTLFNMAREKGIPVITAGP 168 (679)
T ss_pred HHHh--CCCEEEECCCCCcHHHHHHHHHHHHHCCCCEEEeec
Confidence 8888 99999977743212233 4555666 4456666553
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.15 Score=35.85 Aligned_cols=49 Identities=22% Similarity=0.314 Sum_probs=37.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+|+.+.+|..+++.|.+.|.+|++..|+. +++.+.+. ..|+||.+.
T Consensus 50 iG~G~~~G~~~a~~L~~~g~~V~v~~r~~--------------------------------~~l~~~l~--~aDiVIsat 95 (168)
T cd01080 50 VGRSNIVGKPLAALLLNRNATVTVCHSKT--------------------------------KNLKEHTK--QADIVIVAV 95 (168)
T ss_pred ECCcHHHHHHHHHHHhhCCCEEEEEECCc--------------------------------hhHHHHHh--hCCEEEEcC
Confidence 36655679999999999998898888752 23556676 899999887
Q ss_pred CCC
Q 029198 81 GRE 83 (197)
Q Consensus 81 ~~~ 83 (197)
+..
T Consensus 96 ~~~ 98 (168)
T cd01080 96 GKP 98 (168)
T ss_pred CCC
Confidence 764
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.31 Score=42.22 Aligned_cols=98 Identities=19% Similarity=0.171 Sum_probs=61.7
Q ss_pred CcccchHHHHHHHHHHCCC--eEEEEecCCCCccCCCCC---C----------CchhhhhccCceEEEeecC-CCHHHHH
Q 029198 2 GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPG---E----------SDQEFAEFSSKILHLKGDR-KDYDFVK 65 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~---~----------~~~~~~~~~~~~~~~~~d~-~~~~~l~ 65 (197)
|+ | +|++++..|+..|- ++++++...-+..+..+- . ...++.+.++.+.+...+- -+++.+.
T Consensus 114 G~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~~i~~~n~~ 191 (722)
T PRK07877 114 GL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTDGLTEDNVD 191 (722)
T ss_pred Ee-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEeccCCHHHHH
Confidence 55 8 99999999999993 899999875443221110 0 1123456666655555432 2477788
Q ss_pred hhhhccCccEEEeccCCCccchHHHH-HhCC-CCCcEEEEec
Q 029198 66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSS 105 (197)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll-~~~~-~~~~~v~~Ss 105 (197)
++++ ++|+|+.|.-. -.++-++ ++|. ....+|+.++
T Consensus 192 ~~l~--~~DlVvD~~D~--~~~R~~ln~~a~~~~iP~i~~~~ 229 (722)
T PRK07877 192 AFLD--GLDVVVEECDS--LDVKVLLREAARARRIPVLMATS 229 (722)
T ss_pred HHhc--CCCEEEECCCC--HHHHHHHHHHHHHcCCCEEEEcC
Confidence 8888 89999988743 2444444 4445 4456666554
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.52 Score=36.63 Aligned_cols=72 Identities=21% Similarity=0.151 Sum_probs=43.3
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
+|++|.||++++..|+..+ .++.+++.+ ...-. ..++........+.... ..+++.+.++ +.|+||-
T Consensus 6 IGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~-----alDL~~~~~~~~i~~~~--~~~~~y~~~~--daDivvi 74 (310)
T cd01337 6 LGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGV-----AADLSHINTPAKVTGYL--GPEELKKALK--GADVVVI 74 (310)
T ss_pred ECCCCHHHHHHHHHHHhCCCCcEEEEEecC--cccee-----ehHhHhCCCcceEEEec--CCCchHHhcC--CCCEEEE
Confidence 5888999999999999888 589999987 21110 01111111111222110 1122445555 9999999
Q ss_pred ccCCC
Q 029198 79 INGRE 83 (197)
Q Consensus 79 ~a~~~ 83 (197)
+||..
T Consensus 75 taG~~ 79 (310)
T cd01337 75 PAGVP 79 (310)
T ss_pred eCCCC
Confidence 99874
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.016 Score=40.25 Aligned_cols=85 Identities=21% Similarity=0.298 Sum_probs=48.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|+|-.|.+++..|.++|++|...+|+++............. ..+++..-. .+.-.++++++++ +.|+|+-+.
T Consensus 6 GaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~---~~~~~~l~~-~i~~t~dl~~a~~--~ad~Iiiav-- 77 (157)
T PF01210_consen 6 GAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPK---YLPGIKLPE-NIKATTDLEEALE--DADIIIIAV-- 77 (157)
T ss_dssp SSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETT---TSTTSBEET-TEEEESSHHHHHT--T-SEEEE-S--
T ss_pred CcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCC---CCCCcccCc-ccccccCHHHHhC--cccEEEecc--
Confidence 57999999999999999999999998754321110000000 001111110 1111234456777 889887443
Q ss_pred CccchHHHHHhCC
Q 029198 83 EADEVEPILDALP 95 (197)
Q Consensus 83 ~~~~~~~ll~~~~ 95 (197)
+....+.+++.++
T Consensus 78 Ps~~~~~~~~~l~ 90 (157)
T PF01210_consen 78 PSQAHREVLEQLA 90 (157)
T ss_dssp -GGGHHHHHHHHT
T ss_pred cHHHHHHHHHHHh
Confidence 4467788888877
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.2 Score=40.09 Aligned_cols=65 Identities=17% Similarity=0.039 Sum_probs=48.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|+|..|..++..+.+.|++|+.++.++......+ .-..+..|..|.+.+.++.++.++|.|+...
T Consensus 19 G~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~-------------ad~~~~~~~~d~~~l~~~~~~~~id~vi~~~ 83 (395)
T PRK09288 19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQV-------------AHRSHVIDMLDGDALRAVIEREKPDYIVPEI 83 (395)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCCCCchHHh-------------hhheEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence 3578999999999999999999998765421111 0124567788999998888877899998643
|
|
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.34 Score=38.90 Aligned_cols=65 Identities=17% Similarity=0.172 Sum_probs=48.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
|.|.+|+.++++|.++|+++++++.+... ... ..+..++.+|.+|++.++++--+ +++.|+-+..
T Consensus 247 G~g~lg~~v~~~L~~~g~~vvVId~d~~~--~~~-----------~~g~~vI~GD~td~e~L~~AgI~-~A~aVI~~t~ 311 (393)
T PRK10537 247 GHSPLAINTYLGLRQRGQAVTVIVPLGLE--HRL-----------PDDADLIPGDSSDSAVLKKAGAA-RARAILALRD 311 (393)
T ss_pred CCChHHHHHHHHHHHCCCCEEEEECchhh--hhc-----------cCCCcEEEeCCCCHHHHHhcCcc-cCCEEEEcCC
Confidence 56889999999999999999999865221 111 24577999999999999877532 7888886554
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.015 Score=44.51 Aligned_cols=29 Identities=17% Similarity=0.313 Sum_probs=26.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|.+|..++..|++.|++|++++++++.
T Consensus 10 GaG~mG~~iA~~la~~G~~V~l~d~~~~~ 38 (287)
T PRK08293 10 GAGVLGSQIAFQTAFHGFDVTIYDISDEA 38 (287)
T ss_pred CCCHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence 56999999999999999999999998764
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.2 Score=39.14 Aligned_cols=29 Identities=24% Similarity=0.438 Sum_probs=23.7
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGK 29 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~ 29 (197)
.||+||.|..|++.|.... .++...+.+.
T Consensus 8 vGasGYtG~EL~rlL~~Hp~ve~~~~ss~~ 37 (349)
T COG0002 8 VGASGYTGLELLRLLAGHPDVELILISSRE 37 (349)
T ss_pred EcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence 5999999999999999885 4766666654
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.31 Score=36.23 Aligned_cols=92 Identities=18% Similarity=0.274 Sum_probs=56.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
+|+++ +|..++..+...|.+|++++++++... .+. .. ..-..+ |..+. +.+. ......+|.++
T Consensus 141 ~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~-~~~--------~~-g~~~~~--~~~~~~~~~~~~-~~~~~~~d~vi 206 (271)
T cd05188 141 LGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLE-LAK--------EL-GADHVI--DYKEEDLEEELR-LTGGGGADVVI 206 (271)
T ss_pred ECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHH-HHH--------Hh-CCceec--cCCcCCHHHHHH-HhcCCCCCEEE
Confidence 47778 999999999999999999998764421 110 00 111111 22222 2222 22334799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEecce
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~~ 107 (197)
++++.. ......++.++...+++.++...
T Consensus 207 ~~~~~~-~~~~~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 207 DAVGGP-ETLAQALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred ECCCCH-HHHHHHHHhcccCCEEEEEccCC
Confidence 988742 34566677777556788777543
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.53 Score=36.61 Aligned_cols=72 Identities=21% Similarity=0.172 Sum_probs=43.9
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
+|++|.||++++..|+..+. ++.+++.++..... .++........+.... +.+++.+.++ +.|+||-
T Consensus 5 iGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a-------~DL~~~~~~~~i~~~~--~~~~~~~~~~--daDivvi 73 (312)
T TIGR01772 5 LGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVA-------ADLSHIPTAASVKGFS--GEEGLENALK--GADVVVI 73 (312)
T ss_pred ECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEE-------chhhcCCcCceEEEec--CCCchHHHcC--CCCEEEE
Confidence 58889999999999998874 89999997622111 1111111112222111 1112345566 9999999
Q ss_pred ccCCC
Q 029198 79 INGRE 83 (197)
Q Consensus 79 ~a~~~ 83 (197)
++|..
T Consensus 74 taG~~ 78 (312)
T TIGR01772 74 PAGVP 78 (312)
T ss_pred eCCCC
Confidence 99874
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.14 Score=40.53 Aligned_cols=28 Identities=21% Similarity=0.431 Sum_probs=20.8
Q ss_pred CCcccchHHHHHHHHHHC-CCe---EEEEecC
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQ---VTLFTRG 28 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~---V~~~~r~ 28 (197)
+||||++|+.+++.|++. ... +..++..
T Consensus 7 VGATG~vG~ell~llL~~~~f~~~~l~~~ss~ 38 (369)
T PRK06598 7 VGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS 38 (369)
T ss_pred EeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence 599999999999955555 444 6666554
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.23 Score=39.03 Aligned_cols=60 Identities=15% Similarity=0.164 Sum_probs=48.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
|.|.+|+-++.+-.+-|++|+.++-+++...... .-..+..+.+|++.++++.+ .+|+|-
T Consensus 8 GGGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~v-------------a~~~i~~~~dD~~al~ela~--~~DViT 67 (375)
T COG0026 8 GGGQLGRMMALAAARLGIKVIVLDPDADAPAAQV-------------ADRVIVAAYDDPEALRELAA--KCDVIT 67 (375)
T ss_pred cCcHHHHHHHHHHHhcCCEEEEecCCCCCchhhc-------------ccceeecCCCCHHHHHHHHh--hCCEEE
Confidence 5699999999999999999999998876643222 12456677789999999998 899886
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.18 Score=38.97 Aligned_cols=28 Identities=11% Similarity=0.120 Sum_probs=22.4
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecC
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRG 28 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~ 28 (197)
.|||||.|..|++.|....+ ++..+.-.
T Consensus 7 vGasGy~G~el~rlL~~HP~~el~~l~s~ 35 (310)
T TIGR01851 7 DGEAGTTGLQIRERLSGRDDIELLSIAPD 35 (310)
T ss_pred ECCCChhHHHHHHHHhCCCCeEEEEEecc
Confidence 49999999999999988853 66666543
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.49 Score=37.25 Aligned_cols=91 Identities=15% Similarity=0.197 Sum_probs=56.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCC---CH-HHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK---DY-DFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~-~~l~~~~~~~~~d~v 76 (197)
+||+|.+|...+..+...|.+|+++++++++...... +... -..+ |.. +. +.+.+... .++|++
T Consensus 165 ~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~--------~lGa-~~vi--~~~~~~~~~~~i~~~~~-~gvD~v 232 (348)
T PLN03154 165 SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN--------KLGF-DEAF--NYKEEPDLDAALKRYFP-EGIDIY 232 (348)
T ss_pred ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH--------hcCC-CEEE--ECCCcccHHHHHHHHCC-CCcEEE
Confidence 4889999999999888889999998887655221000 0111 1122 222 21 22333322 379999
Q ss_pred EeccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 77 YDINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+++.|. ......++.++...+++.++.
T Consensus 233 ~d~vG~--~~~~~~~~~l~~~G~iv~~G~ 259 (348)
T PLN03154 233 FDNVGG--DMLDAALLNMKIHGRIAVCGM 259 (348)
T ss_pred EECCCH--HHHHHHHHHhccCCEEEEECc
Confidence 999874 356677777774457776653
|
|
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.25 Score=38.06 Aligned_cols=92 Identities=23% Similarity=0.230 Sum_probs=58.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH-HHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~l~~~~~~~~~d~vi~~ 79 (197)
.|++|.+|..++..+...|.+|+.+++++++... + .+. ++..+ .+..+. ..+.+.....++|.|+++
T Consensus 153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~-~--------~~~--g~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~ 220 (325)
T cd05280 153 TGATGGVGSIAVAILAKLGYTVVALTGKEEQADY-L--------KSL--GASEV-LDREDLLDESKKPLLKARWAGAIDT 220 (325)
T ss_pred ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H--------Hhc--CCcEE-EcchhHHHHHHHHhcCCCccEEEEC
Confidence 4789999999999888889999999988655221 1 111 11111 122222 123333333479999998
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEecc
Q 029198 80 NGREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
.+. ......++.++...+++.+++.
T Consensus 221 ~~~--~~~~~~~~~l~~~g~~v~~g~~ 245 (325)
T cd05280 221 VGG--DVLANLLKQTKYGGVVASCGNA 245 (325)
T ss_pred Cch--HHHHHHHHhhcCCCEEEEEecC
Confidence 764 3567777777755678877754
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.29 Score=38.64 Aligned_cols=97 Identities=13% Similarity=0.096 Sum_probs=55.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.||+.+++.|..-|.+|++.+|+........... . ...+.-+........++.+++. ..|+|+.+.-.
T Consensus 166 G~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~L~ell~--~aDiVvl~lPl 236 (347)
T PLN02928 166 GYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLI-----P--NGDVDDLVDEKGGHEDIYEFAG--EADIVVLCCTL 236 (347)
T ss_pred CCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhcc-----c--cccccccccccCcccCHHHHHh--hCCEEEECCCC
Confidence 6799999999999999999999998743211000000 0 0000000000113445777887 88998877654
Q ss_pred Cccch-----HHHHHhCCCCCcEEEEecceec
Q 029198 83 EADEV-----EPILDALPNLEQFIYCSSAGVY 109 (197)
Q Consensus 83 ~~~~~-----~~ll~~~~~~~~~v~~Ss~~vy 109 (197)
+ ..+ ...++.|+.-.-||+++-..+.
T Consensus 237 t-~~T~~li~~~~l~~Mk~ga~lINvaRG~lV 267 (347)
T PLN02928 237 T-KETAGIVNDEFLSSMKKGALLVNIARGGLL 267 (347)
T ss_pred C-hHhhcccCHHHHhcCCCCeEEEECCCcccc
Confidence 3 233 3345555533567777655543
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.34 Score=37.78 Aligned_cols=89 Identities=12% Similarity=0.083 Sum_probs=54.5
Q ss_pred ccchHHHHHHHHHHCCCe-EEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC--HHHHHhhhhccCccEEEecc
Q 029198 4 TRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~l~~~~~~~~~d~vi~~a 80 (197)
+|.+|..++..+...|.+ |+++++++++.. .. .+. ++.. ..|..+ .+.+.++....++|+||++.
T Consensus 172 ~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~-~~--------~~~--ga~~-~i~~~~~~~~~~~~~~~~~~~d~vid~~ 239 (339)
T cd08239 172 AGPVGLGALMLARALGAEDVIGVDPSPERLE-LA--------KAL--GADF-VINSGQDDVQEIRELTSGAGADVAIECS 239 (339)
T ss_pred CCHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HH--------HHh--CCCE-EEcCCcchHHHHHHHhCCCCCCEEEECC
Confidence 489999999999889987 999888765421 11 111 1111 122222 34444444444799999998
Q ss_pred CCCccchHHHHHhCCCCCcEEEEec
Q 029198 81 GREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+.. ......++.++...+++.++.
T Consensus 240 g~~-~~~~~~~~~l~~~G~~v~~g~ 263 (339)
T cd08239 240 GNT-AARRLALEAVRPWGRLVLVGE 263 (339)
T ss_pred CCH-HHHHHHHHHhhcCCEEEEEcC
Confidence 753 233456677774457777764
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.24 Score=39.04 Aligned_cols=60 Identities=17% Similarity=0.101 Sum_probs=44.7
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
|+|.+|..++..+.+.|++|++++.++......+ . -..+..++.|++.+.++.+ .+|+|.
T Consensus 6 G~gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~------------a-d~~~~~~~~d~~~i~~~a~--~~dvit 65 (352)
T TIGR01161 6 GGGQLGRMLALAARPLGIKVHVLDPDANSPAVQV------------A-DHVVLAPFFDPAAIRELAE--SCDVIT 65 (352)
T ss_pred CCCHHHHHHHHHHHHcCCEEEEECCCCCCChhHh------------C-ceeEeCCCCCHHHHHHHHh--hCCEEE
Confidence 3489999999999999999999998765422111 1 1234678889999988887 678764
|
Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. |
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.6 Score=35.89 Aligned_cols=92 Identities=14% Similarity=0.113 Sum_probs=57.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
.|++|.+|..++..+...|.+|+++++++++.. .+. +. ++. ...+..+. +.+.+.....++|.|+
T Consensus 145 ~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~-~~~--------~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vl 212 (323)
T cd05282 145 NAANSAVGRMLIQLAKLLGFKTINVVRRDEQVE-ELK--------AL--GAD-EVIDSSPEDLAQRVKEATGGAGARLAL 212 (323)
T ss_pred cccccHHHHHHHHHHHHCCCeEEEEecChHHHH-HHH--------hc--CCC-EEecccchhHHHHHHHHhcCCCceEEE
Confidence 488999999999999999999999988765521 111 00 111 11122222 3344444445799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEecc
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
++.+. ......++.++...+++.++..
T Consensus 213 ~~~g~--~~~~~~~~~l~~~g~~v~~g~~ 239 (323)
T cd05282 213 DAVGG--ESATRLARSLRPGGTLVNYGLL 239 (323)
T ss_pred ECCCC--HHHHHHHHhhCCCCEEEEEccC
Confidence 98874 2345666777755678877653
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.18 Score=39.18 Aligned_cols=28 Identities=11% Similarity=0.151 Sum_probs=22.7
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecC
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRG 28 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~ 28 (197)
+||||++|..|++.|.+..+ ++..+..+
T Consensus 8 vGAtGy~G~eLlrlL~~hp~~~l~~~~s~ 36 (313)
T PRK11863 8 DGEAGTTGLQIRERLAGRSDIELLSIPEA 36 (313)
T ss_pred ECCCCHHHHHHHHHHhcCCCeEEEEEecC
Confidence 59999999999999988864 66666544
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.32 Score=38.31 Aligned_cols=29 Identities=21% Similarity=0.384 Sum_probs=24.1
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGK 29 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~ 29 (197)
+||||++|++|++.|.+.. .++..+..+.
T Consensus 6 vGatG~~G~~L~~~l~~~~~~~l~~v~~~~ 35 (341)
T TIGR00978 6 LGATGLVGQKFVKLLAKHPYFELAKVVASP 35 (341)
T ss_pred ECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence 5999999999999998876 5888885543
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=93.63 E-value=0.44 Score=36.35 Aligned_cols=93 Identities=22% Similarity=0.244 Sum_probs=57.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~~ 79 (197)
+|++|.+|..++..+...|.+|+.++++++... .+ .+.... ..+..+-.+ .+.+.......++|.++++
T Consensus 146 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~-~~--------~~~g~~-~~~~~~~~~~~~~i~~~~~~~~~d~v~~~ 215 (323)
T cd08241 146 LGAAGGVGLAAVQLAKALGARVIAAASSEEKLA-LA--------RALGAD-HVIDYRDPDLRERVKALTGGRGVDVVYDP 215 (323)
T ss_pred EcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH-HH--------HHcCCc-eeeecCCccHHHHHHHHcCCCCcEEEEEC
Confidence 478899999999999999999999988765421 11 011111 111111111 2344444444579999998
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEec
Q 029198 80 NGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.+. ......++.++...+++.++.
T Consensus 216 ~g~--~~~~~~~~~~~~~g~~v~~~~ 239 (323)
T cd08241 216 VGG--DVFEASLRSLAWGGRLLVIGF 239 (323)
T ss_pred ccH--HHHHHHHHhhccCCEEEEEcc
Confidence 874 345556677764457777764
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.042 Score=45.45 Aligned_cols=30 Identities=20% Similarity=0.211 Sum_probs=27.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|+|.+|..++..|++.|++|++.+++++..
T Consensus 11 G~G~MG~~iA~~la~~G~~V~v~D~~~~~~ 40 (495)
T PRK07531 11 GGGVIGGGWAARFLLAGIDVAVFDPHPEAE 40 (495)
T ss_pred CcCHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 679999999999999999999999987663
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.33 Score=39.73 Aligned_cols=82 Identities=13% Similarity=0.056 Sum_probs=53.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.||+.++..+...|.+|+++.+++....... ..++..+ + +.+++. ..|+||.+.+.
T Consensus 261 GyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-----------~~G~~vv-----~---leEal~--~ADVVI~tTGt 319 (477)
T PLN02494 261 GYGDVGKGCAAAMKAAGARVIVTEIDPICALQAL-----------MEGYQVL-----T---LEDVVS--EADIFVTTTGN 319 (477)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-----------hcCCeec-----c---HHHHHh--hCCEEEECCCC
Confidence 6799999999999999999999998765421110 0122221 1 334555 78999986664
Q ss_pred CccchHHHHHhCCCCCcEEEEec
Q 029198 83 EADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
...-....++.|+.-..+++++.
T Consensus 320 ~~vI~~e~L~~MK~GAiLiNvGr 342 (477)
T PLN02494 320 KDIIMVDHMRKMKNNAIVCNIGH 342 (477)
T ss_pred ccchHHHHHhcCCCCCEEEEcCC
Confidence 32223567777774457777765
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.28 Score=39.75 Aligned_cols=82 Identities=11% Similarity=0.017 Sum_probs=50.8
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|..++..|...|.+|++.++++....... ..++... + +.++++ ++|+||.+.+.
T Consensus 219 G~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-----------~~G~~v~-----~---l~eal~--~aDVVI~aTG~ 277 (425)
T PRK05476 219 GYGDVGKGCAQRLRGLGARVIVTEVDPICALQAA-----------MDGFRVM-----T---MEEAAE--LGDIFVTATGN 277 (425)
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-----------hcCCEec-----C---HHHHHh--CCCEEEECCCC
Confidence 5699999999999999999999998765521100 0122211 2 334555 89999988754
Q ss_pred CccchHHHHHhCCCCCcEEEEec
Q 029198 83 EADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
...-....++.++.-..+++++.
T Consensus 278 ~~vI~~~~~~~mK~GailiNvG~ 300 (425)
T PRK05476 278 KDVITAEHMEAMKDGAILANIGH 300 (425)
T ss_pred HHHHHHHHHhcCCCCCEEEEcCC
Confidence 21111245566664346666654
|
|
| >PRK06487 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.32 Score=37.87 Aligned_cols=26 Identities=23% Similarity=0.157 Sum_probs=23.7
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRG 28 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~ 28 (197)
|.|.||+.+++.|..-|.+|++.+|.
T Consensus 155 G~G~IG~~vA~~l~~fgm~V~~~~~~ 180 (317)
T PRK06487 155 GHGELGGAVARLAEAFGMRVLIGQLP 180 (317)
T ss_pred CCCHHHHHHHHHHhhCCCEEEEECCC
Confidence 57999999999999889999999875
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.033 Score=42.68 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=27.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|+|.+|..++..|++.|++|++++++++..
T Consensus 8 G~G~mG~~iA~~la~~G~~V~~~d~~~~~~ 37 (288)
T PRK09260 8 GAGVMGRGIAYVFAVSGFQTTLVDIKQEQL 37 (288)
T ss_pred CccHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence 569999999999999999999999987664
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.1 Score=40.04 Aligned_cols=30 Identities=17% Similarity=0.314 Sum_probs=27.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|+|.+|..++..|+..|++|++++++++..
T Consensus 12 GaG~mG~~iA~~~a~~G~~V~l~d~~~~~~ 41 (286)
T PRK07819 12 GAGQMGAGIAEVCARAGVDVLVFETTEELA 41 (286)
T ss_pred cccHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 469999999999999999999999998764
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.45 Score=37.26 Aligned_cols=88 Identities=13% Similarity=0.184 Sum_probs=53.3
Q ss_pred ccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEeccC
Q 029198 4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDING 81 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~a~ 81 (197)
+|.+|...+..+...|. +|+++++++++.. .. .+. +... ..|..+.+ +.+..+.. .+|+||.+.|
T Consensus 178 ~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~-~a--------~~l--Ga~~-vi~~~~~~-~~~~~~~~g~~D~vid~~G 244 (343)
T PRK09880 178 VGPIGCLIVAAVKTLGAAEIVCADVSPRSLS-LA--------REM--GADK-LVNPQNDD-LDHYKAEKGYFDVSFEVSG 244 (343)
T ss_pred CCHHHHHHHHHHHHcCCcEEEEEeCCHHHHH-HH--------HHc--CCcE-EecCCccc-HHHHhccCCCCCEEEECCC
Confidence 59999999998888897 6888988866532 11 111 1111 12333221 22222211 4899999988
Q ss_pred CCccchHHHHHhCCCCCcEEEEec
Q 029198 82 READEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.. ......++.++...+++.++.
T Consensus 245 ~~-~~~~~~~~~l~~~G~iv~~G~ 267 (343)
T PRK09880 245 HP-SSINTCLEVTRAKGVMVQVGM 267 (343)
T ss_pred CH-HHHHHHHHHhhcCCEEEEEcc
Confidence 53 345677788884467887763
|
|
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.40 E-value=0.063 Score=43.01 Aligned_cols=30 Identities=23% Similarity=0.404 Sum_probs=25.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCcc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA 33 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~ 33 (197)
|+|++|..++..|+ .||+|+++++++++..
T Consensus 7 GlGyvGl~~A~~lA-~G~~VigvD~d~~kv~ 36 (388)
T PRK15057 7 GTGYVGLSNGLLIA-QNHEVVALDILPSRVA 36 (388)
T ss_pred CCCHHHHHHHHHHH-hCCcEEEEECCHHHHH
Confidence 68999999996665 5999999999987754
|
|
| >TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.29 Score=37.53 Aligned_cols=30 Identities=27% Similarity=0.357 Sum_probs=27.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|.|.+|..+++.|++.|++|++.+|++++.
T Consensus 3 GlG~mG~~mA~~L~~~G~~V~v~dr~~~~~ 32 (288)
T TIGR01692 3 GLGNMGGPMAANLLKAGHPVRVFDLFPDAV 32 (288)
T ss_pred cccHhHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 679999999999999999999999987653
|
This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.26 Score=37.98 Aligned_cols=28 Identities=21% Similarity=0.400 Sum_probs=25.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecC
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG 28 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~ 28 (197)
+|.+|.+|..++..|+++|+.|+...++
T Consensus 165 IG~s~ivG~PmA~~L~~~gatVtv~~~~ 192 (301)
T PRK14194 165 IGRSNIVGKPMAALLLQAHCSVTVVHSR 192 (301)
T ss_pred ECCCCccHHHHHHHHHHCCCEEEEECCC
Confidence 4777899999999999999999999764
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.29 Score=39.50 Aligned_cols=82 Identities=11% Similarity=0.030 Sum_probs=52.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|..++..+...|.+|+++++++.+.... . ..++..+ +. .+++. ..|+||.+.|.
T Consensus 209 G~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A---------~--~~G~~~~-----~~---~e~v~--~aDVVI~atG~ 267 (413)
T cd00401 209 GYGDVGKGCAQSLRGQGARVIVTEVDPICALQA---------A--MEGYEVM-----TM---EEAVK--EGDIFVTTTGN 267 (413)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECChhhHHHH---------H--hcCCEEc-----cH---HHHHc--CCCEEEECCCC
Confidence 679999999999999999999998876552210 0 0122222 11 23444 78999998874
Q ss_pred CccchHHHHHhCCCCCcEEEEec
Q 029198 83 EADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
...-....++.++.-..+++++.
T Consensus 268 ~~~i~~~~l~~mk~GgilvnvG~ 290 (413)
T cd00401 268 KDIITGEHFEQMKDGAIVCNIGH 290 (413)
T ss_pred HHHHHHHHHhcCCCCcEEEEeCC
Confidence 32122335777774457777773
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.55 Score=37.18 Aligned_cols=90 Identities=14% Similarity=0.139 Sum_probs=56.4
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
.|+|.+|..++..+...|.+|++++.++++...... + -++..+ .+..+.+.+.+... ++|+||.+.+
T Consensus 190 ~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~--------~--~Ga~~v-i~~~~~~~~~~~~~--~~D~vid~~g 256 (360)
T PLN02586 190 AGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN--------R--LGADSF-LVSTDPEKMKAAIG--TMDYIIDTVS 256 (360)
T ss_pred ECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH--------h--CCCcEE-EcCCCHHHHHhhcC--CCCEEEECCC
Confidence 356999999999998899999888876654221111 0 112111 13334445555444 6899999987
Q ss_pred CCccchHHHHHhCCCCCcEEEEec
Q 029198 82 READEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
. .......++.++...+++.++.
T Consensus 257 ~-~~~~~~~~~~l~~~G~iv~vG~ 279 (360)
T PLN02586 257 A-VHALGPLLGLLKVNGKLITLGL 279 (360)
T ss_pred C-HHHHHHHHHHhcCCcEEEEeCC
Confidence 3 2345667788874467877763
|
|
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.44 Score=36.84 Aligned_cols=93 Identities=17% Similarity=0.148 Sum_probs=58.2
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCC-CHHHHHhhhhccCccEEEecc
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~l~~~~~~~~~d~vi~~a 80 (197)
||+|.+|..++..+...|.+|+++++++++.. .+ .+... -.++..+-. -.+.+..+....++|.++++.
T Consensus 148 g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~-~~--------~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 217 (327)
T PRK10754 148 AAAGGVGLIACQWAKALGAKLIGTVGSAQKAQ-RA--------KKAGA-WQVINYREENIVERVKEITGGKKVRVVYDSV 217 (327)
T ss_pred eCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH--------HHCCC-CEEEcCCCCcHHHHHHHHcCCCCeEEEEECC
Confidence 78999999999999899999999988765421 11 11111 122222211 223455555545799999987
Q ss_pred CCCccchHHHHHhCCCCCcEEEEecc
Q 029198 81 GREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
+. ......++.++...+++.++..
T Consensus 218 ~~--~~~~~~~~~l~~~g~~v~~g~~ 241 (327)
T PRK10754 218 GK--DTWEASLDCLQRRGLMVSFGNA 241 (327)
T ss_pred cH--HHHHHHHHHhccCCEEEEEccC
Confidence 63 3455566777655688877643
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.19 Score=45.53 Aligned_cols=142 Identities=12% Similarity=0.107 Sum_probs=87.6
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~----~~~d~ 75 (197)
+||-|..|-.|+..|..+|. .++..+|+--+ +.++...-.++....-.+.+-..|++..+..+.+++. ..+-.
T Consensus 1774 ~GGLGGFGLELaqWLi~RGar~lVLtSRsGir--tGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~vGG 1851 (2376)
T KOG1202|consen 1774 VGGLGGFGLELAQWLIQRGARKLVLTSRSGIR--TGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLGPVGG 1851 (2376)
T ss_pred eccccchhHHHHHHHHhcCceEEEEeccccch--hhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcccccc
Confidence 58999999999999999996 56677776433 2222222234444444566666788877766666652 25677
Q ss_pred EEeccCCCc------cc--------------hHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCCCCCcchh
Q 029198 76 VYDINGREA------DE--------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (197)
Q Consensus 76 vi~~a~~~~------~~--------------~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~~~ 131 (197)
|||+|..-- +. +.++=...+ ..+.||.+||...-..+.. ..+|.-+
T Consensus 1852 iFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~G----------QtNYG~a 1921 (2376)
T KOG1202|consen 1852 IFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAG----------QTNYGLA 1921 (2376)
T ss_pred hhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCc----------ccccchh
Confidence 888876521 12 222222222 4567999998765322211 2233377
Q ss_pred hhhHHHHHhh---cCCcEEEEcccee
Q 029198 132 KLNTESVLES---KGVNWTSLRPVYI 154 (197)
Q Consensus 132 k~~~e~~~~~---~~~~~~i~r~~~i 154 (197)
-..+|+++++ .|+|-+.+.-|.|
T Consensus 1922 NS~MERiceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1922 NSAMERICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred hHHHHHHHHHhhhcCCCcceeeeecc
Confidence 7889998853 6788777776655
|
|
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.75 Score=35.91 Aligned_cols=91 Identities=22% Similarity=0.222 Sum_probs=57.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+|++|.+|..++..+...|.+|++++++. . .... .+. ++. ...+..+.+....+....++|.++++.
T Consensus 169 ~g~~g~ig~~~~~~a~~~G~~v~~~~~~~-~-~~~~--------~~~--g~~-~~~~~~~~~~~~~l~~~~~vd~vi~~~ 235 (350)
T cd08248 169 LGGSGGVGTFAIQLLKAWGAHVTTTCSTD-A-IPLV--------KSL--GAD-DVIDYNNEDFEEELTERGKFDVILDTV 235 (350)
T ss_pred ECCCChHHHHHHHHHHHCCCeEEEEeCcc-h-HHHH--------HHh--CCc-eEEECCChhHHHHHHhcCCCCEEEECC
Confidence 47899999999999999999999888642 1 1110 111 111 112333333333333334799999998
Q ss_pred CCCccchHHHHHhCCCCCcEEEEecc
Q 029198 81 GREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
+.. .....++.++...+++.++..
T Consensus 236 g~~--~~~~~~~~l~~~G~~v~~g~~ 259 (350)
T cd08248 236 GGD--TEKWALKLLKKGGTYVTLVSP 259 (350)
T ss_pred ChH--HHHHHHHHhccCCEEEEecCC
Confidence 753 566677777755788887643
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.21 Score=38.31 Aligned_cols=30 Identities=17% Similarity=0.180 Sum_probs=27.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|+|.+|..++..|++.|++|++++++++..
T Consensus 11 GaG~mG~~iA~~la~~G~~V~l~d~~~~~~ 40 (292)
T PRK07530 11 GAGQMGNGIAHVCALAGYDVLLNDVSADRL 40 (292)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 569999999999999999999999987653
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.072 Score=40.92 Aligned_cols=29 Identities=24% Similarity=0.469 Sum_probs=26.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|.+|..++..|++.|++|++.+|+++.
T Consensus 9 G~G~mG~~~a~~l~~~g~~v~~~d~~~~~ 37 (296)
T PRK11559 9 GLGIMGKPMSKNLLKAGYSLVVYDRNPEA 37 (296)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence 57999999999999999999999987654
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=93.21 E-value=0.91 Score=33.75 Aligned_cols=103 Identities=12% Similarity=0.123 Sum_probs=61.9
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCC---------------chhhhhccCc--eEEEeecCCCHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGES---------------DQEFAEFSSK--ILHLKGDRKDYDFV 64 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~~--~~~~~~d~~~~~~l 64 (197)
|+|.+|.++++.|+..|. ++++++...-+..+ +.+.. ...+.+.++. ++.+..++.+.+..
T Consensus 6 G~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sN-LnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~~~~~ 84 (234)
T cd01484 6 GAGGIGCELLKNLALMGFGQIHVIDMDTIDVSN-LNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGPEQDF 84 (234)
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEEeCCEEcchh-hccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCChhhhc
Confidence 679999999999999995 88888887543221 11110 1122344554 44555566543332
Q ss_pred -HhhhhccCccEEEeccCCCccchHH-HHHhCC-CCCcEEEEecceecc
Q 029198 65 -KSSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 65 -~~~~~~~~~d~vi~~a~~~~~~~~~-ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
...++ ++|+|+.+.- +.. .+. +-+.+. ....+|..++.+.+|
T Consensus 85 ~~~f~~--~~DvVi~a~D-n~~-aR~~ln~~c~~~~iplI~~g~~G~~G 129 (234)
T cd01484 85 NDTFFE--QFHIIVNALD-NII-ARRYVNGMLIFLIVPLIESGTEGFKG 129 (234)
T ss_pred hHHHHh--CCCEEEECCC-CHH-HHHHHHHHHHHcCCCEEEEcccCCce
Confidence 35566 8999998754 323 343 444445 445777777766655
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.51 Score=36.48 Aligned_cols=92 Identities=15% Similarity=0.178 Sum_probs=56.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
+|++|.+|..++..+.+.|.+|+.+++++.+.... .+...--.++ +..+. +.+.+... .++|+++
T Consensus 152 ~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~---------~~~~g~~~~~--~~~~~~~~~~v~~~~~-~~~d~vi 219 (329)
T cd05288 152 SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWL---------VEELGFDAAI--NYKTPDLAEALKEAAP-DGIDVYF 219 (329)
T ss_pred ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HhhcCCceEE--ecCChhHHHHHHHhcc-CCceEEE
Confidence 47899999999999999999999998876542110 0000111122 22232 22333332 4799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEecc
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
++.+. ......++.++...+++.+++.
T Consensus 220 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~ 246 (329)
T cd05288 220 DNVGG--EILDAALTLLNKGGRIALCGAI 246 (329)
T ss_pred EcchH--HHHHHHHHhcCCCceEEEEeec
Confidence 98874 3556667777744578877653
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.15 Score=41.93 Aligned_cols=30 Identities=17% Similarity=0.367 Sum_probs=27.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|.|-.|.+++..|++.||+|++.+|++++.
T Consensus 8 GLG~MG~~lA~nL~~~G~~V~v~dr~~~~~ 37 (470)
T PTZ00142 8 GLAVMGQNLALNIASRGFKISVYNRTYEKT 37 (470)
T ss_pred eEhHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 579999999999999999999999987764
|
|
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.43 Score=37.29 Aligned_cols=29 Identities=21% Similarity=0.159 Sum_probs=25.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|.||+.++..|..-|.+|.+.++....
T Consensus 149 G~G~IG~~va~~l~afgm~v~~~d~~~~~ 177 (324)
T COG0111 149 GLGRIGRAVAKRLKAFGMKVIGYDPYSPR 177 (324)
T ss_pred CCCHHHHHHHHHHHhCCCeEEEECCCCch
Confidence 67999999999999999999999994333
|
|
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.091 Score=37.53 Aligned_cols=31 Identities=26% Similarity=0.454 Sum_probs=24.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCcc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA 33 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~ 33 (197)
|.||+|..++..|++.||+|++++.+++...
T Consensus 7 GlGyvGl~~A~~lA~~G~~V~g~D~~~~~v~ 37 (185)
T PF03721_consen 7 GLGYVGLPLAAALAEKGHQVIGVDIDEEKVE 37 (185)
T ss_dssp --STTHHHHHHHHHHTTSEEEEE-S-HHHHH
T ss_pred CCCcchHHHHHHHHhCCCEEEEEeCChHHHH
Confidence 6899999999999999999999999987643
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.032 Score=43.21 Aligned_cols=29 Identities=24% Similarity=0.375 Sum_probs=26.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|.+|..++..|++.|++|++++++++.
T Consensus 11 GaG~mG~~iA~~l~~~g~~V~~~d~~~~~ 39 (311)
T PRK06130 11 GAGTMGSGIAALFARKGLQVVLIDVMEGA 39 (311)
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 56999999999999999999999997755
|
|
| >cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1 | Back alignment and domain information |
|---|
Probab=93.12 E-value=0.78 Score=37.27 Aligned_cols=105 Identities=19% Similarity=0.199 Sum_probs=63.8
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccC---C-CCC-----C-----CchhhhhccCceE--EEeecCCCH-HHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQ---Q-LPG-----E-----SDQEFAEFSSKIL--HLKGDRKDY-DFV 64 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~-~~~-----~-----~~~~~~~~~~~~~--~~~~d~~~~-~~l 64 (197)
|+|.+|..++..|...|. ++++++...-.... . +.. . ....+.+.++.+. ++..++.+. +..
T Consensus 27 G~gglGsEilKNLvL~GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp~V~i~~~~e~~~~ll~~~ 106 (425)
T cd01493 27 NATATGTEILKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPDVNGSAVEESPEALLDND 106 (425)
T ss_pred cCcHHHHHHHHHHHHcCCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCCCCEEEEEecccchhhhhH
Confidence 456699999999999995 78888876433211 1 110 0 0112456677664 443333331 223
Q ss_pred HhhhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecceecc
Q 029198 65 KSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 65 ~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
..++. ++|+||.+. .+......+.+.|+ ....+|+.+|.+.||
T Consensus 107 ~~f~~--~fdiVI~t~-~~~~~~~~L~~~c~~~~iPlI~~~s~G~~G 150 (425)
T cd01493 107 PSFFS--QFTVVIATN-LPESTLLRLADVLWSANIPLLYVRSYGLYG 150 (425)
T ss_pred HHHhc--CCCEEEECC-CCHHHHHHHHHHHHHcCCCEEEEecccCEE
Confidence 45566 889998643 23333345666677 557899999999888
|
APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain. |
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.2 Score=30.30 Aligned_cols=29 Identities=38% Similarity=0.581 Sum_probs=27.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|++|..++..|.+.|.+|+.+.|.+.-
T Consensus 6 GgG~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 6 GGGFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp SSSHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred CcCHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 67999999999999999999999998776
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.46 Score=37.94 Aligned_cols=26 Identities=23% Similarity=0.164 Sum_probs=23.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRG 28 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~ 28 (197)
|.|.||+.+++.|..-|.+|.+.++.
T Consensus 123 G~G~IG~~vA~~l~a~G~~V~~~dp~ 148 (378)
T PRK15438 123 GVGNVGRRLQARLEALGIKTLLCDPP 148 (378)
T ss_pred CcCHHHHHHHHHHHHCCCEEEEECCc
Confidence 67999999999999999999999864
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.23 Score=38.75 Aligned_cols=29 Identities=28% Similarity=0.332 Sum_probs=26.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|-+|..++..|++.|++|.+++|+++.
T Consensus 11 G~G~mG~~ia~~L~~~G~~V~~~~r~~~~ 39 (328)
T PRK14618 11 GAGAWGTALAVLAASKGVPVRLWARRPEF 39 (328)
T ss_pred CcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 57999999999999999999999997654
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=93.03 E-value=0.46 Score=37.01 Aligned_cols=68 Identities=18% Similarity=0.226 Sum_probs=43.0
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEecCCCCccCCCCCCCchhhhhcc---CceEEEeecCCCHHHHHhhhhccCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFS---SKILHLKGDRKDYDFVKSSLSAKGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~l~~~~~~~~~d~ 75 (197)
+|+ |.+|+.++..|+..|. ++.+++++++...... .++.... ..+.+.. .+.+ .++ ++|+
T Consensus 12 iGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~-----~Dl~~~~~~~~~~~i~~---~~~~----~~~--~adi 76 (315)
T PRK00066 12 VGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDA-----MDLSHAVPFTSPTKIYA---GDYS----DCK--DADL 76 (315)
T ss_pred ECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHH-----HHHHhhccccCCeEEEe---CCHH----HhC--CCCE
Confidence 466 9999999999999985 8999999766532111 1111111 1222222 2333 244 9999
Q ss_pred EEeccCCC
Q 029198 76 VYDINGRE 83 (197)
Q Consensus 76 vi~~a~~~ 83 (197)
||.++|..
T Consensus 77 vIitag~~ 84 (315)
T PRK00066 77 VVITAGAP 84 (315)
T ss_pred EEEecCCC
Confidence 99999874
|
|
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.62 Score=35.44 Aligned_cols=93 Identities=19% Similarity=0.207 Sum_probs=56.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~~ 79 (197)
.|++|.+|..++..+...|.+|+++++++++.. .+. .. .--.++..+-.+ .+.+.......++|.++++
T Consensus 143 ~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~-~~~--------~~-g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~ 212 (320)
T cd05286 143 HAAAGGVGLLLTQWAKALGATVIGTVSSEEKAE-LAR--------AA-GADHVINYRDEDFVERVREITGGRGVDVVYDG 212 (320)
T ss_pred EcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHH--------HC-CCCEEEeCCchhHHHHHHHHcCCCCeeEEEEC
Confidence 478999999999999999999999987655421 111 11 101122111111 1233444434579999998
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEec
Q 029198 80 NGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.+. ......++.++...+++.++.
T Consensus 213 ~~~--~~~~~~~~~l~~~g~~v~~g~ 236 (320)
T cd05286 213 VGK--DTFEGSLDSLRPRGTLVSFGN 236 (320)
T ss_pred CCc--HhHHHHHHhhccCcEEEEEec
Confidence 764 345556666664567887764
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.51 Score=36.68 Aligned_cols=27 Identities=19% Similarity=0.317 Sum_probs=24.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGK 29 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~ 29 (197)
|.|.||+.+++.|..-|.+|.+.+|..
T Consensus 152 G~G~IG~~vA~~~~~fgm~V~~~d~~~ 178 (311)
T PRK08410 152 GLGTIGKRVAKIAQAFGAKVVYYSTSG 178 (311)
T ss_pred CCCHHHHHHHHHHhhcCCEEEEECCCc
Confidence 679999999999998899999999864
|
|
| >PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway | Back alignment and domain information |
|---|
Probab=92.88 E-value=0.034 Score=36.41 Aligned_cols=87 Identities=15% Similarity=0.098 Sum_probs=44.7
Q ss_pred cccchHHHHHHHHHHC----CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 3 GTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 3 atG~vG~~l~~~L~~~----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|.|.||+.++++|.+. +.+|.++..+. ...... .....+...+. .+ +.++++...+|+||.
T Consensus 1 G~G~VG~~l~~~l~~~~~~~~~~v~~v~~~~-~~~~~~-------~~~~~~~~~~~----~~---~~~~~~~~~~dvvVE 65 (117)
T PF03447_consen 1 GFGNVGRGLLEQLKEQQERIDLEVVGVADRS-MLISKD-------WAASFPDEAFT----TD---LEELIDDPDIDVVVE 65 (117)
T ss_dssp --SHHHHHHHHHHHHTHHHCEEEEEEEEESS-EEEETT-------HHHHHTHSCEE----SS---HHHHHTHTT-SEEEE
T ss_pred CCCHHHHHHHHHHHhCcccCCEEEEEEEECC-chhhhh-------hhhhccccccc----CC---HHHHhcCcCCCEEEE
Confidence 6799999999999987 46777777665 211100 00000111111 22 334444337999999
Q ss_pred ccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 79 INGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+++. .....-..++++.-+++|.+|-
T Consensus 66 ~t~~-~~~~~~~~~~L~~G~~VVt~nk 91 (117)
T PF03447_consen 66 CTSS-EAVAEYYEKALERGKHVVTANK 91 (117)
T ss_dssp -SSC-HHHHHHHHHHHHTTCEEEES-H
T ss_pred CCCc-hHHHHHHHHHHHCCCeEEEECH
Confidence 9553 2223334455555568887664
|
Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D .... |
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=92.88 E-value=0.24 Score=38.20 Aligned_cols=29 Identities=21% Similarity=0.350 Sum_probs=26.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|.+|..+++.|++.|++|++.+|++++
T Consensus 7 GlG~mG~~mA~~L~~~g~~v~v~dr~~~~ 35 (299)
T PRK12490 7 GLGKMGGNMAERLREDGHEVVGYDVNQEA 35 (299)
T ss_pred cccHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 57999999999999999999999998654
|
|
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.81 E-value=0.86 Score=35.18 Aligned_cols=90 Identities=18% Similarity=0.182 Sum_probs=55.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC----HHHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~l~~~~~~~~~d~v 76 (197)
+|++|.+|..++..+.+.|..++.++++++... .+ ... ++. ...+..+ .+.+.+.....++|.+
T Consensus 147 ~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~-~~--------~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~ 214 (334)
T PTZ00354 147 HAGASGVGTAAAQLAEKYGAATIITTSSEEKVD-FC--------KKL--AAI-ILIRYPDEEGFAPKVKKLTGEKGVNLV 214 (334)
T ss_pred EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH--------HHc--CCc-EEEecCChhHHHHHHHHHhCCCCceEE
Confidence 488999999999999999999888887755421 11 111 111 1112222 2334444444579999
Q ss_pred EeccCCCccchHHHHHhCCCCCcEEEEe
Q 029198 77 YDINGREADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
+++.+. ......++.+....+++.++
T Consensus 215 i~~~~~--~~~~~~~~~l~~~g~~i~~~ 240 (334)
T PTZ00354 215 LDCVGG--SYLSETAEVLAVDGKWIVYG 240 (334)
T ss_pred EECCch--HHHHHHHHHhccCCeEEEEe
Confidence 998763 45566677776445777665
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=92.81 E-value=0.28 Score=37.90 Aligned_cols=30 Identities=27% Similarity=0.492 Sum_probs=27.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|.|.+|+.+++.|++.|++|++.+|++++.
T Consensus 7 GlG~MG~~mA~~L~~~g~~v~v~dr~~~~~ 36 (301)
T PRK09599 7 GLGRMGGNMARRLLRGGHEVVGYDRNPEAV 36 (301)
T ss_pred cccHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 579999999999999999999999987653
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.79 E-value=0.53 Score=37.68 Aligned_cols=72 Identities=21% Similarity=0.260 Sum_probs=46.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH----HHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~l~~~~~~~~~d~v 76 (197)
||+...+|..+++.|.+.|++|++++..+.... .......+...+...-.+. +.+.++.++.++|+|
T Consensus 10 ~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~---------~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 10 TGARAPAALELARLFHNAGHTVILADSLKYPLS---------RFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHH---------HHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 688888999999999999999999998754321 0011112222222122232 455566666789999
Q ss_pred EeccC
Q 029198 77 YDING 81 (197)
Q Consensus 77 i~~a~ 81 (197)
|-+..
T Consensus 81 IP~~e 85 (389)
T PRK06849 81 IPTCE 85 (389)
T ss_pred EECCh
Confidence 96543
|
|
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.83 Score=34.95 Aligned_cols=90 Identities=23% Similarity=0.233 Sum_probs=57.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~~ 79 (197)
.|++|.+|..++..+...|.+|+.+++++++.. .+ .+. ++..+..+-.+ .+.+.+. ..++|.++++
T Consensus 149 ~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~-~~--------~~~--g~~~~~~~~~~~~~~i~~~--~~~~d~vl~~ 215 (320)
T cd08243 149 RGGTSSVGLAALKLAKALGATVTATTRSPERAA-LL--------KEL--GADEVVIDDGAIAEQLRAA--PGGFDKVLEL 215 (320)
T ss_pred EcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH--------Hhc--CCcEEEecCccHHHHHHHh--CCCceEEEEC
Confidence 478999999999999999999999988765421 11 111 12111111111 2334444 3589999998
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEec
Q 029198 80 NGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.+. ......++.++...+++.++.
T Consensus 216 ~~~--~~~~~~~~~l~~~g~~v~~g~ 239 (320)
T cd08243 216 VGT--ATLKDSLRHLRPGGIVCMTGL 239 (320)
T ss_pred CCh--HHHHHHHHHhccCCEEEEEcc
Confidence 874 345666777774467777764
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=92.70 E-value=0.44 Score=37.81 Aligned_cols=76 Identities=17% Similarity=0.230 Sum_probs=41.2
Q ss_pred CCcccchHHHHHHHHH-HCCC---eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLV-KEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~-~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~v 76 (197)
+||||.+|+.+++.|. ++.. +++.++........... .+-....-++.+.+ .+. ++|++
T Consensus 6 vGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f-----------~~~~~~v~~~~~~~----~~~--~vDiv 68 (366)
T TIGR01745 6 VGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSF-----------GGTTGTLQDAFDID----ALK--ALDII 68 (366)
T ss_pred EcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCC-----------CCCcceEEcCcccc----ccc--CCCEE
Confidence 5999999999999999 5453 44555443322111100 11111222232221 234 89999
Q ss_pred EeccCCCccchHHHHHhCC
Q 029198 77 YDINGREADEVEPILDALP 95 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~ 95 (197)
|.+++.. -.+.+...+.
T Consensus 69 ffa~g~~--~s~~~~p~~~ 85 (366)
T TIGR01745 69 ITCQGGD--YTNEIYPKLR 85 (366)
T ss_pred EEcCCHH--HHHHHHHHHH
Confidence 9888653 4445555444
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=92.69 E-value=0.25 Score=38.29 Aligned_cols=67 Identities=16% Similarity=0.287 Sum_probs=42.2
Q ss_pred CcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhc---c--CceEEEeecCCCHHHHHhhhhccCcc
Q 029198 2 GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEF---S--SKILHLKGDRKDYDFVKSSLSAKGFD 74 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~d~~~~~~l~~~~~~~~~d 74 (197)
|+ |.||+.++..|+..+ .++++++..++...... .++... . ..+.+..+ |.+ .++ ++|
T Consensus 6 Ga-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a-----~DL~~~~~~~~~~~~~i~~~---~y~----~~~--~aD 70 (307)
T cd05290 6 GA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEA-----LDFHHATALTYSTNTKIRAG---DYD----DCA--DAD 70 (307)
T ss_pred CC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHH-----HHHHhhhccCCCCCEEEEEC---CHH----HhC--CCC
Confidence 55 999999999999887 48999999765532111 111111 1 12333333 333 333 999
Q ss_pred EEEeccCCC
Q 029198 75 VVYDINGRE 83 (197)
Q Consensus 75 ~vi~~a~~~ 83 (197)
+||-+||..
T Consensus 71 ivvitaG~~ 79 (307)
T cd05290 71 IIVITAGPS 79 (307)
T ss_pred EEEECCCCC
Confidence 999999874
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK00257 erythronate-4-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.66 E-value=0.58 Score=37.42 Aligned_cols=27 Identities=26% Similarity=0.341 Sum_probs=24.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGK 29 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~ 29 (197)
|.|.+|+.+++.|...|.+|.+.++..
T Consensus 123 G~G~IG~~va~~l~a~G~~V~~~Dp~~ 149 (381)
T PRK00257 123 GAGHVGGRLVRVLRGLGWKVLVCDPPR 149 (381)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCcc
Confidence 679999999999999999999998743
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.66 E-value=0.26 Score=39.49 Aligned_cols=27 Identities=26% Similarity=0.203 Sum_probs=24.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGK 29 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~ 29 (197)
|.|.+|+.+++.|..-|.+|.+.+|..
T Consensus 206 G~G~IG~~vA~~L~afG~~V~~~d~~~ 232 (386)
T PLN03139 206 GAGRIGRLLLQRLKPFNCNLLYHDRLK 232 (386)
T ss_pred eecHHHHHHHHHHHHCCCEEEEECCCC
Confidence 579999999999999999999998874
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=92.61 E-value=0.56 Score=38.50 Aligned_cols=82 Identities=11% Similarity=-0.021 Sum_probs=51.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.||+.++..|...|.+|++..+++....... ..++... .+.++++ ..|+|+.+.+.
T Consensus 261 G~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-----------~~G~~~~--------~leell~--~ADIVI~atGt 319 (476)
T PTZ00075 261 GYGDVGKGCAQALRGFGARVVVTEIDPICALQAA-----------MEGYQVV--------TLEDVVE--TADIFVTATGN 319 (476)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-----------hcCceec--------cHHHHHh--cCCEEEECCCc
Confidence 5689999999999999999999988755421100 0122221 2445566 88999987653
Q ss_pred CccchHHHHHhCCCCCcEEEEec
Q 029198 83 EADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
...-....++.|+.-..+++++-
T Consensus 320 ~~iI~~e~~~~MKpGAiLINvGr 342 (476)
T PTZ00075 320 KDIITLEHMRRMKNNAIVGNIGH 342 (476)
T ss_pred ccccCHHHHhccCCCcEEEEcCC
Confidence 22122456677774446666654
|
|
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=92.59 E-value=0.71 Score=35.97 Aligned_cols=94 Identities=16% Similarity=0.109 Sum_probs=57.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEee-cCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG-DRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
.|++|.+|..++..+...|.+|+.+++++++.. .+. +.... .++.. +....+.+.+.....++|.++++
T Consensus 172 ~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~-~~~--------~~g~~-~v~~~~~~~~~~~~~~~~~~~~vd~vl~~ 241 (341)
T cd08297 172 SGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLE-LAK--------ELGAD-AFVDFKKSDDVEAVKELTGGGGAHAVVVT 241 (341)
T ss_pred ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHH--------HcCCc-EEEcCCCccHHHHHHHHhcCCCCCEEEEc
Confidence 378888999999999999999999988865421 111 11111 11111 11123445555444579999986
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEec
Q 029198 80 NGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.+.. ......++.++...+++.++.
T Consensus 242 ~~~~-~~~~~~~~~l~~~g~~v~~g~ 266 (341)
T cd08297 242 AVSA-AAYEQALDYLRPGGTLVCVGL 266 (341)
T ss_pred CCch-HHHHHHHHHhhcCCEEEEecC
Confidence 6542 345556666765568887763
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.87 Score=35.74 Aligned_cols=29 Identities=21% Similarity=0.265 Sum_probs=26.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|.+|+.+++.|...|++|++.+|++..
T Consensus 153 G~G~IG~~vA~~L~~~G~~V~~~d~~~~~ 181 (330)
T PRK12480 153 GTGRIGAATAKIYAGFGATITAYDAYPNK 181 (330)
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 67999999999999999999999987643
|
|
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=92.56 E-value=1.3 Score=34.55 Aligned_cols=90 Identities=17% Similarity=0.176 Sum_probs=54.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEe-ecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK-GDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
+|++|.+|..++..+...|.+|++++++. . ...+ .+. ++..+. .+-.+... .......++|.+|++
T Consensus 184 ~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~-~~~~--------~~~--g~~~~~~~~~~~~~~-~~~~~~~~~d~vi~~ 250 (350)
T cd08274 184 TGASGGVGSALVQLAKRRGAIVIAVAGAA-K-EEAV--------RAL--GADTVILRDAPLLAD-AKALGGEPVDVVADV 250 (350)
T ss_pred EcCCcHHHHHHHHHHHhcCCEEEEEeCch-h-hHHH--------Hhc--CCeEEEeCCCccHHH-HHhhCCCCCcEEEec
Confidence 47889999999999999999999888653 2 1111 111 122221 11112222 223333479999999
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEec
Q 029198 80 NGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.+. ......++.++...+++.++.
T Consensus 251 ~g~--~~~~~~~~~l~~~G~~v~~g~ 274 (350)
T cd08274 251 VGG--PLFPDLLRLLRPGGRYVTAGA 274 (350)
T ss_pred CCH--HHHHHHHHHhccCCEEEEecc
Confidence 874 356667777774457777664
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=92.54 E-value=0.44 Score=36.81 Aligned_cols=68 Identities=18% Similarity=0.282 Sum_probs=42.3
Q ss_pred cccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhcc---CceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 3 GTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFS---SKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
|+|++|+.++..|+..| +++++++.+++....... ++.... ....+..+ .|. +.++ ++|+||
T Consensus 5 GaG~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~-----DL~~~~~~~~~~~i~~~--~~~----~~l~--~aDiVI 71 (300)
T cd00300 5 GAGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDAL-----DLSHASAFLATGTIVRG--GDY----ADAA--DADIVV 71 (300)
T ss_pred CCCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHH-----hHHHhccccCCCeEEEC--CCH----HHhC--CCCEEE
Confidence 45899999999999988 799999998765321111 111111 11222211 222 2444 999999
Q ss_pred eccCCC
Q 029198 78 DINGRE 83 (197)
Q Consensus 78 ~~a~~~ 83 (197)
.+++..
T Consensus 72 itag~p 77 (300)
T cd00300 72 ITAGAP 77 (300)
T ss_pred EcCCCC
Confidence 999864
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=92.53 E-value=0.72 Score=35.27 Aligned_cols=93 Identities=22% Similarity=0.200 Sum_probs=56.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
+|++|.+|..++..+...|.+|++++++++... ... +. ++..+ .+..+. +.+.+.....++|.++
T Consensus 146 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~-~~~--------~~--g~~~~-~~~~~~~~~~~~~~~~~~~~~d~~i 213 (325)
T TIGR02824 146 HGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA-ACE--------AL--GADIA-INYREEDFVEVVKAETGGKGVDVIL 213 (325)
T ss_pred EcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH--------Hc--CCcEE-EecCchhHHHHHHHHcCCCCeEEEE
Confidence 478999999999999999999999988765421 110 00 11111 122222 2333333334699999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEecce
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~~ 107 (197)
++++. ......++.+....+++.++...
T Consensus 214 ~~~~~--~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
T TIGR02824 214 DIVGG--SYLNRNIKALALDGRIVQIGFQG 241 (325)
T ss_pred ECCch--HHHHHHHHhhccCcEEEEEecCC
Confidence 98874 23445555566446888776533
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 78.9 bits (194), Expect = 2e-18
Identities = 30/180 (16%), Positives = 61/180 (33%), Gaps = 13/180 (7%)
Query: 2 GGTRFIG-VFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
G I + LL +TL+ R ++ ++G ++
Sbjct: 12 GAAGQIAQXLTATLLTYTDMHITLYGRQ--------LKTRIPPEIIDHERVTVIEGSFQN 63
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC 118
++ ++ +VV+ ++ I+ AL N+ + I S AG+ + +
Sbjct: 64 PGXLEQAV--TNAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEK 121
Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
T P S +G+ +VL +N+T LR ++Y E +
Sbjct: 122 WTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDYELIPEGAQFNDAQVS 181
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 1e-13
Identities = 30/173 (17%), Positives = 52/173 (30%), Gaps = 32/173 (18%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
G + F+G L + G +VT R I + L + K D
Sbjct: 11 GASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEH-------------LKVKKADVSS 57
Query: 61 YDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNL---------EQFIYCSSAGV 108
D V KG D V + D + + + +F+ AG
Sbjct: 58 LDEVCEVC--KGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGS 115
Query: 109 YLKSDLLPHCETDTVD----PKSRHKGKLNTESVLESKGVNWTSLRPVYIYGP 157
+ L ++ V P + G+ +++ K ++W P P
Sbjct: 116 LFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRP 168
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 3e-13
Identities = 36/210 (17%), Positives = 55/210 (26%), Gaps = 38/210 (18%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T +G +R + GH + L R P Q A + + D+
Sbjct: 20 GATGLLGHHAARAIRAAGHDLVLIHR---------PSSQIQRLAYLEPEC--RVAEMLDH 68
Query: 62 DFVKSSLSAKGFDVVY------DINGREADEVEP--------ILDAL--PNLEQFIYCSS 105
++ +L +G D V R E A + + +Y S
Sbjct: 69 AGLERAL--RGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126
Query: 106 AGVY-LKSDLLPHCETDTVDPKSRHKG-----KLNTES-VLE--SKGVNWTSLRPVYIYG 156
A LP E D K K + E G+ P + G
Sbjct: 127 AYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLG 186
Query: 157 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQV 186
L+ P + G V
Sbjct: 187 ELDIGPTTGRVITAIGNGEMTHYVAGQRNV 216
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 3e-13
Identities = 36/207 (17%), Positives = 65/207 (31%), Gaps = 38/207 (18%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T G+ V+ G++VT+ R + + + P A + GD
Sbjct: 10 GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-----RPAHV------VVGDVLQA 58
Query: 62 DFVKSSLSAKGFDVVYDING--READEVEPILDALPNL---------EQFIYCSSAGVYL 110
V ++ G D V + G + + + N+ ++ + C+SA +
Sbjct: 59 ADVDKTV--AGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW 116
Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
+P D R VL G+ + ++ P + P+
Sbjct: 117 DPTKVPPRLQAVTDDHIR------MHKVLRESGLKYVAVMP----PHIGDQPLTG----A 162
Query: 171 LKAGRPIPIPGSGIQVTQLGHVKVRKL 197
P I LGH +R L
Sbjct: 163 YTVTLDGRGPSRVISKHDLGHFMLRCL 189
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 7e-13
Identities = 34/209 (16%), Positives = 61/209 (29%), Gaps = 45/209 (21%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GGT F+G ++ + +G+ + K E+ D
Sbjct: 9 GGTGFLGQYVVESIKNDGNTPIILTRSIGNK-----------AINDYEY------RVSDY 51
Query: 59 KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LEQ--------FIYC 103
D + D V + I + N + +Y
Sbjct: 52 TLEDLIN---QLNDVDAVVHLAA-TRGSQGKISEFHDNEILTQNLYDACYENNISNIVYA 107
Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGP- 157
S+ Y LP E + P + KL E + KG+ +LR ++YG
Sbjct: 108 STISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFN 167
Query: 158 LNYNPVEEWFFHRLKAGRPIPIPGSGIQV 186
N + FF + G + + + +
Sbjct: 168 EKNNYMINRFFRQAFHGEQLTLHANSVAK 196
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 63.8 bits (155), Expect = 8e-13
Identities = 32/171 (18%), Positives = 49/171 (28%), Gaps = 31/171 (18%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T G + GH+VT R I Q I L+ D D
Sbjct: 7 GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKD------------INILQKDIFDL 54
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL---------EQFIYCSSAGV-YLK 111
+VV D G DE E + +L +L + + A +
Sbjct: 55 T----LSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQID 110
Query: 112 SDLLPHCETDTVDPKSRHKGKLNTESVLE-----SKGVNWTSLRPVYIYGP 157
D E+ + + LE +WT + P ++ P
Sbjct: 111 EDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEP 161
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 2e-12
Identities = 41/199 (20%), Positives = 68/199 (34%), Gaps = 33/199 (16%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
G IG ++ LL++ G +V F G+ + L + F ++G
Sbjct: 28 GICGQIGSHIAELLLERGDKVVGIDNFATGR---REHLKDHPNLTF---------VEGSI 75
Query: 59 KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL---------------EQFIYC 103
D+ V + D V D + D L N +F+Y
Sbjct: 76 ADHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYF 135
Query: 104 SSAGVY-LKSDLLPHCETDTVDPKSRHKG--KLNTESVLESKGVNWTSLRPVYIYGPLNY 160
+A Y +K P +P + K E LE G+++ + R + GP N
Sbjct: 136 QTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTFRLANVVGPRNV 195
Query: 161 NPVEEWFFHRLKAGRPIPI 179
+ FF RL G+ +
Sbjct: 196 SGPLPIFFQRLSEGKKCFV 214
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 63.0 bits (153), Expect = 3e-12
Identities = 31/185 (16%), Positives = 61/185 (32%), Gaps = 15/185 (8%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T +IG +++ + GH L R + + + F + I+H G D+
Sbjct: 11 GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH--GSIDDH 68
Query: 62 DFVKSSLSAKGFDVVYD-INGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
+ ++ K DVV + + + I+ A+ + + S G
Sbjct: 69 ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGN------DVDN 120
Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
KS + K +E++G+ +T + G + +
Sbjct: 121 VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAG--YFLRSLAQAGLTAPPRDKVV 178
Query: 179 IPGSG 183
I G G
Sbjct: 179 ILGDG 183
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 4e-12
Identities = 44/222 (19%), Positives = 66/222 (29%), Gaps = 50/222 (22%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
G FIG L L+K +V F G L + S ++GD
Sbjct: 34 GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQR---NLDEVRSLVSEKQWSNFKFIQGDI 90
Query: 59 KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
++ D ++ G D V IN +PI N+
Sbjct: 91 RNLDDCNNAC--AGVDYVLHQAALGSVPRSIN-------DPITSNATNIDGFLNMLIAAR 141
Query: 98 ----EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTS 148
+ F Y +S+ Y LP E P S + K E + G +
Sbjct: 142 DAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIG 201
Query: 149 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQ 185
LR ++G Y V + + G + I G G
Sbjct: 202 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGET 243
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 1e-11
Identities = 40/191 (20%), Positives = 65/191 (34%), Gaps = 33/191 (17%)
Query: 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--------ESDQEFAEFSSKILHL 54
G +G+ L+R L +GH+VT R P+ + ++ +IL
Sbjct: 10 GCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVY 69
Query: 55 KGDRKDYDFVKSSLSA-KGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLK 111
++A + D Y ++ E + L AL L+ + SS GVY +
Sbjct: 70 ------------CVAASEYSDEHYRLSYVEG--LRNTLSALEGAPLQHVFFVSSTGVYGQ 115
Query: 112 SDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
E K K L E++L + T LR IYGP + +
Sbjct: 116 EVEEWLDEDTPPIAKDFSGKRMLEAEALLA--AYSSTILRFSGIYGPGRLRMIR-----Q 168
Query: 171 LKAGRPIPIPG 181
+ P
Sbjct: 169 AQTPEQWPARN 179
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 59.6 bits (144), Expect = 4e-11
Identities = 28/190 (14%), Positives = 59/190 (31%), Gaps = 20/190 (10%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GGT +IG + + GH + R ++ + F + +K+ ++ D+
Sbjct: 11 GGTGYIGKRIVNASISLGHPTYVLFR-PEVVSNIDKVQMLLYFKQLGAKL--IEASLDDH 67
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVE-----PILDA---LPNLEQFIYCSSAGVYLKSD 113
+ +L K DVV +++A N+++F+
Sbjct: 68 QRLVDAL--KQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP---- 121
Query: 114 LLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA 173
E K +E+ + +T + G + + H +
Sbjct: 122 --DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYF-AGSLAQLDGHMMPP 178
Query: 174 GRPIPIPGSG 183
+ I G G
Sbjct: 179 RDKVLIYGDG 188
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 58.7 bits (142), Expect = 5e-11
Identities = 36/201 (17%), Positives = 78/201 (38%), Gaps = 27/201 (13%)
Query: 2 GGTRFIGVFL-SRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
G I + ++L K+ + TLF R A I + P + + GD +
Sbjct: 30 GAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-----------TNSQIIMGDVLN 78
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEP--ILDALP--NLEQFIYCSSAGVYLKSDLLP 116
+ +K ++ +G D+VY E +++ ++ A+ ++++ I+ S G+Y +
Sbjct: 79 HAALKQAM--QGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKF 136
Query: 117 HCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
+ V K +E+ G+ +T LRP + L + ++ R
Sbjct: 137 VEWNNAV-IGEPLKPFRRAADAIEASGLEYTILRPAW----LTDEDIIDYEL----TSRN 187
Query: 177 IPIPGSGIQVTQLGHVKVRKL 197
P G+ + + + +
Sbjct: 188 EPFKGTIVSRKSVAALITDII 208
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 3e-10
Identities = 38/187 (20%), Positives = 69/187 (36%), Gaps = 18/187 (9%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
G T IG + +K G+ R I P ++ + S ++ L+GD D
Sbjct: 9 GPTGAIGRHIVWASIKAGNPTYALVR--KTITAANPETKEELIDNYQSLGVILLEGDIND 66
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVE-PILDALP--NLEQFIYCSSAGVYLKSDLLPH 117
++ + ++ K D+V GR E + I+ A+ + + S G+
Sbjct: 67 HETLVKAI--KQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGL-------DV 117
Query: 118 CETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
D V+P + + K + V+E++GV +T L G +
Sbjct: 118 DRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTG--YFLRNLAQLDATDPPRDK 175
Query: 177 IPIPGSG 183
+ I G G
Sbjct: 176 VVILGDG 182
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 2e-09
Identities = 43/222 (19%), Positives = 69/222 (31%), Gaps = 50/222 (22%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
G FIG L L+K V F+ G L E S+ ++GD
Sbjct: 32 GVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY---NLDEVKTLVSTEQWSRFCFIEGDI 88
Query: 59 KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
+D + + KG D V I +PI N+
Sbjct: 89 RDLTTCEQVM--KGVDHVLHQAALGSVPRSIV-------DPITTNATNITGFLNILHAAK 139
Query: 98 ----EQFIYCSSAGVYLKSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTS 148
+ F Y +S+ Y LP E + +P S ++ ++ + + G
Sbjct: 140 NAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIG 199
Query: 149 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQ 185
LR ++G Y V + + G + I G G
Sbjct: 200 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGET 241
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 9e-09
Identities = 26/168 (15%), Positives = 55/168 (32%), Gaps = 32/168 (19%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T +G L + L +Q+ R K Q +K D
Sbjct: 7 GSTGRVGKSLLKSLSTTDYQIYAGAR-KVEQVPQYNN---------------VKAVHFDV 50
Query: 62 DFVKSSLSA--KGFDVVYDINGREADEVEPI-LDALPNL---------EQFIYCSSAGVY 109
D+ ++ G D + +++G + + L L ++FI S+
Sbjct: 51 DWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS- 109
Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVL-ESKGVNWTSLRPVYIYG 156
L+ + D + + K + L + +++T ++P +
Sbjct: 110 LQPEKWIGAGFDALKD--YYIAKHFADLYLTKETNLDYTIIQPGALTE 155
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 1e-08
Identities = 33/186 (17%), Positives = 68/186 (36%), Gaps = 17/186 (9%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GGT +IG F+ R + H ++ R P + + +EF I ++G+ +++
Sbjct: 11 GGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI--IEGEMEEH 68
Query: 62 DFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDLLPH 117
+ + S L K D+V + I++A+ N+++F+ + LP
Sbjct: 69 EKMVSVL--KQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLP- 125
Query: 118 CETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI 177
+S + K +E+ + +T + + I
Sbjct: 126 ------PFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPH--PNRNDDI 177
Query: 178 PIPGSG 183
I G+G
Sbjct: 178 VIYGTG 183
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 4e-08
Identities = 32/189 (16%), Positives = 68/189 (35%), Gaps = 31/189 (16%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTR---GKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GGT +IG + + +K GH +FTR K + + S + +KG+
Sbjct: 18 GGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ----------SLGAIIVKGEL 67
Query: 59 KDYDFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDL 114
+++ + + K DVV + + + IL+A+ N+++F+ + +
Sbjct: 68 DEHEKLVELM--KKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINA 125
Query: 115 LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
LP ++ + K +E + +T + +
Sbjct: 126 LPPF-------EALIERKRMIRRAIEEANIPYTYVSANCFASYF-----INYLLRPYDPK 173
Query: 175 RPIPIPGSG 183
I + G+G
Sbjct: 174 DEITVYGTG 182
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 7e-08
Identities = 49/213 (23%), Positives = 79/213 (37%), Gaps = 47/213 (22%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GG FIG L LV+ G++V + + G+ + + AE D
Sbjct: 7 GGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR---EFVNPS-----AEL------HVRDL 52
Query: 59 KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
KDY + DVV+ + R + EPI+ N LE
Sbjct: 53 KDYSWGA----GIKGDVVFHFAANPEVRLSTT-EPIVHFNENVVATFNVLEWARQTGVRT 107
Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
++ SS+ VY +D++P E + P S + K E + GV ++R +
Sbjct: 108 VVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANV 167
Query: 155 YGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQV 186
GP + V F +L+ + + G G Q
Sbjct: 168 VGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQR 200
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 8e-08
Identities = 37/213 (17%), Positives = 73/213 (34%), Gaps = 47/213 (22%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GG FIG + L E +++ + + G + + A +K D
Sbjct: 8 GGAGFIGSHVVDKLS-ESNEIVVIDNLSSGNE---EFVNEA-----ARL------VKADL 52
Query: 59 KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
D KG + V+ + + R E P N LE +
Sbjct: 53 AADDIKDY---LKGAEEVWHIAANPDVRIGAE-NPDEIYRNNVLATYRLLEAMRKAGVSR 108
Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
++ S++ VY ++ ++P E P S + KL E+++ + + R +
Sbjct: 109 IVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANV 168
Query: 155 YGP-LNYNPVEEWFFHRLKAGRPIPIPGSGIQV 186
G + + ++ + + I G+G Q
Sbjct: 169 IGRRSTHGVIYDFIMKLKRNPEELEILGNGEQN 201
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 1e-07
Identities = 23/173 (13%), Positives = 42/173 (24%), Gaps = 32/173 (18%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T G + + GH+V R A G + ++
Sbjct: 7 GATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-DRLGATVAT------------LVKEPL 53
Query: 62 DFVKSSLSAKGFDVVYDING---------READEVEPILDAL--PNLEQFIYCSSAGVYL 110
++ L D V D D ++ L + SA + +
Sbjct: 54 VLTEADL--DSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAM 111
Query: 111 KSDLLPHCETDTVDPKSR------HKGKLNTESVLESKGVNWTSLRPVYIYGP 157
P S+ + + + VNW + P +
Sbjct: 112 PGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPS 164
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-07
Identities = 23/171 (13%), Positives = 49/171 (28%), Gaps = 39/171 (22%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G + +L L +GH+ R + +L + + + ++
Sbjct: 28 GANGKVARYLLSELKNKGHEPVAMVRNEEQ-GPELRERGASDI---------VVANLEE- 76
Query: 62 DFVKSSLSA--KGFDVVYDING--READEVEP----------ILDA--LPNLEQFIYCSS 105
S D V G + + +++FI SS
Sbjct: 77 -----DFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131
Query: 106 AGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYG 156
G D P ++ + K + L+ +++T +RP +
Sbjct: 132 VGTV-DPDQGP------MNMRHYLVAKRLADDELKRSSLDYTIVRPGPLSN 175
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 49.0 bits (116), Expect = 2e-07
Identities = 42/230 (18%), Positives = 70/230 (30%), Gaps = 51/230 (22%)
Query: 2 GGTRFIGVFLSRLLVKEGH-----QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
G T IG L+ +L +V R P + I +++
Sbjct: 8 GVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNP------------INYVQC 55
Query: 57 DRKDYDFVKSSLSAKG-----FDVVYDINGREADEVEP-------ILDAL----PNLEQF 100
D D D ++ LS F V + E + E +LDA+ PNL+
Sbjct: 56 DISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHI 115
Query: 101 IYCSSAGVY---------LKSDLLPHCETDTVDPKSRHKGKLNT---ESVLESKGVNWTS 148
+ Y ++S P+ E L E V + +G+ W+
Sbjct: 116 SLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSV 175
Query: 149 LRPVYIYGPLNYNPVEEWFFHRLKA------GRPIPIPGSGIQVTQLGHV 192
RP I+G Y+ + + A G+ + G
Sbjct: 176 HRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDC 225
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 5e-07
Identities = 31/190 (16%), Positives = 62/190 (32%), Gaps = 25/190 (13%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T FIG F++ + + R + + + + I + G +
Sbjct: 17 GATGFIGQFVATASLDAHRPTYILARPGPRSPS--KAKIFKALEDKGAII--VYGLINEQ 72
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVE-PILDALPNLEQFIYCSSAGV---YLKSDLLPH 117
+ ++ L D+V G E+ + ++ A + G +L S+
Sbjct: 73 EAMEKILKEHEIDIVVSTVGGESILDQIALVKA---------MKAVGTIKRFLPSEF--G 121
Query: 118 CETDTVDPKSR----HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA 173
+ + DP ++ K ++E G+ +T + I YN + L
Sbjct: 122 HDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIH--PSEVLPP 179
Query: 174 GRPIPIPGSG 183
I G G
Sbjct: 180 TDFFQIYGDG 189
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 8e-07
Identities = 29/216 (13%), Positives = 63/216 (29%), Gaps = 48/216 (22%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G + IG L L ++ + + IA + +F + D +
Sbjct: 6 GSSGQIGTELVPYLAEKYGKKNV-------IASDIVQRDTGGI-KF------ITLDVSNR 51
Query: 62 DFVKSSLSAKGFDVVY------------------DINGREADEVEPILDAL--PNLEQFI 101
D + ++ D ++ +N + IL+A +E+ +
Sbjct: 52 DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVN---MNGTYNILEAAKQHRVEKVV 108
Query: 102 YCSSAGVYLKSDLLPHCETDTV-DPKSR-HKGKLNTESVLES----KGVNWTSLRPVYIY 155
S+ GV+ + T+ P++ K+ E + + G++ SLR I
Sbjct: 109 IPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGII 168
Query: 156 GP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQV 186
F+ + +
Sbjct: 169 SYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRA 204
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 3e-06
Identities = 30/216 (13%), Positives = 60/216 (27%), Gaps = 51/216 (23%)
Query: 2 GGTRFIGVFLSRLLVKE-GHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
G IG L++ L K G + + + + P +
Sbjct: 9 GACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGP---------------FEVVN 53
Query: 58 RKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNL---------------EQ 99
D++ ++ + +Y + A E P N+ ++
Sbjct: 54 ALDFNQIEHLVEVHKITDIYLMAALLSATA-EKNPAFAWDLNMNSLFHVLNLAKAKKIKK 112
Query: 100 FIYCSSAGVYLKSDLLPHCETDTVD-PKSRHKG--KLNTESVLESK----GVNWTSLRPV 152
+ SS V+ + + T+ P + + G K E E GV+ S+R
Sbjct: 113 IFWPSSIAVFGPTTPKENTPQYTIMEPSTVY-GISKQAGERWCEYYHNIYGVDVRSIRYP 171
Query: 153 YIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSG 183
+ F++ A + S
Sbjct: 172 GLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSS 207
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 7e-06
Identities = 38/193 (19%), Positives = 59/193 (30%), Gaps = 28/193 (14%)
Query: 6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
+ LSR L +G ++ +R + + ++ L G+ D V
Sbjct: 15 YTARVLSRALAPQGWRIIGTSRNP---------DQMEAIRASGAEPLLWPGEEPSLDGVT 65
Query: 66 SSLSA----KGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
L + G D V G + I Y S+ VY D ET
Sbjct: 66 HLLISTAPDSGGDPVLAALGDQ------IAARAAQFRWVGYLSTTAVYGDHDGAWVDETT 119
Query: 122 TVDPKS-RHKGKLN-TESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 179
+ P + R + ++ + + R IYGP P +L G I
Sbjct: 120 PLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGP-GRGPFS-----KLGKGGIRRI 173
Query: 180 PGSGIQVTQLGHV 192
QV HV
Sbjct: 174 IK-PGQVFSRIHV 185
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-05
Identities = 30/212 (14%), Positives = 51/212 (24%), Gaps = 46/212 (21%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G +G + L H+V L + + + E + D D
Sbjct: 9 GAAGGVGSAIRPHLGTLAHEVRLSDI--------VDLGAAEAHEEI------VACDLADA 54
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVE-PILDALPN--------LE--------QFIYCS 104
V + K D + + VE P D L E + ++ S
Sbjct: 55 QAVHDLV--KDCDGIIHL---GGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFAS 109
Query: 105 SAGVY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGP- 157
S P S + K E + + ++R +
Sbjct: 110 SNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKP 169
Query: 158 LNYNPVEEW---FFHRLKAGRPIPIPGSGIQV 186
+ + W R P G V
Sbjct: 170 KDARMMATWLSVDDFMRLMKRAFVAPKLGCTV 201
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 1e-05
Identities = 27/163 (16%), Positives = 48/163 (29%), Gaps = 33/163 (20%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
G T G L R+ GH V K IA++L + +G +
Sbjct: 12 GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLF---------QGPLLN 62
Query: 61 YDFVKSSLSA--KGFDVVYDI-NGREADEVE---PILDA---LPNLEQFIYCSSAGVYLK 111
+ +G + + + DE+ + DA ++ +IY S
Sbjct: 63 ---NVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSS------- 112
Query: 112 SDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVY 153
+P P K E+ + G+ T +
Sbjct: 113 ---MPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGI 152
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-05
Identities = 37/195 (18%), Positives = 68/195 (34%), Gaps = 35/195 (17%)
Query: 2 GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
G + G L + ++++G +VTL R K ++ +QE +F K+ +
Sbjct: 25 GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFE-KLDDYASAFQ 83
Query: 60 DYDFV-------KSSLSAKGFDVV-YDINGREADEVEPILDALPNLEQFIYCSSAGVYLK 111
+D + A+GF V D + A+ + + F SS G
Sbjct: 84 GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-----GCKHFNLLSSKGADKS 138
Query: 112 SDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR- 170
S+ L + KG++ V E K ++ RP + + EW +
Sbjct: 139 SNFLY----------LQVKGEVE-AKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF 187
Query: 171 -------LKAGRPIP 178
+G +P
Sbjct: 188 FGSLPDSWASGHSVP 202
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 4e-05
Identities = 39/200 (19%), Positives = 65/200 (32%), Gaps = 37/200 (18%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GG +G L + +GH++ + F GK + LP + E G
Sbjct: 27 GGAGCLGSNLIEHWLPQGHEILVIDNFATGKR---EVLPPVAGLSVIE---------GSV 74
Query: 59 KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LE--------QFIYC 103
D ++ + + V D + DA N + + +
Sbjct: 75 TDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNF 134
Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGP---LN 159
+A Y + +P P + + K E+ L V SLR + GP +
Sbjct: 135 QTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIG 194
Query: 160 YNPVEEWFFHRLKAGRPIPI 179
P F+ RLKAG+
Sbjct: 195 PIPT---FYKRLKAGQKCFC 211
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 1e-04
Identities = 39/238 (16%), Positives = 67/238 (28%), Gaps = 72/238 (30%)
Query: 2 GGTRFIGVFLSRLLVKEG-HQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
GG F+G L + L++ G +QV L + K + D F +
Sbjct: 39 GGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP-------DHPAVRF------SET 85
Query: 57 DRKDYDFVKSSLSAKGFDVVYDINGREADEV-------EPILDALPN-------LEQ--- 99
D + S +D V+ A +P+ D N E+
Sbjct: 86 SITDDALLASLQ--DEYDYVF----HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKH 139
Query: 100 ------FIYCSSAGVYLKSDLLPHCETDTVDPKSRHK-------GKLNTESVL----ESK 142
+Y ++ + T+ D S H K+ E +
Sbjct: 140 FKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH 199
Query: 143 GVNWTSLRPVYIYGPLNYNPVEEW--------------FFHRLKAGRPIPIPGSGIQV 186
+ R +YGP W F ++ G P+P+ G+
Sbjct: 200 QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVAT 257
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 2e-04
Identities = 26/191 (13%), Positives = 50/191 (26%), Gaps = 39/191 (20%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G +G + L + L P + E ++ D D
Sbjct: 10 GAAGQLGRVMRERLAPMAEILRLADLS--------PLDPAGPNEEC------VQCDLADA 55
Query: 62 DFVKSSLSAKGFDVVY-----DINGREADEVEP-------ILDA--LPNLEQFIYCSSAG 107
+ V + + G D + + ++ + +A + ++ SS
Sbjct: 56 NAVNAMV--AGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNH 113
Query: 108 VY-LKSDLLPHCETDTVDPKSRHKG--KLNTESVL----ESKGVNWTSLRPVYIYG-PLN 159
P + G K E++ + G +R P N
Sbjct: 114 TIGYYPQTERLGPDVPARPDGLY-GVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNN 172
Query: 160 YNPVEEWFFHR 170
Y + WF H
Sbjct: 173 YRMLSTWFSHD 183
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 2e-04
Identities = 41/222 (18%), Positives = 68/222 (30%), Gaps = 52/222 (23%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
G FI ++R L EGH V + + + + EF D +
Sbjct: 36 GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMF---CDEF---------HLVDLRV 83
Query: 61 YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
+ +G D V+ D+ G + + N ++F
Sbjct: 84 MENCLKVT--EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFF 141
Query: 102 YCSSAGVYLKSDLLPHCETDT-------VDPKSRH-KGKLNTESVL----ESKGVNWTSL 149
Y SSA +Y + L +P+ KL TE + + G+
Sbjct: 142 YASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIG 201
Query: 150 RPVYIYGP-LNYNPVEEW----FFHR-LKAGRPIPIPGSGIQ 185
R IYGP + E F + + + G G+Q
Sbjct: 202 RFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQ 243
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 3e-04
Identities = 37/219 (16%), Positives = 68/219 (31%), Gaps = 45/219 (20%)
Query: 2 GGTRFIGVFLSRLLVKEG--HQVTL---FTRGKAPIAQQLPGESD-QEFAEFSSKILHLK 55
GG F+G L+ + +V + F + + F +++
Sbjct: 17 GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVI--A 74
Query: 56 GDRKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE------------- 98
D + ++ L FD ++ + + L N +
Sbjct: 75 ADINNPLDLRR-LEKLHFDYLFHQAAVSDTTMLN---QELVMKTNYQAFLNLLEIARSKK 130
Query: 99 -QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG--KLNTESVL--ESKGVNWTSLRPVY 153
+ IY SSAGVY + P+ P++ + G KL + + S LR Y
Sbjct: 131 AKVIYASSAGVYGNTK-APNVVGKNESPENVY-GFSKLCMDEFVLSHSNDNVQVGLR--Y 186
Query: 154 --IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQ 185
+YGP + A + + + G Q
Sbjct: 187 FNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQ 225
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516 | Back alignment and structure |
|---|
Score = 39.3 bits (92), Expect = 4e-04
Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL--PGESDQEFAEFSSKILHLKG 56
G +G L+ L GH+V R + ++ P + + + ++HL G
Sbjct: 154 GSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAG 210
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 38.7 bits (90), Expect = 5e-04
Identities = 23/190 (12%), Positives = 43/190 (22%), Gaps = 52/190 (27%)
Query: 2 GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
G + G + + L + R A +++ GE+D GD
Sbjct: 11 GASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQGKEKIGGEADV-----------FIGDIT 58
Query: 60 DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALP------------------------ 95
D D + + +G D + +
Sbjct: 59 DADSINPAF--QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 116
Query: 96 -------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTS 148
++ + S G L + K E L G +T
Sbjct: 117 IDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNI-----LVWKRKAEQYLADSGTPYTI 171
Query: 149 LRPVYIYGPL 158
+R +
Sbjct: 172 IRAGGLLDKE 181
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 38.7 bits (91), Expect = 6e-04
Identities = 51/224 (22%), Positives = 80/224 (35%), Gaps = 55/224 (24%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GG FIG + L+ G +V + GK + +P F + D
Sbjct: 7 GGAGFIGSHIVEDLLARGLEVAVLDNLATGK---RENVPKG-----VPF------FRVDL 52
Query: 59 KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
+D + V+ + V + + + E +P+LD N LE +
Sbjct: 53 RDKEGVERAFREFRPTHVSHQAAQASVKVSVE-DPVLDFEVNLLGGLNLLEACRQYGVEK 111
Query: 100 FIYCSSAG-VY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPV 152
++ S+ G +Y + ET PKS + K E L G+ W SLR
Sbjct: 112 LVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYG 171
Query: 153 YIYGPLNYNPVEE-----WFFHRLKAGRPIPI-----PGSGIQV 186
+YGP +P E F R+ G P+ + PG V
Sbjct: 172 NVYGP-RQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCV 214
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 38.6 bits (90), Expect = 6e-04
Identities = 43/263 (16%), Positives = 71/263 (26%), Gaps = 86/263 (32%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQL----PGESDQEFAEFSSKILH- 53
GG + G + L K+ ++V + R L P S + +
Sbjct: 18 GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGK 77
Query: 54 ----LKGDRKDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPN--- 96
GD D++F+ S + D V Y + R + N
Sbjct: 78 SIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRS----RAVYTQHNNVIG 133
Query: 97 ----LE---------QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL---- 139
L + + G Y P+ + + H G+ +T
Sbjct: 134 TLNVLFAIKEFGEECHLVKLGTMGEYGT----PNIDIEEGYITITHNGRTDTLPYPKQAS 189
Query: 140 ----ESK--------------GVNWTSLRPVYIYGP--------------LNYNPVEEW- 166
SK G+ T L +YG L+Y+ V
Sbjct: 190 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 249
Query: 167 ---FFHRLKAGRPIPIPGSGIQV 186
F + G P+ + G G Q
Sbjct: 250 LNRFCVQAAVGHPLTVYGKGGQT 272
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 38.3 bits (90), Expect = 8e-04
Identities = 33/217 (15%), Positives = 55/217 (25%), Gaps = 48/217 (22%)
Query: 2 GGTRFIGVFLSRLLVKEG-HQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
GG FIG + + L +G + + G + + K D
Sbjct: 6 GGAGFIGSNIVKALNDKGITDILVVDNLKDG----------TKFVNLVDLNIADYMDKED 55
Query: 58 RKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------Q 99
+ ++ + E D + ++D N +
Sbjct: 56 FLIQIMAGEEF--GDVEAIFHEGACSSTTEWDG-KYMMDN--NYQYSKELLHYCLEREIP 110
Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPK-----SRHKGKLNTESVLESKGVNWTSLRPVYI 154
F+Y SSA Y + P S+ +L R +
Sbjct: 111 FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNV 170
Query: 155 YGP-----LNYNPVEEWFFHRLKAG-RPIPIPGSGIQ 185
YGP + V +L G P GS
Sbjct: 171 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENF 207
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 38.1 bits (89), Expect = 9e-04
Identities = 32/227 (14%), Positives = 57/227 (25%), Gaps = 63/227 (27%)
Query: 2 GGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL 54
G +G L++ LVK+G + TL + G +
Sbjct: 21 GAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGA-----VDA------R 69
Query: 55 KGDRKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNLE------------- 98
D + L DV++ I EA E++ NL+
Sbjct: 70 AADLSAPGEAEK-LVEARPDVIFHLAAIVSGEA-ELDFDKGYRINLDGTRYLFDAIRIAN 127
Query: 99 -------QFIYCSSAGVYLKSDLLPHCETDTVDPKS---RHKGKLNTESVLES----KGV 144
+ ++ SS V+ P + P + K E +L
Sbjct: 128 GKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQ--KAICELLLSDYSRRGFF 185
Query: 145 NWTSLRPVYIYGPL--------NYNPVEEWFFHRLKAGRPIPIPGSG 183
+ +R I + G+ +P
Sbjct: 186 DGIGIRLPTICIRPGKPNAAASGFFSN---ILREPLVGQEAVLPVPE 229
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 197 | |||
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.97 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.97 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.97 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.97 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.97 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.96 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.96 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.96 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.96 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.96 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.96 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.96 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.96 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.96 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.96 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.96 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.96 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.96 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.96 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.96 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.96 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.95 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.95 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.95 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.95 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.95 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.95 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.95 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.95 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.95 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.95 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.95 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.95 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.95 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.95 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.95 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.95 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.95 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.95 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.94 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.94 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.94 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.94 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.94 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.94 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.94 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.94 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.94 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.94 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.93 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.93 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.93 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.92 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.92 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.92 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.91 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.91 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.91 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.91 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.9 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.9 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.9 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.9 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.9 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.9 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.9 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.9 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.89 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.89 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.89 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.89 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.89 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.89 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.88 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.88 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.88 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.88 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.87 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.87 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.87 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.86 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.86 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.86 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.85 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.85 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.85 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.84 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.84 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.75 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.75 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.74 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.73 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.73 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.72 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.72 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.72 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.72 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.72 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.71 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.71 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.71 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.71 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.71 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.71 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.71 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.7 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.7 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.7 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.7 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.69 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.69 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.69 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.69 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.69 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.69 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.69 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.69 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.68 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.68 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.68 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.68 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.68 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.68 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.68 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.67 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.67 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.67 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.67 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.67 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.67 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.67 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.67 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.67 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.67 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.67 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.67 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.67 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.67 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.67 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.66 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.66 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.66 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.66 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.66 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.66 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.66 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.66 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.66 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.66 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.66 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.66 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.66 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.66 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.66 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.66 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.65 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.65 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.65 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.65 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.65 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.65 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.65 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.65 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.65 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.65 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.65 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.65 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.65 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.65 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.65 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.65 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.65 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.65 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.64 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.64 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.64 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.64 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.64 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.64 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.64 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.64 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.64 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.64 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.64 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.64 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.64 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.64 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.63 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.63 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.63 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.63 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.63 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.63 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.63 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.63 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.63 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.63 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.63 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.63 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.62 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.62 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.62 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.62 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.62 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.62 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.62 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.62 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.62 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.62 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.62 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.61 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.61 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.61 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.61 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.61 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.61 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.61 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.61 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.61 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.61 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.61 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.61 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.6 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.6 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.6 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.6 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.6 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.6 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.6 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.6 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.6 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.6 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.59 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.59 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.59 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.59 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.59 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.59 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.59 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.59 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.59 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.58 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.58 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.58 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.58 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.58 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.58 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.57 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.57 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.57 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.57 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.57 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.57 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.57 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.57 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.57 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.57 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.56 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.56 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.56 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.55 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.55 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.55 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.55 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.55 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.54 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.54 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.53 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.53 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.52 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.52 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.52 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.52 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.51 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.51 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.51 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.51 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.49 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.49 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.48 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.48 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.48 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.48 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.47 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.47 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.47 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.46 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.46 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.45 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.45 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.44 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.44 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.43 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.42 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.39 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.38 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.36 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.3 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.14 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.12 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.11 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.06 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.95 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.94 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.92 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.92 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.91 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.86 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.85 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.82 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.8 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.73 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.7 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.62 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.54 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.42 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.35 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.23 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.23 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.22 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.14 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.07 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.05 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.97 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.88 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.88 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.86 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.84 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.77 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.74 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.73 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.7 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.66 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.66 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.65 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.61 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.58 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 97.57 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.56 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.51 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.35 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.33 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.3 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.29 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.27 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.27 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.26 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.23 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 97.18 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.17 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.15 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.12 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.09 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.04 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.02 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 96.99 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 96.96 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 96.85 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 96.75 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 96.72 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.7 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 96.7 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 96.69 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 96.65 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 96.59 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 96.57 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 96.53 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 96.51 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 96.5 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 96.49 | |
| 4a7p_A | 446 | UDP-glucose dehydrogenase; oxidoreductase, carbohy | 96.43 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.36 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 96.35 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 96.35 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.34 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 96.2 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 96.13 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 96.02 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 96.02 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 96.0 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 95.96 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 95.94 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 95.92 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 95.89 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 95.76 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 95.72 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 95.67 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 95.66 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 95.64 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 95.64 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 95.62 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 95.6 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 95.6 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 95.57 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 95.57 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 95.55 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 95.54 | |
| 2cuk_A | 311 | Glycerate dehydrogenase/glyoxylate reductase; stru | 95.48 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 95.43 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 95.41 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 95.36 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 95.35 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 95.35 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 95.34 | |
| 1qp8_A | 303 | Formate dehydrogenase; oxidoreductase; HET: NDP; 2 | 95.33 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 95.29 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 95.24 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 95.24 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 95.22 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 95.21 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 95.2 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 95.18 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 95.13 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 95.13 | |
| 2yq5_A | 343 | D-isomer specific 2-hydroxyacid dehydrogenase; oxi | 95.13 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 95.12 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 95.09 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 95.05 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 95.04 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 95.01 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 94.96 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 94.94 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 94.91 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 94.91 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 94.91 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 94.91 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 94.9 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 94.86 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 94.85 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 94.84 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 94.83 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 94.81 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 94.8 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 94.79 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 94.78 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 94.77 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 94.72 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 94.71 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 94.71 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 94.69 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 94.65 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 94.65 | |
| 3ba1_A | 333 | HPPR, hydroxyphenylpyruvate reductase; two domain | 94.65 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 94.54 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 94.5 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 94.5 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 94.47 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 94.43 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 94.42 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 94.38 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 94.36 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 94.36 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 94.31 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 94.3 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 94.3 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 94.3 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 94.26 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 94.25 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 94.25 | |
| 2pi1_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 94.25 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 94.24 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 94.23 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 94.19 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 94.17 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 94.12 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 94.11 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 94.09 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 94.08 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 94.07 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 94.07 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 94.04 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 94.04 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 94.04 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 94.03 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 94.02 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 93.97 | |
| 1xdw_A | 331 | NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas | 93.97 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 93.9 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 93.83 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 93.78 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 93.73 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 93.68 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 93.64 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 93.58 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 93.54 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 93.53 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 93.48 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 93.48 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 93.44 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 93.42 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 93.35 | |
| 4ffl_A | 363 | PYLC; amino acid, biosynthesis of pyrrolysine, iso | 93.18 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 93.15 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 93.14 | |
| 3oet_A | 381 | Erythronate-4-phosphate dehydrogenase; structural | 93.1 | |
| 1dxy_A | 333 | D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc | 93.09 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 93.08 | |
| 2dwc_A | 433 | PH0318, 433AA long hypothetical phosphoribosylglyc | 93.05 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 93.03 |
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=207.09 Aligned_cols=186 Identities=22% Similarity=0.240 Sum_probs=156.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-----ccCceEEEeecCCCHHHHHhhhhccCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-----FSSKILHLKGDRKDYDFVKSSLSAKGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~l~~~~~~~~~d~ 75 (197)
||||||+|++|+++|+++|++|++++|+.......+. .+.. ...+++++.+|+.|++++.++++ ++|+
T Consensus 31 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~ 103 (351)
T 3ruf_A 31 TGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLD-----EVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--GVDH 103 (351)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHH-----HHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--TCSE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhh-----hhhhccccccCCceEEEEccCCCHHHHHHHhc--CCCE
Confidence 7999999999999999999999999998664221110 0000 01579999999999999999999 9999
Q ss_pred EEeccCCC----------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHH
Q 029198 76 VYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE 136 (197)
Q Consensus 76 vi~~a~~~----------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e 136 (197)
|||+|+.. ..++.+++++++ ++++||++||..+|+.....+++|+++..|.+.| .+|..+|
T Consensus 104 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E 183 (351)
T 3ruf_A 104 VLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNE 183 (351)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred EEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHH
Confidence 99999863 234678999988 7889999999999998888899999999998888 9999999
Q ss_pred HHHh----hcCCcEEEEccceeeCCCCCC-----ChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 137 SVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 137 ~~~~----~~~~~~~i~r~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+++ +.+++++++||+++|||+... .++..++..+.+++++.+++++++.++|+||+
T Consensus 184 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~ 249 (351)
T 3ruf_A 184 IYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYID 249 (351)
T ss_dssp HHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHH
T ss_pred HHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHH
Confidence 9875 469999999999999997432 56788899999999999999999999998875
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-31 Score=201.35 Aligned_cols=176 Identities=20% Similarity=0.295 Sum_probs=152.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++++++|+++|++|++++|++.. .. + .+++++.+|+. .+++.++++ ++|+|||+|
T Consensus 8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~-~------------~~~~~~~~Dl~-~~~~~~~~~--~~d~Vih~a 70 (311)
T 3m2p_A 8 TGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KA-I------------NDYEYRVSDYT-LEDLINQLN--DVDAVVHLA 70 (311)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------CCEEEECCCC-HHHHHHHTT--TCSEEEECC
T ss_pred ECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-cc-C------------CceEEEEcccc-HHHHHHhhc--CCCEEEEcc
Confidence 7999999999999999999999999998333 11 1 27899999999 999999998 999999999
Q ss_pred CCCc------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhh----
Q 029198 81 GREA------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES---- 141 (197)
Q Consensus 81 ~~~~------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~---- 141 (197)
+... .++.+++++++ ++++||++||..+|+.....+++|+++..|.+.| .+|..+|.++++
T Consensus 71 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~ 150 (311)
T 3m2p_A 71 ATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK 150 (311)
T ss_dssp CCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 8642 24688999988 7889999999999998877889999999998888 999999998754
Q ss_pred cCCcEEEEccceeeCCCCCC-ChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 142 KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 142 ~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+++++++||+++|||+... .++..++..+.+++++.+++++++.++|+|++
T Consensus 151 ~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~ 203 (311)
T 3m2p_A 151 KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAK 203 (311)
T ss_dssp SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHH
T ss_pred cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHH
Confidence 79999999999999997543 67888999999999999999999999998764
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-31 Score=206.49 Aligned_cols=180 Identities=19% Similarity=0.270 Sum_probs=152.6
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCC-CHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~l~~~~~~~~~d~vi~ 78 (197)
||||||+|++|+++|+++ |++|++++|+++....... ..+++++.+|+. |.+.+.++++ ++|+|||
T Consensus 30 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~~~~Dl~~d~~~~~~~~~--~~d~Vih 97 (372)
T 3slg_A 30 LGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK----------HERMHFFEGDITINKEWVEYHVK--KCDVILP 97 (372)
T ss_dssp ESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG----------STTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred ECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc----------CCCeEEEeCccCCCHHHHHHHhc--cCCEEEE
Confidence 799999999999999998 9999999998765332211 257999999999 9999999998 8999999
Q ss_pred ccCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCC-------CCCCcc-hhh
Q 029198 79 INGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK 132 (197)
Q Consensus 79 ~a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~-------~~~~~~-~~k 132 (197)
+|+... .++.+++++++ + ++||++||..+||.....++.|++.+ .|.+.| .+|
T Consensus 98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK 176 (372)
T 3slg_A 98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSK 176 (372)
T ss_dssp CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHH
Confidence 998642 44678999988 7 99999999999998777788887755 455567 999
Q ss_pred hhHHHHHhhc---CCcEEEEccceeeCCCCC---------CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 133 LNTESVLESK---GVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 133 ~~~e~~~~~~---~~~~~i~r~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
..+|.++++. +++++++||+++|||+.. ..++..++..+.+++++.+++++++.++|+||+
T Consensus 177 ~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 249 (372)
T 3slg_A 177 QLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVD 249 (372)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHH
T ss_pred HHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHH
Confidence 9999998765 999999999999999743 336788889999999999999899999998764
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=199.33 Aligned_cols=187 Identities=16% Similarity=0.249 Sum_probs=154.7
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCcc-CCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
||||||+|++|+++|+++| ++|++++|...... ..+.. ....++++++.+|+.|++++.++++..++|+||
T Consensus 30 tGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 103 (346)
T 4egb_A 30 TGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKS------IQDHPNYYFVKGEIQNGELLEHVIKERDVQVIV 103 (346)
T ss_dssp ETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTT------TTTCTTEEEEECCTTCHHHHHHHHHHHTCCEEE
T ss_pred ECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhh------hccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEE
Confidence 7999999999999999999 78888888753321 11110 111257999999999999999999855699999
Q ss_pred eccCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccC-CCCCCCCCCCCCCCCcc-hhhhhHHH
Q 029198 78 DINGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTES 137 (197)
Q Consensus 78 ~~a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~-~~~~~~e~~~~~~~~~~-~~k~~~e~ 137 (197)
|+|+... .++.+++++++ ++++||++||..+|+.. ...+++|+++..|.+.| .+|..+|.
T Consensus 104 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~ 183 (346)
T 4egb_A 104 NFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADM 183 (346)
T ss_dssp ECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred ECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHH
Confidence 9998642 23688999988 78899999999999976 45689999999898888 99999999
Q ss_pred HHhh----cCCcEEEEccceeeCCCCC-CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 138 VLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 138 ~~~~----~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+++. .+++++++||+++|||+.. ..++..++..+..++++.+++++++.++|+|++
T Consensus 184 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 244 (346)
T 4egb_A 184 IALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVT 244 (346)
T ss_dssp HHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHH
T ss_pred HHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHH
Confidence 8754 6999999999999999753 467788899999999999989999999998875
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=198.44 Aligned_cols=178 Identities=24% Similarity=0.309 Sum_probs=146.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++++++|+++|++|++++|.+....... ..+++++.+|+.|.+ +.++++ . |+|||+|
T Consensus 6 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~-~~~~~~--~-d~vih~A 70 (312)
T 3ko8_A 6 TGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----------NPSAELHVRDLKDYS-WGAGIK--G-DVVFHFA 70 (312)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----------CTTSEEECCCTTSTT-TTTTCC--C-SEEEECC
T ss_pred ECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----------CCCceEEECccccHH-HHhhcC--C-CEEEECC
Confidence 799999999999999999999999999876533222 257899999999999 888887 4 9999999
Q ss_pred CCC----------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhh
Q 029198 81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~ 141 (197)
+.. ..++.+++++++ ++++||++||..+|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~ 150 (312)
T 3ko8_A 71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCAT 150 (312)
T ss_dssp SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence 853 224678888888 8889999999999998887889999988888888 999999997743
Q ss_pred ----cCCcEEEEccceeeCCCCCCChHHHHHHHHHcC-CCcccCCCCceeEEEEEEE
Q 029198 142 ----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 142 ----~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~i~v~ 193 (197)
.+++++++||+++|||+....++..++..+..+ .++.+++++++.++|+|++
T Consensus 151 ~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 207 (312)
T 3ko8_A 151 YARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVR 207 (312)
T ss_dssp HHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHH
T ss_pred HHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHH
Confidence 599999999999999986667777778777766 5667788999999998864
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=196.60 Aligned_cols=189 Identities=17% Similarity=0.182 Sum_probs=151.1
Q ss_pred CCcccchHHHHHHHHHH--CCCeEEEEecCCCCccC--CCCCCCchhhhhccCceEEEeecCCCHHHHHhh-hhccCccE
Q 029198 1 MGGTRFIGVFLSRLLVK--EGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~--~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~~~d~ 75 (197)
||||||||++++++|++ .|++|++++|+...... ...............++.++.+|+.|++++.++ .. ++|+
T Consensus 16 TGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~D~ 93 (362)
T 3sxp_A 16 TGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL--HFDY 93 (362)
T ss_dssp ETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS--CCSE
T ss_pred ECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc--CCCE
Confidence 79999999999999999 89999999997652110 000000011111134679999999999999998 55 9999
Q ss_pred EEeccCCCc--------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHH
Q 029198 76 VYDINGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV 138 (197)
Q Consensus 76 vi~~a~~~~--------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~ 138 (197)
|||+|+... .++.+++++++ +.+ ||++||..+||.... +++|+++..|.+.| .+|..+|.+
T Consensus 94 vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~E~~ 171 (362)
T 3sxp_A 94 LFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENVYGFSKLCMDEF 171 (362)
T ss_dssp EEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred EEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCCChhHHHHHHHHHH
Confidence 999999642 34678899888 555 999999999998766 89999999998888 999999999
Q ss_pred HhhcC--CcEEEEccceeeCCCCCC-----ChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 139 LESKG--VNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 139 ~~~~~--~~~~i~r~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
++... ++++++||+++|||+... .++..++..+..++++.+++++++.++|+|++
T Consensus 172 ~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 233 (362)
T 3sxp_A 172 VLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIE 233 (362)
T ss_dssp HHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHH
T ss_pred HHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHH
Confidence 87654 899999999999997532 66788889999999988889999999998764
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-29 Score=193.81 Aligned_cols=190 Identities=21% Similarity=0.227 Sum_probs=151.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|+++|++|++++|++......+... ...+.. ...+++++.+|+.|.+++.++++ ++|+|||+
T Consensus 33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~ 109 (352)
T 1sb8_A 33 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV-RSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQ 109 (352)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHH-HHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEEC
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHH-hhhcccccCCceEEEECCCCCHHHHHHHhc--CCCEEEEC
Confidence 799999999999999999999999999764311100000 000000 02578999999999999999998 99999999
Q ss_pred cCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh
Q 029198 80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE 140 (197)
Q Consensus 80 a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~ 140 (197)
|+... .++.+++++++ ++++||++||..+|+.....+++|+++..|.+.| .+|..+|.+++
T Consensus 110 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~ 189 (352)
T 1sb8_A 110 AALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYAD 189 (352)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHH
T ss_pred CcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence 98642 23677888887 7889999999999998777788999888888888 99999999874
Q ss_pred ----hcCCcEEEEccceeeCCCCCC-----ChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 141 ----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 141 ----~~~~~~~i~r~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+.+++++++||+++|||.... .++..++..+.+++++.+++++++.++|+|++
T Consensus 190 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~ 251 (352)
T 1sb8_A 190 VFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIE 251 (352)
T ss_dssp HHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHH
T ss_pred HHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHH
Confidence 358999999999999997432 45677788888898888888899999998764
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-30 Score=198.80 Aligned_cols=174 Identities=20% Similarity=0.268 Sum_probs=150.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|+++|++|++++|++.. .+++++.+|+.|.+++.++++ ++|+|||+|
T Consensus 25 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A 85 (347)
T 4id9_A 25 TGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------TGGEEVVGSLEDGQALSDAIM--GVSAVLHLG 85 (347)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------SCCSEEESCTTCHHHHHHHHT--TCSEEEECC
T ss_pred ECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------CCccEEecCcCCHHHHHHHHh--CCCEEEECC
Confidence 7999999999999999999999999998654 367889999999999999999 999999999
Q ss_pred CCCc--------------cchHHHHHhCC--CCCcEEEEecceeccc--CCCCCCCCCCCCCCCCcc-hhhhhHHHHHh-
Q 029198 81 GREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLK--SDLLPHCETDTVDPKSRH-KGKLNTESVLE- 140 (197)
Q Consensus 81 ~~~~--------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~--~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~- 140 (197)
+... .++.+++++++ ++++||++||..+||. ....+++|+++..|.+.| .+|..+|.+++
T Consensus 86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~ 165 (347)
T 4id9_A 86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRF 165 (347)
T ss_dssp CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred cccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHH
Confidence 8642 24678999988 7889999999999997 566789999988888888 99999999875
Q ss_pred ---hcCCcEEEEccceee-------------CCCCC------------CChHHHHHHHHHcCCCcccCCCCceeEEE---
Q 029198 141 ---SKGVNWTSLRPVYIY-------------GPLNY------------NPVEEWFFHRLKAGRPIPIPGSGIQVTQL--- 189 (197)
Q Consensus 141 ---~~~~~~~i~r~~~i~-------------g~~~~------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--- 189 (197)
+.+++++++||+++| ||+.. ..++..++..+..++++.+++++++.++|
T Consensus 166 ~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 245 (347)
T 4id9_A 166 HQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMH 245 (347)
T ss_dssp HHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEEC
T ss_pred HHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccC
Confidence 468999999999999 77522 35667788888899988888888888888
Q ss_pred -EEEE
Q 029198 190 -GHVK 193 (197)
Q Consensus 190 -i~v~ 193 (197)
+|++
T Consensus 246 ~i~v~ 250 (347)
T 4id9_A 246 ITDTR 250 (347)
T ss_dssp EEEHH
T ss_pred cEeHH
Confidence 7764
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-29 Score=191.85 Aligned_cols=178 Identities=21% Similarity=0.273 Sum_probs=146.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++++++|+++| .++++++......... ...+.++.+|+.| +++.++++ ++|+|||+|
T Consensus 7 TGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~-~~~~~~~~--~~d~vih~a 71 (313)
T 3ehe_A 7 TGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----------NEAARLVKADLAA-DDIKDYLK--GAEEVWHIA 71 (313)
T ss_dssp ETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----------CTTEEEECCCTTT-SCCHHHHT--TCSEEEECC
T ss_pred ECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----------CCCcEEEECcCCh-HHHHHHhc--CCCEEEECC
Confidence 7999999999999999999 5556665443322211 2568999999999 88999998 999999999
Q ss_pred CCC----------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh-
Q 029198 81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE- 140 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~- 140 (197)
+.. ..++.+++++++ ++++||++||..+||.....+.+|+.+..|.+.| .+|..+|.+++
T Consensus 72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~ 151 (313)
T 3ehe_A 72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIES 151 (313)
T ss_dssp CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 853 124677888887 7889999999999998888889999888888888 99999999874
Q ss_pred ---hcCCcEEEEccceeeCCCCCCChHHHHHHHHHcC-CCcccCCCCceeEEEEEEE
Q 029198 141 ---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 141 ---~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~i~v~ 193 (197)
+.+++++++||+++|||+....++..++..+.++ .++.+++++++.++|+|++
T Consensus 152 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 208 (313)
T 3ehe_A 152 YCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYIS 208 (313)
T ss_dssp HHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHH
T ss_pred HHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHH
Confidence 4699999999999999987667777777777666 5677889999999998865
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-29 Score=194.70 Aligned_cols=182 Identities=18% Similarity=0.245 Sum_probs=140.9
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|+++| ++|++++|++......+. ...+++++.+|+.|++++.++++ ++|+|||+
T Consensus 38 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~---------~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vih~ 106 (377)
T 2q1s_A 38 VGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP---------DHPAVRFSETSITDDALLASLQD--EYDYVFHL 106 (377)
T ss_dssp ETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC---------CCTTEEEECSCTTCHHHHHHCCS--CCSEEEEC
T ss_pred ECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc---------CCCceEEEECCCCCHHHHHHHhh--CCCEEEEC
Confidence 7999999999999999999 999999998655322221 12578999999999999999998 99999999
Q ss_pred cCCCc----------------cchHHHHHhCC---CCCcEEEEecceecccCCCCCCC--CCC---CC-CCCCcc-hhhh
Q 029198 80 NGREA----------------DEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC--ETD---TV-DPKSRH-KGKL 133 (197)
Q Consensus 80 a~~~~----------------~~~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~~~~~--e~~---~~-~~~~~~-~~k~ 133 (197)
|+... .++.+++++++ ++++||++||..+||.....+++ |++ +. .|.+.| .+|.
T Consensus 107 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~ 186 (377)
T 2q1s_A 107 ATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKI 186 (377)
T ss_dssp CCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHH
T ss_pred CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHH
Confidence 98642 24678889887 36899999999999976665677 776 55 667778 9999
Q ss_pred hHHHHHhh----cCCcEEEEccceeeCCCC---------C-----CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 134 NTESVLES----KGVNWTSLRPVYIYGPLN---------Y-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 134 ~~e~~~~~----~~~~~~i~r~~~i~g~~~---------~-----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+|.+++. .+++++++||+++||+.. . ..++..++..+.+++++.+++++++.++|+|++
T Consensus 187 ~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~ 264 (377)
T 2q1s_A 187 FGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVE 264 (377)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHH
Confidence 99998754 589999999999999975 2 356778888888999888888888999998764
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=190.15 Aligned_cols=182 Identities=19% Similarity=0.300 Sum_probs=145.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++++++|+++|++|++++|........+ ..+++++.+|+.|.+++.++++..++|+|||+|
T Consensus 7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a 75 (330)
T 2c20_A 7 CGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI-----------TEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA 75 (330)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS-----------CTTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred ECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhc-----------CCCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence 799999999999999999999999999765422111 136889999999999999998766899999999
Q ss_pred CCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhh
Q 029198 81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~ 141 (197)
+... .++.+++++++ ++++||++||..+|+.....+++|+++..|.+.| .+|..+|.+++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~ 155 (330)
T 2c20_A 76 ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHW 155 (330)
T ss_dssp CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred cccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHH
Confidence 8642 24677888887 7789999999999998777788999888888888 999999998754
Q ss_pred ----cCCcEEEEccceeeCCCC----------CCChHHHHHHHHHc-CCCcccCC------CCceeEEEEEEE
Q 029198 142 ----KGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKA-GRPIPIPG------SGIQVTQLGHVK 193 (197)
Q Consensus 142 ----~~~~~~i~r~~~i~g~~~----------~~~~~~~~~~~~~~-~~~~~~~~------~g~~~~~~i~v~ 193 (197)
.+++++++||+++||++. ...++..+++.+.. +.++.+++ ++++.++|+||+
T Consensus 156 ~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~ 228 (330)
T 2c20_A 156 YSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVE 228 (330)
T ss_dssp HHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHH
T ss_pred HHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHH
Confidence 589999999999999852 13455666555543 34565655 678889998764
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=189.24 Aligned_cols=178 Identities=19% Similarity=0.189 Sum_probs=146.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++++++|+++|++|++++|++.. .. + ++.++.+|+.|++++.++++..++|+|||+|
T Consensus 18 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-l-------------~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 82 (321)
T 2pk3_A 18 TGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-P-------------NVEMISLDIMDSQRVKKVISDIKPDYIFHLA 82 (321)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-T-------------TEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-c-------------eeeEEECCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 7999999999999999999999999998654 11 0 5788999999999999999854699999999
Q ss_pred CCCc----------------cchHHHHHhCC---CCCcEEEEecceecccC--CCCCCCCCCCCCCCCcc-hhhhhHHHH
Q 029198 81 GREA----------------DEVEPILDALP---NLEQFIYCSSAGVYLKS--DLLPHCETDTVDPKSRH-KGKLNTESV 138 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~---~~~~~v~~Ss~~vyg~~--~~~~~~e~~~~~~~~~~-~~k~~~e~~ 138 (197)
+... .++.+++++++ ++++||++||..+|+.. ...+++|+++..|.+.| .+|..+|.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~ 162 (321)
T 2pk3_A 83 AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGML 162 (321)
T ss_dssp SCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHH
T ss_pred cccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence 8742 23677888877 47899999999999875 56688898888888888 999999998
Q ss_pred Hhh----cCCcEEEEccceeeCCCCCC-ChHHHHHHHHHc---C--CCcccCCCCceeEEEEEEE
Q 029198 139 LES----KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKA---G--RPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 139 ~~~----~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~---~--~~~~~~~~g~~~~~~i~v~ 193 (197)
++. .+++++++||+++|||+... .++..++..+.+ | +++..++++++.++|+|++
T Consensus 163 ~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~ 227 (321)
T 2pk3_A 163 ARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVR 227 (321)
T ss_dssp HHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHH
T ss_pred HHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHH
Confidence 754 38999999999999997543 356666766666 7 5677778888899997764
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-28 Score=187.96 Aligned_cols=185 Identities=21% Similarity=0.341 Sum_probs=150.4
Q ss_pred CCcccchHHHHHHHHHHC---C---CeEEEEecCCCCc-cCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCc
Q 029198 1 MGGTRFIGVFLSRLLVKE---G---HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~---g---~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~ 73 (197)
||||||+|++++++|+++ | ++|++++|..... ...+. . .....+++++.+|+.|++++.+++. ++
T Consensus 6 TGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~~~~~Dl~d~~~~~~~~~--~~ 77 (337)
T 1r6d_A 6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA-----P-VDADPRLRFVHGDIRDAGLLARELR--GV 77 (337)
T ss_dssp ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG-----G-GTTCTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred ECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhh-----h-cccCCCeEEEEcCCCCHHHHHHHhc--CC
Confidence 799999999999999997 8 9999999975321 11110 0 0012578999999999999999997 99
Q ss_pred cEEEeccCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhh
Q 029198 74 DVVYDINGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN 134 (197)
Q Consensus 74 d~vi~~a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~ 134 (197)
|+|||+|+... .++.++++++. ++++||++||..+||.....+++|+++..|.+.| .+|..
T Consensus 78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~ 157 (337)
T 1r6d_A 78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAG 157 (337)
T ss_dssp CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHH
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHH
Confidence 99999998642 34678888887 7789999999999997666678888888888888 99999
Q ss_pred HHHHHh----hcCCcEEEEccceeeCCCCC-CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 135 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 135 ~e~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+|.+++ +.+++++++||+++|||+.. ..++..++..+.+++++.+++++++.++|+|++
T Consensus 158 ~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 221 (337)
T 1r6d_A 158 SDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTD 221 (337)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHH
Confidence 999874 35899999999999999753 356777888888888888888899999998764
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-29 Score=193.00 Aligned_cols=188 Identities=18% Similarity=0.209 Sum_probs=147.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||+||++++++|+++|++|++++|+.+...... ..+.. ...++.++.+|+.|++++.++++..++|+|||+
T Consensus 11 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 85 (341)
T 3enk_A 11 TGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAI-----ARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHF 85 (341)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHH-----HHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred ecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHH-----HHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEEC
Confidence 799999999999999999999999999876532111 01111 134789999999999999999987789999999
Q ss_pred cCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh
Q 029198 80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE 140 (197)
Q Consensus 80 a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~ 140 (197)
|+... .++.+++++++ +.++||++||..+||.....+++|+.+..|.+.| .+|..+|.+++
T Consensus 86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~ 165 (341)
T 3enk_A 86 AALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILR 165 (341)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHH
T ss_pred ccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence 98742 24677888887 7789999999999998888889999988888888 99999999875
Q ss_pred h----c-CCcEEEEccceeeCCCC-----------CCChHHHHHHHHHcC-CCcccCC------CCceeEEEEEEE
Q 029198 141 S----K-GVNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVK 193 (197)
Q Consensus 141 ~----~-~~~~~i~r~~~i~g~~~-----------~~~~~~~~~~~~~~~-~~~~~~~------~g~~~~~~i~v~ 193 (197)
. . +++++++||+++|||+. ...+++.+.+.+... .++.++| +|++.++|+||+
T Consensus 166 ~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 241 (341)
T 3enk_A 166 DVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVV 241 (341)
T ss_dssp HHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHH
T ss_pred HHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHH
Confidence 4 3 49999999999999853 134455544444332 4555666 789999998874
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-29 Score=190.53 Aligned_cols=182 Identities=23% Similarity=0.281 Sum_probs=147.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+|++|++++++|+++|++|++++|........+ ..+++++.+|+.|++++.++++..++|+|||+|
T Consensus 6 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a 74 (311)
T 2p5y_A 6 TGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-----------PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQA 74 (311)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS-----------CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc-----------ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECc
Confidence 799999999999999999999999998544321111 135788999999999999998756899999999
Q ss_pred CCCc----------------cchHHHHHhCC--CCCcEEEEecc-eeccc-CCCCCCCCCCCCCCCCcc-hhhhhHHHHH
Q 029198 81 GREA----------------DEVEPILDALP--NLEQFIYCSSA-GVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVL 139 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~-~vyg~-~~~~~~~e~~~~~~~~~~-~~k~~~e~~~ 139 (197)
+... .++.+++++++ ++++||++||. .+||. ....+.+|+++..|.+.| .+|..+|.++
T Consensus 75 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~ 154 (311)
T 2p5y_A 75 AQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYL 154 (311)
T ss_dssp SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Confidence 8642 23567888887 77899999998 89986 555678888887787788 9999999987
Q ss_pred h----hcCCcEEEEccceeeCCCCCC----ChHHHHHHHHHcCCCcccC-----CCCceeEEEEEEE
Q 029198 140 E----SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIP-----GSGIQVTQLGHVK 193 (197)
Q Consensus 140 ~----~~~~~~~i~r~~~i~g~~~~~----~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~i~v~ 193 (197)
+ +.+++++++||+++|||+... .++..+++.+.+++++.++ +++.+.++|+|++
T Consensus 155 ~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 221 (311)
T 2p5y_A 155 SVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVG 221 (311)
T ss_dssp HHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHH
T ss_pred HHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHH
Confidence 4 368999999999999997432 3566777888888887777 8888899997764
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=189.79 Aligned_cols=186 Identities=19% Similarity=0.151 Sum_probs=148.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh--ccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
||||||+|++++++|+++|++|++++|++..... ..+.. ...+++++.+|+.|++++.++++..++|+|||
T Consensus 20 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (335)
T 1rpn_A 20 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR-------WRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN 92 (335)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-------HHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred ECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc-------cchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence 7999999999999999999999999998654210 00111 12578999999999999999998667899999
Q ss_pred ccCCCc----------------cchHHHHHhCC--CC-CcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHH
Q 029198 79 INGREA----------------DEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV 138 (197)
Q Consensus 79 ~a~~~~----------------~~~~~ll~~~~--~~-~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~ 138 (197)
+|+... .++.+++++++ ++ ++||++||..+|+.....+++|+++..|.+.| .+|..+|.+
T Consensus 93 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~ 172 (335)
T 1rpn_A 93 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWI 172 (335)
T ss_dssp CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred CccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHH
Confidence 998642 23667888887 65 89999999999998776788999888888888 999999998
Q ss_pred Hhh----cCCcEEEEccceeeCCCCCCCh----HHHHHHHHHcCCC-cccCCCCceeEEEEEEE
Q 029198 139 LES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 139 ~~~----~~~~~~i~r~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~g~~~~~~i~v~ 193 (197)
++. .+++++++||+++|||+....+ +..++..+..++. ...++++++.++|+||+
T Consensus 173 ~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~ 236 (335)
T 1rpn_A 173 TVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAG 236 (335)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHH
T ss_pred HHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHH
Confidence 754 5899999999999999754433 3445666667763 33568889999998764
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=190.75 Aligned_cols=186 Identities=17% Similarity=0.214 Sum_probs=148.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++++++|+++|++|++++|++....... .......+++++.+|+.|++++.++++..++|+|||+|
T Consensus 15 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 88 (357)
T 1rkx_A 15 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF------ETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA 88 (357)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHH------HHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhh------HhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence 799999999999999999999999999876532110 00011357899999999999999999855699999999
Q ss_pred CCC----------------ccchHHHHHhCC--C-CCcEEEEecceecccCCC-CCCCCCCCCCCCCcc-hhhhhHHHHH
Q 029198 81 GRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL 139 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~-~~~~e~~~~~~~~~~-~~k~~~e~~~ 139 (197)
+.. ..++.+++++++ + +++||++||..+||.... .+++|+++..|.+.| .+|..+|.++
T Consensus 89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~ 168 (357)
T 1rkx_A 89 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT 168 (357)
T ss_dssp SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred CCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence 853 223567888877 5 789999999999986543 467777777777788 9999999987
Q ss_pred hhc-------------CCcEEEEccceeeCCCCC--CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 140 ESK-------------GVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 140 ~~~-------------~~~~~i~r~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+.. +++++++||+++|||+.. ..++..+++.+.+++++.++ ++++.++|+||+
T Consensus 169 ~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~v~v~ 236 (357)
T 1rkx_A 169 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR-NPHAIRPWQHVL 236 (357)
T ss_dssp HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECS-CTTCEECCEETH
T ss_pred HHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEEC-CCCCeeccEeHH
Confidence 542 899999999999999753 35778888888889887665 567889998764
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=194.28 Aligned_cols=192 Identities=18% Similarity=0.191 Sum_probs=145.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccC------CCCCCC--chhh----hhccCceEEEeecCCCHHHHHhhh
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ------QLPGES--DQEF----AEFSSKILHLKGDRKDYDFVKSSL 68 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~--~~~~----~~~~~~~~~~~~d~~~~~~l~~~~ 68 (197)
||||||||++++++|+++|++|++++|....... .+.... ...+ .....+++++.+|+.|++++.+++
T Consensus 17 TG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 96 (404)
T 1i24_A 17 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF 96 (404)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred eCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHHHHHHH
Confidence 7999999999999999999999999986432100 000000 0000 011357899999999999999999
Q ss_pred hccCccEEEeccCCCc-------------------cchHHHHHhCC--CC-CcEEEEecceecccCCCCCCCCC------
Q 029198 69 SAKGFDVVYDINGREA-------------------DEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCET------ 120 (197)
Q Consensus 69 ~~~~~d~vi~~a~~~~-------------------~~~~~ll~~~~--~~-~~~v~~Ss~~vyg~~~~~~~~e~------ 120 (197)
+..++|+|||+|+... .++.+++++++ +. ++||++||..+||... .+++|+
T Consensus 97 ~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~E~~~~~~~ 175 (404)
T 1i24_A 97 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIEEGYITITH 175 (404)
T ss_dssp HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBCSSEEEEEE
T ss_pred hccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCCcccccccc
Confidence 8445999999998632 23567888887 65 5999999999998654 356664
Q ss_pred --------CCCCCCCcc-hhhhhHHHHHhh----cCCcEEEEccceeeCCCCC------------------CChHHHHHH
Q 029198 121 --------DTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------------------NPVEEWFFH 169 (197)
Q Consensus 121 --------~~~~~~~~~-~~k~~~e~~~~~----~~~~~~i~r~~~i~g~~~~------------------~~~~~~~~~ 169 (197)
.+..|.+.| .+|..+|.+++. .+++++++||+++|||+.. ..++..++.
T Consensus 176 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (404)
T 1i24_A 176 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCV 255 (404)
T ss_dssp TTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHH
T ss_pred ccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHH
Confidence 245566778 999999997643 4899999999999999752 346778888
Q ss_pred HHHcCCCcccCCCCceeEEEEEEE
Q 029198 170 RLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 170 ~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+..++++.+++++++.++|+||+
T Consensus 256 ~~~~g~~~~~~g~g~~~~~~i~v~ 279 (404)
T 1i24_A 256 QAAVGHPLTVYGKGGQTRGYLDIR 279 (404)
T ss_dssp HHHHTCCEEEETTSCCEEEEEEHH
T ss_pred HHHcCCeeEEeCCCCceECcEEHH
Confidence 888999888889999999998764
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-28 Score=186.16 Aligned_cols=185 Identities=23% Similarity=0.280 Sum_probs=146.7
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCc-cCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
||||||||++++++|+++| ++|++++|..... ...+.. +. ...+++++.+|+.|++++.+++. ++|+||
T Consensus 9 TGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~-----~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi 80 (336)
T 2hun_A 9 TGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKD-----LE-DDPRYTFVKGDVADYELVKELVR--KVDGVV 80 (336)
T ss_dssp ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTT-----TT-TCTTEEEEECCTTCHHHHHHHHH--TCSEEE
T ss_pred ECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhh-----hc-cCCceEEEEcCCCCHHHHHHHhh--CCCEEE
Confidence 7999999999999999997 8999999975321 111110 00 13578999999999999999997 999999
Q ss_pred eccCCCc----------------cchHHHHHhCC--CC-CcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHH
Q 029198 78 DINGREA----------------DEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES 137 (197)
Q Consensus 78 ~~a~~~~----------------~~~~~ll~~~~--~~-~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~ 137 (197)
|+|+... .++.++++++. +. ++||++||..+||.....+++|+++..|.+.| .+|..+|.
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~ 160 (336)
T 2hun_A 81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDM 160 (336)
T ss_dssp ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHH
T ss_pred ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHH
Confidence 9998742 23667888877 43 79999999999997766688898888888888 99999999
Q ss_pred HHhh----cCCcEEEEccceeeCCCCC-CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 138 VLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 138 ~~~~----~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+++. .+++++++||+++|||... ..++..++..+.+++++.+++++.+.++|+|++
T Consensus 161 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 221 (336)
T 2hun_A 161 LVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVE 221 (336)
T ss_dssp HHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHH
T ss_pred HHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHH
Confidence 8753 6899999999999999753 356777888888888888888888999998764
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-28 Score=188.68 Aligned_cols=180 Identities=21% Similarity=0.267 Sum_probs=144.0
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~ 78 (197)
||||||+|++++++|+++ |++|++++|++........ ..+++++.+|+.| .+.+.++++ ++|+|||
T Consensus 6 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~--~~d~vih 73 (345)
T 2bll_A 6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP 73 (345)
T ss_dssp ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred ECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc----------CCCeEEEeccccCcHHHHHhhcc--CCCEEEE
Confidence 799999999999999998 8999999998765322111 2478999999998 467888888 8999999
Q ss_pred ccCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCC-------CCCCcc-hhh
Q 029198 79 INGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK 132 (197)
Q Consensus 79 ~a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~-------~~~~~~-~~k 132 (197)
+|+... .++.+++++++ + ++||++||..+|+.....+++|+++. .|.+.| .+|
T Consensus 74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK 152 (345)
T 2bll_A 74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK 152 (345)
T ss_dssp CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHH
T ss_pred cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHH
Confidence 998642 23567888887 5 89999999999997766677777643 233357 899
Q ss_pred hhHHHHHh----hcCCcEEEEccceeeCCCCC---------CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 133 LNTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 133 ~~~e~~~~----~~~~~~~i~r~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
..+|.+++ +.+++++++||+++|||+.. ..++..++..+.+++++.+++++++.++|+|++
T Consensus 153 ~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 226 (345)
T 2bll_A 153 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIR 226 (345)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHH
Confidence 99999874 46899999999999999742 235677788888898888888888999998764
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-28 Score=188.14 Aligned_cols=175 Identities=18% Similarity=0.156 Sum_probs=138.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++++++|+++|++|++++|++..... +. ..+++++.+|+.|++++.++++ ++|+|||+|
T Consensus 19 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-l~----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~a 85 (342)
T 2x4g_A 19 LGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-LA----------YLEPECRVAEMLDHAGLERALR--GLDGVIFSA 85 (342)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG-GG----------GGCCEEEECCTTCHHHHHHHTT--TCSEEEEC-
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh-hc----------cCCeEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence 7999999999999999999999999998765321 10 1368899999999999999998 899999999
Q ss_pred CCCc--------------cchHHHHHhCC--CCCcEEEEecceecccCCC--CCCCCCCCCCC----CCcc-hhhhhHHH
Q 029198 81 GREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDL--LPHCETDTVDP----KSRH-KGKLNTES 137 (197)
Q Consensus 81 ~~~~--------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~--~~~~e~~~~~~----~~~~-~~k~~~e~ 137 (197)
+... .++.+++++++ ++++||++||..+|+.... .+ +|+++..| .+.| .+|..+|.
T Consensus 86 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~~e~ 164 (342)
T 2x4g_A 86 GYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWALDE 164 (342)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHHHHH
T ss_pred ccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHHHHHHHH
Confidence 8532 23678899888 7899999999999986543 34 78888777 6778 99999999
Q ss_pred HHhh---cCCcEEEEccceeeCCCC-CCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 138 VLES---KGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 138 ~~~~---~~~~~~i~r~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+++. .+++++++||+++||++. ... +..++..+.+++...+ +++.++|+|++
T Consensus 165 ~~~~~~~~g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~ 220 (342)
T 2x4g_A 165 QAREQARNGLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHY---VAGQRNVIDAA 220 (342)
T ss_dssp HHHHHHHTTCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEE---ECCEEEEEEHH
T ss_pred HHHHHhhcCCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccc---cCCCcceeeHH
Confidence 8754 389999999999999975 323 5566777778876554 46778887764
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.8e-28 Score=186.53 Aligned_cols=193 Identities=19% Similarity=0.182 Sum_probs=146.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCC-Cchhhhh-ccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE-SDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||||+||++++++|+++|++|++++|........-... ....+.. ...+++++.+|+.|++++.++++..++|+|||
T Consensus 8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih 87 (348)
T 1ek6_A 8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIH 87 (348)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 799999999999999999999999999754311000000 0001111 12468999999999999999987668999999
Q ss_pred ccCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCC-CCcc-hhhhhHHHH
Q 029198 79 INGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-KGKLNTESV 138 (197)
Q Consensus 79 ~a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~~-~~k~~~e~~ 138 (197)
+|+... .++.+++++++ ++++||++||..+|+.....+++|+++..| .+.| .+|..+|.+
T Consensus 88 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~ 167 (348)
T 1ek6_A 88 FAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM 167 (348)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred CCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHH
Confidence 998642 23677888887 778999999999999877778899888777 6778 999999998
Q ss_pred Hhh---cC--CcEEEEccceeeCCCC-----------CCChHHHHHHHHH-cCCCcccCC------CCceeEEEEEEE
Q 029198 139 LES---KG--VNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVK 193 (197)
Q Consensus 139 ~~~---~~--~~~~i~r~~~i~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~g~~~~~~i~v~ 193 (197)
++. .+ ++++++||+++|||.. ...++..+...+. +++++.+++ +|++.++|+||+
T Consensus 168 ~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 245 (348)
T 1ek6_A 168 IRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVV 245 (348)
T ss_dssp HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH
T ss_pred HHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHH
Confidence 754 24 9999999999999842 1346666667666 667776665 678889998764
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=185.48 Aligned_cols=183 Identities=19% Similarity=0.233 Sum_probs=147.9
Q ss_pred CCcccchHHHHHHHHHHC--CCeEEEEecCCCCcc-CCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
||||||||++++++|+++ |++|++++|+..... ..+. .+ ...+++++.+|+.|++++.++++ ++|+||
T Consensus 10 TGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~-----~~--~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi 80 (348)
T 1oc2_A 10 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE-----AI--LGDRVELVVGDIADAELVDKLAA--KADAIV 80 (348)
T ss_dssp ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG-----GG--CSSSEEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred eCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHh-----hh--ccCCeEEEECCCCCHHHHHHHhh--cCCEEE
Confidence 799999999999999999 899999999753211 1111 00 02578999999999999999998 789999
Q ss_pred eccCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCC------------CCCCCCCCCCCCC
Q 029198 78 DINGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDL------------LPHCETDTVDPKS 127 (197)
Q Consensus 78 ~~a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~------------~~~~e~~~~~~~~ 127 (197)
|+|+... .++.++++++. +. +||++||..+||.... .+++|+++..|.+
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~ 159 (348)
T 1oc2_A 81 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSS 159 (348)
T ss_dssp ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCS
T ss_pred ECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCC
Confidence 9998642 23678888887 66 9999999999986532 5788888877878
Q ss_pred cc-hhhhhHHHHHhh----cCCcEEEEccceeeCCCCC-CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 128 RH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 128 ~~-~~k~~~e~~~~~----~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.| .+|..+|.+++. .+++++++||+++|||+.. ..++..++..+.+++++.+++++.+.++|+|++
T Consensus 160 ~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 231 (348)
T 1oc2_A 160 PYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTN 231 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHH
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHH
Confidence 88 999999998753 5899999999999999753 356777788888888888888889999998764
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-28 Score=185.92 Aligned_cols=166 Identities=23% Similarity=0.199 Sum_probs=140.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|| +||+|++|+++|+++|++|++++|+++.. ..+++++.+|+.|++++.++++. ++|+|||+|
T Consensus 9 tG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih~a 71 (286)
T 3gpi_A 9 AG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------------PAGVQTLIADVTRPDTLASIVHL-RPEILVYCV 71 (286)
T ss_dssp EC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------------CTTCCEEECCTTCGGGCTTGGGG-CCSEEEECH
T ss_pred EC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------ccCCceEEccCCChHHHHHhhcC-CCCEEEEeC
Confidence 68 59999999999999999999999987652 25788999999999999998872 499999998
Q ss_pred CC-----------CccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhcCCcE
Q 029198 81 GR-----------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNW 146 (197)
Q Consensus 81 ~~-----------~~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~ 146 (197)
+. +..++.+++++++ ++++||++||..+||.....+++|+++..|.+.| .+|..+|.+ .+. +++
T Consensus 72 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~~ 149 (286)
T 3gpi_A 72 AASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YSS 149 (286)
T ss_dssp HHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SSE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CCe
Confidence 75 2446889999998 7899999999999998887788999999998888 999999999 777 999
Q ss_pred EEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 147 ~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+++||+++||++.. .++..+.+ +. .++++++.++|+|++
T Consensus 150 ~ilR~~~v~G~~~~-----~~~~~~~~-~~--~~~~~~~~~~~i~v~ 188 (286)
T 3gpi_A 150 TILRFSGIYGPGRL-----RMIRQAQT-PE--QWPARNAWTNRIHRD 188 (286)
T ss_dssp EEEEECEEEBTTBC-----HHHHHTTC-GG--GSCSSBCEECEEEHH
T ss_pred EEEecccccCCCch-----hHHHHHHh-cc--cCCCcCceeEEEEHH
Confidence 99999999999642 34455555 32 347788899997764
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.9e-28 Score=189.99 Aligned_cols=180 Identities=21% Similarity=0.256 Sum_probs=144.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++++++|+++|++|++++|++...... ...+++++.+|+.|.+++.++++ ++|+|||+|
T Consensus 35 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------~~~~v~~~~~Dl~d~~~~~~~~~--~~d~Vih~A 101 (379)
T 2c5a_A 35 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-----------DMFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA 101 (379)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-----------GGTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred ECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-----------ccCCceEEECCCCCHHHHHHHhC--CCCEEEECc
Confidence 79999999999999999999999999987652211 02468899999999999999998 999999999
Q ss_pred CCCc-----------------cchHHHHHhCC--CCCcEEEEecceecccCCC-----CCCCCCC--CCCCCCcc-hhhh
Q 029198 81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDL-----LPHCETD--TVDPKSRH-KGKL 133 (197)
Q Consensus 81 ~~~~-----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~-----~~~~e~~--~~~~~~~~-~~k~ 133 (197)
+... .++.+++++++ ++++||++||..+|+.... .+++|++ +..|.+.| .+|.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~ 181 (379)
T 2c5a_A 102 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL 181 (379)
T ss_dssp CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred eecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHH
Confidence 8642 12567888887 7889999999999985432 3466665 45566778 9999
Q ss_pred hHHHHHh----hcCCcEEEEccceeeCCCCCC-----ChHHHHHHHHHcCCC-cccCCCCceeEEEEEEE
Q 029198 134 NTESVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 134 ~~e~~~~----~~~~~~~i~r~~~i~g~~~~~-----~~~~~~~~~~~~~~~-~~~~~~g~~~~~~i~v~ 193 (197)
.+|.+++ +.+++++++||+++|||+... .++..++..+.++++ +.+++++++.++|+|++
T Consensus 182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~ 251 (379)
T 2c5a_A 182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFID 251 (379)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHH
Confidence 9999874 358999999999999996432 267778888877776 77788888999998764
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-28 Score=188.41 Aligned_cols=171 Identities=14% Similarity=0.169 Sum_probs=139.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++++++|+++|+ +.... ...++++.+|+.|++.+.++++..++|+|||+|
T Consensus 12 tGatG~iG~~l~~~L~~~g~------~~~~~----------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A 69 (319)
T 4b8w_A 12 TGGSGLVGKAIQKVVADGAG------LPGED----------------WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLA 69 (319)
T ss_dssp ETCSSHHHHHHHHHHHTTTC------CTTCE----------------EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECC
T ss_pred ECCCcHHHHHHHHHHHhcCC------ccccc----------------ccccCceecccCCHHHHHHHHhhcCCCEEEECc
Confidence 79999999999999999998 11111 124555679999999999999866799999999
Q ss_pred CCCc-----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCC----CCCCCCc-c-hhhhhH
Q 029198 81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKSR-H-KGKLNT 135 (197)
Q Consensus 81 ~~~~-----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~----~~~~~~~-~-~~k~~~ 135 (197)
+... .++.+++++++ ++++||++||..+||.....+++|++ ++.|... | .+|..+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~ 149 (319)
T 4b8w_A 70 AMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMI 149 (319)
T ss_dssp CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHH
T ss_pred eecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHH
Confidence 8742 23677899988 78899999999999988888899887 5666663 7 899999
Q ss_pred HHHHh----hcCCcEEEEccceeeCCCCC-----CChHHHHHHH----HHcCCCcccCCCCceeEEEEEEE
Q 029198 136 ESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHR----LKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 136 e~~~~----~~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
|.+++ +.+++++++||+++|||+.. ..+++.++.. +..++++.+++++++.++|+||+
T Consensus 150 E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 220 (319)
T 4b8w_A 150 DVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSL 220 (319)
T ss_dssp HHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHH
T ss_pred HHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHH
Confidence 99874 47999999999999999743 2456666666 78899999999999999998875
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=183.90 Aligned_cols=179 Identities=18% Similarity=0.197 Sum_probs=143.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||++|++++++|+++|++|++++|+.......... ..+++++.+|+.|.+++.++++..++|+|||+|
T Consensus 26 TGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A 96 (330)
T 2pzm_A 26 TGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP---------VAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA 96 (330)
T ss_dssp ETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc---------cCCceEEEeeCCCHHHHHHHHhhcCCCEEEECC
Confidence 79999999999999999999999999976542211111 146889999999999999998766899999999
Q ss_pred CCCc-------------cchHHHHHhCC--CCCcEEEEecceecccCCCC--CCCCCCCCCCCCcc-hhhhhHHHHHhhc
Q 029198 81 GREA-------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNTESVLESK 142 (197)
Q Consensus 81 ~~~~-------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~--~~~e~~~~~~~~~~-~~k~~~e~~~~~~ 142 (197)
+... .++.++++++. ++++||++||..+|+..... +++|++ .|.+.| .+|..+|.+++..
T Consensus 97 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~~e~~~~~~ 174 (330)
T 2pzm_A 97 AAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTAGEAFLMMS 174 (330)
T ss_dssp CCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHHHHHHHHTC
T ss_pred ccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHHHHHHHHHc
Confidence 8643 23567888887 78899999999999865443 677776 566678 9999999999888
Q ss_pred CCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+++++++||+++|||+....++..++..+.+++ .+++++. .++|+|++
T Consensus 175 ~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~ 222 (330)
T 2pzm_A 175 DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMS 222 (330)
T ss_dssp SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHH
T ss_pred CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHH
Confidence 999999999999999864466777777777776 4556666 78887654
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=185.45 Aligned_cols=163 Identities=15% Similarity=0.119 Sum_probs=141.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||++|++++++|+++|++|++++|. .+|+.|.+++.++++..++|+|||+|
T Consensus 11 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~D~~d~~~~~~~~~~~~~d~vi~~a 64 (287)
T 3sc6_A 11 TGANGQLGKQLQEELNPEEYDIYPFDKK--------------------------LLDITNISQVQQVVQEIRPHIIIHCA 64 (287)
T ss_dssp ESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------------TSCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------------ccCCCCHHHHHHHHHhcCCCEEEECC
Confidence 7999999999999999999999999992 26889999999999866899999999
Q ss_pred CCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhh
Q 029198 81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~ 141 (197)
+... .++.+++++++ +. +||++||..+|+.....+++|+++..|.+.| .+|..+|.+++.
T Consensus 65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~ 143 (287)
T 3sc6_A 65 AYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKE 143 (287)
T ss_dssp CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred cccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 8743 23678899888 65 7999999999998877899999999998888 999999999999
Q ss_pred cCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 142 ~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
...+++++||+++|||+. ..++..++..+.+++++.++++ +.++|+|++
T Consensus 144 ~~~~~~ilR~~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~ 192 (287)
T 3sc6_A 144 LHNKYFIVRTSWLYGKYG-NNFVKTMIRLGKEREEISVVAD--QIGSPTYVA 192 (287)
T ss_dssp HCSSEEEEEECSEECSSS-CCHHHHHHHHHTTCSEEEEECS--CEECCEEHH
T ss_pred hCCCcEEEeeeeecCCCC-CcHHHHHHHHHHcCCCeEeecC--cccCceEHH
Confidence 888999999999999964 4677888888888988887754 778887764
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-28 Score=186.70 Aligned_cols=180 Identities=15% Similarity=0.187 Sum_probs=136.0
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc---CccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~---~~d~v 76 (197)
|||||++|++++++|+++| ++|++++|++..... ..+ .++. +.+|+.|.+.+.++++.. ++|+|
T Consensus 5 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-------~~~----~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v 72 (310)
T 1eq2_A 5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------VNL----VDLN-IADYMDKEDFLIQIMAGEEFGDVEAI 72 (310)
T ss_dssp ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-------HHH----HTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred EcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh-------hhc----Ccce-eccccccHHHHHHHHhccccCCCcEE
Confidence 7999999999999999999 999999997654210 001 1233 678999999999888731 59999
Q ss_pred EeccCCCc--------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHH
Q 029198 77 YDINGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL 139 (197)
Q Consensus 77 i~~a~~~~--------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~ 139 (197)
||+|+... .++.+++++++ ++ +||++||..+|+.....+++|+++..|.+.| .+|..+|.++
T Consensus 73 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~ 151 (310)
T 1eq2_A 73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV 151 (310)
T ss_dssp EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred EECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence 99998642 23678888888 77 9999999999998776688898888888888 9999999987
Q ss_pred hh----cCCcEEEEccceeeCCCCC-----CChHHHHHHHHHcCCCcccCCCCce-eEEEEEEE
Q 029198 140 ES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVK 193 (197)
Q Consensus 140 ~~----~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~i~v~ 193 (197)
+. .+++++++||+++|||+.. ..++..+++.+.+++++.+++++++ .++|+|++
T Consensus 152 ~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~ 215 (310)
T 1eq2_A 152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVG 215 (310)
T ss_dssp HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHH
T ss_pred HHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHH
Confidence 53 4899999999999999753 3567788888889988888888888 89998764
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-28 Score=184.22 Aligned_cols=179 Identities=13% Similarity=0.077 Sum_probs=140.7
Q ss_pred CCcccchHHHHHHHHHHC--CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
||||||+|++++++|+++ |++|++++|++.... + ..+++++.+|+.|.+++.++++..++|+|||
T Consensus 8 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----------~---~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih 74 (312)
T 2yy7_A 8 IGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD----------V---VNSGPFEVVNALDFNQIEHLVEVHKITDIYL 74 (312)
T ss_dssp ETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH----------H---HHSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred ECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc----------c---cCCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence 799999999999999999 899999999865411 0 1357889999999999999998678999999
Q ss_pred ccCCCc---------------cchHHHHHhCC--CCCcEEEEecceecccCC-CCCCCCCCCCCCCCcc-hhhhhHHHHH
Q 029198 79 INGREA---------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHCETDTVDPKSRH-KGKLNTESVL 139 (197)
Q Consensus 79 ~a~~~~---------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~-~~~~~e~~~~~~~~~~-~~k~~~e~~~ 139 (197)
+|+... .++.+++++++ ++++||++||..+|+... ..+.+|+.+..|.+.| .+|..+|.++
T Consensus 75 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~ 154 (312)
T 2yy7_A 75 MAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWC 154 (312)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHH
T ss_pred CCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHH
Confidence 998742 23667888887 778999999999998643 3567787777788888 9999999987
Q ss_pred hh----cCCcEEEEccceeeCCCCCC-----C-hHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 140 ES----KGVNWTSLRPVYIYGPLNYN-----P-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 140 ~~----~~~~~~i~r~~~i~g~~~~~-----~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+. .+++++++||+++||+...+ . +...+.+.+.. .++..++++++.++|+|++
T Consensus 155 ~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~ 217 (312)
T 2yy7_A 155 EYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIAD-KKYECFLSSETKMPMMYMD 217 (312)
T ss_dssp HHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHT-SEEEESSCTTCCEEEEEHH
T ss_pred HHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcC-CCeEEecCCCceeeeeeHH
Confidence 43 58999999999999975211 1 33444444444 4466677888899998765
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=187.04 Aligned_cols=193 Identities=21% Similarity=0.284 Sum_probs=143.4
Q ss_pred CCcccchHHHHHHHHH-HCCCeEEEEecCCCCccCCCCCCCchhh----hhc-----cCc---eEEEeecCCCHHHHHhh
Q 029198 1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPGESDQEF----AEF-----SSK---ILHLKGDRKDYDFVKSS 67 (197)
Q Consensus 1 tGatG~vG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~-----~~~---~~~~~~d~~~~~~l~~~ 67 (197)
||||||||++++++|+ +.|++|++++|........-.......+ .+. ..+ ++++.+|+.|++++.++
T Consensus 8 TGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 87 (397)
T 1gy8_A 8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGV 87 (397)
T ss_dssp ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHHHHHH
Confidence 7999999999999999 9999999999976542000000000011 000 124 88999999999999999
Q ss_pred hhccC-ccEEEeccCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCC-------CCCCCCCC
Q 029198 68 LSAKG-FDVVYDINGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD-------LLPHCETD 121 (197)
Q Consensus 68 ~~~~~-~d~vi~~a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~-------~~~~~e~~ 121 (197)
++..+ +|+|||+|+... .++.+++++++ ++++||++||..+|+... ..+++|++
T Consensus 88 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~ 167 (397)
T 1gy8_A 88 FTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA 167 (397)
T ss_dssp HHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTS
T ss_pred HHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccccCcCccC
Confidence 87555 999999998642 24677888887 778999999999998765 56888988
Q ss_pred CCCCCCcc-hhhhhHHHHHhh----cCCcEEEEccceeeCCCC----------CCChHHHHH----HHHHcCC-------
Q 029198 122 TVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLN----------YNPVEEWFF----HRLKAGR------- 175 (197)
Q Consensus 122 ~~~~~~~~-~~k~~~e~~~~~----~~~~~~i~r~~~i~g~~~----------~~~~~~~~~----~~~~~~~------- 175 (197)
+..|.+.| .+|..+|.+++. .+++++++||+++|||+. ...++..++ ..+..++
T Consensus 168 ~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
T 1gy8_A 168 KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHED 247 (397)
T ss_dssp CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--------
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccc
Confidence 88888888 999999998754 589999999999999953 234555555 2444443
Q ss_pred -----CcccCC------CCceeEEEEEEE
Q 029198 176 -----PIPIPG------SGIQVTQLGHVK 193 (197)
Q Consensus 176 -----~~~~~~------~g~~~~~~i~v~ 193 (197)
++.+++ ++++.++|+||+
T Consensus 248 ~~~~~~~~~~g~~~~~~~g~~~~~~v~v~ 276 (397)
T 1gy8_A 248 ASTDKRMPIFGTDYPTPDGTCVRDYVHVC 276 (397)
T ss_dssp ---CCCEEEECSCSSSTTSSCEECEEEHH
T ss_pred cccCCCceeecCcccCCCCCeeEeeEeHH
Confidence 455665 678899998865
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-28 Score=187.24 Aligned_cols=175 Identities=22% Similarity=0.321 Sum_probs=141.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCC---ccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP---IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
||||||+|++++++|+++|++|++++|++.. ....+.. .....+++++.+|+. ++|+||
T Consensus 13 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~~Dl~------------~~d~vi 74 (321)
T 3vps_A 13 TGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK------FLEKPVLELEERDLS------------DVRLVY 74 (321)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSE------EECSCGGGCCHHHHT------------TEEEEE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhh------hccCCCeeEEeCccc------------cCCEEE
Confidence 7999999999999999999999999998762 1111110 001134555555554 899999
Q ss_pred eccCCCc---------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHH
Q 029198 78 DINGREA---------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL 139 (197)
Q Consensus 78 ~~a~~~~---------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~ 139 (197)
|+|+... .++.+++++++ ++++||++||..+|+.....+++|+++..|.+.| .+|..+|.++
T Consensus 75 ~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~ 154 (321)
T 3vps_A 75 HLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVA 154 (321)
T ss_dssp ECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred ECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence 9998642 24578899988 8899999999999998888889999998898888 9999999987
Q ss_pred hh----cCC-cEEEEccceeeCCCCC-CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 140 ES----KGV-NWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 140 ~~----~~~-~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+. .++ +++++||+++|||+.. ..++..++..+..++++.+++++++.++|+|++
T Consensus 155 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 214 (321)
T 3vps_A 155 GAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYIT 214 (321)
T ss_dssp HHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHH
T ss_pred HHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHH
Confidence 54 688 9999999999999754 357788889999999888899999999998864
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=185.60 Aligned_cols=188 Identities=21% Similarity=0.295 Sum_probs=141.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++++++|+++|++|++++|......... ...+. ...+++++.+|+.|++++.++++..++|+|||+|
T Consensus 7 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 81 (347)
T 1orr_A 7 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDN----LHWLS-SLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 81 (347)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHH----HHHHH-TTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred eCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhh----hhhhc-cCCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence 799999999999999999999999998643211000 00011 1235889999999999999999844499999999
Q ss_pred CCCc----------------cchHHHHHhCC--CCC-cEEEEecceecccCCCCC----------------CCCCCCCCC
Q 029198 81 GREA----------------DEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLP----------------HCETDTVDP 125 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~--~~~-~~v~~Ss~~vyg~~~~~~----------------~~e~~~~~~ 125 (197)
+... .++.+++++++ +++ +||++||..+|+.....+ .+|+.+..|
T Consensus 82 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~ 161 (347)
T 1orr_A 82 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF 161 (347)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred cccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCC
Confidence 8642 23677888887 664 999999999998654322 456656666
Q ss_pred CCcc-hhhhhHHHHHhh----cCCcEEEEccceeeCCCCCC----ChHHHHHHHHHcCC-----CcccCCCCceeEEEEE
Q 029198 126 KSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGR-----PIPIPGSGIQVTQLGH 191 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~~----~~~~~~i~r~~~i~g~~~~~----~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~i~ 191 (197)
.+.| .+|..+|.+++. .+++++++||+++||+.... .++..++..+..++ ++.++++|++.++|+|
T Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~ 241 (347)
T 1orr_A 162 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 241 (347)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred CCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEE
Confidence 6678 999999998754 48999999999999997432 34566666665555 6777889999999987
Q ss_pred EE
Q 029198 192 VK 193 (197)
Q Consensus 192 v~ 193 (197)
++
T Consensus 242 v~ 243 (347)
T 1orr_A 242 AE 243 (347)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=181.60 Aligned_cols=166 Identities=19% Similarity=0.179 Sum_probs=140.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++++++|+ +|++|++++|++. ++.+|+.|++++.+++++.++|+|||+|
T Consensus 6 tGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------------~~~~D~~d~~~~~~~~~~~~~d~vih~a 62 (299)
T 1n2s_A 6 FGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------------EFCGDFSNPKGVAETVRKLRPDVIVNAA 62 (299)
T ss_dssp ECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------------SSCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------------cccccCCCHHHHHHHHHhcCCCEEEECc
Confidence 7999999999999999 8999999999752 1358999999999999855699999999
Q ss_pred CCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhh
Q 029198 81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~ 141 (197)
+... .++.+++++++ ++ +||++||..+|+.....+++|+++..|.+.| .+|..+|.+++.
T Consensus 63 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~ 141 (299)
T 1n2s_A 63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD 141 (299)
T ss_dssp CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred ccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 8642 23678999988 55 8999999999998777788999988888888 999999999988
Q ss_pred cCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 142 ~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
...+++++||+++||++.. .++..++..+.+++++.+++ ++.++|+|++
T Consensus 142 ~~~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~ 190 (299)
T 1n2s_A 142 NCPKHLIFRTSWVYAGKGN-NFAKTMLRLAKERQTLSVIN--DQYGAPTGAE 190 (299)
T ss_dssp HCSSEEEEEECSEECSSSC-CHHHHHHHHHHHCSEEEEEC--SCEECCEEHH
T ss_pred hCCCeEEEeeeeecCCCcC-cHHHHHHHHHhcCCCEEeec--CcccCCeeHH
Confidence 7789999999999999643 57777888888888877765 4778887764
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.6e-27 Score=181.81 Aligned_cols=187 Identities=20% Similarity=0.233 Sum_probs=147.8
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCC-ccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
||||||||++++++|++. |++|++++|+... ....+.. +. ...+++++.+|+.|.+++.++++..++|+|||
T Consensus 6 TGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~-----~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (361)
T 1kew_A 6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSD-----IS-ESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTT-----TT-TCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred ECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhh-----hh-cCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence 799999999999999998 7999999997532 1111110 00 12478999999999999999987568999999
Q ss_pred ccCCCc----------------cchHHHHHhCC----CCC-------cEEEEecceecccCCC--C--------CCCCCC
Q 029198 79 INGREA----------------DEVEPILDALP----NLE-------QFIYCSSAGVYLKSDL--L--------PHCETD 121 (197)
Q Consensus 79 ~a~~~~----------------~~~~~ll~~~~----~~~-------~~v~~Ss~~vyg~~~~--~--------~~~e~~ 121 (197)
+|+... .++.++++++. +++ +||++||..+||.... . +++|++
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~ 159 (361)
T 1kew_A 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence 998742 23667787776 445 9999999999986532 1 678888
Q ss_pred CCCCCCcc-hhhhhHHHHHhh----cCCcEEEEccceeeCCCCC-CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 122 TVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 122 ~~~~~~~~-~~k~~~e~~~~~----~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+..|.+.| .+|..+|.+++. .+++++++||+++|||... ..++..++..+.+++++.+++++.+.++|+|++
T Consensus 160 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 237 (361)
T 1kew_A 160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237 (361)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHH
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHH
Confidence 77777888 999999998754 5899999999999999754 346677788888888888888889999998764
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.3e-27 Score=179.99 Aligned_cols=177 Identities=20% Similarity=0.233 Sum_probs=140.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||++|++++++|+++|++|++++|++......+.. ..+++++.+|+.|++++.++++..++|+|||+|
T Consensus 27 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~---------~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A 97 (333)
T 2q1w_A 27 TGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD---------HPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA 97 (333)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred eCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh---------cCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence 79999999999999999999999999986542222211 146889999999999999999844599999999
Q ss_pred CCCc-------------cchHHHHHhCC--CCCcEEEEecceecc----cCCCCCCCCCCCCCCC-Ccc-hhhhhHHHHH
Q 029198 81 GREA-------------DEVEPILDALP--NLEQFIYCSSAGVYL----KSDLLPHCETDTVDPK-SRH-KGKLNTESVL 139 (197)
Q Consensus 81 ~~~~-------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg----~~~~~~~~e~~~~~~~-~~~-~~k~~~e~~~ 139 (197)
+... .++.++++++. ++++||++||..+|+ .... +++|++ .|. +.| .+|..+|.++
T Consensus 98 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~Y~~sK~~~E~~~ 174 (333)
T 2q1w_A 98 ASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSSYAISKSANEDYL 174 (333)
T ss_dssp CCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCHHHHHHHHHHHHH
T ss_pred eecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCchHHHHHHHHHHH
Confidence 8643 23667888887 778999999999998 5444 677776 566 677 9999999999
Q ss_pred hh-cCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 140 ES-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 140 ~~-~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+. .. +++++||+++|||+....+++.+++.+.+++ .+++ +++.++|+|++
T Consensus 175 ~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~ 225 (333)
T 2q1w_A 175 EYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVK 225 (333)
T ss_dssp HHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHH
T ss_pred HhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHH
Confidence 88 66 9999999999999744456777777777776 3455 67788887754
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.1e-27 Score=183.01 Aligned_cols=192 Identities=17% Similarity=0.157 Sum_probs=144.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccC-CCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||||+||++++++|+++|++|++++|++..... .+.... ..... ...+++++.+|+.|++++.++++..++|+|||
T Consensus 30 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 108 (375)
T 1t2a_A 30 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLY-KNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYN 108 (375)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHh-hhhccccCCCceEEEccCCCHHHHHHHHHhcCCCEEEE
Confidence 7999999999999999999999999998654211 110000 00000 12468899999999999999998667899999
Q ss_pred ccCCCc----------------cchHHHHHhCC--CC---CcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHH
Q 029198 79 INGREA----------------DEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE 136 (197)
Q Consensus 79 ~a~~~~----------------~~~~~ll~~~~--~~---~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e 136 (197)
+|+... .++.++++++. ++ ++||++||..+|+.....+++|+++..|.+.| .+|..+|
T Consensus 109 ~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e 188 (375)
T 1t2a_A 109 LGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAY 188 (375)
T ss_dssp CCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred CCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHH
Confidence 998642 23567888877 55 79999999999997766788999888888888 9999999
Q ss_pred HHHhh----cCCcEEEEccceeeCCCCCCCh----HHHHHHHHHcCC-CcccCCCCceeEEEEEEE
Q 029198 137 SVLES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGR-PIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 137 ~~~~~----~~~~~~i~r~~~i~g~~~~~~~----~~~~~~~~~~~~-~~~~~~~g~~~~~~i~v~ 193 (197)
.+++. .+++++++||+++|||+....+ +..++..+..++ +...++++++.++|+||+
T Consensus 189 ~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~ 254 (375)
T 1t2a_A 189 WIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAK 254 (375)
T ss_dssp HHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHH
T ss_pred HHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHH
Confidence 98753 5899999999999999754433 234555566665 334568889999998764
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=183.70 Aligned_cols=179 Identities=16% Similarity=0.201 Sum_probs=146.1
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCcc-CCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc---CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~---~~d~ 75 (197)
||||||||++++++|+++| ++|++++|++.... ..+ .++. +.+|+.|.+.+.++++.. ++|+
T Consensus 52 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~------------~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~ 118 (357)
T 2x6t_A 52 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL------------VDLN-IADYMDKEDFLIQIMAGEEFGDVEA 118 (357)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGT------------TTSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcc------------cCce-EeeecCcHHHHHHHHhhcccCCCCE
Confidence 7999999999999999999 99999999865421 111 1233 678999999999888732 5999
Q ss_pred EEeccCCCc--------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHH
Q 029198 76 VYDINGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV 138 (197)
Q Consensus 76 vi~~a~~~~--------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~ 138 (197)
|||+|+... .++.+++++++ ++ +||++||..+|+.....+++|+++..|.+.| .+|..+|.+
T Consensus 119 Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~ 197 (357)
T 2x6t_A 119 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEY 197 (357)
T ss_dssp EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred EEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHH
Confidence 999998642 23678888887 77 9999999999998776688999888888888 999999998
Q ss_pred Hhh----cCCcEEEEccceeeCCCCC-----CChHHHHHHHHHcCCCcccCCCCce-eEEEEEEE
Q 029198 139 LES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVK 193 (197)
Q Consensus 139 ~~~----~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~i~v~ 193 (197)
++. .+++++++||+++|||+.. ..++..++..+.+++++.+++++++ .++|+|++
T Consensus 198 ~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 262 (357)
T 2x6t_A 198 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVG 262 (357)
T ss_dssp HHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHH
T ss_pred HHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHH
Confidence 743 4799999999999999753 3567778888888988888888888 89997764
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-26 Score=179.65 Aligned_cols=188 Identities=23% Similarity=0.300 Sum_probs=139.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
||||||||++++++|+++|++|++++|........+ ..+.. ...++.++.+|+.|++++.++++..++|+|||+
T Consensus 6 TGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~ 80 (338)
T 1udb_A 6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVL-----PVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHH-----HHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHH-----HHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence 799999999999999999999999988543311100 01111 124678999999999999999875579999999
Q ss_pred cCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCC-CCcc-hhhhhHHHHH
Q 029198 80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-KGKLNTESVL 139 (197)
Q Consensus 80 a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~~-~~k~~~e~~~ 139 (197)
|+... .++.+++++++ ++++||++||..+|+.....+++|+.+..| .+.| .+|..+|.++
T Consensus 81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~ 160 (338)
T 1udb_A 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence 98632 23567888877 788999999999999776667888777655 5667 9999999987
Q ss_pred hh----c-CCcEEEEccceeeCCCC-----------CCChHHHHHHHHH-cCCCcccCC------CCceeEEEEEEE
Q 029198 140 ES----K-GVNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVK 193 (197)
Q Consensus 140 ~~----~-~~~~~i~r~~~i~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~g~~~~~~i~v~ 193 (197)
+. . +++++++||+++||+.. ...++..+...+. .++++.+++ +|.+.++|+||+
T Consensus 161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 237 (338)
T 1udb_A 161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_dssp HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH
T ss_pred HHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHH
Confidence 53 3 79999999999999831 1234555555544 344454443 567889998764
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=182.57 Aligned_cols=168 Identities=21% Similarity=0.328 Sum_probs=137.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++++++|+++|++|++++|+. .+|+.|.+++.++++..++|+|||+|
T Consensus 9 tGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------------~~D~~d~~~~~~~~~~~~~d~vih~a 63 (321)
T 1e6u_A 9 AGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDSRAVHDFFASERIDQVYLAA 63 (321)
T ss_dssp ETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------------cCCccCHHHHHHHHHhcCCCEEEEcC
Confidence 79999999999999999999999988742 26899999999998766899999999
Q ss_pred CCCc-----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCC----CCCCC-Ccc-hhhhhH
Q 029198 81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPK-SRH-KGKLNT 135 (197)
Q Consensus 81 ~~~~-----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~----~~~~~-~~~-~~k~~~ 135 (197)
+... .++.+++++++ ++++||++||..+|+.....+++|++ +..|. +.| .+|..+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~ 143 (321)
T 1e6u_A 64 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG 143 (321)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred eecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHH
Confidence 8752 23667888887 78899999999999987677788876 44553 367 999999
Q ss_pred HHHHhh----cCCcEEEEccceeeCCCCC-----CChHHHHHHHHHc----C-CCcccCCCCceeEEEEEEE
Q 029198 136 ESVLES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA----G-RPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 136 e~~~~~----~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~----~-~~~~~~~~g~~~~~~i~v~ 193 (197)
|.+++. .+++++++||+++|||+.. ..++..++..+.+ | +++.+++++++.++|+|++
T Consensus 144 E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~ 215 (321)
T 1e6u_A 144 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVD 215 (321)
T ss_dssp HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHH
T ss_pred HHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHH
Confidence 998754 5899999999999999753 2566777776654 4 5777788889999998865
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=177.91 Aligned_cols=176 Identities=16% Similarity=0.119 Sum_probs=138.2
Q ss_pred CCcccchHHHHHHHHHHC--CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
||||||+|++++++|+++ |++|++++|+.... .++.++.+|+.|++++.++++..++|+|||
T Consensus 5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih 68 (317)
T 3ajr_A 5 TGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----------------GGIKFITLDVSNRDEIDRAVEKYSIDAIFH 68 (317)
T ss_dssp ESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----------------TTCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred EcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----------------cCceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence 799999999999999999 89999999976541 146788999999999999987668999999
Q ss_pred ccCCCc---------------cchHHHHHhCC--CCCcEEEEecceecccC-CCCCCCCCCCCCCCCcc-hhhhhHHHHH
Q 029198 79 INGREA---------------DEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTESVL 139 (197)
Q Consensus 79 ~a~~~~---------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~-~~~~~~e~~~~~~~~~~-~~k~~~e~~~ 139 (197)
+|+... .++.+++++++ ++++||++||..+|+.. ...+..|+.+..|.+.| .+|..+|.++
T Consensus 69 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~ 148 (317)
T 3ajr_A 69 LAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLG 148 (317)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHH
T ss_pred CCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHH
Confidence 998642 23678888887 78899999999999864 33466777777788888 9999999876
Q ss_pred h----hcCCcEEEEccceeeCCCCCC-----C-hHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 140 E----SKGVNWTSLRPVYIYGPLNYN-----P-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 140 ~----~~~~~~~i~r~~~i~g~~~~~-----~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+ +.+++++++||+++||+.... . +...+.+. ..+.++..++++++.++|+|++
T Consensus 149 ~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~ 211 (317)
T 3ajr_A 149 QYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYA-VKREKYKCYLAPNRALPMMYMP 211 (317)
T ss_dssp HHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHH-HTTCCEEECSCTTCCEEEEEHH
T ss_pred HHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHH-HhCCCceeecCccceeeeeEHH
Confidence 4 468999999999999974211 2 23333333 4444555667788889998764
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.6e-28 Score=183.16 Aligned_cols=167 Identities=20% Similarity=0.201 Sum_probs=135.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||| ||+|++++++|+++|++|++++|++.+.... . ..+++++.+|+.|.+ +. ++|+|||+|
T Consensus 11 tGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~--~~~~~~~~~D~~d~~-----~~--~~d~vi~~a 71 (286)
T 3ius_A 11 FGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAI---------R--ASGAEPLLWPGEEPS-----LD--GVTHLLIST 71 (286)
T ss_dssp ETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHH---------H--HTTEEEEESSSSCCC-----CT--TCCEEEECC
T ss_pred ECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhH---------h--hCCCeEEEecccccc-----cC--CCCEEEECC
Confidence 698 9999999999999999999999986552110 1 257899999999954 44 899999999
Q ss_pred CCCcc---chHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhc-CCcEEEEcc
Q 029198 81 GREAD---EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK-GVNWTSLRP 151 (197)
Q Consensus 81 ~~~~~---~~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~-~~~~~i~r~ 151 (197)
+.... .+++++++++ ++++||++||.++||.....+++|+++..|.+.| .+|+.+|+++++. +++++++||
T Consensus 72 ~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp 151 (286)
T 3ius_A 72 APDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRL 151 (286)
T ss_dssp CCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred CccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEec
Confidence 87533 3577888775 5689999999999998887789999999998888 9999999999887 999999999
Q ss_pred ceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+++||++... +..+.+++...++++ ++.++|+|++
T Consensus 152 ~~v~G~~~~~------~~~~~~~~~~~~~~~-~~~~~~i~v~ 186 (286)
T 3ius_A 152 AGIYGPGRGP------FSKLGKGGIRRIIKP-GQVFSRIHVE 186 (286)
T ss_dssp CEEEBTTBSS------STTSSSSCCCEEECT-TCCBCEEEHH
T ss_pred cceECCCchH------HHHHhcCCccccCCC-CcccceEEHH
Confidence 9999996422 233456776666655 5778887764
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=8e-27 Score=182.35 Aligned_cols=192 Identities=20% Similarity=0.177 Sum_probs=142.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCcc-CCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||+||++++++|+++|++|++++|++.... ..+.... ........+++++.+|+.|.+++.++++..++|+|||+
T Consensus 7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 85 (372)
T 1db3_A 7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIY-QDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNL 85 (372)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEEC
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHh-hccccCCCceEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 799999999999999999999999999865421 1111000 00000124688999999999999999986578999999
Q ss_pred cCCCc----------------cchHHHHHhCC--CC---CcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHH
Q 029198 80 NGREA----------------DEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES 137 (197)
Q Consensus 80 a~~~~----------------~~~~~ll~~~~--~~---~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~ 137 (197)
|+... .++.+++++++ ++ ++||++||..+|+.....+++|+++..|.+.| .+|..+|.
T Consensus 86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~ 165 (372)
T 1db3_A 86 GAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYW 165 (372)
T ss_dssp CCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred CcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHH
Confidence 98632 23667888877 55 79999999999997766688898888888888 99999998
Q ss_pred HHh----hcCCcEEEEccceeeCCCCCCCh----HHHHHHHHHcCCC-cccCCCCceeEEEEEEE
Q 029198 138 VLE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 138 ~~~----~~~~~~~i~r~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~g~~~~~~i~v~ 193 (197)
+++ +.+++++++|++.+|||+....+ +..++..+.+++. ...++++++.++|+||+
T Consensus 166 ~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~ 230 (372)
T 1db3_A 166 ITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK 230 (372)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred HHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHH
Confidence 874 35899999999999999754333 3445566667763 44568889999998865
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-27 Score=177.39 Aligned_cols=162 Identities=19% Similarity=0.155 Sum_probs=137.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++++++|+++|++|++++|+ .+|+.|++++.++++..++|+|||+|
T Consensus 18 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~Dl~d~~~~~~~~~~~~~d~vih~A 71 (292)
T 1vl0_A 18 TGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------------DLDITNVLAVNKFFNEKKPNVVINCA 71 (292)
T ss_dssp ESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCChHHHHHHHHHHhCCCeEEeccCc--------------------------cCCCCCHHHHHHHHHhcCCCEEEECC
Confidence 7999999999999999999999999985 26889999999998755799999999
Q ss_pred CCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhh
Q 029198 81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~ 141 (197)
+... .++.+++++++ +. +||++||..+|+.....+++|+++..|.+.| .+|..+|.+++.
T Consensus 72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~ 150 (292)
T 1vl0_A 72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA 150 (292)
T ss_dssp CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 8642 23678888887 66 9999999999998776788999988888888 999999999998
Q ss_pred cCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 142 ~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
...+++++||+++||+ . ..++..++..+..++++.+++ ++.++|+|++
T Consensus 151 ~~~~~~~lR~~~v~G~-~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~ 198 (292)
T 1vl0_A 151 LNPKYYIVRTAWLYGD-G-NNFVKTMINLGKTHDELKVVH--DQVGTPTSTV 198 (292)
T ss_dssp HCSSEEEEEECSEESS-S-SCHHHHHHHHHHHCSEEEEES--SCEECCEEHH
T ss_pred hCCCeEEEeeeeeeCC-C-cChHHHHHHHHhcCCcEEeec--CeeeCCccHH
Confidence 8889999999999999 3 466777778888888776655 4678887653
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-26 Score=180.41 Aligned_cols=191 Identities=15% Similarity=0.142 Sum_probs=143.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccC-CCCCCCchhhhhccC-ceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
||||||||++++++|+++|++|++++|+...... .+.... ........ ++.++.+|+.|.+++.++++..++|+|||
T Consensus 34 tGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 112 (381)
T 1n7h_A 34 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIY-IDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYN 112 (381)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred EcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhh-hccccccccceEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 7999999999999999999999999998664211 111100 00000112 68899999999999999998656899999
Q ss_pred ccCCCc----------------cchHHHHHhCC--CCC-----cEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhh
Q 029198 79 INGREA----------------DEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN 134 (197)
Q Consensus 79 ~a~~~~----------------~~~~~ll~~~~--~~~-----~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~ 134 (197)
+|+... .++.++++++. +++ +||++||..+||.... +++|+++..|.+.| .+|..
T Consensus 113 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~~~Y~~sK~~ 191 (381)
T 1n7h_A 113 LAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCA 191 (381)
T ss_dssp CCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCCSHHHHHHHH
T ss_pred CCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCCCchHHHHHH
Confidence 998642 23677888877 444 9999999999997766 88898888888888 99999
Q ss_pred HHHHHhh----cCCcEEEEccceeeCCCCCCCh----HHHHHHHHHcCCC-cccCCCCceeEEEEEEE
Q 029198 135 TESVLES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 135 ~e~~~~~----~~~~~~i~r~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~g~~~~~~i~v~ 193 (197)
+|.+++. .+++++++|++++|||+....+ +..++..+.+++. ...++++++.++|+|++
T Consensus 192 ~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~ 259 (381)
T 1n7h_A 192 AHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAG 259 (381)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHH
T ss_pred HHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHH
Confidence 9998753 4899999999999999754433 2344555566653 33457888999998764
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-26 Score=176.36 Aligned_cols=186 Identities=19% Similarity=0.181 Sum_probs=144.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh--ccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||||+||++++++|+++|++|++++|++..... ..+.. ...+++++.+|+.|++++.++++..++|+|||
T Consensus 9 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 81 (345)
T 2z1m_A 9 TGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS-------WRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN 81 (345)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT-------HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEECCCccccc-------ccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 7999999999999999999999999998765211 01111 12468899999999999999998667899999
Q ss_pred ccCCCc----------------cchHHHHHhCC--CC-CcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHH
Q 029198 79 INGREA----------------DEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV 138 (197)
Q Consensus 79 ~a~~~~----------------~~~~~ll~~~~--~~-~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~ 138 (197)
+|+... .++.++++++. ++ ++||++||..+||.....+++|+.+..|.+.| .+|..+|.+
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~ 161 (345)
T 2z1m_A 82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWI 161 (345)
T ss_dssp CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHH
Confidence 998642 23677888877 65 89999999999998777788888888888888 999999998
Q ss_pred Hhh----cCCcEEEEccceeeCCCCCCChH----HHHHHHHHcCCCc-ccCCCCceeEEEEEEE
Q 029198 139 LES----KGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRPI-PIPGSGIQVTQLGHVK 193 (197)
Q Consensus 139 ~~~----~~~~~~i~r~~~i~g~~~~~~~~----~~~~~~~~~~~~~-~~~~~g~~~~~~i~v~ 193 (197)
++. .+++++++|+.++|||+...... ..++..+..++.. ..++++.+.++|+|++
T Consensus 162 ~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 225 (345)
T 2z1m_A 162 TVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAP 225 (345)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHH
T ss_pred HHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHH
Confidence 743 58999999999999997543332 2334455566533 3467788888997764
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-27 Score=180.43 Aligned_cols=170 Identities=18% Similarity=0.175 Sum_probs=123.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||++|++++++|+++|++|++++|+++. ++ ++.+|+.|++++.++++..++|+|||+|
T Consensus 8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A 68 (315)
T 2ydy_A 8 TGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA 68 (315)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------------CHHHHHHHCCSEEEECC
T ss_pred ECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------------CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence 7999999999999999999999999986543 12 6789999999999998855699999999
Q ss_pred CCC----------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhh
Q 029198 81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~ 141 (197)
+.. ..++.++++++. +. +||++||..+|+. ...+++|+++..|.+.| .+|..+|.+++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~ 146 (315)
T 2ydy_A 69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLE 146 (315)
T ss_dssp -------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 863 234678888887 65 9999999999987 45678898888888888 999999999999
Q ss_pred cCCcEEEEccceeeCCCCCC--ChHHHHHHHHH-cCCCcccCCCCceeEEEEEEE
Q 029198 142 KGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 142 ~~~~~~i~r~~~i~g~~~~~--~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+++++++||+++||+.... .++..++..+. .++++.+. +++.++|+|++
T Consensus 147 ~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~ 199 (315)
T 2ydy_A 147 NNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVK 199 (315)
T ss_dssp HCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHH
T ss_pred hCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHH
Confidence 89999999999999986431 45556667776 77766554 35677887654
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-26 Score=191.23 Aligned_cols=180 Identities=21% Similarity=0.249 Sum_probs=145.1
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHH-HHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-l~~~~~~~~~d~vi~ 78 (197)
||||||+|++++++|+++ |++|++++|++........ ..+++++.+|+.|.++ +.++++ ++|+|||
T Consensus 321 TGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~v~~Dl~d~~~~~~~~~~--~~D~Vih 388 (660)
T 1z7e_A 321 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP 388 (660)
T ss_dssp ETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT----------CTTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred EcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc----------CCceEEEECCCCCcHHHHHHhhc--CCCEEEE
Confidence 799999999999999998 8999999998765322111 2578999999999764 777887 8999999
Q ss_pred ccCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCC-------CCCCcc-hhh
Q 029198 79 INGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK 132 (197)
Q Consensus 79 ~a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~-------~~~~~~-~~k 132 (197)
+|+... .++.+++++++ + ++||++||..+|+.....+++|+++. .|.+.| .+|
T Consensus 389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK 467 (660)
T 1z7e_A 389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK 467 (660)
T ss_dssp CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHH
Confidence 998642 24677888887 6 89999999999997766677777642 334457 899
Q ss_pred hhHHHHHh----hcCCcEEEEccceeeCCCCC---------CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 133 LNTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 133 ~~~e~~~~----~~~~~~~i~r~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
..+|.+++ +.+++++++||+++||++.. ..++..++..+.+++++.+++++++.++|+|++
T Consensus 468 ~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~ 541 (660)
T 1z7e_A 468 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIR 541 (660)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHH
Confidence 99999874 46899999999999999743 346677888888899888888888999998764
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.4e-27 Score=170.66 Aligned_cols=145 Identities=20% Similarity=0.213 Sum_probs=119.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||++|++++++|+++|++|++++|++++.... ..+++++.+|+.|++++.++++ ++|+|||++
T Consensus 10 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a 75 (227)
T 3dhn_A 10 IGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE------------NEHLKVKKADVSSLDEVCEVCK--GADAVISAF 75 (227)
T ss_dssp ETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC------------CTTEEEECCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred EcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc------------cCceEEEEecCCCHHHHHHHhc--CCCEEEEeC
Confidence 69999999999999999999999999987653221 2579999999999999999999 899999999
Q ss_pred CCC----------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHH---h-hcC
Q 029198 81 GRE----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL---E-SKG 143 (197)
Q Consensus 81 ~~~----------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~---~-~~~ 143 (197)
+.. ..++.+++++++ ++++||++||.++|+.... ...++.+..|.+.| .+|...|.++ . +.+
T Consensus 76 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~-~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~ 154 (227)
T 3dhn_A 76 NPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPG-LRLMDSGEVPENILPGVKALGEFYLNFLMKEKE 154 (227)
T ss_dssp CC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETT-EEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCS
T ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCC-CccccCCcchHHHHHHHHHHHHHHHHHHhhccC
Confidence 874 345788999988 7889999999987764433 23445566677788 9999999544 3 578
Q ss_pred CcEEEEccceeeCCCCC
Q 029198 144 VNWTSLRPVYIYGPLNY 160 (197)
Q Consensus 144 ~~~~i~r~~~i~g~~~~ 160 (197)
++++++||+++||++..
T Consensus 155 ~~~~ilrp~~v~g~~~~ 171 (227)
T 3dhn_A 155 IDWVFFSPAADMRPGVR 171 (227)
T ss_dssp SEEEEEECCSEEESCCC
T ss_pred ccEEEEeCCcccCCCcc
Confidence 99999999999999753
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.7e-26 Score=174.86 Aligned_cols=179 Identities=21% Similarity=0.306 Sum_probs=138.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++++++|+++|++|++++|........+. .+. ...++.++.+|+.+.. +. ++|+|||+|
T Consensus 33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~D~~~~~-----~~--~~d~vih~A 99 (343)
T 2b69_A 33 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-----HWI-GHENFELINHDVVEPL-----YI--EVDQIYHLA 99 (343)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG-----GGT-TCTTEEEEECCTTSCC-----CC--CCSEEEECC
T ss_pred EcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhh-----hhc-cCCceEEEeCccCChh-----hc--CCCEEEECc
Confidence 7999999999999999999999999997543221111 010 1246889999998753 44 899999999
Q ss_pred CCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCC-----CCCCCCcc-hhhhhHH
Q 029198 81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTE 136 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~-----~~~~~~~~-~~k~~~e 136 (197)
+... .++.+++++++ +. ++|++||..+|+.....+++|+. +..|.+.| .+|..+|
T Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E 178 (343)
T 2b69_A 100 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE 178 (343)
T ss_dssp SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHH
T ss_pred cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHH
Confidence 8642 13667888887 64 99999999999977666777763 44455567 9999999
Q ss_pred HHHh----hcCCcEEEEccceeeCCCCC---CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 137 SVLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 137 ~~~~----~~~~~~~i~r~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+++ +.+++++++||+++|||+.. ..++..++..+.+++++.+++++++.++|+|++
T Consensus 179 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 242 (343)
T 2b69_A 179 TMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVS 242 (343)
T ss_dssp HHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHH
T ss_pred HHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHH
Confidence 9864 46899999999999999743 356777888888888888888899999998764
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=173.99 Aligned_cols=181 Identities=17% Similarity=0.150 Sum_probs=144.2
Q ss_pred CCcccchHHHHHHHHHHCC-------CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCc
Q 029198 1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~ 73 (197)
||||||||++++++|+++| ++|++++|+.+..... ...++.++.+|+.|++++.++++ .++
T Consensus 20 tGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~-----------~~~~~~~~~~Dl~d~~~~~~~~~-~~~ 87 (342)
T 2hrz_A 20 IGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAG-----------FSGAVDARAADLSAPGEAEKLVE-ARP 87 (342)
T ss_dssp ETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTT-----------CCSEEEEEECCTTSTTHHHHHHH-TCC
T ss_pred ECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccc-----------cCCceeEEEcCCCCHHHHHHHHh-cCC
Confidence 7999999999999999999 8999999986542210 12578899999999999998884 289
Q ss_pred cEEEeccCCCc---------------cchHHHHHhCC--C-----CCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 74 DVVYDINGREA---------------DEVEPILDALP--N-----LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 74 d~vi~~a~~~~---------------~~~~~ll~~~~--~-----~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
|+|||+|+... .++.+++++++ + +++||++||..+|+.....+++|+++..|.+.| .
T Consensus 88 d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~ 167 (342)
T 2hrz_A 88 DVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGT 167 (342)
T ss_dssp SEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHH
T ss_pred CEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHH
Confidence 99999998642 23677888877 5 789999999999997655688999988888888 9
Q ss_pred hhhhHHHHHhh----cCCcEEEEccceeeC-CCCC----CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 131 GKLNTESVLES----KGVNWTSLRPVYIYG-PLNY----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 131 ~k~~~e~~~~~----~~~~~~i~r~~~i~g-~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+|..+|.++++ .+++++++|++++|| |+.. ..++..++..+.++++..++++++...+++|++
T Consensus 168 sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (342)
T 2hrz_A 168 QKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPR 239 (342)
T ss_dssp HHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHH
T ss_pred HHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehH
Confidence 99999998753 478999999999998 6532 235666777788888776666666667776543
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-26 Score=178.83 Aligned_cols=185 Identities=14% Similarity=0.084 Sum_probs=137.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEE-eecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
||||||+|++++++|+++|++|++++|+........ ..+.. ...+++++ .+|+.|.+++.++++ ++|+|||
T Consensus 17 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih 89 (342)
T 1y1p_A 17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ-----KRWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAH 89 (342)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEE
T ss_pred ECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHH-----HHhhccCCCceEEEEecCCcChHHHHHHHc--CCCEEEE
Confidence 799999999999999999999999999754321000 00000 01468888 899999999999988 8999999
Q ss_pred ccCCCc-------------cchHHHHHhCC---CCCcEEEEecceecccCCC----CCCCCCCC----------------
Q 029198 79 INGREA-------------DEVEPILDALP---NLEQFIYCSSAGVYLKSDL----LPHCETDT---------------- 122 (197)
Q Consensus 79 ~a~~~~-------------~~~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~----~~~~e~~~---------------- 122 (197)
+|+... .++.++++++. ++++||++||..+|+.... .+++|++.
T Consensus 90 ~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~ 169 (342)
T 1y1p_A 90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP 169 (342)
T ss_dssp CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred eCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccccc
Confidence 998642 34677888874 5789999999999864321 45667652
Q ss_pred CCCCCcc-hhhhhHHHHHhhc------CCcEEEEccceeeCCCCCC----ChHHHHHHHHHcCCCcccCCCCceeEEEEE
Q 029198 123 VDPKSRH-KGKLNTESVLESK------GVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGH 191 (197)
Q Consensus 123 ~~~~~~~-~~k~~~e~~~~~~------~~~~~i~r~~~i~g~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 191 (197)
..|.+.| .+|..+|.+++.. +++++++||+++||+.... ..+..++..+.++++..+++++ +.++|+|
T Consensus 170 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~ 248 (342)
T 1y1p_A 170 QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQYYVS 248 (342)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSEEEEE
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcCCEeE
Confidence 2234557 9999999987432 7899999999999997432 2677788888888887766655 6688877
Q ss_pred EE
Q 029198 192 VK 193 (197)
Q Consensus 192 v~ 193 (197)
++
T Consensus 249 v~ 250 (342)
T 1y1p_A 249 AV 250 (342)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-25 Score=184.24 Aligned_cols=188 Identities=20% Similarity=0.249 Sum_probs=141.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||+||++++++|+++|++|++++|......... ..+.. ...+++++.+|+.|++++.++++..++|+|||+
T Consensus 17 TGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~ 91 (699)
T 1z45_A 17 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSV-----ARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF 91 (699)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHH-----HHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred ECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHH-----HHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEEC
Confidence 799999999999999999999999999765421100 01110 125688999999999999999886689999999
Q ss_pred cCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCC----CCCCCCCCCCCCCCcc-hhhhhHH
Q 029198 80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD----LLPHCETDTVDPKSRH-KGKLNTE 136 (197)
Q Consensus 80 a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~----~~~~~e~~~~~~~~~~-~~k~~~e 136 (197)
|+... .++.+++++++ ++++||++||..+|+... ..+.+|+.+..|.+.| .+|..+|
T Consensus 92 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E 171 (699)
T 1z45_A 92 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE 171 (699)
T ss_dssp CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred CcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHH
Confidence 98642 23567888887 789999999999998542 2467787777777788 9999999
Q ss_pred HHHhh------cCCcEEEEccceeeCCCCC-----------CChHHHHHHHHH-cCCCcccCC------CCceeEEEEEE
Q 029198 137 SVLES------KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHV 192 (197)
Q Consensus 137 ~~~~~------~~~~~~i~r~~~i~g~~~~-----------~~~~~~~~~~~~-~~~~~~~~~------~g~~~~~~i~v 192 (197)
.+++. .+++++++||+++||+... ..++..+...+. .++++.+++ ++++.++|+||
T Consensus 172 ~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v 251 (699)
T 1z45_A 172 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV 251 (699)
T ss_dssp HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred HHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEH
Confidence 98754 5899999999999998521 234454444443 234666666 67889999876
Q ss_pred E
Q 029198 193 K 193 (197)
Q Consensus 193 ~ 193 (197)
+
T Consensus 252 ~ 252 (699)
T 1z45_A 252 V 252 (699)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.3e-25 Score=167.40 Aligned_cols=164 Identities=22% Similarity=0.256 Sum_probs=123.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|+++||+|++++|++.. ..+. .| +...+.++ ++|+|||+|
T Consensus 6 TGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----------------~~~~---~~----~~~~~~l~--~~d~vihla 59 (298)
T 4b4o_A 6 GGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----------------GRIT---WD----ELAASGLP--SCDAAVNLA 59 (298)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------------TEEE---HH----HHHHHCCC--SCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----------------Ceee---cc----hhhHhhcc--CCCEEEEec
Confidence 7999999999999999999999999997654 1111 11 22334455 899999999
Q ss_pred CCCc--------------------cchHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhH
Q 029198 81 GREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT 135 (197)
Q Consensus 81 ~~~~--------------------~~~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~ 135 (197)
+..+ .++++++++++ +..++|+.||.++||.....+.+|+++..+.+++ ..+...
T Consensus 60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~ 139 (298)
T 4b4o_A 60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKW 139 (298)
T ss_dssp CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHH
T ss_pred cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHH
Confidence 7532 12566777655 4556899999999999888899999988877766 444444
Q ss_pred HH--HHhhcCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 136 ES--VLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 136 e~--~~~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
|. .....+++++++||+.+|||+. .....+......+... .+++++++++||||+
T Consensus 140 e~~~~~~~~~~~~~~~r~~~v~g~~~--~~~~~~~~~~~~~~~~-~~g~g~~~~~~ihv~ 196 (298)
T 4b4o_A 140 EAAARLPGDSTRQVVVRSGVVLGRGG--GAMGHMLLPFRLGLGG-PIGSGHQFFPWIHIG 196 (298)
T ss_dssp HHHHCCSSSSSEEEEEEECEEECTTS--HHHHHHHHHHHTTCCC-CBTTSCSBCCEEEHH
T ss_pred HHHHHhhccCCceeeeeeeeEEcCCC--CchhHHHHHHhcCCcc-eecccCceeecCcHH
Confidence 43 3456789999999999999953 4556666666666644 458999999998875
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.3e-25 Score=178.01 Aligned_cols=191 Identities=16% Similarity=0.164 Sum_probs=137.2
Q ss_pred CCcccchHHHHHHHHHHC---CCeEEEEecCCCCccC------CCCCCCc---hhh-hhccCceEEEeecCC------CH
Q 029198 1 MGGTRFIGVFLSRLLVKE---GHQVTLFTRGKAPIAQ------QLPGESD---QEF-AEFSSKILHLKGDRK------DY 61 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~---g~~V~~~~r~~~~~~~------~~~~~~~---~~~-~~~~~~~~~~~~d~~------~~ 61 (197)
|||||+||++++++|++. |++|++++|++..... .+..... ..+ .....+++++.+|+. |.
T Consensus 79 TGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gld~ 158 (478)
T 4dqv_A 79 TGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQ 158 (478)
T ss_dssp ECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGCCH
T ss_pred ECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCCCH
Confidence 799999999999999999 8999999998764210 0000000 000 011257999999998 67
Q ss_pred HHHHhhhhccCccEEEeccCCC------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 62 DFVKSSLSAKGFDVVYDINGRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 62 ~~l~~~~~~~~~d~vi~~a~~~------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+.+.++++ ++|+|||+|+.. +.++.+++++++ ++++||++||..+|+.....+++|+....|.+
T Consensus 159 ~~~~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~ 236 (478)
T 4dqv_A 159 PMWRRLAE--TVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVIS 236 (478)
T ss_dssp HHHHHHHH--HCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHC
T ss_pred HHHHHHHc--CCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCcccccccC
Confidence 78999998 899999999873 235788999988 78899999999999987777788877654433
Q ss_pred c-----------c-hhhhhHHHHHhh----cCCcEEEEccceeeCCCC------CCChHHHHHHHHHc-CC-CcccCC--
Q 029198 128 R-----------H-KGKLNTESVLES----KGVNWTSLRPVYIYGPLN------YNPVEEWFFHRLKA-GR-PIPIPG-- 181 (197)
Q Consensus 128 ~-----------~-~~k~~~e~~~~~----~~~~~~i~r~~~i~g~~~------~~~~~~~~~~~~~~-~~-~~~~~~-- 181 (197)
+ | .+|+.+|.++++ .+++++++||++|||+.. ...++..++..... |. +..+++
T Consensus 237 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~ 316 (478)
T 4dqv_A 237 PTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPD 316 (478)
T ss_dssp CEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCC
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccc
Confidence 2 7 999999998754 599999999999999742 12345555554433 32 111111
Q ss_pred -C---CceeEEEEEEE
Q 029198 182 -S---GIQVTQLGHVK 193 (197)
Q Consensus 182 -~---g~~~~~~i~v~ 193 (197)
+ +++.++|+||+
T Consensus 317 ~~G~~~~~~~~~v~vd 332 (478)
T 4dqv_A 317 SEGNRQRAHFDGLPVT 332 (478)
T ss_dssp TTSCCCCCCCCEEEHH
T ss_pred cccccccceeeeeeHH
Confidence 1 25678898775
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-25 Score=180.23 Aligned_cols=188 Identities=18% Similarity=0.180 Sum_probs=138.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccC--CCC----CCCch-hhhhccCceEEEeecCCCHHHHHhhhhccCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLP----GESDQ-EFAEFSSKILHLKGDRKDYDFVKSSLSAKGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~----~~~~~-~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~ 73 (197)
||||||+|++|+++|++.|++|++++|++..... .+. ..... .......+++++.+|+.+++.+. +.. ++
T Consensus 156 TGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~--~~ 232 (508)
T 4f6l_B 156 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE--NM 232 (508)
T ss_dssp SCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-CSS--CC
T ss_pred ECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-Ccc--CC
Confidence 7999999999999999999999999998773110 000 00000 00112368999999999977777 444 99
Q ss_pred cEEEeccCCC-------------ccchHHHHHhCC-CCCcEEEEecceeccc-----CCCCCCCCCCC---CCCCCcc-h
Q 029198 74 DVVYDINGRE-------------ADEVEPILDALP-NLEQFIYCSSAGVYLK-----SDLLPHCETDT---VDPKSRH-K 130 (197)
Q Consensus 74 d~vi~~a~~~-------------~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~-----~~~~~~~e~~~---~~~~~~~-~ 130 (197)
|+|||+|+.. +.++.+++++++ +.++||++||..+ |. ....+++|+++ ..+.+.| .
T Consensus 233 D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~ 311 (508)
T 4f6l_B 233 DTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTR 311 (508)
T ss_dssp SEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCCCSHHHH
T ss_pred CEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCcccccccccccccCCCcHHH
Confidence 9999999863 235788999888 7899999999998 42 23456777776 3355668 9
Q ss_pred hhhhHHHHHhh---cCCcEEEEccceeeCCCCCC--------ChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 131 GKLNTESVLES---KGVNWTSLRPVYIYGPLNYN--------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 131 ~k~~~e~~~~~---~~~~~~i~r~~~i~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+|+.+|.++++ .|++++++||+++||+.... ..+..+++.+..+..++. +++++.++|+||+
T Consensus 312 sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v~v~ 384 (508)
T 4f6l_B 312 SKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVD 384 (508)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECEEHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEEcHH
Confidence 99999998865 79999999999999996432 235667777777776654 4468889998765
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.6e-25 Score=160.68 Aligned_cols=139 Identities=16% Similarity=0.158 Sum_probs=117.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|+++|++|++++|++++.... .+++++.+|+.| ++++.++++ ++|+|||+
T Consensus 6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~ 70 (219)
T 3dqp_A 6 VGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-------------NNVKAVHFDVDWTPEEMAKQLH--GMDAIINV 70 (219)
T ss_dssp ESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-------------TTEEEEECCTTSCHHHHHTTTT--TCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-------------CCceEEEecccCCHHHHHHHHc--CCCEEEEC
Confidence 79999999999999999999999999987653211 479999999999 999999999 89999999
Q ss_pred cCCC--------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHH-hhcCCcEE
Q 029198 80 NGRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL-ESKGVNWT 147 (197)
Q Consensus 80 a~~~--------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~-~~~~~~~~ 147 (197)
++.. ..++.+++++++ ++++||++||..+++.. +..| .+..|...| .+|..+|.++ +..+++++
T Consensus 71 ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ 146 (219)
T 3dqp_A 71 SGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDALKDYYIAKHFADLYLTKETNLDYT 146 (219)
T ss_dssp CCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHTHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccccHHHHHHHHHHHHHHhccCCcEE
Confidence 9874 345788999988 78899999998777543 2333 334455667 9999999999 88899999
Q ss_pred EEccceeeCCC
Q 029198 148 SLRPVYIYGPL 158 (197)
Q Consensus 148 i~r~~~i~g~~ 158 (197)
++||+++||+.
T Consensus 147 ilrp~~v~g~~ 157 (219)
T 3dqp_A 147 IIQPGALTEEE 157 (219)
T ss_dssp EEEECSEECSC
T ss_pred EEeCceEecCC
Confidence 99999999975
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-25 Score=176.54 Aligned_cols=188 Identities=18% Similarity=0.188 Sum_probs=136.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccC--CCCCCCch-----hhhhccCceEEEeecCCCHHHHHhhhhccCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQ-----EFAEFSSKILHLKGDRKDYDFVKSSLSAKGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~ 73 (197)
|||||+||++++++|++.|++|++++|++..... .+...... .......++.++.+|+.|++.+. .+. ++
T Consensus 75 TGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~--~~ 151 (427)
T 4f6c_A 75 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE--NM 151 (427)
T ss_dssp ECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-CSS--CC
T ss_pred ecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-CcC--CC
Confidence 7999999999999999999999999998772100 00000000 00111367999999999988777 444 99
Q ss_pred cEEEeccCCC-------------ccchHHHHHhCC-CCCcEEEEecceeccc-----CCCCCCCCCCC---CCCCCcc-h
Q 029198 74 DVVYDINGRE-------------ADEVEPILDALP-NLEQFIYCSSAGVYLK-----SDLLPHCETDT---VDPKSRH-K 130 (197)
Q Consensus 74 d~vi~~a~~~-------------~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~-----~~~~~~~e~~~---~~~~~~~-~ 130 (197)
|+|||+|+.. +.++.++++++. +.++||++||..+ |. ....+++|+++ ..+.+.| .
T Consensus 152 d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~ 230 (427)
T 4f6c_A 152 DTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTR 230 (427)
T ss_dssp SEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCCCCSHHHH
T ss_pred CEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCccccccccccCCCCCCchHH
Confidence 9999999864 234678888888 8899999999988 53 23456777776 3456668 9
Q ss_pred hhhhHHHHHhh---cCCcEEEEccceeeCCCCCC--------ChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 131 GKLNTESVLES---KGVNWTSLRPVYIYGPLNYN--------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 131 ~k~~~e~~~~~---~~~~~~i~r~~~i~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+|+.+|.++++ .+++++++||+++||+.... .++..+++.+..+..++. +.++..++|+||+
T Consensus 231 sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~ 303 (427)
T 4f6c_A 231 SKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVD 303 (427)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEEHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeeHH
Confidence 99999998865 79999999999999997433 235667777777776655 3457888997764
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.5e-24 Score=164.55 Aligned_cols=167 Identities=17% Similarity=0.257 Sum_probs=132.6
Q ss_pred CCcccchHHHHHHHHHHC-CC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE-GH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||||++|++++++|++. |+ +|++++|++.+..... ..+ ...++.++.+|+.|.+++.++++ ++|+|||
T Consensus 27 TGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~-----~~~--~~~~v~~~~~Dl~d~~~l~~~~~--~~D~Vih 97 (344)
T 2gn4_A 27 TGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMA-----MEF--NDPRMRFFIGDVRDLERLNYALE--GVDICIH 97 (344)
T ss_dssp ETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHH-----HHH--CCTTEEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred ECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHH-----HHh--cCCCEEEEECCCCCHHHHHHHHh--cCCEEEE
Confidence 799999999999999999 97 9999999755421100 000 02478999999999999999998 8999999
Q ss_pred ccCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHH
Q 029198 79 INGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL 139 (197)
Q Consensus 79 ~a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~ 139 (197)
+|+... .++.++++++. ++++||++||...+ .|.+.| .+|..+|.++
T Consensus 98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~--------------~p~~~Y~~sK~~~E~~~ 163 (344)
T 2gn4_A 98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA--------------NPINLYGATKLCSDKLF 163 (344)
T ss_dssp CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS--------------SCCSHHHHHHHHHHHHH
T ss_pred CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC--------------CCccHHHHHHHHHHHHH
Confidence 998753 23578888887 78999999996653 234567 9999999987
Q ss_pred hh-------cCCcEEEEccceeeCCCCCCChHHHHHHHHHcCC-CcccCCCCceeEEEEEEE
Q 029198 140 ES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 140 ~~-------~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~i~v~ 193 (197)
+. .+++++++|||++||+. ..+++.+.+.+.+|+ ++.+. ++++.++|+|++
T Consensus 164 ~~~~~~~~~~g~~~~~vRpg~v~g~~--~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~ 222 (344)
T 2gn4_A 164 VSANNFKGSSQTQFSVVRYGNVVGSR--GSVVPFFKKLVQNKASEIPIT-DIRMTRFWITLD 222 (344)
T ss_dssp HHGGGCCCSSCCEEEEECCCEETTCT--TSHHHHHHHHHHHTCCCEEES-CTTCEEEEECHH
T ss_pred HHHHHHhCCCCcEEEEEEeccEECCC--CCHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHH
Confidence 53 47999999999999995 357778888888888 77765 677888887654
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=168.13 Aligned_cols=178 Identities=16% Similarity=0.177 Sum_probs=133.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|++.|++|++++|++....... ..+.. ...+++++.+|+.|.+++.+++++.++|+|||+
T Consensus 16 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-----~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~ 90 (346)
T 3i6i_A 16 AGATGFIGQFVATASLDAHRPTYILARPGPRSPSKA-----KIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST 90 (346)
T ss_dssp ECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHH-----HHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred ECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHH-----HHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence 799999999999999999999999999873311100 00000 125799999999999999999987799999999
Q ss_pred cCC-CccchHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhcCCcEEEEcccee
Q 029198 80 NGR-EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYI 154 (197)
Q Consensus 80 a~~-~~~~~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~~i~r~~~i 154 (197)
++. +..++.+++++++ + +++||+ | +||.. .+|..+..|...| .+|+.+|+++++.+++++++|||++
T Consensus 91 a~~~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivrpg~~ 162 (346)
T 3i6i_A 91 VGGESILDQIALVKAMKAVGTIKRFLP-S---EFGHD----VNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSI 162 (346)
T ss_dssp CCGGGGGGHHHHHHHHHHHCCCSEEEC-S---CCSSC----TTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEECCEE
T ss_pred CchhhHHHHHHHHHHHHHcCCceEEee-c---ccCCC----CCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEEeccc
Confidence 987 5677899999998 7 888885 4 45432 3444455555566 9999999999999999999999999
Q ss_pred eCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+|.... .+... ......+..+.++++|++.++|+|++
T Consensus 163 ~g~~~~-~~~~~-~~~~~~~~~~~~~g~g~~~~~~i~~~ 199 (346)
T 3i6i_A 163 ASWPYY-NNIHP-SEVLPPTDFFQIYGDGNVKAYFVAGT 199 (346)
T ss_dssp SSCCCS-CC------CCCCSSCEEEETTSCCCEEEECHH
T ss_pred ccccCc-ccccc-ccccCCCceEEEccCCCceEEecCHH
Confidence 997432 22211 11222556677889999999997753
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.8e-24 Score=165.61 Aligned_cols=175 Identities=22% Similarity=0.249 Sum_probs=130.3
Q ss_pred CCcccchHHHHHHHHHHCC-----CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccC-cc
Q 029198 1 MGGTRFIGVFLSRLLVKEG-----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG-FD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~-~d 74 (197)
||||||+|++++++|+++| ++|++++|++.... +. ..+++++.+|+.|++++.++++... +|
T Consensus 7 tGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~----------~~~~~~~~~Dl~d~~~~~~~~~~~~~~d 74 (364)
T 2v6g_A 7 VGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HE----------DNPINYVQCDISDPDDSQAKLSPLTDVT 74 (364)
T ss_dssp ETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CC----------SSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred ECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cc----------cCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence 7999999999999999999 99999999876532 11 2478999999999999999998433 99
Q ss_pred EEEeccCCCc-----------cchHHHHHhCC----CCCcEE-------EEecceecccC--CCCCCCCCCCCCC-CCcc
Q 029198 75 VVYDINGREA-----------DEVEPILDALP----NLEQFI-------YCSSAGVYLKS--DLLPHCETDTVDP-KSRH 129 (197)
Q Consensus 75 ~vi~~a~~~~-----------~~~~~ll~~~~----~~~~~v-------~~Ss~~vyg~~--~~~~~~e~~~~~~-~~~~ 129 (197)
+|||+|+... .++.+++++++ +++++| ++||..+||.. ...+++|+++..| .+.|
T Consensus 75 ~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y 154 (364)
T 2v6g_A 75 HVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY 154 (364)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH
T ss_pred EEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh
Confidence 9999998642 34778898887 377887 79999999875 3457788876555 3445
Q ss_pred hhhhhHHHHH----hhcC-CcEEEEccceeeCCCCCC--C-hHHH-HHHHH--HcCCCcccCCCCceeEEEE
Q 029198 130 KGKLNTESVL----ESKG-VNWTSLRPVYIYGPLNYN--P-VEEW-FFHRL--KAGRPIPIPGSGIQVTQLG 190 (197)
Q Consensus 130 ~~k~~~e~~~----~~~~-~~~~i~r~~~i~g~~~~~--~-~~~~-~~~~~--~~~~~~~~~~~g~~~~~~i 190 (197)
..+|+++ ++.+ ++++++||+++|||+... . +... +.+.+ .+++++.++++++++++++
T Consensus 155 ---~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~ 223 (364)
T 2v6g_A 155 ---YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYS 223 (364)
T ss_dssp ---HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCB
T ss_pred ---HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccC
Confidence 3455554 3356 999999999999997532 2 2333 34444 4788877788875554443
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=157.19 Aligned_cols=143 Identities=14% Similarity=0.067 Sum_probs=122.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+|+||++++++|+++|++|++++|++.+.. ..+++++.+|+.|++++.++++ ++|+|||+|
T Consensus 9 TGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~A 72 (267)
T 3rft_A 9 TGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------------GPNEECVQCDLADANAVNAMVA--GCDGIVHLG 72 (267)
T ss_dssp ESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------------CTTEEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------------CCCCEEEEcCCCCHHHHHHHHc--CCCEEEECC
Confidence 799999999999999999999999999876532 2578999999999999999999 999999999
Q ss_pred CCCc------------cchHHHHHhCC--CCCcEEEEecceeccc-CCCCCCCCCCCCCCCCcc-hhhhhHHHHHh----
Q 029198 81 GREA------------DEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVLE---- 140 (197)
Q Consensus 81 ~~~~------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~-~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~---- 140 (197)
+... .++.+++++++ +.++||++||..+|+. ....+++|+.+..|...| .+|..+|.+++
T Consensus 73 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~ 152 (267)
T 3rft_A 73 GISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFD 152 (267)
T ss_dssp SCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 8742 23667888887 7789999999999974 345577888888888888 99999998764
Q ss_pred hcCCcEEEEccceeeCCCC
Q 029198 141 SKGVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 141 ~~~~~~~i~r~~~i~g~~~ 159 (197)
+.+++++++||+.+|++..
T Consensus 153 ~~g~~~~~vr~~~v~~~~~ 171 (267)
T 3rft_A 153 KFGQETALVRIGSCTPEPN 171 (267)
T ss_dssp HHCCCEEEEEECBCSSSCC
T ss_pred HhCCeEEEEEeecccCCCC
Confidence 5799999999999999753
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-24 Score=156.97 Aligned_cols=143 Identities=15% Similarity=0.152 Sum_probs=112.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||++|++++++|+++|++|++++|++++..... ..+++++.+|+.|+++ +++. ++|+|||++
T Consensus 6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----------~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a 70 (224)
T 3h2s_A 6 LGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-----------GATVATLVKEPLVLTE--ADLD--SVDAVVDAL 70 (224)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-----------CTTSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred EcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-----------CCCceEEecccccccH--hhcc--cCCEEEECC
Confidence 799999999999999999999999999866532111 2578999999999887 6676 899999999
Q ss_pred CCC---------ccchHHHHHhCC--CCCcEEEEecceecc-cCCC--CCCCCCCCCCCCCcc-hhhhhHHHH--H-hhc
Q 029198 81 GRE---------ADEVEPILDALP--NLEQFIYCSSAGVYL-KSDL--LPHCETDTVDPKSRH-KGKLNTESV--L-ESK 142 (197)
Q Consensus 81 ~~~---------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg-~~~~--~~~~e~~~~~~~~~~-~~k~~~e~~--~-~~~ 142 (197)
+.. ...+++++++++ + +++|++||.+.+. .... .+.++...+.|...| .+|...|.+ + +..
T Consensus 71 g~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~ 149 (224)
T 3h2s_A 71 SVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNA 149 (224)
T ss_dssp CCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCT
T ss_pred ccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcC
Confidence 873 345789999998 6 9999999986544 3222 234444444556777 899998864 2 467
Q ss_pred CCcEEEEccceeeCCCC
Q 029198 143 GVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 143 ~~~~~i~r~~~i~g~~~ 159 (197)
+++++++||+++||++.
T Consensus 150 ~i~~~ivrp~~v~g~~~ 166 (224)
T 3h2s_A 150 NVNWIGISPSEAFPSGP 166 (224)
T ss_dssp TSCEEEEEECSBCCCCC
T ss_pred CCcEEEEcCccccCCCc
Confidence 99999999999999853
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-24 Score=175.77 Aligned_cols=166 Identities=15% Similarity=0.082 Sum_probs=125.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|++.|++|++++|++.+.. .+.+|+.+. +.++++ ++|+|||+|
T Consensus 153 TGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~-------------------~v~~d~~~~--~~~~l~--~~D~Vih~A 209 (516)
T 3oh8_A 153 TGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG-------------------KRFWDPLNP--ASDLLD--GADVLVHLA 209 (516)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT-------------------CEECCTTSC--CTTTTT--TCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc-------------------ceeecccch--hHHhcC--CCCEEEECC
Confidence 799999999999999999999999999876521 145666543 345566 899999999
Q ss_pred CCC-----------------ccchHHHHHh-CC--CCCcEEEEecceecc-cCCCCCCCCCCCCCCCCcc-hhhhhHHHH
Q 029198 81 GRE-----------------ADEVEPILDA-LP--NLEQFIYCSSAGVYL-KSDLLPHCETDTVDPKSRH-KGKLNTESV 138 (197)
Q Consensus 81 ~~~-----------------~~~~~~ll~~-~~--~~~~~v~~Ss~~vyg-~~~~~~~~e~~~~~~~~~~-~~k~~~e~~ 138 (197)
+.. ..++.+++++ ++ ++++||++||.++|| .....+++|+.+. +.+.| ..|...|..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~~E~~ 288 (516)
T 3oh8_A 210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRDWEHA 288 (516)
T ss_dssp CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHHHHHT
T ss_pred CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHHHHHH
Confidence 863 2237788888 44 788999999999999 5555577787765 66666 677777765
Q ss_pred H---hhcCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 139 L---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 139 ~---~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
. +..+++++++||+++||++. .++..+...+..+... .++++++.++|+|++
T Consensus 289 ~~~~~~~gi~~~ilRp~~v~Gp~~--~~~~~~~~~~~~g~~~-~~g~g~~~~~~i~v~ 343 (516)
T 3oh8_A 289 TAPASDAGKRVAFIRTGVALSGRG--GMLPLLKTLFSTGLGG-KFGDGTSWFSWIAID 343 (516)
T ss_dssp THHHHHTTCEEEEEEECEEEBTTB--SHHHHHHHTTC---CC-CCTTSCCEECEEEHH
T ss_pred HHHHHhCCCCEEEEEeeEEECCCC--ChHHHHHHHHHhCCCc-ccCCCCceEceEeHH
Confidence 4 46799999999999999963 5666666666666543 568889999998864
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=157.16 Aligned_cols=163 Identities=19% Similarity=0.139 Sum_probs=130.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||++|++++++|++ |++|++++|+++.. .+ +.+|+.|++++.++++..++|+|||+|
T Consensus 6 tGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~----------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a 65 (273)
T 2ggs_A 6 TGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ----------------GG---YKLDLTDFPRLEDFIIKKRPDVIINAA 65 (273)
T ss_dssp ETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT----------------TC---EECCTTSHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCChhHHHHHHHHhc-CCeEEEecCCCcCC----------------CC---ceeccCCHHHHHHHHHhcCCCEEEECC
Confidence 79999999999999994 89999999986420 12 789999999999999855699999999
Q ss_pred CCCc----------------cchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhc
Q 029198 81 GREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~ 142 (197)
+... .++.+++++++ ...+||++||..+|+.... +++|+++..|.+.| .+|..+|.+++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~~~~- 143 (273)
T 2ggs_A 66 AMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLGETFALQ- 143 (273)
T ss_dssp CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHHHHHHCC-
T ss_pred cccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHHHHHHhC-
Confidence 8742 23677888887 3249999999999986543 78888888887888 999999999987
Q ss_pred CCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEE
Q 029198 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (197)
Q Consensus 143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 192 (197)
++++++||+++||+ ..+...++..+.+++++.++++ .++++|+
T Consensus 144 -~~~~~iR~~~v~G~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 186 (273)
T 2ggs_A 144 -DDSLIIRTSGIFRN---KGFPIYVYKTLKEGKTVFAFKG---YYSPISA 186 (273)
T ss_dssp -TTCEEEEECCCBSS---SSHHHHHHHHHHTTCCEEEESC---EECCCBH
T ss_pred -CCeEEEeccccccc---cHHHHHHHHHHHcCCCEEeecC---CCCceEH
Confidence 89999999999983 3466666677778877766553 5677554
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.9e-23 Score=162.19 Aligned_cols=145 Identities=19% Similarity=0.217 Sum_probs=122.6
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|+++|+ +|+.++|+ .|++++.++++ ++|+|||+
T Consensus 6 tGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------------~d~~~l~~~~~--~~d~Vih~ 53 (369)
T 3st7_A 6 TGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------------TKEEELESALL--KADFIVHL 53 (369)
T ss_dssp ETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------------CCHHHHHHHHH--HCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------------CCHHHHHHHhc--cCCEEEEC
Confidence 79999999999999999998 88877663 57788999998 89999999
Q ss_pred cCCC------------ccchHHHHHhCC--CCC-cEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhh--
Q 029198 80 NGRE------------ADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES-- 141 (197)
Q Consensus 80 a~~~------------~~~~~~ll~~~~--~~~-~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~-- 141 (197)
|+.. ..++.+++++++ +++ +||++||..+|+ .+.| .+|..+|.++++
T Consensus 54 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------------~~~Y~~sK~~~E~~~~~~~ 118 (369)
T 3st7_A 54 AGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------DNPYGESKLQGEQLLREYA 118 (369)
T ss_dssp CCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---------------CSHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---------------CCCchHHHHHHHHHHHHHH
Confidence 9863 345789999998 665 999999999986 3456 999999998865
Q ss_pred --cCCcEEEEccceeeCCCCC---CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 142 --KGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 142 --~~~~~~i~r~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+++++++||+++||++.. .+++..++..+.+++++.+ +++++.++|+|++
T Consensus 119 ~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~ 174 (369)
T 3st7_A 119 EEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVD 174 (369)
T ss_dssp HHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHH
T ss_pred HHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHH
Confidence 7999999999999999743 3578888999999988776 4778889998875
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-23 Score=151.31 Aligned_cols=142 Identities=21% Similarity=0.295 Sum_probs=105.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||++|++++++|+++|++|++++|++++... ...+++++.+|+.|+++ +++. ++|+|||++
T Consensus 6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------------~~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a 69 (221)
T 3ew7_A 6 IGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ------------THKDINILQKDIFDLTL--SDLS--DQNVVVDAY 69 (221)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH------------HCSSSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred EcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh------------ccCCCeEEeccccChhh--hhhc--CCCEEEECC
Confidence 7999999999999999999999999998655221 11578999999999887 6676 899999999
Q ss_pred CCCc-------cchHHHHHhCC--CCCcEEEEecceec-ccCCCCCCCCCCCCCCCCcc-hhhhhHHHH--Hh--hcCCc
Q 029198 81 GREA-------DEVEPILDALP--NLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRH-KGKLNTESV--LE--SKGVN 145 (197)
Q Consensus 81 ~~~~-------~~~~~ll~~~~--~~~~~v~~Ss~~vy-g~~~~~~~~e~~~~~~~~~~-~~k~~~e~~--~~--~~~~~ 145 (197)
+... ..+++++++++ +.+++|++||...+ +.....+..|+.+..|...| .+|...|.+ ++ ..+++
T Consensus 70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~ 149 (221)
T 3ew7_A 70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFS 149 (221)
T ss_dssp CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSC
T ss_pred cCCccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 8743 34688999998 68999999998754 44444455666666677777 888888875 55 68999
Q ss_pred EEEEccceeeCCC
Q 029198 146 WTSLRPVYIYGPL 158 (197)
Q Consensus 146 ~~i~r~~~i~g~~ 158 (197)
++++||+++||++
T Consensus 150 ~~ivrp~~v~g~~ 162 (221)
T 3ew7_A 150 WTYISPSAMFEPG 162 (221)
T ss_dssp EEEEECSSCCCCC
T ss_pred EEEEeCcceecCC
Confidence 9999999999984
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-23 Score=161.92 Aligned_cols=156 Identities=18% Similarity=0.266 Sum_probs=112.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++++++|+++|++|++++|+....... .. ...+.....+++++.+|+.|++++.++++ ++|+|||+|
T Consensus 11 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~--~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~A 85 (337)
T 2c29_D 11 TGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKV-KH--LLDLPKAETHLTLWKADLADEGSFDEAIK--GCTGVFHVA 85 (337)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHH-HH--HHTSTTHHHHEEEEECCTTSTTTTHHHHT--TCSEEEECC
T ss_pred ECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHH-HH--HHhcccCCCeEEEEEcCCCCHHHHHHHHc--CCCEEEEec
Confidence 89999999999999999999999999986531100 00 00000001358899999999999999998 899999999
Q ss_pred CCCc---------------cchHHHHHhCC--C-CCcEEEEecce-ecccCC-CCCCCCCCCCC---------CCCcc-h
Q 029198 81 GREA---------------DEVEPILDALP--N-LEQFIYCSSAG-VYLKSD-LLPHCETDTVD---------PKSRH-K 130 (197)
Q Consensus 81 ~~~~---------------~~~~~ll~~~~--~-~~~~v~~Ss~~-vyg~~~-~~~~~e~~~~~---------~~~~~-~ 130 (197)
+... .++.+++++++ + +++||++||.. +|+... ..+++|+.+.. +...| .
T Consensus 86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~ 165 (337)
T 2c29_D 86 TPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFV 165 (337)
T ss_dssp CCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHH
T ss_pred cccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHH
Confidence 7531 13567888877 5 89999999987 555432 22355554211 23347 8
Q ss_pred hhhhHHHHHh----hcCCcEEEEccceeeCCCCCC
Q 029198 131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN 161 (197)
Q Consensus 131 ~k~~~e~~~~----~~~~~~~i~r~~~i~g~~~~~ 161 (197)
+|..+|.++. ..+++++++||+++|||+...
T Consensus 166 sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~ 200 (337)
T 2c29_D 166 SKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMS 200 (337)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCS
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCC
Confidence 9999998763 468999999999999997533
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=146.49 Aligned_cols=135 Identities=19% Similarity=0.291 Sum_probs=112.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||++|++++++|+++|++|++++|++++..... ..+++++.+|+.|++++.++++ ++|+|||++
T Consensus 9 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a 75 (206)
T 1hdo_A 9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-----------PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLL 75 (206)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-----------CCCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred EcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-----------CCceEEEEecCCCHHHHHHHHc--CCCEEEECc
Confidence 699999999999999999999999999876532211 2478999999999999999998 899999999
Q ss_pred CCCc---------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhcCCcEEE
Q 029198 81 GREA---------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTS 148 (197)
Q Consensus 81 ~~~~---------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~~i 148 (197)
+... ..+.+++++++ ++++||++||..+|+.....+ .+...| .+|..+|.++++.++++++
T Consensus 76 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-------~~~~~y~~~K~~~e~~~~~~~i~~~~ 148 (206)
T 1hdo_A 76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-------PRLQAVTDDHIRMHKVLRESGLKYVA 148 (206)
T ss_dssp CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-------GGGHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred cCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccccc-------ccchhHHHHHHHHHHHHHhCCCCEEE
Confidence 8643 24778888887 788999999999987543211 134456 9999999999999999999
Q ss_pred Eccceee
Q 029198 149 LRPVYIY 155 (197)
Q Consensus 149 ~r~~~i~ 155 (197)
+||++++
T Consensus 149 lrp~~~~ 155 (206)
T 1hdo_A 149 VMPPHIG 155 (206)
T ss_dssp ECCSEEE
T ss_pred EeCCccc
Confidence 9999983
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.6e-23 Score=155.74 Aligned_cols=141 Identities=14% Similarity=0.038 Sum_probs=119.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||++|++++++|+++|++|++++|++.... ..+++++.+|+.|++++.++++ ++|+|||+|
T Consensus 8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a 71 (267)
T 3ay3_A 8 TGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA--------------EAHEEIVACDLADAQAVHDLVK--DCDGIIHLG 71 (267)
T ss_dssp ESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC--------------CTTEEECCCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc--------------CCCccEEEccCCCHHHHHHHHc--CCCEEEECC
Confidence 799999999999999999999999999865421 1357889999999999999998 899999999
Q ss_pred CCCc------------cchHHHHHhCC--CCCcEEEEecceecccC-CCCCCCCCCCCCCCCcc-hhhhhHHHHHh----
Q 029198 81 GREA------------DEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTESVLE---- 140 (197)
Q Consensus 81 ~~~~------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~-~~~~~~e~~~~~~~~~~-~~k~~~e~~~~---- 140 (197)
+... .++.+++++++ ++++||++||..+|+.. ...+++|+++..|...| .+|..+|.+++
T Consensus 72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~ 151 (267)
T 3ay3_A 72 GVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH 151 (267)
T ss_dssp SCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 8642 23577888887 77899999999999864 35678899888888888 99999998864
Q ss_pred hcCCcEEEEccceeeCC
Q 029198 141 SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 141 ~~~~~~~i~r~~~i~g~ 157 (197)
+.+++++++||+++|+.
T Consensus 152 ~~gi~~~~lrp~~v~~~ 168 (267)
T 3ay3_A 152 KFDIETLNIRIGSCFPK 168 (267)
T ss_dssp TTCCCEEEEEECBCSSS
T ss_pred HcCCCEEEEeceeecCC
Confidence 46899999999999853
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-24 Score=163.37 Aligned_cols=160 Identities=16% Similarity=0.167 Sum_probs=122.8
Q ss_pred CCcccchHHHHHHHHHHC--CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||||++|++++++|+++ |++|++++|++++.. .+. ..+++++.+|+.|++++.++++ ++|+|||
T Consensus 6 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---------~l~--~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~ 72 (287)
T 2jl1_A 6 TGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS---------TLA--DQGVEVRHGDYNQPESLQKAFA--GVSKLLF 72 (287)
T ss_dssp TTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH---------HHH--HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred EcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh---------HHh--hcCCeEEEeccCCHHHHHHHHh--cCCEEEE
Confidence 799999999999999999 999999999865421 111 1468899999999999999998 8999999
Q ss_pred ccCCC------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhcCCcEEEE
Q 029198 79 INGRE------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSL 149 (197)
Q Consensus 79 ~a~~~------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~~i~ 149 (197)
+++.. ..++.+++++++ ++++||++||..+|.. | ..| .+|..+|+++++.+++++++
T Consensus 73 ~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~-------------~-~~y~~~K~~~E~~~~~~~~~~~il 138 (287)
T 2jl1_A 73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES-------------I-IPLAHVHLATEYAIRTTNIPYTFL 138 (287)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC-------------C-STHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC-------------C-CchHHHHHHHHHHHHHcCCCeEEE
Confidence 99863 346788999988 7899999999887621 1 245 99999999999999999999
Q ss_pred ccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 150 r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
||++++|+.. ..++ ...+..+... .+.+++.++|+|++
T Consensus 139 rp~~~~~~~~-~~~~---~~~~~~~~~~--~~~~~~~~~~i~~~ 176 (287)
T 2jl1_A 139 RNALYTDFFV-NEGL---RASTESGAIV--TNAGSGIVNSVTRN 176 (287)
T ss_dssp EECCBHHHHS-SGGG---HHHHHHTEEE--ESCTTCCBCCBCHH
T ss_pred ECCEeccccc-hhhH---HHHhhCCcee--ccCCCCccCccCHH
Confidence 9999888631 1222 2223344432 34456677776653
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.9e-24 Score=164.16 Aligned_cols=154 Identities=20% Similarity=0.259 Sum_probs=112.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|+++||+|++++|+.+.... ... ...+ ....+++++.+|+.|++++.++++ ++|+|||+|
T Consensus 15 TGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~-~~~--~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A 88 (338)
T 2rh8_A 15 VGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKK-VSH--LLEL-QELGDLKIFRADLTDELSFEAPIA--GCDFVFHVA 88 (338)
T ss_dssp ECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTT-THH--HHHH-GGGSCEEEEECCTTTSSSSHHHHT--TCSEEEEES
T ss_pred ECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhh-HHH--HHhc-CCCCcEEEEecCCCChHHHHHHHc--CCCEEEEeC
Confidence 7999999999999999999999999997654211 000 0011 112468899999999999999998 899999998
Q ss_pred CCCc---------------cchHHHHHhCC--C-CCcEEEEecce-ecccCC---CCCCCCCCCCC--------CCC-cc
Q 029198 81 GREA---------------DEVEPILDALP--N-LEQFIYCSSAG-VYLKSD---LLPHCETDTVD--------PKS-RH 129 (197)
Q Consensus 81 ~~~~---------------~~~~~ll~~~~--~-~~~~v~~Ss~~-vyg~~~---~~~~~e~~~~~--------~~~-~~ 129 (197)
+... .++.+++++++ + +++||++||.. +|+... ..+++|+.+.. |.. .|
T Consensus 89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y 168 (338)
T 2rh8_A 89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY 168 (338)
T ss_dssp SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence 7521 13667888876 4 78999999977 454321 12566664221 112 36
Q ss_pred -hhhhhHHHHHh----hcCCcEEEEccceeeCCCCC
Q 029198 130 -KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY 160 (197)
Q Consensus 130 -~~k~~~e~~~~----~~~~~~~i~r~~~i~g~~~~ 160 (197)
.+|..+|.++. ..+++++++||+++|||+..
T Consensus 169 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~ 204 (338)
T 2rh8_A 169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLT 204 (338)
T ss_dssp TTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSS
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence 99999998763 36899999999999999743
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=152.68 Aligned_cols=161 Identities=15% Similarity=0.170 Sum_probs=120.6
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|++. |++|++++|++++..... ..+++++.+|+.|++++.++++ ++|+|||+
T Consensus 6 tGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-----------~~~v~~~~~D~~d~~~l~~~~~--~~d~vi~~ 72 (289)
T 3e48_A 6 TGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-----------RGKVSVRQLDYFNQESMVEAFK--GMDTVVFI 72 (289)
T ss_dssp ETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-----------BTTBEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred EcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-----------hCCCEEEEcCCCCHHHHHHHHh--CCCEEEEe
Confidence 799999999999999998 999999999876532211 2579999999999999999999 99999999
Q ss_pred cCCCc------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcchhhhhHHHHHhhcCCcEEEEcc
Q 029198 80 NGREA------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP 151 (197)
Q Consensus 80 a~~~~------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~i~r~ 151 (197)
++... ..+++++++++ ++++||++||.+. ... .|......+..+|..+++.+++++++||
T Consensus 73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~~~---------~~~~~~~~~~~~e~~~~~~g~~~~ilrp 140 (289)
T 3e48_A 73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---QHN---------NPFHMSPYFGYASRLLSTSGIDYTYVRM 140 (289)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---STT---------CCSTTHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC---CCC---------CCCccchhHHHHHHHHHHcCCCEEEEec
Confidence 98742 45788999988 8899999999442 111 1111113345778888899999999999
Q ss_pred ceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+++||+. ...+......+. . .++.+++.++|+|++
T Consensus 141 ~~~~~~~-----~~~~~~~~~~~~-~-~~~~g~~~~~~i~~~ 175 (289)
T 3e48_A 141 AMYMDPL-----KPYLPELMNMHK-L-IYPAGDGRINYITRN 175 (289)
T ss_dssp CEESTTH-----HHHHHHHHHHTE-E-CCCCTTCEEEEECHH
T ss_pred ccccccc-----HHHHHHHHHCCC-E-ecCCCCceeeeEEHH
Confidence 9999972 233333333333 2 345678888887653
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-22 Score=148.34 Aligned_cols=146 Identities=20% Similarity=0.219 Sum_probs=116.6
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||+|++|++++++|+++|+ +|++++|+++...... ..++.++.+|+.|++++.++++ ++|+|||
T Consensus 24 tGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~ 90 (242)
T 2bka_A 24 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----------YKNVNQEVVDFEKLDDYASAFQ--GHDVGFC 90 (242)
T ss_dssp ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----------GGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred ECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-----------cCCceEEecCcCCHHHHHHHhc--CCCEEEE
Confidence 79999999999999999999 9999999876532110 1368899999999999999998 8999999
Q ss_pred ccCCCc-------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhc
Q 029198 79 INGREA-------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (197)
Q Consensus 79 ~a~~~~-------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~ 142 (197)
+|+... .++.+++++++ +.++||++||..+|+. +...| .+|..+|.+++..
T Consensus 91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------------~~~~Y~~sK~~~e~~~~~~ 157 (242)
T 2bka_A 91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGEVEAKVEEL 157 (242)
T ss_dssp CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHHTT
T ss_pred CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-------------CcchHHHHHHHHHHHHHhc
Confidence 999742 34667888877 6789999999988752 23456 9999999999999
Q ss_pred CC-cEEEEccceeeCCCCCCChHHHHHHHHH
Q 029198 143 GV-NWTSLRPVYIYGPLNYNPVEEWFFHRLK 172 (197)
Q Consensus 143 ~~-~~~i~r~~~i~g~~~~~~~~~~~~~~~~ 172 (197)
++ +++++|||++||+.........+.....
T Consensus 158 ~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~ 188 (242)
T 2bka_A 158 KFDRYSVFRPGVLLCDRQESRPGEWLVRKFF 188 (242)
T ss_dssp CCSEEEEEECCEEECTTGGGSHHHHHHHHHH
T ss_pred CCCCeEEEcCceecCCCCCCcHHHHHHHHhh
Confidence 99 5999999999999643333344444443
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=9.3e-24 Score=159.37 Aligned_cols=158 Identities=20% Similarity=0.223 Sum_probs=119.4
Q ss_pred CCcccchHHHHHHHHHHC--CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||||++|++++++|+++ |++|++++|++++... +. ..+++++.+|+.|++++.++++ ++|+|||
T Consensus 5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---------~~--~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~ 71 (286)
T 2zcu_A 5 TGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA---------LA--AQGITVRQADYGDEAALTSALQ--GVEKLLL 71 (286)
T ss_dssp ESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH---------HH--HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred EcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh---------hh--cCCCeEEEcCCCCHHHHHHHHh--CCCEEEE
Confidence 799999999999999998 9999999998654211 11 1468899999999999999998 8999999
Q ss_pred ccCCC----ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhcCCcEEEEcc
Q 029198 79 INGRE----ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRP 151 (197)
Q Consensus 79 ~a~~~----~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~~i~r~ 151 (197)
+++.. ...+++++++++ ++++||++||..+|. .| ..| .+|..+|.++++.+++++++||
T Consensus 72 ~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~-~~y~~sK~~~e~~~~~~~~~~~ilrp 137 (286)
T 2zcu_A 72 ISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADT-------------SP-LGLADEHIETEKMLADSGIVYTLLRN 137 (286)
T ss_dssp CC--------CHHHHHHHHHHHHTCCEEEEEEETTTTT-------------CC-STTHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred eCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------Cc-chhHHHHHHHHHHHHHcCCCeEEEeC
Confidence 99853 457889999998 889999999988861 11 245 9999999999999999999999
Q ss_pred ceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEE
Q 029198 152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (197)
Q Consensus 152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 192 (197)
++++++.. .+ +...+..+ .+. ++++++.++|+|+
T Consensus 138 ~~~~~~~~--~~---~~~~~~~~-~~~-~~~~~~~~~~i~~ 171 (286)
T 2zcu_A 138 GWYSENYL--AS---APAALEHG-VFI-GAAGDGKIASATR 171 (286)
T ss_dssp CCBHHHHH--TT---HHHHHHHT-EEE-ESCTTCCBCCBCH
T ss_pred hHHhhhhH--HH---hHHhhcCC-cee-ccCCCCccccccH
Confidence 87666521 11 22222233 333 3456677777655
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.3e-22 Score=146.09 Aligned_cols=144 Identities=20% Similarity=0.258 Sum_probs=108.7
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|+++| ++|++++|++++..... ..+++++.+|+.|++++.++++ ++|+|||+
T Consensus 29 tGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~D~vv~~ 95 (236)
T 3qvo_A 29 LGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-----------PTNSQIIMGDVLNHAALKQAMQ--GQDIVYAN 95 (236)
T ss_dssp ETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-----------CTTEEEEECCTTCHHHHHHHHT--TCSEEEEE
T ss_pred EeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-----------cCCcEEEEecCCCHHHHHHHhc--CCCEEEEc
Confidence 7999999999999999999 89999999876643322 2478999999999999999999 89999999
Q ss_pred cCCCc--cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcchhhhhHHHHHhhcCCcEEEEccceee
Q 029198 80 NGREA--DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIY 155 (197)
Q Consensus 80 a~~~~--~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~i~r~~~i~ 155 (197)
++... ..+++++++++ ++++||++||..+|+.....+.... ...+..++..+..+|..+++.+++++++|||+++
T Consensus 96 a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~ 174 (236)
T 3qvo_A 96 LTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWN-NAVIGEPLKPFRRAADAIEASGLEYTILRPAWLT 174 (236)
T ss_dssp CCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC-----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEEE
T ss_pred CCCCchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccch-hhcccchHHHHHHHHHHHHHCCCCEEEEeCCccc
Confidence 98643 23678888887 7889999999999986543222111 1112233466777888899999999999999999
Q ss_pred CCC
Q 029198 156 GPL 158 (197)
Q Consensus 156 g~~ 158 (197)
++.
T Consensus 175 ~~~ 177 (236)
T 3qvo_A 175 DED 177 (236)
T ss_dssp CCS
T ss_pred CCC
Confidence 863
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.6e-22 Score=153.08 Aligned_cols=155 Identities=21% Similarity=0.261 Sum_probs=109.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEec-CCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
||||||||++++++|+++|++|++++| +++.... ... ...+.....+++++.+|+.|++++.++++ ++|+|||+
T Consensus 7 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~--~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~ 81 (322)
T 2p4h_X 7 TGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRD-VSF--LTNLPGASEKLHFFNADLSNPDSFAAAIE--GCVGIFHT 81 (322)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEECCCC----CC-CHH--HHTSTTHHHHEEECCCCTTCGGGGHHHHT--TCSEEEEC
T ss_pred ECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhH-HHH--HHhhhccCCceEEEecCCCCHHHHHHHHc--CCCEEEEc
Confidence 799999999999999999999999998 5432110 000 00000011357889999999999999998 89999999
Q ss_pred cCCC---------------ccchHHHHHhCC---CCCcEEEEeccee-cccCC-CCCCCCCCCC--------CCCC-cc-
Q 029198 80 NGRE---------------ADEVEPILDALP---NLEQFIYCSSAGV-YLKSD-LLPHCETDTV--------DPKS-RH- 129 (197)
Q Consensus 80 a~~~---------------~~~~~~ll~~~~---~~~~~v~~Ss~~v-yg~~~-~~~~~e~~~~--------~~~~-~~- 129 (197)
|+.. ..++.++++++. ++++||++||..+ |+... ..+++|+++. .|.. .|
T Consensus 82 A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~ 161 (322)
T 2p4h_X 82 ASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYA 161 (322)
T ss_dssp CCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHH
T ss_pred CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHH
Confidence 9642 123567888876 4689999999874 44322 2345555422 2232 37
Q ss_pred hhhhhHHHHHh----hcCCcEEEEccceeeCCCCC
Q 029198 130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY 160 (197)
Q Consensus 130 ~~k~~~e~~~~----~~~~~~~i~r~~~i~g~~~~ 160 (197)
.+|..+|.++. ..+++++++||+++|||...
T Consensus 162 ~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~ 196 (322)
T 2p4h_X 162 VSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVC 196 (322)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCS
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCC
Confidence 99999998763 46899999999999999743
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-22 Score=154.35 Aligned_cols=178 Identities=15% Similarity=0.145 Sum_probs=124.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|+++|++|++++|+........ ...+.. ...+++++.+|+.|++++.++++ ++|+|||+
T Consensus 10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~ 83 (313)
T 1qyd_A 10 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK----VQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVISA 83 (313)
T ss_dssp ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH----HHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEEC
T ss_pred EcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhH----HHHHHHHHhCCeEEEeCCCCCHHHHHHHHh--CCCEEEEC
Confidence 699999999999999999999999999865310000 000000 12578999999999999999998 89999999
Q ss_pred cCCC-----ccchHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCC-CCcchhhhhHHHHHhhcCCcEEEEc
Q 029198 80 NGRE-----ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLR 150 (197)
Q Consensus 80 a~~~-----~~~~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~~~~k~~~e~~~~~~~~~~~i~r 150 (197)
++.. ...+.+++++++ + +++||+ | +||.....+ ..+..| ...|.+|..+|+++++.+++++++|
T Consensus 84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y~sK~~~e~~~~~~g~~~~ilr 156 (313)
T 1qyd_A 84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITFIDKRKVRRAIEAASIPYTYVS 156 (313)
T ss_dssp CCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEE
T ss_pred CccccchhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchHHHHHHHHHHHHhcCCCeEEEE
Confidence 9864 456889999998 6 899985 3 455322211 122233 2346999999999999999999999
Q ss_pred cceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEE
Q 029198 151 PVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (197)
Q Consensus 151 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 192 (197)
|++++++.. ..+..........++.+.++++++..++|+|+
T Consensus 157 p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~ 197 (313)
T 1qyd_A 157 SNMFAGYFA-GSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDE 197 (313)
T ss_dssp CCEEHHHHT-TTSSCTTCCSSCCSSEECCBTTSCSEEEEECH
T ss_pred eceeccccc-cccccccccccCCCCeEEEeCCCCceEEEEEH
Confidence 999988521 11110000011234456677888888888765
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-22 Score=154.66 Aligned_cols=171 Identities=19% Similarity=0.264 Sum_probs=125.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||++|++++++|+++|++|++++|++......+ ..+ ...+++++.+|+.|++++.++++ ++|+|||++
T Consensus 17 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-----~~l--~~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi~~a 87 (318)
T 2r6j_A 17 FGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLL-----DEF--QSLGAIIVKGELDEHEKLVELMK--KVDVVISAL 87 (318)
T ss_dssp ETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHH-----HHH--HHTTCEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred ECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHH-----HHh--hcCCCEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence 699999999999999999999999999875211100 000 12468999999999999999998 899999999
Q ss_pred CCC-ccchHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCC-CCcchhhhhHHHHHhhcCCcEEEEccceee
Q 029198 81 GRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYIY 155 (197)
Q Consensus 81 ~~~-~~~~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~~~~k~~~e~~~~~~~~~~~i~r~~~i~ 155 (197)
+.. ...+++++++++ + +++||+ | +||... ++..+..| ...|.+|..+|.++++.+++++++||++++
T Consensus 88 ~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lr~~~~~ 159 (318)
T 2r6j_A 88 AFPQILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFA 159 (318)
T ss_dssp CGGGSTTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCCCCHHHHHHHHHHHHHHHHHHHTTCCBEEEECCEEH
T ss_pred chhhhHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccccCCCCcchhHHHHHHHHHHHHhcCCCeEEEEcceeh
Confidence 864 467889999998 6 889884 4 354321 12222223 234689999999999999999999999887
Q ss_pred CCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+. +...+......++.+.++++++..++|+|++
T Consensus 160 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 192 (318)
T 2r6j_A 160 SY-----FINYLLRPYDPKDEITVYGTGEAKFAMNYEQ 192 (318)
T ss_dssp HH-----HHHHHHCTTCCCSEEEEETTSCCEEEEECHH
T ss_pred hh-----hhhhhccccCCCCceEEecCCCceeeEeeHH
Confidence 64 2333333333455666778888888887643
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8.9e-23 Score=148.75 Aligned_cols=144 Identities=19% Similarity=0.281 Sum_probs=113.4
Q ss_pred CCcccchHHHHHHHHH-HCCCeEEEEecCCC-CccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKA-PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||||++|++++++|+ +.|++|++++|+++ ..... .....++.++.+|+.|++++.++++ ++|+|||
T Consensus 11 tGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vv~ 79 (221)
T 3r6d_A 11 LGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPE---------IIDHERVTVIEGSFQNPGXLEQAVT--NAEVVFV 79 (221)
T ss_dssp ESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHH---------HHTSTTEEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred EeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhh---------ccCCCceEEEECCCCCHHHHHHHHc--CCCEEEE
Confidence 7999999999999999 89999999999866 42211 0123578999999999999999998 9999999
Q ss_pred ccCCCccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC-cc-hhhhhHHHHHhhcCCcEEEEcccee
Q 029198 79 INGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RH-KGKLNTESVLESKGVNWTSLRPVYI 154 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~-~~-~~k~~~e~~~~~~~~~~~i~r~~~i 154 (197)
+++.....+++++++++ +.++||++||..+|+..... ..+... .... .| .+|..+|.++++.+++++++|||++
T Consensus 80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~-~~~~~~-~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v 157 (221)
T 3r6d_A 80 GAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVA-LEKWTF-DNLPISYVQGERQARNVLRESNLNYTILRLTWL 157 (221)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCCEEEEEEETTTTSCSCHH-HHHHHH-HTSCHHHHHHHHHHHHHHHHSCSEEEEEEECEE
T ss_pred cCCCCChhHHHHHHHHHhcCCCeEEEEeeceecCCCCcc-cccccc-cccccHHHHHHHHHHHHHHhCCCCEEEEechhh
Confidence 99873222888999888 77899999999988643210 000000 0112 46 8999999999999999999999999
Q ss_pred eCC
Q 029198 155 YGP 157 (197)
Q Consensus 155 ~g~ 157 (197)
+++
T Consensus 158 ~~~ 160 (221)
T 3r6d_A 158 YND 160 (221)
T ss_dssp ECC
T ss_pred cCC
Confidence 997
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.7e-22 Score=155.12 Aligned_cols=170 Identities=15% Similarity=0.142 Sum_probs=122.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeec-CCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD-RKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|+++|++|++++|++++... ..+ ....+++++.+| +.|++++.++++ ++|+|||+
T Consensus 11 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~l-~~~~~v~~v~~D~l~d~~~l~~~~~--~~d~Vi~~ 80 (352)
T 1xgk_A 11 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA-------EEL-QAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFIN 80 (352)
T ss_dssp ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH-------HHH-HTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH-------HHH-hhcCCcEEEECCccCCHHHHHHHHh--cCCEEEEc
Confidence 7999999999999999999999999998765210 001 112468899999 999999999998 89999998
Q ss_pred cCCC----ccchHHHHHhCC--C-CCcEEEEecce--ecccCCCCCCCCCCCCCCCCcchhhhhHHHHHhhcCCcEEEEc
Q 029198 80 NGRE----ADEVEPILDALP--N-LEQFIYCSSAG--VYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR 150 (197)
Q Consensus 80 a~~~----~~~~~~ll~~~~--~-~~~~v~~Ss~~--vyg~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~i~r 150 (197)
++.. ....++++++++ + +++||++||.. .|+. ..+..++.+|..+|+++++.+++++++|
T Consensus 81 a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------~~~~~y~~sK~~~E~~~~~~gi~~~ivr 149 (352)
T 1xgk_A 81 TTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------WPAVPMWAPKFTVENYVRQLGLPSTFVY 149 (352)
T ss_dssp CCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------CCCCTTTHHHHHHHHHHHTSSSCEEEEE
T ss_pred CCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCC-----------CCCccHHHHHHHHHHHHHHcCCCEEEEe
Confidence 8753 123478899887 7 89999999975 3321 1123344999999999999999999999
Q ss_pred cceeeCCCCCCChHHHHHHH-HHcCCC-cccCCCCceeEEEEEE
Q 029198 151 PVYIYGPLNYNPVEEWFFHR-LKAGRP-IPIPGSGIQVTQLGHV 192 (197)
Q Consensus 151 ~~~i~g~~~~~~~~~~~~~~-~~~~~~-~~~~~~g~~~~~~i~v 192 (197)
|+ +||++....+...+... ...+.. +.+++++++.++|+|+
T Consensus 150 pg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v 192 (352)
T 1xgk_A 150 AG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDA 192 (352)
T ss_dssp EC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECH
T ss_pred cc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEec
Confidence 87 68875432211100001 123332 1346667788898775
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-22 Score=149.27 Aligned_cols=135 Identities=14% Similarity=0.162 Sum_probs=109.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCce-EEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|+++|++|++++|++++... +. ..++ +++.+|+. +++.+++. ++|+|||+
T Consensus 27 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~---------~~--~~~~~~~~~~Dl~--~~~~~~~~--~~D~vi~~ 91 (236)
T 3e8x_A 27 VGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE---------LR--ERGASDIVVANLE--EDFSHAFA--SIDAVVFA 91 (236)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH---------HH--HTTCSEEEECCTT--SCCGGGGT--TCSEEEEC
T ss_pred ECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH---------HH--hCCCceEEEcccH--HHHHHHHc--CCCEEEEC
Confidence 7999999999999999999999999998765321 11 1367 99999999 67778887 99999999
Q ss_pred cCCC------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhcCC
Q 029198 80 NGRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGV 144 (197)
Q Consensus 80 a~~~------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~ 144 (197)
|+.. ..++.+++++++ ++++||++||.+.+.. +..+ .+...| .+|..+|.+++..++
T Consensus 92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~~~~Y~~sK~~~e~~~~~~gi 163 (236)
T 3e8x_A 92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MNMRHYLVAKRLADDELKRSSL 163 (236)
T ss_dssp CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GGGHHHHHHHHHHHHHHHHSSS
T ss_pred CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hhhhhHHHHHHHHHHHHHHCCC
Confidence 9874 234778999988 8899999999655432 1111 234457 999999999999999
Q ss_pred cEEEEccceeeCCC
Q 029198 145 NWTSLRPVYIYGPL 158 (197)
Q Consensus 145 ~~~i~r~~~i~g~~ 158 (197)
+++++||++++|+.
T Consensus 164 ~~~~lrpg~v~~~~ 177 (236)
T 3e8x_A 164 DYTIVRPGPLSNEE 177 (236)
T ss_dssp EEEEEEECSEECSC
T ss_pred CEEEEeCCcccCCC
Confidence 99999999999985
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.4e-22 Score=153.17 Aligned_cols=177 Identities=18% Similarity=0.231 Sum_probs=124.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|+++|++|++++|+....... .. ...+.. ...+++++.+|+.|++++.++++ ++|+|||+
T Consensus 10 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~--~~-~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~ 84 (308)
T 1qyc_A 10 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNS--EK-AQLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVIST 84 (308)
T ss_dssp ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTH--HH-HHHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEEEC
T ss_pred EcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCH--HH-HHHHHHHHhCCCEEEEeccCCHHHHHHHHc--CCCEEEEC
Confidence 69999999999999999999999999986532000 00 000001 12578999999999999999999 89999999
Q ss_pred cCCC-ccchHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCC-CCcchhhhhHHHHHhhcCCcEEEEcccee
Q 029198 80 NGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYI 154 (197)
Q Consensus 80 a~~~-~~~~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~~~~k~~~e~~~~~~~~~~~i~r~~~i 154 (197)
++.. ...+.+++++++ + +++||+ | +||... .+..+..| ...|.+|..+|.++++.+++++++||+++
T Consensus 85 a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~~~~ 156 (308)
T 1qyc_A 85 VGSLQIESQVNIIKAIKEVGTVKRFFP-S---EFGNDV----DNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCF 156 (308)
T ss_dssp CCGGGSGGGHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEE
T ss_pred CcchhhhhHHHHHHHHHhcCCCceEee-c---ccccCc----cccccCCcchhHHHHHHHHHHHHHhcCCCeEEEEecee
Confidence 9864 456789999998 6 899984 4 344321 12223333 23468999999999999999999999999
Q ss_pred eCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEE
Q 029198 155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (197)
Q Consensus 155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 192 (197)
+++.. ..+... ......++.+.+++++++.++|+|+
T Consensus 157 ~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (308)
T 1qyc_A 157 AGYFL-RSLAQA-GLTAPPRDKVVILGDGNARVVFVKE 192 (308)
T ss_dssp HHHHT-TTTTCT-TCSSCCSSEEEEETTSCCEEEEECH
T ss_pred ccccc-cccccc-cccCCCCCceEEecCCCceEEEecH
Confidence 88531 111100 0011234456677888888888764
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.1e-22 Score=150.51 Aligned_cols=178 Identities=20% Similarity=0.230 Sum_probs=123.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|+++|++|++++|++....... .. ...+.. ...+++++.+|+.|++++.++++ ++|+|||+
T Consensus 8 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~-~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~ 83 (307)
T 2gas_A 8 LGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPE-TK-EELIDNYQSLGVILLEGDINDHETLVKAIK--QVDIVICA 83 (307)
T ss_dssp ESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHH-HH-HHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred ECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChH-HH-HHHHHHHHhCCCEEEEeCCCCHHHHHHHHh--CCCEEEEC
Confidence 699999999999999999999999999862100000 00 000000 12578999999999999999999 89999999
Q ss_pred cCCC-ccchHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCC-CCcchhhhhHHHHHhhcCCcEEEEcccee
Q 029198 80 NGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYI 154 (197)
Q Consensus 80 a~~~-~~~~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~~~~k~~~e~~~~~~~~~~~i~r~~~i 154 (197)
++.. ...+.+++++++ + +++||+ | +||... .+..+..| ...|.+|..+|.++++.+++++++||+++
T Consensus 84 a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~i~~~~lrp~~~ 155 (307)
T 2gas_A 84 AGRLLIEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAF 155 (307)
T ss_dssp SSSSCGGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEE
T ss_pred CcccccccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCcchhHHHHHHHHHHHHHHcCCCeEEEEccee
Confidence 9864 467889999988 7 899883 3 454321 12222233 23468999999999999999999999999
Q ss_pred eCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEE
Q 029198 155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (197)
Q Consensus 155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 192 (197)
+++.. ..+... ......++.+.++++++..++|+|+
T Consensus 156 ~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 191 (307)
T 2gas_A 156 TGYFL-RNLAQL-DATDPPRDKVVILGDGNVKGAYVTE 191 (307)
T ss_dssp TTTTG-GGTTCT-TCSSCCSSEEEEETTSCSEEEEECH
T ss_pred ecccc-cccccc-ccccCCCCeEEEecCCCcceEEeeH
Confidence 88631 111100 0011234455667778888888664
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.5e-22 Score=151.73 Aligned_cols=174 Identities=18% Similarity=0.221 Sum_probs=124.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCC-CCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||||++|++++++|+++|++|++++|++ ....... ...+.. ...+++++.+|+.|++++.++++ ++|+|||
T Consensus 10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~--~~d~vi~ 83 (321)
T 3c1o_A 10 YGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSS----VQLREEFRSMGVTIIEGEMEEHEKMVSVLK--QVDIVIS 83 (321)
T ss_dssp ETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHH----HHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred EcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHH----HHHHHHhhcCCcEEEEecCCCHHHHHHHHc--CCCEEEE
Confidence 69999999999999999999999999986 2100000 000000 12578999999999999999999 8999999
Q ss_pred ccCCC-ccchHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCC-CCcchhhhhHHHHHhhcCCcEEEEccce
Q 029198 79 INGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVY 153 (197)
Q Consensus 79 ~a~~~-~~~~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~~~~k~~~e~~~~~~~~~~~i~r~~~ 153 (197)
+++.. ...+++++++++ + +++||+ | +||... ++..+..| ...|.+|..+|.++++.+++++++||++
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lrp~~ 155 (321)
T 3c1o_A 84 ALPFPMISSQIHIINAIKAAGNIKRFLP-S---DFGCEE----DRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANC 155 (321)
T ss_dssp CCCGGGSGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG----GGCCCCHHHHHHHHHHHHHHHHHHHHTCCBEEEECCE
T ss_pred CCCccchhhHHHHHHHHHHhCCccEEec-c---ccccCc----cccccCCCcchHHHHHHHHHHHHHHcCCCeEEEEece
Confidence 99864 467889999998 7 899983 3 454321 12222222 2346899999999999999999999999
Q ss_pred eeCCCCCCChHHHHHH---HHHcCCCcccCCCCceeEEEEEEE
Q 029198 154 IYGPLNYNPVEEWFFH---RLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 154 i~g~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
++++. ...+.. ....++.+.++++++..++|+|++
T Consensus 156 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (321)
T 3c1o_A 156 FGAYF-----VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEE 193 (321)
T ss_dssp EHHHH-----HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHH
T ss_pred ecccc-----ccccccccccccccCceEEecCCCcceeEeeHH
Confidence 88761 222222 112445566777888888887653
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.5e-21 Score=147.13 Aligned_cols=138 Identities=22% Similarity=0.275 Sum_probs=111.8
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|+++| ++|++++|++++... ..+. ..+++++.+|+.|++++.++++ ++|+|||+
T Consensus 11 tGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~-------~~l~--~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~ 79 (299)
T 2wm3_A 11 FGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA-------KELR--LQGAEVVQGDQDDQVIMELALN--GAYATFIV 79 (299)
T ss_dssp ETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH-------HHHH--HTTCEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred ECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH-------HHHH--HCCCEEEEecCCCHHHHHHHHh--cCCEEEEe
Confidence 7999999999999999999 999999998765210 0011 2468999999999999999998 89999999
Q ss_pred cCCC--------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhcCCcEEE
Q 029198 80 NGRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTS 148 (197)
Q Consensus 80 a~~~--------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~~i 148 (197)
++.. ...+++++++++ ++++||++|+.++|+.... .+...| .+|..+|.++++.++++++
T Consensus 80 a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~---------~~~~~y~~sK~~~e~~~~~~gi~~~i 150 (299)
T 2wm3_A 80 TNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG---------RLAAAHFDGKGEVEEYFRDIGVPMTS 150 (299)
T ss_dssp CCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT---------SCCCHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC---------cccCchhhHHHHHHHHHHHCCCCEEE
Confidence 9742 235678899887 8899999888888764321 122345 9999999999999999999
Q ss_pred EccceeeCCC
Q 029198 149 LRPVYIYGPL 158 (197)
Q Consensus 149 ~r~~~i~g~~ 158 (197)
+||+++||+.
T Consensus 151 lrp~~~~~~~ 160 (299)
T 2wm3_A 151 VRLPCYFENL 160 (299)
T ss_dssp EECCEEGGGG
T ss_pred EeecHHhhhc
Confidence 9999999974
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-21 Score=142.31 Aligned_cols=127 Identities=18% Similarity=0.180 Sum_probs=107.2
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||||++|++++++|+++|+ +|++++|++.+ . ..+++++.+|+.|++++.+++ +|+|||
T Consensus 11 tGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-~--------------~~~~~~~~~D~~~~~~~~~~~----~d~vi~ 71 (215)
T 2a35_A 11 AGATGLTGEHLLDRILSEPTLAKVIAPARKALA-E--------------HPRLDNPVGPLAELLPQLDGS----IDTAFC 71 (215)
T ss_dssp ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-C--------------CTTEECCBSCHHHHGGGCCSC----CSEEEE
T ss_pred ECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-c--------------CCCceEEeccccCHHHHHHhh----hcEEEE
Confidence 69999999999999999998 99999998765 1 146788899999888777666 999999
Q ss_pred ccCCCc--------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhh
Q 029198 79 INGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (197)
Q Consensus 79 ~a~~~~--------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~ 141 (197)
+++... .++.+++++++ +.++||++||..+|+. +...| .+|..+|.++++
T Consensus 72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------------~~~~y~~sK~~~e~~~~~ 138 (215)
T 2a35_A 72 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQE 138 (215)
T ss_dssp CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHTT
T ss_pred CeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-------------CccHHHHHHHHHHHHHHH
Confidence 998742 24667888877 7789999999988752 23467 999999999999
Q ss_pred cCCc-EEEEccceeeCCCC
Q 029198 142 KGVN-WTSLRPVYIYGPLN 159 (197)
Q Consensus 142 ~~~~-~~i~r~~~i~g~~~ 159 (197)
.+++ ++++||+++||+..
T Consensus 139 ~~~~~~~~vrp~~v~g~~~ 157 (215)
T 2a35_A 139 QGWPQLTIARPSLLFGPRE 157 (215)
T ss_dssp SCCSEEEEEECCSEESTTS
T ss_pred cCCCeEEEEeCceeeCCCC
Confidence 9999 99999999999964
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=139.39 Aligned_cols=136 Identities=15% Similarity=0.151 Sum_probs=108.6
Q ss_pred CCcccchHHHHHHHHHHC--CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||+|++|++++++|+++ |++|++++|++++.... ..++.++.+|+.|++++.++++ ++|+|||
T Consensus 10 tGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~------------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~ 75 (253)
T 1xq6_A 10 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI------------GGEADVFIGDITDADSINPAFQ--GIDALVI 75 (253)
T ss_dssp ESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT------------TCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred EcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc------------CCCeeEEEecCCCHHHHHHHHc--CCCEEEE
Confidence 799999999999999999 89999999976442111 2467899999999999999998 8999999
Q ss_pred ccCCCc-----------------------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCC--
Q 029198 79 INGREA-----------------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-- 125 (197)
Q Consensus 79 ~a~~~~-----------------------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-- 125 (197)
+++... .++.+++++++ +.++||++||..++... .+..+
T Consensus 76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~--------~~~~~~~ 147 (253)
T 1xq6_A 76 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPD--------HPLNKLG 147 (253)
T ss_dssp CCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTT--------CGGGGGG
T ss_pred eccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCC--------Ccccccc
Confidence 998531 12567888887 78899999998765211 11111
Q ss_pred CCcc-hhhhhHHHHHhhcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|..+|.+++..+++++++||+++||+.
T Consensus 148 ~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~ 181 (253)
T 1xq6_A 148 NGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKE 181 (253)
T ss_dssp GCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSC
T ss_pred chhHHHHHHHHHHHHHhCCCceEEEecceeecCC
Confidence 1234 68999999999999999999999999985
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-18 Score=128.66 Aligned_cols=142 Identities=11% Similarity=0.097 Sum_probs=103.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... .++.....++.++.+|+.|++++.++++.. ++|+
T Consensus 17 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 91 (255)
T 1fmc_A 17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHVV-----DEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI 91 (255)
T ss_dssp TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999865421110 111222357889999999999998887632 7999
Q ss_pred EEeccCCCcc-------------------ch----HHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREAD-------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~-------------------~~----~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
|||+|+.... ++ +.++..++ +..+||++||...+... .+...|
T Consensus 92 vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~ 160 (255)
T 1fmc_A 92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN-----------INMTSYA 160 (255)
T ss_dssp EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----------TTCHHHH
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----------CCCcccH
Confidence 9999986421 12 22333333 56899999998776421 123457
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++++|||+++++.
T Consensus 161 ~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~ 196 (255)
T 1fmc_A 161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA 196 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchh
Confidence 89999988753 248999999999999874
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.75 E-value=8.5e-18 Score=126.61 Aligned_cols=139 Identities=18% Similarity=0.158 Sum_probs=106.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+.+..... ..+...++.++.+|+.|++++.++++.. ++|+
T Consensus 11 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 82 (281)
T 3m1a_A 11 TGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDL--------VAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV 82 (281)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH--------HHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 79999999999999999999999999986653211 1122357899999999999998887643 7999
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||.... + ++.+++.++ +..+||++||...+.. ..+...|
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y 151 (281)
T 3m1a_A 83 LVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS-----------FAGFSAY 151 (281)
T ss_dssp EEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTCHHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC-----------CCCchHH
Confidence 9999986321 1 455666666 6789999999776421 1234457
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++++++++||++.++.
T Consensus 152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (281)
T 3m1a_A 152 SATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNL 188 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccccc
Confidence 99999988753 368999999999998874
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.6e-18 Score=126.44 Aligned_cols=142 Identities=15% Similarity=0.255 Sum_probs=103.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhh-hhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+ .....++.++.+|+.|++++.++++.. ++|
T Consensus 8 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (250)
T 2cfc_A 8 TGASSGNGLAIATRFLARGDRVAALDLSAETLEETA-----RTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAID 82 (250)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 799999999999999999999999999865422110 001 111346899999999999998887642 799
Q ss_pred EEEeccCCCccc---------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREADE---------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 75 ~vi~~a~~~~~~---------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
+|||+||..... ++.+++.++ +..+||++||...+... .+
T Consensus 83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~ 151 (250)
T 2cfc_A 83 VLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF-----------PG 151 (250)
T ss_dssp EEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TT
T ss_pred EEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-----------CC
Confidence 999999863210 133445554 66899999997765321 12
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ ..+++++++|||+++++.
T Consensus 152 ~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 192 (250)
T 2cfc_A 152 RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPM 192 (250)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCc
Confidence 3356 89999988753 248999999999999985
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.73 E-value=7.6e-18 Score=125.85 Aligned_cols=142 Identities=15% Similarity=0.141 Sum_probs=95.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc------cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~------~~~d 74 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+.....++.++.+|+.|+++++++++. .++|
T Consensus 20 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 94 (266)
T 1xq1_A 20 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-----SKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD 94 (266)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence 799999999999999999999999999765422110 11112234688999999999998888753 3799
Q ss_pred EEEeccCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~~~~ll~~~----~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+|||+||.... ++.++++++ + +..+||++||...+... .+...
T Consensus 95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~ 163 (266)
T 1xq1_A 95 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA-----------SVGSI 163 (266)
T ss_dssp EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------CCH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC-----------CCCch
Confidence 99999986321 122344443 3 67899999997765321 12345
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++++|||+++++.
T Consensus 164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 201 (266)
T 1xq1_A 164 YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL 201 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---
T ss_pred HHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccch
Confidence 6 89999888763 258999999999999985
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.1e-18 Score=125.91 Aligned_cols=145 Identities=13% Similarity=0.202 Sum_probs=103.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+.....++.++.+|+.|++++.++++.. ++|+
T Consensus 19 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 93 (260)
T 3awd_A 19 TGGAQNIGLACVTALAEAGARVIIADLDEAMATKAV-----EDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDI 93 (260)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865421110 111122356899999999999998887642 7999
Q ss_pred EEeccCCCc-c--------------------ch----HHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREA-D--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~-~--------------------~~----~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+||... . ++ +.+++.++ +..+||++||...+... +..+...
T Consensus 94 vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~~~~~~ 164 (260)
T 3awd_A 94 LVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN---------RPQQQAA 164 (260)
T ss_dssp EEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSCCHH
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC---------CCCCccc
Confidence 999998643 1 01 22233333 56799999997654221 1112345
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~~ 159 (197)
| .+|...+.+.+ ..+++++++|||+++++..
T Consensus 165 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~ 203 (260)
T 3awd_A 165 YNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLT 203 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchh
Confidence 7 89999988763 2689999999999999853
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=1e-17 Score=124.26 Aligned_cols=139 Identities=13% Similarity=0.126 Sum_probs=93.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... .++.+...++.++.+|+.|++++.++++.. ++|+
T Consensus 15 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 89 (253)
T 3qiv_A 15 TGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVA-----KQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDY 89 (253)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865532111 122223457899999999999998887643 8999
Q ss_pred EEeccCCCc---c--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREA---D--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 76 vi~~a~~~~---~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 126 (197)
|||+||... . + ++.++..++ +..+||++||...|. +.
T Consensus 90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------~~ 155 (253)
T 3qiv_A 90 LVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL--------------YS 155 (253)
T ss_dssp EEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------
T ss_pred EEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC--------------CC
Confidence 999998721 0 0 334455554 567899999987762 12
Q ss_pred Ccc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
..| .+|...+.+.+ ..+++++.++||+++++.
T Consensus 156 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 195 (253)
T 3qiv_A 156 NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEA 195 (253)
T ss_dssp ----CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccc
Confidence 346 88998887653 258999999999999875
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.8e-17 Score=120.14 Aligned_cols=135 Identities=18% Similarity=0.138 Sum_probs=102.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.+... ..++.++.+|+.|++++.++++.. ++|+
T Consensus 34 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 99 (260)
T 3un1_A 34 TGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA--------------DPDIHTVAGDISKPETADRIVREGIERFGRIDS 99 (260)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS--------------STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc--------------cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence 799999999999999999999999999866522 136889999999999998887643 7999
Q ss_pred EEeccCCCcc--------------------chHHHH----HhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------EVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll----~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||.... ++..++ ..++ +..++|++||...+.... ..+...|
T Consensus 100 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------~~~~~~Y 170 (260)
T 3un1_A 100 LVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMV---------GMPSALA 170 (260)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBT---------TCCCHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCC---------CCccHHH
Confidence 9999987421 122233 3333 567999999976643211 1233456
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..|+++++++||+++++.
T Consensus 171 ~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 207 (260)
T 3un1_A 171 SLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPM 207 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCC
Confidence 78999888753 248999999999999985
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.9e-17 Score=122.46 Aligned_cols=162 Identities=18% Similarity=0.215 Sum_probs=111.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|......... ...+.....++.++.+|+.|+++++++++.. ++|+
T Consensus 10 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 85 (246)
T 3osu_A 10 TGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAV----VEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDV 85 (246)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 899999999999999999999999988653321111 0112223457889999999999998887643 7999
Q ss_pred EEeccCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~----~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||.... ++.+++++ ++ +..+||++||...+... .+...|
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 154 (246)
T 3osu_A 86 LVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN-----------PGQANY 154 (246)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTCHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----------CCChHH
Confidence 9999997421 12223333 33 56799999997654321 123357
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcc
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 178 (197)
.+|...+.+.+ ..+++++.++||++.++... .+.......+....++.
T Consensus 155 ~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~-~~~~~~~~~~~~~~p~~ 210 (246)
T 3osu_A 155 VATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD-ALSDELKEQMLTQIPLA 210 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCS-CSCHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccc-ccCHHHHHHHHhcCCCC
Confidence 89998887653 46899999999999998532 23344444444444433
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-17 Score=121.40 Aligned_cols=138 Identities=15% Similarity=0.110 Sum_probs=101.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||+|++|.+++++|+++|++|++++|+++.... ..+...+++++.+|+.|++++.++++.. ++|+|||+
T Consensus 13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 1cyd_A 13 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVS---------LAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN 83 (244)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence 7999999999999999999999999997654211 1111235677899999999999998743 58999999
Q ss_pred cCCCcc--------------------chHH----HHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hh
Q 029198 80 NGREAD--------------------EVEP----ILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG 131 (197)
Q Consensus 80 a~~~~~--------------------~~~~----ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~ 131 (197)
||.... ++.+ +++.++ + ..+||++||...+... .+...| .+
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~s 152 (244)
T 1cyd_A 84 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-----------PNLITYSST 152 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------TTBHHHHHH
T ss_pred CcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC-----------CCcchhHHH
Confidence 985321 1222 333333 3 5799999998776431 123356 89
Q ss_pred hhhHHHHHhh-------cCCcEEEEccceeeCCC
Q 029198 132 KLNTESVLES-------KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 132 k~~~e~~~~~-------~~~~~~i~r~~~i~g~~ 158 (197)
|...+.+.+. .+++++++|||+++++.
T Consensus 153 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~ 186 (244)
T 1cyd_A 153 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM 186 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHH
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence 9999887632 58999999999999874
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.7e-18 Score=125.49 Aligned_cols=140 Identities=21% Similarity=0.209 Sum_probs=101.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc--CccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~--~~d~vi~ 78 (197)
|||+|++|++++++|+++|++|++++|++++... .+.+|+.|.+++.++++.. ++|+|||
T Consensus 7 tGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------------~~~~D~~~~~~~~~~~~~~~~~~d~vi~ 68 (255)
T 2dkn_A 7 TGSASGIGAALKELLARAGHTVIGIDRGQADIEA------------------DLSTPGGRETAVAAVLDRCGGVLDGLVC 68 (255)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------------CTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred eCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc------------------cccCCcccHHHHHHHHHHcCCCccEEEE
Confidence 7999999999999999999999999998665211 1568999999998888643 8999999
Q ss_pred ccCCCc-c------------chHHHHHh----CC--CCCcEEEEecceecccCCCCC-C-------CCCC-------CCC
Q 029198 79 INGREA-D------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLP-H-------CETD-------TVD 124 (197)
Q Consensus 79 ~a~~~~-~------------~~~~ll~~----~~--~~~~~v~~Ss~~vyg~~~~~~-~-------~e~~-------~~~ 124 (197)
+|+... . ++.+++++ ++ +.+++|++||..+|+...... . +++. ...
T Consensus 69 ~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (255)
T 2dkn_A 69 CAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ 148 (255)
T ss_dssp CCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCC
Confidence 998753 1 23344443 33 458999999998886431100 0 0000 012
Q ss_pred CCCcc-hhhhhHHHHHhh-------cCCcEEEEccceeeCCC
Q 029198 125 PKSRH-KGKLNTESVLES-------KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~~-------~~~~~~i~r~~~i~g~~ 158 (197)
+...| .+|...|.+++. .+++++++|||+++++.
T Consensus 149 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~ 190 (255)
T 2dkn_A 149 THLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPL 190 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchh
Confidence 33457 899999887642 58999999999999973
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.3e-17 Score=122.99 Aligned_cols=139 Identities=17% Similarity=0.171 Sum_probs=103.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++++.... ..+....+.++.+|+.|++++.++++.. ++|+
T Consensus 13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 84 (260)
T 1nff_A 13 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM--------AAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 84 (260)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986542211 0111235788999999999998887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||..... ++.+++.++ +..+||++||...+... .+...|
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 153 (260)
T 1nff_A 85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-----------VACHGY 153 (260)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC-----------CCchhH
Confidence 99999864211 244555555 66899999998765321 123346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++++|||+++++.
T Consensus 154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 190 (260)
T 1nff_A 154 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 190 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGG
T ss_pred HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCc
Confidence 89999887653 368999999999999874
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-17 Score=124.56 Aligned_cols=142 Identities=15% Similarity=0.162 Sum_probs=103.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc-cCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|++|.+++++|+++|++|++++|++++..... ..+... ..++.++.+|+.|++++.++++.. ++|
T Consensus 13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 87 (263)
T 3ai3_A 13 TGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAA-----RSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGAD 87 (263)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999865421110 111111 346889999999999998887643 799
Q ss_pred EEEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+|||+||.... + ++.++..++ +..+||++||...+... .+...
T Consensus 88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 156 (263)
T 3ai3_A 88 ILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL-----------WYEPI 156 (263)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----------CCcch
Confidence 99999986421 1 233444444 56899999998776421 12234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..++++++++||+++++.
T Consensus 157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 194 (263)
T 3ai3_A 157 YNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPD 194 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 6 89999887653 368999999999999974
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.7e-17 Score=122.01 Aligned_cols=141 Identities=15% Similarity=0.198 Sum_probs=103.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCce-EEEeecCCCHHHHHhhhhc----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSA----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~l~~~~~~----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++++.... ..+...++ .++.+|+.|++++.++++. .++|+
T Consensus 17 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~ 88 (254)
T 2wsb_A 17 TGAGSGIGLEICRAFAASGARLILIDREAAALDRA--------AQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI 88 (254)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence 79999999999999999999999999986542111 01112355 8899999999999888753 37999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||..... ++.+++.++ +..+||++||...+... +..+...|
T Consensus 89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~~~~Y 159 (254)
T 2wsb_A 89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---------RPQFASSY 159 (254)
T ss_dssp EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSCBHHH
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------CCCcchHH
Confidence 99999864211 233444444 67899999998765321 11223457
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++++|||+++++.
T Consensus 160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~ 196 (254)
T 2wsb_A 160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEM 196 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchh
Confidence 89999988753 248999999999999874
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=3e-17 Score=121.87 Aligned_cols=138 Identities=19% Similarity=0.248 Sum_probs=103.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++..... ..+...++.++.+|+.|+++++++++.. ++|+
T Consensus 12 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (253)
T 1hxh_A 12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL--------AAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH--------HHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999976542110 0111346889999999999998887642 6899
Q ss_pred EEeccCCCcc------------------------chHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~------------------------~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||.... .++.++..++ + .+||++||...+... .+...|
T Consensus 84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------~~~~~Y 151 (253)
T 1hxh_A 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI-----------EQYAGY 151 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC-----------TTBHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCC-----------CCCccH
Confidence 9999986421 1344556665 5 899999998765321 123346
Q ss_pred -hhhhhHHHHHhh-------c--CCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLES-------K--GVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~~-------~--~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+. . +++++++|||+++++.
T Consensus 152 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~ 190 (253)
T 1hxh_A 152 SASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM 190 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCch
Confidence 899998877542 3 8999999999999873
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.8e-17 Score=121.37 Aligned_cols=143 Identities=18% Similarity=0.191 Sum_probs=101.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecC-CCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|++|.+++++|+++|++|++++|+ ++...... .++.....++.++.+|+.|+++++++++.. ++|
T Consensus 13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 87 (258)
T 3afn_B 13 TGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETI-----ASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGID 87 (258)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHH-----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 7999999999999999999999999998 44321110 111122357899999999999998887643 799
Q ss_pred EEEeccCC-Ccc--------------------ch----HHHHHhCC--C--C---CcEEEEecceecccCCCCCCCCCCC
Q 029198 75 VVYDINGR-EAD--------------------EV----EPILDALP--N--L---EQFIYCSSAGVYLKSDLLPHCETDT 122 (197)
Q Consensus 75 ~vi~~a~~-~~~--------------------~~----~~ll~~~~--~--~---~~~v~~Ss~~vyg~~~~~~~~e~~~ 122 (197)
+|||+||. ... ++ +.++..++ + . .+||++||...+...
T Consensus 88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 157 (258)
T 3afn_B 88 VLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG---------- 157 (258)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC----------
T ss_pred EEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC----------
Confidence 99999986 211 01 11222332 2 2 789999997665311
Q ss_pred CCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
..+...| .+|...+.+.+ ..+++++++|||+++++.
T Consensus 158 ~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~ 201 (258)
T 3afn_B 158 GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAF 201 (258)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGG
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccc
Confidence 1123457 89999988753 248999999999999985
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.71 E-value=3.5e-17 Score=121.17 Aligned_cols=141 Identities=19% Similarity=0.206 Sum_probs=103.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+ ....++.++.+|+.|++++.++++.. ++|+
T Consensus 12 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (251)
T 1zk4_A 12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAA-----KSV-GTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85 (251)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHH-CCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHh-hccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999765421110 000 01146899999999999998887642 5999
Q ss_pred EEeccCCCcc------------------------chHHHHHhCC--CC-CcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD------------------------EVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~------------------------~~~~ll~~~~--~~-~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+||.... .++.+++.++ +. .+||++||...+... .+...
T Consensus 86 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~ 154 (251)
T 1zk4_A 86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD-----------PSLGA 154 (251)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC-----------CCCcc
Confidence 9999986421 1334566665 45 799999998765321 12335
Q ss_pred c-hhhhhHHHHHh---------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~---------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++++|||+++++.
T Consensus 155 Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~ 194 (251)
T 1zk4_A 155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL 194 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred chHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchh
Confidence 6 89999887653 468999999999999873
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.5e-16 Score=119.20 Aligned_cols=140 Identities=19% Similarity=0.164 Sum_probs=104.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++..... ..+...++.++.+|+.|++++.++++.. ++|+
T Consensus 17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 88 (271)
T 3tzq_B 17 TGACGGIGLETSRVLARAGARVVLADLPETDLAGA--------AASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI 88 (271)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHH--------HHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--------HHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987653211 1122457889999999999998887643 7999
Q ss_pred EEeccCCCcc----------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~----------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+||+||.... + ++.++..++ +..+||++||...+... .+..
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~ 157 (271)
T 3tzq_B 89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAY-----------DMST 157 (271)
T ss_dssp EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBC-----------SSCH
T ss_pred EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCC-----------CCCh
Confidence 9999997511 0 122333334 56799999997765321 1233
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~~ 159 (197)
.| .+|...+.+.+ ..+++++.++||+++++..
T Consensus 158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~ 197 (271)
T 3tzq_B 158 AYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRL 197 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccc
Confidence 57 89999987653 3689999999999999853
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.9e-17 Score=118.82 Aligned_cols=138 Identities=17% Similarity=0.145 Sum_probs=97.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++.... ......++.++.+|+.|.+++.++++.. ++|+
T Consensus 11 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (234)
T 2ehd_A 11 TGASRGIGEATARLLHAKGYRVGLMARDEKRLQA---------LAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSA 81 (234)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999997554211 1111136889999999999988877642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||..... ++.+++.++ +..+||++||...+... .+...|
T Consensus 82 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y 150 (234)
T 2ehd_A 82 LVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF-----------KGGAAY 150 (234)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC-----------TTCHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC-----------CCCchh
Confidence 99999864211 234555554 56899999997765321 123356
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++++|||++..+.
T Consensus 151 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 187 (234)
T 2ehd_A 151 NASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGF 187 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------
T ss_pred hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence 89998877642 368999999999998763
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=5.1e-17 Score=120.14 Aligned_cols=138 Identities=14% Similarity=0.135 Sum_probs=102.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||+|++|.+++++|+++|++|++++|++++..... + ..++.++.+|+.|+++++++.+.. ++|+|||+
T Consensus 12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---------~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~ 81 (246)
T 2ag5_A 12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQELE---------K-YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV 81 (246)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG---------G-STTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---------h-ccCceEEEeeCCCHHHHHHHHHHhCCCCEEEEC
Confidence 799999999999999999999999999865422111 1 136889999999999998776543 79999999
Q ss_pred cCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhh
Q 029198 80 NGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK 132 (197)
Q Consensus 80 a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k 132 (197)
||..... ++.++..++ +..+||++||...+.... .+...| .+|
T Consensus 82 Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~~Y~~sK 151 (246)
T 2ag5_A 82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV----------VNRCVYSTTK 151 (246)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC----------TTBHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC----------CCCccHHHHH
Confidence 9864221 222333343 567999999976643211 123346 899
Q ss_pred hhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 133 LNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 133 ~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...+.+.+ ..+++++++|||+++++.
T Consensus 152 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 184 (246)
T 2ag5_A 152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS 184 (246)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcc
Confidence 99988764 358999999999999973
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.70 E-value=5.3e-17 Score=120.64 Aligned_cols=140 Identities=20% Similarity=0.269 Sum_probs=103.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++.. . ...+.....++.++.+|+.|++++.++++.. ++|+
T Consensus 10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~--~-----~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (255)
T 2q2v_A 10 TGSTSGIGLGIAQVLARAGANIVLNGFGDPAP--A-----LAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI 82 (255)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-----HHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH--H-----HHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999976510 0 0111112346888999999999998887643 7999
Q ss_pred EEeccCCCcc------------------------chHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~------------------------~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||.... .++.++..++ +..+||++||...+... .+...|
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 151 (255)
T 2q2v_A 83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS-----------TGKAAY 151 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTBHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC-----------CCchhH
Confidence 9999986421 1334555555 56899999997765321 122346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++++++++||+++++.
T Consensus 152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (255)
T 2q2v_A 152 VAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPL 188 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcc
Confidence 89999887653 358999999999999873
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=6.3e-17 Score=120.49 Aligned_cols=142 Identities=18% Similarity=0.169 Sum_probs=100.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEec-CCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|++|.+++++|+++|++|++++| +++...... ..+.....++.++.+|+.|++++.++++.. ++|
T Consensus 13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 87 (261)
T 1gee_A 13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVL-----EEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD 87 (261)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999 433211100 111122346889999999999988887643 799
Q ss_pred EEEeccCCCcc--------------------c----hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+|||+||.... + ++.+++.++ + ..+||++||...+.. ..+..
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~ 156 (261)
T 1gee_A 88 VMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP-----------WPLFV 156 (261)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----------CTTCH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC-----------CCCcc
Confidence 99999986421 0 122333343 3 579999999765421 12234
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..+++++++|||+++++.
T Consensus 157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 195 (261)
T 1gee_A 157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI 195 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGG
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCch
Confidence 57 89988877653 358999999999999974
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.3e-16 Score=116.90 Aligned_cols=132 Identities=15% Similarity=0.069 Sum_probs=97.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++.. . .++.++.+|+.|++++.++++.. ++|+
T Consensus 13 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-----~----------~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~ 77 (250)
T 2fwm_X 13 TGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-----Q----------YPFATEVMDVADAAQVAQVCQRLLAETERLDA 77 (250)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS-----C----------CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh-----c----------CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986530 0 12788899999999998887642 7999
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||.... + ++.++..++ +..+||++||...+... .+...|
T Consensus 78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 146 (250)
T 2fwm_X 78 LVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR-----------IGMSAY 146 (250)
T ss_dssp EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----------TTCHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-----------CCCchH
Confidence 9999986421 1 122333334 56899999997765311 123346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++++++++||+++++.
T Consensus 147 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 183 (250)
T 2fwm_X 147 GASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDM 183 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcc
Confidence 89999988753 358999999999999874
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=8.1e-17 Score=119.27 Aligned_cols=139 Identities=14% Similarity=0.174 Sum_probs=100.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCC-CCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
|||+|++|.+++++|+++|++|++++|++ +.... .+.+...++.++.+|+.|+++++++++. -++|
T Consensus 13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 13 TGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA--------AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH--------HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH--------HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 79999999999999999999999999987 33211 1122235688999999999999887653 2799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+|||+||..... ++.++..++ +..+||++||...+... .+...
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 153 (249)
T 2ew8_A 85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI-----------EAYTH 153 (249)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC-----------SSCHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC-----------CCchh
Confidence 999999864211 233444454 56899999998776321 12334
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..++++++++||++.++.
T Consensus 154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 191 (249)
T 2ew8_A 154 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT 191 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCcc
Confidence 6 89999887653 358999999999998874
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=4e-17 Score=120.41 Aligned_cols=142 Identities=15% Similarity=0.165 Sum_probs=103.1
Q ss_pred CCcccchHHHHHHHHHHCCC-------eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc--
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-- 71 (197)
|||+|++|.+++++|+++|+ +|++++|+++...... .++.....++.++.+|+.|++++.++++..
T Consensus 8 TGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (244)
T 2bd0_A 8 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKIS-----LECRAEGALTDTITADISDMADVRRLTTHIVE 82 (244)
T ss_dssp ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHH-----HHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHH-----HHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence 79999999999999999999 9999999764421110 111112356899999999999998887632
Q ss_pred ---CccEEEeccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCC
Q 029198 72 ---GFDVVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT 122 (197)
Q Consensus 72 ---~~d~vi~~a~~~~~--------------------~~----~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 122 (197)
++|+|||+||.... ++ +.++..++ +..+||++||...+...
T Consensus 83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 152 (244)
T 2bd0_A 83 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF---------- 152 (244)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred hCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC----------
Confidence 79999999986421 12 22333333 56899999998776321
Q ss_pred CCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+...| .+|...+.+.+ ..+++++++|||+++++.
T Consensus 153 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 195 (244)
T 2bd0_A 153 -RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM 195 (244)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchh
Confidence 123456 89999887652 368999999999999985
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.4e-17 Score=122.56 Aligned_cols=143 Identities=18% Similarity=0.189 Sum_probs=103.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhcc-CceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|+||.+++++|+++|++|++++|+.+...... .++.+.. .++.++.+|+.|++++.++++.. ++|
T Consensus 47 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 121 (293)
T 3rih_A 47 TGGTKGIGRGIATVFARAGANVAVAARSPRELSSVT-----AELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALD 121 (293)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 899999999999999999999999999876532211 1111112 47899999999999988887643 799
Q ss_pred EEEeccCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~~~~ll~~~----~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+|||+||.... ++..+++++ + +..+||++||...+.. ...+...
T Consensus 122 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~----------~~~~~~~ 191 (293)
T 3rih_A 122 VVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT----------GYPGWSH 191 (293)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB----------BCTTCHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC----------CCCCCHH
Confidence 99999987421 122344443 3 6689999999664210 0112335
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..|++++.++||+++++.
T Consensus 192 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 229 (293)
T 3rih_A 192 YGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEG 229 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcc
Confidence 7 89999887653 368999999999999873
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-16 Score=119.70 Aligned_cols=136 Identities=18% Similarity=0.184 Sum_probs=103.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.+...... ...+.++.+|+.|.+++.++++.. ++|+
T Consensus 22 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 90 (266)
T 3p19_A 22 TGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-----------LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADA 90 (266)
T ss_dssp ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-----------CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-----------cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence 799999999999999999999999999866533221 136889999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||..... ++.++..++ +..+||++||...+... .+...|
T Consensus 91 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-----------~~~~~Y 159 (266)
T 3p19_A 91 IVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF-----------PDHAAY 159 (266)
T ss_dssp EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----------TTCHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC-----------CCCchH
Confidence 99999974211 233455554 66899999997765321 122346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||++.++.
T Consensus 160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 196 (266)
T 3p19_A 160 CGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTEL 196 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccch
Confidence 89999887653 368999999999999874
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=7.1e-17 Score=119.93 Aligned_cols=138 Identities=17% Similarity=0.141 Sum_probs=103.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... .+...++.++.+|+.|++++.++++.. ++|+
T Consensus 11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (254)
T 1hdc_A 11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAATA--------RELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865422110 111246888999999999998887632 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||..... ++.+++.++ +..+||++||...+... .+...|
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 151 (254)
T 1hdc_A 83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL-----------ALTSSY 151 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-----------CCchhH
Confidence 99999864210 234566665 56899999997765321 123346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..++++++++||+++++
T Consensus 152 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 187 (254)
T 1hdc_A 152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP 187 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCc
Confidence 89999887653 35899999999999876
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-16 Score=117.40 Aligned_cols=138 Identities=14% Similarity=0.115 Sum_probs=101.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||+|++|.+++++|+++|++|++++|++++... +.+...+..++.+|+.|++++.++++.. ++|+|||+
T Consensus 13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 3d3w_A 13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDS---------LVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence 7999999999999999999999999997644211 1111135677899999999999998743 58999999
Q ss_pred cCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hh
Q 029198 80 NGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG 131 (197)
Q Consensus 80 a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~ 131 (197)
||..... ++.++..++ + ..+||++||...+... .+...| .+
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~s 152 (244)
T 3d3w_A 84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV-----------TNHSVYCST 152 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------TTBHHHHHH
T ss_pred CccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC-----------CCCchHHHH
Confidence 9864211 122333333 3 6789999997765321 123457 89
Q ss_pred hhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 132 k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
|...|.+.+ ..++++++++||+++++.
T Consensus 153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~ 186 (244)
T 3d3w_A 153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM 186 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTT
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEeccccccc
Confidence 999998763 258999999999999874
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.6e-16 Score=117.53 Aligned_cols=130 Identities=19% Similarity=0.182 Sum_probs=99.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++. ..++.++.+|+.|++++.++++.. ++|+
T Consensus 14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~ 77 (264)
T 2dtx_A 14 TGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISV 77 (264)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998654 146788999999999998887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||..... ++.++..++ +..+||++||...+... .+...|
T Consensus 78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 146 (264)
T 2dtx_A 78 LVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT-----------KNASAY 146 (264)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC-----------TTBHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC-----------CCchhH
Confidence 99999864211 333455554 56799999998765321 123356
Q ss_pred -hhhhhHHHHHhh----cC--CcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLES----KG--VNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~~----~~--~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+. .+ +++++++||++.++
T Consensus 147 ~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~ 181 (264)
T 2dtx_A 147 VTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTP 181 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSH
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCc
Confidence 899999877532 11 99999999999876
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-16 Score=119.80 Aligned_cols=142 Identities=13% Similarity=0.186 Sum_probs=102.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+.+...... ..+ ....++.++.+|+.|++++.++++.. ++|+
T Consensus 22 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 95 (278)
T 2bgk_A 22 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC-----NNI-GSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI 95 (278)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHH-CCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHH-----HHh-CCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999754321100 000 11126899999999999998887642 7999
Q ss_pred EEeccCCCcc----------------------ch----HHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD----------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~----------------------~~----~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|||+||.... ++ +.++..++ +..+||++||...|.... .+..
T Consensus 96 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~ 165 (278)
T 2bgk_A 96 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE----------GVSH 165 (278)
T ss_dssp EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------TSCH
T ss_pred EEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC----------CCCc
Confidence 9999986421 11 22333333 467999999988764321 1233
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..+++++++|||+++++.
T Consensus 166 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 204 (278)
T 2bgk_A 166 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPL 204 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCC
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchh
Confidence 46 89999988763 358999999999999985
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=9.4e-17 Score=119.82 Aligned_cols=143 Identities=21% Similarity=0.236 Sum_probs=103.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhcc-CceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|+||.+++++|+++|++|++++|++++..... .++.... .++.++.+|+.|++++.++++.. ++|
T Consensus 16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 90 (262)
T 3pk0_A 16 TGGTKGIGRGIATVFARAGANVAVAGRSTADIDACV-----ADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGID 90 (262)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 799999999999999999999999999866532111 1111112 47899999999999998887643 799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
++||+||..... ++.++..++ +..+||++||...... ...+...
T Consensus 91 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~----------~~~~~~~ 160 (262)
T 3pk0_A 91 VVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT----------GYPGWSH 160 (262)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB----------CCTTCHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC----------CCCCChh
Confidence 999999964211 233444444 5679999999654200 0112335
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..|++++.++||+++++.
T Consensus 161 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 198 (262)
T 3pk0_A 161 YGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEG 198 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcc
Confidence 7 89999988753 368999999999999873
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.68 E-value=9.3e-17 Score=123.30 Aligned_cols=147 Identities=14% Similarity=0.062 Sum_probs=101.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++.+|+.....................++.++.+|++|++++.++++.. ++|+
T Consensus 11 TGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~ 90 (324)
T 3u9l_A 11 TGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDV 90 (324)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 89999999999999999999999999974331110000000111122357899999999999998888743 8999
Q ss_pred EEeccCCCcc--------------------chHH----HHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~----ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||.... ++.+ ++..++ +..++|++||...+.... .....|
T Consensus 91 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~----------~~~~~Y 160 (324)
T 3u9l_A 91 LIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP----------PYLAPY 160 (324)
T ss_dssp EEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC----------SSCHHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC----------CcchhH
Confidence 9999996421 1222 334444 668999999977653211 112346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..|+++++++||.+.++
T Consensus 161 ~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~ 196 (324)
T 3u9l_A 161 FAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSG 196 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccC
Confidence 99999988753 36899999999999865
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-16 Score=118.46 Aligned_cols=139 Identities=18% Similarity=0.144 Sum_probs=102.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.+..... ..+....+.++.+|+.|++++.++++.. ++|+
T Consensus 14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 14 TGSARGIGRAFAEAYVREGATVAIADIDIERARQA--------AAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999976543211 1122356889999999999998887643 7999
Q ss_pred EEeccCCCcc--------------------chHHHHHh----CC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~----~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+||.... ++.+++++ +. + ..+||++||...+... .+...
T Consensus 86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 154 (259)
T 4e6p_A 86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE-----------ALVAI 154 (259)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------TTBHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC-----------CCChH
Confidence 9999997421 12223333 32 2 4689999997765221 12334
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++.++||+++++.
T Consensus 155 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 192 (259)
T 4e6p_A 155 YCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEH 192 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTT
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccch
Confidence 7 89999988753 358999999999999984
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1e-16 Score=119.47 Aligned_cols=142 Identities=13% Similarity=0.143 Sum_probs=103.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... .++.....++.++.+|+.|++++.++++.. ++|+
T Consensus 20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 94 (260)
T 2zat_A 20 TASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTV-----ATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDI 94 (260)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865422110 111122346888999999999988877642 7999
Q ss_pred EEeccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+||.... + ++.++..++ +..+||++||...+... .+...
T Consensus 95 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 163 (260)
T 2zat_A 95 LVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF-----------PNLGP 163 (260)
T ss_dssp EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTBHH
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC-----------CCchh
Confidence 9999986320 0 123344444 56799999998776321 12335
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..++++++++||++.++.
T Consensus 164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 201 (260)
T 2zat_A 164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNF 201 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSST
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCcc
Confidence 6 89999888754 358999999999999874
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=9.3e-17 Score=120.53 Aligned_cols=142 Identities=16% Similarity=0.145 Sum_probs=101.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc------cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~------~~~d 74 (197)
|||+|++|.+++++|+++|++|++++|+++...... .++.....++.++.+|+.|++++.++++. -++|
T Consensus 27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id 101 (273)
T 1ae1_A 27 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL-----EIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN 101 (273)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCc
Confidence 799999999999999999999999999865422110 11112234688999999999998887752 3799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
++||+||..... ++.++..++ +..+||++||...+... .+...
T Consensus 102 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~ 170 (273)
T 1ae1_A 102 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL-----------PSVSL 170 (273)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC-----------TTCHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC-----------CCcch
Confidence 999999864211 122333333 56799999998776421 12334
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..++++++++||+++++.
T Consensus 171 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (273)
T 1ae1_A 171 YSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 208 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCch
Confidence 6 89999887653 358999999999999985
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-16 Score=114.10 Aligned_cols=123 Identities=11% Similarity=0.095 Sum_probs=95.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||+|++|++++++|+ +|++|++++|+++ .+.+|+.|+++++++++.. ++|+|||+
T Consensus 9 tGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ 65 (202)
T 3d7l_A 9 IGASGTLGSAVKERLE-KKAEVITAGRHSG----------------------DVTVDITNIDSIKKMYEQVGKVDAIVSA 65 (202)
T ss_dssp ETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------------SEECCTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred EcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------------ceeeecCCHHHHHHHHHHhCCCCEEEEC
Confidence 7999999999999999 9999999999743 3678999999999988743 59999999
Q ss_pred cCCCcc--------------------chHHHHHhCC-C---CCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhh
Q 029198 80 NGREAD--------------------EVEPILDALP-N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN 134 (197)
Q Consensus 80 a~~~~~--------------------~~~~ll~~~~-~---~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~ 134 (197)
||.... ++.++++++. . ..+||++||...+.. ..+...| .+|..
T Consensus 66 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~~ 134 (202)
T 3d7l_A 66 TGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP-----------IVQGASAAMANGA 134 (202)
T ss_dssp CCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC-----------CTTCHHHHHHHHH
T ss_pred CCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC-----------CCccHHHHHHHHH
Confidence 985321 2335566655 2 368999999765421 1123456 89999
Q ss_pred HHHHHhh------cCCcEEEEccceeeCC
Q 029198 135 TESVLES------KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 135 ~e~~~~~------~~~~~~i~r~~~i~g~ 157 (197)
.|.+.+. .+++++++|||+++++
T Consensus 135 ~~~~~~~~~~e~~~gi~v~~v~pg~v~~~ 163 (202)
T 3d7l_A 135 VTAFAKSAAIEMPRGIRINTVSPNVLEES 163 (202)
T ss_dssp HHHHHHHHTTSCSTTCEEEEEEECCBGGG
T ss_pred HHHHHHHHHHHccCCeEEEEEecCccCCc
Confidence 9987643 3899999999999987
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-16 Score=119.51 Aligned_cols=145 Identities=14% Similarity=0.220 Sum_probs=103.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.......+. ..+.+...++.++.+|+.|++++.++++.. ++|+
T Consensus 13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~ 88 (264)
T 3i4f_A 13 TAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMK----ETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDF 88 (264)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 8999999999999999999999999887654221111 111222357899999999999999888643 8999
Q ss_pred EEeccCCCc----------------------cch----HHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREA----------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~----------------------~~~----~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|||+||... .++ +.++..++ +..++|++||...++... ..+..
T Consensus 89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------~~~~~ 159 (264)
T 3i4f_A 89 LINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPG---------WIYRS 159 (264)
T ss_dssp EECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCC---------CTTCH
T ss_pred EEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCC---------CCCCc
Confidence 999999311 012 22333334 667999999875542211 11234
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..+++++.++||+++++.
T Consensus 160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 198 (264)
T 3i4f_A 160 AFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEM 198 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGG
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCcc
Confidence 57 89999887653 368999999999999874
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=7.9e-17 Score=120.04 Aligned_cols=141 Identities=14% Similarity=0.105 Sum_probs=101.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc------cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~------~~~d 74 (197)
|||+|++|.+++++|+++|++|++++|+++...... .++.....++.++.+|+.|+++++++++. .++|
T Consensus 15 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id 89 (260)
T 2ae2_A 15 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-----TQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN 89 (260)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Confidence 799999999999999999999999999865422110 11112234688999999999999888753 3799
Q ss_pred EEEeccCCCcc--------------------chHHH----HHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREAD--------------------EVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~~~~l----l~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+|||+||.... ++.++ +..++ +..+||++||...+... .+...
T Consensus 90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 158 (260)
T 2ae2_A 90 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV-----------PYEAV 158 (260)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC-----------TTCHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----------CCcch
Confidence 99999986421 11223 33333 56799999997764311 12234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..++++++++||++.++
T Consensus 159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 195 (260)
T 2ae2_A 159 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATS 195 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCc
Confidence 6 89999988763 35899999999999876
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=5.1e-17 Score=120.05 Aligned_cols=142 Identities=15% Similarity=0.175 Sum_probs=101.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+.. ...++.++.+|+.|++++.++++.. ++|
T Consensus 13 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 87 (248)
T 2pnf_A 13 TGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVA-----EEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGID 87 (248)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCS
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-----HHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 799999999999999999999999999755421100 01111 1346889999999999998887642 799
Q ss_pred EEEeccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~~----~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+|||+|+.... ++ +.+++.++ +..+||++||...+... .+...
T Consensus 88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~ 156 (248)
T 2pnf_A 88 ILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN-----------VGQVN 156 (248)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC-----------TTCHH
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC-----------CCCch
Confidence 99999986421 12 22333333 56899999997543211 11234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..++++++++||+++++.
T Consensus 157 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~ 194 (248)
T 2pnf_A 157 YSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDM 194 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCch
Confidence 6 88998887653 358999999999999874
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=8e-16 Score=115.84 Aligned_cols=148 Identities=16% Similarity=0.184 Sum_probs=105.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCc-------hhhhhccCceEEEeecCCCHHHHHhhhhcc--
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-- 71 (197)
|||+|+||.+++++|+++|++|++++|++............ ..+.....++.++.+|+.|++++.++++..
T Consensus 16 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (281)
T 3s55_A 16 TGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAED 95 (281)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 79999999999999999999999999985442111111000 111223457899999999999998887643
Q ss_pred ---CccEEEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCC
Q 029198 72 ---GFDVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT 122 (197)
Q Consensus 72 ---~~d~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 122 (197)
++|++||+||.... + ++.++..++ +..+||++||...+...
T Consensus 96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 165 (281)
T 3s55_A 96 TLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSAN---------- 165 (281)
T ss_dssp HHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC----------
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCC----------
Confidence 79999999997421 1 222333344 56799999997765321
Q ss_pred CCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCCC
Q 029198 123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~~ 159 (197)
.+...| .+|...+.+.+ ..|++++.++||+++++..
T Consensus 166 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 209 (281)
T 3s55_A 166 -FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMT 209 (281)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTT
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccc
Confidence 123357 89999887653 3689999999999999853
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-16 Score=118.35 Aligned_cols=139 Identities=15% Similarity=0.176 Sum_probs=100.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... .+...++.++.+|+.|++++.++++.. ++|+
T Consensus 18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~ 89 (263)
T 3ak4_A 18 TGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVV--------AGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL 89 (263)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865422110 111126788999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+||..... ++.++..++ + ..+||++||...+... .+...
T Consensus 90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 158 (263)
T 3ak4_A 90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA-----------PLLAH 158 (263)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----------TTCHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC-----------CCchh
Confidence 99999864211 122233333 3 5899999997764221 12334
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..++++++++||+++++.
T Consensus 159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 196 (263)
T 3ak4_A 159 YSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAM 196 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChh
Confidence 6 89999887653 358999999999999873
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-16 Score=119.79 Aligned_cols=141 Identities=18% Similarity=0.238 Sum_probs=103.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+.+. ..++.++.+|+.|++++.++++.. ++
T Consensus 19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 93 (267)
T 1iy8_A 19 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASK-----AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI 93 (267)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999865422110 111111 346889999999999998887643 79
Q ss_pred cEEEeccCCCcc-c------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD-E------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 74 d~vi~~a~~~~~-~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 126 (197)
|+|||+||.... . ++.+++.++ +..+||++||...+... .+.
T Consensus 94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~ 162 (267)
T 1iy8_A 94 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI-----------GNQ 162 (267)
T ss_dssp SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC-----------SSB
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC-----------CCC
Confidence 999999986422 1 234455555 66899999997764211 123
Q ss_pred Ccc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
..| .+|...+.+.+ ..++++++++||+++++
T Consensus 163 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 201 (267)
T 1iy8_A 163 SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTP 201 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCc
Confidence 346 89999887653 36899999999999886
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.67 E-value=5e-17 Score=119.86 Aligned_cols=142 Identities=13% Similarity=0.211 Sum_probs=100.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEE-ecCCCCccCCCCCCCchhhhhccCceEE-EeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILH-LKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+|++|.+++++|+++|++|+++ +|+++...... ..+.....++.. +.+|+.|.++++++++. .++
T Consensus 7 TGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 2ph3_A 7 TGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVA-----EEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL 81 (245)
T ss_dssp TTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHH-----HHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence 7999999999999999999999998 77654321100 111111235666 89999999998888653 279
Q ss_pred cEEEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|+|||+||.... + ++.+++.++ +..+||++||...+... .+..
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~ 150 (245)
T 2ph3_A 82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN-----------PGQA 150 (245)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------SSBH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC-----------CCCc
Confidence 999999986421 1 344555665 67899999997643211 1123
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..+++++++|||+++++.
T Consensus 151 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 189 (245)
T 2ph3_A 151 NYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEM 189 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcc
Confidence 46 88998887653 248999999999999874
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.7e-16 Score=115.65 Aligned_cols=130 Identities=15% Similarity=0.165 Sum_probs=98.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc----CccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~----~~d~v 76 (197)
|||+|++|.+++++|+++|++|++++|+++. .++.++.+|+.|++++.++++.. ++|+|
T Consensus 8 tGasggiG~~la~~l~~~G~~V~~~~r~~~~-----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l 70 (242)
T 1uay_A 8 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV 70 (242)
T ss_dssp ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEccCccc-----------------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence 7999999999999999999999999998651 24588999999999999888643 79999
Q ss_pred EeccCCCcc-------------c-----------hHHHHH----hCCC-----C---CcEEEEecceecccCCCCCCCCC
Q 029198 77 YDINGREAD-------------E-----------VEPILD----ALPN-----L---EQFIYCSSAGVYLKSDLLPHCET 120 (197)
Q Consensus 77 i~~a~~~~~-------------~-----------~~~ll~----~~~~-----~---~~~v~~Ss~~vyg~~~~~~~~e~ 120 (197)
||+|+.... . +.++++ .++. . .+||++||...+....
T Consensus 71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------- 143 (242)
T 1uay_A 71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI------- 143 (242)
T ss_dssp EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-------
T ss_pred EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC-------
Confidence 999986321 1 122333 2331 1 2899999988765321
Q ss_pred CCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+...| .+|...+.+.+ ..+++++++|||+++++.
T Consensus 144 ----~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 185 (242)
T 1uay_A 144 ----GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPL 185 (242)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHH
T ss_pred ----CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchh
Confidence 23456 88988887653 358999999999999874
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.9e-17 Score=120.96 Aligned_cols=141 Identities=13% Similarity=0.093 Sum_probs=103.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.+...... ..+.....++.++.+|+.|++++.++++.. ++|+
T Consensus 18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 92 (256)
T 3gaf_A 18 TGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVA-----AAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITV 92 (256)
T ss_dssp CSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 899999999999999999999999999865432111 122223467899999999999988887643 7999
Q ss_pred EEeccCCCccc-----------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREADE-----------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~~-----------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
+||+||..... ++.++..++ +..+||++||...+... .+...|
T Consensus 93 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~ 161 (256)
T 3gaf_A 93 LVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN-----------VRMASYG 161 (256)
T ss_dssp EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC-----------TTCHHHH
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC-----------CCchHHH
Confidence 99999874221 222333343 45799999997765211 123347
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..+++++.++||++.++
T Consensus 162 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~ 196 (256)
T 3gaf_A 162 SSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTD 196 (256)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCH
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCc
Confidence 89999887753 35899999999999886
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.5e-16 Score=119.73 Aligned_cols=144 Identities=17% Similarity=0.189 Sum_probs=103.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|+||.+++++|+++|++|++++|+++...... ..+... ...+.++.+|+.|++++.++++.. ++
T Consensus 38 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 112 (279)
T 1xg5_A 38 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-----AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV 112 (279)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHH-----HHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence 799999999999999999999999999764421110 011111 145788999999999998887632 79
Q ss_pred cEEEeccCCCccc------------------------hHHHHHhCC--CC--CcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE------------------------VEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~~------------------------~~~ll~~~~--~~--~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|+|||+||..... ++.+++.++ +. .+||++||...+... +..+
T Consensus 113 D~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~ 183 (279)
T 1xg5_A 113 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL---------PLSV 183 (279)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---------SCGG
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC---------CCCC
Confidence 9999999864211 455666666 43 799999998765321 1112
Q ss_pred CCcc-hhhhhHHHHHh---------hcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~---------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ ..++++++++||++.++.
T Consensus 184 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~ 226 (279)
T 1xg5_A 184 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF 226 (279)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchh
Confidence 3346 88998877542 458999999999998763
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-16 Score=119.92 Aligned_cols=141 Identities=18% Similarity=0.135 Sum_probs=100.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecC-CCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|++|.+++++|+++|++|++++|. ++...... .++.....++.++.+|+.|++++.++++.. ++|
T Consensus 27 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 101 (274)
T 1ja9_A 27 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVV-----AELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLD 101 (274)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEE
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 7999999999999999999999999994 32211100 111122356889999999999998887642 799
Q ss_pred EEEeccCCCcc--------------------chHHH----HHhCCCCCcEEEEecceec-ccCCCCCCCCCCCCCCCCcc
Q 029198 75 VVYDINGREAD--------------------EVEPI----LDALPNLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~~~~l----l~~~~~~~~~v~~Ss~~vy-g~~~~~~~~e~~~~~~~~~~ 129 (197)
+|||+||.... ++.++ ++.++...+||++||...+ ... .+...|
T Consensus 102 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~~Y 170 (274)
T 1ja9_A 102 FVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI-----------PNHALY 170 (274)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC-----------CSCHHH
T ss_pred EEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC-----------CCCchH
Confidence 99999986421 12223 3333312699999998775 321 122346
Q ss_pred -hhhhhHHHHHhh-------cCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLES-------KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~~-------~~~~~~i~r~~~i~g~ 157 (197)
.+|...|.+.+. .++++++++||+++++
T Consensus 171 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~ 206 (274)
T 1ja9_A 171 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTD 206 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence 899999887642 4899999999999886
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.5e-16 Score=116.38 Aligned_cols=142 Identities=15% Similarity=0.145 Sum_probs=103.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+.+...++.++.+|+.|+++++++++.. ++|+
T Consensus 11 TGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (247)
T 3lyl_A 11 TGASRGIGFEVAHALASKGATVVGTATSQASAEKFE-----NSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDI 85 (247)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865432111 112222457899999999999998887642 6999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||..... ++.++..+. +..+||++||...+.... ....|
T Consensus 86 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y 154 (247)
T 3lyl_A 86 LVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNP-----------GQTNY 154 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------TCHHH
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC-----------CcHHH
Confidence 99999974221 122333333 556999999976543211 23346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||++.++.
T Consensus 155 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 191 (247)
T 3lyl_A 155 CAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDM 191 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEeccc
Confidence 89998877653 368999999999999874
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.8e-16 Score=118.15 Aligned_cols=142 Identities=20% Similarity=0.249 Sum_probs=101.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCC-ccCCCCCCCchhhhhc-cCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|+||.+++++|+++|++|++++|+++. ..... ..+... ..++.++.+|+.|++++.++++.. ++
T Consensus 10 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 84 (260)
T 1x1t_A 10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVR-----AGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI 84 (260)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHH-----HHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred eCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHH-----HHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 7999999999999999999999999997654 21110 111111 346889999999999998887642 79
Q ss_pred cEEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|+|||+||..... ++.++..++ +..+||++||...+... .+..
T Consensus 85 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~ 153 (260)
T 1x1t_A 85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS-----------ANKS 153 (260)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC-----------CCCc
Confidence 9999999864211 223444444 56899999997765321 1233
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T 1x1t_A 154 AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL 192 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred hHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCch
Confidence 56 89999887653 358999999999999874
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.8e-16 Score=117.58 Aligned_cols=142 Identities=20% Similarity=0.267 Sum_probs=102.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhh-hhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|+||.+++++|+++|++|++++|+++...... ..+ .....++.++.+|+.|++++.++++.. ++|
T Consensus 27 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 101 (267)
T 1vl8_A 27 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAA-----QKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD 101 (267)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999865421110 011 111346888999999999998887642 799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEeccee-cccCCCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~ 127 (197)
+|||+||..... ++.++..++ +..+||++||..+ +. +..+..
T Consensus 102 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~ 170 (267)
T 1vl8_A 102 TVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-----------TMPNIS 170 (267)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-----------CSSSCH
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc-----------CCCCCh
Confidence 999999864211 223344554 5689999999763 21 011233
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..++++++++||++.++.
T Consensus 171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 209 (267)
T 1vl8_A 171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM 209 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTT
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccc
Confidence 46 89999988653 358999999999998874
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-16 Score=118.30 Aligned_cols=142 Identities=14% Similarity=0.191 Sum_probs=102.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEec-CCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|++|.+++++|+++|++|++++| +++..... ...+.....++.++.+|+.|++++.++++.. ++|
T Consensus 10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 84 (246)
T 2uvd_A 10 TGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEV-----VDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVD 84 (246)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999 43321110 0111122356889999999999998887642 799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
++||+||..... ++.++..++ +..+||++||...+... .+...
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 153 (246)
T 2uvd_A 85 ILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN-----------PGQAN 153 (246)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTBHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC-----------CCCch
Confidence 999999864211 334555554 56899999997654221 11234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..++++++++||++.++.
T Consensus 154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 191 (246)
T 2uvd_A 154 YVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDM 191 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGC
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcc
Confidence 6 88998877642 468999999999998874
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.66 E-value=3.8e-16 Score=115.57 Aligned_cols=139 Identities=14% Similarity=0.159 Sum_probs=99.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||+|++|.+++++|+++|++|++++|+.+..... ..+....+.+..+|+.+.+++.++++.. ++|+|||+
T Consensus 20 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 91 (249)
T 3f9i_A 20 TGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSL--------GNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN 91 (249)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--------HHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 89999999999999999999999999976542211 1122357889999999999999988754 69999999
Q ss_pred cCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhh
Q 029198 80 NGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK 132 (197)
Q Consensus 80 a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k 132 (197)
||.... + ++.++..++ +..+||++||...+... .+...| .+|
T Consensus 92 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sK 160 (249)
T 3f9i_A 92 AGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN-----------PGQANYCASK 160 (249)
T ss_dssp CC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC-----------SCSHHHHHHH
T ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC-----------CCCchhHHHH
Confidence 986421 1 222333333 55799999997765321 123346 899
Q ss_pred hhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 133 LNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 133 ~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...+.+.+ ..++++++++||++.++.
T Consensus 161 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 193 (249)
T 3f9i_A 161 AGLIGMTKSLSYEVATRGITVNAVAPGFIKSDM 193 (249)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBC---
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEecCccccCc
Confidence 98887653 368999999999999874
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.66 E-value=8.5e-17 Score=118.61 Aligned_cols=142 Identities=17% Similarity=0.205 Sum_probs=100.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEE-ecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|++|.+++++|+++|++|+++ +|+++...... ..+.....++.++.+|+.|++++.++++.. ++|
T Consensus 7 TGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 81 (244)
T 1edo_A 7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVS-----KQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 7999999999999999999999995 67644321100 111222356889999999999998887642 799
Q ss_pred EEEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+|||+||.... + ++.+++.++ +..+||++||...+... .+...
T Consensus 82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~ 150 (244)
T 1edo_A 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN-----------IGQAN 150 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTCHH
T ss_pred EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC-----------CCCcc
Confidence 99999986421 1 222333333 56799999997654211 12234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++++|||+++++.
T Consensus 151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (244)
T 1edo_A 151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM 188 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred chhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccch
Confidence 6 88998877653 358999999999999873
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-16 Score=118.74 Aligned_cols=141 Identities=19% Similarity=0.252 Sum_probs=101.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+.....++.++.+|+.|++++.++++.. ++|+
T Consensus 8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (256)
T 1geg_A 8 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA-----SEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 82 (256)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999865422110 111112346889999999999998887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+||..... ++.++..++ + ..+||++||...+... .....
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 151 (256)
T 1geg_A 83 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN-----------PELAV 151 (256)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------TTBHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC-----------CCchh
Confidence 99999864211 233444444 4 5799999997654211 11234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..++++++++||++.++
T Consensus 152 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 188 (256)
T 1geg_A 152 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP 188 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccc
Confidence 6 89998887653 36899999999999886
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.7e-16 Score=118.28 Aligned_cols=150 Identities=17% Similarity=0.145 Sum_probs=107.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||+|+||.+++++|+++|++|++++|++++...... +...++.++.+|+.|+++++++++.. ++|+|||+
T Consensus 22 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n 93 (291)
T 3rd5_A 22 TGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR--------TMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN 93 (291)
T ss_dssp ECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT--------TSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------HhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 7999999999999999999999999998765332111 11357899999999999999998865 78999999
Q ss_pred cCCCcc------------------chHHHHHhCC--CCCcEEEEecceecccC-CCCCCC-CCCCCCCCCcc-hhhhhHH
Q 029198 80 NGREAD------------------EVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHC-ETDTVDPKSRH-KGKLNTE 136 (197)
Q Consensus 80 a~~~~~------------------~~~~ll~~~~--~~~~~v~~Ss~~vyg~~-~~~~~~-e~~~~~~~~~~-~~k~~~e 136 (197)
||.... ++..+++++. ..++||++||...+... ...... +..+..+...| .+|...+
T Consensus 94 Ag~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~ 173 (291)
T 3rd5_A 94 AGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANL 173 (291)
T ss_dssp CCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHH
T ss_pred CcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHH
Confidence 996321 1344555554 34699999998766432 111111 11222233447 8999988
Q ss_pred HHHh-------hcC--CcEEEEccceeeCCC
Q 029198 137 SVLE-------SKG--VNWTSLRPVYIYGPL 158 (197)
Q Consensus 137 ~~~~-------~~~--~~~~i~r~~~i~g~~ 158 (197)
.+.+ ..+ ++++.++||++..+.
T Consensus 174 ~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~ 204 (291)
T 3rd5_A 174 LFTSELQRRLTAAGSPLRALAAHPGYSHTNL 204 (291)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECCSGGGSCC
T ss_pred HHHHHHHHHHhhCCCCEEEEEeeCCCCcccc
Confidence 7653 235 999999999998764
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.4e-16 Score=117.62 Aligned_cols=140 Identities=16% Similarity=0.224 Sum_probs=94.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEe-cCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|++|.+++++|+++|++|++++ |+++...... ..+.....++.++.+|+.|+++++++++.. ++|
T Consensus 11 tGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 85 (247)
T 2hq1_A 11 TGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATA-----EEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRID 85 (247)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHH-----HHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 79999999999999999999999994 5443311100 111122356899999999999998887643 799
Q ss_pred EEEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecce-ecccCCCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~ 127 (197)
+|||+||.... + ++.+++.++ +..+||++||.. .++.. +..
T Consensus 86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~ 153 (247)
T 2hq1_A 86 ILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA------------GQA 153 (247)
T ss_dssp EEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------CH
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC------------CCc
Confidence 99999986421 1 223344443 567999999964 44321 123
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.| .+|...+.+.+ ..++++++++||++.++
T Consensus 154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 191 (247)
T 2hq1_A 154 NYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTD 191 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEecc
Confidence 46 89999887753 34899999999999876
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.6e-16 Score=120.70 Aligned_cols=142 Identities=17% Similarity=0.161 Sum_probs=101.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc-cCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+.+. ..++.++.+|+.|.+++.++++.. ++|
T Consensus 32 TGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 106 (302)
T 1w6u_A 32 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATA-----EQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN 106 (302)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999865422110 111111 356899999999999998887643 689
Q ss_pred EEEeccCCCcc--------------------ch----HHHHHhC--C-CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREAD--------------------EV----EPILDAL--P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~~----~~ll~~~--~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+|||+||.... ++ +.++..+ + +..+||++||...+... .+..
T Consensus 107 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~ 175 (302)
T 1w6u_A 107 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-----------GFVV 175 (302)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC-----------TTCH
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC-----------CCcc
Confidence 99999985321 11 2223333 2 45799999997665321 1234
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..+++++++|||+++++.
T Consensus 176 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~ 214 (302)
T 1w6u_A 176 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG 214 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcc
Confidence 56 89999988753 268999999999999873
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-15 Score=112.92 Aligned_cols=146 Identities=16% Similarity=0.091 Sum_probs=100.7
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-------
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~------- 71 (197)
|||+|++|.+++++|+++| ++|++++|+++..... .. + ...++.++.+|+.|++++.++++..
T Consensus 9 tGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l-~~-----~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 80 (250)
T 1yo6_A 9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-KS-----I--KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH-HT-----C--CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred ecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHH-Hh-----c--cCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 7999999999999999999 9999999986553211 00 0 1357899999999999998887643
Q ss_pred CccEEEeccCCCc-c--------------------chHHHHHhCC-----C------------CCcEEEEecceecccCC
Q 029198 72 GFDVVYDINGREA-D--------------------EVEPILDALP-----N------------LEQFIYCSSAGVYLKSD 113 (197)
Q Consensus 72 ~~d~vi~~a~~~~-~--------------------~~~~ll~~~~-----~------------~~~~v~~Ss~~vyg~~~ 113 (197)
++|+|||+||... . ++.++++++. . ..+||++||...+....
T Consensus 81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 160 (250)
T 1yo6_A 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN 160 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc
Confidence 7999999998653 1 1122333322 2 57899999976653321
Q ss_pred CCCCCCCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 114 LLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 114 ~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
. +..+..+...| .+|...+.+.+ ..++++++++||++.++.
T Consensus 161 ~----~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 209 (250)
T 1yo6_A 161 T----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209 (250)
T ss_dssp C----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----
T ss_pred c----cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCC
Confidence 1 11111234457 89999888753 248999999999998874
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.4e-16 Score=117.71 Aligned_cols=138 Identities=17% Similarity=0.170 Sum_probs=103.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++..... ..+...++.++.+|+.|+++++++++.. ++|+
T Consensus 33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 104 (277)
T 4dqx_A 33 TGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRV--------ANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV 104 (277)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986542211 1112357899999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..++ +..+||++||...+... .+...|
T Consensus 105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 173 (277)
T 4dqx_A 105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI-----------ADRTAY 173 (277)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC-----------TTBHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC-----------CCChhH
Confidence 99999964211 233455555 45699999997765321 123457
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..+++++.++||++.++
T Consensus 174 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 209 (277)
T 4dqx_A 174 VASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSP 209 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence 89999887653 35899999999999876
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.4e-16 Score=120.60 Aligned_cols=143 Identities=20% Similarity=0.202 Sum_probs=102.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.+....... ........++.++.+|+.|+++++++++.. ++|+
T Consensus 53 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 128 (291)
T 3ijr_A 53 TGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETK----QYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI 128 (291)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998653211100 111222357899999999999988887643 7999
Q ss_pred EEeccCCCcc---------------------chHHH----HHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREAD---------------------EVEPI----LDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~---------------------~~~~l----l~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
+||+||.... ++..+ +..++...+||++||...+.... ....|
T Consensus 129 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y~ 197 (291)
T 3ijr_A 129 LVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE-----------TLIDYS 197 (291)
T ss_dssp EEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT-----------TCHHHH
T ss_pred EEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC-----------CChhHH
Confidence 9999986421 12223 33333445899999987664221 12346
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||+++++.
T Consensus 198 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 233 (291)
T 3ijr_A 198 ATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL 233 (291)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTH
T ss_pred HHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCc
Confidence 89999887653 358999999999999873
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.8e-16 Score=118.59 Aligned_cols=141 Identities=18% Similarity=0.189 Sum_probs=102.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh--ccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+.+ ...++.++.+|+.|++++.++++.. ++
T Consensus 13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (267)
T 2gdz_A 13 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCK-----AALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL 87 (267)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred ECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999865421100 00111 0246889999999999998887642 68
Q ss_pred cEEEeccCCCcc----------------chHHHHHhCC--C---CCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hh
Q 029198 74 DVVYDINGREAD----------------EVEPILDALP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG 131 (197)
Q Consensus 74 d~vi~~a~~~~~----------------~~~~ll~~~~--~---~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~ 131 (197)
|+|||+||.... .++.+++.++ + ..+||++||...+.... +...| .+
T Consensus 88 d~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y~~s 156 (267)
T 2gdz_A 88 DILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA-----------QQPVYCAS 156 (267)
T ss_dssp CEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-----------TCHHHHHH
T ss_pred CEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC-----------CCchHHHH
Confidence 999999986421 1345666665 2 57899999987654211 12346 88
Q ss_pred hhhHHHHHh---------hcCCcEEEEccceeeCC
Q 029198 132 KLNTESVLE---------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 132 k~~~e~~~~---------~~~~~~~i~r~~~i~g~ 157 (197)
|...+.+.+ ..++++++++||++.++
T Consensus 157 K~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~ 191 (267)
T 2gdz_A 157 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTA 191 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSH
T ss_pred HHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcch
Confidence 988876643 36899999999999876
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-16 Score=118.87 Aligned_cols=142 Identities=15% Similarity=0.218 Sum_probs=103.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCHHHHHhhhhc----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~----~~~d 74 (197)
|||+|++|.+++++|+++|++|++++|+++...... .++... ..++.++.+|+.|++++.++++. .++|
T Consensus 13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gid 87 (260)
T 2z1n_A 13 TAGSSGLGFASALELARNGARLLLFSRNREKLEAAA-----SRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGAD 87 (260)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCS
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 799999999999999999999999999765422110 011111 12688999999999998888762 2499
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+|||+||..... ++.+++.++ +..+||++||...+... .+...
T Consensus 88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 156 (260)
T 2z1n_A 88 ILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW-----------QDLAL 156 (260)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC-----------CCCch
Confidence 999999864211 244556555 66899999998775321 12334
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..++++++++||+++++.
T Consensus 157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 194 (260)
T 2z1n_A 157 SNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDR 194 (260)
T ss_dssp HHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCC
T ss_pred hHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccch
Confidence 6 88998887653 358999999999999885
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.66 E-value=8.2e-16 Score=115.14 Aligned_cols=131 Identities=18% Similarity=0.199 Sum_probs=99.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++... .....+.+|+.|++++.++++.. ++|+
T Consensus 20 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 84 (269)
T 3vtz_A 20 TGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV---------------NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI 84 (269)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT---------------TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc---------------CceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 899999999999999999999999999876521 24678899999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..++ +..+||++||...+.... ....|
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y 153 (269)
T 3vtz_A 85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATK-----------NAAAY 153 (269)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT-----------TCHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC-----------CChhH
Confidence 99999874211 223344444 567999999987764211 23356
Q ss_pred -hhhhhHHHHHhh------cCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLES------KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~~------~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+. .+++++.++||++.++
T Consensus 154 ~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~ 188 (269)
T 3vtz_A 154 VTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTP 188 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCc
Confidence 899999887532 2799999999999886
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=3.2e-16 Score=115.92 Aligned_cols=141 Identities=20% Similarity=0.199 Sum_probs=101.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... .++.....++.++.+|+.|++++.++++.. ++|+
T Consensus 13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 87 (247)
T 2jah_A 13 TGASSGIGEATARALAAEGAAVAIAARRVEKLRALG-----DELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDI 87 (247)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865422110 111122346889999999999998887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..++ + .+||++||...+... .+...|
T Consensus 88 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------~~~~~Y 155 (247)
T 2jah_A 88 LVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV-----------RNAAVY 155 (247)
T ss_dssp EEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC-----------TTCHHH
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC-----------CCCcHH
Confidence 99999864211 122333333 4 799999997654211 122346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..|+++++++||++.++.
T Consensus 156 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 192 (247)
T 2jah_A 156 QATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL 192 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcc
Confidence 88988877643 468999999999998874
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.5e-16 Score=117.60 Aligned_cols=138 Identities=17% Similarity=0.129 Sum_probs=102.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++..... ..+...++.++.+|+.|++++.++++.. ++|+
T Consensus 35 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 35 TGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA--------ATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp TTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHH--------HHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986543211 1122457899999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..++ +..+||++||...+.. ..+...|
T Consensus 107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y 175 (277)
T 3gvc_A 107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA-----------VGGTGAY 175 (277)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------CTTBHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------CCCchhH
Confidence 99999974211 223344443 4568999999765421 1123357
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..+++++.++||+++++
T Consensus 176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~ 211 (277)
T 3gvc_A 176 GMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTP 211 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCc
Confidence 89999887653 36899999999999986
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.8e-16 Score=118.58 Aligned_cols=138 Identities=15% Similarity=0.225 Sum_probs=100.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|++++.... ..+...++.++.+|+.|+++++++++.. ++|+
T Consensus 33 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 104 (266)
T 3grp_A 33 TGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEI--------AADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI 104 (266)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 89999999999999999999999999976543211 1122457899999999999998887642 7999
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||.... + ++.++..++ +..+||++||...+... .+...|
T Consensus 105 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----------~~~~~Y 173 (266)
T 3grp_A 105 LVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN-----------PGQTNY 173 (266)
T ss_dssp EEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------------CHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC-----------CCchhH
Confidence 9999997421 1 344555554 56799999997654211 122346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..+++++.++||++.++
T Consensus 174 ~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~ 209 (266)
T 3grp_A 174 CAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSA 209 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSH
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCc
Confidence 89998887653 35899999999999886
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-16 Score=119.18 Aligned_cols=149 Identities=18% Similarity=0.207 Sum_probs=103.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhh-hccCceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
|||+|++|.+++++|+++|++|++++|+.++..... .++. ....++.++.+|+.|+++++++++. .++|
T Consensus 20 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 94 (265)
T 1h5q_A 20 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVT-----EKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPIS 94 (265)
T ss_dssp ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHH-----HHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEE
T ss_pred ECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHH-----HHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 799999999999999999999999999765422110 0111 1135789999999999999887763 2599
Q ss_pred EEEeccCCCcc--------------------chHHHHHh----CC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~~~~ll~~----~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+|||+||.... ++.+++++ +. + ..+||++||...+..... ...+..+..
T Consensus 95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~~~~ 170 (265)
T 1h5q_A 95 GLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLNGSLTQV 170 (265)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETTEECSCH
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----ccccccccc
Confidence 99999986421 12223333 22 2 478999999776432110 011222344
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..+++++++|||+++++.
T Consensus 171 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 209 (265)
T 1h5q_A 171 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ 209 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccc
Confidence 57 89999988763 358999999999999884
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=1e-16 Score=119.48 Aligned_cols=146 Identities=19% Similarity=0.158 Sum_probs=99.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCC---CCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----C
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ---LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~ 72 (197)
|||+|++|.+++++|+++|++|++++|+++..... +... .........++.++.+|+.|++++.++++.. +
T Consensus 13 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 91 (264)
T 2pd6_A 13 TGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGP-GSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSR 91 (264)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC-------------CCEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CccccccCcceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 79999999999999999999999999986542211 1000 0000000146889999999999998887632 3
Q ss_pred c-cEEEeccCCCcc--------------------chHHHHHh----CC--C-CCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 73 F-DVVYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 73 ~-d~vi~~a~~~~~--------------------~~~~ll~~----~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
+ |+|||+||.... ++.+++++ +. + ..+||++||...+... .
T Consensus 92 i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 160 (264)
T 2pd6_A 92 PPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN-----------V 160 (264)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC-----------T
T ss_pred CCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC-----------C
Confidence 4 999999986421 12233333 32 3 5689999997543211 1
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+...| .+|...+.+.+ ..+++++++|||+++++.
T Consensus 161 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 202 (264)
T 2pd6_A 161 GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPM 202 (264)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC
T ss_pred CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccc
Confidence 23456 89998887653 368999999999999985
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-16 Score=120.28 Aligned_cols=142 Identities=18% Similarity=0.240 Sum_probs=101.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++++..... ..+.....++.++.+|+.|+++++++++. .++|+
T Consensus 50 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~ 124 (285)
T 2c07_A 50 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-----DEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI 124 (285)
T ss_dssp ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred ECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----HHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999988754421110 11111234688999999999999888753 27999
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||.... + ++.++..++ +..+||++||...+.... +...|
T Consensus 125 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~Y 193 (285)
T 2c07_A 125 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV-----------GQANY 193 (285)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------TCHHH
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC-----------CCchH
Confidence 9999986421 1 233444444 568999999976543211 12346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++++++++||++.++.
T Consensus 194 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 230 (285)
T 2c07_A 194 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM 230 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCc
Confidence 88998887653 358999999999999874
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=9.9e-16 Score=113.37 Aligned_cols=137 Identities=16% Similarity=0.200 Sum_probs=101.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++..... ..+...++.++.+|+.|++++.++++.. ++|+
T Consensus 6 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 77 (248)
T 3asu_A 6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQEL--------KDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI 77 (248)
T ss_dssp TTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 79999999999999999999999999976542111 0111246889999999999999888643 7999
Q ss_pred EEeccCCCc--cc-----------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREA--DE-----------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~--~~-----------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||... .. ++.++..++ +..+||++||...+... .+...
T Consensus 78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~ 146 (248)
T 3asu_A 78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY-----------AGGNV 146 (248)
T ss_dssp EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----------TTCHH
T ss_pred EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC-----------CCCch
Confidence 999998641 00 233444443 56899999997764211 12335
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYG 156 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g 156 (197)
| .+|...+.+.+ ..+++++.++||++.|
T Consensus 147 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~g 182 (248)
T 3asu_A 147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG 182 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccccc
Confidence 6 89999988753 3589999999999994
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.8e-16 Score=117.01 Aligned_cols=142 Identities=15% Similarity=0.125 Sum_probs=102.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEE-ecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|+||.+++++|+++|++|+++ .|+++...... ..+.+...++.++.+|+.|+++++++++.. ++|
T Consensus 10 TGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (258)
T 3oid_A 10 TGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETA-----EEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLD 84 (258)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred ecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 8999999999999999999999997 66654321110 112222457899999999999999888643 789
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
++||+||..... ++.++..++ +..+||++||...+... .+...
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~ 153 (258)
T 3oid_A 85 VFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYL-----------ENYTT 153 (258)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBC-----------TTCHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCC-----------CCcHH
Confidence 999999863211 222334444 45799999997765221 12345
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 154 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 191 (258)
T 3oid_A 154 VGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDA 191 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGG
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChh
Confidence 7 89999988753 358999999999998874
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=3.2e-16 Score=117.84 Aligned_cols=142 Identities=15% Similarity=0.164 Sum_probs=100.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhh---hhccCceEEEeecCCCHHHHHhhhhcc-----C
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF---AEFSSKILHLKGDRKDYDFVKSSLSAK-----G 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~ 72 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+ .....++.++.+|+.|++++.++++.. +
T Consensus 12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (278)
T 1spx_A 12 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR-----QQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK 86 (278)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCC
Confidence 799999999999999999999999999865422100 001 011246889999999999998887643 7
Q ss_pred ccEEEeccCCCcc----------c------------------hHHHHHhCC-CCCcEEEEeccee-cccCCCCCCCCCCC
Q 029198 73 FDVVYDINGREAD----------E------------------VEPILDALP-NLEQFIYCSSAGV-YLKSDLLPHCETDT 122 (197)
Q Consensus 73 ~d~vi~~a~~~~~----------~------------------~~~ll~~~~-~~~~~v~~Ss~~v-yg~~~~~~~~e~~~ 122 (197)
+|+|||+||.... . ++.++..++ ...+||++||... +...
T Consensus 87 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 156 (278)
T 1spx_A 87 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHAT---------- 156 (278)
T ss_dssp CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCC----------
T ss_pred CCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCC----------
Confidence 9999999986321 1 122334443 2379999999765 4211
Q ss_pred CCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+...| .+|...+.+.+ ..++++++++||+++++.
T Consensus 157 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 199 (278)
T 1spx_A 157 -PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF 199 (278)
T ss_dssp -TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCcc
Confidence 122346 89999888753 368999999999999875
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.1e-16 Score=117.46 Aligned_cols=143 Identities=17% Similarity=0.195 Sum_probs=102.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.......+ ...+.....++.++.+|+.|+++++++++.. ++|+
T Consensus 34 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~ 109 (269)
T 4dmm_A 34 TGASRGIGRAIALELAAAGAKVAVNYASSAGAADEV----VAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDV 109 (269)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999543321111 0112222457899999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..++ +..+||++||...+.... ....|
T Consensus 110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y 178 (269)
T 4dmm_A 110 LVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNP-----------GQANY 178 (269)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCT-----------TCHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC-----------CchhH
Confidence 99999875211 222333343 567999999976543211 12346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..|++++.++||++.++.
T Consensus 179 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 215 (269)
T 4dmm_A 179 SAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDM 215 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSC
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcc
Confidence 89998887653 368999999999999874
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=6.4e-16 Score=114.87 Aligned_cols=135 Identities=13% Similarity=0.084 Sum_probs=98.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++. .... .+. .. .++.+|+.|++++.++++.. ++|+
T Consensus 12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~--------~~~-~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 80 (256)
T 2d1y_A 12 TGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVA--------EAI-GG-AFFQVDLEDERERVRFVEEAAYALGRVDV 80 (256)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHH--------HHH-TC-EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHH--------HHh-hC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998654 2110 111 13 78899999999988887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||..... ++.++..++ +..+||++||...+... .+...|
T Consensus 81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 149 (256)
T 2d1y_A 81 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-----------QENAAY 149 (256)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----------TTBHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-----------CCChhH
Confidence 99999864211 122334443 56799999997654211 123346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..++++++++||++.++
T Consensus 150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 185 (256)
T 2d1y_A 150 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE 185 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCc
Confidence 89999887653 35899999999999875
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.3e-16 Score=115.58 Aligned_cols=142 Identities=14% Similarity=0.147 Sum_probs=98.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc----CccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~----~~d~v 76 (197)
|||+|+||.+++++|+++|++|++++|+++...... ..+.....++.++.+|+.|++++.++++.. ++|++
T Consensus 13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~l 87 (252)
T 3h7a_A 13 IGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLV-----AEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVT 87 (252)
T ss_dssp ECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEE
Confidence 799999999999999999999999999876532211 122222457899999999999998888643 79999
Q ss_pred EeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 77 YDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 77 i~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
||+||..... ++.++..++ +..+||++||...+... .....|
T Consensus 88 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~ 156 (252)
T 3h7a_A 88 IFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG-----------SGFAAFA 156 (252)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC-----------TTCHHHH
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC-----------CCCccHH
Confidence 9999974211 233444444 55799999997654211 123346
Q ss_pred hhhhhHHHHHh-------hcCCcE-EEEccceeeCCC
Q 029198 130 KGKLNTESVLE-------SKGVNW-TSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~-~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++++ +++.||++..+.
T Consensus 157 asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~ 193 (252)
T 3h7a_A 157 SAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAW 193 (252)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChh
Confidence 89999887653 368999 899999998764
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.65 E-value=8.8e-16 Score=113.56 Aligned_cols=130 Identities=21% Similarity=0.300 Sum_probs=95.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++... .+..+.+|+.|++++.++++.. ++|+
T Consensus 21 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------------~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 84 (247)
T 1uzm_A 21 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK----------------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV 84 (247)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------------TSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----------------HhcCeeccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865421 1223789999999998887642 6899
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||..... ++.++..++ +..+||++||...+... .+...|
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 153 (247)
T 1uzm_A 85 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI-----------GNQANY 153 (247)
T ss_dssp EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC-----------CCChhH
Confidence 99999864211 223334443 56799999997653211 112346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..++++++++||++.++
T Consensus 154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 189 (247)
T 1uzm_A 154 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTD 189 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCccc
Confidence 88998887653 36899999999999876
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.65 E-value=6e-16 Score=116.76 Aligned_cols=158 Identities=18% Similarity=0.142 Sum_probs=105.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCc-------hhhhhccCceEEEeecCCCHHHHHhhhhcc--
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-- 71 (197)
|||+|+||.+++++|+++|++|++++|+............. ..+.....++.++.+|+.|++++.++++..
T Consensus 16 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 95 (287)
T 3pxx_A 16 TGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVA 95 (287)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred eCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 79999999999999999999999999985432211111110 111223457899999999999998887643
Q ss_pred ---CccEEEeccCCCcc------------------chHHHHHh----CCCCCcEEEEecceecccCCCCCCCCCCCCCCC
Q 029198 72 ---GFDVVYDINGREAD------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 72 ---~~d~vi~~a~~~~~------------------~~~~ll~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 126 (197)
++|+|||+||.... ++.+++++ +++..+||++||...+......+..+..+..+.
T Consensus 96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~ 175 (287)
T 3pxx_A 96 EFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGG 175 (287)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----CHHHH
T ss_pred HcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccccCCCcc
Confidence 79999999997421 12223333 334468999999776543222222222221222
Q ss_pred Ccc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
..| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 176 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 215 (287)
T 3pxx_A 176 AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDM 215 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTT
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccc
Confidence 346 89999887653 358999999999999885
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.65 E-value=5e-16 Score=115.56 Aligned_cols=142 Identities=15% Similarity=0.163 Sum_probs=102.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++...... ..+.....++.++.+|+.|++++.++++.. ++|+
T Consensus 12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 86 (257)
T 3imf_A 12 TGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAK-----LEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDI 86 (257)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 899999999999999999999999999866532111 111122357899999999999998887643 7999
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhC-C--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------E----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~-~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||.... + ++.++..+ + +..+||++||...+... .....
T Consensus 87 lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 155 (257)
T 3imf_A 87 LINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG-----------PGVIH 155 (257)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC-----------TTCHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC-----------CCcHH
Confidence 9999986321 1 22333443 2 35799999997765221 12234
Q ss_pred c-hhhhhHHHHHh--------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE--------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~--------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 156 Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~ 194 (257)
T 3imf_A 156 SAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTG 194 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCC
T ss_pred HHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCc
Confidence 6 88998877642 458999999999999874
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-15 Score=113.54 Aligned_cols=139 Identities=11% Similarity=0.132 Sum_probs=98.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++........ ...++.++.+|+.|++++.++++.. ++|+
T Consensus 13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 84 (257)
T 3tpc_A 13 TGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE--------LGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84 (257)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH--------hCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987764332211 1356899999999999998887643 7999
Q ss_pred EEeccCCCcc------------------------c----hHHHHHhCC--------CCCcEEEEecceecccCCCCCCCC
Q 029198 76 VYDINGREAD------------------------E----VEPILDALP--------NLEQFIYCSSAGVYLKSDLLPHCE 119 (197)
Q Consensus 76 vi~~a~~~~~------------------------~----~~~ll~~~~--------~~~~~v~~Ss~~vyg~~~~~~~~e 119 (197)
+||+||.... + ++.++..++ +..+||++||...+....
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~------ 158 (257)
T 3tpc_A 85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI------ 158 (257)
T ss_dssp EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT------
T ss_pred EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC------
Confidence 9999986421 0 122333333 135799999977653211
Q ss_pred CCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 120 TDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 120 ~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+...| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 159 -----~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 200 (257)
T 3tpc_A 159 -----GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPM 200 (257)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChh
Confidence 23346 89998887642 368999999999999874
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.8e-16 Score=115.93 Aligned_cols=142 Identities=17% Similarity=0.133 Sum_probs=100.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.+...... .++.....++.++.+|+.|++++.++++.. ++|+
T Consensus 35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 109 (262)
T 3rkr_A 35 TGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVE-----REIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDV 109 (262)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999865532111 122223457899999999999998887642 6999
Q ss_pred EEeccCCC-cc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGRE-AD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~-~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+||.. .. + ++.++..++ +..+||++||...+.. ..+...
T Consensus 110 lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~ 178 (262)
T 3rkr_A 110 LVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNP-----------VADGAA 178 (262)
T ss_dssp EEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCC-----------CTTCHH
T ss_pred EEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC-----------CCCCch
Confidence 99999972 11 1 223344443 5679999999776421 112334
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++.++||++..+.
T Consensus 179 Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~ 216 (262)
T 3rkr_A 179 YTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEF 216 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCc
Confidence 6 89998887653 368999999999998763
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=5.8e-17 Score=121.55 Aligned_cols=142 Identities=15% Similarity=0.150 Sum_probs=102.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... .++.+...++.++.+|+.|++++.++++.. ++|+
T Consensus 37 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~ 111 (272)
T 1yb1_A 37 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-----AKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI 111 (272)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHH-----HHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence 799999999999999999999999999765422110 111222357899999999999998887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||..... ++.+++.++ +..+||++||...+... .+...|
T Consensus 112 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y 180 (272)
T 1yb1_A 112 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV-----------PFLLAY 180 (272)
T ss_dssp EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH-----------HHHHHH
T ss_pred EEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC-----------CCchhH
Confidence 99999864211 233444444 56799999997765321 112346
Q ss_pred -hhhhhHHHHHh----------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE----------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~----------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++++++++||++.++.
T Consensus 181 ~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~ 220 (272)
T 1yb1_A 181 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF 220 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCc
Confidence 88998887653 237999999999998764
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-15 Score=113.86 Aligned_cols=144 Identities=17% Similarity=0.191 Sum_probs=102.9
Q ss_pred CCcccchHHHHHHHHHHCC---CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc------
Q 029198 1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------ 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~------ 71 (197)
|||+|+||.+++++|+++| ++|++++|+.+.... + .++.....++.++.+|+.|.+++.++++..
T Consensus 27 TGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~-~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 100 (267)
T 1sny_A 27 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-L-----EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 100 (267)
T ss_dssp SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-H-----HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred ECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH-H-----HHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCC
Confidence 7999999999999999999 999999998765321 1 112222357899999999999888887643
Q ss_pred -CccEEEeccCCCc-c--------------------chHHHHHhC----C-C------------CCcEEEEecceecccC
Q 029198 72 -GFDVVYDINGREA-D--------------------EVEPILDAL----P-N------------LEQFIYCSSAGVYLKS 112 (197)
Q Consensus 72 -~~d~vi~~a~~~~-~--------------------~~~~ll~~~----~-~------------~~~~v~~Ss~~vyg~~ 112 (197)
++|+|||+||... . ++..+++++ + . ..+||++||...+...
T Consensus 101 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 180 (267)
T 1sny_A 101 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG 180 (267)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred CCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccC
Confidence 6999999998643 1 112222222 2 1 4689999998765432
Q ss_pred CCCCCCCCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 113 DLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 113 ~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
. +..+...| .+|...+.+.+ ..++++++++||++..+.
T Consensus 181 ~--------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 226 (267)
T 1sny_A 181 N--------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 226 (267)
T ss_dssp C--------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred C--------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCC
Confidence 1 01123347 89999887653 258999999999997764
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.1e-16 Score=116.20 Aligned_cols=137 Identities=16% Similarity=0.101 Sum_probs=99.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|++++... .+.+ .++.++.+|+.|++++.++++.. ++|+
T Consensus 33 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--------~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 102 (260)
T 3gem_A 33 TGASQRVGLHCALRLLEHGHRVIISYRTEHASVT--------ELRQ--AGAVALYGDFSCETGIMAFIDLLKTQTSSLRA 102 (260)
T ss_dssp SSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHH--------HHHH--HTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--------HHHh--cCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 7999999999999999999999999998765321 1111 24789999999999998887642 7999
Q ss_pred EEeccCCCccc-----------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREADE-----------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~~-----------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
|||+||..... ++.++..++ +..+||++||...+... .+...|
T Consensus 103 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~ 171 (260)
T 3gem_A 103 VVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS-----------SKHIAYC 171 (260)
T ss_dssp EEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC-----------SSCHHHH
T ss_pred EEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC-----------CCcHhHH
Confidence 99999964211 222333333 45799999997765321 123356
Q ss_pred hhhhhHHHHHhh------cCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLES------KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~~------~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+. .+++++.++||++.++.
T Consensus 172 asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~ 206 (260)
T 3gem_A 172 ATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQP 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCC
Confidence 899998876532 25999999999998763
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.1e-16 Score=113.61 Aligned_cols=135 Identities=19% Similarity=0.170 Sum_probs=101.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-cCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-~~~d~vi~~ 79 (197)
|||+|++|.+++++|+++ +|++++|++++... ..+.... .++.+|+.|++++.++++. -++|+|||+
T Consensus 6 tGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~---------~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 73 (207)
T 2yut_A 6 TGATGGLGGAFARALKGH--DLLLSGRRAGALAE---------LAREVGA-RALPADLADELEAKALLEEAGPLDLLVHA 73 (207)
T ss_dssp ETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHH---------HHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred EcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHH---------HHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence 799999999999999999 99999997644211 1110112 8889999999999988863 279999999
Q ss_pred cCCCcc--------------------chHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHH
Q 029198 80 NGREAD--------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE 136 (197)
Q Consensus 80 a~~~~~--------------------~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e 136 (197)
||.... ++.+++++++ +..+||++||...|... .+...| .+|...+
T Consensus 74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~ 142 (207)
T 2yut_A 74 VGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQV-----------PGFAAYAAAKGALE 142 (207)
T ss_dssp CCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSS-----------TTBHHHHHHHHHHH
T ss_pred CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----------CCcchHHHHHHHHH
Confidence 986421 1345677776 56899999998876421 223457 8999988
Q ss_pred HHHhh-------cCCcEEEEccceeeCCC
Q 029198 137 SVLES-------KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 137 ~~~~~-------~~~~~~i~r~~~i~g~~ 158 (197)
.+.+. .+++++++|||+++++.
T Consensus 143 ~~~~~~~~~~~~~gi~v~~v~pg~v~t~~ 171 (207)
T 2yut_A 143 AYLEAARKELLREGVHLVLVRLPAVATGL 171 (207)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCCCBCSGG
T ss_pred HHHHHHHHHHhhhCCEEEEEecCcccCCC
Confidence 87642 58999999999999873
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=8.4e-16 Score=115.87 Aligned_cols=143 Identities=16% Similarity=0.084 Sum_probs=101.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.+...... ...+.....++.++.+|+.|.+++.++++.. ++|+
T Consensus 35 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 110 (283)
T 1g0o_A 35 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV----VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI 110 (283)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999864311100 0111222357889999999999988877532 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
|||+||..... ++.++..+++..+||++||...+... +.+...| .
T Consensus 111 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~Y~a 180 (283)
T 1g0o_A 111 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA----------VPKHAVYSG 180 (283)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS----------CSSCHHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC----------CCCCcchHH
Confidence 99999864211 12334444445799999997653211 0113347 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
+|...+.+.+ ..++++++++||++.++
T Consensus 181 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 214 (283)
T 1g0o_A 181 SKGAIETFARCMAIDMADKKITVNVVAPGGIKTD 214 (283)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEecCcccch
Confidence 9999887753 36899999999999886
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=3.2e-16 Score=116.43 Aligned_cols=143 Identities=20% Similarity=0.237 Sum_probs=102.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|+++++......... ...+.....++.++.+|+.|.+++.++++.. ++|+
T Consensus 19 TGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 94 (256)
T 3ezl_A 19 TGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKW----LEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDV 94 (256)
T ss_dssp TTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHH----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 899999999999999999999999985433311100 0112223457899999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||..... ++.++..++ +..+||++||...+... .+...|
T Consensus 95 lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 163 (256)
T 3ezl_A 95 LVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ-----------FGQTNY 163 (256)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC-----------SCCHHH
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC-----------CCCccc
Confidence 99999864211 233445454 56799999997654221 123457
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||++.++.
T Consensus 164 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 200 (256)
T 3ezl_A 164 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 200 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcc
Confidence 89998887653 368999999999998863
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.3e-16 Score=115.92 Aligned_cols=141 Identities=17% Similarity=0.194 Sum_probs=101.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCC--ccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|+||.+++++|+++|++|++++|+++. ..... ..+.....++.++.+|+.|++++.++++.. ++
T Consensus 8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 82 (258)
T 3a28_C 8 TGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETI-----KLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGF 82 (258)
T ss_dssp ETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 7999999999999999999999999997654 21100 111112356889999999999988877632 79
Q ss_pred cEEEeccCCCccc------------------------hHHHHHhCC--CC-CcEEEEecceecccCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE------------------------VEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 74 d~vi~~a~~~~~~------------------------~~~ll~~~~--~~-~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 126 (197)
|+|||+||..... ++.++..++ +. .+||++||...+... .+.
T Consensus 83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~ 151 (258)
T 3a28_C 83 DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF-----------PIL 151 (258)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC-----------TTC
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC-----------CCc
Confidence 9999999864211 223444444 45 799999997664311 123
Q ss_pred Ccc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
..| .+|...+.+.+ ..++++++++||++.++
T Consensus 152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 190 (258)
T 3a28_C 152 SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTG 190 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCCh
Confidence 346 89999887653 35899999999999776
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.64 E-value=9.5e-16 Score=113.47 Aligned_cols=139 Identities=17% Similarity=0.204 Sum_probs=102.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++..... ..+.......+.+|+.|+++++++++.. ++|+
T Consensus 15 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 86 (248)
T 3op4_A 15 TGASRGIGKAIAELLAERGAKVIGTATSESGAQAI--------SDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI 86 (248)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH--------HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986542211 1112345788999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..++ +..+||++||...+... .+...|
T Consensus 87 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 155 (248)
T 3op4_A 87 LVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN-----------AGQANY 155 (248)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTCHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----------CCChHH
Confidence 99999974211 223344443 56799999997654221 123346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||++..+.
T Consensus 156 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 192 (248)
T 3op4_A 156 AAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 192 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCch
Confidence 89998887653 368999999999998874
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-15 Score=114.80 Aligned_cols=144 Identities=19% Similarity=0.192 Sum_probs=103.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++...... .++.+...++.++.+|+.|+++++++++.. ++|+
T Consensus 38 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~ 112 (276)
T 3r1i_A 38 TGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVA-----DEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDI 112 (276)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865532111 122233457899999999999999888743 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||..... ++.++..++ + ..+||++||...+... .+.+...
T Consensus 113 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~---------~~~~~~~ 183 (276)
T 3r1i_A 113 AVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN---------IPQQVSH 183 (276)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------CSSCCHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC---------CCCCcch
Confidence 99999974321 222333333 3 3689999997654211 0112344
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++.++||++..+.
T Consensus 184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 221 (276)
T 3r1i_A 184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTEL 221 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCc
Confidence 7 89999888653 368999999999999874
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.7e-16 Score=119.35 Aligned_cols=142 Identities=20% Similarity=0.260 Sum_probs=101.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++...... ..+.+...++.++.+|+.|++++.++++.. ++|+
T Consensus 28 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 102 (277)
T 2rhc_B 28 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-----KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV 102 (277)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999865422110 111122346889999999999988887642 6999
Q ss_pred EEeccCCCccc------------------------hHHHHHh--CC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREADE------------------------VEPILDA--LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~--~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|||+||..... ++.++.. ++ +..+||++||...+... .+..
T Consensus 103 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~ 171 (277)
T 2rhc_B 103 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV-----------VHAA 171 (277)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC-----------TTCH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC-----------CCCc
Confidence 99999864211 2223333 33 45799999997654211 1223
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..++++++++||++.++.
T Consensus 172 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 210 (277)
T 2rhc_B 172 PYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPM 210 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCch
Confidence 46 89999887653 258999999999998873
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=4.1e-16 Score=116.85 Aligned_cols=136 Identities=21% Similarity=0.196 Sum_probs=99.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++.... ..+...++.++.+|+.|+++++++++.. ++|+
T Consensus 15 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 85 (270)
T 1yde_A 15 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGRA---------LEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC 85 (270)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999997654211 1111234788999999999998887643 7999
Q ss_pred EEeccCCCcc---------------------c----hHHHHHhCC-CCCcEEEEeccee-cccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD---------------------E----VEPILDALP-NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~---------------------~----~~~ll~~~~-~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+||.... + ++.++..++ ...+||++||... ++.. ....
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~ 153 (270)
T 1yde_A 86 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA------------QAVP 153 (270)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT------------TCHH
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC------------CCcc
Confidence 9999986421 0 122233333 3579999999654 3211 1234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..++++++++||+++++
T Consensus 154 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~ 190 (270)
T 1yde_A 154 YVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTP 190 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred cHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccc
Confidence 6 89999887653 36899999999999987
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=6.6e-16 Score=117.22 Aligned_cols=143 Identities=17% Similarity=0.167 Sum_probs=101.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccC---ceEEEeecCCCHHHHHhhhhcc-----C
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~l~~~~~~~-----~ 72 (197)
|||+|+||.+++++|+++|++|++++|++++..... ..+..... ++.++.+|+.|++++.++++.. +
T Consensus 32 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 106 (297)
T 1xhl_A 32 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK-----QQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK 106 (297)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 799999999999999999999999999865422110 11111122 6889999999999998887642 7
Q ss_pred ccEEEeccCCCccc--------------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 73 FDVVYDINGREADE--------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 73 ~d~vi~~a~~~~~~--------------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
+|+|||+||..... ++.++..++ ...+||++||...+.... .+
T Consensus 107 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~----------~~ 176 (297)
T 1xhl_A 107 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH----------SG 176 (297)
T ss_dssp CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC----------TT
T ss_pred CCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCC----------CC
Confidence 99999999863211 122333343 227999999977653210 12
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ ..++++++++||++.++.
T Consensus 177 ~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~ 217 (297)
T 1xhl_A 177 YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF 217 (297)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcc
Confidence 2346 89999887653 468999999999999873
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.4e-16 Score=117.88 Aligned_cols=142 Identities=20% Similarity=0.148 Sum_probs=102.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhcc---CceEEEeecCCCHHHHHhhhhcc-----C
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS---SKILHLKGDRKDYDFVKSSLSAK-----G 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~l~~~~~~~-----~ 72 (197)
|||+|+||.+++++|+++|++|++++|+++...... .++.+.. ..+.++.+|+.|++++.++++.. +
T Consensus 17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 91 (281)
T 3svt_A 17 TGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAV-----QELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGR 91 (281)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 799999999999999999999999999865432111 1111111 26889999999999998888643 7
Q ss_pred ccEEEeccCCC-cc--------------------chHHHH----HhCC--CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 73 FDVVYDINGRE-AD--------------------EVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 73 ~d~vi~~a~~~-~~--------------------~~~~ll----~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
+|++||+||.. .. ++..++ ..+. +..+||++||...+... .+
T Consensus 92 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 160 (281)
T 3svt_A 92 LHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH-----------RW 160 (281)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC-----------TT
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC-----------CC
Confidence 99999999962 10 112223 3332 34599999998765321 12
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 161 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 201 (281)
T 3svt_A 161 FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDL 201 (281)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence 3457 99999988753 357999999999999874
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=7.4e-16 Score=115.98 Aligned_cols=143 Identities=15% Similarity=0.128 Sum_probs=101.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccC---ceEEEeecCCCHHHHHhhhhcc-----C
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~l~~~~~~~-----~ 72 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+..... ++.++.+|+.|+++++++++.. +
T Consensus 12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (280)
T 1xkq_A 12 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-----QIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK 86 (280)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 799999999999999999999999999865422110 01111112 6889999999999998887642 7
Q ss_pred ccEEEeccCCCccc----------------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCC
Q 029198 73 FDVVYDINGREADE----------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV 123 (197)
Q Consensus 73 ~d~vi~~a~~~~~~----------------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 123 (197)
+|+|||+||..... ++.++..++ ...+||++||...+... .
T Consensus 87 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 156 (280)
T 1xkq_A 87 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA----------Q 156 (280)
T ss_dssp CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC----------C
T ss_pred CCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCC----------C
Confidence 99999999864210 112233333 12799999997765321 0
Q ss_pred CCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+...| .+|...+.+.+ ..++++++++||++.++.
T Consensus 157 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (280)
T 1xkq_A 157 PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF 199 (280)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCc
Confidence 123346 89999887653 368999999999999874
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.5e-16 Score=118.19 Aligned_cols=140 Identities=17% Similarity=0.108 Sum_probs=95.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc--CccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~--~~d~vi~ 78 (197)
|||+|+||.+++++|+++|++|++++|++++... . +.+|+.|+++++++++.. ++|+|||
T Consensus 7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----------------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~ 68 (257)
T 1fjh_A 7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-----------------D-LSTAEGRKQAIADVLAKCSKGMDGLVL 68 (257)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------------C-TTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-----------------c-cccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence 7999999999999999999999999998765211 1 568999999999988743 6799999
Q ss_pred ccCCCc-c------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCC-----------------CC
Q 029198 79 INGREA-D------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCET-----------------DT 122 (197)
Q Consensus 79 ~a~~~~-~------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~-----------------~~ 122 (197)
+||... . + ++.++..++ +..+||++||...+......+..+. .+
T Consensus 69 ~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (257)
T 1fjh_A 69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE 148 (257)
T ss_dssp CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred CCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccC
Confidence 999754 1 1 223344443 5589999999887732110000000 01
Q ss_pred CCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
..+...| .+|...+.+.+ ..++++++++||++.++.
T Consensus 149 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 192 (257)
T 1fjh_A 149 QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL 192 (257)
T ss_dssp THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcc
Confidence 1122346 89999888753 368999999999998874
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.4e-16 Score=117.05 Aligned_cols=141 Identities=15% Similarity=0.180 Sum_probs=101.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... .++.. ..++.++.+|+.|++++.++++.. ++|+
T Consensus 35 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 108 (276)
T 2b4q_A 35 TGGSRGIGQMIAQGLLEAGARVFICARDAEACADTA-----TRLSA-YGDCQAIPADLSSEAGARRLAQALGELSARLDI 108 (276)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----HHHTT-SSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHh-cCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999865422110 01111 126888999999999998887642 7999
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--CC----CcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--NL----EQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~----~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|||+||.... + ++.++..++ +. .+||++||...+.... .
T Consensus 109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~-----------~ 177 (276)
T 2b4q_A 109 LVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG-----------E 177 (276)
T ss_dssp EEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC-----------C
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC-----------C
Confidence 9999986321 0 233444443 33 7999999987653211 1
Q ss_pred CC-cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 KS-RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~-~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.. .| .+|...+.+.+ ..++++++++||++.++.
T Consensus 178 ~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 219 (276)
T 2b4q_A 178 QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRM 219 (276)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTT
T ss_pred CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcc
Confidence 22 46 89999987653 358999999999998874
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=3.7e-16 Score=116.69 Aligned_cols=142 Identities=18% Similarity=0.192 Sum_probs=102.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.+...... ..+.+...++.++.+|+.|++++.++++.. ++|+
T Consensus 17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 91 (264)
T 3ucx_A 17 SGVGPALGTTLARRCAEQGADLVLAARTVERLEDVA-----KQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDV 91 (264)
T ss_dssp ESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 799999999999999999999999999865432111 122223457899999999999998887643 7999
Q ss_pred EEeccCCCcc---------------------chHHHHHhC----C-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD---------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~---------------------~~~~ll~~~----~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||.... ++..+++++ + ...+||++||...+... .+...|
T Consensus 92 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 160 (264)
T 3ucx_A 92 VINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQ-----------AKYGAY 160 (264)
T ss_dssp EEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCC-----------TTCHHH
T ss_pred EEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCC-----------CccHHH
Confidence 9999976311 122233333 3 23699999997765221 122346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||+++++.
T Consensus 161 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 197 (264)
T 3ucx_A 161 KMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGT 197 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHH
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccccc
Confidence 89999887653 368999999999998873
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.7e-16 Score=117.92 Aligned_cols=142 Identities=13% Similarity=0.153 Sum_probs=104.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++...... .++.+...++.++.+|+.|++++.++++.. ++|+
T Consensus 32 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (271)
T 4ibo_A 32 TGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTV-----QEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDI 106 (271)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 799999999999999999999999999765432111 122223457899999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||..... ++.++..++ +..+||++||...+.. ..+...|
T Consensus 107 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~-----------~~~~~~Y 175 (271)
T 4ibo_A 107 LVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA-----------RATVAPY 175 (271)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-----------CTTCHHH
T ss_pred EEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC-----------CCCchhH
Confidence 99999974211 222344444 5579999999665421 1123457
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||++.++.
T Consensus 176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 212 (271)
T 4ibo_A 176 TVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDM 212 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcc
Confidence 89999887653 368999999999999874
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.63 E-value=4.7e-16 Score=117.16 Aligned_cols=143 Identities=24% Similarity=0.302 Sum_probs=100.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc-cCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|+||.+++++|+++|++|++++|+......... ..+... ...+.++.+|+.|++++.++++.. ++|
T Consensus 31 TGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 106 (281)
T 3v2h_A 31 TGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVT----DEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGAD 106 (281)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHH----HHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCS
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCC
Confidence 7999999999999999999999999995432111100 011111 357899999999999998887643 799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+|||+||..... ++.++..++ +..+||++||...+... .....
T Consensus 107 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 175 (281)
T 3v2h_A 107 ILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS-----------PFKSA 175 (281)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC-----------CCchH
Confidence 999999974211 222333334 56789999997664221 11234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 176 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 213 (281)
T 3v2h_A 176 YVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPL 213 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcc
Confidence 6 89999887753 358999999999999874
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.63 E-value=6.1e-16 Score=117.64 Aligned_cols=141 Identities=16% Similarity=0.189 Sum_probs=102.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.+...... ..+.....++.++.+|+.|.+++.++++.. ++|+
T Consensus 37 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 111 (301)
T 3tjr_A 37 TGGASGIGLATATEFARRGARLVLSDVDQPALEQAV-----NGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDV 111 (301)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence 799999999999999999999999999866532111 112222357899999999999998887643 7999
Q ss_pred EEeccCCCcc--------------------ch----HHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------EV----EPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~----~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+||.... ++ +.++..++ + ..+||++||...+... .....
T Consensus 112 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 180 (301)
T 3tjr_A 112 VFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN-----------AGLGT 180 (301)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC-----------TTBHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC-----------CCchH
Confidence 9999996421 12 22333333 3 5699999997765211 12334
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..|++++.++||++..+
T Consensus 181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 217 (301)
T 3tjr_A 181 YGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETK 217 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccc
Confidence 6 89998887653 35899999999999876
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.63 E-value=4.2e-16 Score=117.34 Aligned_cols=141 Identities=16% Similarity=0.204 Sum_probs=102.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++...... ..+.....++.++.+|+.|++++.++++.. ++|+
T Consensus 30 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 104 (279)
T 3sju_A 30 TGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV-----DGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGI 104 (279)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 799999999999999999999999999865432111 112222457899999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHh--CC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREADE------------------------VEPILDA--LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~--~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|||+||..... ++.++.. ++ +..+||++||...+... ....
T Consensus 105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~~~~ 173 (279)
T 3sju_A 105 LVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGV-----------MYAA 173 (279)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC-----------TTCH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCC-----------CCCh
Confidence 99999974211 2233342 23 55799999997764211 1223
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.| .+|...+.+.+ ..+++++.++||++.++
T Consensus 174 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 211 (279)
T 3sju_A 174 PYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETP 211 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccch
Confidence 46 89998887653 36899999999999876
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-15 Score=114.39 Aligned_cols=141 Identities=16% Similarity=0.136 Sum_probs=100.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++...... ..+.. ..++.++.+|+.|++++.++++.. ++|+
T Consensus 27 TGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~-----~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 100 (272)
T 2nwq_A 27 TGATSGFGEACARRFAEAGWSLVLTGRREERLQALA-----GELSA-KTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG 100 (272)
T ss_dssp SSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHTT-TSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHhhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999865422110 00111 136889999999999999988743 5799
Q ss_pred EEeccCCCcc---------------------c----hHHHHHhCC--CCC-cEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD---------------------E----VEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~---------------------~----~~~ll~~~~--~~~-~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|||+||.... + ++.++..++ +.. +||++||...+... ....
T Consensus 101 lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~-----------~~~~ 169 (272)
T 2nwq_A 101 LINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY-----------PGSH 169 (272)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCC-----------TTCH
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCC-----------CCCc
Confidence 9999986421 1 233455554 556 99999997764211 1223
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 170 ~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 208 (272)
T 2nwq_A 170 VYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF 208 (272)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred hHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence 46 89999988764 358999999999998774
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.63 E-value=7.4e-16 Score=115.50 Aligned_cols=144 Identities=19% Similarity=0.218 Sum_probs=97.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|+++.+........+ ...+.+...++.++.+|+.|++++.++++.. ++|+
T Consensus 32 TGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~ 107 (272)
T 4e3z_A 32 TGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAV----VAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDG 107 (272)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHH----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 799999999999999999999988744332211110 0112223457899999999999998887643 7999
Q ss_pred EEeccCCCcc-c------------------------hHHHHHhCC-----CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD-E------------------------VEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 76 vi~~a~~~~~-~------------------------~~~ll~~~~-----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|||+||.... . ++.++..++ +..+||++||...+.... ..
T Consensus 108 li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~ 177 (272)
T 4e3z_A 108 LVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA----------TQ 177 (272)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT----------TT
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC----------CC
Confidence 9999986421 0 122233332 245799999977643211 01
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 178 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 218 (272)
T 4e3z_A 178 YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDL 218 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCc
Confidence 2346 89999887653 358999999999999874
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-15 Score=114.53 Aligned_cols=141 Identities=14% Similarity=0.131 Sum_probs=103.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc----CccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~----~~d~v 76 (197)
|||+|+||.+++++|+++|++|++++|+++...... .++.....++.++.+|+.|.+++.++++.. ++|++
T Consensus 39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~l 113 (275)
T 4imr_A 39 TGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQ-----QRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDIL 113 (275)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHH-----HHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEE
Confidence 899999999999999999999999999876532211 122233467899999999998888777532 79999
Q ss_pred EeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 77 YDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 77 i~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
||+||..... ++.++..++ +..+||++||...+.. ..+...|
T Consensus 114 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y~ 182 (275)
T 4imr_A 114 VINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRP-----------KSVVTAYA 182 (275)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTBHHHH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC-----------CCCchhhH
Confidence 9999964211 223344444 5679999999776531 1122346
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..+++++.++||++..+
T Consensus 183 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 217 (275)
T 4imr_A 183 ATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTD 217 (275)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCc
Confidence 89999887653 35899999999999876
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.63 E-value=7.2e-16 Score=115.13 Aligned_cols=142 Identities=20% Similarity=0.175 Sum_probs=100.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++...... ..+......+.++.+|+.|++++.++++.. ++|+
T Consensus 10 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 84 (264)
T 3tfo_A 10 TGASGGIGEGIARELGVAGAKILLGARRQARIEAIA-----TEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDV 84 (264)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 899999999999999999999999999865432111 122222457889999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..++ +..+||++||...+... .....|
T Consensus 85 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-----------~~~~~Y 153 (264)
T 3tfo_A 85 LVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV-----------PTAAVY 153 (264)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----------TTCHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC-----------CCChhH
Confidence 99999874211 233444444 56799999997765221 112346
Q ss_pred -hhhhhHHHHHhh-----cCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLES-----KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~~-----~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+. .+++++.++||++..+.
T Consensus 154 ~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~ 188 (264)
T 3tfo_A 154 CATKFAVRAISDGLRQESTNIRVTCVNPGVVESEL 188 (264)
T ss_dssp HHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcc
Confidence 899988876532 38999999999998763
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.63 E-value=8.6e-16 Score=114.04 Aligned_cols=131 Identities=21% Similarity=0.275 Sum_probs=96.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++.. ..+.++.+|+.|+++++++++.. ++|+
T Consensus 27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~ 90 (253)
T 2nm0_A 27 TGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------------EGFLAVKCDITDTEQVEQAYKEIEETHGPVEV 90 (253)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------------ccceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999976542 23788999999999998887632 5899
Q ss_pred EEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||.... + ++.++..++ +..+||++||...+... .....|
T Consensus 91 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 159 (253)
T 2nm0_A 91 LIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS-----------AGQANY 159 (253)
T ss_dssp EEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH-----------HHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-----------CCcHHH
Confidence 9999986321 0 122333443 56799999997654210 012346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++++++++||++..+.
T Consensus 160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 196 (253)
T 2nm0_A 160 AASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDM 196 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC--
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence 88998887653 358999999999998763
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.9e-15 Score=112.17 Aligned_cols=140 Identities=23% Similarity=0.157 Sum_probs=99.5
Q ss_pred CCcccchHHHHHHHHHHCCCe-EEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCH-HHHHhhhhcc-----
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDY-DFVKSSLSAK----- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~-~~l~~~~~~~----- 71 (197)
|||+|++|.+++++|+++|++ |++++|++.... . .++.+. ..++.++.+|+.|+ +++.++++..
T Consensus 11 tGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~--~-----~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 83 (254)
T 1sby_A 11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPTA--L-----AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH--H-----HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred ECCCChHHHHHHHHHHHCCCcEEEEEecCchHHH--H-----HHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence 799999999999999999996 999999864210 0 111111 24688999999998 8887776532
Q ss_pred CccEEEeccCCCcc------------ch----HHHHHhCC-C----CCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 72 GFDVVYDINGREAD------------EV----EPILDALP-N----LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 72 ~~d~vi~~a~~~~~------------~~----~~ll~~~~-~----~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
++|+|||+||.... ++ +.++..+. . ..+||++||...+... .+...|
T Consensus 84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~ 152 (254)
T 1sby_A 84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI-----------HQVPVYS 152 (254)
T ss_dssp CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TTSHHHH
T ss_pred CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC-----------CCchHHH
Confidence 79999999986421 12 22333343 2 3579999998775321 123346
Q ss_pred hhhhhHHHHHhh-------cCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLES-------KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~~-------~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+. .++++++++||++.++.
T Consensus 153 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~ 188 (254)
T 1sby_A 153 ASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL 188 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred HHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcc
Confidence 899999887532 68999999999998863
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.63 E-value=5.4e-16 Score=116.78 Aligned_cols=143 Identities=18% Similarity=0.202 Sum_probs=103.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++...... ..+.....++.++.+|+.|++++.++++.. ++|+
T Consensus 14 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 88 (280)
T 3tox_A 14 TGASSGIGRAAALLFAREGAKVVVTARNGNALAELT-----DEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDT 88 (280)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 899999999999999999999999999865432111 111222357899999999999998887642 7999
Q ss_pred EEeccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||.... + ++.++..++ +..+||++||...+... ..+...
T Consensus 89 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~ 158 (280)
T 3tox_A 89 AFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAG----------FAGVAP 158 (280)
T ss_dssp EEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBC----------CTTCHH
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCC----------CCCchh
Confidence 9999986411 0 222333333 45699999997765211 112334
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 159 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 196 (280)
T 3tox_A 159 YAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPA 196 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTT
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCch
Confidence 7 89999887653 358999999999999875
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=2.2e-15 Score=111.26 Aligned_cols=136 Identities=18% Similarity=0.176 Sum_probs=100.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++++.... .+.. ++.++.+|+.|+++++++++.. ++|+
T Consensus 11 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~---------~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 80 (245)
T 1uls_A 11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREA---------AEAV-GAHPVVMDVADPASVERGFAEALAHLGRLDG 80 (245)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHTT-TCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HHHc-CCEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999976542211 1101 3788999999999998887642 6999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||..... ++.++..++ +..+||++||...++.. ....|
T Consensus 81 lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~~~Y 148 (245)
T 1uls_A 81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL------------GQANY 148 (245)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT------------TCHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC------------CchhH
Confidence 99999864211 233445554 56799999997743221 12346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++++++++||++.++.
T Consensus 149 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 185 (245)
T 1uls_A 149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM 185 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcc
Confidence 88988877643 368999999999998874
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=5.7e-16 Score=115.54 Aligned_cols=141 Identities=13% Similarity=0.149 Sum_probs=100.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+.....++.++.+|+.|++++.++++.. ++|+
T Consensus 13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 87 (262)
T 1zem_A 13 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAE-----ASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF 87 (262)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999865422110 111122346889999999999988877643 7999
Q ss_pred EEeccCCC-cc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGRE-AD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~-~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+||.. .. + ++.++..++ +..+||++||...+... .....
T Consensus 88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 156 (262)
T 1zem_A 88 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP-----------PNMAA 156 (262)
T ss_dssp EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----------TTBHH
T ss_pred EEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----------CCCch
Confidence 99999864 11 0 122333333 45799999997665321 11234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..++++++++||++..+
T Consensus 157 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 157 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence 6 88988877643 46899999999998776
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.62 E-value=9.6e-16 Score=113.89 Aligned_cols=139 Identities=24% Similarity=0.241 Sum_probs=102.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++..... ..+...++.++.+|+.|++++.++++.. ++|+
T Consensus 14 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 14 IGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARI--------REEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 79999999999999999999999999986542211 1122357899999999999988877542 7999
Q ss_pred EEeccCCCccc--------------------hHHHHHhC----CCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREADE--------------------VEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~~--------------------~~~ll~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
+||+||..... +..+.+++ +...+||++||...+... .+...| .
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~a 154 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH-----------PGMSVYSA 154 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC-----------TTBHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-----------CCchHHHH
Confidence 99999874221 12233333 233589999997765321 123457 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+|...+.+.+ ..|++++.++||++.++.
T Consensus 155 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 189 (255)
T 4eso_A 155 SKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPT 189 (255)
T ss_dssp HHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSS
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcc
Confidence 9999887653 358999999999999885
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.62 E-value=8.2e-16 Score=117.83 Aligned_cols=142 Identities=13% Similarity=0.158 Sum_probs=98.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhcc--CceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS--SKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|+||.+++++|+++|++|++++|+.++..... ..+.... ..+.++.+|+.|++++.++++.. ++
T Consensus 14 TGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (319)
T 3ioy_A 14 TGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKAL-----ATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPV 88 (319)
T ss_dssp ETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred cCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence 799999999999999999999999999876532111 1111111 27899999999999998887643 78
Q ss_pred cEEEeccCCCcc--------------------chHHHHHh----CC--------CCCcEEEEecceecccCCCCCCCCCC
Q 029198 74 DVVYDINGREAD--------------------EVEPILDA----LP--------NLEQFIYCSSAGVYLKSDLLPHCETD 121 (197)
Q Consensus 74 d~vi~~a~~~~~--------------------~~~~ll~~----~~--------~~~~~v~~Ss~~vyg~~~~~~~~e~~ 121 (197)
|+|||+||.... ++.+++++ +. +..+||++||...+....
T Consensus 89 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~-------- 160 (319)
T 3ioy_A 89 SILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG-------- 160 (319)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS--------
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC--------
Confidence 999999996321 12222322 21 145799999977653211
Q ss_pred CCCCCCcc-hhhhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 122 TVDPKSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 122 ~~~~~~~~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
....| .+|...+.+. ...++++++++||++.++.
T Consensus 161 ---~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 202 (319)
T 3ioy_A 161 ---SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYI 202 (319)
T ss_dssp ---SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCc
Confidence 12346 8999666553 3468999999999998864
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.7e-15 Score=113.18 Aligned_cols=130 Identities=19% Similarity=0.204 Sum_probs=97.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.+... ....+.+|+.|.+++.++++.. ++|+
T Consensus 34 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~----------------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~ 97 (266)
T 3uxy_A 34 TGAAGGIGGAVVTALRAAGARVAVADRAVAGIA----------------ADLHLPGDLREAAYADGLPGAVAAGLGRLDI 97 (266)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC----------------CSEECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------------hhhccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 899999999999999999999999999866522 1234578999999888776532 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..++ +..+||++||...+... .+...|
T Consensus 98 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 166 (266)
T 3uxy_A 98 VVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPG-----------PGHALY 166 (266)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCC-----------TTBHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC-----------CCChHH
Confidence 99999975321 222333344 56799999997664211 123347
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..+++++.++||++.++
T Consensus 167 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 202 (266)
T 3uxy_A 167 CLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTP 202 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcch
Confidence 89999887653 35899999999999886
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.62 E-value=5.1e-16 Score=116.35 Aligned_cols=141 Identities=15% Similarity=0.125 Sum_probs=102.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++...... ..+.....++.++.+|+.|++++.++++.. ++|+
T Consensus 34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 108 (270)
T 3ftp_A 34 TGASRGIGRAIALELARRGAMVIGTATTEAGAEGIG-----AAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNV 108 (270)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 899999999999999999999999999765422110 112222356889999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..+. +..+||++||...+... .+...|
T Consensus 109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 177 (270)
T 3ftp_A 109 LVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN-----------PGQVNY 177 (270)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTBHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC-----------CCchhH
Confidence 99999864221 222333333 55689999997654321 123346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..+++++.++||++.++
T Consensus 178 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 213 (270)
T 3ftp_A 178 AAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTD 213 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSH
T ss_pred HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCc
Confidence 89998887653 36899999999999876
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=1e-15 Score=115.28 Aligned_cols=148 Identities=16% Similarity=0.106 Sum_probs=103.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCC-C-------chhhhhccCceEEEeecCCCHHHHHhhhhcc-
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE-S-------DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~- 71 (197)
|||+|+||.+++++|+++|++|++++|+.+......... . ...+.....++.++.+|+.|+++++++++..
T Consensus 21 TGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 100 (280)
T 3pgx_A 21 TGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGM 100 (280)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 799999999999999999999999999643211100000 0 0111222457889999999999998887643
Q ss_pred ----CccEEEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCC
Q 029198 72 ----GFDVVYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCET 120 (197)
Q Consensus 72 ----~~d~vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~ 120 (197)
++|++||+||..... ++.++..++ + ..+||++||...+...
T Consensus 101 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 172 (280)
T 3pgx_A 101 EQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT-------- 172 (280)
T ss_dssp HHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC--------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC--------
Confidence 799999999974211 222334343 3 5689999997765221
Q ss_pred CCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCCC
Q 029198 121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~~ 159 (197)
.....| .+|...+.+.+ ..+++++.++||++.++..
T Consensus 173 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 216 (280)
T 3pgx_A 173 ---PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMI 216 (280)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTC
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCccc
Confidence 123347 89999887653 3689999999999999853
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2.7e-15 Score=112.36 Aligned_cols=144 Identities=16% Similarity=0.121 Sum_probs=102.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++++........ ...+.....++.++.+|+.|++++.++++.. ++|+
T Consensus 24 TGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 99 (270)
T 3is3_A 24 TGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKV----VSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDI 99 (270)
T ss_dssp SCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 899999999999999999999999887654321111 0122233467899999999999998888643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
+||+||..... ++.++..++...+||++||..... ....+...| .
T Consensus 100 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~~~~Y~a 169 (270)
T 3is3_A 100 AVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD----------FSVPKHSLYSG 169 (270)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT----------CCCTTCHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc----------CCCCCCchhHH
Confidence 99999974211 223344444445899999965210 011123447 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+|...+.+.+ ..+++++.++||++.++.
T Consensus 170 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 204 (270)
T 3is3_A 170 SKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM 204 (270)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTT
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence 9999887653 368999999999999874
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.4e-15 Score=114.35 Aligned_cols=143 Identities=15% Similarity=0.122 Sum_probs=103.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+.....++.++.+|+.|++++.++++.. ++|+
T Consensus 40 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 114 (279)
T 3ctm_A 40 TGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAE-----HLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDV 114 (279)
T ss_dssp TTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHH-----HHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999866522110 111122356889999999999998887631 5999
Q ss_pred EEeccCCCcc------c--------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD------E--------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~------~--------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|||+||.... . ++.+++.++ +..+||++||...+... ...+..
T Consensus 115 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~~~ 185 (279)
T 3ctm_A 115 FVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN---------IPQLQA 185 (279)
T ss_dssp EEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------------CCHH
T ss_pred EEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC---------CCCCcc
Confidence 9999985322 1 345666665 67899999997654210 011233
Q ss_pred cc-hhhhhHHHHHhh-------cCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLES-------KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~~-------~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+. .+ ++++++||++.++.
T Consensus 186 ~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~ 223 (279)
T 3ctm_A 186 PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDI 223 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTT
T ss_pred cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccc
Confidence 46 899999887642 46 99999999998874
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.62 E-value=8.2e-16 Score=115.21 Aligned_cols=143 Identities=17% Similarity=0.185 Sum_probs=103.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+..+....+. ..+.....++.++.+|+.|++++.++++.. ++|+
T Consensus 35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 110 (271)
T 4iin_A 35 TGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALK----NELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSY 110 (271)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 7999999999999999999999999996544221110 112223457899999999999998887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||..... ++.++..++ +..+||++||...+... .+...|
T Consensus 111 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 179 (271)
T 4iin_A 111 LVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN-----------MGQTNY 179 (271)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTCHHH
T ss_pred EEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC-----------CCchHh
Confidence 99999974211 233444444 55799999997654221 123456
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||++..+.
T Consensus 180 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 216 (271)
T 4iin_A 180 SASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDM 216 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCc
Confidence 89999887653 368999999999998863
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=3.7e-15 Score=111.10 Aligned_cols=139 Identities=15% Similarity=0.161 Sum_probs=100.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+.+..... ..+...++.++.+|+.|++++.++++.. ++|+
T Consensus 18 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 89 (265)
T 2o23_A 18 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ--------AKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 89 (265)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHH--------HHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 79999999999999999999999999987653211 1112357899999999999998887643 7999
Q ss_pred EEeccCCCcc------------c--------------h----HHHHHhCC--------CCCcEEEEecceecccCCCCCC
Q 029198 76 VYDINGREAD------------E--------------V----EPILDALP--------NLEQFIYCSSAGVYLKSDLLPH 117 (197)
Q Consensus 76 vi~~a~~~~~------------~--------------~----~~ll~~~~--------~~~~~v~~Ss~~vyg~~~~~~~ 117 (197)
|||+||.... . + +.++..++ +..+||++||...+...
T Consensus 90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----- 164 (265)
T 2o23_A 90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ----- 164 (265)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-----
T ss_pred EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC-----
Confidence 9999986311 1 1 12233332 24689999998765321
Q ss_pred CCCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 118 CETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 118 ~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+...| .+|...+.+.+ ..++++++++||++.++.
T Consensus 165 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 207 (265)
T 2o23_A 165 ------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 207 (265)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcc
Confidence 123346 88998877653 358999999999998874
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.62 E-value=5.8e-16 Score=113.96 Aligned_cols=135 Identities=18% Similarity=0.245 Sum_probs=98.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++++.. .+. ++.++.+|+.| +++.++++. .++|+
T Consensus 8 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~~--~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~ 73 (239)
T 2ekp_A 8 TGGSRGIGRAIAEALVARGYRVAIASRNPEEAA-----------QSL--GAVPLPTDLEK-DDPKGLVKRALEALGGLHV 73 (239)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH-----------HHH--TCEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------Hhh--CcEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865411 111 27888999998 766665542 27999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..++ +..+||++||...+.... ..+...|
T Consensus 74 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~~~Y 144 (239)
T 2ekp_A 74 LVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG---------PVPIPAY 144 (239)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------TSCCHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC---------CCCCccH
Confidence 99999864211 233444444 678999999987764321 1123457
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..++++++++||++.++.
T Consensus 145 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 181 (239)
T 2ekp_A 145 TTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEF 181 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCch
Confidence 89999887653 358999999999998874
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.7e-15 Score=111.26 Aligned_cols=139 Identities=18% Similarity=0.168 Sum_probs=101.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++...... .+...++.++.+|+.|+++++++++.. ++|+
T Consensus 9 TGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 9 TGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE--------LLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 799999999999999999999999999865432110 111236899999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
+||+||..... ++.++..++ ...++|++||...+... .....|
T Consensus 81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y~ 149 (235)
T 3l6e_A 81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK-----------ANESLYC 149 (235)
T ss_dssp EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC-----------SSHHHHH
T ss_pred EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC-----------CCCcHHH
Confidence 99999974211 233445554 33499999997654211 112346
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||++..+.
T Consensus 150 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 185 (235)
T 3l6e_A 150 ASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEF 185 (235)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcc
Confidence 89999887653 358999999999998764
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.2e-15 Score=112.01 Aligned_cols=144 Identities=19% Similarity=0.229 Sum_probs=102.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++++.......+ ...+.....++.++.+|+.|+++++++++.. ++|+
T Consensus 37 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 112 (271)
T 3v2g_A 37 TGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAV----VSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDI 112 (271)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 799999999999999999999999987653321111 0122223457899999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
+||+||..... ++.++..++...+||++||...... +..+...| .
T Consensus 113 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~----------~~~~~~~Y~a 182 (271)
T 3v2g_A 113 LVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV----------PWPGISLYSA 182 (271)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC----------CSTTCHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC----------CCCCchHHHH
Confidence 99999874211 2233444444569999998543211 01123357 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+|...+.+.+ ..+++++.++||++.++.
T Consensus 183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 217 (271)
T 3v2g_A 183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDM 217 (271)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSS
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCc
Confidence 9999887653 358999999999999875
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.9e-15 Score=113.32 Aligned_cols=139 Identities=17% Similarity=0.153 Sum_probs=101.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.+..... ..+...++.++.+|+.|++++.++++.. ++|+
T Consensus 34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 105 (272)
T 4dyv_A 34 TGAGSGVGRAVAVALAGAGYGVALAGRRLDALQET--------AAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV 105 (272)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986543211 1122357899999999999998887643 7999
Q ss_pred EEeccCCCcc---------------------c----hHHHHHhCC--C--CCcEEEEecceecccCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 76 vi~~a~~~~~---------------------~----~~~ll~~~~--~--~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 126 (197)
|||+||.... + ++.++..++ + ..+||++||...+.. ..+.
T Consensus 106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----------~~~~ 174 (272)
T 4dyv_A 106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP-----------RPYS 174 (272)
T ss_dssp EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC-----------CTTC
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC-----------CCCc
Confidence 9999997421 0 233444444 2 469999999765421 1123
Q ss_pred Ccc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
..| .+|...+.+.+ ..++++..++||++..+.
T Consensus 175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 214 (272)
T 4dyv_A 175 APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPM 214 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---
T ss_pred hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChh
Confidence 347 89999888753 368999999999998874
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.61 E-value=5.4e-15 Score=111.51 Aligned_cols=141 Identities=13% Similarity=0.053 Sum_probs=100.1
Q ss_pred CCcc--cchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGat--G~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+ |+||.+++++|+++|++|++++|+++. ...+ .++....+.+.++.+|+.|+++++++++.. ++
T Consensus 27 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 100 (285)
T 2p91_A 27 TGVANERSIAYGIAKSFHREGAQLAFTYATPKL-EKRV-----REIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSL 100 (285)
T ss_dssp CCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred ECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHH-HHHH-----HHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 7998 999999999999999999999997631 1110 111111234788999999999998887643 79
Q ss_pred cEEEeccCCCcc------------------------chHHHHH----hCC-CCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD------------------------EVEPILD----ALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 74 d~vi~~a~~~~~------------------------~~~~ll~----~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
|+|||+||.... ++..+++ .++ ...+||++||...+... .
T Consensus 101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 169 (285)
T 2p91_A 101 DIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV-----------P 169 (285)
T ss_dssp CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC-----------T
T ss_pred CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC-----------C
Confidence 999999986421 0122333 333 34699999997654221 1
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+...| .+|...+.+.+ ..++++++++||+++++.
T Consensus 170 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 211 (285)
T 2p91_A 170 HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLA 211 (285)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSC
T ss_pred CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCch
Confidence 23346 89999887653 358999999999999985
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.4e-15 Score=114.14 Aligned_cols=141 Identities=16% Similarity=0.149 Sum_probs=101.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc----cCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~----~~~d~v 76 (197)
|||+|+||.+++++|+++|++|++++|.+.. ... ..++.....++.++.+|+.|.+++.++.+. -++|+|
T Consensus 37 TGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~l 110 (273)
T 3uf0_A 37 TGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEV-----ADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVL 110 (273)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSTHH-HHH-----HHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEcCHHHH-HHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEE
Confidence 7999999999999999999999999975322 110 011222345789999999999988877432 279999
Q ss_pred EeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 77 YDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 77 i~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
||+||..... ++.++..++ +..+||++||...+... .+...|
T Consensus 111 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-----------~~~~~Y~ 179 (273)
T 3uf0_A 111 VNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG-----------RNVAAYA 179 (273)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------SSCHHHH
T ss_pred EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC-----------CCChhHH
Confidence 9999874221 222333444 56799999997765221 123346
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||++.++.
T Consensus 180 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 215 (273)
T 3uf0_A 180 ASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTAN 215 (273)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence 89999887653 368999999999999874
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.3e-15 Score=114.82 Aligned_cols=144 Identities=15% Similarity=0.123 Sum_probs=103.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.+...... .++.....++.++.+|+.|++++.++++.. ++|+
T Consensus 34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 108 (283)
T 3v8b_A 34 TGAGSGIGRATALALAADGVTVGALGRTRTEVEEVA-----DEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDI 108 (283)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999865432111 112222357899999999999998887643 7999
Q ss_pred EEeccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||.... + ++.++..++ +..+||++||...+... +..+...
T Consensus 109 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~---------~~~~~~~ 179 (283)
T 3v8b_A 109 VVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF---------TTPGATA 179 (283)
T ss_dssp EEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC---------CSTTCHH
T ss_pred EEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC---------CCCCchH
Confidence 9999996321 1 222334344 56799999997654211 0112334
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..++++..++||++..+.
T Consensus 180 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 217 (283)
T 3v8b_A 180 YTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNI 217 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCT
T ss_pred HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCc
Confidence 6 89999887753 357999999999998874
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.5e-15 Score=112.50 Aligned_cols=131 Identities=15% Similarity=0.172 Sum_probs=94.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||+|++|.+++++|+++|++|++++|+++... +. ..+.++ +|+ .+++.++++.. ++|+|||+
T Consensus 25 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~-~~~~~~-~D~--~~~~~~~~~~~~~iD~lv~~ 88 (249)
T 1o5i_A 25 LAASRGIGRAVADVLSQEGAEVTICARNEELLK------------RS-GHRYVV-CDL--RKDLDLLFEKVKEVDILVLN 88 (249)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH------------HT-CSEEEE-CCT--TTCHHHHHHHSCCCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH------------hh-CCeEEE-eeH--HHHHHHHHHHhcCCCEEEEC
Confidence 799999999999999999999999999763211 11 246666 998 33344444332 89999999
Q ss_pred cCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhh
Q 029198 80 NGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK 132 (197)
Q Consensus 80 a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k 132 (197)
||..... ++.+++.++ +..+||++||...+... .+...| .+|
T Consensus 89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sK 157 (249)
T 1o5i_A 89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI-----------ENLYTSNSAR 157 (249)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHHHHHHH
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC-----------CCCchHHHHH
Confidence 9864221 334556665 66899999998876421 122346 889
Q ss_pred hhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 133 LNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 133 ~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...+.+.+ ..++++++++||+++++.
T Consensus 158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 190 (249)
T 1o5i_A 158 MALTGFLKTLSFEVAPYGITVNCVAPGWTETER 190 (249)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCc
Confidence 98887653 368999999999999984
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.8e-15 Score=113.58 Aligned_cols=141 Identities=15% Similarity=0.131 Sum_probs=99.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEec-CCCCccCCCCCCCchhhhhc-cCceEEEeecCCCH----HHHHhhhhcc---
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDY----DFVKSSLSAK--- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~----~~l~~~~~~~--- 71 (197)
|||+|+||.+++++|+++|++|++++| +++...... ..+... ..++.++.+|+.|. +++.++++..
T Consensus 17 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 91 (276)
T 1mxh_A 17 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLV-----AELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 91 (276)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-----HHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHh
Confidence 799999999999999999999999999 543321100 111111 34688999999999 8888877643
Q ss_pred --CccEEEeccCCCcc--------------------c---------------hHHHHHhCC-CC------CcEEEEecce
Q 029198 72 --GFDVVYDINGREAD--------------------E---------------VEPILDALP-NL------EQFIYCSSAG 107 (197)
Q Consensus 72 --~~d~vi~~a~~~~~--------------------~---------------~~~ll~~~~-~~------~~~v~~Ss~~ 107 (197)
++|+|||+||.... . ++.++..++ +. .+||++||..
T Consensus 92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~ 171 (276)
T 1mxh_A 92 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 171 (276)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred cCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchh
Confidence 79999999986321 1 122333333 33 7999999987
Q ss_pred ecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 108 vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+... .+...| .+|...+.+.+ ..++++++++||+++++
T Consensus 172 ~~~~~-----------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~ 218 (276)
T 1mxh_A 172 TDLPL-----------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 218 (276)
T ss_dssp GGSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred hcCCC-----------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence 65321 123346 89999887653 35899999999999998
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-15 Score=111.44 Aligned_cols=131 Identities=15% Similarity=0.128 Sum_probs=96.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-------cCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-------~~~ 73 (197)
|||+|++|.+++++|+++|++|++++|+++... ....++.+|+.|++++.++++. -++
T Consensus 9 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i 73 (236)
T 1ooe_A 9 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV 73 (236)
T ss_dssp ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 799999999999999999999999999876521 2356778999999988877753 289
Q ss_pred cEEEeccCCCc-----cc--------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 74 DVVYDINGREA-----DE--------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 74 d~vi~~a~~~~-----~~--------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|+|||+||... .. ++.++..++...+||++||...+.. ..+...
T Consensus 74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~ 142 (236)
T 1ooe_A 74 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-----------TPSMIG 142 (236)
T ss_dssp EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHH
T ss_pred CEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC-----------CCCcHH
Confidence 99999998532 10 1222233332358999999776521 112334
Q ss_pred c-hhhhhHHHHHh---------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~---------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..++++++++||++.++
T Consensus 143 Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~ 181 (236)
T 1ooe_A 143 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP 181 (236)
T ss_dssp HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCc
Confidence 6 89999887653 34699999999999876
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.6e-15 Score=112.54 Aligned_cols=144 Identities=17% Similarity=0.200 Sum_probs=102.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCC--CchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|.||.+++++|+++|++|++++|+.++........ ....+.....++.++.+|+.|++++.++++.. ++
T Consensus 15 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 94 (285)
T 3sc4_A 15 SGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGI 94 (285)
T ss_dssp ESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999977533211100 01122233467999999999999998887643 89
Q ss_pred cEEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|++||+||..... ++.++..++ +..+||++||...+... ..+..
T Consensus 95 d~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~~ 164 (285)
T 3sc4_A 95 DICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK----------WLRPT 164 (285)
T ss_dssp SEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG----------GSCSH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC----------CCCCc
Confidence 9999999974211 233444555 45799999996653211 01223
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEcccee
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYI 154 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i 154 (197)
.| .+|...+.+.+ ..|++++.++||++
T Consensus 165 ~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~ 199 (285)
T 3sc4_A 165 PYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTT 199 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSC
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCc
Confidence 46 89999887653 36899999999953
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=7.7e-16 Score=115.18 Aligned_cols=153 Identities=16% Similarity=0.113 Sum_probs=104.3
Q ss_pred CCcccchHHHHHHHHHH-CCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|+||.+++++|++ .|++|++++|+.+...... ..+.....++.++.+|+.|.+++.++++.. ++|
T Consensus 10 TGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 84 (276)
T 1wma_A 10 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-----QQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD 84 (276)
T ss_dssp SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred eCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHH-----HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 79999999999999999 9999999999755422110 111112346889999999999998887643 799
Q ss_pred EEEeccCCCcc--------------------chHHHHHhCC----CCCcEEEEecceeccc-CC----------CCCCCC
Q 029198 75 VVYDINGREAD--------------------EVEPILDALP----NLEQFIYCSSAGVYLK-SD----------LLPHCE 119 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~~~~ll~~~~----~~~~~v~~Ss~~vyg~-~~----------~~~~~e 119 (197)
+|||+||.... ++.++++++. ...+||++||...+.. .. ...++|
T Consensus 85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e 164 (276)
T 1wma_A 85 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE 164 (276)
T ss_dssp EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred EEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccch
Confidence 99999986421 1233444443 2349999999776532 00 001111
Q ss_pred CC-------------------CCCCCCcc-hhhhhHHHHHh-------h----cCCcEEEEccceeeCCC
Q 029198 120 TD-------------------TVDPKSRH-KGKLNTESVLE-------S----KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 120 ~~-------------------~~~~~~~~-~~k~~~e~~~~-------~----~~~~~~i~r~~~i~g~~ 158 (197)
++ ...|...| .+|...+.+.+ . .++++++++||++.++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~ 234 (276)
T 1wma_A 165 EELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234 (276)
T ss_dssp HHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred hhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCc
Confidence 11 11234567 99988887652 2 48999999999999875
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-14 Score=109.24 Aligned_cols=152 Identities=14% Similarity=0.147 Sum_probs=104.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCc-------hhhhhccCceEEEeecCCCHHHHHhhhhcc--
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-- 71 (197)
|||+|+||.+++++|+++|++|++++|+............. ..+.....++.++.+|+.|++++.++++..
T Consensus 19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 98 (278)
T 3sx2_A 19 TGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLD 98 (278)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 79999999999999999999999999985422111110000 111223467899999999999998887643
Q ss_pred ---CccEEEeccCCCccc--------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 72 ---GFDVVYDINGREADE--------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 72 ---~~d~vi~~a~~~~~~--------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
++|++||+||..... ++.++..++ + ..+||++||...+..... +..+
T Consensus 99 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------~~~~ 171 (278)
T 3sx2_A 99 ELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS-------ADPG 171 (278)
T ss_dssp HHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC-------SSHH
T ss_pred HcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc-------CCCC
Confidence 799999999975221 222333333 2 468999999765422110 0111
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~~ 159 (197)
...| .+|...+.+.+ ..+++++.++||++.++..
T Consensus 172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~ 213 (278)
T 3sx2_A 172 SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMI 213 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTT
T ss_pred chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccc
Confidence 2346 89999887653 3589999999999999854
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.60 E-value=2e-15 Score=112.79 Aligned_cols=142 Identities=13% Similarity=0.130 Sum_probs=100.5
Q ss_pred CCccc-chHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTR-FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG-~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+| .+|.+++++|+++|++|++++|+.+...... .++.+ ...++.++.+|+.|+++++++++.. ++
T Consensus 28 TGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 102 (266)
T 3o38_A 28 TAAAGTGIGSTTARRALLEGADVVISDYHERRLGETR-----DQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL 102 (266)
T ss_dssp SSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred ECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHH-----HHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCC
Confidence 79998 5999999999999999999999865532111 11111 1257999999999999998887643 79
Q ss_pred cEEEeccCCCccc------------------------hHHHHHhCC---CCCcEEEEecceecccCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 74 d~vi~~a~~~~~~------------------------~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 126 (197)
|+|||+||..... ++.++..++ +..+||++||...+... .+.
T Consensus 103 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~ 171 (266)
T 3o38_A 103 DVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ-----------HSQ 171 (266)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC-----------TTC
T ss_pred cEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC-----------CCC
Confidence 9999999964211 122333333 34589999997654211 123
Q ss_pred Ccc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
..| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 172 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 211 (266)
T 3o38_A 172 SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKF 211 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchh
Confidence 457 89999888753 368999999999998874
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-15 Score=114.33 Aligned_cols=141 Identities=17% Similarity=0.196 Sum_probs=102.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|+||.+++++|+++|++|++++|+.+...... .++.+ ...++.++.+|+.|+++++++++.. ++|
T Consensus 26 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 100 (266)
T 4egf_A 26 TGATKGIGADIARAFAAAGARLVLSGRDVSELDAAR-----RALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLD 100 (266)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCS
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999765432111 11111 2457899999999999888877643 799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
++||+||..... ++.++..++ + ..+||++||...+... .+..
T Consensus 101 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~ 169 (266)
T 4egf_A 101 VLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL-----------PDHY 169 (266)
T ss_dssp EEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------TTCH
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC-----------CCCh
Confidence 999999874211 122333333 2 4699999997765321 1233
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.| .+|...+.+.+ ..+++++.++||++.++
T Consensus 170 ~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 207 (266)
T 4egf_A 170 AYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTE 207 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCc
Confidence 46 89999887653 36899999999999886
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.2e-15 Score=113.89 Aligned_cols=138 Identities=19% Similarity=0.208 Sum_probs=99.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++...... .+...++.++.+|+.|++++.++++.. ++|+
T Consensus 12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 83 (263)
T 2a4k_A 12 TGAASGIGRAALDLFAREGASLVAVDREERLLAEAV--------AALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 83 (263)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 799999999999999999999999999865422110 111246889999999999998887642 6899
Q ss_pred EEeccCCCccc--------------------hHHH----HHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREADE--------------------VEPI----LDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~~--------------------~~~l----l~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
|||+||..... +..+ +..++...+||++||...++.. +...| .
T Consensus 84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~Y~a 151 (263)
T 2a4k_A 84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF------------GLAHYAA 151 (263)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH------------HHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCC------------CcHHHHH
Confidence 99999864211 1122 2333224699999997765211 12346 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+|...+.+.+ ..++++++++||++.++.
T Consensus 152 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 186 (263)
T 2a4k_A 152 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM 186 (263)
T ss_dssp CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCch
Confidence 8888777643 358999999999999874
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.6e-14 Score=105.88 Aligned_cols=136 Identities=16% Similarity=0.157 Sum_probs=103.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||++.||.++++.|+++|++|++.+|+++...... ..++..+.+|++|++++++++++. ++|++||+
T Consensus 17 TGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNN 85 (242)
T 4b79_A 17 TGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-----------HPRIRREELDITDSQRLQRLFEALPRLDVLVNN 85 (242)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-----------CTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-----------cCCeEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 799999999999999999999999999877643322 257889999999999999988754 69999999
Q ss_pred cCCCccc----------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhH
Q 029198 80 NGREADE----------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT 135 (197)
Q Consensus 80 a~~~~~~----------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~ 135 (197)
||..... ++.++..++ +-.+||++||....... .....| .+|...
T Consensus 86 AGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~-----------~~~~~Y~asKaav 154 (242)
T 4b79_A 86 AGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGS-----------ADRPAYSASKGAI 154 (242)
T ss_dssp CCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCC-----------SSCHHHHHHHHHH
T ss_pred CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCC-----------CCCHHHHHHHHHH
Confidence 9975221 333445554 44799999996643111 012346 899998
Q ss_pred HHHHh-------hcCCcEEEEccceeeCCC
Q 029198 136 ESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 136 e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
..+.+ ..|+++..+.||++-.|.
T Consensus 155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m 184 (242)
T 4b79_A 155 VQLTRSLACEYAAERIRVNAIAPGWIDTPL 184 (242)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCC-
T ss_pred HHHHHHHHHHhhhcCeEEEEEEeCCCCChh
Confidence 87643 478999999999998874
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.60 E-value=1e-14 Score=111.68 Aligned_cols=146 Identities=14% Similarity=0.154 Sum_probs=102.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCch-------hhhhccCceEEEeecCCCHHHHHhhhhcc--
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQ-------EFAEFSSKILHLKGDRKDYDFVKSSLSAK-- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-- 71 (197)
|||+|+||.+++++|+++|++|++++|+.............. .+.....++.++.+|+.|++++.++++..
T Consensus 52 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 131 (317)
T 3oec_A 52 TGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALA 131 (317)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred eCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 799999999999999999999999998754321111110001 11223457899999999999998887643
Q ss_pred ---CccEEEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCC
Q 029198 72 ---GFDVVYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETD 121 (197)
Q Consensus 72 ---~~d~vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~ 121 (197)
++|++||+||..... ++.++..++ + ..+||++||...+...
T Consensus 132 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~--------- 202 (317)
T 3oec_A 132 EFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA--------- 202 (317)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC---------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC---------
Confidence 799999999974211 222334443 2 4679999997764211
Q ss_pred CCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.....| .+|...+.+.+ ..|++++.++||++.++
T Consensus 203 --~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 244 (317)
T 3oec_A 203 --PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTE 244 (317)
T ss_dssp --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCc
Confidence 123346 89999887653 35899999999999886
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.6e-15 Score=115.24 Aligned_cols=140 Identities=11% Similarity=0.151 Sum_probs=98.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-----ccCceEEEeecCCCHHHHHhhhhcc----
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-----FSSKILHLKGDRKDYDFVKSSLSAK---- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~l~~~~~~~---- 71 (197)
|||+|++|.+++++|+++|++|++++|+.+...... .++.. ...++.++.+|+.|++++.++++..
T Consensus 24 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 98 (303)
T 1yxm_A 24 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAA-----DELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF 98 (303)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence 799999999999999999999999999865421110 01111 1357899999999999999888642
Q ss_pred -CccEEEeccCCCcc--------------------chHHHHHhC-----C-CCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 72 -GFDVVYDINGREAD--------------------EVEPILDAL-----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 72 -~~d~vi~~a~~~~~--------------------~~~~ll~~~-----~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
++|+|||+||.... ++.++++++ + +..+||++||...++. .
T Consensus 99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------~ 166 (303)
T 1yxm_A 99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF------------P 166 (303)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC------------T
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCC------------C
Confidence 69999999985311 122333332 2 3578999999762211 1
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
....| .+|...+.+.+ ..+++++++|||+++++
T Consensus 167 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 207 (303)
T 1yxm_A 167 LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQ 207 (303)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCT
T ss_pred cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccc
Confidence 12346 78888776543 35899999999999998
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.5e-15 Score=113.67 Aligned_cols=143 Identities=20% Similarity=0.217 Sum_probs=99.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++..++.......+ ...+.....++.++.+|+.|+++++++++.. ++|+
T Consensus 33 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~ 108 (267)
T 3u5t_A 33 TGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEV----AGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDV 108 (267)
T ss_dssp ESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999866544322111 0112223457899999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
+||+||..... ++.++..++...+||++||...+.... ....| .
T Consensus 109 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y~a 177 (267)
T 3u5t_A 109 LVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP-----------SYGIYAA 177 (267)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT-----------TCHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC-----------CchHHHH
Confidence 99999874211 122233333335899999976543211 12346 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+|...+.+.+ ..++++..++||++..+.
T Consensus 178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 212 (267)
T 3u5t_A 178 AKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDL 212 (267)
T ss_dssp HHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---
T ss_pred HHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcc
Confidence 9999988753 358999999999998764
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=8.7e-16 Score=115.45 Aligned_cols=141 Identities=13% Similarity=0.164 Sum_probs=102.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhh-hccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|+||.+++++|+++|++|++++|+.+...... .++. ....++.++.+|+.|+++++++++.. ++|
T Consensus 33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 107 (277)
T 4fc7_A 33 TGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAA-----RKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRID 107 (277)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999865432111 1111 12357899999999999998887643 799
Q ss_pred EEEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
++||+||.... + ++.++..+. +..+||++||...+.... ....
T Consensus 108 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~ 176 (277)
T 4fc7_A 108 ILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQA-----------LQVH 176 (277)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCT-----------TCHH
T ss_pred EEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC-----------CcHH
Confidence 99999985321 1 222333343 457999999976543211 1234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..+++++.++||++.++
T Consensus 177 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 213 (277)
T 4fc7_A 177 AGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGT 213 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSS
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecc
Confidence 6 88999887653 35899999999999986
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=4.5e-15 Score=110.81 Aligned_cols=141 Identities=14% Similarity=0.100 Sum_probs=99.3
Q ss_pred CCcc--cchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGat--G~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+ |+||.+++++|+++|++|++++|++ ...... .++....+...++.+|+.|++++.++++.. ++
T Consensus 15 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 88 (265)
T 1qsg_A 15 TGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRV-----EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF 88 (265)
T ss_dssp CCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred ECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHH-----HHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 7999 9999999999999999999999986 211110 111111134578999999999998887642 79
Q ss_pred cEEEeccCCCcc-----------c--------------hHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD-----------E--------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 74 d~vi~~a~~~~~-----------~--------------~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
|+|||+||.... . +..+++++. ...+||++||...+... .
T Consensus 89 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 157 (265)
T 1qsg_A 89 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI-----------P 157 (265)
T ss_dssp EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----------T
T ss_pred CEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC-----------C
Confidence 999999986431 1 122333333 22589999997664221 1
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+...| .+|...+.+.+ ..++++++++||+++++.
T Consensus 158 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (265)
T 1qsg_A 158 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 199 (265)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccch
Confidence 23356 89999988753 248999999999999985
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.8e-15 Score=113.23 Aligned_cols=143 Identities=13% Similarity=0.174 Sum_probs=101.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++++........ ...+.....++.++.+|+.|+++++++++.. ++|+
T Consensus 31 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~ 106 (269)
T 3gk3_A 31 TGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTW----LMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDV 106 (269)
T ss_dssp TTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHH----HHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999996543321100 0111222357899999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
|||+||..... ++.++..++ +..+||++||...+... .+...|
T Consensus 107 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 175 (269)
T 3gk3_A 107 LINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA-----------FGQANY 175 (269)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTBHHH
T ss_pred EEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC-----------CCcchH
Confidence 99999874211 222333343 55799999997654321 123356
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||++..+.
T Consensus 176 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 212 (269)
T 3gk3_A 176 ASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAM 212 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchh
Confidence 89998887653 358999999999998864
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=4.7e-15 Score=110.82 Aligned_cols=143 Identities=15% Similarity=0.122 Sum_probs=100.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|+++.+......... ...+.....++.++.+|+.|++++.++++.. ++|+
T Consensus 32 TGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 107 (267)
T 4iiu_A 32 TGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQET----LNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYG 107 (267)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 899999999999999999999988765543211100 0122223467899999999999998887643 7999
Q ss_pred EEeccCCCcc--------------------chHHHHHhC------C-CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD--------------------EVEPILDAL------P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~~------~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|||+||.... ++.++++++ + +..+||++||...+... .+...
T Consensus 108 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 176 (267)
T 4iiu_A 108 VVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN-----------RGQVN 176 (267)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC-----------TTCHH
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC-----------CCCch
Confidence 9999987421 122233332 2 56799999997654221 12234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 177 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 214 (267)
T 4iiu_A 177 YSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGM 214 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCc
Confidence 6 88998776542 358999999999999885
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.5e-15 Score=112.35 Aligned_cols=138 Identities=14% Similarity=0.108 Sum_probs=102.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+++..... ..+...++.++.+|+.|++++.++++.. ++|+
T Consensus 12 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 83 (247)
T 3rwb_A 12 TGAAQGIGKAIAARLAADGATVIVSDINAEGAKAA--------AASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI 83 (247)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH--------HHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 79999999999999999999999999986543211 1122457899999999999998887643 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||..... ++.++..++ + ..+||++||...+.... ....
T Consensus 84 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~ 152 (247)
T 3rwb_A 84 LVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP-----------NMAA 152 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT-----------TCHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC-----------Cchh
Confidence 99999974211 223334454 3 57999999977653211 1234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..+++++.++||++.++
T Consensus 153 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 189 (247)
T 3rwb_A 153 YVAAKGGVIGFTRALATELGKYNITANAVTPGLIESD 189 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence 6 89988887653 36899999999999875
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.3e-15 Score=114.70 Aligned_cols=143 Identities=19% Similarity=0.292 Sum_probs=96.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+........ ..++.....++.++.+|+.|++++.++++.. ++|+
T Consensus 35 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 110 (280)
T 4da9_A 35 TGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPV----IAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDC 110 (280)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHH----HHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCE
T ss_pred ecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHH----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999997543311110 0112223457899999999999888877643 7999
Q ss_pred EEeccCCC--cc--------------------c----hHHHHHhCC--C---CCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 76 VYDINGRE--AD--------------------E----VEPILDALP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 76 vi~~a~~~--~~--------------------~----~~~ll~~~~--~---~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
+||+||.. .. + ++.++..++ + ..+||++||...+... .
T Consensus 111 lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----------~ 179 (280)
T 4da9_A 111 LVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS-----------P 179 (280)
T ss_dssp EEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------------
T ss_pred EEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC-----------C
Confidence 99999872 11 0 223344443 2 4689999997654211 1
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+...| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 180 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 221 (280)
T 4da9_A 180 ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDM 221 (280)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCc
Confidence 12346 89999887653 368999999999998874
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=2.8e-15 Score=111.96 Aligned_cols=141 Identities=16% Similarity=0.167 Sum_probs=101.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-c-cCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|.||.+++++|+++|++|++++|++++..... .++.. . ..++.++.+|+.|++++.++++.. ++
T Consensus 14 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 88 (265)
T 3lf2_A 14 TGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAE-----SALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCA 88 (265)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999865432111 11111 1 234899999999999998887643 79
Q ss_pred cEEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|++||+||..... ++.++..++ +..+||++||...+... ....
T Consensus 89 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~ 157 (265)
T 3lf2_A 89 SILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE-----------PHMV 157 (265)
T ss_dssp SEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC-----------TTBH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC-----------CCch
Confidence 9999999974221 233444444 45789999997664211 1233
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.| .+|...+.+.+ ..|+++..++||++.++
T Consensus 158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 195 (265)
T 3lf2_A 158 ATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESG 195 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCc
Confidence 46 89999887653 35899999999999876
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.59 E-value=7.1e-15 Score=108.94 Aligned_cols=129 Identities=13% Similarity=0.132 Sum_probs=95.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|++++.. ...+.+|+.|.+++.++++.. ++|+
T Consensus 28 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~ 90 (251)
T 3orf_A 28 LGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-----------------DHSFTIKDSGEEEIKSVIEKINSKSIKVDT 90 (251)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-----------------SEEEECSCSSHHHHHHHHHHHHTTTCCEEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------------ccceEEEeCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999876521 235678899999998887643 6899
Q ss_pred EEeccCCCcc---------------------chHHHHHh----CCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREAD---------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~---------------------~~~~ll~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
|||+||.... ++..++++ ++...+||++||...+.. ..+...|
T Consensus 91 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~ 159 (251)
T 3orf_A 91 FVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR-----------TSGMIAYG 159 (251)
T ss_dssp EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHHHH
T ss_pred EEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC-----------CCCCchhH
Confidence 9999985311 11223333 223358999999776521 1123346
Q ss_pred hhhhhHHHHHh---------hcCCcEEEEccceeeCC
Q 029198 130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 ~~k~~~e~~~~---------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..+++++.++||++.++
T Consensus 160 ~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~ 196 (251)
T 3orf_A 160 ATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP 196 (251)
T ss_dssp HHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc
Confidence 89999888753 35799999999999875
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=4.3e-15 Score=110.61 Aligned_cols=141 Identities=19% Similarity=0.130 Sum_probs=100.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc------cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~------~~~d 74 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+.....++.++.+|+.|++++.++++. -++|
T Consensus 11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id 85 (260)
T 2qq5_A 11 TGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVA-----QEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLD 85 (260)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCC
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCce
Confidence 799999999999999999999999999765422110 11112235688999999999988887653 2689
Q ss_pred EEEeccCCCc----------------c-----------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCC
Q 029198 75 VVYDINGREA----------------D-----------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD 121 (197)
Q Consensus 75 ~vi~~a~~~~----------------~-----------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~ 121 (197)
++||+||... . + ++.++..++ +..+||++||...+..
T Consensus 86 ~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------- 155 (260)
T 2qq5_A 86 VLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY---------- 155 (260)
T ss_dssp EEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC----------
T ss_pred EEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC----------
Confidence 9999994210 0 0 123344444 5679999999776521
Q ss_pred CCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+...| .+|...+.+.+ ..++++++++||++..+.
T Consensus 156 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 156 --MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp --CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 123357 89999988753 368999999999998874
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=5.8e-15 Score=110.01 Aligned_cols=141 Identities=14% Similarity=0.104 Sum_probs=100.3
Q ss_pred CCcc--cchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGat--G~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+ |+||.+++++|+++|++|++++|+++. .... .++.+..+.+.++.+|+.|+++++++++.. ++
T Consensus 14 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (261)
T 2wyu_A 14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERL-RPEA-----EKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL 87 (261)
T ss_dssp ESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGG-HHHH-----HHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred ECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHH-----HHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 7998 999999999999999999999997631 1000 111111134788999999999998887643 79
Q ss_pred cEEEeccCCCcc------------------------chHHHHHhCC-C---CCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD------------------------EVEPILDALP-N---LEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~------------------------~~~~ll~~~~-~---~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|+|||+||.... ++..+++++. . ..+||++||...+... .+
T Consensus 88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 156 (261)
T 2wyu_A 88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV-----------PK 156 (261)
T ss_dssp EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC-----------TT
T ss_pred CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC-----------CC
Confidence 999999986431 1223444444 1 2589999997654211 12
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ ..++++++++||+++++.
T Consensus 157 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 197 (261)
T 2wyu_A 157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTG
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCch
Confidence 2346 89999887653 358999999999999974
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.59 E-value=8.9e-15 Score=106.97 Aligned_cols=139 Identities=14% Similarity=0.089 Sum_probs=99.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc--CccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~--~~d~vi~ 78 (197)
|||+|++|.+++++|+++|++|++++|+++...... .+...++.++.+|+.|.+++.++++.. .+|+|||
T Consensus 7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 7 TGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVT--------NCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH--------HTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence 799999999999999999999999999865532111 112357889999999999999998742 3599999
Q ss_pred ccCCCccc------------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhh
Q 029198 79 INGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK 132 (197)
Q Consensus 79 ~a~~~~~~------------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k 132 (197)
+||..... ++.++..++ ...++|++||...+... .+...| .+|
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y~asK 147 (230)
T 3guy_A 79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPK-----------AQESTYCAVK 147 (230)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCC-----------TTCHHHHHHH
T ss_pred eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCC-----------CCCchhHHHH
Confidence 99864211 223444444 33499999997765321 123356 899
Q ss_pred hhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 133 LNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 133 ~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...+.+.+ ..++++..++||.+..+.
T Consensus 148 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 180 (230)
T 3guy_A 148 WAVKGLIESVRLELKGKPMKIIAVYPGGMATEF 180 (230)
T ss_dssp HHHHHHHHHHHHHTTTSSCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHhcCeEEEEEECCcccChH
Confidence 99888653 358999999999998764
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.2e-15 Score=112.70 Aligned_cols=141 Identities=16% Similarity=0.148 Sum_probs=103.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCHHHHHhhhhcc-CccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-GFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi 77 (197)
|||+|+||.+++++|+++|++|++++|+++...... .++... ...+.++.+|+.+++++.+++++. ++|++|
T Consensus 16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv 90 (267)
T 3t4x_A 16 TGSTAGIGKAIATSLVAEGANVLINGRREENVNETI-----KEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILI 90 (267)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence 899999999999999999999999999865432111 111111 245788999999999999888754 799999
Q ss_pred eccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 78 DINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 78 ~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
|+||..... ++.++..++ +..+||++||...+... .+...| .
T Consensus 91 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~a 159 (267)
T 3t4x_A 91 NNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS-----------QEMAHYSA 159 (267)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC-----------TTCHHHHH
T ss_pred ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC-----------CcchHHHH
Confidence 999974211 334455554 55799999997765211 123457 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
+|...+.+.+ ..++++..++||++.++
T Consensus 160 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (267)
T 3t4x_A 160 TKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTE 193 (267)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCH
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCc
Confidence 9999888753 25799999999999875
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.6e-15 Score=113.80 Aligned_cols=142 Identities=24% Similarity=0.251 Sum_probs=100.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCc-cCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|+||.+++++|+++|++|++.+|+.+.. ...+ ...+.....++.++.+|+.|+++++++++.. ++|
T Consensus 55 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 130 (294)
T 3r3s_A 55 TGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQV----KALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLD 130 (294)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH----HHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHH----HHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 79999999999999999999999999873321 1000 0111222457899999999999988877632 799
Q ss_pred EEEeccCCCcc---------------------chHHHHHh----CCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 75 VVYDINGREAD---------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 75 ~vi~~a~~~~~---------------------~~~~ll~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
++||+||.... ++..++++ +++..+||++||...+.... ....|
T Consensus 131 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~-----------~~~~Y 199 (294)
T 3r3s_A 131 ILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSP-----------HLLDY 199 (294)
T ss_dssp EEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT-----------TCHHH
T ss_pred EEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC-----------CchHH
Confidence 99999986321 12223333 33335999999987764211 22346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..|++++.++||+++++
T Consensus 200 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~ 235 (294)
T 3r3s_A 200 AATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTA 235 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccc
Confidence 89999887653 35899999999999885
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=3.9e-15 Score=109.17 Aligned_cols=142 Identities=18% Similarity=0.153 Sum_probs=100.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhh-hccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|++|.+++++|+++|++|++++|+.++..... .++. ....++.++.+|+.|++++.++++.. ++|
T Consensus 8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 82 (235)
T 3l77_A 8 TGASRGIGEAIARALARDGYALALGARSVDRLEKIA-----HELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVD 82 (235)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCS
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 799999999999999999999999999865432111 1111 22457899999999999999888643 799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
++||+||..... ++.++..++ +..++|++||...+... .....|
T Consensus 83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~~~Y 151 (235)
T 3l77_A 83 VVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI-----------PYGGGY 151 (235)
T ss_dssp EEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC-----------TTCHHH
T ss_pred EEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC-----------CCcchH
Confidence 999999874211 222333344 34577777775543111 012346
Q ss_pred -hhhhhHHHHHh-----hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-----SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-----~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..+++++.++||++..+.
T Consensus 152 ~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~ 186 (235)
T 3l77_A 152 VSTKWAARALVRTFQIENPDVRFFELRPGAVDTYF 186 (235)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSST
T ss_pred HHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccc
Confidence 89999888764 358999999999998764
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=7.1e-15 Score=108.26 Aligned_cols=131 Identities=12% Similarity=0.047 Sum_probs=96.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-------cCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-------~~~ 73 (197)
|||+|+||.+++++|+++|++|++++|+++... ....++.+|+.|++++.++++. -++
T Consensus 13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~i 77 (241)
T 1dhr_A 13 YGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV 77 (241)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred ECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 799999999999999999999999999876521 2356788999999988887763 279
Q ss_pred cEEEeccCCCc-----cc----------------h----HHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 74 DVVYDINGREA-----DE----------------V----EPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 74 d~vi~~a~~~~-----~~----------------~----~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|+|||+||... .. . +.++..++...+||++||...+... .+...
T Consensus 78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 146 (241)
T 1dhr_A 78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT-----------PGMIG 146 (241)
T ss_dssp EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----------TTBHH
T ss_pred CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC-----------CCchH
Confidence 99999998632 10 1 1122223223589999997765321 12334
Q ss_pred c-hhhhhHHHHHh---------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~---------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..+++++.++||++-.+
T Consensus 147 Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~ 185 (241)
T 1dhr_A 147 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP 185 (241)
T ss_dssp HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc
Confidence 6 89999887653 35699999999999765
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.58 E-value=1e-14 Score=109.45 Aligned_cols=145 Identities=16% Similarity=0.157 Sum_probs=101.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCC--chhhhhccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES--DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|.||.+++++|+++|++|++++|+.++......... ...+.....++.++.+|+.|++++.++++.. ++
T Consensus 12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 91 (274)
T 3e03_A 12 TGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGGI 91 (274)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 7999999999999999999999999998765332211100 1112223467899999999999998887642 79
Q ss_pred cEEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|++||+||..... ++.++..++ +..+||++||...+.... ..+..
T Consensus 92 D~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------~~~~~ 162 (274)
T 3e03_A 92 DILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW---------WGAHT 162 (274)
T ss_dssp CEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH---------HHHCH
T ss_pred CEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC---------CCCCc
Confidence 9999999964211 233455555 557999999976542210 01123
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEcccee
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYI 154 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i 154 (197)
.| .+|...+.+.+ ..+++++.++||++
T Consensus 163 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~ 197 (274)
T 3e03_A 163 GYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTV 197 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBC
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcc
Confidence 46 89999887653 46899999999953
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.58 E-value=9.1e-15 Score=112.38 Aligned_cols=142 Identities=15% Similarity=0.089 Sum_probs=101.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh------ccCceEEEeecCCCHHHHHhhhhcc---
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE------FSSKILHLKGDRKDYDFVKSSLSAK--- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d~~~~~~l~~~~~~~--- 71 (197)
|||+|+||.+++++|+++|++|+++.|+........ ..+.. ...++.++.+|+.|.+++.++++..
T Consensus 8 TGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g 82 (327)
T 1jtv_A 8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQG-----RLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG 82 (327)
T ss_dssp SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTH-----HHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred ECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHH-----HHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcC
Confidence 899999999999999999999999988755432110 11111 1246899999999999999988742
Q ss_pred CccEEEeccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 72 GFDVVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 72 ~~d~vi~~a~~~~~--------------------~~----~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
++|+|||+||.... ++ +.++..++ +..+||++||...+... ..
T Consensus 83 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~-----------~~ 151 (327)
T 1jtv_A 83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL-----------PF 151 (327)
T ss_dssp CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----------TT
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC-----------CC
Confidence 59999999986421 12 22333344 66899999997664211 11
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ ..++++++++||++..+.
T Consensus 152 ~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 2347 89999987653 368999999999998874
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.58 E-value=3.9e-15 Score=112.15 Aligned_cols=142 Identities=13% Similarity=0.095 Sum_probs=100.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc-cCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|+||.+++++|+++|++|++++|+++...... .++... ...+.++.+|+.|++++.++++.. ++|
T Consensus 39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 113 (281)
T 4dry_A 39 TGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAA-----GEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLD 113 (281)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 899999999999999999999999999865432111 111111 123589999999999998887643 799
Q ss_pred EEEeccCCCccc-------------------------hHHHHHhCC--C--CCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREADE-------------------------VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 75 ~vi~~a~~~~~~-------------------------~~~ll~~~~--~--~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
++||+||..... ++.++..++ + ..+||++||...+.. ..+
T Consensus 114 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----------~~~ 182 (281)
T 4dry_A 114 LLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP-----------RPN 182 (281)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC-----------CTT
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC-----------CCC
Confidence 999999874210 233444444 2 469999999765421 112
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ ..++++..++||++..+.
T Consensus 183 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 223 (281)
T 4dry_A 183 SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDM 223 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC--
T ss_pred ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChh
Confidence 3346 89999887653 368999999999998763
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.57 E-value=7.2e-15 Score=111.84 Aligned_cols=153 Identities=14% Similarity=0.085 Sum_probs=102.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc-cCceEEEeecCCCH-HHHHhhhhc-----cCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDY-DFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~l~~~~~~-----~~~ 73 (197)
|||+|+||.+++++|+++|++|++++|+.++..... .++.+. ..++.++.+|+.|+ +++.++++. -++
T Consensus 18 TGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~i 92 (311)
T 3o26_A 18 TGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAV-----EKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKL 92 (311)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSC
T ss_pred ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCC
Confidence 899999999999999999999999999876532111 111111 24689999999998 777776653 279
Q ss_pred cEEEeccCCCcc--------------------------------------------------c----hHHHHHhCC--CC
Q 029198 74 DVVYDINGREAD--------------------------------------------------E----VEPILDALP--NL 97 (197)
Q Consensus 74 d~vi~~a~~~~~--------------------------------------------------~----~~~ll~~~~--~~ 97 (197)
|+|||+||.... + ++.++..++ +.
T Consensus 93 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~ 172 (311)
T 3o26_A 93 DILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDS 172 (311)
T ss_dssp CEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred CEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCC
Confidence 999999996411 0 333445555 55
Q ss_pred CcEEEEecceecccCC--------------------------------CCCCCCCCCCCCCCcc-hhhhhHHHHHhh---
Q 029198 98 EQFIYCSSAGVYLKSD--------------------------------LLPHCETDTVDPKSRH-KGKLNTESVLES--- 141 (197)
Q Consensus 98 ~~~v~~Ss~~vyg~~~--------------------------------~~~~~e~~~~~~~~~~-~~k~~~e~~~~~--- 141 (197)
.+||++||...+.... .........+.+...| .+|...+.+.+.
T Consensus 173 ~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~ 252 (311)
T 3o26_A 173 PRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLAN 252 (311)
T ss_dssp CEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHh
Confidence 7999999966432110 0000111111122347 999999887632
Q ss_pred --cCCcEEEEccceeeCCC
Q 029198 142 --KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 142 --~~~~~~i~r~~~i~g~~ 158 (197)
.+++++.++||++..+.
T Consensus 253 e~~~i~v~~v~PG~v~T~~ 271 (311)
T 3o26_A 253 KIPKFQVNCVCPGLVKTEM 271 (311)
T ss_dssp HCTTSEEEEECCCSBCSGG
T ss_pred hcCCceEEEecCCceecCC
Confidence 36999999999998864
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.8e-15 Score=111.05 Aligned_cols=141 Identities=16% Similarity=0.196 Sum_probs=98.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc--c-CceEEEeecCCCHHHHHhhhhcc-----C
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--S-SKILHLKGDRKDYDFVKSSLSAK-----G 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~d~~~~~~l~~~~~~~-----~ 72 (197)
|||+|+||.+++++|+++|++|++++|+++...... ..+... . .++.++.+|+.|.+++.++++.. +
T Consensus 13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 87 (250)
T 3nyw_A 13 TGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVH-----DEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGA 87 (250)
T ss_dssp ESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHH-----HHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 799999999999999999999999999865532111 111111 1 56889999999999988887642 7
Q ss_pred ccEEEeccCCCccc-----------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 73 FDVVYDINGREADE-----------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 73 ~d~vi~~a~~~~~~-----------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+|++||+||..... ++.++..++ +..+||++||...+.. ..+..
T Consensus 88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~ 156 (250)
T 3nyw_A 88 VDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG-----------FADGG 156 (250)
T ss_dssp EEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------CCTT
T ss_pred CCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC-----------CCCCc
Confidence 99999999974221 223344444 5679999999665321 11234
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.| .+|...+.+.+ ..+++++.++||++..+
T Consensus 157 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 194 (250)
T 3nyw_A 157 IYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD 194 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc
Confidence 57 89998887653 35899999999999764
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.9e-14 Score=109.13 Aligned_cols=141 Identities=13% Similarity=0.062 Sum_probs=101.0
Q ss_pred CCccc--chHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG--~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+| ++|.+++++|+++|++|++++|+++.... + ..+......+.++.+|+.|++++.++++.. ++
T Consensus 36 TGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~-~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 109 (296)
T 3k31_A 36 IGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKR-V-----DPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSL 109 (296)
T ss_dssp ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-H-----HHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred EeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHH-H-----HHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 79987 99999999999999999999998543111 0 111122245789999999999999888643 79
Q ss_pred cEEEeccCCCcc------------------------chHHHHHh----CCCCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~------------------------~~~~ll~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|++||+||.... ++..++++ ++...+||++||...+... ..
T Consensus 110 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~-----------~~ 178 (296)
T 3k31_A 110 DFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV-----------PH 178 (296)
T ss_dssp SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC-----------TT
T ss_pred CEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC-----------CC
Confidence 999999987521 01223333 2234589999997764211 12
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 179 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 219 (296)
T 3k31_A 179 YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLA 219 (296)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSS
T ss_pred chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCch
Confidence 3456 89999887653 358999999999999875
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=3.6e-14 Score=106.74 Aligned_cols=140 Identities=11% Similarity=0.056 Sum_probs=101.3
Q ss_pred CCcccc--hHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~--vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|+ ||.+++++|+++|++|++++|+... .. ..++.+...++.++.+|+.|.+++.++++.. ++
T Consensus 32 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~--~~-----~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 104 (280)
T 3nrc_A 32 TGLLSNKSIAYGIAKAMHREGAELAFTYVGQFK--DR-----VEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL 104 (280)
T ss_dssp CCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCH--HH-----HHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred ECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHH--HH-----HHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 799966 9999999999999999999998611 00 0122222356899999999999998887643 68
Q ss_pred cEEEeccCCCcc-----------c------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD-----------E------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV 123 (197)
Q Consensus 74 d~vi~~a~~~~~-----------~------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 123 (197)
|+|||+||.... . ++.++..++ ...+||++||...+...
T Consensus 105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 173 (280)
T 3nrc_A 105 DAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAM----------- 173 (280)
T ss_dssp CEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCC-----------
T ss_pred CEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCC-----------
Confidence 999999987421 0 122333344 45799999997764221
Q ss_pred CCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+...| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 174 ~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 216 (280)
T 3nrc_A 174 PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLA 216 (280)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSG
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchh
Confidence 123346 89999887653 368999999999999874
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.7e-14 Score=106.35 Aligned_cols=131 Identities=14% Similarity=0.150 Sum_probs=99.0
Q ss_pred CCcccchHHHHHHHHHH-CCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc---CccEE
Q 029198 1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~---~~d~v 76 (197)
|||+|+||.+++++|++ .|+.|++.+|+++.. ...+.++.+|+.|++++.++++.. ++|++
T Consensus 10 TGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~l 74 (244)
T 4e4y_A 10 TGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------------AENLKFIKADLTKQQDITNVLDIIKNVSFDGI 74 (244)
T ss_dssp ETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEE
T ss_pred eCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------------cccceEEecCcCCHHHHHHHHHHHHhCCCCEE
Confidence 79999999999999999 789999999876531 135789999999999998887532 79999
Q ss_pred EeccCCCcc--------------------chHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hh
Q 029198 77 YDINGREAD--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG 131 (197)
Q Consensus 77 i~~a~~~~~--------------------~~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~ 131 (197)
||+||.... ++..+++++. ...++|++||...+... .+...| .+
T Consensus 75 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~~~~Y~as 143 (244)
T 4e4y_A 75 FLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAK-----------PNSFAYTLS 143 (244)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCC-----------TTBHHHHHH
T ss_pred EECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCC-----------CCCchhHHH
Confidence 999997421 1233444443 22489999997765321 122346 89
Q ss_pred hhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 132 KLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 132 k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
|...+.+.+ ..+++++.++||++.++
T Consensus 144 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 176 (244)
T 4e4y_A 144 KGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTD 176 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCH
T ss_pred HHHHHHHHHHHHHHHHHcCeEEEEEecCccCch
Confidence 999988753 46899999999999886
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.57 E-value=5.5e-15 Score=110.01 Aligned_cols=139 Identities=18% Similarity=0.159 Sum_probs=96.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|++|.+++++|+++|++|++++|+++..... ..+....+.++.+|+.|.++++++++.. ++|+
T Consensus 15 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 86 (261)
T 3n74_A 15 TGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERV--------AGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI 86 (261)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--------HHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999999999999999999986553211 1122457899999999999998887643 7999
Q ss_pred EEeccCCCcc---------------------c----hHHHHHhCC--C----CCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD---------------------E----VEPILDALP--N----LEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 76 vi~~a~~~~~---------------------~----~~~ll~~~~--~----~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
|||+||.... + ++.++..++ + ..+||++||...+... .
T Consensus 87 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~ 155 (261)
T 3n74_A 87 LVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR-----------P 155 (261)
T ss_dssp EEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC-----------T
T ss_pred EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC-----------C
Confidence 9999986421 0 222333333 1 3469999997654211 1
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
....| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 197 (261)
T 3n74_A 156 NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPL 197 (261)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChh
Confidence 12346 89999888753 368999999999998874
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=4.7e-14 Score=106.42 Aligned_cols=147 Identities=17% Similarity=0.192 Sum_probs=102.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCC----CCCch-------hhhhccCceEEEeecCCCHHHHHhhhh
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP----GESDQ-------EFAEFSSKILHLKGDRKDYDFVKSSLS 69 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~-------~~~~~~~~~~~~~~d~~~~~~l~~~~~ 69 (197)
|||+|.||.+++++|+++|++|++++|+++....... ..... .+.....++.++.+|+.|++++.++++
T Consensus 17 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 96 (286)
T 3uve_A 17 TGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVD 96 (286)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHH
Confidence 7999999999999999999999999998543221111 00001 112224578999999999999988876
Q ss_pred cc-----CccEEEeccCCCccc-------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCC
Q 029198 70 AK-----GFDVVYDINGREADE-------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLP 116 (197)
Q Consensus 70 ~~-----~~d~vi~~a~~~~~~-------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~ 116 (197)
.. ++|++||+||..... ++.++..++ + ..+||++||...+...
T Consensus 97 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 172 (286)
T 3uve_A 97 SGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAY---- 172 (286)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----
T ss_pred HHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCC----
Confidence 42 799999999963211 222333443 2 4689999997765221
Q ss_pred CCCCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 117 HCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 117 ~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.....| .+|...+.+.+ ..+++++.++||++..+.
T Consensus 173 -------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 215 (286)
T 3uve_A 173 -------PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPM 215 (286)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTT
T ss_pred -------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCc
Confidence 112346 89998887653 368999999999999885
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.57 E-value=5.2e-15 Score=111.66 Aligned_cols=141 Identities=16% Similarity=0.141 Sum_probs=98.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhcc-CceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|+||.+++++|+++|++|++++|+++...... ..+.+.. .++.++.+|+.|.+++.++++.. ++|
T Consensus 34 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD 108 (286)
T 1xu9_A 34 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV-----SHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD 108 (286)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999865422110 1111111 36889999999999888877632 799
Q ss_pred EEEec-cCCCcc-------------------ch----HHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 75 VVYDI-NGREAD-------------------EV----EPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 75 ~vi~~-a~~~~~-------------------~~----~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+|||+ ++.... ++ +.++..++ +..+||++||...+... .+...|
T Consensus 109 ~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 177 (286)
T 1xu9_A 109 MLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY-----------PMVAAY 177 (286)
T ss_dssp EEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC-----------TTCHHH
T ss_pred EEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC-----------CCccHH
Confidence 99999 554311 11 22333333 34699999997764321 123346
Q ss_pred -hhhhhHHHHHh---------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE---------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~---------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..++++++++||++.++
T Consensus 178 ~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~ 215 (286)
T 1xu9_A 178 SASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 215 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCCh
Confidence 88998887642 34899999999999875
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.9e-14 Score=108.95 Aligned_cols=141 Identities=11% Similarity=0.058 Sum_probs=100.4
Q ss_pred CCcccc--hHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~--vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|+ ||.+++++|+++|++|++++|++.... .. .++.+...++.++.+|+.|+++++++++.. ++
T Consensus 37 TGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 110 (293)
T 3grk_A 37 LGVANNRSIAWGIAKAAREAGAELAFTYQGDALKK-RV-----EPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKL 110 (293)
T ss_dssp ECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHH-HH-----HHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred EcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHH-HH-----HHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 799988 999999999999999999999843211 00 111222346889999999999998887642 79
Q ss_pred cEEEeccCCCcc------------------------c----hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~------------------------~----~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|++||+||.... + ++.++..++...+||++||...+... ..
T Consensus 111 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~-----------~~ 179 (293)
T 3grk_A 111 DFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM-----------PN 179 (293)
T ss_dssp SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC-----------TT
T ss_pred CEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC-----------Cc
Confidence 999999997531 0 12233334444699999997765321 12
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 180 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 220 (293)
T 3grk_A 180 YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLA 220 (293)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchh
Confidence 3456 89999887653 368999999999999874
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.57 E-value=2.6e-14 Score=107.96 Aligned_cols=142 Identities=15% Similarity=0.104 Sum_probs=100.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCC-CCccCCCCCCCchhhh-hccCceEEEeecCCC----HHHHHhhhhcc---
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFA-EFSSKILHLKGDRKD----YDFVKSSLSAK--- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~----~~~l~~~~~~~--- 71 (197)
|||+|+||.+++++|+++|++|++++|++ +...... ..+. ....++.++.+|+.| ++++.++++..
T Consensus 29 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~ 103 (288)
T 2x9g_A 29 TGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLA-----DELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA 103 (288)
T ss_dssp TTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-----HHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence 89999999999999999999999999986 3321100 1111 123568899999999 88888877632
Q ss_pred --CccEEEeccCCCc----------c-----c-------------------hHHHHHhCC--C------CCcEEEEecce
Q 029198 72 --GFDVVYDINGREA----------D-----E-------------------VEPILDALP--N------LEQFIYCSSAG 107 (197)
Q Consensus 72 --~~d~vi~~a~~~~----------~-----~-------------------~~~ll~~~~--~------~~~~v~~Ss~~ 107 (197)
++|+|||+||... . . ++.++..++ + ..+||++||..
T Consensus 104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~ 183 (288)
T 2x9g_A 104 FGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAM 183 (288)
T ss_dssp HSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTT
T ss_pred cCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEeccc
Confidence 7999999998631 1 1 122344444 2 46999999976
Q ss_pred ecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 108 vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+.. ..+...| .+|...+.+.+ ..++++++++||+++++.
T Consensus 184 ~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 231 (288)
T 2x9g_A 184 VDQP-----------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV 231 (288)
T ss_dssp TTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred ccCC-----------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence 6531 1123346 89998887653 358999999999999985
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=9.5e-15 Score=109.63 Aligned_cols=141 Identities=12% Similarity=0.054 Sum_probs=99.7
Q ss_pred CCcc--cchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGat--G~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+ |+||.+++++|+++|++|++++|+++. ...+ .++....+.+.++.+|+.|++++.++++.. ++
T Consensus 12 TGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 85 (275)
T 2pd4_A 12 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESL-EKRV-----RPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL 85 (275)
T ss_dssp ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred ECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH-HHHH-----HHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 7998 999999999999999999999998641 1110 111111234788999999999998887643 79
Q ss_pred cEEEeccCCCcc------------------------chHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~------------------------~~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|+|||+||.... ++..+++++. ...+||++||...+... .+
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 154 (275)
T 2pd4_A 86 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM-----------AH 154 (275)
T ss_dssp EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----------TT
T ss_pred CEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC-----------CC
Confidence 999999986431 1222333332 23589999996654211 12
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 155 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 195 (275)
T 2pd4_A 155 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA 195 (275)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccch
Confidence 2346 89999887653 358999999999999874
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.9e-14 Score=107.53 Aligned_cols=141 Identities=16% Similarity=0.101 Sum_probs=98.4
Q ss_pred CCcc--cchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGat--G~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+ |+||.+++++|+++|++|++++|+..... .+ ..+....+.+.++.+|+.|++++.++++.. ++
T Consensus 20 TGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 93 (271)
T 3ek2_A 20 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKD-RI-----TEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSL 93 (271)
T ss_dssp CCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCE
T ss_pred eCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHH-HH-----HHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 7998 99999999999999999999999843211 10 112222346889999999999999888643 79
Q ss_pred cEEEeccCCCcc-----------c--------------hHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD-----------E--------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 74 d~vi~~a~~~~~-----------~--------------~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
|++||+||.... . ...+++++. ...+||++||...+... .
T Consensus 94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 162 (271)
T 3ek2_A 94 DGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI-----------P 162 (271)
T ss_dssp EEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----------T
T ss_pred CEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCC-----------C
Confidence 999999986421 1 222333332 24589999997765321 1
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+...| .+|...+.+.+ ..+++++.++||++..+.
T Consensus 163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 204 (271)
T 3ek2_A 163 NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLA 204 (271)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC----
T ss_pred CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchh
Confidence 23456 89999887653 358999999999999874
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.56 E-value=5.1e-14 Score=106.93 Aligned_cols=147 Identities=14% Similarity=0.225 Sum_probs=103.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCc-------hhhhhccCceEEEeecCCCHHHHHhhhhcc--
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-- 71 (197)
|||+|+||.+++++|+++|++|++++|++......+..... ..+.....++.++.+|+.|++++.++++..
T Consensus 34 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 113 (299)
T 3t7c_A 34 TGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVT 113 (299)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 79999999999999999999999999985432111111110 112223457899999999999998887642
Q ss_pred ---CccEEEeccCCCccc-------------------------hHHHHHhCC---CCCcEEEEecceecccCCCCCCCCC
Q 029198 72 ---GFDVVYDINGREADE-------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCET 120 (197)
Q Consensus 72 ---~~d~vi~~a~~~~~~-------------------------~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~ 120 (197)
++|++||+||..... ++.++..+. +..+||++||...+...
T Consensus 114 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-------- 185 (299)
T 3t7c_A 114 QLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA-------- 185 (299)
T ss_dssp HHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC--------
T ss_pred HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC--------
Confidence 799999999863211 222333333 24689999997765221
Q ss_pred CCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.....| .+|...+.+.+ ..|++++.++||++.++.
T Consensus 186 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 228 (299)
T 3t7c_A 186 ---ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPM 228 (299)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTT
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcc
Confidence 122346 89999887653 358999999999999885
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-14 Score=109.51 Aligned_cols=147 Identities=15% Similarity=0.104 Sum_probs=102.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCC-Cc-------hhhhhccCceEEEeecCCCHHHHHhhhhc--
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE-SD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSA-- 70 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-- 70 (197)
|||+|+||.+++++|+++|++|++++|+.+......... .. ..+.....++.++.+|+.|++++.++++.
T Consensus 17 TGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 96 (277)
T 3tsc_A 17 TGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGV 96 (277)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 799999999999999999999999999643211000000 00 11122245789999999999999888764
Q ss_pred ---cCccEEEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCC
Q 029198 71 ---KGFDVVYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCET 120 (197)
Q Consensus 71 ---~~~d~vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~ 120 (197)
-++|++||+||..... ++.++..++ + ..+||++||...+...
T Consensus 97 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 168 (277)
T 3tsc_A 97 AALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ-------- 168 (277)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC--------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC--------
Confidence 2799999999874221 222333343 2 4689999997765221
Q ss_pred CCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.....| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 169 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 211 (277)
T 3tsc_A 169 ---PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPM 211 (277)
T ss_dssp ---SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGG
T ss_pred ---CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCc
Confidence 112346 89999887753 358999999999998874
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=3.1e-14 Score=106.23 Aligned_cols=142 Identities=11% Similarity=0.051 Sum_probs=99.7
Q ss_pred CCcccc--hHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhcc-CceEEEeecCCCHHHHHhhhhcc-----C
Q 029198 1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----G 72 (197)
Q Consensus 1 tGatG~--vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~~-----~ 72 (197)
|||+|+ ||.+++++|+++|++|++++|++..... .. ....+.. .++.++.+|+.|+++++++++.. +
T Consensus 13 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (266)
T 3oig_A 13 MGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKS-VH----ELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGV 87 (266)
T ss_dssp ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HH----HHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSC
T ss_pred EcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHH-HH----HHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 799988 9999999999999999999997532110 00 0011112 26899999999999998887643 7
Q ss_pred ccEEEeccCCCcc------------------------chHHHHHhC----CCCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 73 FDVVYDINGREAD------------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 73 ~d~vi~~a~~~~~------------------------~~~~ll~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
+|++||+|+.... ++..+++++ +...+||++||...+... .
T Consensus 88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 156 (266)
T 3oig_A 88 IHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM-----------P 156 (266)
T ss_dssp CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC-----------T
T ss_pred eeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC-----------C
Confidence 9999999986421 011233333 334689999997764211 1
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
....| .+|...+.+.+ ..+++++.++||++..+.
T Consensus 157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (266)
T 3oig_A 157 NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLS 198 (266)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGG
T ss_pred CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccc
Confidence 23346 89999887653 358999999999998864
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.55 E-value=9.1e-15 Score=110.42 Aligned_cols=142 Identities=11% Similarity=0.116 Sum_probs=103.0
Q ss_pred CCcccchHHHHHHHHHHCCC---eEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCHHHHHhhhhcc----
Q 029198 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK---- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~---- 71 (197)
|||+|+||.+++++|+++|+ +|++.+|+.+...... ..+... ..++.++.+|+.|+++++++++..
T Consensus 39 TGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 113 (287)
T 3rku_A 39 TGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELK-----KTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEF 113 (287)
T ss_dssp ESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-----HHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGG
T ss_pred ecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHH-----HHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 79999999999999999997 9999999865532110 111111 346889999999999999888753
Q ss_pred -CccEEEeccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCC
Q 029198 72 -GFDVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV 123 (197)
Q Consensus 72 -~~d~vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 123 (197)
++|++||+||.... + ++.++..++ +..+||++||...+...
T Consensus 114 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~----------- 182 (287)
T 3rku_A 114 KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY----------- 182 (287)
T ss_dssp CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC-----------
Confidence 69999999996421 1 233344444 56799999997654211
Q ss_pred CCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.....| .+|...+.+.+ ..+++++.++||++..+.
T Consensus 183 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 225 (287)
T 3rku_A 183 PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEF 225 (287)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcc
Confidence 123346 89999887653 368999999999998873
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=7.3e-14 Score=108.07 Aligned_cols=145 Identities=14% Similarity=0.140 Sum_probs=102.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCC--CchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|.||.+++++|+++|++|++++|+.++........ ....+.....++.++.+|+.|+++++++++.. ++
T Consensus 51 TGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 130 (346)
T 3kvo_A 51 TGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGI 130 (346)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred eCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999977643221110 01122233457899999999999998888643 89
Q ss_pred cEEEeccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|+|||+||.... + ++.++..++ +..+||++||...+... ......
T Consensus 131 DilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~---------~~~~~~ 201 (346)
T 3kvo_A 131 DILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV---------WFKQHC 201 (346)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG---------GTSSSH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC---------CCCCch
Confidence 999999996321 1 233444445 55799999997654321 011233
Q ss_pred cc-hhhhhHHHHHhh------cCCcEEEEcccee
Q 029198 128 RH-KGKLNTESVLES------KGVNWTSLRPVYI 154 (197)
Q Consensus 128 ~~-~~k~~~e~~~~~------~~~~~~i~r~~~i 154 (197)
.| .+|..++.+.+. .++++..+.||++
T Consensus 202 ~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~ 235 (346)
T 3kvo_A 202 AYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTA 235 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCc
Confidence 46 899998876532 5899999999963
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.55 E-value=6.7e-15 Score=109.58 Aligned_cols=144 Identities=17% Similarity=0.092 Sum_probs=98.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|+++.+......... ...+.....++.++.+|+.|+++++++++.. ++|+
T Consensus 14 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 89 (259)
T 3edm_A 14 AGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATA----VAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHG 89 (259)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHH----HHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999966544321110 0112222457899999999999998887643 7999
Q ss_pred EEeccCCC-cc--------------------chHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGRE-AD--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~-~~--------------------~~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
+||+||.. .. ++..+.+++. ...+||++||...+... ..+...|
T Consensus 90 lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~Y~ 159 (259)
T 3edm_A 90 LVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG----------GPGALAYA 159 (259)
T ss_dssp EEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC----------STTCHHHH
T ss_pred EEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC----------CCCcHHHH
Confidence 99999854 11 1222333333 23489999997765110 1122346
Q ss_pred hhhhhHHHHHhh------cCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLES------KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~~------~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+. .++++..++||++..+.
T Consensus 160 asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~ 194 (259)
T 3edm_A 160 TSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTF 194 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC--
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcc
Confidence 899998887532 23999999999998863
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.54 E-value=6.6e-15 Score=109.45 Aligned_cols=136 Identities=15% Similarity=0.195 Sum_probs=97.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc----CccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~----~~d~v 76 (197)
|||+|+||.+++++|+++|++|++++|+.++... +...++.++.+|+.|++++.++++.. ++|++
T Consensus 15 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~l 83 (257)
T 3tl3_A 15 TGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVA-----------DLGDRARFAAADVTDEAAVASALDLAETMGTLRIV 83 (257)
T ss_dssp ETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHH-----------HTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHH-----------hcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 7999999999999999999999999995443211 12357899999999999998887643 89999
Q ss_pred EeccCCCcc------------------------c----hHHHHHhCC----------CCCcEEEEecceecccCCCCCCC
Q 029198 77 YDINGREAD------------------------E----VEPILDALP----------NLEQFIYCSSAGVYLKSDLLPHC 118 (197)
Q Consensus 77 i~~a~~~~~------------------------~----~~~ll~~~~----------~~~~~v~~Ss~~vyg~~~~~~~~ 118 (197)
||+||.... + ++.++..++ +..+||++||...+...
T Consensus 84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 157 (257)
T 3tl3_A 84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ------ 157 (257)
T ss_dssp EECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH------
T ss_pred EECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC------
Confidence 999985311 0 122223322 13479999997664211
Q ss_pred CCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+...| .+|...+.+.+ ..+++++.++||++..+.
T Consensus 158 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 200 (257)
T 3tl3_A 158 -----IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPL 200 (257)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred -----CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChh
Confidence 012346 89998887653 368999999999998874
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=2.5e-14 Score=115.30 Aligned_cols=144 Identities=18% Similarity=0.199 Sum_probs=103.1
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~----~~d~ 75 (197)
|||+|+||.+++++|+++|+ +|++++|+...... .. ....++.....++.++.+|+.|.+++.++++.. .+|.
T Consensus 232 TGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~-~~-~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~ld~ 309 (486)
T 2fr1_A 232 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADG-AG-ELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA 309 (486)
T ss_dssp ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTT-HH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred ECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHH-HH-HHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCcE
Confidence 79999999999999999998 49999998643110 00 000122233457899999999999999998743 5799
Q ss_pred EEeccCCCcc--------------------chHHHHHhCC--CCCcEEEEecce-ecccCCCCCCCCCCCCCCCCcc-hh
Q 029198 76 VYDINGREAD--------------------EVEPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH-KG 131 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~ll~~~~--~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~~~-~~ 131 (197)
|||+||.... ++.++.++++ +..+||++||.. ++|... ...| .+
T Consensus 310 VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g------------~~~Yaaa 377 (486)
T 2fr1_A 310 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG------------LGGYAPG 377 (486)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT------------CTTTHHH
T ss_pred EEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCC------------CHHHHHH
Confidence 9999996422 2455677776 678999999965 444321 2345 78
Q ss_pred hhhHHHHH---hhcCCcEEEEccceeeCCC
Q 029198 132 KLNTESVL---ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 132 k~~~e~~~---~~~~~~~~i~r~~~i~g~~ 158 (197)
|...+.+. +..|+++++++||.+.+++
T Consensus 378 ka~l~~la~~~~~~gi~v~~i~pG~~~~~g 407 (486)
T 2fr1_A 378 NAYLDGLAQQRRSDGLPATAVAWGTWAGSG 407 (486)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCBC---
T ss_pred HHHHHHHHHHHHhcCCeEEEEECCeeCCCc
Confidence 88887654 4579999999999998763
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.4e-14 Score=105.46 Aligned_cols=139 Identities=17% Similarity=0.183 Sum_probs=101.3
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||+|+||.+++++|+++| +.|++.+|+++..... ..+...++.++.+|+.|+++++++++.. ++
T Consensus 8 TGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 79 (254)
T 3kzv_A 8 TGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKL--------KEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKI 79 (254)
T ss_dssp CSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHH--------HHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred ECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHH--------HHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence 8999999999999999985 7899999976542211 1112357899999999999998887643 79
Q ss_pred cEEEeccCCCcc---------------------c----hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD---------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 74 d~vi~~a~~~~~---------------------~----~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
|++||+||.... + ++.++..++ ...++|++||...+.. ..+..
T Consensus 80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~-----------~~~~~ 148 (254)
T 3kzv_A 80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMY-----------FSSWG 148 (254)
T ss_dssp CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCS-----------SCCSH
T ss_pred cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccC-----------CCCcc
Confidence 999999997321 1 222333344 2379999999766432 11233
Q ss_pred cc-hhhhhHHHHHhh-----cCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLES-----KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~~-----~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+. .+++++.++||++.++.
T Consensus 149 ~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~ 185 (254)
T 3kzv_A 149 AYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDM 185 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCC
T ss_pred hHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchh
Confidence 57 899998887542 48999999999999875
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.53 E-value=4.1e-15 Score=110.94 Aligned_cols=144 Identities=11% Similarity=0.119 Sum_probs=96.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|........ . ....++.....++.++.+|+.|+++++++++.. ++|+
T Consensus 17 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-~-~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 94 (262)
T 3ksu_A 17 AGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTA-N-KLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDI 94 (262)
T ss_dssp ETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHH-H-HHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHH-H-HHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999998864431100 0 000112222457899999999999998887642 7999
Q ss_pred EEeccCCCccc--------------------hHHHHHh----CCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREADE--------------------VEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~~--------------------~~~ll~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
+||+||..... ...++++ +++..++|++||...+.... ....| .
T Consensus 95 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~-----------~~~~Y~a 163 (262)
T 3ksu_A 95 AINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG-----------FYSTYAG 163 (262)
T ss_dssp EEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC-----------CCCC---
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC-----------CCchhHH
Confidence 99999964211 1122222 22346899999977654221 12345 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
+|...+.+.+ ..++++..++||++..+
T Consensus 164 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (262)
T 3ksu_A 164 NKAPVEHYTRAASKELMKQQISVNAIAPGPMDTS 197 (262)
T ss_dssp --CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTH
T ss_pred HHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCc
Confidence 8888887653 35899999999999764
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.5e-14 Score=105.74 Aligned_cols=142 Identities=13% Similarity=0.109 Sum_probs=105.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.++++.|+++|++|++.+|+++...+.. .++.+...++..+.+|++|+++++++++.. ++|+
T Consensus 13 TGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~-----~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi 87 (254)
T 4fn4_A 13 TGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIV-----QELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDV 87 (254)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999876532211 233344567899999999999998887642 7999
Q ss_pred EEeccCCCcc-------------------------chHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~-------------------------~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||.... .++.++..|+ +..+||++||....... .....
T Consensus 88 LVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~-----------~~~~~ 156 (254)
T 4fn4_A 88 LCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG-----------FAGAP 156 (254)
T ss_dssp EEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS-----------SSCHH
T ss_pred EEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC-----------CCChH
Confidence 9999985321 0445566665 56799999996653111 11234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|.....+.+ .+|+++..+.||++-.+.
T Consensus 157 Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~ 194 (254)
T 4fn4_A 157 YTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNI 194 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSC
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcc
Confidence 6 88998887643 478999999999998764
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.52 E-value=2.5e-14 Score=106.08 Aligned_cols=141 Identities=16% Similarity=0.113 Sum_probs=99.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecC--CCHHHHHhhhhcc-----C
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDR--KDYDFVKSSLSAK-----G 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~--~~~~~l~~~~~~~-----~ 72 (197)
|||+|+||.+++++|+++|++|++++|+++...... ..+.. ....+.++.+|+ .|.+++.++++.. +
T Consensus 18 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~ 92 (252)
T 3f1l_A 18 TGASDGIGREAAMTYARYGATVILLGRNEEKLRQVA-----SHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPR 92 (252)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSC
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCC
Confidence 799999999999999999999999999865532111 11111 123688999999 8898888877642 7
Q ss_pred ccEEEeccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 73 FDVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 73 ~d~vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
+|++||+||.... + ++.++..++ +..+||++||...+... .+
T Consensus 93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~ 161 (252)
T 3f1l_A 93 LDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR-----------AN 161 (252)
T ss_dssp CSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC-----------TT
T ss_pred CCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC-----------CC
Confidence 9999999986311 0 233444444 56799999997654211 12
Q ss_pred CCcc-hhhhhHHHHHhh------cCCcEEEEccceeeCC
Q 029198 126 KSRH-KGKLNTESVLES------KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~~------~~~~~~i~r~~~i~g~ 157 (197)
...| .+|...+.+.+. ..+++..+.||++..+
T Consensus 162 ~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~ 200 (252)
T 3f1l_A 162 WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA 200 (252)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH
T ss_pred CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc
Confidence 2346 899998876532 2389999999999764
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.4e-14 Score=106.14 Aligned_cols=143 Identities=15% Similarity=0.170 Sum_probs=99.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc---------
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~--------- 71 (197)
|||+|++|.+++++|+++|++|+++.+......... ..++......+.++.+|+.|.++++++++..
T Consensus 13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 3icc_A 13 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEET----VYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG 88 (255)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHH----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHS
T ss_pred ECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHH----HHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhccccc
Confidence 799999999999999999999999755443321110 0122223457889999999999888776531
Q ss_pred --CccEEEeccCCCccc--------------------hHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 72 --GFDVVYDINGREADE--------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 72 --~~d~vi~~a~~~~~~--------------------~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
.+|++||+||..... ...+++++. +..+||++||...+... ..
T Consensus 89 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~ 157 (255)
T 3icc_A 89 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL-----------PD 157 (255)
T ss_dssp SSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC-----------TT
T ss_pred CCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC-----------CC
Confidence 399999999874211 222334333 34589999997764321 11
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ ..+++++.++||++..+.
T Consensus 158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 198 (255)
T 3icc_A 158 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDM 198 (255)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSS
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccc
Confidence 2346 89999887653 368999999999998875
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=3.7e-14 Score=104.65 Aligned_cols=141 Identities=16% Similarity=0.124 Sum_probs=98.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc-cCceEEEeecC--CCHHHHHhhhhcc-----C
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDR--KDYDFVKSSLSAK-----G 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~--~~~~~l~~~~~~~-----~ 72 (197)
|||+|++|.+++++|+++|++|++++|+++...... ..+... ..+..++.+|+ .+.+++.++++.. +
T Consensus 20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~ 94 (247)
T 3i1j_A 20 TGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVS-----DQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGR 94 (247)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSC
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHH-----HHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCC
Confidence 799999999999999999999999999865532111 111111 24567777777 8888888777542 7
Q ss_pred ccEEEeccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 73 FDVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 73 ~d~vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
+|++||+||.... + ++.++..++ +..+||++||...+... .+
T Consensus 95 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~ 163 (247)
T 3i1j_A 95 LDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR-----------AN 163 (247)
T ss_dssp CSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCC-----------TT
T ss_pred CCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCC-----------CC
Confidence 9999999986311 1 233444445 55799999997654211 12
Q ss_pred CCcc-hhhhhHHHHHh-------h-cCCcEEEEccceeeCC
Q 029198 126 KSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~-~~~~~~i~r~~~i~g~ 157 (197)
...| .+|...+.+.+ . .+++++.++||++..+
T Consensus 164 ~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~ 204 (247)
T 3i1j_A 164 WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG 204 (247)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc
Confidence 2346 89999887653 2 5789999999998764
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.51 E-value=4.1e-14 Score=108.81 Aligned_cols=142 Identities=13% Similarity=0.032 Sum_probs=101.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEe-cCCCCccCCCCCCCchhhh-hccCceEEEeecCCCHH----------------
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD---------------- 62 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~---------------- 62 (197)
|||+|+||.+++++|+++|++|++++ |+++...... ..+. ....++.++.+|+.|++
T Consensus 52 TGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~ 126 (328)
T 2qhx_A 52 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 126 (328)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHH
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhhcCCeEEEEEeeCCCchhccccccccccccccH
Confidence 79999999999999999999999999 8754321110 1111 12346889999999998
Q ss_pred -HHHhhhhcc-----CccEEEeccCCCcc---------------------c-----------------hHHHHHhCC--C
Q 029198 63 -FVKSSLSAK-----GFDVVYDINGREAD---------------------E-----------------VEPILDALP--N 96 (197)
Q Consensus 63 -~l~~~~~~~-----~~d~vi~~a~~~~~---------------------~-----------------~~~ll~~~~--~ 96 (197)
++.++++.. ++|+|||+||.... . ++.++..++ +
T Consensus 127 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 206 (328)
T 2qhx_A 127 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP 206 (328)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 888877643 79999999986311 0 122333333 3
Q ss_pred ------CCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 97 ------LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 97 ------~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
..+||++||...+... .+...| .+|...+.+.+ ..+++++.++||++.++.
T Consensus 207 ~~~~~~~g~IV~isS~~~~~~~-----------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 271 (328)
T 2qhx_A 207 AKHRGTNYSIINMVDAMTNQPL-----------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD 271 (328)
T ss_dssp GGGSCSCEEEEEECCTTTTSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred CcCCCCCcEEEEECchhhccCC-----------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc
Confidence 5799999997654211 123346 89999887653 358999999999999885
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.9e-14 Score=106.45 Aligned_cols=142 Identities=13% Similarity=0.100 Sum_probs=105.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.++++.|+++|++|++.+|+++...+.. .++.+...++..+.+|++|+++++++++.. ++|+
T Consensus 15 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~-----~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 89 (255)
T 4g81_D 15 TGSARGLGFAYAEGLAAAGARVILNDIRATLLAESV-----DTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDI 89 (255)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence 899999999999999999999999999866532211 223333467899999999999998877642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC---CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||..... ++.++..|. +..+||++||........ ....
T Consensus 90 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~-----------~~~~ 158 (255)
T 4g81_D 90 LINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARP-----------TVAP 158 (255)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT-----------TCHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCC-----------Cchh
Confidence 99999975321 344555553 446999999976542111 1234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|.....+.+ ..|+++..+.||++..+.
T Consensus 159 Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~ 196 (255)
T 4g81_D 159 YTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDM 196 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCch
Confidence 6 88998887643 478999999999998773
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=5.9e-14 Score=105.67 Aligned_cols=139 Identities=16% Similarity=0.156 Sum_probs=98.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||+|+||.+++++|+++|++|++++|+.+..... ..+...++.++.+|+.|++++.++++.. ++|+
T Consensus 11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 82 (281)
T 3zv4_A 11 TGGASGLGRALVDRFVAEGARVAVLDKSAERLREL--------EVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT 82 (281)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHH--------HHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999999999999999999986543211 1122357899999999999988887643 7999
Q ss_pred EEeccCCCcc-------------------------c----hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD-------------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 76 vi~~a~~~~~-------------------------~----~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
+||+||.... + ++.++..++ ...++|++||...+... ..
T Consensus 83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 151 (281)
T 3zv4_A 83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPN-----------GG 151 (281)
T ss_dssp EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSS-----------SS
T ss_pred EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCC-----------CC
Confidence 9999986311 0 122333333 33699999997654211 11
Q ss_pred CCcc-hhhhhHHHHHhh------cCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLES------KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~~------~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+. ..+++..++||++..+.
T Consensus 152 ~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~ 191 (281)
T 3zv4_A 152 GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDL 191 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--
T ss_pred CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCc
Confidence 2346 899998887532 23999999999998863
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.4e-13 Score=101.39 Aligned_cols=138 Identities=18% Similarity=0.177 Sum_probs=101.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||++.||.++++.|+++|++|++.+|+++.... ..+...++..+.+|+.|+++++++++. -++|+
T Consensus 8 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~---------~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi 78 (247)
T 3ged_A 8 TGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD---------FAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998655321 222245788999999999999887753 27999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
+||+||..... ++.++..++ +..++|++||...+.... ....|
T Consensus 79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~-----------~~~~Y~ 147 (247)
T 3ged_A 79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEP-----------DSEAYA 147 (247)
T ss_dssp EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCT-----------TCHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCC-----------CCHHHH
Confidence 99999875321 333445555 457999999976542111 12246
Q ss_pred hhhhhHHHHHh------hcCCcEEEEccceeeCCC
Q 029198 130 KGKLNTESVLE------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 ~~k~~~e~~~~------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|.....+.+ ..++++..+.||++-.+.
T Consensus 148 asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~ 182 (247)
T 3ged_A 148 SAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTE 182 (247)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCC
Confidence 88988877643 248999999999997764
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-13 Score=102.71 Aligned_cols=144 Identities=15% Similarity=0.168 Sum_probs=101.7
Q ss_pred CCcc--cchHHHHHHHHHHCCCeEEEEecCCCCc-cCCCCCCCchhhh-hccCceEEEeecCCCHHHHHhhhhcc-----
Q 029198 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK----- 71 (197)
Q Consensus 1 tGat--G~vG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~l~~~~~~~----- 71 (197)
|||+ |++|.+++++|+++|++|++++|+.... .... .++. ....++.++.+|+.|+++++++++..
T Consensus 26 TGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (267)
T 3gdg_A 26 TGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENV-----KELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFG 100 (267)
T ss_dssp TTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHH-----HHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTS
T ss_pred ECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHH-----HHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence 7999 8999999999999999999999987653 1111 1111 12357899999999999998887643
Q ss_pred CccEEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 72 GFDVVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 72 ~~d~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
++|+|||+||..... ++.++..++ +..++|++||...+... .+.+
T Consensus 101 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~ 171 (267)
T 3gdg_A 101 QIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN---------FPQE 171 (267)
T ss_dssp CCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---------SSSC
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC---------CCCC
Confidence 789999999864211 222333334 56799999997654211 0112
Q ss_pred CCcc-hhhhhHHHHHhh------cCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLES------KGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~~------~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+. ..++++.+.||++..+.
T Consensus 172 ~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~ 211 (267)
T 3gdg_A 172 QTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGL 211 (267)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSC
T ss_pred CCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccch
Confidence 3347 899998887632 23899999999998764
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.4e-13 Score=110.08 Aligned_cols=142 Identities=21% Similarity=0.256 Sum_probs=103.3
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|||+|+||.+++++|+++|+ +|++++|+....... . ....++.....++.++.+|+.|.+++.++++...+|+|||+
T Consensus 265 TGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~-~-~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~VVh~ 342 (511)
T 2z5l_A 265 TGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGA-A-ELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNAVFHT 342 (511)
T ss_dssp ETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTH-H-HHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHH-H-HHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcEEEEC
Confidence 79999999999999999998 699999986431100 0 00011222245789999999999999999985569999999
Q ss_pred cCCCcc--------------------chHHHHHhCC---CCCcEEEEecce-ecccCCCCCCCCCCCCCCCCcc-hhhhh
Q 029198 80 NGREAD--------------------EVEPILDALP---NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH-KGKLN 134 (197)
Q Consensus 80 a~~~~~--------------------~~~~ll~~~~---~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~~~-~~k~~ 134 (197)
||.... ++.++.+++. +..+||++||.. ++|... ...| .+|..
T Consensus 343 AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g------------~~~YaaaKa~ 410 (511)
T 2z5l_A 343 AGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG------------QGAYAAANAA 410 (511)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT------------BHHHHHHHHH
T ss_pred CcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC------------CHHHHHHHHH
Confidence 997422 2345666665 457999999964 454321 2346 88999
Q ss_pred HHHHHh---hcCCcEEEEccceeeC
Q 029198 135 TESVLE---SKGVNWTSLRPVYIYG 156 (197)
Q Consensus 135 ~e~~~~---~~~~~~~i~r~~~i~g 156 (197)
++.+.+ ..|+++++++||.+-+
T Consensus 411 ld~la~~~~~~gi~v~sv~pG~~~~ 435 (511)
T 2z5l_A 411 LDALAERRRAAGLPATSVAWGLWGG 435 (511)
T ss_dssp HHHHHHHHHTTTCCCEEEEECCBCS
T ss_pred HHHHHHHHHHcCCcEEEEECCcccC
Confidence 888753 5799999999998844
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.48 E-value=1.3e-13 Score=103.16 Aligned_cols=138 Identities=17% Similarity=0.067 Sum_probs=97.1
Q ss_pred CCc--ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-------
Q 029198 1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------- 71 (197)
Q Consensus 1 tGa--tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~------- 71 (197)
||| +|++|.+++++|+++|++|++++|++++....+. .+...++.++.+|+.|+++++++++..
T Consensus 13 TGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~ 85 (269)
T 2h7i_A 13 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT-------DRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 85 (269)
T ss_dssp CCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH-------TTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred ECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH-------HhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 788 9999999999999999999999998643111000 011246788999999999998887643
Q ss_pred -CccEEEeccCCCcc------c-------------------hHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCC
Q 029198 72 -GFDVVYDINGREAD------E-------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETD 121 (197)
Q Consensus 72 -~~d~vi~~a~~~~~------~-------------------~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~ 121 (197)
++|++||+||.... . +..+.+++. ...+||++||...++.
T Consensus 86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~---------- 155 (269)
T 2h7i_A 86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM---------- 155 (269)
T ss_dssp CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC----------
T ss_pred CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccccc----------
Confidence 79999999986431 0 112233322 2258999998654221
Q ss_pred CCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.....| .+|...+.+.+ ..+++++.++||++..+
T Consensus 156 --~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (269)
T 2h7i_A 156 --PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL 197 (269)
T ss_dssp --TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred --CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence 112346 88999887653 35899999999998765
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=4e-14 Score=107.12 Aligned_cols=142 Identities=13% Similarity=0.032 Sum_probs=100.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEe-cCCCCccCCCCCCCchhhh-hccCceEEEeecCCCHH----------------
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD---------------- 62 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~---------------- 62 (197)
|||+|+||.+++++|+++|++|++++ |+++...... ..+. ....++.++.+|+.|++
T Consensus 15 TGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 89 (291)
T 1e7w_A 15 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 89 (291)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred ECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-----HHHhhhcCCeeEEEEeecCCcccccccccccccccchH
Confidence 89999999999999999999999999 8754321110 1111 12346899999999998
Q ss_pred -HHHhhhhcc-----CccEEEeccCCCcc---------------------c-----------------hHHHHHhCC--C
Q 029198 63 -FVKSSLSAK-----GFDVVYDINGREAD---------------------E-----------------VEPILDALP--N 96 (197)
Q Consensus 63 -~l~~~~~~~-----~~d~vi~~a~~~~~---------------------~-----------------~~~ll~~~~--~ 96 (197)
++.++++.. ++|++||+||.... . ++.++..++ +
T Consensus 90 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~ 169 (291)
T 1e7w_A 90 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP 169 (291)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 888877643 79999999986321 0 122333333 3
Q ss_pred ------CCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 97 ------LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 97 ------~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
..+||++||...+... .....| .+|...+.+.+ ..+++++.++||++..+.
T Consensus 170 ~~~~~~~g~Iv~isS~~~~~~~-----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 234 (291)
T 1e7w_A 170 AKHRGTNYSIINMVDAMTNQPL-----------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD 234 (291)
T ss_dssp GGGSCSCEEEEEECCTTTTSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred CCCCCCCcEEEEEechhhcCCC-----------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence 5789999997654321 123346 89999887653 368999999999997763
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.48 E-value=6.6e-14 Score=104.52 Aligned_cols=139 Identities=19% Similarity=0.175 Sum_probs=101.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.++++.|+++|++|++.+|+++.... ...+...++..+.+|+.|+++++++++.. ++|+
T Consensus 35 TGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~--------~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 35 TGATSGIGLAAAKRFVAEGARVFITGRRKDVLDA--------AIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998765321 12233467889999999999998887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
+||+||..... ++.++..+++..++|++||........ ....| .
T Consensus 107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~-----------~~~~Y~a 175 (273)
T 4fgs_A 107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTP-----------AFSVYAA 175 (273)
T ss_dssp EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCT-----------TCHHHHH
T ss_pred EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCC-----------CchHHHH
Confidence 99999874221 233334444445899999866532111 12346 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+|.....+.+ ..|+++..+.||++-.+.
T Consensus 176 sKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~ 210 (273)
T 4fgs_A 176 SKAALRSFARNWILDLKDRGIRINTLSPGPTETTG 210 (273)
T ss_dssp HHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC--
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChh
Confidence 9999887653 468999999999998764
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.8e-13 Score=101.49 Aligned_cols=141 Identities=18% Similarity=0.141 Sum_probs=104.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.++++.|+++|.+|++.+|+.+.... ...+.+...++.++.+|++|+++++++++.. ++|+
T Consensus 13 TGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~------~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDi 86 (258)
T 4gkb_A 13 TGGASGIGGAISMRLAEERAIPVVFARHAPDGAF------LDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDG 86 (258)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHH------HHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHH------HHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 7999999999999999999999999998765221 1123344568899999999999988877542 7999
Q ss_pred EEeccCCCccc-----------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREADE-----------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~~-----------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
+||+||..... ++.++..++ +..+||++||........ ....| .
T Consensus 87 LVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~-----------~~~~Y~a 155 (258)
T 4gkb_A 87 LVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQG-----------NTSGYCA 155 (258)
T ss_dssp EEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCS-----------SCHHHHH
T ss_pred EEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCC-----------CchHHHH
Confidence 99999974211 344455555 447999999976542111 12346 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+|.....+.+ .+|+++..+.||++-.+.
T Consensus 156 sKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~ 190 (258)
T 4gkb_A 156 SKGAQLALTREWAVALREHGVRVNAVIPAEVMTPL 190 (258)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSC
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChh
Confidence 8999887643 479999999999998764
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.5e-13 Score=101.86 Aligned_cols=139 Identities=14% Similarity=0.131 Sum_probs=90.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhh-hc-cCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL-SA-KGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~-~~-~~~d~vi~ 78 (197)
|||+|++|.+++++|+++|++|++++|+++..... ..+.....++..+ |..+.+.+.+.+ +. -++|+|||
T Consensus 7 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~------~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~ 78 (254)
T 1zmt_A 7 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS 78 (254)
T ss_dssp SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH------HHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH------HHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence 89999999999999999999999999986553211 0111112234333 555544332222 11 27999999
Q ss_pred ccCCC-ccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 79 INGRE-ADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 79 ~a~~~-~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
+||.. ... ++.++..++ +..+||++||...+... .+...| .
T Consensus 79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~ 147 (254)
T 1zmt_A 79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW-----------KELSTYTS 147 (254)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC-----------TTCHHHHH
T ss_pred CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC-----------CCchHHHH
Confidence 99865 211 222344443 56799999997664211 122346 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+|...+.+.+ ..++++++++||+++|+.
T Consensus 148 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~ 182 (254)
T 1zmt_A 148 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSED 182 (254)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBT
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence 9999887653 358999999999997764
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.47 E-value=5.2e-14 Score=107.95 Aligned_cols=145 Identities=17% Similarity=0.129 Sum_probs=97.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCC-----CchhhhhccCceEEEeecCCCHHHHHhhhhcc----
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE-----SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~---- 71 (197)
|||+|+||.+++++|+++|++|++++|+........... ...++.....++.++.+|+.|++++.++++..
T Consensus 33 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 112 (322)
T 3qlj_A 33 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETF 112 (322)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 899999999999999999999999998731111000000 01122223457889999999999998887643
Q ss_pred -CccEEEeccCCCccc--------------------hHHHHHh----CC--C------CCcEEEEecceecccCCCCCCC
Q 029198 72 -GFDVVYDINGREADE--------------------VEPILDA----LP--N------LEQFIYCSSAGVYLKSDLLPHC 118 (197)
Q Consensus 72 -~~d~vi~~a~~~~~~--------------------~~~ll~~----~~--~------~~~~v~~Ss~~vyg~~~~~~~~ 118 (197)
++|+|||+||..... +..++++ ++ + ..+||++||...+....
T Consensus 113 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~----- 187 (322)
T 3qlj_A 113 GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSV----- 187 (322)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBT-----
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCC-----
Confidence 799999999974211 1122222 22 1 15899999976542211
Q ss_pred CCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
....| .+|...+.+.+ ..+++++.++|| +..+
T Consensus 188 ------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~ 227 (322)
T 3qlj_A 188 ------GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTR 227 (322)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSC
T ss_pred ------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCc
Confidence 12346 89999888753 368999999999 6543
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.5e-13 Score=103.29 Aligned_cols=138 Identities=14% Similarity=0.107 Sum_probs=97.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc----cCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~----~~~d~v 76 (197)
|||+|+||.+++++|+++|++|++++|+.+..... ..+...++.++.+|+.|.+++.++++. .++|++
T Consensus 36 TGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~--------~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l 107 (281)
T 3ppi_A 36 SGGAGGLGEATVRRLHADGLGVVIADLAAEKGKAL--------ADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA 107 (281)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHH--------HHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence 79999999999999999999999999986543211 112235789999999999999888763 268999
Q ss_pred Eec-cCCCcc-------------------------chHHHHHhCC------------CCCcEEEEecceecccCCCCCCC
Q 029198 77 YDI-NGREAD-------------------------EVEPILDALP------------NLEQFIYCSSAGVYLKSDLLPHC 118 (197)
Q Consensus 77 i~~-a~~~~~-------------------------~~~~ll~~~~------------~~~~~v~~Ss~~vyg~~~~~~~~ 118 (197)
||+ ++.... +..++++++. +..+||++||...+...
T Consensus 108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 181 (281)
T 3ppi_A 108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ------ 181 (281)
T ss_dssp EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC------
T ss_pred EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC------
Confidence 999 543210 0111222211 23589999997765321
Q ss_pred CCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.....| .+|...+.+.+ ..+++++.++||++..+
T Consensus 182 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 223 (281)
T 3ppi_A 182 -----IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTP 223 (281)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred -----CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCch
Confidence 123346 89998887653 35899999999999875
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=5.5e-13 Score=99.17 Aligned_cols=132 Identities=17% Similarity=0.167 Sum_probs=97.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||++.||.++++.|+++|++|++.+|+..+.. .+...+.+|+.+++++.++++. -++|+
T Consensus 17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~---------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 81 (261)
T 4h15_A 17 TAGTKGAGAATVSLFLELGAQVLTTARARPEGL---------------PEELFVEADLTTKEGCAIVAEATRQRLGGVDV 81 (261)
T ss_dssp SCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------------CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred eccCcHHHHHHHHHHHHcCCEEEEEECCchhCC---------------CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 899999999999999999999999999765421 2345788999999998887753 26999
Q ss_pred EEeccCCCcc--------------------------chHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD--------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~--------------------------~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+||+||.... .++.++..++ +..++|++||....-.. +....
T Consensus 82 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~----------~~~~~ 151 (261)
T 4h15_A 82 IVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPL----------PESTT 151 (261)
T ss_dssp EEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TTTCH
T ss_pred EEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCC----------CCccH
Confidence 9999985311 0344555555 56799999996643110 01123
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.| .+|...+.+.+ ..|+++..+.||++-.+
T Consensus 152 ~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~ 189 (261)
T 4h15_A 152 AYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETE 189 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCc
Confidence 46 88998887643 47899999999998765
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.8e-13 Score=100.54 Aligned_cols=140 Identities=18% Similarity=0.144 Sum_probs=104.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||++.||.++++.|+++|++|++.+|+..+.. ...+.+...++..+.+|+.|+++++++++.-++|+++|+|
T Consensus 15 TGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~-------~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA 87 (247)
T 4hp8_A 15 TGANTGLGQAIAVGLAAAGAEVVCAARRAPDET-------LDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA 87 (247)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH-------HHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred eCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHH-------HHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence 899999999999999999999999999754210 1223333467899999999999999888777899999999
Q ss_pred CCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhh
Q 029198 81 GREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK 132 (197)
Q Consensus 81 ~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k 132 (197)
|..... ++.++..|. + ..+||++||........ ....| .+|
T Consensus 88 Gi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~-----------~~~~Y~asK 156 (247)
T 4hp8_A 88 GIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGI-----------RVPSYTAAK 156 (247)
T ss_dssp CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCS-----------SCHHHHHHH
T ss_pred CCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCC-----------CChHHHHHH
Confidence 975321 344555554 3 46999999966532110 12246 899
Q ss_pred hhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 133 LNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 133 ~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.....+.+ ..|+++..+.||++-.|.
T Consensus 157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~ 189 (247)
T 4hp8_A 157 HGVAGLTKLLANEWAAKGINVNAIAPGYIETNN 189 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcc
Confidence 98887643 478999999999998763
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.2e-13 Score=100.45 Aligned_cols=122 Identities=16% Similarity=0.046 Sum_probs=91.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||+|+||.+++++|+++|++|++++|+.+ +|+.|+++++++++.. ++|++||+
T Consensus 12 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------------~D~~~~~~v~~~~~~~g~id~lv~n 66 (223)
T 3uce_A 12 LGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------------LDISDEKSVYHYFETIGAFDHLIVT 66 (223)
T ss_dssp ETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------------CCTTCHHHHHHHHHHHCSEEEEEEC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------------cCCCCHHHHHHHHHHhCCCCEEEEC
Confidence 799999999999999999999999998633 6899999999888753 79999999
Q ss_pred cCCCc-c--------------------chHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhh
Q 029198 80 NGREA-D--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL 133 (197)
Q Consensus 80 a~~~~-~--------------------~~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~ 133 (197)
||... . ++..+++++. ...++|++||...+... .+...| .+|.
T Consensus 67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~~~~Y~asK~ 135 (223)
T 3uce_A 67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV-----------ANTYVKAAINA 135 (223)
T ss_dssp CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC-----------TTCHHHHHHHH
T ss_pred CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC-----------CCchHHHHHHH
Confidence 99641 1 1222333332 23589999997765321 123346 8999
Q ss_pred hHHHHHh----hc-CCcEEEEccceeeCCC
Q 029198 134 NTESVLE----SK-GVNWTSLRPVYIYGPL 158 (197)
Q Consensus 134 ~~e~~~~----~~-~~~~~i~r~~~i~g~~ 158 (197)
..+.+.+ +. .++++.++||++.++.
T Consensus 136 a~~~~~~~la~e~~~i~vn~v~PG~v~t~~ 165 (223)
T 3uce_A 136 AIEATTKVLAKELAPIRVNAISPGLTKTEA 165 (223)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEECSBCSGG
T ss_pred HHHHHHHHHHHhhcCcEEEEEEeCCCcchh
Confidence 9887653 22 3999999999999874
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.45 E-value=5.6e-14 Score=103.67 Aligned_cols=136 Identities=18% Similarity=0.187 Sum_probs=85.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHh---hhhc-cCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS---SLSA-KGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~---~~~~-~~~d~v 76 (197)
|||+|++|.+++++|++ |+.|++++|+++..... .+ ..++.++.+|+.+.+.... .++. .++|+|
T Consensus 11 TGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~---------~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l 79 (245)
T 3e9n_A 11 TGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAAL---------AE-IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTL 79 (245)
T ss_dssp ESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHH---------HT-STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEE
T ss_pred EcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHH---------Hh-hcCCcceecccchHHHHHHHHHHHHhcCCCCEE
Confidence 79999999999999987 99999999986543211 11 2468899999988765222 2222 279999
Q ss_pred EeccCCCccc------------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 77 YDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 77 i~~a~~~~~~------------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
||+||..... ++.++..++ ...++|++||...+... .+...| .
T Consensus 80 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~a 148 (245)
T 3e9n_A 80 VHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPH-----------PGNTIYAA 148 (245)
T ss_dssp EECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC---------------------CHHHHH
T ss_pred EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCC-----------CCchHHHH
Confidence 9999874211 233344444 33789999997765421 123346 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
+|...+.+.+ ..+++++.++||++.++.
T Consensus 149 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 183 (245)
T 3e9n_A 149 SKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPM 183 (245)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCch
Confidence 9999988753 368999999999998874
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.44 E-value=8.2e-13 Score=98.11 Aligned_cols=142 Identities=13% Similarity=0.082 Sum_probs=98.2
Q ss_pred CCccc--chHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc-cCceEEEeecCCCHHHHHhhhhc-----cC
Q 029198 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KG 72 (197)
Q Consensus 1 tGatG--~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~l~~~~~~-----~~ 72 (197)
|||+| .||.++++.|+++|++|++.+|+++...... ..+.+. ..++.++.+|++|++++.++++. -+
T Consensus 12 TGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 86 (256)
T 4fs3_A 12 MGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELE-----KLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGN 86 (256)
T ss_dssp ECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-----HHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred ECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 68876 8999999999999999999999865532110 111222 24788999999999998887753 27
Q ss_pred ccEEEeccCCCccc----------------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 73 FDVVYDINGREADE----------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 73 ~d~vi~~a~~~~~~----------------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
+|+++|+||..... .+..+..+++..+||++||...... ..
T Consensus 87 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~-----------~~ 155 (256)
T 4fs3_A 87 IDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA-----------VQ 155 (256)
T ss_dssp CSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC-----------CT
T ss_pred CCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC-----------cc
Confidence 99999999863110 0111122224468999999654211 01
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
....| .+|...+.+.+ ..|+++..+.||++-.+.
T Consensus 156 ~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~ 197 (256)
T 4fs3_A 156 NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLS 197 (256)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGG
T ss_pred cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChh
Confidence 12346 88998887643 478999999999998764
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.5e-15 Score=115.54 Aligned_cols=145 Identities=12% Similarity=0.128 Sum_probs=95.5
Q ss_pred CCcccchHHHHHHHHHHCCC-------eEEEEecCCC-CccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccC
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKA-PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-------~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~ 72 (197)
|||+||+|++++..|++.|+ +|+++++.+. ...... ..++.. ..+.+. +|+.+.+++.++++ +
T Consensus 10 tGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~----~~dl~~--~~~~~~-~di~~~~~~~~a~~--~ 80 (327)
T 1y7t_A 10 TGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGV----VMELED--CAFPLL-AGLEATDDPKVAFK--D 80 (327)
T ss_dssp SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHH----HHHHHT--TTCTTE-EEEEEESCHHHHTT--T
T ss_pred ECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccch----hhhhhc--cccccc-CCeEeccChHHHhC--C
Confidence 79999999999999999986 8999998642 100000 001110 112233 57766666777787 8
Q ss_pred ccEEEeccCCCc--------------cchHHHHHhCC--C-CC-cEEEEecce-ecccCCCCCCC-CCC-CCCCCCcc-h
Q 029198 73 FDVVYDINGREA--------------DEVEPILDALP--N-LE-QFIYCSSAG-VYLKSDLLPHC-ETD-TVDPKSRH-K 130 (197)
Q Consensus 73 ~d~vi~~a~~~~--------------~~~~~ll~~~~--~-~~-~~v~~Ss~~-vyg~~~~~~~~-e~~-~~~~~~~~-~ 130 (197)
+|+|||+|+... ..+++++++++ + .+ +++++|+.. +.. +.. +.. ...|.+.| .
T Consensus 81 ~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~-----~~~~~~~~~~~p~~~yg~ 155 (327)
T 1y7t_A 81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA-----LIAYKNAPGLNPRNFTAM 155 (327)
T ss_dssp CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----HHHHHTCTTSCGGGEEEC
T ss_pred CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-----HHHHHHcCCCChhheecc
Confidence 999999998742 23677888887 4 54 777777643 111 001 111 13345567 8
Q ss_pred hhhhHHHHH----hhcCCcEEEEccceeeCCCC
Q 029198 131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 131 ~k~~~e~~~----~~~~~~~~i~r~~~i~g~~~ 159 (197)
+|...|++. +..+++.+++|++++||++.
T Consensus 156 tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 156 TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp CHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred chHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence 999888864 45799999999999999864
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=4.8e-13 Score=99.45 Aligned_cols=141 Identities=18% Similarity=0.162 Sum_probs=97.8
Q ss_pred CCcccchHHHHHHHHHH---CCCeEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCHHHHHhhhhcc----
Q 029198 1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK---- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~---- 71 (197)
|||+|+||.+++++|++ .|++|++++|+++...... .++... ..++.++.+|+.|++++.++++..
T Consensus 12 TGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (259)
T 1oaa_A 12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK-----EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP 86 (259)
T ss_dssp SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH-----HHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred eCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHH-----HHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhcc
Confidence 79999999999999999 8999999999865422110 111111 346889999999999988877532
Q ss_pred ---Ccc--EEEeccCCCc---------cc------------------hHHHHHhCC-C---CCcEEEEecceecccCCCC
Q 029198 72 ---GFD--VVYDINGREA---------DE------------------VEPILDALP-N---LEQFIYCSSAGVYLKSDLL 115 (197)
Q Consensus 72 ---~~d--~vi~~a~~~~---------~~------------------~~~ll~~~~-~---~~~~v~~Ss~~vyg~~~~~ 115 (197)
++| ++||+||... .. ++.++..++ . ..+||++||...+...
T Consensus 87 ~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 163 (259)
T 1oaa_A 87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY--- 163 (259)
T ss_dssp CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC---
T ss_pred ccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC---
Confidence 467 9999998631 11 122334444 2 2579999997765211
Q ss_pred CCCCCCCCCCCCcc-hhhhhHHHHHhh-----cCCcEEEEccceeeCC
Q 029198 116 PHCETDTVDPKSRH-KGKLNTESVLES-----KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 116 ~~~e~~~~~~~~~~-~~k~~~e~~~~~-----~~~~~~i~r~~~i~g~ 157 (197)
.+...| .+|...+.+.+. .+++++.++||++-.+
T Consensus 164 --------~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~ 203 (259)
T 1oaa_A 164 --------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND 203 (259)
T ss_dssp --------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred --------CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc
Confidence 123347 899999887642 2489999999988655
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=7.1e-13 Score=106.80 Aligned_cols=144 Identities=19% Similarity=0.209 Sum_probs=104.6
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~----~~d~ 75 (197)
|||+|.||.+++++|+++|+ +|++++|+....... . ....++.....++.++.+|+.|.+++.++++.. .+|+
T Consensus 245 TGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~-~-~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ld~ 322 (496)
T 3mje_A 245 TGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGA-A-ELRAELEQLGVRVTIAACDAADREALAALLAELPEDAPLTA 322 (496)
T ss_dssp ETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTH-H-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSCEEE
T ss_pred ECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHH-H-HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCCCeE
Confidence 79999999999999999998 888888874331110 0 001122333467999999999999999988742 6999
Q ss_pred EEeccCCC-cc--------------------chHHHHHhCC--CCCcEEEEecce-ecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGRE-AD--------------------EVEPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~-~~--------------------~~~~ll~~~~--~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
|||+||.. .. ++.++.+++. ...+||++||.. ++|.. ....| .
T Consensus 323 vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~------------g~~~YaA 390 (496)
T 3mje_A 323 VFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSG------------GQPGYAA 390 (496)
T ss_dssp EEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCT------------TCHHHHH
T ss_pred EEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCC------------CcHHHHH
Confidence 99999975 21 2455667666 667999999965 44321 12346 8
Q ss_pred hhhhHHHHH---hhcCCcEEEEccceeeCCC
Q 029198 131 GKLNTESVL---ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 131 ~k~~~e~~~---~~~~~~~~i~r~~~i~g~~ 158 (197)
+|...+.+. +..|++++++.||.+.+++
T Consensus 391 aKa~ldala~~~~~~Gi~v~sV~pG~w~~~g 421 (496)
T 3mje_A 391 ANAYLDALAEHRRSLGLTASSVAWGTWGEVG 421 (496)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEECEESSSC
T ss_pred HHHHHHHHHHHHHhcCCeEEEEECCcccCCc
Confidence 888887765 4579999999999987764
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.39 E-value=1.1e-12 Score=104.76 Aligned_cols=139 Identities=18% Similarity=0.185 Sum_probs=96.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc------Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~------~~d 74 (197)
|||+|.||.+++++|+++|++|++++|+..... + ....+ ..++.++.+|+.|.+++.++++.. .+|
T Consensus 219 TGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~--l-----~~~~~-~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id 290 (454)
T 3u0b_A 219 TGAARGIGATIAEVFARDGATVVAIDVDGAAED--L-----KRVAD-KVGGTALTLDVTADDAVDKITAHVTEHHGGKVD 290 (454)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHH--H-----HHHHH-HHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred eCCchHHHHHHHHHHHHCCCEEEEEeCCccHHH--H-----HHHHH-HcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence 899999999999999999999999998643210 0 00011 124678999999999888877532 499
Q ss_pred EEEeccCCCccc--------------------hHH----HHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE--------------------VEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~--------------------~~~----ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+|||+||..... ..+ ++..++ +..+||++||...+.... ....
T Consensus 291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~-----------g~~~ 359 (454)
T 3u0b_A 291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR-----------GQTN 359 (454)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT-----------TCHH
T ss_pred EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC-----------CCHH
Confidence 999999975321 222 333333 457999999966542111 1234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..|++++.++||++..+.
T Consensus 360 YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 397 (454)
T 3u0b_A 360 YATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKM 397 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChh
Confidence 6 88997776542 468999999999998764
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.7e-13 Score=101.10 Aligned_cols=136 Identities=13% Similarity=0.143 Sum_probs=87.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEE-e--cCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHH-Hhhhhc-cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLF-T--RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLSA-KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l-~~~~~~-~~~d~ 75 (197)
|||+|+||.+++++|+++|++|+++ + |+++...... .+. .+.... |..+.+.+ .++.+. -++|+
T Consensus 7 TGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~--------~~~-~~~~~~--~~~~v~~~~~~~~~~~g~iD~ 75 (244)
T 1zmo_A 7 THARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFE--------SEN-PGTIAL--AEQKPERLVDATLQHGEAIDT 75 (244)
T ss_dssp SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH--------HHS-TTEEEC--CCCCGGGHHHHHGGGSSCEEE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHH--------HHh-CCCccc--CHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999 6 8754421110 001 111211 44443322 222222 27999
Q ss_pred EEeccCCCcc---c------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD---E------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 76 vi~~a~~~~~---~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 126 (197)
|||+||.... . ++.++..++ +..+||++||...+... ...
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~ 144 (244)
T 1zmo_A 76 IVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL-----------AYN 144 (244)
T ss_dssp EEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTC
T ss_pred EEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC-----------CCc
Confidence 9999986432 1 122344443 46799999997765321 123
Q ss_pred Ccc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 127 ~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
..| .+|...+.+.+ ..+++++.++||++..+.
T Consensus 145 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 184 (244)
T 1zmo_A 145 PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPT 184 (244)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCc
Confidence 356 89999887653 358999999999998774
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.4e-12 Score=104.60 Aligned_cols=141 Identities=15% Similarity=0.086 Sum_probs=96.7
Q ss_pred CCcccchHHHHHHHHHHCCCe-EEEE-ecCCCCcc---------CCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhh
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQ-VTLF-TRGKAPIA---------QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS 69 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~-V~~~-~r~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 69 (197)
|||+|.||.+++++|+++|++ |+++ +|+..... ... .....++.....++.++.+|+.|.+++.++++
T Consensus 257 TGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~-~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~ 335 (525)
T 3qp9_A 257 TGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGL-AGLVAELADLGATATVVTCDLTDAEAAARLLA 335 (525)
T ss_dssp SSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------C-HHHHHHHHHHTCEEEEEECCTTSHHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHH-HHHHHHHHhcCCEEEEEECCCCCHHHHHHHHH
Confidence 899999999999999999987 6666 77743200 000 00011223334679999999999999999987
Q ss_pred cc----CccEEEeccCCCcc--------------------chHHHHHhCC------C-CCcEEEEecceec-ccCCCCCC
Q 029198 70 AK----GFDVVYDINGREAD--------------------EVEPILDALP------N-LEQFIYCSSAGVY-LKSDLLPH 117 (197)
Q Consensus 70 ~~----~~d~vi~~a~~~~~--------------------~~~~ll~~~~------~-~~~~v~~Ss~~vy-g~~~~~~~ 117 (197)
.. .+|.|||+||.... ++.++.+++. + ..+||++||...+ |..
T Consensus 336 ~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~----- 410 (525)
T 3qp9_A 336 GVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGA----- 410 (525)
T ss_dssp TSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCT-----
T ss_pred HHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCC-----
Confidence 53 58999999997422 1233333332 2 6799999996643 221
Q ss_pred CCCCCCCCCCcc-hhhhhHHHHHh---hcCCcEEEEcccee
Q 029198 118 CETDTVDPKSRH-KGKLNTESVLE---SKGVNWTSLRPVYI 154 (197)
Q Consensus 118 ~e~~~~~~~~~~-~~k~~~e~~~~---~~~~~~~i~r~~~i 154 (197)
....| .+|..++.+.+ ..|++++++.||.+
T Consensus 411 -------g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~ 444 (525)
T 3qp9_A 411 -------GQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW 444 (525)
T ss_dssp -------TCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB
T ss_pred -------CCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence 12346 88988888763 46899999999998
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=3.5e-12 Score=97.60 Aligned_cols=142 Identities=15% Similarity=0.132 Sum_probs=89.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCC-CCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ-LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
|||+|+||.+++++|+++|++|++.++........ ..........+.........+|+.+.+++.++++. -++|
T Consensus 15 TGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 94 (319)
T 1gz6_A 15 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRID 94 (319)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHTSCCC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 89999999999999999999999987743210000 00000000001100111235799998776665432 2799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecce-ecccCCCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~~~ 127 (197)
+|||+||..... ++.++..++ +..+||++||.. .++.. +..
T Consensus 95 ~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~------------~~~ 162 (319)
T 1gz6_A 95 VVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF------------GQA 162 (319)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT------------TCH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC------------CCH
Confidence 999999864211 233444444 567999999964 44421 123
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEcccee
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYI 154 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i 154 (197)
.| .+|...+.+.+ ..+++++.++||++
T Consensus 163 ~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~ 197 (319)
T 1gz6_A 163 NYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 197 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence 46 89999887653 35899999999987
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=6.3e-11 Score=89.70 Aligned_cols=143 Identities=10% Similarity=-0.044 Sum_probs=85.0
Q ss_pred CCcc--cchHHHHHHHHHHCCCeEEEEecCC-----------CCccCCCCCCCchhhhhcc--CceEEEeec--------
Q 029198 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGK-----------APIAQQLPGESDQEFAEFS--SKILHLKGD-------- 57 (197)
Q Consensus 1 tGat--G~vG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~~~~~~~~~~~~~~--~~~~~~~~d-------- 57 (197)
|||+ |+||.+++++|+++|++|++++|++ .+... .. ++.... .....+.+|
T Consensus 14 TGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~d 87 (297)
T 1d7o_A 14 AGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQ-SR-----VLPDGSLMEIKKVYPLDAVFDNPED 87 (297)
T ss_dssp ECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTG-GG-----BCTTSSBCCEEEEEEECTTCCSGGG
T ss_pred ECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhh-hh-----hhccccccccccccccceeccchhh
Confidence 7998 9999999999999999999998642 11111 00 000000 002233333
Q ss_pred CC----C--------HHHHHhhhhc-----cCccEEEeccCCCc---c-------------------chHHHHHhCC---
Q 029198 58 RK----D--------YDFVKSSLSA-----KGFDVVYDINGREA---D-------------------EVEPILDALP--- 95 (197)
Q Consensus 58 ~~----~--------~~~l~~~~~~-----~~~d~vi~~a~~~~---~-------------------~~~~ll~~~~--- 95 (197)
+. | +++++++++. -++|++||+||... . ++..+++++.
T Consensus 88 v~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 167 (297)
T 1d7o_A 88 VPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIM 167 (297)
T ss_dssp SCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 22 2 3344444432 17999999997521 0 1222333332
Q ss_pred -CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh--------hcCCcEEEEccceeeCCCC
Q 029198 96 -NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE--------SKGVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 96 -~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~--------~~~~~~~i~r~~~i~g~~~ 159 (197)
...+||++||...+.... .....| .+|...+.+.+ ..+++++.++||++.++..
T Consensus 168 ~~~g~iv~isS~~~~~~~~----------~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~ 231 (297)
T 1d7o_A 168 NPGGASISLTYIASERIIP----------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAA 231 (297)
T ss_dssp EEEEEEEEEECGGGTSCCT----------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCS
T ss_pred ccCceEEEEeccccccCCC----------CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchh
Confidence 226899999976542111 111246 89999887642 2689999999999999853
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.12 E-value=3.8e-10 Score=95.88 Aligned_cols=143 Identities=17% Similarity=0.188 Sum_probs=101.4
Q ss_pred CCcccchHHHHHHHHH-HCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc----Ccc
Q 029198 1 MGGTRFIGVFLSRLLV-KEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~-~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~----~~d 74 (197)
|||+|.+|.+++++|+ ++|. +|++++|+....... . ....++.....++.++.+|++|.++++++++.. .+|
T Consensus 536 tGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~-~-~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~~id 613 (795)
T 3slk_A 536 TGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGA-A-ELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHPLT 613 (795)
T ss_dssp ETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTH-H-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEE
T ss_pred ccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHH-H-HHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCE
Confidence 6999999999999999 7898 699999984332110 0 001122333457999999999999999988643 689
Q ss_pred EEEeccCCCc--------------------cchHHHHHhCC-CCCcEEEEeccee-cccCCCCCCCCCCCCCCCCcc-hh
Q 029198 75 VVYDINGREA--------------------DEVEPILDALP-NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRH-KG 131 (197)
Q Consensus 75 ~vi~~a~~~~--------------------~~~~~ll~~~~-~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~~~-~~ 131 (197)
.|||+||... .++.++.+++. .. +||++||... .|... ...| .+
T Consensus 614 ~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~g~~g------------~~~YaAa 680 (795)
T 3slk_A 614 AVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVLGSGG------------QGNYAAA 680 (795)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHHTCSS------------CHHHHHH
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcCCCCC------------CHHHHHH
Confidence 9999998742 23555666665 45 8999999664 33221 2346 77
Q ss_pred hhhHHHHH---hhcCCcEEEEccceeeCCC
Q 029198 132 KLNTESVL---ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 132 k~~~e~~~---~~~~~~~~i~r~~~i~g~~ 158 (197)
|...+.+. +..|++++.+.||.+-.++
T Consensus 681 ka~~~alA~~~~~~Gi~v~sI~pG~v~t~g 710 (795)
T 3slk_A 681 NSFLDALAQQRQSRGLPTRSLAWGPWAEHG 710 (795)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCSCCC
T ss_pred HHHHHHHHHHHHHcCCeEEEEECCeECcch
Confidence 87666554 4579999999999887653
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.11 E-value=7.2e-11 Score=97.76 Aligned_cols=142 Identities=13% Similarity=0.091 Sum_probs=82.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhh-hhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||+|.||.+++++|+++|++|++++|................. .+.........+|+.|.+++.++++.. ++|
T Consensus 25 TGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~iD 104 (613)
T 3oml_A 25 TGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAIKAFGRVD 104 (613)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC----------
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHHHHCCCCc
Confidence 89999999999999999999999998832211000000000000 111111112347999988877776532 699
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEeccee-cccCCCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~ 127 (197)
++||+||..... ++.++..++ +..+||++||... ++.. ...
T Consensus 105 iLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~------------~~~ 172 (613)
T 3oml_A 105 ILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF------------GQV 172 (613)
T ss_dssp CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT------------TCH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC------------CCh
Confidence 999999974221 233344444 4579999999654 3321 123
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEcccee
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYI 154 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i 154 (197)
.| .+|...+.+.+ ..|+.+..+.||.+
T Consensus 173 ~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~ 207 (613)
T 3oml_A 173 NYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA 207 (613)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence 46 89998887653 46899999999975
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.06 E-value=8.4e-10 Score=84.75 Aligned_cols=145 Identities=7% Similarity=-0.099 Sum_probs=90.4
Q ss_pred CCccc--chHHHHHHHHHHCCCeEEEEecCC---------CCccCCCCCCCchhhhhccCceEEEeecCCCH--H-----
Q 029198 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGK---------APIAQQLPGESDQEFAEFSSKILHLKGDRKDY--D----- 62 (197)
Q Consensus 1 tGatG--~vG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~----- 62 (197)
|||++ .||.+++++|+++|++|++.+|++ ++....... ..........+.++.+|+.+. +
T Consensus 8 TGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~ 85 (329)
T 3lt0_A 8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDM--IIDKDKKMNILDMLPFDASFDTANDIDEE 85 (329)
T ss_dssp ECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGG--BCSSSCBCCEEEEEECCTTCSSGGGCCHH
T ss_pred ECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHH--HHhhcccccccccccccccccchhhhhhh
Confidence 68764 999999999999999999777654 111100000 000001123467888888776 5
Q ss_pred -------------HHHhhhhc-----cCccEEEeccCCCc---c-------------------c----hHHHHHhCCCCC
Q 029198 63 -------------FVKSSLSA-----KGFDVVYDINGREA---D-------------------E----VEPILDALPNLE 98 (197)
Q Consensus 63 -------------~l~~~~~~-----~~~d~vi~~a~~~~---~-------------------~----~~~ll~~~~~~~ 98 (197)
++.++++. -++|++||+||... . + ++.++..++...
T Consensus 86 ~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g 165 (329)
T 3lt0_A 86 TKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQS 165 (329)
T ss_dssp HHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred hcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCC
Confidence 66665543 27999999998531 0 0 222333344226
Q ss_pred cEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHH-------hh-cCCcEEEEccceeeCC
Q 029198 99 QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL-------ES-KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 99 ~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~-------~~-~~~~~~i~r~~~i~g~ 157 (197)
+||++||...+.... .....| .+|...+.+. .. .++++..+.||++..+
T Consensus 166 ~Iv~isS~~~~~~~~----------~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 166 SIISLTYHASQKVVP----------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp EEEEEECGGGTSCCT----------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred eEEEEeCccccCCCC----------cchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence 899999976532111 111146 8898887764 24 6999999999999765
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=6.5e-09 Score=80.98 Aligned_cols=148 Identities=10% Similarity=-0.045 Sum_probs=97.6
Q ss_pred CCcccchHHHHHHHHHH-CCCeEEEEecCCCCccCCCCC-------CCchhhhhccCceEEEeecCCCHHHHHhhhhcc-
Q 029198 1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPG-------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~- 71 (197)
|||++.+|.++++.|++ .|++|++++|+.+........ .....+......+..+.+|++|++++.++++..
T Consensus 53 TGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~ 132 (405)
T 3zu3_A 53 IGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIK 132 (405)
T ss_dssp ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred eCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 79999999999999999 999999999976653211100 000112223356788999999999888877532
Q ss_pred ----CccEEEeccCCCc--------------------------------------cc-----------------hHHHHH
Q 029198 72 ----GFDVVYDINGREA--------------------------------------DE-----------------VEPILD 92 (197)
Q Consensus 72 ----~~d~vi~~a~~~~--------------------------------------~~-----------------~~~ll~ 92 (197)
++|++||+||... .. ...++.
T Consensus 133 ~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~ 212 (405)
T 3zu3_A 133 QDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQMWID 212 (405)
T ss_dssp HHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHH
T ss_pred HHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhHHHHHHH
Confidence 6999999988630 00 001222
Q ss_pred h-----CC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh-------hc-CCcEEEEccceeeCC
Q 029198 93 A-----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SK-GVNWTSLRPVYIYGP 157 (197)
Q Consensus 93 ~-----~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~-~~~~~i~r~~~i~g~ 157 (197)
+ +. +-.++|++||....... +......| .+|...+.+.+ .. |+++..+.||.+-.+
T Consensus 213 ~~~~~~m~~~gG~IVniSSi~~~~~~---------p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~ 283 (405)
T 3zu3_A 213 ALLDAGVLAEGAQTTAFTYLGEKITH---------DIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ 283 (405)
T ss_dssp HHHHHTCEEEEEEEEEEECCCCGGGT---------TTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred HHHHHhhhhCCcEEEEEeCchhhCcC---------CCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence 2 11 22589999996643111 00011346 88999887643 46 899999999998775
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.94 E-value=7.4e-10 Score=71.97 Aligned_cols=85 Identities=24% Similarity=0.190 Sum_probs=67.1
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
+|+ |++|+.+++.|++.| ++|++++|++++.... . ..++.++.+|+.+.+.+.++++ ++|+|||+
T Consensus 11 ~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~---------~--~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~ 76 (118)
T 3ic5_A 11 VGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVL---------N--RMGVATKQVDAKDEAGLAKALG--GFDAVISA 76 (118)
T ss_dssp ECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHH---------H--TTTCEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred ECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHH---------H--hCCCcEEEecCCCHHHHHHHHc--CCCEEEEC
Confidence 588 999999999999999 9999999986552211 1 2467889999999999999998 99999999
Q ss_pred cCCCccchHHHHHhCC--CCCcEE
Q 029198 80 NGREADEVEPILDALP--NLEQFI 101 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~--~~~~~v 101 (197)
++. ....++++.+. +++.+.
T Consensus 77 ~~~--~~~~~~~~~~~~~g~~~~~ 98 (118)
T 3ic5_A 77 APF--FLTPIIAKAAKAAGAHYFD 98 (118)
T ss_dssp SCG--GGHHHHHHHHHHTTCEEEC
T ss_pred CCc--hhhHHHHHHHHHhCCCEEE
Confidence 964 35577777776 554443
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=5.1e-09 Score=82.51 Aligned_cols=82 Identities=6% Similarity=-0.076 Sum_probs=60.0
Q ss_pred CCcccchHHH--HHHHHHHCCCeEEEEecCCCCccCCCC-------CCCchhhhhccCceEEEeecCCCHHHHHhhhhc-
Q 029198 1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQLP-------GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA- 70 (197)
Q Consensus 1 tGatG~vG~~--l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~- 70 (197)
|||++.+|.+ ++..|++.|++|++++|+......... .............+..+.+|+.|.++++++++.
T Consensus 66 TGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i 145 (418)
T 4eue_A 66 VGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYI 145 (418)
T ss_dssp ESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHH
T ss_pred ECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence 7999999999 999999999999999998665322110 000011122335688999999999988877653
Q ss_pred ----cCccEEEeccCC
Q 029198 71 ----KGFDVVYDINGR 82 (197)
Q Consensus 71 ----~~~d~vi~~a~~ 82 (197)
-++|++||+||.
T Consensus 146 ~~~~G~IDiLVnNAG~ 161 (418)
T 4eue_A 146 KDEFGKIDLFVYSLAA 161 (418)
T ss_dssp HHTTCCEEEEEECCCC
T ss_pred HHHcCCCCEEEECCcc
Confidence 269999999886
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.92 E-value=1.3e-09 Score=83.32 Aligned_cols=28 Identities=25% Similarity=0.201 Sum_probs=25.9
Q ss_pred CCc--ccchHHHHHHHHHHCCCeEEEEecC
Q 029198 1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRG 28 (197)
Q Consensus 1 tGa--tG~vG~~l~~~L~~~g~~V~~~~r~ 28 (197)
||| +|+||.+++++|+++|++|++++|+
T Consensus 15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~ 44 (319)
T 2ptg_A 15 AGVADSNGYGWAICKLLRAAGARVLVGTWP 44 (319)
T ss_dssp ECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred eCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence 687 8999999999999999999999874
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=3.9e-09 Score=80.52 Aligned_cols=145 Identities=14% Similarity=0.029 Sum_probs=83.6
Q ss_pred CCc--ccchHHHHHHHHHHCCCeEEEEecCCC-------CccCCCCCCCchhhhhcc--CceEEEeec------------
Q 029198 1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKA-------PIAQQLPGESDQEFAEFS--SKILHLKGD------------ 57 (197)
Q Consensus 1 tGa--tG~vG~~l~~~L~~~g~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~--~~~~~~~~d------------ 57 (197)
||| +|+||.+++++|+++|++|++++|++. .....+... .++.... ....++.+|
T Consensus 15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (315)
T 2o2s_A 15 AGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED--RKLPDGSLIEFAGVYPLDAAFDKPEDVPQD 92 (315)
T ss_dssp ECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH--HBCTTSCBCCCSCEEECCTTCSSTTSSCHH
T ss_pred eCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh--hhhhccccccccccccccccccccchhhhh
Confidence 688 899999999999999999999987531 000000000 0000000 012333333
Q ss_pred CCC--------HHHHHhhhhc-----cCccEEEeccCCCc---c-------------------chHHHHHhCC----CCC
Q 029198 58 RKD--------YDFVKSSLSA-----KGFDVVYDINGREA---D-------------------EVEPILDALP----NLE 98 (197)
Q Consensus 58 ~~~--------~~~l~~~~~~-----~~~d~vi~~a~~~~---~-------------------~~~~ll~~~~----~~~ 98 (197)
+.| ++++.++++. -++|++||+||... . ++..+++++. ...
T Consensus 93 v~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g 172 (315)
T 2o2s_A 93 IKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGG 172 (315)
T ss_dssp HHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEE
T ss_pred hhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC
Confidence 332 3344444432 17999999998531 0 0122333333 126
Q ss_pred cEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh--------hcCCcEEEEccceeeCC
Q 029198 99 QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE--------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 99 ~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~--------~~~~~~~i~r~~~i~g~ 157 (197)
+||++||...+.... .....| .+|...+.+.+ ..+++++.++||++..+
T Consensus 173 ~Iv~isS~~~~~~~~----------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~ 230 (315)
T 2o2s_A 173 SAVTLSYLAAERVVP----------GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSR 230 (315)
T ss_dssp EEEEEEEGGGTSCCT----------TCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCH
T ss_pred EEEEEecccccccCC----------CccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccch
Confidence 899999976542111 111246 89998887642 26899999999998764
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.86 E-value=5.2e-09 Score=82.15 Aligned_cols=149 Identities=13% Similarity=-0.018 Sum_probs=97.8
Q ss_pred CCcccchHHHHHHHHHH-CCCeEEEEecCCCCccCCCCC-------CCchhhhhccCceEEEeecCCCHHHHHhhhhc--
Q 029198 1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPG-------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-- 70 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-- 70 (197)
|||++.+|.+++..|++ .|++|++++|+.+........ .....+......+..+.+|++|+++++++++.
T Consensus 67 TGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~ 146 (422)
T 3s8m_A 67 IGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIK 146 (422)
T ss_dssp ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred ECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 79999999999999999 999999999987653321100 00011223345688899999999988776642
Q ss_pred --c--CccEEEeccCCC-----------------c----------------------c-c------------h---HHHH
Q 029198 71 --K--GFDVVYDINGRE-----------------A----------------------D-E------------V---EPIL 91 (197)
Q Consensus 71 --~--~~d~vi~~a~~~-----------------~----------------------~-~------------~---~~ll 91 (197)
. ++|++||+||.. . . . . ..++
T Consensus 147 ~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~ 226 (422)
T 3s8m_A 147 TEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWI 226 (422)
T ss_dssp HHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHH
T ss_pred HHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhHHHHHH
Confidence 2 689999998751 0 0 0 0 0122
Q ss_pred HhC-----C-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 92 DAL-----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 92 ~~~-----~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.++ . +-.++|++||....-.. +......| .+|...+.+.+ ..|+++..+.||.+-.+
T Consensus 227 ~a~~~~~m~~~gG~IVniSSi~g~~~~---------p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~ 297 (422)
T 3s8m_A 227 DALEGAGVLADGARSVAFSYIGTEITW---------PIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQ 297 (422)
T ss_dssp HHHHHTTCEEEEEEEEEEEECCCGGGH---------HHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred HHHHHHHHhhCCCEEEEEeCchhhccC---------CCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcCh
Confidence 221 1 23589999996542110 00011345 88999887643 46899999999999887
Q ss_pred C
Q 029198 158 L 158 (197)
Q Consensus 158 ~ 158 (197)
.
T Consensus 298 ~ 298 (422)
T 3s8m_A 298 A 298 (422)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.85 E-value=2.1e-09 Score=94.66 Aligned_cols=142 Identities=12% Similarity=0.112 Sum_probs=91.8
Q ss_pred CCcccc-hHHHHHHHHHHCCCeEEEEe-cCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc---c----
Q 029198 1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---K---- 71 (197)
Q Consensus 1 tGatG~-vG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~---~---- 71 (197)
|||+|. ||.++++.|++.|++|++++ |+.+......... ...+.....++.++.+|+.|.+++.++++. .
T Consensus 482 TGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL-~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~~ 560 (1688)
T 2pff_A 482 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSI-YAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNG 560 (1688)
T ss_dssp CSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHT-TTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCTTSS
T ss_pred ECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHH-HHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhcccc
Confidence 799998 99999999999999999984 5544322110000 000011134688999999999988887752 2
Q ss_pred ----CccEEEeccCCCccc-----------------------hHHHHH------hCC--CCCcEEEEecceecccCCCCC
Q 029198 72 ----GFDVVYDINGREADE-----------------------VEPILD------ALP--NLEQFIYCSSAGVYLKSDLLP 116 (197)
Q Consensus 72 ----~~d~vi~~a~~~~~~-----------------------~~~ll~------~~~--~~~~~v~~Ss~~vyg~~~~~~ 116 (197)
++|+|||+||..... ...++. .++ +..+||++||......
T Consensus 561 GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G----- 635 (1688)
T 2pff_A 561 GLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG----- 635 (1688)
T ss_dssp SCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS-----
T ss_pred ccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC-----
Confidence 599999999864211 011222 222 2258999998543211
Q ss_pred CCCCCCCCCCCcc-hhhhhHHHHH-h----h--cCCcEEEEccceeeC
Q 029198 117 HCETDTVDPKSRH-KGKLNTESVL-E----S--KGVNWTSLRPVYIYG 156 (197)
Q Consensus 117 ~~e~~~~~~~~~~-~~k~~~e~~~-~----~--~~~~~~i~r~~~i~g 156 (197)
....| .+|...+.+. + . ..++++.+.||++.+
T Consensus 636 --------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 636 --------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp --------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred --------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 12346 8999998873 1 1 128889999999984
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.82 E-value=6.3e-09 Score=85.97 Aligned_cols=134 Identities=13% Similarity=0.115 Sum_probs=88.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecC-CCHHHHH-hhhhc-cCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR-KDYDFVK-SSLSA-KGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~l~-~~~~~-~~~d~vi 77 (197)
|||++.||.+++++|+++|++|++.+|.... .. ..++.+....+..+.+|+ .+.+.+. ++.+. -++|++|
T Consensus 328 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~--~~-----~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV 400 (604)
T 2et6_A 328 TGAGAGLGKEYAKWFAKYGAKVVVNDFKDAT--KT-----VDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV 400 (604)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEECSSCCH--HH-----HHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred ECcchHHHHHHHHHHHHCCCEEEEEeCccHH--HH-----HHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence 7999999999999999999999998863211 00 011222234566777888 5544332 22222 2799999
Q ss_pred eccCCCccc------------------------hHHHHHhCC--CCCcEEEEeccee-cccCCCCCCCCCCCCCCCCcc-
Q 029198 78 DINGREADE------------------------VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 78 ~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~~~- 129 (197)
|+||..... ++.++..++ +..+||++||... ++.. ....|
T Consensus 401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~------------~~~~Y~ 468 (604)
T 2et6_A 401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNF------------GQANYS 468 (604)
T ss_dssp ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT------------TBHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC------------CChhHH
Confidence 999974211 344556664 4579999999653 2211 12346
Q ss_pred hhhhhHHHHH-------hhcCCcEEEEccce
Q 029198 130 KGKLNTESVL-------ESKGVNWTSLRPVY 153 (197)
Q Consensus 130 ~~k~~~e~~~-------~~~~~~~~i~r~~~ 153 (197)
.+|.....+. ...|+++..+.||.
T Consensus 469 asKaal~~lt~~la~El~~~gIrVn~v~PG~ 499 (604)
T 2et6_A 469 SSKAGILGLSKTMAIEGAKNNIKVNIVAPHA 499 (604)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEcCCC
Confidence 8899887764 34789999999994
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=4.8e-09 Score=94.66 Aligned_cols=142 Identities=12% Similarity=0.080 Sum_probs=92.3
Q ss_pred CCcccc-hHHHHHHHHHHCCCeEEEEe-cCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc---c----
Q 029198 1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---K---- 71 (197)
Q Consensus 1 tGatG~-vG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~---~---- 71 (197)
|||+|. ||.++++.|++.|++|++++ |+.+........ ....+.....++.++.+|+.|.+++.++++. .
T Consensus 681 TGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~e-L~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~ 759 (1887)
T 2uv8_A 681 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQS-IYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNG 759 (1887)
T ss_dssp ESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-HHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTTT
T ss_pred ECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHH-HHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhcccc
Confidence 799998 99999999999999999985 544332110000 0000001134688999999999999887752 2
Q ss_pred ----CccEEEeccCCCccc-----------------------hHHHHHhC------C--CCCcEEEEecceecccCCCCC
Q 029198 72 ----GFDVVYDINGREADE-----------------------VEPILDAL------P--NLEQFIYCSSAGVYLKSDLLP 116 (197)
Q Consensus 72 ----~~d~vi~~a~~~~~~-----------------------~~~ll~~~------~--~~~~~v~~Ss~~vyg~~~~~~ 116 (197)
++|+|||+||....+ ...++.++ + +..+||++||...+..
T Consensus 760 G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g----- 834 (1887)
T 2uv8_A 760 GLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG----- 834 (1887)
T ss_dssp SCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS-----
T ss_pred ccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC-----
Confidence 599999999864221 01122222 2 2258999999653211
Q ss_pred CCCCCCCCCCCcc-hhhhhHHHH-Hh----hc--CCcEEEEccceeeC
Q 029198 117 HCETDTVDPKSRH-KGKLNTESV-LE----SK--GVNWTSLRPVYIYG 156 (197)
Q Consensus 117 ~~e~~~~~~~~~~-~~k~~~e~~-~~----~~--~~~~~i~r~~~i~g 156 (197)
....| .+|...+.+ .+ .. .++++.+.||++.+
T Consensus 835 --------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 835 --------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp --------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 12346 899998887 21 11 28999999999984
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=7.9e-09 Score=93.17 Aligned_cols=143 Identities=11% Similarity=0.060 Sum_probs=92.5
Q ss_pred CCcccc-hHHHHHHHHHHCCCeEEEEecC-CCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc---c----
Q 029198 1 MGGTRF-IGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---K---- 71 (197)
Q Consensus 1 tGatG~-vG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~---~---- 71 (197)
|||+|. ||.+++++|++.|++|+++++. .+........ ....+.....++.++.+|+.|.+++.++++. .
T Consensus 658 TGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~e-L~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~ 736 (1878)
T 2uv9_A 658 TGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQG-IYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNGL 736 (1878)
T ss_dssp ESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-HHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSSC
T ss_pred ECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHH-HHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhccc
Confidence 799999 9999999999999999999654 3221100000 0000111134688999999999999888752 2
Q ss_pred --CccEEEeccCCCccc-----------------------hHHHH------HhCC--CCCcEEEEecceecccCCCCCCC
Q 029198 72 --GFDVVYDINGREADE-----------------------VEPIL------DALP--NLEQFIYCSSAGVYLKSDLLPHC 118 (197)
Q Consensus 72 --~~d~vi~~a~~~~~~-----------------------~~~ll------~~~~--~~~~~v~~Ss~~vyg~~~~~~~~ 118 (197)
++|+|||+||....+ ...++ ..+. +..+||++||...+..
T Consensus 737 G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g------- 809 (1878)
T 2uv9_A 737 GWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG------- 809 (1878)
T ss_dssp CCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS-------
T ss_pred CCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC-------
Confidence 599999999864221 00111 2232 2368999999653211
Q ss_pred CCCCCCCCCcc-hhhhhHHHHHhh-------cCCcEEEEccceee-CC
Q 029198 119 ETDTVDPKSRH-KGKLNTESVLES-------KGVNWTSLRPVYIY-GP 157 (197)
Q Consensus 119 e~~~~~~~~~~-~~k~~~e~~~~~-------~~~~~~i~r~~~i~-g~ 157 (197)
....| .+|...+.+.+. ..++++.+.||++- .+
T Consensus 810 ------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~ 851 (1878)
T 2uv9_A 810 ------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTG 851 (1878)
T ss_dssp ------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTT
T ss_pred ------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCc
Confidence 12346 899988876421 13899999999988 44
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.70 E-value=3.4e-08 Score=81.65 Aligned_cols=136 Identities=13% Similarity=0.078 Sum_probs=83.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCcc-----CCCCCCCchhhhhccCceEEEeecCCCHHHHHhhh----hc-
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-----QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL----SA- 70 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~----~~- 70 (197)
|||++.||.++++.|+++|++|++.+|+..... ..... ...++....... .+|+.|.+++++++ +.
T Consensus 14 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~-~~~~i~~~g~~~---~~d~~d~~~~~~~v~~~~~~~ 89 (604)
T 2et6_A 14 TGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADV-VVDEIVKNGGVA---VADYNNVLDGDKIVETAVKNF 89 (604)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHH-HHHHHHHTTCEE---EEECCCTTCHHHHHHHHHHHH
T ss_pred eCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHH-HHHHHHhcCCeE---EEEcCCHHHHHHHHHHHHHHc
Confidence 899999999999999999999999988642100 00000 001111111222 24666654333332 22
Q ss_pred cCccEEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEeccee-cccCCCCCCCCCCCC
Q 029198 71 KGFDVVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTV 123 (197)
Q Consensus 71 ~~~d~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~ 123 (197)
-++|++||+||..... ++.++..++ +..+||++||... ++..
T Consensus 90 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~----------- 158 (604)
T 2et6_A 90 GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF----------- 158 (604)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC-----------
Confidence 2799999999964211 344556665 5579999999653 3321
Q ss_pred CCCCcc-hhhhhHHHHH-------hhcCCcEEEEccc
Q 029198 124 DPKSRH-KGKLNTESVL-------ESKGVNWTSLRPV 152 (197)
Q Consensus 124 ~~~~~~-~~k~~~e~~~-------~~~~~~~~i~r~~ 152 (197)
....| .+|.....+. ..+|+++..+.|+
T Consensus 159 -~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 159 -GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp -TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred -CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 12346 8899888764 3478999999997
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=5e-08 Score=65.39 Aligned_cols=91 Identities=13% Similarity=0.109 Sum_probs=64.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhh-hhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~~~d~vi~~ 79 (197)
+|+ |.+|..+++.|.+.|++|++++++++.... +. ......+.+|..+.+.+.++ +. ++|+||++
T Consensus 12 ~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~-~~----------~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~ 77 (144)
T 2hmt_A 12 IGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA-YA----------SYATHAVIANATEENELLSLGIR--NFEYVIVA 77 (144)
T ss_dssp ECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT-TT----------TTCSEEEECCTTCHHHHHTTTGG--GCSEEEEC
T ss_pred ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----------HhCCEEEEeCCCCHHHHHhcCCC--CCCEEEEC
Confidence 476 999999999999999999999997654221 11 12346678899998888776 55 89999999
Q ss_pred cCCCccchHHHHHhCC--CCCcEEEEec
Q 029198 80 NGREADEVEPILDALP--NLEQFIYCSS 105 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~--~~~~~v~~Ss 105 (197)
++........+...++ +.++++..++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~ 105 (144)
T 2hmt_A 78 IGANIQASTLTTLLLKELDIPNIWVKAQ 105 (144)
T ss_dssp CCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCchHHHHHHHHHHHHcCCCeEEEEeC
Confidence 8754222334445454 5667776654
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=2.3e-07 Score=87.16 Aligned_cols=142 Identities=18% Similarity=0.177 Sum_probs=95.7
Q ss_pred CCcccchHHHHHHHHHHCCCe-EEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~----~~~d~ 75 (197)
|||+|.+|.++++.|+++|++ |++++|+..+...... ....+.....++.++.+|+.|.++++++++. -.+|+
T Consensus 1890 TGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~--~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~id~ 1967 (2512)
T 2vz8_A 1890 TGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQAR--QVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPVGG 1967 (2512)
T ss_dssp ESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHH--HHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCEEE
T ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHH--HHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCCcE
Confidence 799999999999999999986 8888887654210000 0011122234688899999999998887753 26999
Q ss_pred EEeccCCCcc--------------------chHHH----HHhCCCCCcEEEEecceec-ccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREAD--------------------EVEPI----LDALPNLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~--------------------~~~~l----l~~~~~~~~~v~~Ss~~vy-g~~~~~~~~e~~~~~~~~~~- 129 (197)
|||+||.... ++.++ ...+....+||++||.... |.. ....|
T Consensus 1968 lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~------------g~~~Y~ 2035 (2512)
T 2vz8_A 1968 VFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNA------------GQANYG 2035 (2512)
T ss_dssp EEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCT------------TCHHHH
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCC------------CcHHHH
Confidence 9999986321 12222 2334444799999996543 211 12346
Q ss_pred hhhhhHHHHHh---hcCCcEEEEccceeeC
Q 029198 130 KGKLNTESVLE---SKGVNWTSLRPVYIYG 156 (197)
Q Consensus 130 ~~k~~~e~~~~---~~~~~~~i~r~~~i~g 156 (197)
.+|...+.+.+ +.|++...+..+.+-+
T Consensus 2036 aaKaal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2036 FANSAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred HHHHHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence 88999888764 5788888888876644
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=1.1e-07 Score=71.59 Aligned_cols=75 Identities=19% Similarity=0.210 Sum_probs=57.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+|.+|.+++..|++.|++|++++|+.++..... .++.. ..++.++.+|+.+.+++.++++ .+|+|||++
T Consensus 125 tGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~-----~~~~~-~~~~~~~~~D~~~~~~~~~~~~--~~DvlVn~a 196 (287)
T 1lu9_A 125 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA-----DSVNK-RFKVNVTAAETADDASRAEAVK--GAHFVFTAG 196 (287)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHH-HHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHH-----HHHHh-cCCcEEEEecCCCHHHHHHHHH--hCCEEEECC
Confidence 699999999999999999999999999765422110 01111 1246778899999999999998 799999999
Q ss_pred CCC
Q 029198 81 GRE 83 (197)
Q Consensus 81 ~~~ 83 (197)
+..
T Consensus 197 g~g 199 (287)
T 1lu9_A 197 AIG 199 (287)
T ss_dssp CTT
T ss_pred Ccc
Confidence 754
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.35 E-value=3.8e-07 Score=61.08 Aligned_cols=89 Identities=24% Similarity=0.197 Sum_probs=61.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+++++.|.+.|++|++++++++.... +. ..++.++.+|..+++.+.++-- .++|+||.+.+
T Consensus 13 G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~---------~~--~~~~~~~~gd~~~~~~l~~~~~-~~~d~vi~~~~- 79 (141)
T 3llv_A 13 GSEAAGVGLVRELTAAGKKVLAVDKSKEKIEL---------LE--DEGFDAVIADPTDESFYRSLDL-EGVSAVLITGS- 79 (141)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESCHHHHHH---------HH--HTTCEEEECCTTCHHHHHHSCC-TTCSEEEECCS-
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEECCHHHHHH---------HH--HCCCcEEECCCCCHHHHHhCCc-ccCCEEEEecC-
Confidence 34999999999999999999999997654221 11 1357889999999998887632 28999998876
Q ss_pred CccchHHHHHhCC--CCCcEEEEe
Q 029198 83 EADEVEPILDALP--NLEQFIYCS 104 (197)
Q Consensus 83 ~~~~~~~ll~~~~--~~~~~v~~S 104 (197)
.......+...++ +..+++...
T Consensus 80 ~~~~n~~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 80 DDEFNLKILKALRSVSDVYAIVRV 103 (141)
T ss_dssp CHHHHHHHHHHHHHHCCCCEEEEE
T ss_pred CHHHHHHHHHHHHHhCCceEEEEE
Confidence 2222333444444 555555433
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.23 E-value=2.3e-06 Score=65.53 Aligned_cols=94 Identities=16% Similarity=0.250 Sum_probs=62.2
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||+|++|+.++..|+..| ++|++++++++... ..++........ +.+ +.+.+++.++++ ++|+|||
T Consensus 14 iGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~-------~~dL~~~~~~~~-v~~-~~~t~d~~~al~--gaDvVi~ 82 (326)
T 1smk_A 14 LGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV-------TADISHMDTGAV-VRG-FLGQQQLEAALT--GMDLIIV 82 (326)
T ss_dssp ETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHH-------HHHHHTSCSSCE-EEE-EESHHHHHHHHT--TCSEEEE
T ss_pred ECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhH-------HHHhhcccccce-EEE-EeCCCCHHHHcC--CCCEEEE
Confidence 5899999999999999998 89999998654100 001111111111 112 334567778888 9999999
Q ss_pred ccCCCc--------------cchHHHHHhCC--CCCcEEEEec
Q 029198 79 INGREA--------------DEVEPILDALP--NLEQFIYCSS 105 (197)
Q Consensus 79 ~a~~~~--------------~~~~~ll~~~~--~~~~~v~~Ss 105 (197)
+++... ..++++++.+. +.+.+++++|
T Consensus 83 ~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S 125 (326)
T 1smk_A 83 PAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS 125 (326)
T ss_dssp CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred cCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 998642 22566777766 6677777776
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.23 E-value=2.7e-06 Score=56.51 Aligned_cols=90 Identities=17% Similarity=0.201 Sum_probs=60.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhh-hhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~~~d~vi~~ 79 (197)
+|+ |.+|..+++.|.+.|++|++++|+++.... +.+ ..++.++.+|..+.+.+.++ +. ++|+||++
T Consensus 10 iG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~---------~~~-~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~ 76 (140)
T 1lss_A 10 AGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKK---------ASA-EIDALVINGDCTKIKTLEDAGIE--DADMYIAV 76 (140)
T ss_dssp ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHH-HCSSEEEESCTTSHHHHHHTTTT--TCSEEEEC
T ss_pred ECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH---------HHH-hcCcEEEEcCCCCHHHHHHcCcc--cCCEEEEe
Confidence 354 999999999999999999999997554211 111 12466788899988877655 45 89999999
Q ss_pred cCCCccchHHHHHhCC--CCCcEEEEe
Q 029198 80 NGREADEVEPILDALP--NLEQFIYCS 104 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~--~~~~~v~~S 104 (197)
.... .....+...++ +..+++..+
T Consensus 77 ~~~~-~~~~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 77 TGKE-EVNLMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp CSCH-HHHHHHHHHHHHTTCCCEEEEC
T ss_pred eCCc-hHHHHHHHHHHHcCCCEEEEEe
Confidence 7542 22223444444 556776543
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.22 E-value=1.7e-06 Score=69.10 Aligned_cols=71 Identities=15% Similarity=0.137 Sum_probs=55.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+| +|++|+++++.|++.|++|++.+|+.++...... ..+++..+.+|+.|.+++.++++ ++|+|||++
T Consensus 9 iG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~---------~~~~~~~~~~Dv~d~~~l~~~l~--~~DvVIn~a 76 (450)
T 1ff9_A 9 LG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA---------GVQHSTPISLDVNDDAALDAEVA--KHDLVISLI 76 (450)
T ss_dssp EC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTT---------TCTTEEEEECCTTCHHHHHHHHT--TSSEEEECC
T ss_pred EC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHH---------hcCCceEEEeecCCHHHHHHHHc--CCcEEEECC
Confidence 46 7999999999999999999999998654322111 11246788899999999999888 899999999
Q ss_pred CCC
Q 029198 81 GRE 83 (197)
Q Consensus 81 ~~~ 83 (197)
+..
T Consensus 77 ~~~ 79 (450)
T 1ff9_A 77 PYT 79 (450)
T ss_dssp C--
T ss_pred ccc
Confidence 864
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.14 E-value=1.4e-06 Score=68.61 Aligned_cols=96 Identities=13% Similarity=0.078 Sum_probs=68.0
Q ss_pred CCcccchHHHHHHHHHHCC---CeEEEEecCCCCccCCCCCCCchhhhhc-cCceEEEeecCCCHHHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~l~~~~~~~~~d~v 76 (197)
+|| |++|+.+++.|++.| .+|++.+|+.++..... ..+... ..++..+.+|+.|.+++.+++++.++|+|
T Consensus 7 iGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la-----~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV 80 (405)
T 4ina_A 7 IGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIA-----QSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV 80 (405)
T ss_dssp ECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHH-----HHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred ECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHH-----HHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence 477 999999999999998 38999999876532110 001100 13588899999999999999985569999
Q ss_pred EeccCCCccchHHHHHhCC-CCCcEEEEe
Q 029198 77 YDINGREADEVEPILDALP-NLEQFIYCS 104 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~-~~~~~v~~S 104 (197)
||+++... ...+++++. ...+++-++
T Consensus 81 in~ag~~~--~~~v~~a~l~~g~~vvD~a 107 (405)
T 4ina_A 81 LNIALPYQ--DLTIMEACLRTGVPYLDTA 107 (405)
T ss_dssp EECSCGGG--HHHHHHHHHHHTCCEEESS
T ss_pred EECCCccc--ChHHHHHHHHhCCCEEEec
Confidence 99998642 356666665 334555443
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=2.1e-05 Score=53.42 Aligned_cols=89 Identities=17% Similarity=0.261 Sum_probs=60.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhh-hhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~~~d~vi~~a~ 81 (197)
|+|.+|..+++.|.+.|++|++++|+++....... ..+...+.+|..+++.+.++ +. ++|+||.+.+
T Consensus 26 G~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~~--~ad~Vi~~~~ 93 (155)
T 2g1u_A 26 GCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGME--KADMVFAFTN 93 (155)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTGG--GCSEEEECSS
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCcc--cCCEEEEEeC
Confidence 35999999999999999999999998766332110 12456777888888877765 55 8999998876
Q ss_pred CCccchHHHHHhCC---CCCcEEEEe
Q 029198 82 READEVEPILDALP---NLEQFIYCS 104 (197)
Q Consensus 82 ~~~~~~~~ll~~~~---~~~~~v~~S 104 (197)
.. .....+...++ +..+++...
T Consensus 94 ~~-~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 94 DD-STNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp CH-HHHHHHHHHHHHTSCCSEEEEEC
T ss_pred Cc-HHHHHHHHHHHHHCCCCeEEEEE
Confidence 42 22333334433 444555444
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.05 E-value=1e-06 Score=67.55 Aligned_cols=95 Identities=9% Similarity=0.007 Sum_probs=60.6
Q ss_pred CCcccchHHHHHHHHHHCCC-------eEEEEecC----CCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhh
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRG----KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS 69 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 69 (197)
|||+|++|++++..|+..|. +|+++++. +++.... ..++.... ..+ ..++...+++.++++
T Consensus 11 iGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~-----~~dl~~~~--~~~-~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 11 TGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGV-----MMEIDDCA--FPL-LAGMTAHADPMTAFK 82 (329)
T ss_dssp SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHH-----HHHHHTTT--CTT-EEEEEEESSHHHHTT
T ss_pred ECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhh-----HHHHhhhc--ccc-cCcEEEecCcHHHhC
Confidence 79999999999999999885 89999887 3211100 00011100 011 134444455677787
Q ss_pred ccCccEEEeccCCCcc--------------chHHHHHhCC--C-CC-cEEEEec
Q 029198 70 AKGFDVVYDINGREAD--------------EVEPILDALP--N-LE-QFIYCSS 105 (197)
Q Consensus 70 ~~~~d~vi~~a~~~~~--------------~~~~ll~~~~--~-~~-~~v~~Ss 105 (197)
++|+|||+|+.... .++++++.+. . .+ +|+++|.
T Consensus 83 --~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 83 --DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp --TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred --CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 99999999986532 2556666666 3 44 7888886
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.97 E-value=9.5e-06 Score=63.02 Aligned_cols=86 Identities=15% Similarity=0.089 Sum_probs=65.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+|| |++|+.+++.|.+ .++|.+.+++.++... ....+..+..|..|.+++.++++ ++|+||+++
T Consensus 22 lGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~------------~~~~~~~~~~d~~d~~~l~~~~~--~~DvVi~~~ 85 (365)
T 3abi_A 22 LGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEK------------VKEFATPLKVDASNFDKLVEVMK--EFELVIGAL 85 (365)
T ss_dssp ECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHH------------HTTTSEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred ECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHH------------HhccCCcEEEecCCHHHHHHHHh--CCCEEEEec
Confidence 477 9999999998854 5899999987655321 12456778899999999999998 899999998
Q ss_pred CCCccchHHHHHhCC-CCCcEEEEe
Q 029198 81 GREADEVEPILDALP-NLEQFIYCS 104 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~-~~~~~v~~S 104 (197)
+.. ....++++|. ..++++-+|
T Consensus 86 p~~--~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 86 PGF--LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp CGG--GHHHHHHHHHHHTCEEEECC
T ss_pred CCc--ccchHHHHHHhcCcceEeee
Confidence 764 2346777776 445777665
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.88 E-value=1.7e-05 Score=63.53 Aligned_cols=70 Identities=21% Similarity=0.161 Sum_probs=55.3
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
+|| |++|++++..|++. |++|++.+|+.++... +.+. .++..+.+|+.|.+++.++++ ++|+|||+
T Consensus 29 iGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~---------la~~-~~~~~~~~D~~d~~~l~~~l~--~~DvVIn~ 95 (467)
T 2axq_A 29 LGS-GFVAQPVIDTLAANDDINVTVACRTLANAQA---------LAKP-SGSKAISLDVTDDSALDKVLA--DNDVVISL 95 (467)
T ss_dssp ECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHH---------HHGG-GTCEEEECCTTCHHHHHHHHH--TSSEEEEC
T ss_pred ECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHH---------HHHh-cCCcEEEEecCCHHHHHHHHc--CCCEEEEC
Confidence 476 99999999999998 7899999998654221 1111 246677899999999999888 99999999
Q ss_pred cCCC
Q 029198 80 NGRE 83 (197)
Q Consensus 80 a~~~ 83 (197)
++..
T Consensus 96 tp~~ 99 (467)
T 2axq_A 96 IPYT 99 (467)
T ss_dssp SCGG
T ss_pred Cchh
Confidence 8764
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.88 E-value=1.6e-05 Score=53.81 Aligned_cols=70 Identities=13% Similarity=0.247 Sum_probs=53.2
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhh-hhccCccEEEec
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI 79 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~-~~~~~~d~vi~~ 79 (197)
| .|.+|+.+++.|.+.|++|++++++++.... .+.+ ...++.++.+|..+++.+.++ ++ ++|.||.+
T Consensus 10 G-~G~vG~~la~~L~~~g~~V~vid~~~~~~~~--------~~~~~~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~ 78 (153)
T 1id1_A 10 G-HSILAINTILQLNQRGQNVTVISNLPEDDIK--------QLEQRLGDNADVIPGDSNDSSVLKKAGID--RCRAILAL 78 (153)
T ss_dssp C-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHH--------HHHHHHCTTCEEEESCTTSHHHHHHHTTT--TCSEEEEC
T ss_pred C-CCHHHHHHHHHHHHCCCCEEEEECCChHHHH--------HHHHhhcCCCeEEEcCCCCHHHHHHcChh--hCCEEEEe
Confidence 5 5999999999999999999999997421100 0010 123688999999999999887 66 89999987
Q ss_pred cCC
Q 029198 80 NGR 82 (197)
Q Consensus 80 a~~ 82 (197)
.+.
T Consensus 79 ~~~ 81 (153)
T 1id1_A 79 SDN 81 (153)
T ss_dssp SSC
T ss_pred cCC
Confidence 754
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.86 E-value=1.7e-05 Score=56.05 Aligned_cols=93 Identities=16% Similarity=0.172 Sum_probs=61.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHH---HhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV---KSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l---~~~~~~~~~d~vi 77 (197)
+||+|.+|..+++.+...|++|++++|+++.... ..+. +... ..|..+.+.. .+.....++|+||
T Consensus 45 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~---------~~~~--g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi 112 (198)
T 1pqw_A 45 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM---------LSRL--GVEY-VGDSRSVDFADEILELTDGYGVDVVL 112 (198)
T ss_dssp TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH---------HHTT--CCSE-EEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred eeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHHc--CCCE-EeeCCcHHHHHHHHHHhCCCCCeEEE
Confidence 6999999999999999999999999997654211 0111 1111 2366554433 3333333699999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEecce
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~~ 107 (197)
++++. ......++.++...+++.+++..
T Consensus 113 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~~ 140 (198)
T 1pqw_A 113 NSLAG--EAIQRGVQILAPGGRFIELGKKD 140 (198)
T ss_dssp ECCCT--HHHHHHHHTEEEEEEEEECSCGG
T ss_pred ECCch--HHHHHHHHHhccCCEEEEEcCCC
Confidence 99873 45667777777335888877643
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.84 E-value=5.7e-05 Score=54.65 Aligned_cols=66 Identities=14% Similarity=0.190 Sum_probs=45.2
Q ss_pred ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc--cCccEEEeccC
Q 029198 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDING 81 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~--~~~d~vi~~a~ 81 (197)
+|.+|.++++.|+++|++|++++|...... .. ..++..+ +....+++.+++.. .++|++||+|+
T Consensus 28 SG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-~~-----------~~~~~~~--~v~s~~em~~~v~~~~~~~Dili~aAA 93 (232)
T 2gk4_A 28 TGHLGKIITETLLSAGYEVCLITTKRALKP-EP-----------HPNLSIR--EITNTKDLLIEMQERVQDYQVLIHSMA 93 (232)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEECTTSCCC-CC-----------CTTEEEE--ECCSHHHHHHHHHHHGGGCSEEEECSB
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCccccc-cC-----------CCCeEEE--EHhHHHHHHHHHHHhcCCCCEEEEcCc
Confidence 899999999999999999999999754211 00 0234443 45555444433321 27999999998
Q ss_pred CC
Q 029198 82 RE 83 (197)
Q Consensus 82 ~~ 83 (197)
..
T Consensus 94 vs 95 (232)
T 2gk4_A 94 VS 95 (232)
T ss_dssp CC
T ss_pred cc
Confidence 75
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.77 E-value=3.1e-06 Score=64.07 Aligned_cols=91 Identities=18% Similarity=0.128 Sum_probs=56.9
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEec--CCCCccCCCCCCCchhhhhc---cCceEEEeecCCCHHHHHhhhhccCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSAKGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~l~~~~~~~~~ 73 (197)
|||+|++|++++..|+..|. ++.++++ .+++.... ..++... ...+.+... + .++++ ++
T Consensus 6 iGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~-----~~dl~~~~~~~~~~~v~~~---~----~~a~~--~a 71 (303)
T 1o6z_A 6 VGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQ-----AADTNHGIAYDSNTRVRQG---G----YEDTA--GS 71 (303)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHH-----HHHHHHHHTTTCCCEEEEC---C----GGGGT--TC
T ss_pred ECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHH-----HHHHHHHHhhCCCcEEEeC---C----HHHhC--CC
Confidence 68999999999999998875 7888887 43221100 0111111 123333321 2 34466 99
Q ss_pred cEEEeccCCCc--------------cchHHHHHhCC--CCCcEEEEec
Q 029198 74 DVVYDINGREA--------------DEVEPILDALP--NLEQFIYCSS 105 (197)
Q Consensus 74 d~vi~~a~~~~--------------~~~~~ll~~~~--~~~~~v~~Ss 105 (197)
|+|||+++... ..++++++.++ +.+.+++++|
T Consensus 72 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S 119 (303)
T 1o6z_A 72 DVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119 (303)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 99999998642 13566777766 5667777776
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=7e-05 Score=54.02 Aligned_cols=64 Identities=13% Similarity=0.137 Sum_probs=46.0
Q ss_pred ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc--cCccEEEeccC
Q 029198 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDING 81 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~--~~~d~vi~~a~ 81 (197)
||.+|.++++.|+++|++|+++++.... . .. .++. ..|+.+.+++.+.+.. .++|++||+||
T Consensus 33 Sg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~--~~-----------~g~~--~~dv~~~~~~~~~v~~~~~~~Dili~~Aa 96 (226)
T 1u7z_A 33 SGKMGFAIAAAAARRGANVTLVSGPVSL-P--TP-----------PFVK--RVDVMTALEMEAAVNASVQQQNIFIGCAA 96 (226)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECSCCC-C--CC-----------TTEE--EEECCSHHHHHHHHHHHGGGCSEEEECCB
T ss_pred ccHHHHHHHHHHHHCCCEEEEEECCccc-c--cC-----------CCCe--EEccCcHHHHHHHHHHhcCCCCEEEECCc
Confidence 7999999999999999999999886521 1 00 1222 4677877665544321 27999999999
Q ss_pred CC
Q 029198 82 RE 83 (197)
Q Consensus 82 ~~ 83 (197)
..
T Consensus 97 v~ 98 (226)
T 1u7z_A 97 VA 98 (226)
T ss_dssp CC
T ss_pred cc
Confidence 75
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=1.5e-05 Score=60.63 Aligned_cols=93 Identities=17% Similarity=0.163 Sum_probs=57.9
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEec--CCCCccCCCCCCCchhhhhc---c-CceEEEeecCCCHHHHHhhhhccC
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFAEF---S-SKILHLKGDRKDYDFVKSSLSAKG 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~d~~~~~~l~~~~~~~~ 72 (197)
|||+|++|++++..|+..|. ++.++++ +++..... ..++... . ..+.+...+ +++.++++ +
T Consensus 6 ~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~-----~~dl~~~~~~~~~~~~i~~~~----d~l~~al~--g 74 (313)
T 1hye_A 6 IGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGL-----REDIYDALAGTRSDANIYVES----DENLRIID--E 74 (313)
T ss_dssp ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHH-----HHHHHHHHTTSCCCCEEEEEE----TTCGGGGT--T
T ss_pred ECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHH-----HHHHHHhHHhcCCCeEEEeCC----cchHHHhC--C
Confidence 69999999999999998884 7888887 43211000 0001110 0 122222221 22456677 9
Q ss_pred ccEEEeccCCCc--------------cchHHHHHhCC--CCCcEEEEec
Q 029198 73 FDVVYDINGREA--------------DEVEPILDALP--NLEQFIYCSS 105 (197)
Q Consensus 73 ~d~vi~~a~~~~--------------~~~~~ll~~~~--~~~~~v~~Ss 105 (197)
+|+|||+|+... ..+++++++++ + +.+++++|
T Consensus 75 aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~S 122 (313)
T 1hye_A 75 SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT 122 (313)
T ss_dssp CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence 999999998642 12667777777 7 77777777
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.70 E-value=2.2e-05 Score=52.37 Aligned_cols=67 Identities=9% Similarity=0.162 Sum_probs=53.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhh-hhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~~~d~vi~~a~ 81 (197)
|.|.+|..+++.|.+.|++|++++++++.... +. ..++..+.+|..+++.+.++ +. ++|+||-+..
T Consensus 14 G~G~~G~~la~~L~~~g~~v~vid~~~~~~~~---------~~--~~g~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~ 80 (140)
T 3fwz_A 14 GYGRVGSLLGEKLLASDIPLVVIETSRTRVDE---------LR--ERGVRAVLGNAANEEIMQLAHLE--CAKWLILTIP 80 (140)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESCHHHHHH---------HH--HTTCEEEESCTTSHHHHHHTTGG--GCSEEEECCS
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEECCHHHHHH---------HH--HcCCCEEECCCCCHHHHHhcCcc--cCCEEEEECC
Confidence 46999999999999999999999998765321 11 14678899999999988876 34 8999987765
Q ss_pred C
Q 029198 82 R 82 (197)
Q Consensus 82 ~ 82 (197)
.
T Consensus 81 ~ 81 (140)
T 3fwz_A 81 N 81 (140)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.66 E-value=6.2e-05 Score=54.05 Aligned_cols=68 Identities=21% Similarity=0.322 Sum_probs=53.4
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhh-hhccCccEEEecc
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN 80 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~~~d~vi~~a 80 (197)
| .|.+|+++++.|.+.|++|++++++++.... +. ...++.++.+|..+++.+.++ ++ ++|+||-+.
T Consensus 7 G-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~---------l~-~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~ 73 (218)
T 3l4b_C 7 G-GETTAYYLARSMLSRKYGVVIINKDRELCEE---------FA-KKLKATIIHGDGSHKEILRDAEVS--KNDVVVILT 73 (218)
T ss_dssp C-CHHHHHHHHHHHHHTTCCEEEEESCHHHHHH---------HH-HHSSSEEEESCTTSHHHHHHHTCC--TTCEEEECC
T ss_pred C-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHH---------HH-HHcCCeEEEcCCCCHHHHHhcCcc--cCCEEEEec
Confidence 5 5999999999999999999999998665321 11 113578899999999998877 45 899999776
Q ss_pred CC
Q 029198 81 GR 82 (197)
Q Consensus 81 ~~ 82 (197)
+.
T Consensus 74 ~~ 75 (218)
T 3l4b_C 74 PR 75 (218)
T ss_dssp SC
T ss_pred CC
Confidence 54
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.66 E-value=5.5e-05 Score=57.71 Aligned_cols=91 Identities=16% Similarity=0.110 Sum_probs=61.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHH---HHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~l~~~~~~~~~d~vi 77 (197)
+||+|.+|..+++.+...|++|+++++++++... ..+.... ...|..+.+ .+.+.....++|+||
T Consensus 147 ~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~---------~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~D~vi 214 (327)
T 1qor_A 147 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS---------ALKAGAW---QVINYREEDLVERLKEITGGKKVRVVY 214 (327)
T ss_dssp SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH---------HHHHTCS---EEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHHcCCC---EEEECCCccHHHHHHHHhCCCCceEEE
Confidence 6899999999999999999999999997554211 1111111 123555543 333333334799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+++| .......++.++...+++.+++
T Consensus 215 ~~~g--~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 215 DSVG--RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp ECSC--GGGHHHHHHTEEEEEEEEECCC
T ss_pred ECCc--hHHHHHHHHHhcCCCEEEEEec
Confidence 9998 4567778888874357887765
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00012 Score=56.74 Aligned_cols=83 Identities=12% Similarity=0.031 Sum_probs=62.0
Q ss_pred CCcccchHHHHHHHHH-HCCCeEEEEecCCCCccCCCCCC-------CchhhhhccCceEEEeecCCCHHHHHhhhhc--
Q 029198 1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPGE-------SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-- 70 (197)
Q Consensus 1 tGatG~vG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-- 70 (197)
|||+..+|.+.+..|+ +.|..++++.+..+......... ......+.......+.+|+.+.+.+.++++.
T Consensus 56 tGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~vi~~i~ 135 (401)
T 4ggo_A 56 LGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQVIEEAK 135 (401)
T ss_dssp ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHHHHHHH
Confidence 6999999999999998 67999999999876643322110 0112333456789999999999988888763
Q ss_pred ---cCccEEEeccCCC
Q 029198 71 ---KGFDVVYDINGRE 83 (197)
Q Consensus 71 ---~~~d~vi~~a~~~ 83 (197)
-++|+++|+++..
T Consensus 136 ~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 136 KKGIKFDLIVYSLASP 151 (401)
T ss_dssp HTTCCEEEEEECCCCS
T ss_pred HhcCCCCEEEEecccc
Confidence 2799999998864
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.61 E-value=8.9e-05 Score=56.71 Aligned_cols=91 Identities=19% Similarity=0.177 Sum_probs=61.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHH---HHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~l~~~~~~~~~d~vi 77 (197)
+||+|.+|..+++.+...|++|+++++++++... ..+.... ...|..+.+ .+.+.....++|+||
T Consensus 152 ~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~---------~~~~g~~---~~~d~~~~~~~~~i~~~~~~~~~d~vi 219 (333)
T 1wly_A 152 HAAAGGMGHIMVPWARHLGATVIGTVSTEEKAET---------ARKLGCH---HTINYSTQDFAEVVREITGGKGVDVVY 219 (333)
T ss_dssp TTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHHTCS---EEEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred ECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHcCCC---EEEECCCHHHHHHHHHHhCCCCCeEEE
Confidence 6899999999999999999999999998644211 1111111 123555433 344443334799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+++|. ......++.++...+++.+++
T Consensus 220 ~~~g~--~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 220 DSIGK--DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp ECSCT--TTHHHHHHTEEEEEEEEECCC
T ss_pred ECCcH--HHHHHHHHhhccCCEEEEEec
Confidence 99986 566777888773347777765
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.58 E-value=2.6e-05 Score=54.41 Aligned_cols=79 Identities=19% Similarity=0.099 Sum_probs=58.0
Q ss_pred cccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhh--hhccCccEEEec
Q 029198 3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS--LSAKGFDVVYDI 79 (197)
Q Consensus 3 atG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~--~~~~~~d~vi~~ 79 (197)
|.|.+|..+++.|.+. |++|++++++++.... +. ..++..+.+|..+++.+.++ ++ ++|.||.+
T Consensus 46 G~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~---------~~--~~g~~~~~gd~~~~~~l~~~~~~~--~ad~vi~~ 112 (183)
T 3c85_A 46 GMGRIGTGAYDELRARYGKISLGIEIREEAAQQ---------HR--SEGRNVISGDATDPDFWERILDTG--HVKLVLLA 112 (183)
T ss_dssp CCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH---------HH--HTTCCEEECCTTCHHHHHTBCSCC--CCCEEEEC
T ss_pred CCCHHHHHHHHHHHhccCCeEEEEECCHHHHHH---------HH--HCCCCEEEcCCCCHHHHHhccCCC--CCCEEEEe
Confidence 4699999999999999 9999999998655221 11 13567788999999888876 55 89999987
Q ss_pred cCCCccchHHHHHhCC
Q 029198 80 NGREADEVEPILDALP 95 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~ 95 (197)
.+. ......++..++
T Consensus 113 ~~~-~~~~~~~~~~~~ 127 (183)
T 3c85_A 113 MPH-HQGNQTALEQLQ 127 (183)
T ss_dssp CSS-HHHHHHHHHHHH
T ss_pred CCC-hHHHHHHHHHHH
Confidence 653 233444555555
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=2.8e-05 Score=74.03 Aligned_cols=82 Identities=11% Similarity=0.068 Sum_probs=58.3
Q ss_pred CCcccc-hHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc---------
Q 029198 1 MGGTRF-IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------- 70 (197)
Q Consensus 1 tGatG~-vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~--------- 70 (197)
|||++. ||.++++.|++.|++|++.+|+.+............++......+..+.+|+.|++++.++++.
T Consensus 2142 TGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~f 2221 (3089)
T 3zen_D 2142 TGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQTESL 2221 (3089)
T ss_dssp ESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCCEEEE
T ss_pred eCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhhhhhc
Confidence 799999 9999999999999999999998654100000000011111234678899999999998887542
Q ss_pred cCccEEEeccCC
Q 029198 71 KGFDVVYDINGR 82 (197)
Q Consensus 71 ~~~d~vi~~a~~ 82 (197)
-++|++||+||.
T Consensus 2222 G~IDILVNNAGi 2233 (3089)
T 3zen_D 2222 GPQSIHLKDAQT 2233 (3089)
T ss_dssp SSSEEEECCCCC
T ss_pred CCCCEEEECCCc
Confidence 158999999986
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00011 Score=57.05 Aligned_cols=92 Identities=12% Similarity=0.106 Sum_probs=63.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+|+ |.+|..+++.|...|++|++++|++++... ..+.. +.. +.+|..+.+++.+++. ++|+||+++
T Consensus 172 iGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~---------~~~~~-g~~-~~~~~~~~~~l~~~~~--~~DvVi~~~ 237 (369)
T 2eez_A 172 LGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQY---------LDDVF-GGR-VITLTATEANIKKSVQ--HADLLIGAV 237 (369)
T ss_dssp ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHT-TTS-EEEEECCHHHHHHHHH--HCSEEEECC
T ss_pred ECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH---------HHHhc-Cce-EEEecCCHHHHHHHHh--CCCEEEECC
Confidence 477 999999999999999999999998654211 01100 111 4466778888888887 899999998
Q ss_pred CCCcc-----chHHHHHhCCCCCcEEEEecc
Q 029198 81 GREAD-----EVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 81 ~~~~~-----~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
+.... -.+..++.++.-..+|.+|+.
T Consensus 238 g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 238 LVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp C-------CCSCHHHHTTSCTTCEEEECC--
T ss_pred CCCccccchhHHHHHHHhhcCCCEEEEEecC
Confidence 85421 156677888744578888864
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0003 Score=54.01 Aligned_cols=92 Identities=17% Similarity=0.116 Sum_probs=62.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHH---HHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~l~~~~~~~~~d~vi 77 (197)
+||+|.+|..++..+...|++|+++++++++... ..+.. ... ..|..+.+ .+.++....++|+||
T Consensus 173 ~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~---------~~~~g--a~~-~~d~~~~~~~~~~~~~~~~~~~d~vi 240 (343)
T 2eih_A 173 MAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRR---------AKALG--ADE-TVNYTHPDWPKEVRRLTGGKGADKVV 240 (343)
T ss_dssp CSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHHT--CSE-EEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHhcC--CCE-EEcCCcccHHHHHHHHhCCCCceEEE
Confidence 6899999999999999999999999997655211 11111 111 23555543 344443334799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEecc
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
++++ .......++.++...+++.+++.
T Consensus 241 ~~~g--~~~~~~~~~~l~~~G~~v~~g~~ 267 (343)
T 2eih_A 241 DHTG--ALYFEGVIKATANGGRIAIAGAS 267 (343)
T ss_dssp ESSC--SSSHHHHHHHEEEEEEEEESSCC
T ss_pred ECCC--HHHHHHHHHhhccCCEEEEEecC
Confidence 9998 35677888888833478877653
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00026 Score=54.60 Aligned_cols=91 Identities=12% Similarity=0.081 Sum_probs=60.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHH---HHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~l~~~~~~~~~d~vi 77 (197)
+||+|.+|..++..+...|++|+++++++++... ..+.... ...|..+.+ .+.+.....++|++|
T Consensus 169 ~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~vi 236 (354)
T 2j8z_A 169 HAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM---------AEKLGAA---AGFNYKKEDFSEATLKFTKGAGVNLIL 236 (354)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHTCS---EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHHcCCc---EEEecCChHHHHHHHHHhcCCCceEEE
Confidence 6899999999999999999999999997654211 1111111 123555443 333433334799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+++|.. .....++.++...+++.++.
T Consensus 237 ~~~G~~--~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 237 DCIGGS--YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp ESSCGG--GHHHHHHHEEEEEEEEECCC
T ss_pred ECCCch--HHHHHHHhccCCCEEEEEec
Confidence 999863 56667777773357777664
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00032 Score=53.63 Aligned_cols=91 Identities=20% Similarity=0.253 Sum_probs=61.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC---HHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~l~~~~~~~~~d~vi 77 (197)
+||+|.+|...+..+...|.+|+++++++++.. . ..+. ..-.. .|..+ .+.+.+.....++|+||
T Consensus 155 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~--------~~~~-ga~~~--~~~~~~~~~~~~~~~~~~~g~D~vi 222 (334)
T 3qwb_A 155 FAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-I--------AKEY-GAEYL--INASKEDILRQVLKFTNGKGVDASF 222 (334)
T ss_dssp SSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-H--------HHHT-TCSEE--EETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-H--------HHHc-CCcEE--EeCCCchHHHHHHHHhCCCCceEEE
Confidence 589999999999999999999999999765522 1 1111 11122 23333 33444444445799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
++++. ......++.++...+++.++.
T Consensus 223 d~~g~--~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 223 DSVGK--DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp ECCGG--GGHHHHHHHEEEEEEEEECCC
T ss_pred ECCCh--HHHHHHHHHhccCCEEEEEcC
Confidence 99985 566777888884457777764
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00026 Score=53.94 Aligned_cols=91 Identities=15% Similarity=0.061 Sum_probs=60.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
+||+|.+|...+..+...|.+|+++++++++... ..+.... .. .|..+. +.+.+.....++|+||
T Consensus 147 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~~Ga~-~~--~~~~~~~~~~~~~~~~~~~g~Dvvi 214 (325)
T 3jyn_A 147 HAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAH---------AKALGAW-ET--IDYSHEDVAKRVLELTDGKKCPVVY 214 (325)
T ss_dssp SSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH---------HHHHTCS-EE--EETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHcCCC-EE--EeCCCccHHHHHHHHhCCCCceEEE
Confidence 5899999999999999999999999997655221 1111111 22 244433 3444444445899999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
++++. ......++.++...+++.++.
T Consensus 215 d~~g~--~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 215 DGVGQ--DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp ESSCG--GGHHHHHTTEEEEEEEEECCC
T ss_pred ECCCh--HHHHHHHHHhcCCCEEEEEec
Confidence 99985 456667777774457777764
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00064 Score=52.17 Aligned_cols=92 Identities=15% Similarity=0.163 Sum_probs=59.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~~ 79 (197)
+||+|.+|...+..+...|.+|+++++++++.. ...+. ..-..+..+ .+ .+.+.++....++|+||++
T Consensus 166 ~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~---------~~~~~-ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~ 234 (342)
T 4eye_A 166 LGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATE---------FVKSV-GADIVLPLE-EGWAKAVREATGGAGVDMVVDP 234 (342)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH---------HHHHH-TCSEEEESS-TTHHHHHHHHTTTSCEEEEEES
T ss_pred ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH---------HHHhc-CCcEEecCc-hhHHHHHHHHhCCCCceEEEEC
Confidence 589999999999999999999999999776531 11111 112233333 22 2344444444579999999
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEec
Q 029198 80 NGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+|. ......++.++...+++.++.
T Consensus 235 ~g~--~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 235 IGG--PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp CC----CHHHHHHTEEEEEEEEEC--
T ss_pred Cch--hHHHHHHHhhcCCCEEEEEEc
Confidence 986 356677777774457777664
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0006 Score=52.77 Aligned_cols=92 Identities=20% Similarity=0.173 Sum_probs=59.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
+||+|.+|...+..+...|++|+++++++++... ..+.... .. .|..+. +.+.+.. ..++|+||
T Consensus 170 ~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~---------~~~~Ga~-~~--~~~~~~~~~~~~~~~~-~~g~D~vi 236 (362)
T 2c0c_A 170 TAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF---------LKSLGCD-RP--INYKTEPVGTVLKQEY-PEGVDVVY 236 (362)
T ss_dssp TTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHTTCS-EE--EETTTSCHHHHHHHHC-TTCEEEEE
T ss_pred eCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH---------HHHcCCc-EE--EecCChhHHHHHHHhc-CCCCCEEE
Confidence 5899999999999999999999999997554211 1111111 22 233332 2233322 24799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEecce
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~~ 107 (197)
++++. ......++.++...+++.+++..
T Consensus 237 d~~g~--~~~~~~~~~l~~~G~iv~~g~~~ 264 (362)
T 2c0c_A 237 ESVGG--AMFDLAVDALATKGRLIVIGFIS 264 (362)
T ss_dssp ECSCT--HHHHHHHHHEEEEEEEEECCCGG
T ss_pred ECCCH--HHHHHHHHHHhcCCEEEEEeCCC
Confidence 99985 45667777777335888877644
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00016 Score=55.66 Aligned_cols=91 Identities=13% Similarity=0.049 Sum_probs=58.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHH----HHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD----FVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~l~~~~~~~~~d~v 76 (197)
+||+|.+|..+++.+...|.+|++++|++++... ..+. +.. ...|+.+.+ .+.++... ++|+|
T Consensus 176 ~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~---------~~~~--g~~-~~~d~~~~~~~~~~~~~~~~~-~~D~v 242 (347)
T 2hcy_A 176 SGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEEL---------FRSI--GGE-VFIDFTKEKDIVGAVLKATDG-GAHGV 242 (347)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHH---------HHHT--TCC-EEEETTTCSCHHHHHHHHHTS-CEEEE
T ss_pred ECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHH---------HHHc--CCc-eEEecCccHhHHHHHHHHhCC-CCCEE
Confidence 5899999999999999999999999997665311 1111 111 123665322 33333333 79999
Q ss_pred EeccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 77 YDINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
|++++.. ...+..++.++...+++.+++
T Consensus 243 i~~~g~~-~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 243 INVSVSE-AAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EECSSCH-HHHHHHTTSEEEEEEEEECCC
T ss_pred EECCCcH-HHHHHHHHHHhcCCEEEEEeC
Confidence 9998742 334455555553357887765
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00027 Score=51.23 Aligned_cols=64 Identities=13% Similarity=-0.060 Sum_probs=51.2
Q ss_pred ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhh-hhccCccEEEeccCC
Q 029198 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDINGR 82 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~~~d~vi~~a~~ 82 (197)
.|.+|+.+++.|.+.|+ |++++++++... ... .++.++.+|..+++.+.++ ++ ++|.||.+.+.
T Consensus 17 ~G~~G~~la~~L~~~g~-v~vid~~~~~~~----------~~~--~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~~ 81 (234)
T 2aef_A 17 WSESTLECLRELRGSEV-FVLAEDENVRKK----------VLR--SGANFVHGDPTRVSDLEKANVR--GARAVIVDLES 81 (234)
T ss_dssp CCHHHHHHHHHSTTSEE-EEEESCGGGHHH----------HHH--TTCEEEESCTTCHHHHHHTTCT--TCSEEEECCSC
T ss_pred CChHHHHHHHHHHhCCe-EEEEECCHHHHH----------HHh--cCCeEEEcCCCCHHHHHhcCcc--hhcEEEEcCCC
Confidence 49999999999999999 999998765421 111 4588999999999999877 66 89999977653
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00065 Score=46.16 Aligned_cols=78 Identities=15% Similarity=0.107 Sum_probs=53.6
Q ss_pred ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH--HHHHhhhhc----cCccEEE
Q 029198 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSA----KGFDVVY 77 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~l~~~~~~----~~~d~vi 77 (197)
+|.++.+.+..|.+.|.+|++..|++..... ... ......+.......+.+|+.++ +++.++++. .+-|+++
T Consensus 25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~-~~~-~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLV 102 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDA-HPD-EGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLV 102 (157)
T ss_dssp EBCCCHHHHHHHHHTTCCEEEECSCTTSTTS-CTT-HHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEE
T ss_pred cCCCCHHHHHHHHHcCCCEEEECCCcccccc-ccc-HHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 5788999999999999999998886554211 000 0112222334577788899998 888776642 2349999
Q ss_pred eccCCC
Q 029198 78 DINGRE 83 (197)
Q Consensus 78 ~~a~~~ 83 (197)
||+|..
T Consensus 103 nnAgg~ 108 (157)
T 3gxh_A 103 HCLANY 108 (157)
T ss_dssp ECSBSH
T ss_pred ECCCCC
Confidence 999864
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0011 Score=51.01 Aligned_cols=91 Identities=15% Similarity=0.207 Sum_probs=61.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
+||+|.+|...+..+...|.+|+++++++++... ..+.... .. .|..+. +.+.++....++|+||
T Consensus 171 ~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~~Ga~-~~--~~~~~~~~~~~v~~~~~~~g~D~vi 238 (349)
T 3pi7_A 171 TAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIAL---------LKDIGAA-HV--LNEKAPDFEATLREVMKAEQPRIFL 238 (349)
T ss_dssp SSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHH---------HHHHTCS-EE--EETTSTTHHHHHHHHHHHHCCCEEE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHcCCC-EE--EECCcHHHHHHHHHHhcCCCCcEEE
Confidence 5899999999999999999999999997765221 1111111 22 233333 3344444335899999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
++++. ......++.++...+++.+++
T Consensus 239 d~~g~--~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 239 DAVTG--PLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp ESSCH--HHHHHHHHHSCTTCEEEECCC
T ss_pred ECCCC--hhHHHHHhhhcCCCEEEEEec
Confidence 99985 345677888885568887764
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00043 Score=52.58 Aligned_cols=70 Identities=23% Similarity=0.287 Sum_probs=45.1
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhccC--ceEEEeecCCCHHHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSS--KILHLKGDRKDYDFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~~~~~~~d~v 76 (197)
+||+|++|+.++..|+..| ++|+++++++.... ..++..... .+.... ..++.+++++ ++|+|
T Consensus 6 iGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~-------a~dL~~~~~~~~l~~~~----~t~d~~~a~~--~aDvV 72 (314)
T 1mld_A 6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-------AADLSHIETRATVKGYL----GPEQLPDCLK--GCDVV 72 (314)
T ss_dssp ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-------HHHHTTSSSSCEEEEEE----SGGGHHHHHT--TCSEE
T ss_pred ECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHH-------HHHHhccCcCceEEEec----CCCCHHHHhC--CCCEE
Confidence 5889999999999999888 79999999761110 001111111 111111 1234566677 99999
Q ss_pred EeccCCC
Q 029198 77 YDINGRE 83 (197)
Q Consensus 77 i~~a~~~ 83 (197)
|++++..
T Consensus 73 vi~ag~~ 79 (314)
T 1mld_A 73 VIPAGVP 79 (314)
T ss_dssp EECCSCC
T ss_pred EECCCcC
Confidence 9999864
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00046 Score=53.24 Aligned_cols=92 Identities=15% Similarity=0.162 Sum_probs=60.0
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHH---HHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~l~~~~~~~~~d~v 76 (197)
+||+|.+|..++..+...|+ +|+++++++++... ..+.. +.. ...|..+.+ .+.+.... ++|++
T Consensus 167 ~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~---------~~~~~-g~~-~~~d~~~~~~~~~~~~~~~~-~~d~v 234 (357)
T 2zb4_A 167 SGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCIL---------LTSEL-GFD-AAINYKKDNVAEQLRESCPA-GVDVY 234 (357)
T ss_dssp SSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHH---------HHHTS-CCS-EEEETTTSCHHHHHHHHCTT-CEEEE
T ss_pred ECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHH---------HHHHc-CCc-eEEecCchHHHHHHHHhcCC-CCCEE
Confidence 69999999999999999999 99999997644211 01100 111 124555433 33333333 79999
Q ss_pred EeccCCCccchHHHHHhCCCCCcEEEEecc
Q 029198 77 YDINGREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
|+++|. ......++.++...+++.++..
T Consensus 235 i~~~G~--~~~~~~~~~l~~~G~iv~~G~~ 262 (357)
T 2zb4_A 235 FDNVGG--NISDTVISQMNENSHIILCGQI 262 (357)
T ss_dssp EESCCH--HHHHHHHHTEEEEEEEEECCCG
T ss_pred EECCCH--HHHHHHHHHhccCcEEEEECCc
Confidence 999984 4556667777733578877654
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00081 Score=51.38 Aligned_cols=93 Identities=19% Similarity=0.277 Sum_probs=60.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHH---HHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~l~~~~~~~~~d~vi 77 (197)
+||+|.+|...+..+...|.+|+++++++++..... .+. +.. ...|..+.+ .+.+.. ..++|+||
T Consensus 156 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--------~~~--g~~-~~~~~~~~~~~~~~~~~~-~~~~d~vi 223 (336)
T 4b7c_A 156 SGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLV--------EEL--GFD-GAIDYKNEDLAAGLKREC-PKGIDVFF 223 (336)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HTT--CCS-EEEETTTSCHHHHHHHHC-TTCEEEEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHc--CCC-EEEECCCHHHHHHHHHhc-CCCceEEE
Confidence 689999999999999999999999999865532110 111 111 123444433 333333 23799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEecce
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~~ 107 (197)
+++|. ......++.++...+++.++...
T Consensus 224 ~~~g~--~~~~~~~~~l~~~G~iv~~G~~~ 251 (336)
T 4b7c_A 224 DNVGG--EILDTVLTRIAFKARIVLCGAIS 251 (336)
T ss_dssp ESSCH--HHHHHHHTTEEEEEEEEECCCGG
T ss_pred ECCCc--chHHHHHHHHhhCCEEEEEeecc
Confidence 99984 34556666666345888777654
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00077 Score=51.43 Aligned_cols=91 Identities=14% Similarity=0.262 Sum_probs=58.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-H---HHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-Y---DFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~---~~l~~~~~~~~~d~v 76 (197)
+||+|.+|..+++.+...|++|+++++++++... ..+. +.. ...|..+ . +.+.++.. .++|++
T Consensus 152 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~---------~~~~--g~~-~~~d~~~~~~~~~~~~~~~~-~~~d~v 218 (333)
T 1v3u_A 152 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY---------LKQI--GFD-AAFNYKTVNSLEEALKKASP-DGYDCY 218 (333)
T ss_dssp ESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHT--TCS-EEEETTSCSCHHHHHHHHCT-TCEEEE
T ss_pred ecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHhc--CCc-EEEecCCHHHHHHHHHHHhC-CCCeEE
Confidence 5899999999999999999999999987554211 1111 111 2246655 2 22333322 379999
Q ss_pred EeccCCCccchHHHHHhCCCCCcEEEEecc
Q 029198 77 YDINGREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
|+++|. ......++.++...+++.++..
T Consensus 219 i~~~g~--~~~~~~~~~l~~~G~~v~~g~~ 246 (333)
T 1v3u_A 219 FDNVGG--EFLNTVLSQMKDFGKIAICGAI 246 (333)
T ss_dssp EESSCH--HHHHHHHTTEEEEEEEEECCCC
T ss_pred EECCCh--HHHHHHHHHHhcCCEEEEEecc
Confidence 999985 3355566666633577777654
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0012 Score=50.62 Aligned_cols=91 Identities=14% Similarity=0.107 Sum_probs=59.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
+||+|.+|...+..+...|.+|+++++++++... ..+.... .. .|..+. +.+.+.....++|+||
T Consensus 151 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~lga~-~~--~~~~~~~~~~~~~~~~~~~g~Dvvi 218 (340)
T 3gms_A 151 NACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEE---------LLRLGAA-YV--IDTSTAPLYETVMELTNGIGADAAI 218 (340)
T ss_dssp SSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHH---------HHHHTCS-EE--EETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhCCCc-EE--EeCCcccHHHHHHHHhCCCCCcEEE
Confidence 5899999999999998899999999998776321 1111112 12 244432 3444444445899999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+++|.. .....++.++...+++.++.
T Consensus 219 d~~g~~--~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 219 DSIGGP--DGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp ESSCHH--HHHHHHHTEEEEEEEEECCC
T ss_pred ECCCCh--hHHHHHHHhcCCCEEEEEee
Confidence 999853 34455566664457777764
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0014 Score=50.43 Aligned_cols=90 Identities=18% Similarity=0.176 Sum_probs=59.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
+||+|.+|...+..+...|.+|+++++++++... ..+.... .. .|..+. +.+.++. ..++|+||
T Consensus 174 ~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~lGa~-~~--~~~~~~~~~~~~~~~~-~~g~Dvvi 240 (353)
T 4dup_A 174 HGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEA---------CERLGAK-RG--INYRSEDFAAVIKAET-GQGVDIIL 240 (353)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHHTCS-EE--EETTTSCHHHHHHHHH-SSCEEEEE
T ss_pred EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhcCCC-EE--EeCCchHHHHHHHHHh-CCCceEEE
Confidence 5899999999999999999999999998665221 1111111 22 234433 3344433 45899999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+++|. ......++.++...+++.++.
T Consensus 241 d~~g~--~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 241 DMIGA--AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp ESCCG--GGHHHHHHTEEEEEEEEECCC
T ss_pred ECCCH--HHHHHHHHHhccCCEEEEEEe
Confidence 99985 356667777773357777664
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00049 Score=53.05 Aligned_cols=91 Identities=12% Similarity=0.141 Sum_probs=59.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHH---HHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---l~~~~~~~~~d~vi 77 (197)
+||+|.+|..+++.+...|++|+++++++++... ..+. +.. ...|..+.+. +.+.....++|+||
T Consensus 177 ~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~~--ga~-~~~d~~~~~~~~~~~~~~~~~~~D~vi 244 (351)
T 1yb5_A 177 HGASGGVGLAACQIARAYGLKILGTAGTEEGQKI---------VLQN--GAH-EVFNHREVNYIDKIKKYVGEKGIDIII 244 (351)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHT--TCS-EEEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH---------HHHc--CCC-EEEeCCCchHHHHHHHHcCCCCcEEEE
Confidence 5899999999999999999999999998654221 0111 111 1235555433 33333334799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+++|. ......++.++...+++.++.
T Consensus 245 ~~~G~--~~~~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 245 EMLAN--VNLSKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp ESCHH--HHHHHHHHHEEEEEEEEECCC
T ss_pred ECCCh--HHHHHHHHhccCCCEEEEEec
Confidence 99974 345556666663357777664
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0024 Score=47.96 Aligned_cols=87 Identities=15% Similarity=0.162 Sum_probs=57.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~~ 79 (197)
+||+|.+|...+..+...|.+|+++++++++... ..+. +... ..|..+ .+ +.+.+. ++|+||+
T Consensus 132 ~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~~--ga~~-~~~~~~~~~-~~~~~~--~~d~vid- 195 (302)
T 1iz0_A 132 QAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL---------PLAL--GAEE-AATYAEVPE-RAKAWG--GLDLVLE- 195 (302)
T ss_dssp SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH---------HHHT--TCSE-EEEGGGHHH-HHHHTT--SEEEEEE-
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHhc--CCCE-EEECCcchh-HHHHhc--CceEEEE-
Confidence 5899999999999999999999999997665221 1111 1111 235555 33 333334 8999999
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEec
Q 029198 80 NGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
++. ......++.++...+++.++.
T Consensus 196 ~g~--~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 196 VRG--KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp CSC--TTHHHHHTTEEEEEEEEEC--
T ss_pred CCH--HHHHHHHHhhccCCEEEEEeC
Confidence 875 466777777773347776664
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0016 Score=49.94 Aligned_cols=90 Identities=14% Similarity=0.210 Sum_probs=58.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhh-hccCceEEEeecCCCH----HHHHhhhhccCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDY----DFVKSSLSAKGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~----~~l~~~~~~~~~d~ 75 (197)
+||+|.+|..++..+...|++|+++++++++... .. +. +.. ...|..+. +.+.++.. .++|+
T Consensus 162 ~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~---------~~~~~--g~~-~~~d~~~~~~~~~~~~~~~~-~~~d~ 228 (345)
T 2j3h_A 162 SAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDL---------LKTKF--GFD-DAFNYKEESDLTAALKRCFP-NGIDI 228 (345)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHTS--CCS-EEEETTSCSCSHHHHHHHCT-TCEEE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHHc--CCc-eEEecCCHHHHHHHHHHHhC-CCCcE
Confidence 6899999999999999999999999997654211 01 11 111 12355432 33333332 47999
Q ss_pred EEeccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 76 VYDINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 76 vi~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
||++++. ......++.++...+++.++.
T Consensus 229 vi~~~g~--~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 229 YFENVGG--KMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp EEESSCH--HHHHHHHTTEEEEEEEEECCC
T ss_pred EEECCCH--HHHHHHHHHHhcCCEEEEEcc
Confidence 9999975 355566666663357777664
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0045 Score=47.06 Aligned_cols=90 Identities=17% Similarity=0.156 Sum_probs=56.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH--HHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~l~~~~~~~~~d~vi~ 78 (197)
+||+|.+|...+..+...|.+|+++++++++... ..+.... .. .|..+. +.+.++ ...++|+||+
T Consensus 156 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~---------~~~lGa~-~~--i~~~~~~~~~~~~~-~~~~~d~vid 222 (328)
T 1xa0_A 156 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY---------LRVLGAK-EV--LAREDVMAERIRPL-DKQRWAAAVD 222 (328)
T ss_dssp SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH---------HHHTTCS-EE--EECC---------C-CSCCEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHHcCCc-EE--EecCCcHHHHHHHh-cCCcccEEEE
Confidence 5889999999999999999999999998665321 1111111 12 233333 222222 2247999999
Q ss_pred ccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 79 INGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+++. ......++.++...+++.++.
T Consensus 223 ~~g~--~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 223 PVGG--RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp CSTT--TTHHHHHHTEEEEEEEEECSC
T ss_pred CCcH--HHHHHHHHhhccCCEEEEEee
Confidence 9985 356677777774357776654
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0007 Score=53.39 Aligned_cols=66 Identities=18% Similarity=0.271 Sum_probs=53.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhh-hhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~~~d~vi~~a~ 81 (197)
|.|.+|+.+++.|.+.|++|++++++++..... . ..++.++.+|.++++.++++ ++ ++|+||-+..
T Consensus 11 G~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~---------~--~~g~~vi~GDat~~~~L~~agi~--~A~~viv~~~ 77 (413)
T 3l9w_A 11 GFGRFGQITGRLLLSSGVKMVVLDHDPDHIETL---------R--KFGMKVFYGDATRMDLLESAGAA--KAEVLINAID 77 (413)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHH---------H--HTTCCCEESCTTCHHHHHHTTTT--TCSEEEECCS
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH---------H--hCCCeEEEcCCCCHHHHHhcCCC--ccCEEEECCC
Confidence 459999999999999999999999987753211 1 13678899999999999887 55 8899887654
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.00013 Score=55.80 Aligned_cols=95 Identities=13% Similarity=0.052 Sum_probs=55.4
Q ss_pred CCcccchHHHHHHHHHHCCC--e-----EEEEecCCCC-ccCCCCCCCchhhhhcc-CceEEEeecCCCHHHHHhhhhcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--Q-----VTLFTRGKAP-IAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~-----V~~~~r~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~~ 71 (197)
|||+|+||++++..|+..|. + +++++..+.. ...-. ..++.... +-.. ++...+...+.++
T Consensus 9 ~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~----a~DL~~~~~~~~~----~~~~~~~~~~~~~-- 78 (333)
T 5mdh_A 9 TGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGV----LMELQDCALPLLK----DVIATDKEEIAFK-- 78 (333)
T ss_dssp SSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHH----HHHHHHTCCTTEE----EEEEESCHHHHTT--
T ss_pred ECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhh----HhhhHhhhhcccC----CEEEcCCcHHHhC--
Confidence 69999999999999998874 5 9999886421 00000 01111111 1111 1221223455666
Q ss_pred CccEEEeccCCCcc--------------chHHHHHhCC--CCC--cEEEEec
Q 029198 72 GFDVVYDINGREAD--------------EVEPILDALP--NLE--QFIYCSS 105 (197)
Q Consensus 72 ~~d~vi~~a~~~~~--------------~~~~ll~~~~--~~~--~~v~~Ss 105 (197)
++|+||++||.... .++.+++.++ +.+ +++.+|.
T Consensus 79 daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN 130 (333)
T 5mdh_A 79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN 130 (333)
T ss_dssp TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 99999999986421 1456666666 443 5776665
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0032 Score=50.04 Aligned_cols=94 Identities=13% Similarity=0.180 Sum_probs=59.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEee--cCCC----------------HH
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG--DRKD----------------YD 62 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~~----------------~~ 62 (197)
+||+|.+|...+..+...|.+|+++++++++... ..+......+-.. |+.+ .+
T Consensus 227 ~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~---------~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (447)
T 4a0s_A 227 WGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAA---------VRALGCDLVINRAELGITDDIADDPRRVVETGRKLAK 297 (447)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhcCCCEEEecccccccccccccccccchhhhHHHH
Confidence 5899999999999999999999999986554211 1111111111111 1110 23
Q ss_pred HHHhhhhccCccEEEeccCCCccchHHHHHhCCCCCcEEEEecc
Q 029198 63 FVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 63 ~l~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
.+.+.. ..++|+||+++|. ......+..++.-.+++.+++.
T Consensus 298 ~v~~~~-g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~~ 338 (447)
T 4a0s_A 298 LVVEKA-GREPDIVFEHTGR--VTFGLSVIVARRGGTVVTCGSS 338 (447)
T ss_dssp HHHHHH-SSCCSEEEECSCH--HHHHHHHHHSCTTCEEEESCCT
T ss_pred HHHHHh-CCCceEEEECCCc--hHHHHHHHHHhcCCEEEEEecC
Confidence 344433 4579999999985 3566777777744688887753
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=96.65 E-value=0.00067 Score=51.89 Aligned_cols=64 Identities=14% Similarity=-0.024 Sum_probs=52.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhh-hhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~~~d~vi~~a~ 81 (197)
|.|.+|+.+++.|.+.|+ |++++++++... +. ..++.++.+|..|++.++++ ++ ++|.|+-+.+
T Consensus 122 G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~----------~~~~~~i~gd~~~~~~L~~a~i~--~a~~vi~~~~ 186 (336)
T 1lnq_A 122 GWSESTLECLRELRGSEV-FVLAEDENVRKK--VL----------RSGANFVHGDPTRVSDLEKANVR--GARAVIVDLE 186 (336)
T ss_dssp SCCHHHHHHHTTGGGSCE-EEEESCGGGHHH--HH----------HTTCEEEESCTTSHHHHHHTCST--TEEEEEECCS
T ss_pred CCcHHHHHHHHHHHhCCc-EEEEeCChhhhh--HH----------hCCcEEEEeCCCCHHHHHhcChh--hccEEEEcCC
Confidence 359999999999999999 999988776532 11 25789999999999999987 66 8999987765
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0056 Score=47.36 Aligned_cols=91 Identities=14% Similarity=0.173 Sum_probs=62.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+|+ |.+|...+..+...|.+|+++++++++..... .+. +.. ...|..+.+.+.++.. ++|+||+++
T Consensus 194 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~--------~~l--Ga~-~v~~~~~~~~~~~~~~--~~D~vid~~ 259 (366)
T 1yqd_A 194 VGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL--------KNF--GAD-SFLVSRDQEQMQAAAG--TLDGIIDTV 259 (366)
T ss_dssp ECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH--------HTS--CCS-EEEETTCHHHHHHTTT--CEEEEEECC
T ss_pred ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------Hhc--CCc-eEEeccCHHHHHHhhC--CCCEEEECC
Confidence 364 99999999999999999999999876532100 011 111 1246667777776665 899999998
Q ss_pred CCCccchHHHHHhCCCCCcEEEEecc
Q 029198 81 GREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
+.. ......++.++...+++.+++.
T Consensus 260 g~~-~~~~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 260 SAV-HPLLPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp SSC-CCSHHHHHHEEEEEEEEECCCC
T ss_pred CcH-HHHHHHHHHHhcCCEEEEEccC
Confidence 853 3456777888733578877753
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.016 Score=43.97 Aligned_cols=84 Identities=14% Similarity=0.193 Sum_probs=56.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|++|++.+|++.... .+.... ..+++.+++. ..|+|+.+.-.
T Consensus 146 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------------~~~~~~----~~~~l~ell~--~aDiV~l~~Pl 203 (315)
T 3pp8_A 146 GAGVLGAKVAESLQAWGFPLRCWSRSRKSWP----------------GVESYV----GREELRAFLN--QTRVLINLLPN 203 (315)
T ss_dssp CCSHHHHHHHHHHHTTTCCEEEEESSCCCCT----------------TCEEEE----SHHHHHHHHH--TCSEEEECCCC
T ss_pred eeCHHHHHHHHHHHHCCCEEEEEcCCchhhh----------------hhhhhc----ccCCHHHHHh--hCCEEEEecCC
Confidence 6799999999999999999999999876421 122111 2356778887 88998866543
Q ss_pred Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+.. + ....+..|+.-.-+|++|...+
T Consensus 204 t~~t~~li~~~~l~~mk~gailIN~aRG~~ 233 (315)
T 3pp8_A 204 TAQTVGIINSELLDQLPDGAYVLNLARGVH 233 (315)
T ss_dssp CGGGTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred chhhhhhccHHHHhhCCCCCEEEECCCChh
Confidence 311 1 1345566664456777776554
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0021 Score=49.54 Aligned_cols=92 Identities=15% Similarity=0.202 Sum_probs=52.2
Q ss_pred CCcccchHHHHHHHHHHCC-----C-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEG-----H-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d 74 (197)
+||||++|+.+++.|++++ + +++++.+..+.... +.... ..+.. ...+.+ .++ +++ .+. ++|
T Consensus 15 vGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~-~~~~~-~~l~~-~~~~~~--~~~-~~~----~~~--~~D 82 (352)
T 2nqt_A 15 AGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGST-LGEHH-PHLTP-LAHRVV--EPT-EAA----VLG--GHD 82 (352)
T ss_dssp ETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSB-GGGTC-TTCGG-GTTCBC--EEC-CHH----HHT--TCS
T ss_pred ECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCc-hhhhc-ccccc-cceeee--ccC-CHH----Hhc--CCC
Confidence 4999999999999999887 4 78888754322110 10000 00000 011222 122 222 244 899
Q ss_pred EEEeccCCCccchHHHHHhCC-CCCcEEEEecce
Q 029198 75 VVYDINGREADEVEPILDALP-NLEQFIYCSSAG 107 (197)
Q Consensus 75 ~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~ 107 (197)
+||.+.+.. ..+.+++.+. + .++|-+|+..
T Consensus 83 vVf~alg~~--~s~~~~~~~~~G-~~vIDlSa~~ 113 (352)
T 2nqt_A 83 AVFLALPHG--HSAVLAQQLSPE-TLIIDCGADF 113 (352)
T ss_dssp EEEECCTTS--CCHHHHHHSCTT-SEEEECSSTT
T ss_pred EEEECCCCc--chHHHHHHHhCC-CEEEEECCCc
Confidence 999988764 3444554446 5 4788888754
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0024 Score=51.12 Aligned_cols=67 Identities=15% Similarity=0.257 Sum_probs=52.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|.|.+|+++++.|.+.||+|++++++++.... +. ..-++..+.||-++++.|+++-- ..+|.+|-+.
T Consensus 10 G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~---------~~-~~~~~~~i~Gd~~~~~~L~~Agi-~~ad~~ia~t 76 (461)
T 4g65_A 10 GAGQVGGTLAENLVGENNDITIVDKDGDRLRE---------LQ-DKYDLRVVNGHASHPDVLHEAGA-QDADMLVAVT 76 (461)
T ss_dssp CCSHHHHHHHHHTCSTTEEEEEEESCHHHHHH---------HH-HHSSCEEEESCTTCHHHHHHHTT-TTCSEEEECC
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHH---------HH-HhcCcEEEEEcCCCHHHHHhcCC-CcCCEEEEEc
Confidence 67999999999999999999999998766321 11 11367899999999999998843 2899988544
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0028 Score=50.54 Aligned_cols=93 Identities=11% Similarity=0.199 Sum_probs=58.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEee---cC--------CCH-------H
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG---DR--------KDY-------D 62 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~--------~~~-------~ 62 (197)
+||+|.+|...+..+...|.+|+++++++++.. . ..+.... ..+.. |+ .++ +
T Consensus 235 ~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~-~--------~~~lGa~-~vi~~~~~d~~~~~~~~~~~~~~~~~~~~ 304 (456)
T 3krt_A 235 WGASGGLGSYATQFALAGGANPICVVSSPQKAE-I--------CRAMGAE-AIIDRNAEGYRFWKDENTQDPKEWKRFGK 304 (456)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-H--------HHHHTCC-EEEETTTTTCCSEEETTEECHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHH-H--------HHhhCCc-EEEecCcCcccccccccccchHHHHHHHH
Confidence 589999999999999999999999998655421 1 1111111 11111 11 121 3
Q ss_pred HHHhhhhccCccEEEeccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 63 FVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 63 ~l~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.+.++....++|+||+++|. ......++.++.-.+++.+++
T Consensus 305 ~i~~~t~g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 305 RIRELTGGEDIDIVFEHPGR--ETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp HHHHHHTSCCEEEEEECSCH--HHHHHHHHHEEEEEEEEESCC
T ss_pred HHHHHhCCCCCcEEEEcCCc--hhHHHHHHHhhCCcEEEEEec
Confidence 44444444589999999985 456667777773357776654
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0041 Score=48.26 Aligned_cols=92 Identities=15% Similarity=0.126 Sum_probs=55.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+||+|.+|...+..+...|.+|+++++ +++. . ...+.... .. .|..+.+...++.+..++|+||+++
T Consensus 190 ~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~-~--------~~~~lGa~-~v--~~~~~~~~~~~~~~~~g~D~vid~~ 256 (375)
T 2vn8_A 190 LGASGGVGTFAIQVMKAWDAHVTAVCS-QDAS-E--------LVRKLGAD-DV--IDYKSGSVEEQLKSLKPFDFILDNV 256 (375)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGH-H--------HHHHTTCS-EE--EETTSSCHHHHHHTSCCBSEEEESS
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHH-H--------HHHHcCCC-EE--EECCchHHHHHHhhcCCCCEEEECC
Confidence 488999999999999999999999884 3321 1 11111111 12 2444433333333324899999999
Q ss_pred CCCccchHHHHHhCCCCCcEEEEec
Q 029198 81 GREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
|.........++.++...+++.+++
T Consensus 257 g~~~~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 257 GGSTETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp CTTHHHHGGGGBCSSSCCEEEESCC
T ss_pred CChhhhhHHHHHhhcCCcEEEEeCC
Confidence 8642223444555554457877764
|
| >4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0094 Score=47.42 Aligned_cols=31 Identities=23% Similarity=0.432 Sum_probs=28.7
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCcc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA 33 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~ 33 (197)
|+|++|..++..|++.||+|++++|++++..
T Consensus 15 GlG~vG~~~A~~La~~G~~V~~~D~~~~kv~ 45 (446)
T 4a7p_A 15 GTGYVGLVSGACFSDFGHEVVCVDKDARKIE 45 (446)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCSTTHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 6899999999999999999999999988754
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.36 E-value=0.027 Score=41.16 Aligned_cols=105 Identities=16% Similarity=0.110 Sum_probs=62.5
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCC---------C-----chhhhhccCceEEEeecC-CCHHHHHh
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE---------S-----DQEFAEFSSKILHLKGDR-KDYDFVKS 66 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~---------~-----~~~~~~~~~~~~~~~~d~-~~~~~l~~ 66 (197)
|+|.+|++++..|+..|. +++++++..-...+..+.. . ..++.+.++.+.+...+. .+.+.+.+
T Consensus 35 G~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~ 114 (251)
T 1zud_1 35 GLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKD 114 (251)
T ss_dssp CCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccCCHHHHHH
Confidence 458899999999999995 8888888754322111110 0 112234455555444332 24466777
Q ss_pred hhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecceecc
Q 029198 67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
+++ ++|+||.+.. +...-..+-+++. ....+|..+..+.+|
T Consensus 115 ~~~--~~DvVi~~~d-~~~~r~~l~~~~~~~~~p~i~~~~~g~~G 156 (251)
T 1zud_1 115 AVA--RADVVLDCTD-NMATRQEINAACVALNTPLITASAVGFGG 156 (251)
T ss_dssp HHH--HCSEEEECCS-SHHHHHHHHHHHHHTTCCEEEEEEEBTEE
T ss_pred HHh--cCCEEEECCC-CHHHHHHHHHHHHHhCCCEEEEeccccce
Confidence 787 8999998864 3232233444455 445677777655555
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0042 Score=47.12 Aligned_cols=74 Identities=9% Similarity=0.140 Sum_probs=50.0
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCC---CccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKA---PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~v 76 (197)
+|+ |.+|++++..|++.|. +|+++.|+++ +..... .++.. .....+...++.+.+++.+.+. .+|+|
T Consensus 160 lGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la-----~~~~~-~~~~~~~~~~~~~~~~l~~~l~--~aDiI 230 (315)
T 3tnl_A 160 CGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTV-----EKINS-KTDCKAQLFDIEDHEQLRKEIA--ESVIF 230 (315)
T ss_dssp ECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHH-----HHHHH-HSSCEEEEEETTCHHHHHHHHH--TCSEE
T ss_pred ECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHH-----HHhhh-hcCCceEEeccchHHHHHhhhc--CCCEE
Confidence 365 8999999999999998 8999999843 211100 01111 1123445567778777888887 89999
Q ss_pred EeccCCC
Q 029198 77 YDINGRE 83 (197)
Q Consensus 77 i~~a~~~ 83 (197)
|++....
T Consensus 231 INaTp~G 237 (315)
T 3tnl_A 231 TNATGVG 237 (315)
T ss_dssp EECSSTT
T ss_pred EECccCC
Confidence 9987543
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.018 Score=43.19 Aligned_cols=93 Identities=10% Similarity=0.040 Sum_probs=49.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCC--chhhhhccCceEEEeecCCCHHHHHhhhh-----c-cCcc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES--DQEFAEFSSKILHLKGDRKDYDFVKSSLS-----A-KGFD 74 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~l~~~~~-----~-~~~d 74 (197)
|.|.+|..++..|++.||+|++.+|++++.......-. .....+......++..-+.+...+++.+. . ..-+
T Consensus 12 GLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~ 91 (297)
T 4gbj_A 12 GLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDG 91 (297)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTC
T ss_pred ecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCe
Confidence 57999999999999999999999999877543322100 11112222233334444455554444321 1 1445
Q ss_pred EEEeccCCCccchHHHHHhCC
Q 029198 75 VVYDINGREADEVEPILDALP 95 (197)
Q Consensus 75 ~vi~~a~~~~~~~~~ll~~~~ 95 (197)
++|.+.......++.+.+.+.
T Consensus 92 iiid~sT~~p~~~~~~~~~~~ 112 (297)
T 4gbj_A 92 VHVSMSTISPETSRQLAQVHE 112 (297)
T ss_dssp EEEECSCCCHHHHHHHHHHHH
T ss_pred EEEECCCCChHHHHHHHHHHH
Confidence 777777766666666655554
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.022 Score=41.58 Aligned_cols=104 Identities=11% Similarity=0.083 Sum_probs=61.8
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCC---------C-----chhhhhccCceE--EEeecCCCHHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE---------S-----DQEFAEFSSKIL--HLKGDRKDYDFVK 65 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~---------~-----~~~~~~~~~~~~--~~~~d~~~~~~l~ 65 (197)
|+|.+|++++..|++.|. +|++++++.-...+..+.. . ..++.+.++.+. .+..++. .+.+.
T Consensus 38 G~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~ 116 (249)
T 1jw9_B 38 GLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD-DAELA 116 (249)
T ss_dssp CCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC-HHHHH
T ss_pred eeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccCC-HhHHH
Confidence 468999999999999996 8999999863321111100 0 112234445444 4444454 45567
Q ss_pred hhhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecceecc
Q 029198 66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
++++ ++|+||.+... ...-..+.+.++ ....+|..+..+.+|
T Consensus 117 ~~~~--~~DvVi~~~d~-~~~~~~l~~~~~~~~~p~i~~~~~g~~g 159 (249)
T 1jw9_B 117 ALIA--EHDLVLDCTDN-VAVRNQLNAGCFAAKVPLVSGAAIRMEG 159 (249)
T ss_dssp HHHH--TSSEEEECCSS-HHHHHHHHHHHHHHTCCEEEEEEEBTEE
T ss_pred HHHh--CCCEEEEeCCC-HHHHHHHHHHHHHcCCCEEEeeeccceE
Confidence 7777 89999988743 232233445555 335667666554444
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0017 Score=50.26 Aligned_cols=90 Identities=11% Similarity=0.182 Sum_probs=58.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc-cCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
+|+ |.+|..++..|...|.+|++++|++++... +.+. ...+.. ...+.+++.+.+. ++|+||++
T Consensus 173 iGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~---------~~~~~~~~~~~---~~~~~~~~~~~~~--~~DvVI~~ 237 (361)
T 1pjc_A 173 LGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSY---------LETLFGSRVEL---LYSNSAEIETAVA--EADLLIGA 237 (361)
T ss_dssp ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHHGGGSEE---EECCHHHHHHHHH--TCSEEEEC
T ss_pred ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH---------HHHhhCceeEe---eeCCHHHHHHHHc--CCCEEEEC
Confidence 366 999999999999999999999998655221 1111 112211 2234556667776 89999999
Q ss_pred cCCCcc-----chHHHHHhCCCCCcEEEEec
Q 029198 80 NGREAD-----EVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 80 a~~~~~-----~~~~ll~~~~~~~~~v~~Ss 105 (197)
.+.... -.+..++.++....++.+++
T Consensus 238 ~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 238 VLVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 875321 14556777774456776664
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0093 Score=46.04 Aligned_cols=92 Identities=14% Similarity=0.169 Sum_probs=60.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~~ 79 (197)
+| +|.+|...+..+...|.+|+++++++++... ..+... -..+..+-.+ .+.+.++....++|+||++
T Consensus 196 ~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~lGa-~~vi~~~~~~~~~~v~~~~~g~g~D~vid~ 264 (363)
T 3uog_A 196 QG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR---------AFALGA-DHGINRLEEDWVERVYALTGDRGADHILEI 264 (363)
T ss_dssp ES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHTC-SEEEETTTSCHHHHHHHHHTTCCEEEEEEE
T ss_pred EC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH---------HHHcCC-CEEEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence 36 8999999999999999999999987655211 111111 1222211122 3345555555589999999
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEec
Q 029198 80 NGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+| .......++.++...+++.++.
T Consensus 265 ~g--~~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 265 AG--GAGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp TT--SSCHHHHHHHEEEEEEEEEECC
T ss_pred CC--hHHHHHHHHHhhcCCEEEEEec
Confidence 98 3567778888884457887764
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.028 Score=42.76 Aligned_cols=84 Identities=12% Similarity=0.123 Sum_probs=54.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|++|++.+|++.... .+ .. ... .+++.++++ .+|+|+.+.-.
T Consensus 144 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-~~------------~~--~~~-----~~~l~ell~--~aDvV~l~lPl 201 (324)
T 3evt_A 144 GTGQIGQSLAAKASALGMHVIGVNTTGHPAD-HF------------HE--TVA-----FTATADALA--TANFIVNALPL 201 (324)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSCCCCT-TC------------SE--EEE-----GGGCHHHHH--HCSEEEECCCC
T ss_pred CcCHHHHHHHHHHHhCCCEEEEECCCcchhH-hH------------hh--ccc-----cCCHHHHHh--hCCEEEEcCCC
Confidence 6799999999999999999999999865521 11 01 111 223455666 78888866543
Q ss_pred Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+.. + ....+..|+.-.-+|++|...+
T Consensus 202 t~~t~~li~~~~l~~mk~gailIN~aRG~~ 231 (324)
T 3evt_A 202 TPTTHHLFSTELFQQTKQQPMLINIGRGPA 231 (324)
T ss_dssp CGGGTTCBSHHHHHTCCSCCEEEECSCGGG
T ss_pred chHHHHhcCHHHHhcCCCCCEEEEcCCChh
Confidence 211 1 2456666764457788876554
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0087 Score=46.55 Aligned_cols=90 Identities=12% Similarity=0.113 Sum_probs=60.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
+|+ |.+|..+++.+...|.+|++++|++++... ..+ ....+ ..+..+.+++.+++. ++|+||.+
T Consensus 174 iG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~---------~~~~~g~~~---~~~~~~~~~l~~~l~--~aDvVi~~ 238 (377)
T 2vhw_A 174 IGA-GTAGYNAARIANGMGATVTVLDINIDKLRQ---------LDAEFCGRI---HTRYSSAYELEGAVK--RADLVIGA 238 (377)
T ss_dssp ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHTTTSS---EEEECCHHHHHHHHH--HCSEEEEC
T ss_pred ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH---------HHHhcCCee---EeccCCHHHHHHHHc--CCCEEEEC
Confidence 365 999999999999999999999998654211 011 11111 123345666777777 89999998
Q ss_pred cCCCcc-----chHHHHHhCCCCCcEEEEec
Q 029198 80 NGREAD-----EVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 80 a~~~~~-----~~~~ll~~~~~~~~~v~~Ss 105 (197)
++.... -.+..++.++.-..+|.+++
T Consensus 239 ~~~p~~~t~~li~~~~l~~mk~g~~iV~va~ 269 (377)
T 2vhw_A 239 VLVPGAKAPKLVSNSLVAHMKPGAVLVDIAI 269 (377)
T ss_dssp CCCTTSCCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred CCcCCCCCcceecHHHHhcCCCCcEEEEEec
Confidence 764321 14667777874457888884
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=96.00 E-value=0.0059 Score=46.82 Aligned_cols=91 Identities=13% Similarity=0.084 Sum_probs=58.1
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~v 76 (197)
+|| |.+|...+..+...|. +|+++++++++... ..+... -.. .|..+. +.+.++....++|+|
T Consensus 174 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~---------~~~~Ga-~~~--~~~~~~~~~~~v~~~~~g~g~D~v 240 (348)
T 2d8a_A 174 TGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRREL---------AKKVGA-DYV--INPFEEDVVKEVMDITDGNGVDVF 240 (348)
T ss_dssp ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHH---------HHHHTC-SEE--ECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH---------HHHhCC-CEE--ECCCCcCHHHHHHHHcCCCCCCEE
Confidence 478 9999999999999998 99999997654210 111111 112 244432 234444333479999
Q ss_pred EeccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 77 YDINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
|++++. .......++.++...+++.+++
T Consensus 241 id~~g~-~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 241 LEFSGA-PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EECSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCCC-HHHHHHHHHHHhcCCEEEEEcc
Confidence 999874 2345667777773357887765
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=95.96 E-value=0.0073 Score=46.26 Aligned_cols=90 Identities=17% Similarity=0.344 Sum_probs=57.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~~ 79 (197)
+||+|.+|...+..+...|.+|+++ +++++.. ...+. +...+. +-.+ .+.+.+.....++|+||++
T Consensus 157 ~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~---------~~~~l--Ga~~i~-~~~~~~~~~~~~~~~~g~D~vid~ 223 (343)
T 3gaz_A 157 QGGGGGVGHVAIQIALARGARVFAT-ARGSDLE---------YVRDL--GATPID-ASREPEDYAAEHTAGQGFDLVYDT 223 (343)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHH---------HHHHH--TSEEEE-TTSCHHHHHHHHHTTSCEEEEEES
T ss_pred ecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHH---------HHHHc--CCCEec-cCCCHHHHHHHHhcCCCceEEEEC
Confidence 4889999999999999999999998 5544311 11111 222222 2222 2344444444589999999
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEec
Q 029198 80 NGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
++. ......++.++...+++.++.
T Consensus 224 ~g~--~~~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 224 LGG--PVLDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp SCT--HHHHHHHHHEEEEEEEEESCC
T ss_pred CCc--HHHHHHHHHHhcCCeEEEEcc
Confidence 984 456667777773357776654
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.94 E-value=0.014 Score=43.78 Aligned_cols=29 Identities=24% Similarity=0.450 Sum_probs=26.4
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCC
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKA 30 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~ 30 (197)
||+|.+|..++..|.+.|++|++++|++.
T Consensus 28 Gg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 28 GGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp TTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred cCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 57999999999999999999999998754
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.92 E-value=0.03 Score=42.95 Aligned_cols=93 Identities=13% Similarity=0.107 Sum_probs=58.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeec--CCCHHHHHhhhh---ccCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD--RKDYDFVKSSLS---AKGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~~~~l~~~~~---~~~~d~ 75 (197)
+|+ |.+|...+..+...|.+|+++++++++... ..+.... ..+..+ -...+.+.+... ..++|+
T Consensus 175 ~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~lGa~-~~~~~~~~~~~~~~i~~~~~~~~g~g~D~ 243 (352)
T 1e3j_A 175 IGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEV---------AKNCGAD-VTLVVDPAKEEESSIIERIRSAIGDLPNV 243 (352)
T ss_dssp ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHTTCS-EEEECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred ECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHH---------HHHhCCC-EEEcCcccccHHHHHHHHhccccCCCCCE
Confidence 365 899999999988899999999987655211 1111112 222211 122345555443 347999
Q ss_pred EEeccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 76 VYDINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 76 vi~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
||++++.. ......++.++...+++.++.
T Consensus 244 vid~~g~~-~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 244 TIDCSGNE-KCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp EEECSCCH-HHHHHHHHHSCTTCEEEECSC
T ss_pred EEECCCCH-HHHHHHHHHHhcCCEEEEEec
Confidence 99998752 345677788884457887653
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.014 Score=43.74 Aligned_cols=81 Identities=16% Similarity=0.041 Sum_probs=52.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|++|++.+|++.... .+. ..+++.++++ .+|+|+.+.-.
T Consensus 129 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------------~~~-------~~~~l~ell~--~aDiV~l~~P~ 183 (290)
T 3gvx_A 129 GYGGIGRRVAHLAKAFGMRVIAYTRSSVDQN----------------VDV-------ISESPADLFR--QSDFVLIAIPL 183 (290)
T ss_dssp CCSHHHHHHHHHHHHHTCEEEEECSSCCCTT----------------CSE-------ECSSHHHHHH--HCSEEEECCCC
T ss_pred ccCchhHHHHHHHHhhCcEEEEEeccccccc----------------ccc-------ccCChHHHhh--ccCeEEEEeec
Confidence 5799999999999999999999999866521 111 1123455566 77888866543
Q ss_pred Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+.. . ....+..|+.-.-+|.+|+..+
T Consensus 184 t~~t~~li~~~~l~~mk~gailIN~aRG~~ 213 (290)
T 3gvx_A 184 TDKTRGMVNSRLLANARKNLTIVNVARADV 213 (290)
T ss_dssp CTTTTTCBSHHHHTTCCTTCEEEECSCGGG
T ss_pred cccchhhhhHHHHhhhhcCceEEEeehhcc
Confidence 211 1 2455666664457777776554
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=95.76 E-value=0.012 Score=45.04 Aligned_cols=27 Identities=26% Similarity=0.384 Sum_probs=21.6
Q ss_pred CCcccchHHHHHHHHHHCCC---eEEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTR 27 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~---~V~~~~r 27 (197)
+||||++|+.+++.|.++++ +++++..
T Consensus 12 iGAtG~iG~~llr~L~~~~~~~~elv~i~s 41 (340)
T 2hjs_A 12 VGATGSVGEALVGLLDERDFPLHRLHLLAS 41 (340)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred ECCCCHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 48999999999999997754 5666653
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.01 Score=45.49 Aligned_cols=90 Identities=11% Similarity=0.125 Sum_probs=56.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC--HHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~l~~~~~~~~~d~vi~ 78 (197)
+||+|.+|...+..+...|.+|+++++++++.. ...+... -..+ |..+ .+.+.++ ...++|+||+
T Consensus 157 ~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~---------~~~~lGa-~~vi--~~~~~~~~~~~~~-~~~g~Dvv~d 223 (346)
T 3fbg_A 157 INGAGGVGSIATQIAKAYGLRVITTASRNETIE---------WTKKMGA-DIVL--NHKESLLNQFKTQ-GIELVDYVFC 223 (346)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHH---------HHHHHTC-SEEE--CTTSCHHHHHHHH-TCCCEEEEEE
T ss_pred EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH---------HHHhcCC-cEEE--ECCccHHHHHHHh-CCCCccEEEE
Confidence 489999999999999999999999998765421 1111111 1222 2222 2334444 3357999999
Q ss_pred ccCCCccchHHHHHhCCCCCcEEEEe
Q 029198 79 INGREADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
+++.. ......++.++...+++.++
T Consensus 224 ~~g~~-~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 224 TFNTD-MYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp SSCHH-HHHHHHHHHEEEEEEEEESS
T ss_pred CCCch-HHHHHHHHHhccCCEEEEEC
Confidence 98742 23466677777335676554
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=95.67 E-value=0.033 Score=42.39 Aligned_cols=84 Identities=14% Similarity=0.091 Sum_probs=54.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|++|++.+|++.... .. .. . ....++.++++ ..|+|+.+.-.
T Consensus 147 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-~~------------~~--~-----~~~~~l~ell~--~aDvV~l~lPl 204 (324)
T 3hg7_A 147 GTGSIGQHIAHTGKHFGMKVLGVSRSGRERA-GF------------DQ--V-----YQLPALNKMLA--QADVIVSVLPA 204 (324)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCCCT-TC------------SE--E-----ECGGGHHHHHH--TCSEEEECCCC
T ss_pred EECHHHHHHHHHHHhCCCEEEEEcCChHHhh-hh------------hc--c-----cccCCHHHHHh--hCCEEEEeCCC
Confidence 6799999999999999999999999864421 10 00 1 12345667777 89998876543
Q ss_pred CccchHH-----HHHhCCCCCcEEEEecceec
Q 029198 83 EADEVEP-----ILDALPNLEQFIYCSSAGVY 109 (197)
Q Consensus 83 ~~~~~~~-----ll~~~~~~~~~v~~Ss~~vy 109 (197)
+ ..++. .+..|+.-.-+|++|...+.
T Consensus 205 t-~~T~~li~~~~l~~mk~gailIN~aRG~~v 235 (324)
T 3hg7_A 205 T-RETHHLFTASRFEHCKPGAILFNVGRGNAI 235 (324)
T ss_dssp C-SSSTTSBCTTTTTCSCTTCEEEECSCGGGB
T ss_pred C-HHHHHHhHHHHHhcCCCCcEEEECCCchhh
Confidence 3 22222 33444434577788776653
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.66 E-value=0.027 Score=43.56 Aligned_cols=88 Identities=15% Similarity=0.142 Sum_probs=58.2
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
|+ |.+|...+..+...|.+|+++++++++... ..+.. .. ...|..+.+.+.++.. ++|+||++.+
T Consensus 202 Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~---------a~~lG--a~-~vi~~~~~~~~~~~~~--g~Dvvid~~g 266 (369)
T 1uuf_A 202 GI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA---------AKALG--AD-EVVNSRNADEMAAHLK--SFDFILNTVA 266 (369)
T ss_dssp CC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH---------HHHHT--CS-EEEETTCHHHHHTTTT--CEEEEEECCS
T ss_pred CC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHcC--Cc-EEeccccHHHHHHhhc--CCCEEEECCC
Confidence 65 789999999988899999999987665221 11111 11 1235566665555543 8999999988
Q ss_pred CCccchHHHHHhCCCCCcEEEEec
Q 029198 82 READEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.. ......++.++...+++.++.
T Consensus 267 ~~-~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 267 AP-HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp SC-CCHHHHHTTEEEEEEEEECCC
T ss_pred CH-HHHHHHHHHhccCCEEEEecc
Confidence 53 345667777773347776664
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=95.64 E-value=0.011 Score=45.38 Aligned_cols=92 Identities=14% Similarity=0.187 Sum_probs=56.6
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHH---HHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---l~~~~~~~~~d~v 76 (197)
+||+|.+|..++..+... |.+|+++++++++... ..+.... . ..|..+.+. +.++....++|+|
T Consensus 177 ~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~---------~~~~g~~-~--~~~~~~~~~~~~~~~~~~~~~~d~v 244 (347)
T 1jvb_A 177 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA---------AKRAGAD-Y--VINASMQDPLAEIRRITESKGVDAV 244 (347)
T ss_dssp ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH---------HHHHTCS-E--EEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred ECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHH---------HHHhCCC-E--EecCCCccHHHHHHHHhcCCCceEE
Confidence 588889999999999999 9999999987654211 1111111 1 134444333 4444321279999
Q ss_pred EeccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 77 YDINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
|++++.. ......++.++...+++.++.
T Consensus 245 i~~~g~~-~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 245 IDLNNSE-KTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp EESCCCH-HHHTTGGGGEEEEEEEEECCS
T ss_pred EECCCCH-HHHHHHHHHHhcCCEEEEECC
Confidence 9999842 234445555553347776654
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=95.64 E-value=0.035 Score=41.90 Aligned_cols=27 Identities=15% Similarity=0.219 Sum_probs=24.6
Q ss_pred ccchHHHHHHHHHHCCCeEEEEecCCC
Q 029198 4 TRFIGVFLSRLLVKEGHQVTLFTRGKA 30 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~V~~~~r~~~ 30 (197)
||..|.+++++++++|++|+.+.+...
T Consensus 64 SGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 64 SGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 499999999999999999999999643
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.62 E-value=0.017 Score=44.43 Aligned_cols=89 Identities=10% Similarity=-0.017 Sum_probs=49.8
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
.||||++|+.+++.|.+... +++++.+..... ..+.... ..+ .+.. ...+.+.+ + +. ++|+||.+
T Consensus 10 iGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g-~~~~~~~-~~~----~g~~--~~~~~~~~---~-~~--~vDvV~~a 75 (345)
T 2ozp_A 10 VGASGYAGGEFLRLALSHPYLEVKQVTSRRFAG-EPVHFVH-PNL----RGRT--NLKFVPPE---K-LE--PADILVLA 75 (345)
T ss_dssp ETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTT-SBGGGTC-GGG----TTTC--CCBCBCGG---G-CC--CCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHcCCCcEEEEEECchhhC-chhHHhC-chh----cCcc--cccccchh---H-hc--CCCEEEEc
Confidence 48999999999999988764 888887744331 1111000 000 0000 11122322 2 34 89999998
Q ss_pred cCCCccchHHHH-HhCC-CCCcEEEEecc
Q 029198 80 NGREADEVEPIL-DALP-NLEQFIYCSSA 106 (197)
Q Consensus 80 a~~~~~~~~~ll-~~~~-~~~~~v~~Ss~ 106 (197)
.+.. ....+. .+++ +. ++|-.|+.
T Consensus 76 ~g~~--~s~~~a~~~~~aG~-~VId~Sa~ 101 (345)
T 2ozp_A 76 LPHG--VFAREFDRYSALAP-VLVDLSAD 101 (345)
T ss_dssp CCTT--HHHHTHHHHHTTCS-EEEECSST
T ss_pred CCcH--HHHHHHHHHHHCCC-EEEEcCcc
Confidence 8754 233333 3334 54 68888873
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=95.60 E-value=0.011 Score=44.42 Aligned_cols=93 Identities=11% Similarity=0.069 Sum_probs=57.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCC--CCchhhhhccCceEEEeecCCCHHHHHhhhhcc--------C
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------G 72 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~--------~ 72 (197)
|.|.+|..+++.|++.||+|++.+|++++....... .......+......++..-+.+.+.+++++... .
T Consensus 10 GlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~ 89 (300)
T 3obb_A 10 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP 89 (300)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC
T ss_pred eehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCC
Confidence 579999999999999999999999987664321110 000111122233445555567777777765421 1
Q ss_pred ccEEEeccCCCccchHHHHHhCC
Q 029198 73 FDVVYDINGREADEVEPILDALP 95 (197)
Q Consensus 73 ~d~vi~~a~~~~~~~~~ll~~~~ 95 (197)
=++||++.......++.+-+.++
T Consensus 90 g~iiId~sT~~p~~~~~~a~~~~ 112 (300)
T 3obb_A 90 GTLVLECSTIAPTSARKIHAAAR 112 (300)
T ss_dssp -CEEEECSCCCHHHHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHH
Confidence 25677777766666666666555
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=95.60 E-value=0.0083 Score=45.43 Aligned_cols=90 Identities=17% Similarity=0.192 Sum_probs=57.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+||+|.+|...+..+...|.+|+++++++++.. ...+.... ..+ |..+.+.++ .+...++|++|++.
T Consensus 153 ~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~---------~~~~lGa~-~vi--~~~~~~~~~-~~~~~~~d~v~d~~ 219 (324)
T 3nx4_A 153 TGASGGVGSTAVALLHKLGYQVAAVSGRESTHG---------YLKSLGAN-RIL--SRDEFAESR-PLEKQLWAGAIDTV 219 (324)
T ss_dssp SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH---------HHHHHTCS-EEE--EGGGSSCCC-SSCCCCEEEEEESS
T ss_pred ECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH---------HHHhcCCC-EEE--ecCCHHHHH-hhcCCCccEEEECC
Confidence 589999999999999999999999999876532 11111111 122 222222222 22224799999998
Q ss_pred CCCccchHHHHHhCCCCCcEEEEec
Q 029198 81 GREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+. ......++.++...+++.++.
T Consensus 220 g~--~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 220 GD--KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp CH--HHHHHHHHTEEEEEEEEECCC
T ss_pred Cc--HHHHHHHHHHhcCCEEEEEec
Confidence 74 355666777764457777654
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.57 E-value=0.017 Score=44.64 Aligned_cols=90 Identities=11% Similarity=0.126 Sum_probs=55.9
Q ss_pred CCcccchHHHHHHHHHH-CCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC--HHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~l~~~~~~~~~d~vi 77 (197)
+||+|.+|...+..+.. .|.+|+++++++++... ..+.... ..+ |..+ .+.+.++ ...++|+||
T Consensus 178 ~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~---------~~~lGad-~vi--~~~~~~~~~v~~~-~~~g~Dvvi 244 (363)
T 4dvj_A 178 VGGAGGVGSIAVQIARQRTDLTVIATASRPETQEW---------VKSLGAH-HVI--DHSKPLAAEVAAL-GLGAPAFVF 244 (363)
T ss_dssp ESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHH---------HHHTTCS-EEE--CTTSCHHHHHHTT-CSCCEEEEE
T ss_pred ECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH---------HHHcCCC-EEE--eCCCCHHHHHHHh-cCCCceEEE
Confidence 47899999988887766 58999999997654211 1111111 222 2222 2334433 334899999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEe
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
++.+.. ......++.++...+++.++
T Consensus 245 d~~g~~-~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 245 STTHTD-KHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp ECSCHH-HHHHHHHHHSCTTCEEEECS
T ss_pred ECCCch-hhHHHHHHHhcCCCEEEEEC
Confidence 998742 34567778888446777664
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=95.57 E-value=0.0025 Score=50.60 Aligned_cols=30 Identities=23% Similarity=0.387 Sum_probs=27.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|+|++|..++..|++.|++|++++|++++.
T Consensus 7 G~G~vG~~~A~~la~~G~~V~~~d~~~~~~ 36 (436)
T 1mv8_A 7 GLGYVGAVCAGCLSARGHEVIGVDVSSTKI 36 (436)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 579999999999999999999999986653
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=95.55 E-value=0.0087 Score=42.36 Aligned_cols=31 Identities=29% Similarity=0.418 Sum_probs=27.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
+||+|.+|+.++..|++.|++|++++|+++.
T Consensus 6 iGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~ 36 (212)
T 1jay_A 6 LGGTGNLGKGLALRLATLGHEIVVGSRREEK 36 (212)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred EcCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 4789999999999999999999999997654
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=95.54 E-value=0.0042 Score=47.23 Aligned_cols=90 Identities=18% Similarity=0.205 Sum_probs=54.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHH--HHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD--FVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~l~~~~~~~~~d~vi~ 78 (197)
+||+|.+|...+..+...|.+|+++++++++... ..+.... ..+ |..+.+ .+.+ +...++|+||+
T Consensus 157 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~---------~~~lGa~-~v~--~~~~~~~~~~~~-~~~~~~d~vid 223 (330)
T 1tt7_A 157 TGATGGVGGIAVSMLNKRGYDVVASTGNREAADY---------LKQLGAS-EVI--SREDVYDGTLKA-LSKQQWQGAVD 223 (330)
T ss_dssp ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH---------HHHHTCS-EEE--EHHHHCSSCCCS-SCCCCEEEEEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHcCCc-EEE--ECCCchHHHHHH-hhcCCccEEEE
Confidence 4889999999999998899999999998665211 1111111 122 222211 0111 12237999999
Q ss_pred ccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 79 INGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+++. ......++.++...+++.++.
T Consensus 224 ~~g~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 224 PVGG--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp SCCT--HHHHHHHTTEEEEEEEEECCC
T ss_pred CCcH--HHHHHHHHhhcCCCEEEEEec
Confidence 9985 345556666663347776653
|
| >2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.038 Score=41.76 Aligned_cols=79 Identities=16% Similarity=0.098 Sum_probs=51.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|++|++.+|+.++.. .+.. ++.++++ .+|+|+.+.-.
T Consensus 151 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~----------------------~~~~---~l~ell~--~aDvV~l~~p~ 203 (311)
T 2cuk_A 151 GMGRIGQAVAKRALAFGMRVVYHARTPKPLP----------------------YPFL---SLEELLK--EADVVSLHTPL 203 (311)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCSSS----------------------SCBC---CHHHHHH--HCSEEEECCCC
T ss_pred EECHHHHHHHHHHHHCCCEEEEECCCCcccc----------------------cccC---CHHHHHh--hCCEEEEeCCC
Confidence 5799999999999999999999999766511 1122 2445555 77888866433
Q ss_pred Cc--cc--hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EA--DE--VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~--~~--~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+. .. .+..+..++.-..+|.+|+..+
T Consensus 204 ~~~t~~li~~~~l~~mk~ga~lin~srg~~ 233 (311)
T 2cuk_A 204 TPETHRLLNRERLFAMKRGAILLNTARGAL 233 (311)
T ss_dssp CTTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred ChHHHhhcCHHHHhhCCCCcEEEECCCCCc
Confidence 21 11 1235555554456777777554
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.43 E-value=0.013 Score=45.22 Aligned_cols=30 Identities=23% Similarity=0.393 Sum_probs=27.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|.|.+|..++..|++.|++|++.+|++++.
T Consensus 29 GlG~mG~~~A~~L~~~G~~V~v~dr~~~~~ 58 (358)
T 4e21_A 29 GLGRMGADMVRRLRKGGHECVVYDLNVNAV 58 (358)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CchHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence 579999999999999999999999987653
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=95.41 E-value=0.0071 Score=45.68 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=27.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|+|.+|..++..|++.|++|++.+|++++.
T Consensus 28 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~ 57 (310)
T 3doj_A 28 GLGIMGKAMSMNLLKNGFKVTVWNRTLSKC 57 (310)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSGGGG
T ss_pred CccHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 579999999999999999999999987764
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=95.36 E-value=0.0055 Score=45.42 Aligned_cols=30 Identities=17% Similarity=0.022 Sum_probs=26.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
+|+ |.+|.+++..|++.|++|++.+|+.++
T Consensus 125 iGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~ 154 (271)
T 1nyt_A 125 IGA-GGASRGVLLPLLSLDCAVTITNRTVSR 154 (271)
T ss_dssp ECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred ECC-cHHHHHHHHHHHHcCCEEEEEECCHHH
Confidence 476 789999999999999999999998654
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=95.35 E-value=0.0062 Score=47.13 Aligned_cols=27 Identities=15% Similarity=0.358 Sum_probs=21.5
Q ss_pred CCcccchHHHHHHHHHHCCC---eEEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTR 27 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~---~V~~~~r 27 (197)
+||||++|..|++.|.++++ ++..++.
T Consensus 8 vGATG~vG~eLlrlL~~~~~p~~el~~~as 37 (366)
T 3pwk_A 8 VGATGAVGAQMIKMLEESTLPIDKIRYLAS 37 (366)
T ss_dssp ETTTSHHHHHHHHHHHTCCCCEEEEEEEEC
T ss_pred ECCCChHHHHHHHHHhcCCCCcEEEEEEEc
Confidence 49999999999999988765 4555553
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.35 E-value=0.02 Score=44.88 Aligned_cols=92 Identities=15% Similarity=0.123 Sum_probs=57.1
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC---HHHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~l~~~~~~~~~d~v 76 (197)
+|| |.+|...+..+...|. +|+++++++++... ..+. ..-..+ |..+ .+.+.++....++|+|
T Consensus 220 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~---------~~~l-Ga~~vi--~~~~~~~~~~i~~~t~g~g~D~v 286 (404)
T 3ip1_A 220 LGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNL---------AKEL-GADHVI--DPTKENFVEAVLDYTNGLGAKLF 286 (404)
T ss_dssp ECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH---------HHHH-TCSEEE--CTTTSCHHHHHHHHTTTCCCSEE
T ss_pred ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH---------HHHc-CCCEEE--cCCCCCHHHHHHHHhCCCCCCEE
Confidence 366 9999999999988998 89999887655210 1111 111222 3333 2345555554579999
Q ss_pred EeccCCCccchHHHHHhC----CCCCcEEEEec
Q 029198 77 YDINGREADEVEPILDAL----PNLEQFIYCSS 105 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~----~~~~~~v~~Ss 105 (197)
|.+.|........+++.+ +...+++.++.
T Consensus 287 id~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 287 LEATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp EECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred EECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 999986422344555555 64457777664
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=95.34 E-value=0.021 Score=43.61 Aligned_cols=89 Identities=10% Similarity=0.042 Sum_probs=57.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
+|| |.+|...+..+...|.+|+++++++++... ..+. +... ..|..+. +.+.++. .++|+||
T Consensus 171 ~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~l--Ga~~-~~d~~~~~~~~~~~~~~--~~~d~vi 235 (339)
T 1rjw_A 171 YGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL---------AKEL--GADL-VVNPLKEDAAKFMKEKV--GGVHAAV 235 (339)
T ss_dssp ECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH---------HHHT--TCSE-EECTTTSCHHHHHHHHH--SSEEEEE
T ss_pred ECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHHC--CCCE-EecCCCccHHHHHHHHh--CCCCEEE
Confidence 477 779999999999999999999997655221 1111 1111 2355443 2333333 3899999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
++++. .......++.++...+++.+++
T Consensus 236 d~~g~-~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 236 VTAVS-KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp ESSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred ECCCC-HHHHHHHHHHhhcCCEEEEecc
Confidence 99874 2345667777773347777664
|
| >1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=95.33 E-value=0.053 Score=40.81 Aligned_cols=80 Identities=19% Similarity=0.158 Sum_probs=50.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|++|++.+|++.. . . . ....++.+++. .+|+|+.+.-.
T Consensus 131 G~G~IG~~~A~~l~~~G~~V~~~dr~~~~-~---~-------------~-------~~~~~l~ell~--~aDvV~l~~P~ 184 (303)
T 1qp8_A 131 GLGEIGTRVGKILAALGAQVRGFSRTPKE-G---P-------------W-------RFTNSLEEALR--EARAAVCALPL 184 (303)
T ss_dssp SCSTHHHHHHHHHHHTTCEEEEECSSCCC-S---S-------------S-------CCBSCSHHHHT--TCSEEEECCCC
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCccc-c---C-------------c-------ccCCCHHHHHh--hCCEEEEeCcC
Confidence 57999999999999999999999987652 1 0 0 01112345555 77888766533
Q ss_pred Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+.. + .+..+..++.-.-+|.+|+..+
T Consensus 185 ~~~t~~~i~~~~l~~mk~gailin~srg~~ 214 (303)
T 1qp8_A 185 NKHTRGLVKYQHLALMAEDAVFVNVGRAEV 214 (303)
T ss_dssp STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred chHHHHHhCHHHHhhCCCCCEEEECCCCcc
Confidence 211 1 1345555664456777777554
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=95.29 E-value=0.023 Score=43.84 Aligned_cols=91 Identities=23% Similarity=0.316 Sum_probs=50.8
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
.||+|++|+.+++.|.+... +++++.+..+.. ..+. .........+ ..|+.-.+ .+.++ ++|+||.|
T Consensus 22 iGAtG~iG~~llr~L~~~p~~elvai~~~~~~g-~~~~----~~~~~~~~~v---~~dl~~~~--~~~~~--~vDvVf~a 89 (359)
T 1xyg_A 22 LGASGYTGAEIVRLLANHPHFQVTLMTADRKAG-QSME----SVFPHLRAQK---LPTLVSVK--DADFS--TVDAVFCC 89 (359)
T ss_dssp ECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT-SCHH----HHCGGGTTSC---CCCCBCGG--GCCGG--GCSEEEEC
T ss_pred ECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC-CCHH----HhCchhcCcc---cccceecc--hhHhc--CCCEEEEc
Confidence 48999999999999998864 888887653321 1100 0000000111 12333222 33444 89999988
Q ss_pred cCCCccchHHHHHhCC-CCCcEEEEecc
Q 029198 80 NGREADEVEPILDALP-NLEQFIYCSSA 106 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~-~~~~~v~~Ss~ 106 (197)
.+.. ...+..-.+ + +. ++|-.|+.
T Consensus 90 tp~~-~s~~~a~~~-~aG~-~VId~sa~ 114 (359)
T 1xyg_A 90 LPHG-TTQEIIKEL-PTAL-KIVDLSAD 114 (359)
T ss_dssp CCTT-THHHHHHTS-CTTC-EEEECSST
T ss_pred CCch-hHHHHHHHH-hCCC-EEEECCcc
Confidence 8653 223333344 6 54 67777773
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.12 Score=37.69 Aligned_cols=95 Identities=14% Similarity=0.182 Sum_probs=59.0
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhh---hccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL---SAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~---~~~~~d~v 76 (197)
+|++|.+|+.+++.+.+. ++++++......... .+.. .... +..|++.++...+.+ .+.+.+.|
T Consensus 6 ~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~---------~~~~--~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~V 73 (245)
T 1p9l_A 6 LGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLS---------LLTD--GNTE-VVIDFTHPDVVMGNLEFLIDNGIHAV 73 (245)
T ss_dssp ETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTH---------HHHH--TTCC-EEEECSCTTTHHHHHHHHHHTTCEEE
T ss_pred ECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHH---------HHhc--cCCc-EEEEccChHHHHHHHHHHHHcCCCEE
Confidence 488999999999999876 899987776543211 1111 1222 556777766555433 23589999
Q ss_pred EeccCCCccchHHHHHhCC-C-CCcEEEEecce
Q 029198 77 YDINGREADEVEPILDALP-N-LEQFIYCSSAG 107 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~-~-~~~~v~~Ss~~ 107 (197)
+-..|.+......+-++++ . ...+++.+.++
T Consensus 74 igTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~s 106 (245)
T 1p9l_A 74 VGTTGFTAERFQQVESWLVAKPNTSVLIAPNFA 106 (245)
T ss_dssp ECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCC
T ss_pred EcCCCCCHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence 9888766544445555555 3 34566666544
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.022 Score=43.55 Aligned_cols=89 Identities=13% Similarity=0.098 Sum_probs=56.8
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~v 76 (197)
+|| |.+|...+..+...|. +|+++++++++.. .... . .-. ..|..+. +.+.++. ..++|+|
T Consensus 171 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~-~~~~---------l-a~~--v~~~~~~~~~~~~~~~~-~~g~D~v 235 (343)
T 2dq4_A 171 TGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA-FARP---------Y-ADR--LVNPLEEDLLEVVRRVT-GSGVEVL 235 (343)
T ss_dssp ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG-GGTT---------T-CSE--EECTTTSCHHHHHHHHH-SSCEEEE
T ss_pred ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHH---------h-HHh--ccCcCccCHHHHHHHhc-CCCCCEE
Confidence 478 9999999999988998 9999999765522 1110 0 011 1344432 2333333 4589999
Q ss_pred EeccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 77 YDINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
|++++. ....+..++.++...+++.++.
T Consensus 236 id~~g~-~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 236 LEFSGN-EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EECSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCCC-HHHHHHHHHHHhcCCEEEEEec
Confidence 999974 2345667777773347777664
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=95.22 E-value=0.026 Score=41.91 Aligned_cols=60 Identities=15% Similarity=0.098 Sum_probs=42.7
Q ss_pred ccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
+|.+|++++..|.+.|. +|++..|+.++...... ++.. ...+++.+++. .+|+||++...
T Consensus 125 aGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~------------~~~~-----~~~~~~~~~~~--~aDiVInaTp~ 185 (277)
T 3don_A 125 AGGASKGIANELYKIVRPTLTVANRTMSRFNNWSL------------NINK-----INLSHAESHLD--EFDIIINTTPA 185 (277)
T ss_dssp CSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS------------CCEE-----ECHHHHHHTGG--GCSEEEECCC-
T ss_pred CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH------------hccc-----ccHhhHHHHhc--CCCEEEECccC
Confidence 48999999999999998 99999999776432221 1221 13455666666 89999998654
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=95.21 E-value=0.0098 Score=42.41 Aligned_cols=29 Identities=24% Similarity=0.245 Sum_probs=26.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|.+|..++..|.+.|++|++++|+++.
T Consensus 35 G~G~~G~~la~~l~~~g~~V~~~~r~~~~ 63 (215)
T 2vns_A 35 GSGDFARSLATRLVGSGFKVVVGSRNPKR 63 (215)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESSHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 38999999999999999999999998654
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=95.20 E-value=0.0065 Score=48.43 Aligned_cols=30 Identities=17% Similarity=0.383 Sum_probs=27.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|+|++|..++..|++.|++|+++++++++.
T Consensus 9 G~G~vG~~lA~~La~~G~~V~~~D~~~~~v 38 (450)
T 3gg2_A 9 GIGYVGLVSATCFAELGANVRCIDTDRNKI 38 (450)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CcCHHHHHHHHHHHhcCCEEEEEECCHHHH
Confidence 579999999999999999999999987653
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=95.18 E-value=0.035 Score=42.68 Aligned_cols=89 Identities=18% Similarity=0.175 Sum_probs=58.4
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
| +|.+|...+..+...|.+|+++++++++...... +.... .. .|..+.+.+.++.. ++|+||++++
T Consensus 188 G-aG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~--------~lGa~-~v--i~~~~~~~~~~~~~--g~D~vid~~g 253 (357)
T 2cf5_A 188 G-LGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ--------DLGAD-DY--VIGSDQAKMSELAD--SLDYVIDTVP 253 (357)
T ss_dssp C-CSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT--------TSCCS-CE--EETTCHHHHHHSTT--TEEEEEECCC
T ss_pred C-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH--------HcCCc-ee--eccccHHHHHHhcC--CCCEEEECCC
Confidence 6 4899999999888889999999998765321100 11111 11 34556666666554 8999999998
Q ss_pred CCccchHHHHHhCCCCCcEEEEec
Q 029198 82 READEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.. ......++.++...+++.++.
T Consensus 254 ~~-~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 254 VH-HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp SC-CCSHHHHTTEEEEEEEEECSC
T ss_pred Ch-HHHHHHHHHhccCCEEEEeCC
Confidence 53 345667777773357776664
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.13 E-value=0.023 Score=44.15 Aligned_cols=91 Identities=14% Similarity=0.176 Sum_probs=56.9
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCC---CHH---HHHhhhhccCc
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK---DYD---FVKSSLSAKGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~~---~l~~~~~~~~~ 73 (197)
+| +|.+|...+..+...| .+|+++++++++... ..+... -..+ |.. +.+ .+.++....++
T Consensus 202 ~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~---------~~~lGa-~~vi--~~~~~~~~~~~~~v~~~~~g~g~ 268 (380)
T 1vj0_A 202 QG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKL---------AEEIGA-DLTL--NRRETSVEERRKAIMDITHGRGA 268 (380)
T ss_dssp EC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHH---------HHHTTC-SEEE--ETTTSCHHHHHHHHHHHTTTSCE
T ss_pred EC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHH---------HHHcCC-cEEE--eccccCcchHHHHHHHHhCCCCC
Confidence 36 7999999999998899 699999988655211 111111 1222 333 222 23333333479
Q ss_pred cEEEeccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 74 DVVYDINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 74 d~vi~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
|+||++++.. ......++.++...+++.++.
T Consensus 269 Dvvid~~g~~-~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 269 DFILEATGDS-RALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp EEEEECSSCT-THHHHHHHHEEEEEEEEECCC
T ss_pred cEEEECCCCH-HHHHHHHHHHhcCCEEEEEec
Confidence 9999999742 356677777773357777664
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=95.13 E-value=0.018 Score=44.34 Aligned_cols=90 Identities=11% Similarity=0.044 Sum_probs=55.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH-HHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~l~~~~~~~~~d~vi~~ 79 (197)
+|| |.+|...+..+...|.+|+++++++++... ..+... -.. .|..+. +..+++. .++|+||++
T Consensus 186 ~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~---------~~~lGa-~~v--~~~~~~~~~~~~~~--~~~D~vid~ 250 (360)
T 1piw_A 186 VGL-GGIGSMGTLISKAMGAETYVISRSSRKRED---------AMKMGA-DHY--IATLEEGDWGEKYF--DTFDLIVVC 250 (360)
T ss_dssp ECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH---------HHHHTC-SEE--EEGGGTSCHHHHSC--SCEEEEEEC
T ss_pred ECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHH---------HHHcCC-CEE--EcCcCchHHHHHhh--cCCCEEEEC
Confidence 477 999999999888889999999998776321 111111 112 244433 3333333 389999999
Q ss_pred cCCC-ccchHHHHHhCCCCCcEEEEec
Q 029198 80 NGRE-ADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 80 a~~~-~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.+.. .......++.++...+++.++.
T Consensus 251 ~g~~~~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 251 ASSLTDIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp CSCSTTCCTTTGGGGEEEEEEEEECCC
T ss_pred CCCCcHHHHHHHHHHhcCCCEEEEecC
Confidence 8751 1334555666663346776654
|
| >2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* | Back alignment and structure |
|---|
Probab=95.13 E-value=0.08 Score=40.59 Aligned_cols=82 Identities=16% Similarity=0.170 Sum_probs=54.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|.+|++.+|++.... . ..+.+ . ++.++++ ..|+|+.+.-.
T Consensus 155 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~-----------~~~~~-----~---~l~ell~--~aDvV~l~~Pl 210 (343)
T 2yq5_A 155 GVGHIGSAVAEIFSAMGAKVIAYDVAYNPEF---E-----------PFLTY-----T---DFDTVLK--EADIVSLHTPL 210 (343)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCGGG---T-----------TTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred ecCHHHHHHHHHHhhCCCEEEEECCChhhhh---h-----------ccccc-----c---CHHHHHh--cCCEEEEcCCC
Confidence 5799999999999999999999999875411 0 11111 1 3455666 78888866543
Q ss_pred Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+.. . ....+..|+.-.-+|++|...+
T Consensus 211 t~~t~~li~~~~l~~mk~gailIN~aRg~~ 240 (343)
T 2yq5_A 211 FPSTENMIGEKQLKEMKKSAYLINCARGEL 240 (343)
T ss_dssp CTTTTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred CHHHHHHhhHHHHhhCCCCcEEEECCCChh
Confidence 211 1 2456677774457888887654
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.12 E-value=0.036 Score=42.43 Aligned_cols=81 Identities=16% Similarity=0.073 Sum_probs=50.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|++|++.+|++.... .... ..++.++++ .+|+|+-+.-.
T Consensus 178 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------------~~~~-------~~sl~ell~--~aDvVil~vP~ 232 (340)
T 4dgs_A 178 GLGQIGRALASRAEAFGMSVRYWNRSTLSGV----------------DWIA-------HQSPVDLAR--DSDVLAVCVAA 232 (340)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECSSCCTTS----------------CCEE-------CSSHHHHHH--TCSEEEECC--
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCccccc----------------Ccee-------cCCHHHHHh--cCCEEEEeCCC
Confidence 5699999999999999999999999865411 1111 123556666 88988866543
Q ss_pred Cccch-----HHHHHhCCCCCcEEEEecceec
Q 029198 83 EADEV-----EPILDALPNLEQFIYCSSAGVY 109 (197)
Q Consensus 83 ~~~~~-----~~ll~~~~~~~~~v~~Ss~~vy 109 (197)
+ ..+ +..+..++.-.-+|.+|...+-
T Consensus 233 t-~~t~~li~~~~l~~mk~gailIN~aRG~vv 263 (340)
T 4dgs_A 233 S-AATQNIVDASLLQALGPEGIVVNVARGNVV 263 (340)
T ss_dssp ---------CHHHHHHTTTTCEEEECSCC---
T ss_pred C-HHHHHHhhHHHHhcCCCCCEEEECCCCccc
Confidence 2 222 3455666644577777776553
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=95.09 E-value=0.073 Score=40.84 Aligned_cols=84 Identities=15% Similarity=0.113 Sum_probs=52.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|.+|++.+|++...... .++.+. +++.++++ ..|+|+.+.-.
T Consensus 180 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-------------~g~~~~-------~~l~ell~--~sDvV~l~~Pl 237 (345)
T 4g2n_A 180 GMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-------------EGAIYH-------DTLDSLLG--ASDIFLIAAPG 237 (345)
T ss_dssp SCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-------------TTCEEC-------SSHHHHHH--TCSEEEECSCC
T ss_pred EeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-------------cCCeEe-------CCHHHHHh--hCCEEEEecCC
Confidence 579999999999999999999999986441100 012111 23455666 77888765543
Q ss_pred Cccc----hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EADE----VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~~~----~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+... .+..+..|+.-.-+|++|...+
T Consensus 238 t~~T~~li~~~~l~~mk~gailIN~aRG~~ 267 (345)
T 4g2n_A 238 RPELKGFLDHDRIAKIPEGAVVINISRGDL 267 (345)
T ss_dssp CGGGTTCBCHHHHHHSCTTEEEEECSCGGG
T ss_pred CHHHHHHhCHHHHhhCCCCcEEEECCCCch
Confidence 3111 2455666664456777776554
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=95.05 E-value=0.064 Score=41.59 Aligned_cols=61 Identities=13% Similarity=0.126 Sum_probs=47.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|.|.+|..+++.+.+.|++|++++..+......+ .-..+..|+.|.+.+.++.+ .+|+|..
T Consensus 19 G~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~-------------ad~~~~~~~~d~~~l~~~~~--~~dvi~~ 79 (377)
T 3orq_A 19 GGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV-------------AHEFIQAKYDDEKALNQLGQ--KCDVITY 79 (377)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG-------------SSEEEECCTTCHHHHHHHHH--HCSEEEE
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhh-------------CCEEEECCCCCHHHHHHHHH--hCCccee
Confidence 4688999999999999999999988765421111 12456689999999999988 6888764
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=95.04 E-value=0.15 Score=38.97 Aligned_cols=96 Identities=15% Similarity=0.229 Sum_probs=58.8
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCC---------CC-----chhhhhccCceEEEeec--C-------
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG---------ES-----DQEFAEFSSKILHLKGD--R------- 58 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---------~~-----~~~~~~~~~~~~~~~~d--~------- 58 (197)
|+|.+|.+++..|+..|. +++++++..-...+..+. .. ...+.+.++.+.+...+ +
T Consensus 41 GaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~~i~~~g~~~ 120 (340)
T 3rui_A 41 GAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKL 120 (340)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCCCCTTSCC
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEeccccccCccc
Confidence 679999999999999995 899998875442221111 00 12334556766665544 2
Q ss_pred -------CCHHHHHhhhhccCccEEEeccCCCccchHHHH-HhCC-CCCcEEE
Q 029198 59 -------KDYDFVKSSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIY 102 (197)
Q Consensus 59 -------~~~~~l~~~~~~~~~d~vi~~a~~~~~~~~~ll-~~~~-~~~~~v~ 102 (197)
.+.+.+.++++ ++|+|+++.--. .++.++ +++. ..+.+|.
T Consensus 121 ~~~~~~~~~~~~l~~~l~--~~DlVvd~tDn~--~tR~lin~~c~~~~~plI~ 169 (340)
T 3rui_A 121 VNEEAQHKDFDRLRALIK--EHDIIFLLVDSR--ESRWLPSLLSNIENKTVIN 169 (340)
T ss_dssp SCHHHHHHHHHHHHHHHH--HCSEEEECCSST--GGGHHHHHHHHHTTCEEEE
T ss_pred chhhhhcCCHHHHHhhhc--cCCEEEecCCCH--HHHHHHHHHHHHcCCcEEE
Confidence 13445667777 899999886432 344443 4444 4445554
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=95.01 E-value=0.011 Score=43.82 Aligned_cols=30 Identities=13% Similarity=0.169 Sum_probs=23.8
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEE-ecCCC
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGKA 30 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~-~r~~~ 30 (197)
+||+|.+|+.+++.+.+. +.+++++ +|+.+
T Consensus 13 ~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~ 44 (272)
T 4f3y_A 13 AGASGRMGRMLIEAVLAAPDATLVGALDRTGS 44 (272)
T ss_dssp SSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTC
T ss_pred ECCCCHHHHHHHHHHHhCCCCEEEEEEEecCc
Confidence 589999999999999876 5788775 66543
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=94.96 E-value=0.031 Score=43.13 Aligned_cols=87 Identities=22% Similarity=0.261 Sum_probs=56.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCC---CCccCCCCCCCchhhhhccCceEEEeecCCC--HHHHHhhhhccCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~l~~~~~~~~~d~ 75 (197)
+|| |.+|..++..+...|.+|+++++++ ++.. . ..+. +...+ | .+ .+.+.+ .. .++|+
T Consensus 187 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~--------~~~~--ga~~v--~-~~~~~~~~~~-~~-~~~d~ 249 (366)
T 2cdc_A 187 VGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT-V--------IEET--KTNYY--N-SSNGYDKLKD-SV-GKFDV 249 (366)
T ss_dssp ESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH-H--------HHHH--TCEEE--E-CTTCSHHHHH-HH-CCEEE
T ss_pred ECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH-H--------HHHh--CCcee--c-hHHHHHHHHH-hC-CCCCE
Confidence 488 9999999999999999999999987 3311 0 1111 23333 4 33 233444 22 47999
Q ss_pred EEeccCCCccch-HHHHHhCCCCCcEEEEec
Q 029198 76 VYDINGREADEV-EPILDALPNLEQFIYCSS 105 (197)
Q Consensus 76 vi~~a~~~~~~~-~~ll~~~~~~~~~v~~Ss 105 (197)
||++++.. ..+ +..++.++...+++.++.
T Consensus 250 vid~~g~~-~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 250 IIDATGAD-VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp EEECCCCC-THHHHHHGGGEEEEEEEEECSC
T ss_pred EEECCCCh-HHHHHHHHHHHhcCCEEEEEec
Confidence 99999853 234 566676663357777664
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=94.94 E-value=0.056 Score=46.23 Aligned_cols=89 Identities=15% Similarity=0.142 Sum_probs=57.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC---HHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~l~~~~~~~~~d~vi 77 (197)
.||+|.+|...+..+...|.+|+++++++ +.. .+. .... .++ |..+ .+.+.++....++|+||
T Consensus 352 ~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~-~l~---------lga~-~v~--~~~~~~~~~~i~~~t~g~GvDvVl 417 (795)
T 3slk_A 352 HSAAGGVGMAAIQLARHLGAEVYATASED-KWQ-AVE---------LSRE-HLA--SSRTCDFEQQFLGATGGRGVDVVL 417 (795)
T ss_dssp ESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGG-GSC---------SCGG-GEE--CSSSSTHHHHHHHHSCSSCCSEEE
T ss_pred ecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhh-hhh---------cChh-hee--ecCChhHHHHHHHHcCCCCeEEEE
Confidence 38899999999999999999999998765 311 111 0111 122 2333 23444444456899999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
++.+. ......++.++...+|+.++.
T Consensus 418 d~~gg--~~~~~~l~~l~~~Gr~v~iG~ 443 (795)
T 3slk_A 418 NSLAG--EFADASLRMLPRGGRFLELGK 443 (795)
T ss_dssp ECCCT--TTTHHHHTSCTTCEEEEECCS
T ss_pred ECCCc--HHHHHHHHHhcCCCEEEEecc
Confidence 98764 455677777775567887764
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=94.91 E-value=0.075 Score=37.58 Aligned_cols=28 Identities=21% Similarity=0.357 Sum_probs=25.7
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA 30 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~ 30 (197)
|+|.+|..++..|.+.|++|++++|+++
T Consensus 26 G~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 26 GKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4799999999999999999999999765
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=94.91 E-value=0.033 Score=42.64 Aligned_cols=83 Identities=14% Similarity=0.153 Sum_probs=54.8
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
|+ |.+|...+..+...|.+|+++++++++... ..+.... ..+ .+.+.+ .+ ++|+||++.+
T Consensus 184 Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~lGa~-~v~----~~~~~~----~~-~~D~vid~~g 243 (348)
T 3two_A 184 GF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQD---------ALSMGVK-HFY----TDPKQC----KE-ELDFIISTIP 243 (348)
T ss_dssp SC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHH---------HHHTTCS-EEE----SSGGGC----CS-CEEEEEECCC
T ss_pred CC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH---------HHhcCCC-eec----CCHHHH----hc-CCCEEEECCC
Confidence 65 999999999998899999999998776321 1111112 222 333322 21 8999999988
Q ss_pred CCccchHHHHHhCCCCCcEEEEec
Q 029198 82 READEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.. ......++.++...+++.++.
T Consensus 244 ~~-~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 244 TH-YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp SC-CCHHHHHTTEEEEEEEEECCC
T ss_pred cH-HHHHHHHHHHhcCCEEEEECC
Confidence 53 356677777774457777654
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=94.91 E-value=0.0074 Score=44.82 Aligned_cols=28 Identities=18% Similarity=0.099 Sum_probs=22.5
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecC
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRG 28 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~ 28 (197)
+|++|.+|+.+++.+.+. +++++++...
T Consensus 11 ~Ga~G~mG~~~~~~~~~~~~~elva~~d~ 39 (273)
T 1dih_A 11 AGAGGRMGRQLIQAALALEGVQLGAALER 39 (273)
T ss_dssp TTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred ECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 589999999999998754 7888855544
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=94.91 E-value=0.094 Score=40.28 Aligned_cols=94 Identities=13% Similarity=0.084 Sum_probs=59.6
Q ss_pred CCcccchHHHHHHHHHHCCCe-EEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHh----hhhccCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS----SLSAKGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~----~~~~~~~d~ 75 (197)
+|| |.+|...+..+...|.+ |+++++++++.. ...+....+..+..|-.+.+++.+ +....++|+
T Consensus 186 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~---------~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv 255 (363)
T 3m6i_A 186 CGA-GPIGLITMLCAKAAGACPLVITDIDEGRLK---------FAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAV 255 (363)
T ss_dssp ECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHH---------HHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH---------HHHHhchhcccccccccchHHHHHHHHHHhCCCCCCE
Confidence 366 99999999999889987 999988766521 111112233333344334443333 333458999
Q ss_pred EEeccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 76 VYDINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 76 vi~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
||++.|.. ......++.++...+++.++.
T Consensus 256 vid~~g~~-~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 256 ALECTGVE-SSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp EEECSCCH-HHHHHHHHHSCTTCEEEECCC
T ss_pred EEECCCCh-HHHHHHHHHhcCCCEEEEEcc
Confidence 99998742 345677888884468887653
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=94.90 E-value=0.075 Score=40.78 Aligned_cols=103 Identities=16% Similarity=0.110 Sum_probs=62.2
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccC---C-CCC-----CC-----chhhhhccCceEEEe--ecCCCHHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQ---Q-LPG-----ES-----DQEFAEFSSKILHLK--GDRKDYDFVK 65 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~-~~~-----~~-----~~~~~~~~~~~~~~~--~d~~~~~~l~ 65 (197)
|+|.+|.+++..|+..|. ++++++...-...+ + +.. .. ..++.+.++.+.+.. .++.+ ...
T Consensus 43 G~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~~~~~--~~~ 120 (346)
T 1y8q_A 43 GLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTEDIEK--KPE 120 (346)
T ss_dssp CCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECSCGGG--CCH
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEecccCc--chH
Confidence 568999999999999995 89898876432211 1 110 00 123445566654443 34432 234
Q ss_pred hhhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecceecc
Q 029198 66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
++++ ++|+||.+.. +......+-++++ ....+|..++.+.+|
T Consensus 121 ~~~~--~~dvVv~~~d-~~~~r~~ln~~~~~~~ip~i~~~~~G~~G 163 (346)
T 1y8q_A 121 SFFT--QFDAVCLTCC-SRDVIVKVDQICHKNSIKFFTGDVFGYHG 163 (346)
T ss_dssp HHHT--TCSEEEEESC-CHHHHHHHHHHHHHTTCEEEEEEEEBTEE
T ss_pred HHhc--CCCEEEEcCC-CHHHHHHHHHHHHHcCCCEEEEeecccEE
Confidence 5566 8999998753 3333344556666 556788777766665
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=94.86 E-value=0.16 Score=39.57 Aligned_cols=90 Identities=16% Similarity=0.093 Sum_probs=55.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCC----------------------C
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK----------------------D 60 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----------------------~ 60 (197)
|+|.+|...+..+...|.+|+++++++..... ..+. +..++..|.. .
T Consensus 179 GaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~---------~~~~--Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~ 247 (384)
T 1l7d_A 179 GVGVAGLQAIATAKRLGAVVMATDVRAATKEQ---------VESL--GGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ 247 (384)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCSTTHHH---------HHHT--TCEECCC-----------------------CCH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHc--CCeEEeecccccccccccccchhhcCHHHHhhh
Confidence 36999999999999999999999998765321 0111 1122111110 1
Q ss_pred HHHHHhhhhccCccEEEecc---CCCccc--hHHHHHhCCCCCcEEEEec
Q 029198 61 YDFVKSSLSAKGFDVVYDIN---GREADE--VEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 61 ~~~l~~~~~~~~~d~vi~~a---~~~~~~--~~~ll~~~~~~~~~v~~Ss 105 (197)
.+.+.+.+. +.|+||+++ +..... ++..++.++.-..++.++.
T Consensus 248 ~~~l~~~~~--~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~ 295 (384)
T 1l7d_A 248 AEAVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV 295 (384)
T ss_dssp HHHHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred HHHHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence 233666666 899999988 432222 3667788874456777763
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=94.85 E-value=0.0039 Score=41.45 Aligned_cols=64 Identities=17% Similarity=0.177 Sum_probs=41.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|+|.+|..++..|.+.|++|++.+|++++... +.+.. +.... ...+ +.+++. ++|+||.+.+.
T Consensus 28 G~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~---------~a~~~-~~~~~--~~~~---~~~~~~--~~Divi~at~~ 90 (144)
T 3oj0_A 28 GNGMLASEIAPYFSYPQYKVTVAGRNIDHVRA---------FAEKY-EYEYV--LIND---IDSLIK--NNDVIITATSS 90 (144)
T ss_dssp CCSHHHHHHGGGCCTTTCEEEEEESCHHHHHH---------HHHHH-TCEEE--ECSC---HHHHHH--TCSEEEECSCC
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHH---------HHHHh-CCceE--eecC---HHHHhc--CCCEEEEeCCC
Confidence 35999999999999999999999998665321 11101 12211 2233 344556 89999998765
Q ss_pred C
Q 029198 83 E 83 (197)
Q Consensus 83 ~ 83 (197)
.
T Consensus 91 ~ 91 (144)
T 3oj0_A 91 K 91 (144)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=94.84 E-value=0.12 Score=39.99 Aligned_cols=90 Identities=10% Similarity=0.141 Sum_probs=58.6
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCC----C-HHHHHhhhhccCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK----D-YDFVKSSLSAKGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----~-~~~l~~~~~~~~~d 74 (197)
+|+ |.+|...+..+...|. +|+++++++++... . .+. .--..+ |.. + .+.+.++... ++|
T Consensus 200 ~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~-a--------~~l-Ga~~vi--~~~~~~~~~~~~i~~~~~g-g~D 265 (378)
T 3uko_A 200 FGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYET-A--------KKF-GVNEFV--NPKDHDKPIQEVIVDLTDG-GVD 265 (378)
T ss_dssp ECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHH-H--------HTT-TCCEEE--CGGGCSSCHHHHHHHHTTS-CBS
T ss_pred ECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH-H--------HHc-CCcEEE--ccccCchhHHHHHHHhcCC-CCC
Confidence 366 8999999999988898 89999988776321 1 111 111222 332 2 3345555444 899
Q ss_pred EEEeccCCCccchHHHHHhCCC-CCcEEEEec
Q 029198 75 VVYDINGREADEVEPILDALPN-LEQFIYCSS 105 (197)
Q Consensus 75 ~vi~~a~~~~~~~~~ll~~~~~-~~~~v~~Ss 105 (197)
+||++++. .......++.++. ..+++.++.
T Consensus 266 ~vid~~g~-~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 266 YSFECIGN-VSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp EEEECSCC-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred EEEECCCC-HHHHHHHHHHhhccCCEEEEEcc
Confidence 99999884 2345677777874 478887764
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=94.83 E-value=0.11 Score=39.81 Aligned_cols=97 Identities=14% Similarity=0.187 Sum_probs=56.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeec-C--CC-HHHHHhhh--hccCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD-R--KD-YDFVKSSL--SAKGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~--~~-~~~l~~~~--~~~~~d 74 (197)
+||+|.+|...+..+...|.+|++++++.++..... ..+.+.... ..+..+ . .+ .+.+.++. ...++|
T Consensus 174 ~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-----~~~~~lGa~-~vi~~~~~~~~~~~~~i~~~t~~~~~g~D 247 (364)
T 1gu7_A 174 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVV-----ASLKELGAT-QVITEDQNNSREFGPTIKEWIKQSGGEAK 247 (364)
T ss_dssp SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHH-----HHHHHHTCS-EEEEHHHHHCGGGHHHHHHHHHHHTCCEE
T ss_pred CCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHH-----HHHHhcCCe-EEEecCccchHHHHHHHHHHhhccCCCce
Confidence 588999999999988888999999988665410000 001111111 122111 0 11 22344443 234799
Q ss_pred EEEeccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 75 VVYDINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 75 ~vi~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+||++.+.. .....++.++...+++.++.
T Consensus 248 vvid~~G~~--~~~~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 248 LALNCVGGK--SSTGIARKLNNNGLMLTYGG 276 (364)
T ss_dssp EEEESSCHH--HHHHHHHTSCTTCEEEECCC
T ss_pred EEEECCCch--hHHHHHHHhccCCEEEEecC
Confidence 999998752 33356677774457877664
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.013 Score=44.76 Aligned_cols=91 Identities=15% Similarity=0.140 Sum_probs=56.9
Q ss_pred CCcccchHHHHHHHHHHC--CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi 77 (197)
+|| |.+|...+..+... |.+|+++++++++... ..+... -.. .|..+ .+.+.++....++|+||
T Consensus 177 ~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~---------~~~lGa-~~v--i~~~~~~~~~~~~~~g~g~D~vi 243 (344)
T 2h6e_A 177 NGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDF---------ALELGA-DYV--SEMKDAESLINKLTDGLGASIAI 243 (344)
T ss_dssp ECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHH---------HHHHTC-SEE--ECHHHHHHHHHHHHTTCCEEEEE
T ss_pred ECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHH---------HHHhCC-CEE--eccccchHHHHHhhcCCCccEEE
Confidence 477 99999999999888 9999999987655211 111111 112 23333 33344443334799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
++++.. ......++.++...+++.++.
T Consensus 244 d~~g~~-~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 244 DLVGTE-ETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp ESSCCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred ECCCCh-HHHHHHHHHhhcCCEEEEeCC
Confidence 999752 245667777773347776654
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=94.80 E-value=0.074 Score=43.51 Aligned_cols=64 Identities=14% Similarity=0.156 Sum_probs=52.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|.++++.|.+.|++|++++++++..... ...+.+|.+|++.++++-- .++|.++-+.+.
T Consensus 355 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~---------------~~~i~gD~t~~~~L~~agi-~~ad~vi~~~~~ 418 (565)
T 4gx0_A 355 GHGRIGCAAAAFLDRKPVPFILIDRQESPVCND---------------HVVVYGDATVGQTLRQAGI-DRASGIIVTTND 418 (565)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCS---------------SCEEESCSSSSTHHHHHTT-TSCSEEEECCSC
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECChHHHhhc---------------CCEEEeCCCCHHHHHhcCc-cccCEEEEECCC
Confidence 459999999999999999999999998774311 1789999999999887743 289999877654
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=94.79 E-value=0.13 Score=39.65 Aligned_cols=100 Identities=13% Similarity=0.117 Sum_probs=61.2
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCC--------------CchhhhhccCc--eEEEeecCCCHHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSK--ILHLKGDRKDYDFVK 65 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~--~~~~~~d~~~~~~l~ 65 (197)
|+|.+|++++..|+..|. +++++++..-+..+..+.. ....+.+.++. ++.+..++.+..++.
T Consensus 125 G~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~~~ 204 (353)
T 3h5n_A 125 GCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLH 204 (353)
T ss_dssp CCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGGGG
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeecccCchhhhh
Confidence 568899999999999995 8999998754322211110 01233444555 445555666655455
Q ss_pred hhhhccCccEEEeccCCCccchHHHH-HhCC-CCCcEEEEecc
Q 029198 66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSA 106 (197)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll-~~~~-~~~~~v~~Ss~ 106 (197)
. ++ ++|+||.+.. +...++.++ +++. ..+.+|+.+..
T Consensus 205 ~-~~--~~DlVvd~~D-n~~~~r~~ln~~c~~~~~p~i~~~~~ 243 (353)
T 3h5n_A 205 K-VP--EADIWVVSAD-HPFNLINWVNKYCVRANQPYINAGYV 243 (353)
T ss_dssp G-SC--CCSEEEECCC-CSTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred H-hc--cCCEEEEecC-ChHHHHHHHHHHHHHhCCCEEEEEEe
Confidence 5 66 8999998763 333255444 5565 44567766543
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=94.78 E-value=0.06 Score=41.36 Aligned_cols=88 Identities=17% Similarity=0.181 Sum_probs=49.6
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCC--CHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--DYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~l~~~~~~~~~d~vi 77 (197)
+||||++|..|++.|.+.. .++..+.-..... .++.+..+.+. ....+. +.+. +++ ++|+||
T Consensus 19 vGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG---------~~~~~~~p~~~-~~l~~~~~~~~~---~~~--~~Dvvf 83 (351)
T 1vkn_A 19 IGATGYTGLELVRLLKNHPEAKITYLSSRTYAG---------KKLEEIFPSTL-ENSILSEFDPEK---VSK--NCDVLF 83 (351)
T ss_dssp ESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTT---------SBHHHHCGGGC-CCCBCBCCCHHH---HHH--HCSEEE
T ss_pred ECCCCHHHHHHHHHHHcCCCcEEEEEeCccccc---------CChHHhChhhc-cCceEEeCCHHH---hhc--CCCEEE
Confidence 4999999999999999886 4777776433221 11111111111 111111 2332 234 799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEecc
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
.+++. ...+.+...+ .-.++|=.|+.
T Consensus 84 ~alp~--~~s~~~~~~~-~g~~VIDlSsd 109 (351)
T 1vkn_A 84 TALPA--GASYDLVREL-KGVKIIDLGAD 109 (351)
T ss_dssp ECCST--THHHHHHTTC-CSCEEEESSST
T ss_pred ECCCc--HHHHHHHHHh-CCCEEEECChh
Confidence 88754 2344555555 33467777763
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=94.77 E-value=0.15 Score=39.37 Aligned_cols=90 Identities=8% Similarity=0.028 Sum_probs=55.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHH---HHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~l~~~~~~~~~d~vi 77 (197)
+||+|.+|...+..+...|.+|+++. ++++.. . ..+. .--..+ |..+.+ .+.++... ++|+||
T Consensus 171 ~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~--------~~~l-Ga~~vi--~~~~~~~~~~v~~~t~g-~~d~v~ 236 (371)
T 3gqv_A 171 YGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-L--------AKSR-GAEEVF--DYRAPNLAQTIRTYTKN-NLRYAL 236 (371)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-H--------HHHT-TCSEEE--ETTSTTHHHHHHHHTTT-CCCEEE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-H--------HHHc-CCcEEE--ECCCchHHHHHHHHccC-CccEEE
Confidence 48889999999999999999999886 333311 1 1111 111222 444433 34444332 599999
Q ss_pred eccCCCccchHHHHHhC-CCCCcEEEEec
Q 029198 78 DINGREADEVEPILDAL-PNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~-~~~~~~v~~Ss 105 (197)
.+.|.. ......++.+ +...+++.++.
T Consensus 237 d~~g~~-~~~~~~~~~l~~~~G~iv~~g~ 264 (371)
T 3gqv_A 237 DCITNV-ESTTFCFAAIGRAGGHYVSLNP 264 (371)
T ss_dssp ESSCSH-HHHHHHHHHSCTTCEEEEESSC
T ss_pred ECCCch-HHHHHHHHHhhcCCCEEEEEec
Confidence 998852 3456677777 44467887764
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=94.72 E-value=0.081 Score=42.44 Aligned_cols=28 Identities=21% Similarity=0.388 Sum_probs=26.8
Q ss_pred cccchHHHHHHHHHHC-CC-eEEEEecCCC
Q 029198 3 GTRFIGVFLSRLLVKE-GH-QVTLFTRGKA 30 (197)
Q Consensus 3 atG~vG~~l~~~L~~~-g~-~V~~~~r~~~ 30 (197)
|+|++|..++..|++. |+ +|++++++++
T Consensus 25 GlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 25 GMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 6799999999999999 99 9999999988
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=94.71 E-value=0.069 Score=41.20 Aligned_cols=30 Identities=17% Similarity=0.335 Sum_probs=23.2
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKA 30 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~ 30 (197)
+||||++|..|++.|.+.. .++..+.....
T Consensus 13 vGATGyvG~eLlrlL~~hP~~el~~l~S~~s 43 (359)
T 4dpl_A 13 LGATGLVGIEYVRMLSNHPYIKPAYLAGKGS 43 (359)
T ss_dssp TTTTSTTHHHHHHHHTTCSSEEEEEEEESTT
T ss_pred ECCCCHHHHHHHHHHHhCCCceEEEEECchh
Confidence 5999999999999887764 47777765433
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=94.71 E-value=0.069 Score=41.20 Aligned_cols=30 Identities=17% Similarity=0.335 Sum_probs=23.2
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKA 30 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~ 30 (197)
+||||++|..|++.|.+.. .++..+.....
T Consensus 13 vGATGyvG~eLlrlL~~hP~~el~~l~S~~s 43 (359)
T 4dpk_A 13 LGATGLVGIEYVRMLSNHPYIKPAYLAGKGS 43 (359)
T ss_dssp TTTTSTTHHHHHHHHTTCSSEEEEEEEESTT
T ss_pred ECCCCHHHHHHHHHHHhCCCceEEEEECchh
Confidence 5999999999999887764 47777765433
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=94.69 E-value=0.0034 Score=48.21 Aligned_cols=69 Identities=12% Similarity=0.146 Sum_probs=42.5
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhc-c--CceEEEeecCCCHHHHHhhhhccCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEF-S--SKILHLKGDRKDYDFVKSSLSAKGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~d~~~~~~l~~~~~~~~~d~ 75 (197)
+|++|++|+.++..|+..| .+|++++..+++..... .++... . .++.+ ..+..++++ ++|+
T Consensus 14 iGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a-----~DL~~~~~~~~~i~~-------t~d~~~al~--dADv 79 (343)
T 3fi9_A 14 VGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVA-----EEIRHCGFEGLNLTF-------TSDIKEALT--DAKY 79 (343)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHH-----HHHHHHCCTTCCCEE-------ESCHHHHHT--TEEE
T ss_pred ECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHH-----HhhhhCcCCCCceEE-------cCCHHHHhC--CCCE
Confidence 4888999999999999998 59999998654321000 001110 0 11211 123445566 9999
Q ss_pred EEeccCCC
Q 029198 76 VYDINGRE 83 (197)
Q Consensus 76 vi~~a~~~ 83 (197)
||.++|..
T Consensus 80 VvitaG~p 87 (343)
T 3fi9_A 80 IVSSGGAP 87 (343)
T ss_dssp EEECCC--
T ss_pred EEEccCCC
Confidence 99999864
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=94.65 E-value=0.064 Score=40.10 Aligned_cols=30 Identities=13% Similarity=0.157 Sum_probs=27.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|+|.+|..++..|++.|++|++.+|++++.
T Consensus 22 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~ 51 (296)
T 3qha_A 22 GLGNMGAPMATRMTEWPGGVTVYDIRIEAM 51 (296)
T ss_dssp CCSTTHHHHHHHHTTSTTCEEEECSSTTTS
T ss_pred CcCHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 579999999999999999999999998764
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=94.65 E-value=0.013 Score=43.73 Aligned_cols=71 Identities=11% Similarity=0.115 Sum_probs=44.9
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
+|+ |.+|++++..|++.|. +|++++|+.++..... .++....+.+.+...++.+ +.+.+. .+|+||++
T Consensus 133 lGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la-----~~~~~~~~~~~i~~~~~~~---l~~~l~--~~DiVIna 201 (283)
T 3jyo_A 133 VGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALA-----DVINNAVGREAVVGVDARG---IEDVIA--AADGVVNA 201 (283)
T ss_dssp ECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHH-----HHHHHHHTSCCEEEECSTT---HHHHHH--HSSEEEEC
T ss_pred ECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH-----HHHHhhcCCceEEEcCHHH---HHHHHh--cCCEEEEC
Confidence 355 8999999999999997 7999999866532110 0111111223344444433 445566 78999998
Q ss_pred cCC
Q 029198 80 NGR 82 (197)
Q Consensus 80 a~~ 82 (197)
...
T Consensus 202 Tp~ 204 (283)
T 3jyo_A 202 TPM 204 (283)
T ss_dssp SST
T ss_pred CCC
Confidence 754
|
| >3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* | Back alignment and structure |
|---|
Probab=94.65 E-value=0.066 Score=40.86 Aligned_cols=81 Identities=17% Similarity=0.150 Sum_probs=51.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|.+.|++|++.+|+++... ++.. ..+ +.++++ .+|+|+-+.-.
T Consensus 171 G~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~----------------g~~~----~~~---l~ell~--~aDvVil~vP~ 225 (333)
T 3ba1_A 171 GLGRIGLAVAERAEAFDCPISYFSRSKKPNT----------------NYTY----YGS---VVELAS--NSDILVVACPL 225 (333)
T ss_dssp CCSHHHHHHHHHHHTTTCCEEEECSSCCTTC----------------CSEE----ESC---HHHHHH--TCSEEEECSCC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCchhcc----------------Ccee----cCC---HHHHHh--cCCEEEEecCC
Confidence 5799999999999999999999999865421 1111 122 345566 78888866543
Q ss_pred Cc--cch--HHHHHhCCCCCcEEEEeccee
Q 029198 83 EA--DEV--EPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~--~~~--~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+. ... +..+..++.-.-+|.+|+..+
T Consensus 226 ~~~t~~li~~~~l~~mk~gailIn~srG~~ 255 (333)
T 3ba1_A 226 TPETTHIINREVIDALGPKGVLINIGRGPH 255 (333)
T ss_dssp CGGGTTCBCHHHHHHHCTTCEEEECSCGGG
T ss_pred ChHHHHHhhHHHHhcCCCCCEEEECCCCch
Confidence 21 111 345566663356777776554
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=94.54 E-value=0.037 Score=42.29 Aligned_cols=92 Identities=13% Similarity=0.138 Sum_probs=57.3
Q ss_pred CcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 2 GGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|+ |.+|...+..+... |.+|+++++++++... ..+.... ..+..+-...+.+.++....++|+||++.
T Consensus 179 Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~---------~~~lGa~-~~i~~~~~~~~~v~~~t~g~g~d~v~d~~ 247 (345)
T 3jv7_A 179 GV-GGLGHVGIQILRAVSAARVIAVDLDDDRLAL---------AREVGAD-AAVKSGAGAADAIRELTGGQGATAVFDFV 247 (345)
T ss_dssp CC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHH---------HHHTTCS-EEEECSTTHHHHHHHHHGGGCEEEEEESS
T ss_pred CC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH---------HHHcCCC-EEEcCCCcHHHHHHHHhCCCCCeEEEECC
Confidence 65 89999988888777 6899999998765321 1111111 22222212234555555556899999998
Q ss_pred CCCccchHHHHHhCCCCCcEEEEec
Q 029198 81 GREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+.. ......++.++...+++.++.
T Consensus 248 G~~-~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 248 GAQ-STIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp CCH-HHHHHHHHHEEEEEEEEECSC
T ss_pred CCH-HHHHHHHHHHhcCCEEEEECC
Confidence 852 345667777773357776654
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=94.50 E-value=0.065 Score=41.95 Aligned_cols=90 Identities=13% Similarity=0.055 Sum_probs=58.7
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEee----------------cCCC------
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG----------------DRKD------ 60 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------d~~~------ 60 (197)
|.|-+|...++.+...|.+|+++++++...... .+. +..++.. .+++
T Consensus 197 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~---------~~~--G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~ 265 (405)
T 4dio_A 197 GAGVAGLQAIATARRLGAVVSATDVRPAAKEQV---------ASL--GAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ 265 (405)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHH---------HHT--TCEECCCCC-----------------CHHHHHH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH---------HHc--CCceeecccccccccccccchhhhcchhhhhhh
Confidence 459999999999999999999999987653210 110 1222221 1222
Q ss_pred HHHHHhhhhccCccEEEeccCCCc-----cchHHHHHhCCCCCcEEEEec
Q 029198 61 YDFVKSSLSAKGFDVVYDINGREA-----DEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 61 ~~~l~~~~~~~~~d~vi~~a~~~~-----~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.+.+.++++ +.|+||.++.... --++.+++.|+.-.-+|-+|.
T Consensus 266 ~~~l~e~l~--~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 266 AALVAEHIA--KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHHHHH--TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred HhHHHHHhc--CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence 246777787 9999999864321 125788888884456777764
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=94.50 E-value=0.05 Score=41.18 Aligned_cols=30 Identities=27% Similarity=0.441 Sum_probs=27.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|+|.+|..++..|++.|++|++.+|++++.
T Consensus 38 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~ 67 (320)
T 4dll_A 38 GTGSMGLPMARRLCEAGYALQVWNRTPARA 67 (320)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CccHHHHHHHHHHHhCCCeEEEEcCCHHHH
Confidence 579999999999999999999999987653
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=94.47 E-value=0.075 Score=40.78 Aligned_cols=89 Identities=16% Similarity=0.157 Sum_probs=55.1
Q ss_pred CcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCC--C-HHH---HHhhhhccCcc
Q 029198 2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--D-YDF---VKSSLSAKGFD 74 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~-~~~---l~~~~~~~~~d 74 (197)
|+ |.+|...+..+...|. +|+++++++++... ..+.... .. .|.. + .+. +.+... .++|
T Consensus 179 Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~---------a~~lGa~-~v--i~~~~~~~~~~~~~i~~~~~-~g~D 244 (356)
T 1pl8_A 179 GA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK---------AKEIGAD-LV--LQISKESPQEIARKVEGQLG-CKPE 244 (356)
T ss_dssp CC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH---------HHHTTCS-EE--EECSSCCHHHHHHHHHHHHT-SCCS
T ss_pred CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH---------HHHhCCC-EE--EcCcccccchHHHHHHHHhC-CCCC
Confidence 64 8999999998888898 99999987654210 1111111 22 2333 2 332 222222 4799
Q ss_pred EEEeccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 75 VVYDINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 75 ~vi~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+||++.+.. ......++.++...+++.++.
T Consensus 245 ~vid~~g~~-~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 245 VTIECTGAE-ASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp EEEECSCCH-HHHHHHHHHSCTTCEEEECSC
T ss_pred EEEECCCCh-HHHHHHHHHhcCCCEEEEEec
Confidence 999998742 345677888884457877653
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=94.43 E-value=0.045 Score=40.68 Aligned_cols=30 Identities=30% Similarity=0.520 Sum_probs=27.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|+|.+|..++..|++.|++|++.+|++++.
T Consensus 8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~ 37 (287)
T 3pef_A 8 GLGIMGSAMAKNLVKAGCSVTIWNRSPEKA 37 (287)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSGGGG
T ss_pred eecHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence 579999999999999999999999987764
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=94.42 E-value=0.14 Score=39.50 Aligned_cols=90 Identities=11% Similarity=0.109 Sum_probs=56.8
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-----HHHHHhhhhccCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-----YDFVKSSLSAKGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~l~~~~~~~~~d 74 (197)
+| +|.+|...+..+...|. +|+++++++++... ..+... -.. .|..+ .+.+.++... ++|
T Consensus 202 ~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~---------a~~lGa-~~v--i~~~~~~~~~~~~v~~~~~~-g~D 267 (376)
T 1e3i_A 202 FG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPK---------AKALGA-TDC--LNPRELDKPVQDVITELTAG-GVD 267 (376)
T ss_dssp EC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH---------HHHTTC-SEE--ECGGGCSSCHHHHHHHHHTS-CBS
T ss_pred EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH---------HHHhCC-cEE--EccccccchHHHHHHHHhCC-Ccc
Confidence 36 49999999998888898 89999987665321 111111 122 23332 2334444333 899
Q ss_pred EEEeccCCCccchHHHHHhCCCC-CcEEEEec
Q 029198 75 VVYDINGREADEVEPILDALPNL-EQFIYCSS 105 (197)
Q Consensus 75 ~vi~~a~~~~~~~~~ll~~~~~~-~~~v~~Ss 105 (197)
+||++.+. .......++.++.. .+++.++.
T Consensus 268 vvid~~G~-~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 268 YSLDCAGT-AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp EEEESSCC-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred EEEECCCC-HHHHHHHHHHhhcCCCEEEEECC
Confidence 99999874 23456777888844 68887764
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=94.38 E-value=0.092 Score=40.76 Aligned_cols=28 Identities=14% Similarity=0.308 Sum_probs=20.8
Q ss_pred CCcccchHHHHHH-HHHHCC---CeEEEEecC
Q 029198 1 MGGTRFIGVFLSR-LLVKEG---HQVTLFTRG 28 (197)
Q Consensus 1 tGatG~vG~~l~~-~L~~~g---~~V~~~~r~ 28 (197)
+||||++|+.|++ .|.++. .++..++-+
T Consensus 10 vGATG~vG~ellr~lL~~hp~~~~~l~~~ss~ 41 (377)
T 3uw3_A 10 VGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS 41 (377)
T ss_dssp ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred ECCCCHHHHHHHHHHHhhCCCCceEEEEEech
Confidence 4999999999999 665555 366666543
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=94.36 E-value=0.4 Score=34.82 Aligned_cols=100 Identities=12% Similarity=0.137 Sum_probs=57.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEE-EecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhh-hccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL-SAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~-~~~~~d~vi~ 78 (197)
+|+ |.+|+.+++.+.+.++++++ ++|+.... ....- ...+.+.. +.. +..|++.++.+...+ .+.+.++|+.
T Consensus 9 iGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~-~gv~v--~~dl~~l~-~~D-VvIDft~p~a~~~~~~l~~g~~vVig 82 (243)
T 3qy9_A 9 IGY-GAMNQRVARLAEEKGHEIVGVIENTPKAT-TPYQQ--YQHIADVK-GAD-VAIDFSNPNLLFPLLDEDFHLPLVVA 82 (243)
T ss_dssp ECC-SHHHHHHHHHHHHTTCEEEEEECSSCC---CCSCB--CSCTTTCT-TCS-EEEECSCHHHHHHHHTSCCCCCEEEC
T ss_pred ECc-CHHHHHHHHHHHhCCCEEEEEEecCcccc-CCCce--eCCHHHHh-CCC-EEEEeCChHHHHHHHHHhcCCceEeC
Confidence 377 99999999999998778776 45554321 00000 00111111 222 235778887665554 3347889988
Q ss_pred ccCCCccchHHHHHhCCCCCcEEEEecce
Q 029198 79 INGREADEVEPILDALPNLEQFIYCSSAG 107 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~v~~Ss~~ 107 (197)
..|.+....+.+-++++. ..+++.+.++
T Consensus 83 TTG~s~e~~~~l~~aa~~-~~v~~a~N~S 110 (243)
T 3qy9_A 83 TTGEKEKLLNKLDELSQN-MPVFFSANMS 110 (243)
T ss_dssp CCSSHHHHHHHHHHHTTT-SEEEECSSCC
T ss_pred CCCCCHHHHHHHHHHHhc-CCEEEECCcc
Confidence 877654445556666654 3455555443
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=94.36 E-value=0.018 Score=44.20 Aligned_cols=28 Identities=25% Similarity=0.452 Sum_probs=22.1
Q ss_pred CCcccchHHHHHHHHHHCCC---eEEEEecC
Q 029198 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRG 28 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~---~V~~~~r~ 28 (197)
+||||++|..|++.|.++.+ ++..++-.
T Consensus 7 vGatG~vG~el~~lL~~h~fp~~el~~~~s~ 37 (344)
T 3tz6_A 7 VGATGQVGQVMRTLLDERDFPASAVRFFASA 37 (344)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCEEEEEEEECT
T ss_pred ECCCChHHHHHHHHHHhCCCCceEEEEEECc
Confidence 49999999999999988743 56666543
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=94.31 E-value=0.02 Score=42.83 Aligned_cols=84 Identities=19% Similarity=0.201 Sum_probs=54.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|.+|++.+|++++... ..+ .++..+ + .+++.+++. .+|+|+.+...
T Consensus 162 G~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~---------~~~--~g~~~~--~---~~~l~~~l~--~aDvVi~~~p~ 223 (293)
T 3d4o_A 162 GLGRVGMSVARKFAALGAKVKVGARESDLLAR---------IAE--MGMEPF--H---ISKAAQELR--DVDVCINTIPA 223 (293)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHH--TTSEEE--E---GGGHHHHTT--TCSEEEECCSS
T ss_pred eeCHHHHHHHHHHHhCCCEEEEEECCHHHHHH---------HHH--CCCeec--C---hhhHHHHhc--CCCEEEECCCh
Confidence 46999999999999999999999998644110 011 122322 1 234566676 89999988754
Q ss_pred CccchHHHHHhCCCCCcEEEEec
Q 029198 83 EADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
..- .+..++.++....+|.++.
T Consensus 224 ~~i-~~~~l~~mk~~~~lin~ar 245 (293)
T 3d4o_A 224 LVV-TANVLAEMPSHTFVIDLAS 245 (293)
T ss_dssp CCB-CHHHHHHSCTTCEEEECSS
T ss_pred HHh-CHHHHHhcCCCCEEEEecC
Confidence 322 2356677774456776663
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=94.30 E-value=0.21 Score=38.75 Aligned_cols=61 Identities=15% Similarity=0.156 Sum_probs=46.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|+|.+|..+++.+.+.|++|++++..+......+ .-..+..++.|.+.+.++.+ .+|+|..
T Consensus 21 G~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~-------------ad~~~~~~~~d~~~l~~~~~--~~dvI~~ 81 (389)
T 3q2o_A 21 GGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQV-------------ADIEIVASYDDLKAIQHLAE--ISDVVTY 81 (389)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTT-------------CSEEEECCTTCHHHHHHHHH--TCSEEEE
T ss_pred CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHh-------------CCceEecCcCCHHHHHHHHH--hCCEeee
Confidence 4688999999999999999999988754422111 11345578899999999988 7888853
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=94.30 E-value=0.027 Score=41.90 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=26.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|.+|..++..|++.|++|++.+|+++.
T Consensus 11 GaG~mG~~iA~~la~~G~~V~l~d~~~~~ 39 (283)
T 4e12_A 11 GTGVLGSQIAFQTAFHGFAVTAYDINTDA 39 (283)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence 56999999999999999999999998765
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=94.30 E-value=0.033 Score=43.27 Aligned_cols=69 Identities=13% Similarity=0.241 Sum_probs=45.2
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEEe
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi~ 78 (197)
||+|.+|...+..+...|.+|+++++++++... ..+.... ..+ |..+. +.+.++....++|+||+
T Consensus 179 ag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~---------~~~lGa~-~~~--~~~~~~~~~~v~~~t~~~g~d~v~d 246 (379)
T 3iup_A 179 AAASNLGQMLNQICLKDGIKLVNIVRKQEQADL---------LKAQGAV-HVC--NAASPTFMQDLTEALVSTGATIAFD 246 (379)
T ss_dssp STTSHHHHHHHHHHHHHTCCEEEEESSHHHHHH---------HHHTTCS-CEE--ETTSTTHHHHHHHHHHHHCCCEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHhCCCc-EEE--eCCChHHHHHHHHHhcCCCceEEEE
Confidence 389999999999998899999999987655221 1111111 222 33332 34455544458999999
Q ss_pred ccCC
Q 029198 79 INGR 82 (197)
Q Consensus 79 ~a~~ 82 (197)
+.|.
T Consensus 247 ~~g~ 250 (379)
T 3iup_A 247 ATGG 250 (379)
T ss_dssp SCEE
T ss_pred CCCc
Confidence 9875
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=94.26 E-value=0.1 Score=39.76 Aligned_cols=85 Identities=19% Similarity=0.160 Sum_probs=52.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|.+.|++|++.+|+++..... .+ .++.. .+ +.+++. .+|+|+-+...
T Consensus 162 G~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~---------~~--~g~~~-----~~---l~e~l~--~aDvVi~~vp~ 220 (330)
T 2gcg_A 162 GLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEA---------AE--FQAEF-----VS---TPELAA--QSDFIVVACSL 220 (330)
T ss_dssp CCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHH---------HT--TTCEE-----CC---HHHHHH--HCSEEEECCCC
T ss_pred CcCHHHHHHHHHHHHCCCEEEEECCCCcchhHH---------Hh--cCcee-----CC---HHHHHh--hCCEEEEeCCC
Confidence 469999999999999999999999976542110 00 12221 12 344555 78988876544
Q ss_pred Cc--cch--HHHHHhCCCCCcEEEEeccee
Q 029198 83 EA--DEV--EPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~--~~~--~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+. ... +.++..++...-+|.+|+..+
T Consensus 221 ~~~t~~~i~~~~~~~mk~gailIn~srg~~ 250 (330)
T 2gcg_A 221 TPATEGLCNKDFFQKMKETAVFINISRGDV 250 (330)
T ss_dssp CTTTTTCBSHHHHHHSCTTCEEEECSCGGG
T ss_pred ChHHHHhhCHHHHhcCCCCcEEEECCCCcc
Confidence 31 111 346667774456777776543
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=94.25 E-value=0.085 Score=40.85 Aligned_cols=28 Identities=14% Similarity=0.362 Sum_probs=20.9
Q ss_pred CCcccchHHHHHH-HHHHCC---CeEEEEecC
Q 029198 1 MGGTRFIGVFLSR-LLVKEG---HQVTLFTRG 28 (197)
Q Consensus 1 tGatG~vG~~l~~-~L~~~g---~~V~~~~r~ 28 (197)
+||||++|+.|++ .|.++. .++..++-+
T Consensus 6 vGATG~vG~ellr~lL~~hp~~~~~l~~~ss~ 37 (370)
T 3pzr_A 6 VGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS 37 (370)
T ss_dssp ESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred ECCCCHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 4999999999999 666555 366666543
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=94.25 E-value=0.028 Score=43.26 Aligned_cols=86 Identities=14% Similarity=0.081 Sum_probs=51.7
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|.+|++.+|++..... ..+ .++..+ +++.++++ .+|+|+.+.-.
T Consensus 171 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~---------~~~--~g~~~~-------~~l~ell~--~aDvV~l~~Pl 230 (351)
T 3jtm_A 171 GAGRIGKLLLQRLKPFGCNLLYHDRLQMAPEL---------EKE--TGAKFV-------EDLNEMLP--KCDVIVINMPL 230 (351)
T ss_dssp CCSHHHHHHHHHHGGGCCEEEEECSSCCCHHH---------HHH--HCCEEC-------SCHHHHGG--GCSEEEECSCC
T ss_pred EeCHHHHHHHHHHHHCCCEEEEeCCCccCHHH---------HHh--CCCeEc-------CCHHHHHh--cCCEEEECCCC
Confidence 57999999999999999999999997644210 000 011111 23455666 77887765543
Q ss_pred Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+.. + ....+..|+.-.-+|++|...+
T Consensus 231 t~~t~~li~~~~l~~mk~gailIN~aRG~~ 260 (351)
T 3jtm_A 231 TEKTRGMFNKELIGKLKKGVLIVNNARGAI 260 (351)
T ss_dssp CTTTTTCBSHHHHHHSCTTEEEEECSCGGG
T ss_pred CHHHHHhhcHHHHhcCCCCCEEEECcCchh
Confidence 211 1 2455666664456777765443
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=94.24 E-value=0.059 Score=41.40 Aligned_cols=88 Identities=16% Similarity=0.181 Sum_probs=55.9
Q ss_pred CCcccchHHHH-HHHH-HHCCCe-EEEEecCCC---CccCCCCCCCchhhhhccCceEEEeecCCCH--HHHHhhhhccC
Q 029198 1 MGGTRFIGVFL-SRLL-VKEGHQ-VTLFTRGKA---PIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSAKG 72 (197)
Q Consensus 1 tGatG~vG~~l-~~~L-~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~l~~~~~~~~ 72 (197)
+|| |.+|... +..+ ...|.+ |++++++++ +.. . ..+ -+...+ |..+. .++.++ .. +
T Consensus 179 ~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~-~--------~~~--lGa~~v--~~~~~~~~~i~~~-~g-g 242 (357)
T 2b5w_A 179 LGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTID-I--------IEE--LDATYV--DSRQTPVEDVPDV-YE-Q 242 (357)
T ss_dssp ECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHH-H--------HHH--TTCEEE--ETTTSCGGGHHHH-SC-C
T ss_pred ECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHH-H--------HHH--cCCccc--CCCccCHHHHHHh-CC-C
Confidence 477 9999999 8777 677987 999999876 421 1 111 123333 44432 225555 44 8
Q ss_pred ccEEEeccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 73 FDVVYDINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 73 ~d~vi~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+|+||++.+.. ......++.++...+++.++.
T Consensus 243 ~Dvvid~~g~~-~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 243 MDFIYEATGFP-KHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp EEEEEECSCCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred CCEEEECCCCh-HHHHHHHHHHhcCCEEEEEeC
Confidence 99999998742 245667777773347776664
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=94.23 E-value=0.044 Score=42.57 Aligned_cols=90 Identities=10% Similarity=0.033 Sum_probs=58.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecC------------------CCHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR------------------KDYDFV 64 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~------------------~~~~~l 64 (197)
|.|-+|...++.|...|.+|++++|++..... +.+ -+..++..+. .+.+.+
T Consensus 191 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~---------~~~--lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l 259 (381)
T 3p2y_A 191 GVGVAGLQALATAKRLGAKTTGYDVRPEVAEQ---------VRS--VGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL 259 (381)
T ss_dssp SCSHHHHHHHHHHHHHTCEEEEECSSGGGHHH---------HHH--TTCEECCCC-------------CHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHH--cCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence 45999999999999999999999998765321 111 1222322111 123456
Q ss_pred HhhhhccCccEEEeccCCCc-----cchHHHHHhCCCCCcEEEEec
Q 029198 65 KSSLSAKGFDVVYDINGREA-----DEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 65 ~~~~~~~~~d~vi~~a~~~~-----~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.+++. ..|+||.++.... --++.+++.|+.-.-+|-++.
T Consensus 260 ~e~l~--~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 260 EDAIT--KFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAG 303 (381)
T ss_dssp HHHHT--TCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred HHHHh--cCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeC
Confidence 67777 9999998763321 125788888884446666664
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=94.19 E-value=0.019 Score=43.11 Aligned_cols=84 Identities=17% Similarity=0.221 Sum_probs=54.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|.+|++.+|++++... +.+ .++..+ +.+++.++++ .+|+|+.+...
T Consensus 164 G~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~---------~~~--~g~~~~-----~~~~l~~~l~--~aDvVi~~~p~ 225 (300)
T 2rir_A 164 GLGRTGMTIARTFAALGANVKVGARSSAHLAR---------ITE--MGLVPF-----HTDELKEHVK--DIDICINTIPS 225 (300)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHH--TTCEEE-----EGGGHHHHST--TCSEEEECCSS
T ss_pred cccHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHH--CCCeEE-----chhhHHHHhh--CCCEEEECCCh
Confidence 46999999999999999999999998643210 011 122222 1234666676 89999988765
Q ss_pred CccchHHHHHhCCCCCcEEEEec
Q 029198 83 EADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
..- .+..++.++....+|.++.
T Consensus 226 ~~i-~~~~~~~mk~g~~lin~a~ 247 (300)
T 2rir_A 226 MIL-NQTVLSSMTPKTLILDLAS 247 (300)
T ss_dssp CCB-CHHHHTTSCTTCEEEECSS
T ss_pred hhh-CHHHHHhCCCCCEEEEEeC
Confidence 322 2345666664456676663
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=94.17 E-value=0.068 Score=41.71 Aligned_cols=90 Identities=14% Similarity=0.072 Sum_probs=57.1
Q ss_pred CcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC----HHHHHhhhhccCccEE
Q 029198 2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSAKGFDVV 76 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~l~~~~~~~~~d~v 76 (197)
|+ |.+|...+..+...|. +|+++++++++... ..+. +... .|..+ .+.+.++....++|+|
T Consensus 193 Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~---------a~~l--Ga~~--i~~~~~~~~~~~~~~~~~g~g~Dvv 258 (398)
T 2dph_A 193 GA-GPVGRCAAAGARLLGAACVIVGDQNPERLKL---------LSDA--GFET--IDLRNSAPLRDQIDQILGKPEVDCG 258 (398)
T ss_dssp CC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH---------HHTT--TCEE--EETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred CC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH---------HHHc--CCcE--EcCCCcchHHHHHHHHhCCCCCCEE
Confidence 64 9999999988888898 99999997665221 1111 2333 34433 3445555444479999
Q ss_pred EeccCCCc-------------cchHHHHHhCCCCCcEEEEec
Q 029198 77 YDINGREA-------------DEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 77 i~~a~~~~-------------~~~~~ll~~~~~~~~~v~~Ss 105 (197)
|++.+... ......++.++...+++.++.
T Consensus 259 id~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp EECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred EECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 99998642 135667777773346665553
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=94.12 E-value=0.24 Score=38.16 Aligned_cols=90 Identities=10% Similarity=0.085 Sum_probs=56.8
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-----HHHHHhhhhccCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-----YDFVKSSLSAKGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~l~~~~~~~~~d 74 (197)
+| +|.+|...+..+...|. +|+++++++++... ..+... -.. .|..+ .+.+.++... ++|
T Consensus 199 ~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~---------~~~lGa-~~v--i~~~~~~~~~~~~~~~~~~~-g~D 264 (374)
T 1cdo_A 199 FG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK---------AKVFGA-TDF--VNPNDHSEPISQVLSKMTNG-GVD 264 (374)
T ss_dssp EC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH---------HHHTTC-CEE--ECGGGCSSCHHHHHHHHHTS-CBS
T ss_pred EC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH---------HHHhCC-ceE--EeccccchhHHHHHHHHhCC-CCC
Confidence 36 49999999999988998 89999987665321 111111 122 23332 2334444333 799
Q ss_pred EEEeccCCCccchHHHHHhCCCC-CcEEEEec
Q 029198 75 VVYDINGREADEVEPILDALPNL-EQFIYCSS 105 (197)
Q Consensus 75 ~vi~~a~~~~~~~~~ll~~~~~~-~~~v~~Ss 105 (197)
+||++++. .......++.++.. .+++.++.
T Consensus 265 ~vid~~g~-~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 265 FSLECVGN-VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp EEEECSCC-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred EEEECCCC-HHHHHHHHHHhhcCCcEEEEEcC
Confidence 99999874 23456777888844 68887764
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=94.11 E-value=0.043 Score=36.23 Aligned_cols=28 Identities=18% Similarity=0.262 Sum_probs=24.0
Q ss_pred Ccc---cchHHHHHHHHHHCCCeEEEEecCC
Q 029198 2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGK 29 (197)
Q Consensus 2 Gat---G~vG~~l~~~L~~~g~~V~~~~r~~ 29 (197)
|+| |.+|..+++.|++.|++|+.++.+.
T Consensus 21 GaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~ 51 (138)
T 1y81_A 21 GASKNPAKYGNIILKDLLSKGFEVLPVNPNY 51 (138)
T ss_dssp TCCSCTTSHHHHHHHHHHHTTCEEEEECTTC
T ss_pred eecCCCCCHHHHHHHHHHHCCCEEEEeCCCC
Confidence 554 8999999999999999988887764
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=94.09 E-value=0.02 Score=43.79 Aligned_cols=27 Identities=19% Similarity=0.345 Sum_probs=22.7
Q ss_pred CCcccchHHHHHHHHHHCC---CeEEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEG---HQVTLFTR 27 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g---~~V~~~~r 27 (197)
.||||++|+.+++.|.+++ .+++++..
T Consensus 9 ~GAtG~iG~~llr~L~~~~~p~~elv~i~s 38 (336)
T 2r00_A 9 FGATGAVGETMLEVLQEREFPVDELFLLAS 38 (336)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred ECCCCHHHHHHHHHHhcCCCCCEEEEEEEC
Confidence 4899999999999999873 57888774
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=94.08 E-value=0.031 Score=40.95 Aligned_cols=61 Identities=8% Similarity=0.034 Sum_probs=42.1
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
|+|..|++++..|++.|. +|++.+|+.++...... .+... . .+++.+++. .+|+||++..
T Consensus 115 GaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~------------~~~~~--~---~~~~~~~~~--~aDiVInatp 175 (253)
T 3u62_A 115 GAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDF------------PVKIF--S---LDQLDEVVK--KAKSLFNTTS 175 (253)
T ss_dssp CCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS------------SCEEE--E---GGGHHHHHH--TCSEEEECSS
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH------------HcccC--C---HHHHHhhhc--CCCEEEECCC
Confidence 459999999999999998 99999998765332221 11111 1 233455666 8999999764
Q ss_pred C
Q 029198 82 R 82 (197)
Q Consensus 82 ~ 82 (197)
.
T Consensus 176 ~ 176 (253)
T 3u62_A 176 V 176 (253)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=94.07 E-value=0.045 Score=41.83 Aligned_cols=29 Identities=17% Similarity=0.308 Sum_probs=24.3
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCC
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGK 29 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~ 29 (197)
+||||++|..+++.|.+. .+++..+..++
T Consensus 10 vGatG~vG~~l~~~L~~~p~~el~~l~s~~ 39 (337)
T 3dr3_A 10 VGASGYAGAELVTYVNRHPHMNITALTVSA 39 (337)
T ss_dssp ETTTSHHHHHHHHHHHHCTTEEEEEEEEET
T ss_pred ECCCChHHHHHHHHHHhCCCCcEEEEEecC
Confidence 499999999999999885 56888886654
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=94.07 E-value=0.14 Score=39.50 Aligned_cols=90 Identities=14% Similarity=0.163 Sum_probs=56.6
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-----HHHHHhhhhccCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-----YDFVKSSLSAKGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~l~~~~~~~~~d 74 (197)
+| +|.+|...+..+...|. +|+++++++++... ..+... -..+ |..+ .+.+.++... ++|
T Consensus 197 ~G-aG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~---------~~~lGa-~~vi--~~~~~~~~~~~~v~~~~~~-g~D 262 (373)
T 2fzw_A 197 FG-LGGVGLAVIMGCKVAGASRIIGVDINKDKFAR---------AKEFGA-TECI--NPQDFSKPIQEVLIEMTDG-GVD 262 (373)
T ss_dssp EC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHH---------HHHHTC-SEEE--CGGGCSSCHHHHHHHHTTS-CBS
T ss_pred EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH---------HHHcCC-ceEe--ccccccccHHHHHHHHhCC-CCC
Confidence 36 49999999998888898 89999987665221 111111 1222 3332 2334444333 799
Q ss_pred EEEeccCCCccchHHHHHhCCCC-CcEEEEec
Q 029198 75 VVYDINGREADEVEPILDALPNL-EQFIYCSS 105 (197)
Q Consensus 75 ~vi~~a~~~~~~~~~ll~~~~~~-~~~v~~Ss 105 (197)
+||++.+. .......++.++.. .+++.++.
T Consensus 263 ~vid~~g~-~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 263 YSFECIGN-VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp EEEECSCC-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred EEEECCCc-HHHHHHHHHhhccCCcEEEEEec
Confidence 99999874 23456777888844 68887764
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=94.04 E-value=0.019 Score=43.72 Aligned_cols=68 Identities=15% Similarity=0.241 Sum_probs=43.1
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEecCCCCccCCCCCCCchhhhhc----cCceEEEeecCCCHHHHHhhhhccCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEF----SSKILHLKGDRKDYDFVKSSLSAKGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~l~~~~~~~~~d 74 (197)
+| +|++|+.++..|+..|. +|+++++++++..... .++... ...+.....| .++++ ++|
T Consensus 11 iG-aG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a-----~DL~~~~~~~~~~v~i~~~~-------~~a~~--~aD 75 (326)
T 3pqe_A 11 IG-AGFVGSSYAFALINQGITDELVVIDVNKEKAMGDV-----MDLNHGKAFAPQPVKTSYGT-------YEDCK--DAD 75 (326)
T ss_dssp EC-CSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHH-----HHHHHTGGGSSSCCEEEEEC-------GGGGT--TCS
T ss_pred EC-CCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHH-----HHHHhccccccCCeEEEeCc-------HHHhC--CCC
Confidence 36 49999999999999986 9999999755421100 001110 1234444333 13455 899
Q ss_pred EEEeccCCC
Q 029198 75 VVYDINGRE 83 (197)
Q Consensus 75 ~vi~~a~~~ 83 (197)
+||.++|..
T Consensus 76 vVvi~ag~p 84 (326)
T 3pqe_A 76 IVCICAGAN 84 (326)
T ss_dssp EEEECCSCC
T ss_pred EEEEecccC
Confidence 999999864
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=94.04 E-value=0.13 Score=41.16 Aligned_cols=88 Identities=18% Similarity=0.294 Sum_probs=63.8
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhh-hhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~~~d~vi~~a~ 81 (197)
|.|.+|..+++.| +.+++|.++.++++... .+.+..++..++.+|-+|++-|.++ ++ ..|+++-+.+
T Consensus 242 GgG~ig~~lA~~L-~~~~~v~iIE~d~~r~~---------~la~~l~~~~Vi~GD~td~~~L~ee~i~--~~D~~ia~T~ 309 (461)
T 4g65_A 242 GGGNIGASLAKRL-EQTYSVKLIERNLQRAE---------KLSEELENTIVFCGDAADQELLTEENID--QVDVFIALTN 309 (461)
T ss_dssp CCSHHHHHHHHHH-TTTSEEEEEESCHHHHH---------HHHHHCTTSEEEESCTTCHHHHHHTTGG--GCSEEEECCS
T ss_pred cchHHHHHHHHHh-hhcCceEEEecCHHHHH---------HHHHHCCCceEEeccccchhhHhhcCch--hhcEEEEccc
Confidence 6799999999998 55699999998866532 2233346789999999999988876 44 8999986654
Q ss_pred CCccchHHHHHhCC----CCCcEEEEec
Q 029198 82 READEVEPILDALP----NLEQFIYCSS 105 (197)
Q Consensus 82 ~~~~~~~~ll~~~~----~~~~~v~~Ss 105 (197)
....|++-.+. ++++++..-.
T Consensus 310 ---~De~Ni~~~llAk~~gv~kvIa~vn 334 (461)
T 4g65_A 310 ---EDETNIMSAMLAKRMGAKKVMVLIQ 334 (461)
T ss_dssp ---CHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred ---CcHHHHHHHHHHHHcCCcccccccc
Confidence 34556555543 7777775544
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=94.04 E-value=0.16 Score=39.22 Aligned_cols=89 Identities=15% Similarity=0.117 Sum_probs=55.9
Q ss_pred CcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCC----C-HHHHHhhhhccCccE
Q 029198 2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK----D-YDFVKSSLSAKGFDV 75 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----~-~~~l~~~~~~~~~d~ 75 (197)
| +|.+|...+..+...|. +|+++++++++... ..+... -..+ |.. + .+.+.++... ++|+
T Consensus 199 G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~---------a~~lGa-~~vi--~~~~~~~~~~~~i~~~t~g-g~Dv 264 (373)
T 1p0f_A 199 G-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPK---------AIELGA-TECL--NPKDYDKPIYEVICEKTNG-GVDY 264 (373)
T ss_dssp C-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHH---------HHHTTC-SEEE--CGGGCSSCHHHHHHHHTTS-CBSE
T ss_pred C-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHH---------HHHcCC-cEEE--ecccccchHHHHHHHHhCC-CCCE
Confidence 6 49999999998888898 89999987665321 111111 1222 332 2 2334444433 8999
Q ss_pred EEeccCCCccchHHHHHhCCCC-CcEEEEec
Q 029198 76 VYDINGREADEVEPILDALPNL-EQFIYCSS 105 (197)
Q Consensus 76 vi~~a~~~~~~~~~ll~~~~~~-~~~v~~Ss 105 (197)
||++.+. .......++.++.. .+++.++.
T Consensus 265 vid~~g~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 265 AVECAGR-IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp EEECSCC-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred EEECCCC-HHHHHHHHHHHhcCCCEEEEEcc
Confidence 9999874 23456777777744 68887664
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=94.03 E-value=0.12 Score=40.45 Aligned_cols=62 Identities=24% Similarity=0.258 Sum_probs=46.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|.|.+|..+++.+.+.|++|++++ .+......+ ......+.+++.|.+.+.++.+ .+|+|+.
T Consensus 31 GgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~-----------ad~~~~~~~~~~d~~~l~~~a~--~~d~i~~ 92 (403)
T 3k5i_A 31 GGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQI-----------SAHDGHVTGSFKEREAVRQLAK--TCDVVTA 92 (403)
T ss_dssp CCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGG-----------CCSSCCEESCTTCHHHHHHHHT--TCSEEEE
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHh-----------ccccceeecCCCCHHHHHHHHH--hCCEEEE
Confidence 458999999999999999999999 544322111 1222456789999999999998 7888763
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=94.02 E-value=0.013 Score=44.02 Aligned_cols=68 Identities=9% Similarity=0.037 Sum_probs=44.2
Q ss_pred CcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|+ |.+|..++..|++.|. +|++.+|+.++...... ....... +..+.+++.+.+. ++|+||++.
T Consensus 148 Ga-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~--------~~~~~~~----~~~~~~~~~~~~~--~aDivIn~t 212 (297)
T 2egg_A 148 GA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVR--------EGDERRS----AYFSLAEAETRLA--EYDIIINTT 212 (297)
T ss_dssp CC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHH--------HSCSSSC----CEECHHHHHHTGG--GCSEEEECS
T ss_pred Cc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH--------HhhhccC----ceeeHHHHHhhhc--cCCEEEECC
Confidence 54 8899999999999997 99999998655321100 0001000 1123345666666 899999998
Q ss_pred CCCc
Q 029198 81 GREA 84 (197)
Q Consensus 81 ~~~~ 84 (197)
+...
T Consensus 213 ~~~~ 216 (297)
T 2egg_A 213 SVGM 216 (297)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 7653
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=93.97 E-value=0.06 Score=40.69 Aligned_cols=73 Identities=15% Similarity=0.132 Sum_probs=46.7
Q ss_pred CcccchHHHHHHHHHHCCC-eEEEEecCCCC---ccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAP---IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~-~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
|+ |..|++++..|.+.|. +|+++.|+++. ..... .++.. .........++.+.+.+.+.+. .+|+||
T Consensus 155 GA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la-----~~~~~-~~~~~v~~~~~~~l~~~~~~l~--~~DiII 225 (312)
T 3t4e_A 155 GA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFA-----KRVNE-NTDCVVTVTDLADQHAFTEALA--SADILT 225 (312)
T ss_dssp CC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHH-----HHHHH-HSSCEEEEEETTCHHHHHHHHH--HCSEEE
T ss_pred Cc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHH-----HHhhh-ccCcceEEechHhhhhhHhhcc--CceEEE
Confidence 54 8999999999999997 89999998332 11100 00111 1123344456666555556666 789999
Q ss_pred eccCCC
Q 029198 78 DINGRE 83 (197)
Q Consensus 78 ~~a~~~ 83 (197)
|+....
T Consensus 226 NaTp~G 231 (312)
T 3t4e_A 226 NGTKVG 231 (312)
T ss_dssp ECSSTT
T ss_pred ECCcCC
Confidence 986553
|
| >1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} | Back alignment and structure |
|---|
Probab=93.97 E-value=0.11 Score=39.60 Aligned_cols=82 Identities=11% Similarity=0.055 Sum_probs=52.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|++|++.+|+.... .. ..+. .. ++.+++. .+|+|+.+...
T Consensus 153 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~-----~~---~l~ell~--~aDvV~~~~p~ 208 (331)
T 1xdw_A 153 GLGRIGRVAAQIFHGMGATVIGEDVFEIKG---IE-----------DYCT-----QV---SLDEVLE--KSDIITIHAPY 208 (331)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCCS---CT-----------TTCE-----EC---CHHHHHH--HCSEEEECCCC
T ss_pred CcCHHHHHHHHHHHHCCCEEEEECCCccHH---HH-----------hccc-----cC---CHHHHHh--hCCEEEEecCC
Confidence 579999999999999999999999986542 11 0111 11 2445565 77888866543
Q ss_pred Cc--cc--hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EA--DE--VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~--~~--~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+. .. ....+..++.-.-+|.+|...+
T Consensus 209 t~~t~~li~~~~l~~mk~ga~lin~srg~~ 238 (331)
T 1xdw_A 209 IKENGAVVTRDFLKKMKDGAILVNCARGQL 238 (331)
T ss_dssp CTTTCCSBCHHHHHTSCTTEEEEECSCGGG
T ss_pred chHHHHHhCHHHHhhCCCCcEEEECCCccc
Confidence 21 11 1456666774457777776554
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=93.90 E-value=0.28 Score=37.78 Aligned_cols=90 Identities=14% Similarity=0.171 Sum_probs=56.7
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-----HHHHHhhhhccCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-----YDFVKSSLSAKGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~l~~~~~~~~~d 74 (197)
+| +|.+|...+..+...|. +|+++++++++... ..+... -.. .|..+ .+.+.++... ++|
T Consensus 198 ~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~---------~~~lGa-~~v--i~~~~~~~~~~~~~~~~~~~-g~D 263 (374)
T 2jhf_A 198 FG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAK---------AKEVGA-TEC--VNPQDYKKPIQEVLTEMSNG-GVD 263 (374)
T ss_dssp EC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH---------HHHTTC-SEE--ECGGGCSSCHHHHHHHHTTS-CBS
T ss_pred EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH---------HHHhCC-ceE--ecccccchhHHHHHHHHhCC-CCc
Confidence 36 59999999999988998 89999987665321 111111 122 23332 2334444333 799
Q ss_pred EEEeccCCCccchHHHHHhCCCC-CcEEEEec
Q 029198 75 VVYDINGREADEVEPILDALPNL-EQFIYCSS 105 (197)
Q Consensus 75 ~vi~~a~~~~~~~~~ll~~~~~~-~~~v~~Ss 105 (197)
+||++++. .......++.++.. .+++.++.
T Consensus 264 ~vid~~g~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 264 FSFEVIGR-LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp EEEECSCC-HHHHHHHHHHBCTTTCEEEECSC
T ss_pred EEEECCCC-HHHHHHHHHHhhcCCcEEEEecc
Confidence 99999974 23456777888844 68887663
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=93.83 E-value=0.1 Score=41.05 Aligned_cols=61 Identities=16% Similarity=0.113 Sum_probs=46.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|.|.+|..++..+.+.|++|++++..+...... . .-..+..|+.|.+.+.++.+ ++|+|+.
T Consensus 42 G~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~-----------~--ad~~~~~~~~d~~~l~~~a~--~~D~V~~ 102 (419)
T 4e4t_A 42 GGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGA-----------V--ADRHLRAAYDDEAALAELAG--LCEAVST 102 (419)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHH-----------H--SSEEECCCTTCHHHHHHHHH--HCSEEEE
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCcCchhh-----------h--CCEEEECCcCCHHHHHHHHh--cCCEEEE
Confidence 468999999999999999999998655432111 1 12455688999999999986 8999984
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=93.78 E-value=0.15 Score=38.53 Aligned_cols=84 Identities=14% Similarity=0.031 Sum_probs=54.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|++|++.+|++++.. .. ..++.. .+ +.++++ ..|+|+.+.-.
T Consensus 149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~----------~~--~~g~~~-----~~---l~ell~--~aDvVvl~~P~ 206 (313)
T 2ekl_A 149 GFGRIGTKVGIIANAMGMKVLAYDILDIREK----------AE--KINAKA-----VS---LEELLK--NSDVISLHVTV 206 (313)
T ss_dssp SCSHHHHHHHHHHHHTTCEEEEECSSCCHHH----------HH--HTTCEE-----CC---HHHHHH--HCSEEEECCCC
T ss_pred eeCHHHHHHHHHHHHCCCEEEEECCCcchhH----------HH--hcCcee-----cC---HHHHHh--hCCEEEEeccC
Confidence 5799999999999999999999999765411 00 012221 12 345565 78998876543
Q ss_pred Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+.. . .+..+..++.-..+|.+|+..+
T Consensus 207 ~~~t~~li~~~~l~~mk~ga~lIn~arg~~ 236 (313)
T 2ekl_A 207 SKDAKPIIDYPQFELMKDNVIIVNTSRAVA 236 (313)
T ss_dssp CTTSCCSBCHHHHHHSCTTEEEEESSCGGG
T ss_pred ChHHHHhhCHHHHhcCCCCCEEEECCCCcc
Confidence 221 1 1456677774457888887554
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=93.73 E-value=0.15 Score=37.95 Aligned_cols=48 Identities=15% Similarity=0.244 Sum_probs=38.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+|+++.+|..++..|+..|..|+...++.. .+.+... ..|+||.+.
T Consensus 166 vGrs~iVG~p~A~lL~~~gAtVtv~h~~t~--------------------------------~L~~~~~--~ADIVI~Av 211 (285)
T 3p2o_A 166 IGASNIVGRPMATMLLNAGATVSVCHIKTK--------------------------------DLSLYTR--QADLIIVAA 211 (285)
T ss_dssp ECCCTTTHHHHHHHHHHTTCEEEEECTTCS--------------------------------CHHHHHT--TCSEEEECS
T ss_pred ECCCchHHHHHHHHHHHCCCeEEEEeCCch--------------------------------hHHHHhh--cCCEEEECC
Confidence 478888999999999999999988876422 2445666 899999988
Q ss_pred CC
Q 029198 81 GR 82 (197)
Q Consensus 81 ~~ 82 (197)
+.
T Consensus 212 g~ 213 (285)
T 3p2o_A 212 GC 213 (285)
T ss_dssp SC
T ss_pred CC
Confidence 75
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=93.68 E-value=0.082 Score=40.63 Aligned_cols=69 Identities=16% Similarity=0.121 Sum_probs=44.3
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH--HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~l~~~~~~~~~d~vi 77 (197)
+|| |.+|...+..+... |.+|+++++++++... ..+... -.. .|..+. +.+.++....++|+||
T Consensus 193 ~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~---------~~~lGa-~~v--i~~~~~~~~~v~~~~~g~g~Dvvi 259 (359)
T 1h2b_A 193 VGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKL---------AERLGA-DHV--VDARRDPVKQVMELTRGRGVNVAM 259 (359)
T ss_dssp ECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHH---------HHHTTC-SEE--EETTSCHHHHHHHHTTTCCEEEEE
T ss_pred ECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH---------HHHhCC-CEE--EeccchHHHHHHHHhCCCCCcEEE
Confidence 377 89999999988888 9999999987655211 111111 122 244443 3444444334799999
Q ss_pred eccCC
Q 029198 78 DINGR 82 (197)
Q Consensus 78 ~~a~~ 82 (197)
++.+.
T Consensus 260 d~~G~ 264 (359)
T 1h2b_A 260 DFVGS 264 (359)
T ss_dssp ESSCC
T ss_pred ECCCC
Confidence 99875
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=93.64 E-value=0.22 Score=37.49 Aligned_cols=84 Identities=19% Similarity=0.092 Sum_probs=54.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|++|++.+|++++.. ..+ .++.. .+ +.++++ ..|+|+.+...
T Consensus 149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~----------~~~--~g~~~-----~~---l~ell~--~aDvV~l~~p~ 206 (307)
T 1wwk_A 149 GFGRIGYQVAKIANALGMNILLYDPYPNEER----------AKE--VNGKF-----VD---LETLLK--ESDVVTIHVPL 206 (307)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCHHH----------HHH--TTCEE-----CC---HHHHHH--HCSEEEECCCC
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCChhh----------Hhh--cCccc-----cC---HHHHHh--hCCEEEEecCC
Confidence 5799999999999999999999999765410 000 12221 12 445566 78998876543
Q ss_pred Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+.. . ....+..++.-..+|.+|+..+
T Consensus 207 ~~~t~~li~~~~l~~mk~ga~lin~arg~~ 236 (307)
T 1wwk_A 207 VESTYHLINEERLKLMKKTAILINTSRGPV 236 (307)
T ss_dssp STTTTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred ChHHhhhcCHHHHhcCCCCeEEEECCCCcc
Confidence 221 1 1346677774457888887554
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=93.58 E-value=0.079 Score=39.71 Aligned_cols=29 Identities=14% Similarity=0.059 Sum_probs=26.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|.+|..++..|++.|++|++.+|++++
T Consensus 14 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~ 42 (303)
T 3g0o_A 14 GLGSMGMGAARSCLRAGLSTWGADLNPQA 42 (303)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence 57999999999999999999999998764
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=93.54 E-value=0.25 Score=38.69 Aligned_cols=90 Identities=13% Similarity=0.102 Sum_probs=56.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCC-------------CH-------H
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-------------DY-------D 62 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-------------~~-------~ 62 (197)
|.|-+|...++.+...|.+|+++++++..... ..+. +..++..|.. +. +
T Consensus 179 GaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~---------~~~l--Ga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 247 (401)
T 1x13_A 179 GAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQ---------VQSM--GAEFLELDFKEEAGSGDGYAKVMSDAFIKAEME 247 (401)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCGGGHHH---------HHHT--TCEECCC--------CCHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH---------HHHc--CCEEEEecccccccccccchhhccHHHHHHHHH
Confidence 35999999999999999999999998765221 1111 2233222211 11 1
Q ss_pred HHHhhhhccCccEEEeccCCC---ccc--hHHHHHhCCCCCcEEEEec
Q 029198 63 FVKSSLSAKGFDVVYDINGRE---ADE--VEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 63 ~l~~~~~~~~~d~vi~~a~~~---~~~--~~~ll~~~~~~~~~v~~Ss 105 (197)
.+.+++. +.|+||.++... ... ++..++.|+.-..+|.++.
T Consensus 248 ~l~e~~~--~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~ 293 (401)
T 1x13_A 248 LFAAQAK--EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAA 293 (401)
T ss_dssp HHHHHHH--HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred HHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcC
Confidence 3556666 799999986332 112 3668888884457777774
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=93.53 E-value=0.063 Score=41.10 Aligned_cols=92 Identities=12% Similarity=0.047 Sum_probs=56.7
Q ss_pred CcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEec
Q 029198 2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~~ 79 (197)
| +|.+|...+..+...|. +|+++++++++.. ...+. .--..+..+-.+ .+.+.++....++|+||++
T Consensus 174 G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~---------~~~~l-Ga~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~ 242 (352)
T 3fpc_A 174 G-IGPVGLMSVAGANHLGAGRIFAVGSRKHCCD---------IALEY-GATDIINYKNGDIVEQILKATDGKGVDKVVIA 242 (352)
T ss_dssp C-CSHHHHHHHHHHHTTTCSSEEEECCCHHHHH---------HHHHH-TCCEEECGGGSCHHHHHHHHTTTCCEEEEEEC
T ss_pred C-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHH---------HHHHh-CCceEEcCCCcCHHHHHHHHcCCCCCCEEEEC
Confidence 5 59999999998888898 8999988765421 01111 111222221112 2344555554579999999
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEec
Q 029198 80 NGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.+.. ......++.++.-.+++.++.
T Consensus 243 ~g~~-~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 243 GGDV-HTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp SSCT-THHHHHHHHEEEEEEEEECCC
T ss_pred CCCh-HHHHHHHHHHhcCCEEEEecc
Confidence 8752 456677787773357776653
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=93.48 E-value=0.063 Score=40.52 Aligned_cols=87 Identities=15% Similarity=0.167 Sum_probs=55.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+||+|.+|...+..+...|.+|+++++.++ .. ...+.... . ..|..+.+.+.+.+. ++|+||++.
T Consensus 159 ~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~--~~--------~~~~lGa~-~--~i~~~~~~~~~~~~~--g~D~v~d~~ 223 (321)
T 3tqh_A 159 HAGAGGVGHLAIQLAKQKGTTVITTASKRN--HA--------FLKALGAE-Q--CINYHEEDFLLAIST--PVDAVIDLV 223 (321)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEECHHH--HH--------HHHHHTCS-E--EEETTTSCHHHHCCS--CEEEEEESS
T ss_pred EcCCcHHHHHHHHHHHHcCCEEEEEeccch--HH--------HHHHcCCC-E--EEeCCCcchhhhhcc--CCCEEEECC
Confidence 489999999999999999999999885432 11 11111111 1 235555543455555 899999998
Q ss_pred CCCccchHHHHHhCCCCCcEEEEe
Q 029198 81 GREADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
|.. .....++.++...+++.++
T Consensus 224 g~~--~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 224 GGD--VGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp CHH--HHHHHGGGEEEEEEEEECC
T ss_pred CcH--HHHHHHHhccCCCEEEEeC
Confidence 752 3355666666335777664
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.48 E-value=0.061 Score=41.10 Aligned_cols=84 Identities=12% Similarity=0.056 Sum_probs=53.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|++|++.+|+..+.. .. ..++.. . ++.++++ ..|+|+.+...
T Consensus 172 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~----------~~--~~g~~~-----~---~l~ell~--~aDvV~l~~P~ 229 (335)
T 2g76_A 172 GLGRIGREVATRMQSFGMKTIGYDPIISPEV----------SA--SFGVQQ-----L---PLEEIWP--LCDFITVHTPL 229 (335)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECSSSCHHH----------HH--HTTCEE-----C---CHHHHGG--GCSEEEECCCC
T ss_pred eECHHHHHHHHHHHHCCCEEEEECCCcchhh----------hh--hcCcee-----C---CHHHHHh--cCCEEEEecCC
Confidence 5799999999999999999999998755410 00 012221 1 2456666 78998876544
Q ss_pred Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+.. . .+..+..++.-.-+|.+|+..+
T Consensus 230 t~~t~~li~~~~l~~mk~gailIN~arg~v 259 (335)
T 2g76_A 230 LPSTTGLLNDNTFAQCKKGVRVVNCARGGI 259 (335)
T ss_dssp CTTTTTSBCHHHHTTSCTTEEEEECSCTTS
T ss_pred CHHHHHhhCHHHHhhCCCCcEEEECCCccc
Confidence 321 1 1345666664457788887554
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=93.44 E-value=0.53 Score=36.28 Aligned_cols=61 Identities=16% Similarity=0.086 Sum_probs=45.4
Q ss_pred ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
+|..|..+++.|.+.|++|++++..+......+ . -..+..|..|.+.+.++.. ++|.|+..
T Consensus 9 ~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~------------~-~~~~~~~~~d~~~l~~~~~--~~d~v~~~ 69 (380)
T 3ax6_A 9 GGQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQV------------A-DEQIVAGFFDSERIEDLVK--GSDVTTYD 69 (380)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESSTTCTTGGG------------S-SEEEECCTTCHHHHHHHHH--TCSEEEES
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh------------C-ceEEECCCCCHHHHHHHHh--cCCEEEec
Confidence 478899999999999999999998654311111 1 1345678889999988886 89998854
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=93.35 E-value=0.043 Score=41.30 Aligned_cols=29 Identities=24% Similarity=0.621 Sum_probs=26.7
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|.+|..++..|++.|++|++.+|++++
T Consensus 16 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~ 44 (306)
T 3l6d_A 16 GLGAMGTIMAQVLLKQGKRVAIWNRSPGK 44 (306)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 57999999999999999999999998765
|
| >4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* | Back alignment and structure |
|---|
Probab=93.18 E-value=0.46 Score=36.38 Aligned_cols=62 Identities=18% Similarity=0.162 Sum_probs=42.8
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecC-CCHHHHHhhhhccCccEEEec
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR-KDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|+|..|..++..+.+.|++|++++.++......+. -+++..|. .|.+.+....+ ++|.|+-.
T Consensus 8 Ggg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~a-------------D~~~~~~~~~d~~~~~~~~~--~~D~v~~~ 70 (363)
T 4ffl_A 8 GGKLQGFEAAYLSKKAGMKVVLVDKNPQALIRNYA-------------DEFYCFDVIKEPEKLLELSK--RVDAVLPV 70 (363)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTTS-------------SEEEECCTTTCHHHHHHHHT--SSSEEEEC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCCCChhHhhC-------------CEEEECCCCcCHHHHHHHhc--CCCEEEEC
Confidence 35889999999999999999999987665332221 12344443 46666666655 89988754
|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
Probab=93.15 E-value=0.48 Score=36.60 Aligned_cols=65 Identities=11% Similarity=-0.058 Sum_probs=48.3
Q ss_pred ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
+|..|..+++.+.+.|++|++++..+....... .-..+..+..|.+.+.++.++.++|.|+....
T Consensus 19 ~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~-------------~d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~e 83 (391)
T 1kjq_A 19 SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV-------------AHRSHVINMLDGDALRRVVELEKPHYIVPEIE 83 (391)
T ss_dssp CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-------------SSEEEECCTTCHHHHHHHHHHHCCSEEEECSS
T ss_pred CCHHHHHHHHHHHHcCCEEEEEECCCCCchhhh-------------ccceEECCCCCHHHHHHHHHHcCCCEEEECCC
Confidence 378899999999999999999988754421110 11345678889999988887679999987543
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=93.14 E-value=0.15 Score=38.81 Aligned_cols=88 Identities=9% Similarity=0.049 Sum_probs=54.9
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEEe
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi~ 78 (197)
|+ |.+|...+..+...|.+|+++++++++... ..+.... .. .|..+. +.+.+. .. ++|.||.
T Consensus 174 Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~lGa~-~~--i~~~~~~~~~~~~~~-~g-~~d~vid 238 (340)
T 3s2e_A 174 GI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNL---------ARRLGAE-VA--VNARDTDPAAWLQKE-IG-GAHGVLV 238 (340)
T ss_dssp CC-STTHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHTTCS-EE--EETTTSCHHHHHHHH-HS-SEEEEEE
T ss_pred CC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHH---------HHHcCCC-EE--EeCCCcCHHHHHHHh-CC-CCCEEEE
Confidence 55 889999999999999999999998665321 1111111 22 233432 333332 22 8999999
Q ss_pred ccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 79 INGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+++. .......++.++...+++.++.
T Consensus 239 ~~g~-~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 239 TAVS-PKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp SSCC-HHHHHHHHHHEEEEEEEEECSC
T ss_pred eCCC-HHHHHHHHHHhccCCEEEEeCC
Confidence 8863 2445667777773356776653
|
| >3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=93.10 E-value=0.078 Score=41.20 Aligned_cols=27 Identities=22% Similarity=0.208 Sum_probs=24.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGK 29 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~ 29 (197)
|.|.+|+.+++.|...|++|.+.++..
T Consensus 126 GlG~IG~~vA~~l~a~G~~V~~~d~~~ 152 (381)
T 3oet_A 126 GVGNVGSRLQTRLEALGIRTLLCDPPR 152 (381)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECHHH
T ss_pred eECHHHHHHHHHHHHCCCEEEEECCCh
Confidence 679999999999999999999998853
|
| >1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=93.09 E-value=0.42 Score=36.38 Aligned_cols=82 Identities=13% Similarity=0.025 Sum_probs=54.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|++|++.+|+.... .. ..+. .. ++.++++ ..|+|+.+...
T Consensus 152 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~-----~~---~l~ell~--~aDvV~~~~P~ 207 (333)
T 1dxy_A 152 GTGHIGQVAIKLFKGFGAKVIAYDPYPMKG---DH-----------PDFD-----YV---SLEDLFK--QSDVIDLHVPG 207 (333)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCSS---CC-----------TTCE-----EC---CHHHHHH--HCSEEEECCCC
T ss_pred CcCHHHHHHHHHHHHCCCEEEEECCCcchh---hH-----------hccc-----cC---CHHHHHh--cCCEEEEcCCC
Confidence 579999999999999999999999987542 11 0111 11 2445566 78888876544
Q ss_pred Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+.. + .+..+..|+.-..+|.+|+..+
T Consensus 208 ~~~t~~li~~~~l~~mk~ga~lIn~srg~~ 237 (333)
T 1dxy_A 208 IEQNTHIINEAAFNLMKPGAIVINTARPNL 237 (333)
T ss_dssp CGGGTTSBCHHHHHHSCTTEEEEECSCTTS
T ss_pred chhHHHHhCHHHHhhCCCCcEEEECCCCcc
Confidence 321 1 1446677774457888887554
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=93.08 E-value=0.22 Score=36.98 Aligned_cols=49 Identities=24% Similarity=0.299 Sum_probs=37.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+|+++.+|..++..|+..|..|+...++.. .+.+... ..|+||.+.
T Consensus 167 IG~s~iVG~p~A~lL~~~gAtVtv~hs~t~--------------------------------~L~~~~~--~ADIVI~Av 212 (285)
T 3l07_A 167 VGASNVVGKPVSQLLLNAKATVTTCHRFTT--------------------------------DLKSHTT--KADILIVAV 212 (285)
T ss_dssp ECCCTTTHHHHHHHHHHTTCEEEEECTTCS--------------------------------SHHHHHT--TCSEEEECC
T ss_pred ECCCchhHHHHHHHHHHCCCeEEEEeCCch--------------------------------hHHHhcc--cCCEEEECC
Confidence 377888999999999999999988865421 2456666 899999988
Q ss_pred CCC
Q 029198 81 GRE 83 (197)
Q Consensus 81 ~~~ 83 (197)
+..
T Consensus 213 g~p 215 (285)
T 3l07_A 213 GKP 215 (285)
T ss_dssp CCT
T ss_pred CCC
Confidence 753
|
| >2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* | Back alignment and structure |
|---|
Probab=93.05 E-value=0.41 Score=37.66 Aligned_cols=65 Identities=17% Similarity=0.087 Sum_probs=48.4
Q ss_pred ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
+|.+|..+++.+.+.|++|++++..+..... .. .-..+..|+.|.+.+.++.++.++|.|+....
T Consensus 27 ~g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~-----------~~--ad~~~~~~~~d~~~l~~~~~~~~~d~V~~~~e 91 (433)
T 2dwc_A 27 SGELGKEIAIEAQRLGVEVVAVDRYANAPAM-----------QV--AHRSYVGNMMDKDFLWSVVEREKPDAIIPEIE 91 (433)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESSTTCHHH-----------HH--SSEEEESCTTCHHHHHHHHHHHCCSEEEECSS
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCCChhh-----------hh--cceEEECCCCCHHHHHHHHHHcCCCEEEECcc
Confidence 4788999999999999999999887544110 01 11345678889999988887679999987554
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=93.03 E-value=0.069 Score=40.28 Aligned_cols=30 Identities=17% Similarity=0.315 Sum_probs=25.9
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~ 31 (197)
+|| |.+|..++..|+..|+ +|+++++++++
T Consensus 8 IGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~ 38 (309)
T 1ur5_A 8 IGA-GFVGSTTAHWLAAKELGDIVLLDIVEGV 38 (309)
T ss_dssp ECC-SHHHHHHHHHHHHTTCSEEEEECSSSSH
T ss_pred ECC-CHHHHHHHHHHHHCCCCeEEEEeCCccH
Confidence 476 9999999999999996 89999987654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 197 | ||||
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 4e-16 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 1e-14 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-13 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 3e-11 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 4e-11 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-11 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 5e-10 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 2e-07 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 3e-07 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 7e-07 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 3e-06 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 4e-06 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 8e-06 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 3e-05 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 3e-05 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 1e-04 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 3e-04 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 9e-04 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 0.001 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 0.002 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 0.003 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 0.004 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 0.004 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 0.004 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 0.004 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 73.3 bits (179), Expect = 4e-16
Identities = 40/223 (17%), Positives = 71/223 (31%), Gaps = 31/223 (13%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T G +L+ L+++G++V R + + Q+ + K GD D
Sbjct: 8 GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDT 67
Query: 62 DFVKSSLSAKGFDVVYDINGREADEV---EP-------------ILDA-----LPNLEQF 100
+ L D VY++ V P +L+A L +F
Sbjct: 68 SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRF 127
Query: 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIY 155
S++ +Y +P ET P+S + KL + ES G+ +
Sbjct: 128 YQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHE 187
Query: 156 GPL-----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193
P + + + G+ + GH K
Sbjct: 188 SPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK 230
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.5 bits (167), Expect = 1e-14
Identities = 43/223 (19%), Positives = 78/223 (34%), Gaps = 45/223 (20%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GG F+G L+ L+ +GH+VT+ + + I H + ++
Sbjct: 8 GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-----------HWIGHENFELINH 56
Query: 62 DFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------QFIYC 103
D V+ D +Y + PI N + +
Sbjct: 57 DVVEPLY--IEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLLLA 113
Query: 104 SSAGVYLKSDLLPHCE-----TDTVDPKSR-HKGKLNTESVL----ESKGVNWTSLRPVY 153
S++ VY ++ P E + + P++ +GK E++ + +GV R
Sbjct: 114 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 173
Query: 154 IYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193
+GP +N V F + G P+ + GSG Q +V
Sbjct: 174 TFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVS 216
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 66.0 bits (160), Expect = 1e-13
Identities = 35/215 (16%), Positives = 67/215 (31%), Gaps = 23/215 (10%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ESDQEFAEFSSKILHLKGDRKD 60
GG FIG R L+ + + G ++ + ++ + GD +D
Sbjct: 7 GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRD 66
Query: 61 YDFVKSS---------LSAKGFDVVYDINGREADEVEP-----ILDAL--PNLEQFIYCS 104
+ +A+ E +L + + ++ S
Sbjct: 67 AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVS 126
Query: 105 SAGVYLKSDLLPHCETDTVDP-----KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPL- 158
+ VY D E+ ++P S+ L + + G++ R YGP
Sbjct: 127 TNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQ 186
Query: 159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193
+ + F L G +P+ G G V + H
Sbjct: 187 HPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTD 221
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.2 bits (142), Expect = 3e-11
Identities = 33/224 (14%), Positives = 66/224 (29%), Gaps = 32/224 (14%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
G T G +L+ L+++G++V R + ++ A + GD D
Sbjct: 8 GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTD 67
Query: 61 YDFVKSSLSAKGFDVV-------------------YDINGREADEVEPILDA--LPNLEQ 99
+ ++ + D++G + + L N +
Sbjct: 68 STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVK 127
Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
F S++ +Y K +P ET P+S + KL ++ E+ + +
Sbjct: 128 FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNH 187
Query: 155 YGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193
P + G+ GH K
Sbjct: 188 ESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAK 231
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 58.4 bits (140), Expect = 4e-11
Identities = 36/220 (16%), Positives = 64/220 (29%), Gaps = 26/220 (11%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G FIG L L+K +V + L + S ++GD ++
Sbjct: 23 GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL 82
Query: 62 DFV-KSSLSAKGFDVVYDINGREADEVEPILDALPNLE---------------QFIYCSS 105
D + + +PI N++ F Y +S
Sbjct: 83 DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 142
Query: 106 AGVYLKSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTSLRPVYIYGP--- 157
+ Y LP E P S ++ +L + G + LR ++G
Sbjct: 143 SSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQD 202
Query: 158 --LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKVR 195
Y V + + G + I G G +++
Sbjct: 203 PNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT 242
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 58.6 bits (141), Expect = 5e-11
Identities = 37/237 (15%), Positives = 65/237 (27%), Gaps = 51/237 (21%)
Query: 2 GGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
GG FIG + R ++K V + A + L S+ F D
Sbjct: 7 GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNF------EHADIC 60
Query: 60 DYDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNLE------------------ 98
D + D V + + P N+
Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120
Query: 99 ------QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----------KGKLNTESVL-- 139
+F + S+ VY E P K +++ ++
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 140 --ESKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193
+ G+ YGP ++ + G+P+PI G G Q+ +V+
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 55.3 bits (132), Expect = 5e-10
Identities = 36/230 (15%), Positives = 68/230 (29%), Gaps = 64/230 (27%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G +G + R L + G + + + D
Sbjct: 9 GHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDS 43
Query: 62 DFVKSSLSAKGFDVVY----------DINGREADEVEPILDALPNL---------EQFIY 102
V +++ D VY N AD + + N+ + ++
Sbjct: 44 RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLF 103
Query: 103 CSSAGVYLKSDLLPHCETDTVDPKSRH------KGKLNTESVLES----KGVNWTSLRPV 152
S+ +Y K P E++ + K+ + ES G ++ S+ P
Sbjct: 104 LGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPT 163
Query: 153 YIYGPL-NYNPVEEWFFHRLK---------AGRPIPIPGSGIQVTQLGHV 192
+YGP N++P L + + GSG + + HV
Sbjct: 164 NLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHV 213
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 48.1 bits (113), Expect = 2e-07
Identities = 28/224 (12%), Positives = 53/224 (23%), Gaps = 33/224 (14%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
G T G +L+ L+ +G++V R + Q + + ++ L D D
Sbjct: 8 GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTD 67
Query: 61 YDFVKSSLSAKGFDVV----------------------YDINGREADEVEPILDALPNLE 98
++ + D V E
Sbjct: 68 ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT 127
Query: 99 QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRPVY 153
Y + + S P ET P+S + T + E+ G+ +
Sbjct: 128 VKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFN 187
Query: 154 IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192
P + + G+ G
Sbjct: 188 HESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFA 231
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.6 bits (109), Expect = 3e-07
Identities = 22/155 (14%), Positives = 49/155 (31%), Gaps = 8/155 (5%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T G+ V+ G++VT+ R + + + P + + K
Sbjct: 10 GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQD 69
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
+ L D+ E +++ + C+SA + +P
Sbjct: 70 AVI--VLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPR--- 124
Query: 122 TVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYG 156
++ + VL G+ + ++ P +I
Sbjct: 125 ---LQAVTDDHIRMHKVLRESGLKYVAVMPPHIGD 156
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 46.1 bits (108), Expect = 7e-07
Identities = 35/232 (15%), Positives = 68/232 (29%), Gaps = 47/232 (20%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GG+ +IG L++ GH V + K + + + ++GD
Sbjct: 7 GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPT-------FVEGDI 59
Query: 59 KDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPN---------------LEQF 100
++ + L D V + +P+ N ++ F
Sbjct: 60 RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119
Query: 101 IYCSSAGVYLKSDLLPHCETDTVDP-------KSRHKGKLNTESVLESKGVNWTSLRPVY 153
I+ SSA VY +P+ E+ ++ T+ + LR
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN 179
Query: 154 IYGPLNYNPVEEW----------FFHRLKAGR--PIPIPGSGIQVTQLGHVK 193
G + E + ++ GR + I G+ V+
Sbjct: 180 PVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 44.3 bits (103), Expect = 3e-06
Identities = 40/238 (16%), Positives = 73/238 (30%), Gaps = 62/238 (26%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
GG F+G L+ + +G + L +G L + EF + GD
Sbjct: 7 GGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEF---------VHGD 57
Query: 58 RKDYDFVKSSLSAKGFDVVYDINGREADEV---EPILDALPNLE---------------- 98
++ + V ++ D + + G+ A P +D N+
Sbjct: 58 IRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNC 117
Query: 99 QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL------------------- 139
IY S+ VY + + ET+T + + L
Sbjct: 118 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 177
Query: 140 --ESKGVNWTSLRPVYIYGPLNYNPVEEWFFH---------RLKAGRPIPIPGSGIQV 186
G+N R +YG + ++ + + +P I G+G QV
Sbjct: 178 YARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQV 235
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 43.8 bits (102), Expect = 4e-06
Identities = 33/221 (14%), Positives = 66/221 (29%), Gaps = 34/221 (15%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T G +L++LL+++G++V ++ I + GD D
Sbjct: 7 GITGQDGAYLAKLLLEKGYRVHGLVARRSSDT-----RWRLRELGIEGDIQYEDGDMADA 61
Query: 62 DFVKSSLSAKGFDVV-------------------YDINGREADEVEPILDALPNLEQFIY 102
V+ ++ V ++G + + +F
Sbjct: 62 CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121
Query: 103 CSSAGVYLKSDLLPHCETDTVDPKSRHK-----GKLNTESVLESKGVNWTSLRPVYIYGP 157
S++ ++ E P+S + G T + ES G++ +S P
Sbjct: 122 ASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESP 181
Query: 158 LNYNPVEEW----FFHRLKAGRPIPIP-GSGIQVTQLGHVK 193
L R+K G+ + G+ G
Sbjct: 182 LRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAG 222
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 42.9 bits (99), Expect = 8e-06
Identities = 27/194 (13%), Positives = 59/194 (30%), Gaps = 15/194 (7%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T +IG +++ + GH L R + + + F +S + G D+
Sbjct: 10 GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDH 67
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC 118
+ ++ K DVV G E + + + + S G + +
Sbjct: 68 ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEP 125
Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
+ K++ + + ++G+ +T + G + +
Sbjct: 126 AKSVFEVKAKVRRAIE------AEGIPYTYVSSNCFAGY--FLRSLAQAGLTAPPRDKVV 177
Query: 179 IPGSGIQVTQLGHV 192
I G G
Sbjct: 178 ILGDGNARVVFVKE 191
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 41.5 bits (96), Expect = 3e-05
Identities = 41/223 (18%), Positives = 62/223 (27%), Gaps = 37/223 (16%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GG FIG + V + K A G A ++ + GD D
Sbjct: 9 GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA----GNKANLEAILGDRVELVVGDIADA 64
Query: 62 DFVKSSLSAKGFDVVY-DINGREADEVEPILDALPNLEQFIYC--------------SSA 106
+ V + V Y + + +P N S+
Sbjct: 65 ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTD 124
Query: 107 GVY----LKSDLLPHC--------ETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSL 149
VY L+ DL H +P S + K ++ ++ S GV T
Sbjct: 125 EVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATIS 184
Query: 150 RPVYIYGPL-NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH 191
YGP + + AG + G G V H
Sbjct: 185 NCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIH 227
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.2 bits (95), Expect = 3e-05
Identities = 36/236 (15%), Positives = 66/236 (27%), Gaps = 51/236 (21%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GG +IG L++ G+ + + +L + I + D
Sbjct: 8 GGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK-------HHIPFYEVDL 60
Query: 59 KDYDFVKSSLSAKGFDVV------------------YDINGREADEVEPILDALPNLEQF 100
D ++ D V Y N V L N+ +F
Sbjct: 61 CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120
Query: 101 IYCSSAGVYLKS----DLLPHCETDTVDPKSRH-KGKLNTESVLES------KGVNWTSL 149
++ SSA VY + +++P E + P + + K E++L K + L
Sbjct: 121 VFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAIL 180
Query: 150 RPVYIYGPLNYNPVEEWFFHR------------LKAGRPIPIPGSGIQVTQLGHVK 193
R G + E + + I G ++
Sbjct: 181 RYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIR 236
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 39.8 bits (91), Expect = 1e-04
Identities = 21/196 (10%), Positives = 45/196 (22%), Gaps = 14/196 (7%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GGT +IG + + GH + R + + ++ D+
Sbjct: 10 GGTGYIGKRIVNASISLGHPTYVLFRPEVVSN---IDKVQMLLYFKQLGAKLIEASLDDH 66
Query: 62 DFVKSSLSAKGFDVV-----YDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLP 116
+ +L + + + S G+
Sbjct: 67 QRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD-----PD 121
Query: 117 HCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
E K +E+ + +T + G + + H +
Sbjct: 122 IMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFA-GSLAQLDGHMMPPRDK 180
Query: 177 IPIPGSGIQVTQLGHV 192
+ I G G
Sbjct: 181 VLIYGDGNVKGIWVDE 196
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 38.5 bits (88), Expect = 3e-04
Identities = 24/193 (12%), Positives = 43/193 (22%), Gaps = 14/193 (7%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
G T G L R+ GH V K IA++L + + G +
Sbjct: 10 GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQ---------GPLLN 60
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
+ + + I + + Y+ S + H
Sbjct: 61 NV---PLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY 117
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPI 179
K E+ + G+ T + P + + G
Sbjct: 118 GPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHA 177
Query: 180 PGSGIQVTQLGHV 192
P
Sbjct: 178 PFDPDIPLPWLDA 190
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 36.8 bits (84), Expect = 9e-04
Identities = 36/215 (16%), Positives = 61/215 (28%), Gaps = 26/215 (12%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G FI ++R L EGH V K + + + LK +
Sbjct: 22 GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK-VTEGV 80
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPI-------LDALPNLEQFIYCSSAG------- 107
D V + + G N + + +++F Y SSA
Sbjct: 81 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQ 140
Query: 108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGP----- 157
+ + L + +P+ KL TE + + G+ R IYGP
Sbjct: 141 LETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWK 200
Query: 158 -LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH 191
+ + + G G+Q
Sbjct: 201 GGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTF 235
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 36.4 bits (82), Expect = 0.001
Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 6/63 (9%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T F G +LS L G V ++ + E A + + GD +D
Sbjct: 15 GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF------ETARVADGMQSEIGDIRDQ 68
Query: 62 DFV 64
+ +
Sbjct: 69 NKL 71
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 36.1 bits (81), Expect = 0.002
Identities = 14/79 (17%), Positives = 22/79 (27%), Gaps = 23/79 (29%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T +G L R L G+ + L K GD +
Sbjct: 7 GKTGQVGWELQRSLAPVGNLIALDVHSK-----------------------EFCGDFSNP 43
Query: 62 DFVKSSLSAKGFDVVYDIN 80
V ++ DV+ +
Sbjct: 44 KGVAETVRKLRPDVIVNAA 62
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 35.1 bits (80), Expect = 0.003
Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GG R IG+ +R + G V + R A + +++ EF K + D +
Sbjct: 16 GGNRGIGLAFTRAVAAAGANVAVIYRSAADAVE----VTEKVGKEFGVKTKAYQCDVSNT 71
Query: 62 DFVKSSLSA 70
D V ++
Sbjct: 72 DIVTKTIQQ 80
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 35.2 bits (79), Expect = 0.004
Identities = 9/64 (14%), Positives = 20/64 (31%), Gaps = 3/64 (4%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G F+ + L++ G++V R + +A + F + + D
Sbjct: 18 GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAV---VEDMLKQ 74
Query: 62 DFVK 65
Sbjct: 75 GAYD 78
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 34.7 bits (79), Expect = 0.004
Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G +R IG ++ L K G +V + A A+++ ++ + + + GD
Sbjct: 8 GASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEV----SKQIEAYGGQAITFGGDVSKE 63
Query: 62 DFVKS 66
V++
Sbjct: 64 ADVEA 68
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 34.7 bits (78), Expect = 0.004
Identities = 28/199 (14%), Positives = 57/199 (28%), Gaps = 12/199 (6%)
Query: 2 GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
G + G L + ++++G +VTL R K ++ +QE +F + +
Sbjct: 21 GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQG 80
Query: 60 DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE 119
G E L + E L S
Sbjct: 81 HDVGFCC------LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS 134
Query: 120 TDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP- 178
++ + + + + V E K ++ RP + + EW + P
Sbjct: 135 SNFLYLQVKGE---VEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSW 191
Query: 179 IPGSGIQVTQLGHVKVRKL 197
G + V + + +
Sbjct: 192 ASGHSVPVVTVVRAMLNNV 210
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 34.7 bits (79), Expect = 0.004
Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G + +G ++ E +V + R K A + +E + + + +KGD
Sbjct: 14 GSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV----LEEIKKVGGEAIAVKGDVTVE 69
Query: 62 DFVKS 66
V +
Sbjct: 70 SDVIN 74
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 197 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.97 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.97 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.97 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.97 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.97 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.96 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.96 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.95 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.95 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.95 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.95 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.95 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.94 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.94 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.92 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.92 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.92 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.91 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.91 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.91 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.89 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.87 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.86 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.83 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.83 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.8 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.79 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.72 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.64 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.61 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.6 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.59 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.58 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.58 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.57 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.56 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.56 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.56 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.56 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.55 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.55 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.54 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.54 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.53 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.53 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.53 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.52 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.52 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.52 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.51 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.51 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.51 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.51 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.51 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.5 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.49 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.48 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.46 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.46 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.46 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.45 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.44 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.44 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.43 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.42 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.4 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.4 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.39 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.39 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.39 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.39 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.38 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.38 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.37 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.36 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.34 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.34 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.33 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.33 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.32 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.29 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.28 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.27 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.22 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.21 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.18 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.14 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.05 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.01 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.89 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 98.85 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 98.84 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.83 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.53 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.5 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.46 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.96 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.79 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.7 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.64 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.58 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.46 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.35 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.31 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.28 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.26 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.17 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.12 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.11 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.07 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.88 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.87 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 96.86 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.82 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.74 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.68 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.65 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 96.56 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.54 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 96.44 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 96.38 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.26 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.24 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 96.23 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 96.15 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.15 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 96.12 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.1 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 96.06 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.04 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 96.03 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 95.98 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 95.96 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 95.81 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 95.77 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 95.76 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 95.68 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 95.61 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 95.52 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 95.33 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 95.31 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 95.22 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 95.2 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 95.18 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 95.17 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 95.14 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 95.14 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 95.13 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 94.9 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 94.86 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 94.84 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 94.8 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 94.79 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 94.76 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 94.68 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 94.68 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 94.62 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 94.6 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 94.58 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 94.55 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 94.55 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 94.53 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 94.52 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 94.47 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 94.45 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 94.24 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 94.21 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 94.14 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 94.04 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 93.99 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 93.85 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 93.83 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 93.82 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 93.77 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 93.46 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 93.41 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 93.39 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 93.31 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 93.3 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 93.25 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 93.14 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 93.13 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 93.0 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 92.99 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 92.91 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 92.85 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 92.84 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 92.78 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 92.74 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 92.68 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 92.65 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 92.59 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 92.42 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 92.38 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 92.26 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 92.23 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 92.1 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 92.1 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 92.0 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 91.91 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 91.65 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 91.6 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 91.53 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 91.35 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 91.34 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 90.82 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 90.73 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 90.64 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 90.61 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 90.28 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 90.07 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 90.06 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 89.62 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 89.52 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 89.52 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 89.45 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 89.42 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.87 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.78 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 88.52 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 88.28 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 88.2 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 88.15 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 88.01 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 87.59 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 87.54 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 87.41 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 86.3 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 86.16 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 86.12 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 86.05 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 85.85 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 85.51 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 85.2 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 84.62 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 84.49 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 84.35 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 84.27 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 83.24 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 82.84 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 82.82 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 82.76 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 82.66 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 82.51 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 82.48 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 82.29 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 81.6 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 81.33 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 81.26 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 81.07 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 80.9 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 80.57 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 80.37 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.4e-34 Score=221.54 Aligned_cols=193 Identities=20% Similarity=0.165 Sum_probs=144.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|++.|++|++++|.....................++++++.+|+.|.+++.+++++..+|+|||+|
T Consensus 7 TGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v~h~a 86 (357)
T d1db3a_ 7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLG 86 (357)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEECC
T ss_pred eCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCEEEEee
Confidence 79999999999999999999999999965432111111111112233468999999999999999999988899999999
Q ss_pred CCC----------------ccchHHHHHhCC--C---CCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHH
Q 029198 81 GRE----------------ADEVEPILDALP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV 138 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~--~---~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~ 138 (197)
+.. +.++.+++++++ + .++||++||+.+||.+...+++|+++..|.++| .+|+.+|.+
T Consensus 87 a~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~ 166 (357)
T d1db3a_ 87 AMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWI 166 (357)
T ss_dssp CCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred cccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Confidence 863 234788999886 3 347999999999998888899999999999989 999999987
Q ss_pred Hh----hcCCcEEEEccceeeCCCCCCCh----HHHHHHHHHcCC-CcccCCCCceeEEEEEEE
Q 029198 139 LE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGR-PIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 139 ~~----~~~~~~~i~r~~~i~g~~~~~~~----~~~~~~~~~~~~-~~~~~~~g~~~~~~i~v~ 193 (197)
++ +.+++++++||+++|||+..... +..++..+..++ ....+|++++.+||+||+
T Consensus 167 ~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~ 230 (357)
T d1db3a_ 167 TVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK 230 (357)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred HHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeec
Confidence 64 46899999999999999643332 233444444554 455668999999998875
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.8e-31 Score=203.98 Aligned_cols=193 Identities=18% Similarity=0.140 Sum_probs=149.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccC-CCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
||||||||++|+++|+++||+|++++|....... .+.............+++++.+|+.|++.+..++.+.++++++|+
T Consensus 7 TG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~v~~~ 86 (347)
T d1t2aa_ 7 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNL 86 (347)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred ecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcccceeeee
Confidence 7999999999999999999999999997654221 111000111122235789999999999999999988899999999
Q ss_pred cCCC----------------ccchHHHHHhCC-----CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHH
Q 029198 80 NGRE----------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES 137 (197)
Q Consensus 80 a~~~----------------~~~~~~ll~~~~-----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~ 137 (197)
++.. +.++.+++++++ +.++||++||..+||.+...+++|+++..|.++| .+|..+|+
T Consensus 87 ~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~ 166 (347)
T d1t2aa_ 87 GAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYW 166 (347)
T ss_dssp CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred eeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 8763 234678888876 3458999999999998888899999999999999 99999999
Q ss_pred HH----hhcCCcEEEEccceeeCCCCCCChH-----HHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 138 VL----ESKGVNWTSLRPVYIYGPLNYNPVE-----EWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 138 ~~----~~~~~~~~i~r~~~i~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
++ ++.+++++++||+++|||+...... ..+........+...+++|++.++|+||+
T Consensus 167 ~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~ 231 (347)
T d1t2aa_ 167 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAK 231 (347)
T ss_dssp HHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHH
T ss_pred HHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEec
Confidence 87 4569999999999999996433322 23444555677788889999999998864
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.97 E-value=1.4e-30 Score=198.35 Aligned_cols=186 Identities=20% Similarity=0.323 Sum_probs=153.7
Q ss_pred CCcccchHHHHHHHHHHCCCe------EEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQ------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d 74 (197)
||||||||++|+++|+++|++ |+.+++........ .........+++++.+|+.+......... .+|
T Consensus 6 tG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d 78 (322)
T d1r6da_ 6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRA-----NLAPVDADPRLRFVHGDIRDAGLLARELR--GVD 78 (322)
T ss_dssp ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGG-----GGGGGTTCTTEEEEECCTTCHHHHHHHTT--TCC
T ss_pred ECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHh-----HhhhhhcCCCeEEEEeccccchhhhcccc--ccc
Confidence 799999999999999999974 45554432221110 01112234679999999999998888877 999
Q ss_pred EEEeccCCC----------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhH
Q 029198 75 VVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT 135 (197)
Q Consensus 75 ~vi~~a~~~----------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~ 135 (197)
.|+|+|+.. ..++.+++++++ ++++||++||..+||.....+++|+++..|.+.| .+|..+
T Consensus 79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~ 158 (322)
T d1r6da_ 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGS 158 (322)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHH
T ss_pred eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 999999774 235788999988 7899999999999999888899999999999999 999999
Q ss_pred HHHH----hhcCCcEEEEccceeeCCCCC-CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 136 ESVL----ESKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 136 e~~~----~~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
|.++ ++++++++++||+++|||++. ..+++.+++.+.+++++.++++|++.+||+||+
T Consensus 159 E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~ 221 (322)
T d1r6da_ 159 DLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTD 221 (322)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHH
T ss_pred HHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHH
Confidence 9876 456999999999999999854 468899999999999999999999999998875
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=8.3e-32 Score=206.75 Aligned_cols=191 Identities=21% Similarity=0.230 Sum_probs=155.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++|+++|+++||+|++++|........+..............++++.+|+.|......... .++.|+|++
T Consensus 22 TG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~~~v~~~~ 99 (341)
T d1sb8a_ 22 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQA 99 (341)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred ecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc--ccccccccc
Confidence 799999999999999999999999998543311100000000001123578999999999998888877 999999998
Q ss_pred CCC----------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh-
Q 029198 81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE- 140 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~- 140 (197)
+.. +.++.+++++++ +++++|++||..+||.....+.+|+++..|.+.| .+|..+|.+++
T Consensus 100 a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~ 179 (341)
T d1sb8a_ 100 ALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADV 179 (341)
T ss_dssp SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred ccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHH
Confidence 753 345888999998 7889999999999998888899999999999999 99999998764
Q ss_pred ---hcCCcEEEEccceeeCCCC-----CCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 141 ---SKGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 141 ---~~~~~~~i~r~~~i~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
..+++++++||+++||++. ...++.+++..+.+|+++.++++|.+.++|+||+
T Consensus 180 ~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~ 240 (341)
T d1sb8a_ 180 FSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIE 240 (341)
T ss_dssp HHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHH
T ss_pred HHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEe
Confidence 4689999999999999863 2457788899999999999999999999999875
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.97 E-value=7e-31 Score=203.09 Aligned_cols=187 Identities=19% Similarity=0.218 Sum_probs=145.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEE-EecCCCCcc-CCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~-~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
||||||+|++|+++|++.|++|++ +++...... ..+. .....++++++.+|++|++.+..++++.++|+|||
T Consensus 6 tG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~------~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih 79 (361)
T d1kewa_ 6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS------DISESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT------TTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHH------hhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence 799999999999999999997554 444322211 1111 01123689999999999999999998789999999
Q ss_pred ccCCCc----------------cchHHHHHhCC-----------CCCcEEEEecceecccCCCCC----------CCCCC
Q 029198 79 INGREA----------------DEVEPILDALP-----------NLEQFIYCSSAGVYLKSDLLP----------HCETD 121 (197)
Q Consensus 79 ~a~~~~----------------~~~~~ll~~~~-----------~~~~~v~~Ss~~vyg~~~~~~----------~~e~~ 121 (197)
+|+... .++.+++++++ ++++||++||..+||.....+ ..|..
T Consensus 80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~ 159 (361)
T d1kewa_ 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence 998642 23667888775 245899999999998653322 23445
Q ss_pred CCCCCCcc-hhhhhHHHHHh----hcCCcEEEEccceeeCCCCC-CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 122 ~~~~~~~~-~~k~~~e~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+..|.+.| .+|..+|.++. +.+++++++||+++|||++. ..+++.+++.+.+|+++.++++|++.++|+||+
T Consensus 160 ~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~ 237 (361)
T d1kewa_ 160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237 (361)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHH
Confidence 56777878 99999999874 47999999999999999754 457889999999999999999999999998864
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.9e-32 Score=206.36 Aligned_cols=180 Identities=21% Similarity=0.306 Sum_probs=137.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++|+.+|+++|++|++++|........+.. ......+.+...|+ +..++. ++|+|||+|
T Consensus 7 tG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~------~~~~~~~d~~~~~~-----~~~~~~--~~d~VihlA 73 (312)
T d2b69a1 7 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH------WIGHENFELINHDV-----VEPLYI--EVDQIYHLA 73 (312)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG------GTTCTTEEEEECCT-----TSCCCC--CCSEEEECC
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHH------hcCCCceEEEehHH-----HHHHHc--CCCEEEECc
Confidence 79999999999999999999999999854432222110 00112344444444 444555 899999999
Q ss_pred CCCc----------------cchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCC-----CCCCCCCcc-hhhhhHHH
Q 029198 81 GREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCET-----DTVDPKSRH-KGKLNTES 137 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~-----~~~~~~~~~-~~k~~~e~ 137 (197)
+... .++.+++++++ ...++|++||+.+||.....+..|+ ++..|.++| .+|..+|.
T Consensus 74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~ 153 (312)
T d2b69a1 74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAET 153 (312)
T ss_dssp SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHH
T ss_pred ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHH
Confidence 8632 24778999998 3348999999999997766565554 344667778 99999999
Q ss_pred HH----hhcCCcEEEEccceeeCCCCC---CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 138 VL----ESKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 138 ~~----~~~~~~~~i~r~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
++ ++++++++++||+++|||++. ..+++.+++.+..|+++.++++|.+.++|+|++
T Consensus 154 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~ 216 (312)
T d2b69a1 154 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVS 216 (312)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHH
T ss_pred HHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHH
Confidence 87 456999999999999999742 357888999999999999999999999998864
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=2.8e-29 Score=192.41 Aligned_cols=189 Identities=23% Similarity=0.295 Sum_probs=144.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|+++|++|++++|........+. ........+++++.+|+.|.+.+.++++..++|+|||+|
T Consensus 6 tG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlA 81 (338)
T d1udca_ 6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLP----VIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA 81 (338)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHH----HHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHH----HHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEECC
Confidence 7999999999999999999999999986544221110 000112357999999999999999999877899999999
Q ss_pred CCC----------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCC-CCCCCcc-hhhhhHHHHHh
Q 029198 81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT-VDPKSRH-KGKLNTESVLE 140 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~-~~~~~~~-~~k~~~e~~~~ 140 (197)
+.. +.++.+++++++ +++++|++||..+|+.....+..|.++ ..|...| .+|..+|.++.
T Consensus 82 a~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~ 161 (338)
T d1udca_ 82 GLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILT 161 (338)
T ss_dssp SCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHH
T ss_pred CccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHHH
Confidence 864 234788999998 899999999999998776655555554 4577777 99999998874
Q ss_pred h-----cCCcEEEEccceeeCCCCC-----------CChHHHHHHHHHcC-CCcccCC------CCceeEEEEEEE
Q 029198 141 S-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVK 193 (197)
Q Consensus 141 ~-----~~~~~~i~r~~~i~g~~~~-----------~~~~~~~~~~~~~~-~~~~~~~------~g~~~~~~i~v~ 193 (197)
+ .+++++++||+++||++.. ..+++.++..+..+ +++.++| +|.+.+||+||+
T Consensus 162 ~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~ 237 (338)
T d1udca_ 162 DLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_dssp HHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHH
T ss_pred HHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEe
Confidence 2 5799999999999998532 23556666665543 4555554 478899998863
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.96 E-value=2.2e-28 Score=185.83 Aligned_cols=188 Identities=18% Similarity=0.118 Sum_probs=146.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|+++||+|++++|........ ..+.....++++++.+|+.|.+.+.+.+....+++++|++
T Consensus 6 tG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 6 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRW-----RLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCH-----HHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHH-----HHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 79999999999999999999999999976542110 0111223467999999999999999999878899999998
Q ss_pred CCC----------------ccchHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh
Q 029198 81 GRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE 140 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~ 140 (197)
+.. ..++.+++++++ + .++|++.||..+|+.....+.+|+++..|.++| .+|..+|.++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 160 (321)
T d1rpna_ 81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV 160 (321)
T ss_dssp SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence 763 234778899888 4 457888888889998888888999999999999 99999999864
Q ss_pred ----hcCCcEEEEccceeeCCCCCCCh----HHHHHHHHHc-CCCcccCCCCceeEEEEEEE
Q 029198 141 ----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKA-GRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 141 ----~~~~~~~i~r~~~i~g~~~~~~~----~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v~ 193 (197)
..+++++++||+++|||...... +..++..+.. +++...+++|++.++|+||+
T Consensus 161 ~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~ 222 (321)
T d1rpna_ 161 NYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAG 222 (321)
T ss_dssp HHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHH
T ss_pred HHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeH
Confidence 47899999999999999643222 2233344444 44555678999999998864
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.95 E-value=7.7e-28 Score=184.05 Aligned_cols=192 Identities=15% Similarity=0.081 Sum_probs=139.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
||||||||++|+++|+++||+|++++|..+................ ....+.++.+|+.+.+.+...++..++|+|||+
T Consensus 7 TGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D~Vih~ 86 (339)
T d1n7ha_ 7 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNL 86 (339)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred eCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccchhhhc
Confidence 7999999999999999999999999997543221111111111111 124688999999999999999987799999999
Q ss_pred cCCCc----------------cchHHHHHhCC-------CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhH
Q 029198 80 NGREA----------------DEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT 135 (197)
Q Consensus 80 a~~~~----------------~~~~~ll~~~~-------~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~ 135 (197)
|+... .++.+++++++ ...++++.||..+|+... .+.+|+++..|.+.| .+|..+
T Consensus 87 Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~-~~~~E~~~~~p~~~Y~~sK~~~ 165 (339)
T d1n7ha_ 87 AAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-PPQSETTPFHPRSPYAASKCAA 165 (339)
T ss_dssp CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-SSBCTTSCCCCCSHHHHHHHHH
T ss_pred cccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC-CCCCCCCCCCCcchhhHHHHHH
Confidence 98742 22555666664 234677788777776554 468899999999988 999999
Q ss_pred HHHH----hhcCCcEEEEccceeeCCCCCCChH-HH----HHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 136 ESVL----ESKGVNWTSLRPVYIYGPLNYNPVE-EW----FFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 136 e~~~----~~~~~~~~i~r~~~i~g~~~~~~~~-~~----~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
|.++ +.++++++++||+++|||+...... .. +........+..++|++.+.+||+|++
T Consensus 166 E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~ 232 (339)
T d1n7ha_ 166 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAG 232 (339)
T ss_dssp HHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHH
T ss_pred HHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeee
Confidence 9876 4579999999999999997443332 22 222333445556678899999998874
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=1.2e-28 Score=189.38 Aligned_cols=188 Identities=18% Similarity=0.204 Sum_probs=138.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|+++|++|+++++.......... ........+++++.+|+.|.+.+..++...++|+|||+|
T Consensus 7 TGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~----~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlA 82 (347)
T d1z45a2 7 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVA----RLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFA 82 (347)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHH----HHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred eCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHH----hHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEcc
Confidence 7999999999999999999999999875443211000 001112357999999999999999999888999999999
Q ss_pred CCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCC----CCCCCCCCCCCCCCcc-hhhhhHHH
Q 029198 81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD----LLPHCETDTVDPKSRH-KGKLNTES 137 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~----~~~~~e~~~~~~~~~~-~~k~~~e~ 137 (197)
+... .++.+++++++ +++++|++||+.+||... ..+..|+.+..|.+.| .+|..+|+
T Consensus 83 a~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 162 (347)
T d1z45a2 83 GLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIEN 162 (347)
T ss_dssp SCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred ccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHH
Confidence 8742 24678899988 889999999999998543 3557778888888888 99999998
Q ss_pred HHhh------cCCcEEEEccceeeCCCC-----------CCChHHHHHHHHH-cCCCcccCCCCceeEEEEEE
Q 029198 138 VLES------KGVNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHV 192 (197)
Q Consensus 138 ~~~~------~~~~~~i~r~~~i~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~v 192 (197)
++.. .+++++++||+++||+.. ...+++.+...+. +++++.++|++.+.++++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~ 235 (347)
T d1z45a2 163 ILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPI 235 (347)
T ss_dssp HHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCE
T ss_pred HHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCcee
Confidence 7642 578999999999998642 1234555555543 45677788877766665444
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.95 E-value=4.4e-28 Score=186.20 Aligned_cols=186 Identities=19% Similarity=0.188 Sum_probs=144.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhh-hhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
||||||||++|+++|++.|++|.++.++........ ... .....+++++.+|+.|.+.+..++. .+|.|+|+
T Consensus 8 TGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~-----~~~~~~~~~~i~~~~~Di~d~~~~~~~~~--~~~~v~~~ 80 (346)
T d1oc2a_ 8 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK-----ANLEAILGDRVELVVGDIADAELVDKLAA--KADAIVHY 80 (346)
T ss_dssp ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG-----GGTGGGCSSSEEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred eCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccH-----HHHHHhhcCCeEEEEccCCCHHHHHHHHh--hhhhhhhh
Confidence 799999999999999999987655554321110000 000 1113589999999999999999998 89999999
Q ss_pred cCCC----------------ccchHHHHHhCC-CCCcEEEEecceecccC------------CCCCCCCCCCCCCCCcc-
Q 029198 80 NGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKS------------DLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 80 a~~~----------------~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~------------~~~~~~e~~~~~~~~~~- 129 (197)
|+.. ..++.+++++++ ...++|++||..+||.. ......|+++..|.+.|
T Consensus 81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~ 160 (346)
T d1oc2a_ 81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS 160 (346)
T ss_dssp CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred hhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence 8864 235788888888 44689999999999842 12345567777888888
Q ss_pred hhhhhHHHHHh----hcCCcEEEEccceeeCCCC-CCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 130 ~~k~~~e~~~~----~~~~~~~i~r~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+|..+|.+++ ..+++++++||+++|||+. ....+..++..+..++++.++++|++.++|+|++
T Consensus 161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~ 229 (346)
T d1oc2a_ 161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTN 229 (346)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchh
Confidence 99999998774 5689999999999999974 3456777888888999899999999999998875
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.95 E-value=2e-27 Score=183.52 Aligned_cols=180 Identities=20% Similarity=0.234 Sum_probs=141.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|+++||+|+++++.+....... .....+..+|+.+.+.+.++++ ++|.|||+|
T Consensus 21 TGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~--~~d~Vih~a 87 (363)
T d2c5aa1 21 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----------MFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA 87 (363)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----------GTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhh-----------cccCcEEEeechhHHHHHHHhh--cCCeEeecc
Confidence 799999999999999999999999998765522111 2456788899999999999888 999999999
Q ss_pred CCCc-----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCC-------CCCCCCCCCcc-hhhh
Q 029198 81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC-------ETDTVDPKSRH-KGKL 133 (197)
Q Consensus 81 ~~~~-----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~-------e~~~~~~~~~~-~~k~ 133 (197)
+... .++.+++++++ ++++||++||..+|+.....+.. |..+..|.+.| .+|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~ 167 (363)
T d2c5aa1 88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL 167 (363)
T ss_dssp CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred cccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHH
Confidence 7642 23677888887 88999999999999965443333 33455777888 9999
Q ss_pred hHHHHHh----hcCCcEEEEccceeeCCCCC-----CC-hHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 134 NTESVLE----SKGVNWTSLRPVYIYGPLNY-----NP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 134 ~~e~~~~----~~~~~~~i~r~~~i~g~~~~-----~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+|.+++ ..+++++++||+++||+++. .. .............+...+++|.+.++|+|++
T Consensus 168 ~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~ 237 (363)
T d2c5aa1 168 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFID 237 (363)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHH
T ss_pred HHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehh
Confidence 9998764 46999999999999998642 11 2233445556677778889999999999864
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.95 E-value=1.1e-27 Score=186.78 Aligned_cols=192 Identities=18% Similarity=0.198 Sum_probs=141.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCC-------ccCCCCCCCch----hhh-hccCceEEEeecCCCHHHHHhhh
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-------IAQQLPGESDQ----EFA-EFSSKILHLKGDRKDYDFVKSSL 68 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~-------~~~~~~~~~~~----~~~-~~~~~~~~~~~d~~~~~~l~~~~ 68 (197)
||||||||++|+++|++.||+|++++.-... ........... .+. ....+++++.+|+.|.+.+.+++
T Consensus 7 TGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~ 86 (393)
T d1i24a_ 7 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF 86 (393)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHHHHHH
Confidence 7999999999999999999999999731100 00000000000 011 12357999999999999999999
Q ss_pred hccCccEEEeccCCC-------------------ccchHHHHHhCC--CC-CcEEEEecceecccCCCCCCCC-------
Q 029198 69 SAKGFDVVYDINGRE-------------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCE------- 119 (197)
Q Consensus 69 ~~~~~d~vi~~a~~~-------------------~~~~~~ll~~~~--~~-~~~v~~Ss~~vyg~~~~~~~~e------- 119 (197)
++.++|+|||+|+.. +.++.+++++++ +. +++++.||..+|+.... +..|
T Consensus 87 ~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~~~~~~~~ 165 (393)
T d1i24a_ 87 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEEGYITITH 165 (393)
T ss_dssp HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBCSSEEEEEE
T ss_pred HhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-ccccccccccc
Confidence 988899999999853 234778999888 44 56778888888874332 1111
Q ss_pred -------CCCCCCCCcc-hhhhhHHHHH----hhcCCcEEEEccceeeCCCCC------------------CChHHHHHH
Q 029198 120 -------TDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY------------------NPVEEWFFH 169 (197)
Q Consensus 120 -------~~~~~~~~~~-~~k~~~e~~~----~~~~~~~~i~r~~~i~g~~~~------------------~~~~~~~~~ 169 (197)
..+..|.++| .+|..+|.++ ++.+++++++||+++|||+.. ..++..++.
T Consensus 166 ~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 245 (393)
T d1i24a_ 166 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCV 245 (393)
T ss_dssp TTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHH
T ss_pred cccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchhhhhH
Confidence 1234566778 9999999876 467999999999999998631 234677888
Q ss_pred HHHcCCCcccCCCCceeEEEEEEE
Q 029198 170 RLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 170 ~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+..++++.++|++.+.+||+||+
T Consensus 246 ~~~~~~~~~i~g~~~~~rd~v~v~ 269 (393)
T d1i24a_ 246 QAAVGHPLTVYGKGGQTRGYLDIR 269 (393)
T ss_dssp HHHHTCCEEEETTSCCEEEEEEHH
T ss_pred HhhcCCeeEEeeeccccccccccc
Confidence 889999999999999999998874
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=1.1e-27 Score=181.58 Aligned_cols=168 Identities=18% Similarity=0.264 Sum_probs=133.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|+++|+.|+++++..+ .|+.|.+.+.++++...+|.|+|++
T Consensus 8 TG~tGfiG~~l~~~L~~~g~~vi~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~d~v~~~a 62 (315)
T d1e6ua_ 8 AGHRGMVGSAIRRQLEQRGDVELVLRTRDE-------------------------LNLLDSRAVHDFFASERIDQVYLAA 62 (315)
T ss_dssp ETTTSHHHHHHHHHHTTCTTEEEECCCTTT-------------------------CCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EcCCcHHHHHHHHHHHHCcCEEEEecCchh-------------------------ccccCHHHHHHHHhhcCCCEEEEcc
Confidence 799999999999999999999887654321 4788999999998877899999998
Q ss_pred CCC-----------------ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCC-----CCCcc-hhhhhH
Q 029198 81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-----PKSRH-KGKLNT 135 (197)
Q Consensus 81 ~~~-----------------~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~-----~~~~~-~~k~~~ 135 (197)
+.. +.++.+++++++ ++++|||+||+.+||.....+.+|+.+.. +.+.| .+|..+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~ 142 (315)
T d1e6ua_ 63 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG 142 (315)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred hhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHH
Confidence 653 234778899987 88999999999999987777777765432 22347 999999
Q ss_pred HHHHh----hcCCcEEEEccceeeCCCCC-----CChHHH-----HHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 136 ESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEW-----FFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 136 e~~~~----~~~~~~~i~r~~~i~g~~~~-----~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
|+++. +.+++++++||+++|||++. ..+... .......+.++.++++|.+.++|+|++
T Consensus 143 E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~ 214 (315)
T d1e6ua_ 143 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVD 214 (315)
T ss_dssp HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHH
T ss_pred HHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEee
Confidence 99874 56999999999999999642 222222 344556788888999999999998864
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=7e-27 Score=179.03 Aligned_cols=181 Identities=21% Similarity=0.225 Sum_probs=141.9
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHh-hhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~-~~~~~~~d~vi~ 78 (197)
||||||||++|+++|+++| ++|+++++..+....... .++++++.+|+.+.+++.+ +++ ++|+|||
T Consensus 6 TG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~----------~~~~~~i~~Di~~~~~~~~~~~~--~~d~Vih 73 (342)
T d2blla1 6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP 73 (342)
T ss_dssp ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc----------CCCeEEEECccCChHHHHHHHHh--CCCcccc
Confidence 7999999999999999999 599999987655332222 3689999999998766655 555 8999999
Q ss_pred ccCCC----------------ccchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCC-------CCCCCcc-hhhh
Q 029198 79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDT-------VDPKSRH-KGKL 133 (197)
Q Consensus 79 ~a~~~----------------~~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~-------~~~~~~~-~~k~ 133 (197)
+|+.. +.++.++++++. ...+++++||..+|+........|..+ ..|...| .+|.
T Consensus 74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~ 153 (342)
T d2blla1 74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ 153 (342)
T ss_dssp CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred ccccccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhccc
Confidence 99874 234788999988 556778999999999765544444322 2344557 8999
Q ss_pred hHHHHHh----hcCCcEEEEccceeeCCCCC---------CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 134 ~~e~~~~----~~~~~~~i~r~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
.+|+++. ..+++++++||+.+||+... ......++..+++|+++.++++|++.++|+||+
T Consensus 154 ~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~ 226 (342)
T d2blla1 154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIR 226 (342)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHH
T ss_pred chhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccc
Confidence 9999874 46899999999999998521 224667888899999999999999999998875
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.1e-24 Score=166.91 Aligned_cols=193 Identities=18% Similarity=0.164 Sum_probs=140.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCc-hhh-hhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-QEF-AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
||||||||++|+++|+++||+|+++++.............. ... .....++.++.+|+.|.+.+.+++....+++++|
T Consensus 8 TG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~~~i~h 87 (346)
T d1ek6a_ 8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIH 87 (346)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEE
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccccccccc
Confidence 79999999999999999999999998754442222111000 111 1124679999999999999999998888999999
Q ss_pred ccCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCC-CCCCCCcc-hhhhhHHHH
Q 029198 79 INGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-TVDPKSRH-KGKLNTESV 138 (197)
Q Consensus 79 ~a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~-~~~~~~~~-~~k~~~e~~ 138 (197)
+|+... .++.+++++++ ++++|+++||..+|+........+.. ...+.++| .+|..+|..
T Consensus 88 ~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~ 167 (346)
T d1ek6a_ 88 FAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM 167 (346)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred cccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHHHHHHHH
Confidence 998742 34778899988 88999999999999976554433333 34566677 899999987
Q ss_pred Hhh-----cCCcEEEEccceeeCCCCC-----------CChHHHHHHHHH-cCCCcccC------CCCceeEEEEEEE
Q 029198 139 LES-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLK-AGRPIPIP------GSGIQVTQLGHVK 193 (197)
Q Consensus 139 ~~~-----~~~~~~i~r~~~i~g~~~~-----------~~~~~~~~~~~~-~~~~~~~~------~~g~~~~~~i~v~ 193 (197)
+.+ .+++++++||+++||+... ..+++.++..+. +++++.++ .+|.+.+||+|++
T Consensus 168 ~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~ 245 (346)
T d1ek6a_ 168 IRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVV 245 (346)
T ss_dssp HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH
T ss_pred HHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEE
Confidence 642 5899999999999998521 234555555443 44554443 4578889998865
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.92 E-value=5.6e-25 Score=167.63 Aligned_cols=188 Identities=20% Similarity=0.288 Sum_probs=134.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|+++||+|+++++-....... ........++++++.+|+.|.+.+.+++++.++|+|||+|
T Consensus 6 TGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~-----~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a 80 (338)
T d1orra_ 6 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATD-----NLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 80 (338)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHH-----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchh-----HHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence 79999999999999999999999998643331100 0111222468999999999999999999877899999999
Q ss_pred CCC----------------ccchHHHHHhCC--CCCcEEEEeccee-cccCCCCC----------------CCCCCCCCC
Q 029198 81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGV-YLKSDLLP----------------HCETDTVDP 125 (197)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~--~~~~~v~~Ss~~v-yg~~~~~~----------------~~e~~~~~~ 125 (197)
+.. +.++.++++++. +++++++.||..+ ++.....+ ..+..+..|
T Consensus 81 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T d1orra_ 81 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF 160 (338)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred ccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcccc
Confidence 874 335788999888 6766666666554 44332211 122233345
Q ss_pred CCcc-hhhhhHHHHH----hhcCCcEEEEccceeeCCCCC----CChHHHHHHHHH-----cCCCcccCCCCceeEEEEE
Q 029198 126 KSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY----NPVEEWFFHRLK-----AGRPIPIPGSGIQVTQLGH 191 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~----~~~~~~~~i~r~~~i~g~~~~----~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~i~ 191 (197)
.+.| .+|...|.+. +..+....++|++++|++... ...+..++..+. .++++.++|+|.+.++|+|
T Consensus 161 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~ 240 (338)
T d1orra_ 161 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 240 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeec
Confidence 5556 7788888764 457899999999999986532 234455555443 3778999999999999988
Q ss_pred EE
Q 029198 192 VK 193 (197)
Q Consensus 192 v~ 193 (197)
|+
T Consensus 241 v~ 242 (338)
T d1orra_ 241 AE 242 (338)
T ss_dssp HH
T ss_pred cc
Confidence 64
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.92 E-value=4.9e-24 Score=165.49 Aligned_cols=159 Identities=20% Similarity=0.258 Sum_probs=120.0
Q ss_pred CCcccchHHHHHHHHHH-CCCeEEEEecCCCCccCCCCCCCch------------hhhhccCceEEEeecCCCHHHHHhh
Q 029198 1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQ------------EFAEFSSKILHLKGDRKDYDFVKSS 67 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~d~~~~~~l~~~ 67 (197)
||||||||++|+++|++ .||+|+++++-.............. ........+.++.+|+.|.+.+.++
T Consensus 8 TG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~ 87 (383)
T d1gy8a_ 8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGV 87 (383)
T ss_dssp ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHH
T ss_pred eCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHHhhhh
Confidence 79999999999999996 6899999986322211110000000 0011234688999999999999999
Q ss_pred hhcc-CccEEEeccCCCc----------------cchHHHHHhCC--CCCcEEEEecceecccCC-------CCCCCCCC
Q 029198 68 LSAK-GFDVVYDINGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD-------LLPHCETD 121 (197)
Q Consensus 68 ~~~~-~~d~vi~~a~~~~----------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~-------~~~~~e~~ 121 (197)
++.. ++|+|||+|+... .++.+++++++ ++++++++||..+|+... ..+..|+.
T Consensus 88 ~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~ 167 (383)
T d1gy8a_ 88 FTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA 167 (383)
T ss_dssp HHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTS
T ss_pred hhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccccccccc
Confidence 8754 5799999998742 24777888888 789999999999887542 34566777
Q ss_pred CCCCCCcc-hhhhhHHHHHh----hcCCcEEEEccceeeCCCC
Q 029198 122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLN 159 (197)
Q Consensus 122 ~~~~~~~~-~~k~~~e~~~~----~~~~~~~i~r~~~i~g~~~ 159 (197)
+..|.+.| .+|...|.+++ .++++++++||+++|||++
T Consensus 168 ~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~ 210 (383)
T d1gy8a_ 168 KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHE 210 (383)
T ss_dssp CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCT
T ss_pred CCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCc
Confidence 78888888 99999999874 4799999999999999974
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.6e-24 Score=154.72 Aligned_cols=137 Identities=19% Similarity=0.287 Sum_probs=113.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||||++|++++++|+++||+|++++|++++..... ..+++++.+|+.|.+++.++++ ++|+|||++
T Consensus 9 ~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-----------~~~~~~~~gD~~d~~~l~~al~--~~d~vi~~~ 75 (205)
T d1hdoa_ 9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-----------PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLL 75 (205)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-----------CCCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-----------ccccccccccccchhhHHHHhc--CCCEEEEEe
Confidence 699999999999999999999999999877643322 2578999999999999999999 899999998
Q ss_pred CCCc---------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC-cchhhhhHHHHHhhcCCcEEE
Q 029198 81 GREA---------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTS 148 (197)
Q Consensus 81 ~~~~---------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~-~~~~k~~~e~~~~~~~~~~~i 148 (197)
+... ..+++++++++ +++|||++||.+++++....+ .... ++..|..+|+++++.+++|++
T Consensus 76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~-------~~~~~~~~~~~~~e~~l~~~~~~~ti 148 (205)
T d1hdoa_ 76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-------PRLQAVTDDHIRMHKVLRESGLKYVA 148 (205)
T ss_dssp CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-------GGGHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcccc-------ccccccchHHHHHHHHHHhcCCceEE
Confidence 7642 23678999998 899999999998876543311 1112 247889999999999999999
Q ss_pred EccceeeCC
Q 029198 149 LRPVYIYGP 157 (197)
Q Consensus 149 ~r~~~i~g~ 157 (197)
+||+++++.
T Consensus 149 irp~~~~~~ 157 (205)
T d1hdoa_ 149 VMPPHIGDQ 157 (205)
T ss_dssp ECCSEEECC
T ss_pred EecceecCC
Confidence 999999864
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.91 E-value=5.8e-24 Score=163.30 Aligned_cols=186 Identities=17% Similarity=0.194 Sum_probs=140.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|+++||+|++++|+..+....+ ......+.++++.+|+.|++.+.++++...+|+|+|++
T Consensus 14 TG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~------~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~a 87 (356)
T d1rkxa_ 14 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF------ETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA 87 (356)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHH------HHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHH------hhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhh
Confidence 799999999999999999999999999877643211 11112357999999999999999999888999999999
Q ss_pred CCCc----------------cchHHHHHhCC--CC-CcEEEEecceeccc-CCCCCCCCCCCCCCCCcc-hhhhhHHHHH
Q 029198 81 GREA----------------DEVEPILDALP--NL-EQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVL 139 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~--~~-~~~v~~Ss~~vyg~-~~~~~~~e~~~~~~~~~~-~~k~~~e~~~ 139 (197)
+... .++.+++++++ +. ..+++.|+..++.. ....+..|+.+..|.++| .+|...|..+
T Consensus 88 a~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~ 167 (356)
T d1rkxa_ 88 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT 167 (356)
T ss_dssp SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred ccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhhh
Confidence 8742 24778898887 44 44555554444443 334456666667788887 8888888654
Q ss_pred h-------------hcCCcEEEEccceeeCCCCC--CChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 140 E-------------SKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 140 ~-------------~~~~~~~i~r~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+ ..++.++++||+++|||++. ..++..+++.+..+.++ +++.+.+.++++||+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~v~ 235 (356)
T d1rkxa_ 168 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPV-IIRNPHAIRPWQHVL 235 (356)
T ss_dssp HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCE-ECSCTTCEECCEETH
T ss_pred hHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCce-EEeeccccccccccc
Confidence 2 35789999999999999853 45777788887766655 567888999998764
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.91 E-value=1.4e-24 Score=161.54 Aligned_cols=163 Identities=18% Similarity=0.134 Sum_probs=137.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||+|++|+++|.++||+|++++|++ +|+.|.+++.+++++.++|+|||++
T Consensus 7 tGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------------~D~~d~~~~~~~l~~~~~d~vih~a 60 (281)
T d1vl0a_ 7 TGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------------LDITNVLAVNKFFNEKKPNVVINCA 60 (281)
T ss_dssp ESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------------CCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------------ccCCCHHHHHHHHHHcCCCEEEeec
Confidence 79999999999999999999999998842 3788999999999888999999999
Q ss_pred CCCcc----------------chHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhc
Q 029198 81 GREAD----------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (197)
Q Consensus 81 ~~~~~----------------~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~ 142 (197)
+.... ....+.+.+. ...++++.||..+|+.....+..|.+++.|...| .+|...|.++++.
T Consensus 61 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~ 140 (281)
T d1vl0a_ 61 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL 140 (281)
T ss_dssp CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchhhcccccccccccccccccccccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHh
Confidence 87532 1233444444 5678889999999998888889999998888888 9999999999999
Q ss_pred CCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+.+++++||+++||++ .++...++..+..++++.+++ ++.++|+|++
T Consensus 141 ~~~~~i~R~~~vyG~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~ 187 (281)
T d1vl0a_ 141 NPKYYIVRTAWLYGDG--NNFVKTMINLGKTHDELKVVH--DQVGTPTSTV 187 (281)
T ss_dssp CSSEEEEEECSEESSS--SCHHHHHHHHHHHCSEEEEES--SCEECCEEHH
T ss_pred CCCccccceeEEeCCC--cccccchhhhhccCCceeecC--Cceeccchhh
Confidence 9999999999999995 467778888888888877765 5788998765
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=5.8e-23 Score=149.18 Aligned_cols=148 Identities=20% Similarity=0.220 Sum_probs=117.5
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
||||||+|++++++|+++|+ +|++++|++...... ....+.+..+|+.+.+.+..+++ ++|+|||
T Consensus 20 tGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~-----------~~~~i~~~~~D~~~~~~~~~~~~--~~d~vi~ 86 (232)
T d2bkaa1 20 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-----------AYKNVNQEVVDFEKLDDYASAFQ--GHDVGFC 86 (232)
T ss_dssp ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-----------GGGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred ECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc-----------ccceeeeeeeccccccccccccc--ccccccc
Confidence 79999999999999999994 899999987553221 12578888899999999999998 8999999
Q ss_pred ccCCCc-------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhc
Q 029198 79 INGREA-------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (197)
Q Consensus 79 ~a~~~~-------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~ 142 (197)
+++... ..+.+++++++ ++++||++||.++++. +.+.| .+|+.+|+.+++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~-------------~~~~Y~~~K~~~E~~l~~~ 153 (232)
T d2bkaa1 87 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGEVEAKVEEL 153 (232)
T ss_dssp CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHHTT
T ss_pred cccccccccchhhhhhhcccccceeeecccccCccccccCCccccccC-------------ccchhHHHHHHhhhccccc
Confidence 998742 23677888887 8899999999887532 23456 9999999999998
Q ss_pred CCc-EEEEccceeeCCCCCCChHHHHHHHHHcC
Q 029198 143 GVN-WTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174 (197)
Q Consensus 143 ~~~-~~i~r~~~i~g~~~~~~~~~~~~~~~~~~ 174 (197)
+++ ++|+||+.+||++...+...++...+...
T Consensus 154 ~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~ 186 (232)
T d2bkaa1 154 KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGS 186 (232)
T ss_dssp CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCS
T ss_pred cccceEEecCceeecCCCcCcHHHHHHHHHhhc
Confidence 885 99999999999975555555555555443
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.87 E-value=1e-23 Score=161.43 Aligned_cols=186 Identities=15% Similarity=0.075 Sum_probs=128.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|+++|++|++++|+..+...... .............+.+|+.|.+.+.+++. ++|.|+|++
T Consensus 17 TG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~~~v~~~a 91 (342)
T d1y1pa1 17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQK---RWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAHIA 91 (342)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---HHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHH---hhhccccccccEEEeccccchhhhhhhcc--cchhhhhhc
Confidence 7999999999999999999999999997544211100 00001111234567789999999999998 999999998
Q ss_pred CCC-------------ccchHHHHHhCC---CCCcEEEEecceeccc-C--C-CCCC----------------CCCCCCC
Q 029198 81 GRE-------------ADEVEPILDALP---NLEQFIYCSSAGVYLK-S--D-LLPH----------------CETDTVD 124 (197)
Q Consensus 81 ~~~-------------~~~~~~ll~~~~---~~~~~v~~Ss~~vyg~-~--~-~~~~----------------~e~~~~~ 124 (197)
+.. +.++.++++++. ++++||++||+.+++. . . .... .|..+..
T Consensus 92 ~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~ 171 (342)
T d1y1pa1 92 SVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQK 171 (342)
T ss_dssp CCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTH
T ss_pred ccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCC
Confidence 873 235788898875 6899999999765331 1 1 1111 2223333
Q ss_pred CCCcc-hhhhhHHHHH----hhc--CCcEEEEccceeeCCCC----CCChHHHHHHHHHcCCCcccCCCCceeEEEEEE
Q 029198 125 PKSRH-KGKLNTESVL----ESK--GVNWTSLRPVYIYGPLN----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~----~~~--~~~~~i~r~~~i~g~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 192 (197)
|...| .+|..+|.++ +++ +++++++||+.+|||.. .......++..+..++..... .+.+.++|+||
T Consensus 172 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~v 249 (342)
T d1y1pa1 172 SLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVSA 249 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEEH
T ss_pred CcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc-CCccceeeeeH
Confidence 44557 9999999854 333 57889999999999852 234566778888888765544 34566787665
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.86 E-value=9.2e-22 Score=147.06 Aligned_cols=166 Identities=20% Similarity=0.199 Sum_probs=131.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
||||||||++|+++|.+.|+ ++.++++... +.+|+.|.+.+.+++++.++|+|||+|
T Consensus 6 tG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~----------------------~~~Dl~~~~~~~~~i~~~~~D~Vih~A 62 (298)
T d1n2sa_ 6 FGKTGQVGWELQRSLAPVGN-LIALDVHSKE----------------------FCGDFSNPKGVAETVRKLRPDVIVNAA 62 (298)
T ss_dssp ECTTSHHHHHHHHHTTTTSE-EEEECTTCSS----------------------SCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHhCCC-EEEEECCCcc----------------------ccCcCCCHHHHHHHHHHcCCCEEEEec
Confidence 79999999999999999887 4555554332 236899999999999878899999999
Q ss_pred CCCc----------------cchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhc
Q 029198 81 GREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (197)
Q Consensus 81 ~~~~----------------~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~ 142 (197)
|... ..+.+++++++ ...+++++||..+|+.....+++|++++.|.+.| .+|..+|.++...
T Consensus 63 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~ 142 (298)
T d1n2sa_ 63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDN 142 (298)
T ss_dssp CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhh
Confidence 8642 23677888888 5678999999999998888899999999998888 9999999999887
Q ss_pred CCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEE
Q 029198 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (197)
Q Consensus 143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 192 (197)
.....++|++..++... ......+...+..+..+...+ .+.++++|+
T Consensus 143 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 189 (298)
T d1n2sa_ 143 CPKHLIFRTSWVYAGKG-NNFAKTMLRLAKERQTLSVIN--DQYGAPTGA 189 (298)
T ss_dssp CSSEEEEEECSEECSSS-CCHHHHHHHHHHHCSEEEEEC--SCEECCEEH
T ss_pred hcccccccccceeeccC-Cccchhhhhhhcccceeeccc--ceeeccccc
Confidence 77888888888776532 345556667777777666543 567788776
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.83 E-value=6.9e-22 Score=148.57 Aligned_cols=180 Identities=16% Similarity=0.094 Sum_probs=129.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhh-hhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
||||||+|++++++|+++||+|++++|++....... ...+ .....+++++.+|+.|.+.+.+++. +++.++++
T Consensus 9 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~--~~~~~~~~ 82 (312)
T d1qyda_ 9 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK----VQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVISA 82 (312)
T ss_dssp ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH----HHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhH----HHHHhhhccCCcEEEEeecccchhhhhhcc--Ccchhhhh
Confidence 799999999999999999999999999765522100 0001 1113579999999999999999998 89999998
Q ss_pred cCCC-----ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhcCCcEEEEcc
Q 029198 80 NGRE-----ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRP 151 (197)
Q Consensus 80 a~~~-----~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~~i~r~ 151 (197)
++.. .....++++++. +..++++.||.+++..... .+..+...+ ..+..++.+.++.+++++++||
T Consensus 83 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~ 156 (312)
T d1qyda_ 83 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIME------HALQPGSITFIDKRKVRRAIEAASIPYTYVSS 156 (312)
T ss_dssp CCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCC------CCCSSTTHHHHHHHHHHHHHHHTTCCBCEEEC
T ss_pred hhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcc------cccchhhhhhHHHHHHHHhhcccccceEEecc
Confidence 7653 345677777776 6778888888766543222 222233334 7788888888999999999999
Q ss_pred ceeeCCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
+.+||+... .+...+......++.+.++++|++.++|+|++
T Consensus 157 ~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 197 (312)
T d1qyda_ 157 NMFAGYFAG-SLAQLDGHMMPPRDKVLIYGDGNVKGIWVDED 197 (312)
T ss_dssp CEEHHHHTT-TSSCTTCCSSCCSSEECCBTTSCSEEEEECHH
T ss_pred ceeecCCcc-chhhHHHHhhhcccccccccccccccceeeHH
Confidence 999996421 11111122234566778889999999997764
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=7.9e-21 Score=142.38 Aligned_cols=180 Identities=16% Similarity=0.145 Sum_probs=115.0
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHH-hhh---hccCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK-SSL---SAKGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~-~~~---~~~~~d~ 75 (197)
||||||+|++|+++|+++|+ +|+++++-...... ..+ ......|+.+.+.+. ... ....++.
T Consensus 5 TGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (307)
T d1eq2a_ 5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------VNL------VDLNIADYMDKEDFLIQIMAGEEFGDVEA 71 (307)
T ss_dssp ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-------HHH------HTSCCSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred ecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-------hcc------cccchhhhccchHHHHHHhhhhcccchhh
Confidence 79999999999999999995 79998754332110 000 111112223322222 222 1237899
Q ss_pred EEeccCCCc--------------cchHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHH
Q 029198 76 VYDINGREA--------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL 139 (197)
Q Consensus 76 vi~~a~~~~--------------~~~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~ 139 (197)
|+|+|+... ..+.+++++++ ...++++.||..+++........++.+..|.+.| .+|..+|.++
T Consensus 72 i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~ 151 (307)
T d1eq2a_ 72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV 151 (307)
T ss_dssp EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhc
Confidence 999987532 23566777777 4446888888888776666566666677778888 9999999876
Q ss_pred h----hcCCcEEEEccceeeCCCCC-----CChHHHHHHHHHcCCCccc-CCCCceeEEEEEEE
Q 029198 140 E----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPI-PGSGIQVTQLGHVK 193 (197)
Q Consensus 140 ~----~~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~i~v~ 193 (197)
+ +.+++++++||+++|||... ..+...+.+.+..++...+ .|++.+.++|+|++
T Consensus 152 ~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~ 215 (307)
T d1eq2a_ 152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVG 215 (307)
T ss_dssp HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHH
T ss_pred cccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecc
Confidence 4 57899999999999999642 3445667778877765544 47778889998864
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.80 E-value=4.7e-21 Score=143.25 Aligned_cols=179 Identities=17% Similarity=0.180 Sum_probs=128.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhh-hhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
||||||+|++++++|+++||+|++++|++........ ...+ .....+++++.+|+.+.+.+.+.++ +++.++|+
T Consensus 9 tGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~vi~~ 83 (307)
T d1qyca_ 9 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEK---AQLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVIST 83 (307)
T ss_dssp ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHH---HHHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEEEC
T ss_pred ECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhH---HHHHHhhccCCcEEEEeecccchhhhhhhh--hceeeeec
Confidence 7999999999999999999999999998665321100 0001 1113568999999999999999998 89999999
Q ss_pred cCCC-ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhhcCCcEEEEccceee
Q 029198 80 NGRE-ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIY 155 (197)
Q Consensus 80 a~~~-~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~~i~r~~~i~ 155 (197)
++.. .....++++++. +.+++++.|+....... .....+...+ ..+...+.++++.+++++++||+++|
T Consensus 84 ~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~ 156 (307)
T d1qyca_ 84 VGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDN-------VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFA 156 (307)
T ss_dssp CCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTS-------CCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEH
T ss_pred ccccccchhhHHHHHHHHhccccceeeecccccccc-------ccccccccccccccccccchhhccCCCceecccceec
Confidence 8754 345678888877 78888888875543221 1111122223 66777888888999999999999999
Q ss_pred CCCCCCChHHHHHHHHHcCCCcccCCCCceeEEEEEEE
Q 029198 156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (197)
Q Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 193 (197)
|+... .+..+.....+++...+++++++.++|+|++
T Consensus 157 g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 192 (307)
T d1qyca_ 157 GYFLR--SLAQAGLTAPPRDKVVILGDGNARVVFVKEE 192 (307)
T ss_dssp HHHTT--TTTCTTCSSCCSSEEEEETTSCCEEEEECHH
T ss_pred CCCcc--chhhhhhhhhhcccceeeecccccccCCcHH
Confidence 97431 1222333345666777788899999997754
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.79 E-value=2e-19 Score=128.52 Aligned_cols=127 Identities=19% Similarity=0.204 Sum_probs=95.5
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
||||||+|++++++|+++|+ +|+.++|++.... +. +..+..|..++...+. ..+|.|||
T Consensus 8 tGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~---------------~~---~~~~~~d~~~~~~~~~-~~~d~vi~ 68 (212)
T d2a35a1 8 AGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---------------PR---LDNPVGPLAELLPQLD-GSIDTAFC 68 (212)
T ss_dssp ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---------------TT---EECCBSCHHHHGGGCC-SCCSEEEE
T ss_pred ECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc---------------cc---ccccccchhhhhhccc-cchheeee
Confidence 79999999999999999997 6777777644311 12 2334455555544443 37899999
Q ss_pred ccCCCc--------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHhh
Q 029198 79 INGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (197)
Q Consensus 79 ~a~~~~--------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~ 141 (197)
++|... ..+.+++++++ ++++++++||.++++. +.+.| .+|..+|+.+++
T Consensus 69 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~-------------~~~~y~~~K~~~E~~l~~ 135 (212)
T d2a35a1 69 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQE 135 (212)
T ss_dssp CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHTT
T ss_pred eeeeeccccccccccccchhhhhhhcccccccccccccccccccccccc-------------cccchhHHHHHHhhhccc
Confidence 987642 23677888888 8899999999887632 23456 899999999998
Q ss_pred cCC-cEEEEccceeeCCCC
Q 029198 142 KGV-NWTSLRPVYIYGPLN 159 (197)
Q Consensus 142 ~~~-~~~i~r~~~i~g~~~ 159 (197)
.++ +++|+||+.+||+..
T Consensus 136 ~~~~~~~I~Rp~~v~G~~~ 154 (212)
T d2a35a1 136 QGWPQLTIARPSLLFGPRE 154 (212)
T ss_dssp SCCSEEEEEECCSEESTTS
T ss_pred cccccceeeCCcceeCCcc
Confidence 887 599999999999863
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.72 E-value=1.2e-17 Score=120.80 Aligned_cols=138 Identities=14% Similarity=0.128 Sum_probs=101.3
Q ss_pred CCcccchHHHHHHHHHHCCCe--EEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|||||++|++++++|+++|++ |+.+.|++++... ...+++++.+|+.+.+++.++++ ++|+|||
T Consensus 9 tGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~------------~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~ 74 (252)
T d2q46a1 9 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK------------IGGEADVFIGDITDADSINPAFQ--GIDALVI 74 (252)
T ss_dssp ESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH------------TTCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred ECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh------------ccCCcEEEEeeeccccccccccc--cceeeEE
Confidence 799999999999999999964 6677776654221 13578999999999999999998 9999999
Q ss_pred ccCCCc-----------------------------cchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 79 INGREA-----------------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 79 ~a~~~~-----------------------------~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+++... .++.+++..+. ..+++.+.|+...+..... .......
T Consensus 75 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~------~~~~~~~ 148 (252)
T d2q46a1 75 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP------LNKLGNG 148 (252)
T ss_dssp CCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG------GGGGGGC
T ss_pred EEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc------ccccccc
Confidence 987531 23566776666 6778888887666432111 0011122
Q ss_pred cc-hhhhhHHHHHhhcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~~~~~~~~i~r~~~i~g~~ 158 (197)
.| ..+...+.+....+++++++||+++||+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~ 180 (252)
T d2q46a1 149 NILVWKRKAEQYLADSGTPYTIIRAGGLLDKE 180 (252)
T ss_dssp CHHHHHHHHHHHHHHSSSCEEEEEECEEECSC
T ss_pred chhhhhhhhhhhhhcccccceeecceEEECCC
Confidence 23 55666666778899999999999999985
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.64 E-value=1.6e-15 Score=115.70 Aligned_cols=138 Identities=15% Similarity=0.071 Sum_probs=104.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHH-HHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~l~~~~~~~~~d~vi~~ 79 (197)
|||||++|++++++|+++||+|++++|++.+... ......++++++.+|+.|.. .+..++. ++|.+++.
T Consensus 9 tGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--------~~~~~~~~v~~~~gD~~d~~~~~~~a~~--~~~~~~~~ 78 (350)
T d1xgka_ 9 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--------EELQAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFIN 78 (350)
T ss_dssp ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--------HHHHTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEEC
T ss_pred ECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--------hhhcccCCCEEEEeeCCCcHHHHHHHhc--CCceEEee
Confidence 7999999999999999999999999998765321 11122367999999999854 5667777 88888876
Q ss_pred cCCC----ccchHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc-chhhhhHHHHHhhcCCcEEEEccc
Q 029198 80 NGRE----ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRPV 152 (197)
Q Consensus 80 a~~~----~~~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~-~~~k~~~e~~~~~~~~~~~i~r~~ 152 (197)
.... .....++++++. +++++++.||......... .+... +.+|...+.++.+.+++++++|++
T Consensus 79 ~~~~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~---------~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~ 149 (350)
T d1xgka_ 79 TTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP---------WPAVPMWAPKFTVENYVRQLGLPSTFVYAG 149 (350)
T ss_dssp CCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS---------CCCCTTTHHHHHHHHHHHTSSSCEEEEEEC
T ss_pred cccccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCc---------ccchhhhhhHHHHHHHHHhhccCceeeeec
Confidence 5432 234678999988 8888898988654432211 12223 488999999999999999999999
Q ss_pred eeeCC
Q 029198 153 YIYGP 157 (197)
Q Consensus 153 ~i~g~ 157 (197)
++++.
T Consensus 150 ~~~~~ 154 (350)
T d1xgka_ 150 IYNNN 154 (350)
T ss_dssp EEGGG
T ss_pred eeecc
Confidence 98774
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.61 E-value=5e-16 Score=113.34 Aligned_cols=160 Identities=16% Similarity=0.228 Sum_probs=110.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.+++++|++.|++|++.+|+++...... .++.+...++..+.+|++|++++.++++.. ++|+
T Consensus 16 TGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~-----~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi 90 (251)
T d2c07a1 16 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-----DEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI 90 (251)
T ss_dssp ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcee
Confidence 799999999999999999999999999866532211 122333457899999999999998887642 8999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+|+..... ++.++..++ +..+||++||........ ....|
T Consensus 91 lvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~-----------~~~~Y 159 (251)
T d2c07a1 91 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV-----------GQANY 159 (251)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------TCHHH
T ss_pred eeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCC-----------CCHHH
Confidence 99999874221 344555555 567999999966542111 12346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCc
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI 177 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~ 177 (197)
.+|...+.+.+ ..|+++..+.||++-.+.. ..+.....+.+.+..|+
T Consensus 160 ~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~-~~~~~~~~~~~~~~~pl 214 (251)
T d2c07a1 160 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMT-DKISEQIKKNIISNIPA 214 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccc-cccCHHHHHHHHhcCCC
Confidence 89999887653 4789999999999988742 22233344444444443
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.60 E-value=7.6e-16 Score=112.59 Aligned_cols=141 Identities=11% Similarity=0.101 Sum_probs=103.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.+++++|+++|++|++.+|++++..+.. .++.+...++.++.+|++|+++++++++.. ++|+
T Consensus 17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDi 91 (255)
T d1fmca_ 17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHVV-----DEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI 91 (255)
T ss_dssp TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 899999999999999999999999999866532211 223333467899999999999988877542 7999
Q ss_pred EEeccCCCccc-----------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREADE-----------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~~-----------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
+||+||..... ++.++..++ +..++|++||...+.... ....|
T Consensus 92 lvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~-----------~~~~Y~ 160 (255)
T d1fmca_ 92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI-----------NMTSYA 160 (255)
T ss_dssp EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT-----------TCHHHH
T ss_pred eeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcccc-----------ccccch
Confidence 99999875321 333445555 556899999866532111 12346
Q ss_pred hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 ~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ .+|+++..+.||++-.+
T Consensus 161 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 195 (255)
T d1fmca_ 161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD 195 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSH
T ss_pred hHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcCh
Confidence 88999887653 46899999999999775
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.59 E-value=2.2e-15 Score=108.88 Aligned_cols=130 Identities=21% Similarity=0.301 Sum_probs=98.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.+++++|+++|++|++.+|+++.. .++..+.+|++|+++++++++.. ++|+
T Consensus 13 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 76 (237)
T d1uzma1 13 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV 76 (237)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------------cCceEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence 89999999999999999999999999987652 45678999999999988887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..++ +..++|++||........ ....|
T Consensus 77 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~-----------~~~~Y 145 (237)
T d1uzma1 77 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG-----------NQANY 145 (237)
T ss_dssp EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHH
T ss_pred EEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCc-----------ccHHH
Confidence 99999874221 334455555 556999999966532111 12346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..|+++..+.||++..+
T Consensus 146 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~ 181 (237)
T d1uzma1 146 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTD 181 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCCh
Confidence 89999887653 47899999999999765
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.58 E-value=9.2e-15 Score=105.93 Aligned_cols=155 Identities=17% Similarity=0.178 Sum_probs=107.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.+++++|+++|++|++.+|++++..... + .-+...+.+|+.|+++++++++.. ++|+
T Consensus 11 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~---------~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 80 (242)
T d1ulsa_ 11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAA---------E-AVGAHPVVMDVADPASVERGFAEALAHLGRLDG 80 (242)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---------H-TTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---------H-HcCCeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence 799999999999999999999999999865532111 1 125778999999999998887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..++ +...++++||....+.+ ....|
T Consensus 81 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~------------~~~~Y 148 (242)
T d1ulsa_ 81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL------------GQANY 148 (242)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT------------TCHHH
T ss_pred EEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCC------------CCcch
Confidence 99999975321 344566666 44567777764432211 12346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcc
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 178 (197)
.+|...+.+.+ ..|+++..+.||++-.+.. ........+...+..|+.
T Consensus 149 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~-~~~~~~~~~~~~~~~pl~ 204 (242)
T d1ulsa_ 149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMT-AKVPEKVREKAIAATPLG 204 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTT-SSSCHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhh-hcCCHHHHHHHHhcCCCC
Confidence 89999887653 4689999999999987742 223333444444444433
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.58 E-value=1.1e-15 Score=111.02 Aligned_cols=142 Identities=18% Similarity=0.206 Sum_probs=103.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||++.+|.+++++|+++|++|++.+++.++..+.+ ..++.....++.++.+|+.|+++++++++. -++|+
T Consensus 7 TGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~----~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (244)
T d1edoa_ 7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEV----SKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV 82 (244)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence 899999999999999999999998776544322111 122233346788999999999999887764 27999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+|+..... ++.++..|+ +..+||++||...+-... ....|
T Consensus 83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~-----------~~~~Y 151 (244)
T d1edoa_ 83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI-----------GQANY 151 (244)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------TCHHH
T ss_pred cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCC-----------CCHHH
Confidence 99999875321 445666665 567999999976532111 12346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..|+++..+.||++-.+
T Consensus 152 ~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~ 187 (244)
T d1edoa_ 152 AAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASD 187 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSH
T ss_pred HHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccH
Confidence 88999887653 47899999999998765
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.57 E-value=2.3e-15 Score=109.23 Aligned_cols=138 Identities=16% Similarity=0.143 Sum_probs=103.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.+|.++++.|+++|++|++.+|+++..... ..+...+...+.+|++|+++++++++.. ++|+
T Consensus 10 TGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (243)
T d1q7ba_ 10 TGASRGIGRAIAETLAARGAKVIGTATSENGAQAI--------SDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI 81 (243)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH--------HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH--------HHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence 89999999999999999999999999986653211 1222456888999999999988887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+|+..... ++.++..|+ +..++|++||........ ....|
T Consensus 82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~-----------~~~~Y 150 (243)
T d1q7ba_ 82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG-----------GQANY 150 (243)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------TCHHH
T ss_pred ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC-----------CCHHH
Confidence 99999875321 445566665 557999999976542111 12346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ .+|+++..+.||.+-.+
T Consensus 151 ~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~ 186 (243)
T d1q7ba_ 151 AAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETD 186 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEEEEecceEech
Confidence 89999887653 47899999999998665
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.56 E-value=1.4e-14 Score=105.38 Aligned_cols=140 Identities=16% Similarity=0.204 Sum_probs=101.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.++++.|+++|++|++.+|++.+.. ...+.+...++..+.+|++|+++++++++.. ++|+
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~-------~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi 83 (247)
T d2ew8a1 11 TGGANGIGRAIAERFAVEGADIAIADLVPAPEA-------EAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 83 (247)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH-------HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHH-------HHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999765321 1122334567899999999999998887532 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..|+ +..++|++||....... .....|
T Consensus 84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~-----------~~~~~Y 152 (247)
T d2ew8a1 84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI-----------EAYTHY 152 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC-----------SSCHHH
T ss_pred EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC-----------cccccc
Confidence 99999975321 344566666 56799999997653211 012346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.+|...+.+.+ ..|+++..+.||++-.+.
T Consensus 153 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~ 189 (247)
T d2ew8a1 153 ISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT 189 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred hhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence 88999887643 478999999999997763
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.56 E-value=4.4e-15 Score=108.68 Aligned_cols=142 Identities=16% Similarity=0.149 Sum_probs=97.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc------cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~------~~~d 74 (197)
|||++.||.++++.|++.|++|++.+|++++..... .++.+...++..+.+|++++++++++++. -.+|
T Consensus 14 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id 88 (259)
T d1xq1a_ 14 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-----SKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD 88 (259)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcc
Confidence 899999999999999999999999999876533211 12233345789999999999988877643 1589
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
++||+||..... ++.++..|+ +..++|++||....... .....
T Consensus 89 ilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~-----------~~~~~ 157 (259)
T d1xq1a_ 89 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA-----------SVGSI 157 (259)
T ss_dssp EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------CCH
T ss_pred cccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc-----------ccccc
Confidence 999999874221 344555555 56799999996643211 11234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..|+++..+.||++-.+.
T Consensus 158 Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~ 195 (259)
T d1xq1a_ 158 YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL 195 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---
T ss_pred ccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHH
Confidence 6 88999887653 478999999999997663
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.56 E-value=6.1e-15 Score=106.93 Aligned_cols=138 Identities=17% Similarity=0.166 Sum_probs=103.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.++++.|+++|++|++.+|++++.... ..+......++.+|+.|+++++++++.. ++|+
T Consensus 12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi 83 (244)
T d1nffa_ 12 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM--------AAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 83 (244)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence 79999999999999999999999999987653211 1223457889999999999988877542 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..++ +..++|++||...+.... ....|
T Consensus 84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~-----------~~~~Y 152 (244)
T d1nffa_ 84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV-----------ACHGY 152 (244)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------TBHHH
T ss_pred EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccc-----------cccch
Confidence 99999975321 333445555 557899999976532111 12346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..|+++..+.||++-.+
T Consensus 153 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 188 (244)
T d1nffa_ 153 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTP 188 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSG
T ss_pred hhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccCh
Confidence 89999887653 47899999999999765
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.56 E-value=7.2e-15 Score=107.06 Aligned_cols=143 Identities=20% Similarity=0.251 Sum_probs=104.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhh-hhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||++.||.++++.|+++|++|++.+|++++..... .++ .....++.++.+|++|+++++++++.. ++|
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~-----~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 85 (251)
T d1vl8a_ 11 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAA-----QKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD 85 (251)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999876532211 111 222457889999999999998887642 799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
++||+||..... ++.++..|+ +..++|++||...... +......
T Consensus 86 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~----------~~~~~~~ 155 (251)
T d1vl8a_ 86 TVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV----------TMPNISA 155 (251)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC----------CSSSCHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc----------cCccccc
Confidence 999999974221 455667776 4569999998543210 0001234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..|+++..+.||++-.+.
T Consensus 156 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~ 193 (251)
T d1vl8a_ 156 YAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM 193 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTT
T ss_pred hHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHH
Confidence 6 88999887653 478999999999998774
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.55 E-value=6.1e-15 Score=107.54 Aligned_cols=138 Identities=17% Similarity=0.139 Sum_probs=104.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.+++++|+++|++|++.+|++++.... ..+...++.++.+|+.|+++++++++.. ++|+
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (254)
T d1hdca_ 11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAAT--------ARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence 79999999999999999999999999987654321 1223467899999999999998887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..++ +..++|++||...+.... ....|
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~-----------~~~~Y 151 (254)
T d1hdca_ 83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA-----------LTSSY 151 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------TCHHH
T ss_pred EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccccc-----------chhhH
Confidence 99999875321 344555555 567999999976532111 12346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..|+++..+.||++..+
T Consensus 152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~ 187 (254)
T d1hdca_ 152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP 187 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc
Confidence 88999887653 47899999999999653
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.55 E-value=1.2e-14 Score=106.48 Aligned_cols=141 Identities=13% Similarity=0.156 Sum_probs=103.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.++++.|++.|++|++.+|+++...... ..+.+...++..+.+|++|+++++++++.. ++|+
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 85 (260)
T d1zema1 11 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAE-----ASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF 85 (260)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCe
Confidence 799999999999999999999999999866532211 122333457899999999999988887642 7999
Q ss_pred EEeccCCCcc-c------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREAD-E------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~-~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||.... . ++.++..|. +..++|++||...+.... ....
T Consensus 86 lVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~-----------~~~~ 154 (260)
T d1zema1 86 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP-----------NMAA 154 (260)
T ss_dssp EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT-----------TBHH
T ss_pred ehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCc-----------chHH
Confidence 9999986421 1 344455554 567999999976542111 1234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..|+++..+.||++-.+
T Consensus 155 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~ 191 (260)
T d1zema1 155 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 191 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence 6 88999887653 46899999999998765
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.54 E-value=7.1e-15 Score=107.60 Aligned_cols=141 Identities=14% Similarity=0.091 Sum_probs=102.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc----c--Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K--GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~----~--~~d 74 (197)
|||++.||.+++++|+++|++|++.+|++++..... .++.+....+.++.+|++|+++++++++. . ++|
T Consensus 14 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~id 88 (259)
T d2ae2a_ 14 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-----TQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN 88 (259)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCce
Confidence 799999999999999999999999999866543221 22333346788999999999988877642 2 589
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
++||+||..... ++.++..++ +..++|++||........ ....
T Consensus 89 ilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~-----------~~~~ 157 (259)
T d2ae2a_ 89 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP-----------YEAV 157 (259)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT-----------TCHH
T ss_pred EEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccc-----------cccc
Confidence 999999974221 344455554 456999999966531111 1234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..++++..+.||++-.+
T Consensus 158 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 194 (259)
T d2ae2a_ 158 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATS 194 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSH
T ss_pred hHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCH
Confidence 6 89999887653 46899999999999765
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.54 E-value=1.2e-14 Score=106.39 Aligned_cols=142 Identities=19% Similarity=0.186 Sum_probs=103.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.+++++|+++|++|++.+|+.++..... ..++.+...++..+.+|++|+++++++++.. ++|+
T Consensus 13 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~----~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi 88 (261)
T d1geea_ 13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV----LEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDV 88 (261)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 899999999999999999999999999865422111 1222333467889999999999998887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceecccCCCCCCCCCCCCCC-CC
Q 029198 76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KS 127 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~ 127 (197)
+||+||..... ++.++..+. + ...|+++||...... .| ..
T Consensus 89 LVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~------------~~~~~ 156 (261)
T d1geea_ 89 MINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP------------WPLFV 156 (261)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC------------CTTCH
T ss_pred eeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc------------Ccccc
Confidence 99999875321 344555554 3 345889998664311 12 22
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..|+++..+.||++..+.
T Consensus 157 ~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~ 195 (261)
T d1geea_ 157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI 195 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGG
T ss_pred ccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHh
Confidence 46 89999887653 478999999999997763
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.53 E-value=7.9e-15 Score=107.14 Aligned_cols=141 Identities=19% Similarity=0.254 Sum_probs=102.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.+++++|+++|++|++.+|++++..... .++.+...++..+.+|+.|++++.++++.. ++|+
T Consensus 7 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (255)
T d1gega_ 7 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA-----SEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 81 (255)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred cCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 799999999999999999999999999876532211 223333467899999999999998887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC---CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||..... ++.++..+. ...+++++||...+.... ....
T Consensus 82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~-----------~~~~ 150 (255)
T d1gega_ 82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP-----------ELAV 150 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT-----------TBHH
T ss_pred EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCc-----------cccc
Confidence 99999875321 334455444 346799999866531111 1234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..|+++..+.||++-.+
T Consensus 151 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 187 (255)
T d1gega_ 151 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP 187 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred chhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccCh
Confidence 6 88999887653 47899999999998654
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.53 E-value=7.3e-15 Score=107.63 Aligned_cols=142 Identities=19% Similarity=0.247 Sum_probs=103.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhh-hhccCceEEEeecCCCHHHHHhhhhcc-----Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d 74 (197)
|||++.||.+++++|+++|++|++.+|++....+... ..+ .....++.++.+|++|+++++++++.. ++|
T Consensus 10 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~----~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 85 (260)
T d1x1ta1 10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVR----AGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRID 85 (260)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHH----HHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCc
Confidence 8999999999999999999999999998543211110 111 122357889999999999998887642 799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
++||+||..... ++.++..++ +..++|++||........ ....
T Consensus 86 iLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~-----------~~~~ 154 (260)
T d1x1ta1 86 ILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA-----------NKSA 154 (260)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------TCHH
T ss_pred EEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccC-----------Ccch
Confidence 999999975321 344566666 557999999976532111 1234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..|+++..+.||++-.+
T Consensus 155 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 191 (260)
T d1x1ta1 155 YVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTP 191 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-
T ss_pred hhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCCh
Confidence 6 88999887653 46899999999999766
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=1.7e-14 Score=104.90 Aligned_cols=137 Identities=20% Similarity=0.200 Sum_probs=102.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.++++.|+++|++|++.+|+++... .+.+..+++.++.+|++|+++++++++.. ++|+
T Consensus 12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~---------~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi 82 (250)
T d1ydea1 12 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGR---------ALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC 82 (250)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------HHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------HHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999865532 12222357889999999999998887642 7999
Q ss_pred EEeccCCCccc-------------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE-------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~-------------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..|+ +..++|++||........ ....|
T Consensus 83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~-----------~~~~Y 151 (250)
T d1ydea1 83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA-----------QAVPY 151 (250)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT-----------TCHHH
T ss_pred EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccccc-----------Ccchh
Confidence 99999853211 344555555 446999999976532111 12346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..|+++..+.||++-.+
T Consensus 152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~ 187 (250)
T d1ydea1 152 VATKGAVTAMTKALALDESPYGVRVNCISPGNIWTP 187 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred HHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCh
Confidence 88999887653 47899999999998654
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=2.6e-14 Score=103.64 Aligned_cols=137 Identities=14% Similarity=0.110 Sum_probs=102.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||++.+|.+++++|+++|++|++.+|++++... +.+..+++..+.+|+.|++++++++++. ++|++||+
T Consensus 13 TGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~---------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn 83 (244)
T d1pr9a_ 13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDS---------LVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHH---------HHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence 7999999999999999999999999998665321 1222356888999999999999998764 79999999
Q ss_pred cCCCccc------------------------hHHHHHhC-C--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hh
Q 029198 80 NGREADE------------------------VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG 131 (197)
Q Consensus 80 a~~~~~~------------------------~~~ll~~~-~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~ 131 (197)
|+..... ++.++..+ + +..++|++||........ ....| .+
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~-----------~~~~Y~as 152 (244)
T d1pr9a_ 84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT-----------NHSVYCST 152 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-----------TBHHHHHH
T ss_pred cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccccc-----------chhhhhhh
Confidence 9875321 33344433 2 456899999966532111 12346 88
Q ss_pred hhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 132 KLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 132 k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
|...+.+.+ ..++++..+.||.+..+
T Consensus 153 Kaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~ 185 (244)
T d1pr9a_ 153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTS 185 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSH
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcCh
Confidence 999887653 46899999999999775
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.52 E-value=1.1e-14 Score=106.47 Aligned_cols=141 Identities=21% Similarity=0.240 Sum_probs=102.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.+++++|+++|++|++.+|+++...+.. .++.+...++..+.+|++|+++++++++.. ++|+
T Consensus 8 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~-----~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi 82 (257)
T d2rhca1 8 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-----KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV 82 (257)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999866533211 223344467899999999999998887642 6999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREADE------------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+||+||..... ++.++..+. +..++|++||...+.... ...
T Consensus 83 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~-----------~~~ 151 (257)
T d2rhca1 83 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV-----------HAA 151 (257)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCT-----------TCH
T ss_pred EEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccc-----------cch
Confidence 99999875221 333454433 456899999866532111 123
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.| .+|...+.+.+ ..|+++..+.||++-.+
T Consensus 152 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 189 (257)
T d2rhca1 152 PYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 189 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCH
Confidence 46 88999887753 36899999999998654
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.52 E-value=9.2e-15 Score=105.82 Aligned_cols=142 Identities=14% Similarity=0.164 Sum_probs=104.9
Q ss_pred CCcccchHHHHHHHHHHCCCe-------EEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc--
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQ-------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-- 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-- 71 (197)
|||++.+|.+++++|+++|++ |++.+|+++...... .++.+....+.++.+|++|+++++++++..
T Consensus 7 TGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 7 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKIS-----LECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHH-----HHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 799999999999999999987 899999866532211 122333457889999999999988877532
Q ss_pred ---CccEEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCC
Q 029198 72 ---GFDVVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT 122 (197)
Q Consensus 72 ---~~d~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 122 (197)
++|++||+||..... ++.++..|+ +..++|++||...+....
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~--------- 152 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR--------- 152 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCC---------
Confidence 799999999875321 455666666 567999999976542111
Q ss_pred CCCCCcc-hhhhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 123 VDPKSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 123 ~~~~~~~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
....| .+|...+.+. ...|++++.+.||++-.+.
T Consensus 153 --~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~ 194 (240)
T d2bd0a1 153 --HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM 194 (240)
T ss_dssp --TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred --CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCch
Confidence 12346 8898888764 3478999999999997763
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.51 E-value=1.6e-14 Score=105.19 Aligned_cols=140 Identities=19% Similarity=0.195 Sum_probs=100.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.++++.|+++|++|++.+|+++...... +......++.++.+|+.|++++.++++.. ++|+
T Consensus 12 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 85 (251)
T d1zk4a1 12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAA------KSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85 (251)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH------HHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH------HHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceE
Confidence 899999999999999999999999999865532111 11112357899999999999988877642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CC-CcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~-~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+|+..... ++.++..|+ +. .++|++||...+.... ....
T Consensus 86 LVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~-----------~~~~ 154 (251)
T d1zk4a1 86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP-----------SLGA 154 (251)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT-----------TCHH
T ss_pred EEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCC-----------Cchh
Confidence 99999875321 344556665 33 4889999966531110 1224
Q ss_pred c-hhhhhHHHHH---------hhcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVL---------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~---------~~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+. ..+|+++..+.||++-.+
T Consensus 155 Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~ 193 (251)
T d1zk4a1 155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTP 193 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCH
T ss_pred HHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCCh
Confidence 6 8888876543 246899999999999764
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=4.6e-15 Score=107.59 Aligned_cols=141 Identities=16% Similarity=0.155 Sum_probs=103.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||++.+|.+++++|+++|++|++.+|++++..... .++.+.+.++..+.+|++|+++++++++. -.+|+
T Consensus 13 TGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~-----~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idi 87 (244)
T d1yb1a_ 13 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-----AKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI 87 (244)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCce
Confidence 799999999999999999999999999876533211 22334456799999999999998887753 26999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..|+ +..+||++||...+.... ....|
T Consensus 88 linnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~-----------~~~~Y 156 (244)
T d1yb1a_ 88 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP-----------FLLAY 156 (244)
T ss_dssp EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH-----------HHHHH
T ss_pred eEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCC-----------CcHHH
Confidence 99999975321 344566665 557899999976532100 12236
Q ss_pred -hhhhhHHHHHh-------h---cCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------S---KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~---~~~~~~i~r~~~i~g~ 157 (197)
.+|.+.+.+.+ . .|+.++.+.||++-.+
T Consensus 157 ~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~ 195 (244)
T d1yb1a_ 157 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG 195 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCCh
Confidence 88988877642 1 4799999999988665
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.51 E-value=4.4e-14 Score=102.27 Aligned_cols=137 Identities=15% Similarity=0.097 Sum_probs=101.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-CccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~~d~vi~~ 79 (197)
|||++.||.+++++|+++|++|++.+|++++.. ++.+..+++..+.+|+.|++++++++++. ++|++||+
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~---------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn 81 (242)
T d1cyda_ 11 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV---------SLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN 81 (242)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------HHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---------HHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence 799999999999999999999999999865532 12222357889999999999999998864 69999999
Q ss_pred cCCCccc------------------------hHHHHHhCC---CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hh
Q 029198 80 NGREADE------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG 131 (197)
Q Consensus 80 a~~~~~~------------------------~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~ 131 (197)
||..... ++.++..+. ...++|++||...+.... ....| .+
T Consensus 82 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~~~Y~as 150 (242)
T d1cyda_ 82 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP-----------NLITYSST 150 (242)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-----------TBHHHHHH
T ss_pred CccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCC-----------ccccccch
Confidence 9874321 233344332 346899999976532111 12346 88
Q ss_pred hhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 132 KLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 132 k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
|...+.+.+ ..|+++..+.||++-.+
T Consensus 151 Kaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~ 183 (242)
T d1cyda_ 151 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTD 183 (242)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTH
T ss_pred HHHHHHHHHHHHHHhCccCeecccCCCCCccCH
Confidence 999887653 47899999999998765
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.51 E-value=2.1e-14 Score=104.97 Aligned_cols=142 Identities=16% Similarity=0.139 Sum_probs=101.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhh----cc--Ccc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AK--GFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~----~~--~~d 74 (197)
|||++.+|.+++++|+++|++|++.+|++++..... ..+.+....+.++.+|+.+.++++++++ .. .+|
T Consensus 12 TGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~-----~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~id 86 (258)
T d1ae1a_ 12 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL-----EIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN 86 (258)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcE
Confidence 799999999999999999999999999875532211 2233344678889999999998887764 22 589
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+++|+|+..... ++.++..+. +..++|++||........ ....
T Consensus 87 ilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~-----------~~~~ 155 (258)
T d1ae1a_ 87 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP-----------SVSL 155 (258)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT-----------TCHH
T ss_pred EEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccc-----------cchh
Confidence 999999875321 233444444 667999999977642111 1224
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..++++..+.||++..+.
T Consensus 156 Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~ 193 (258)
T d1ae1a_ 156 YSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 193 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred HHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcc
Confidence 6 88999887653 468999999999998764
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.51 E-value=3.2e-14 Score=103.94 Aligned_cols=139 Identities=16% Similarity=0.144 Sum_probs=102.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.++++.|+++|++|++.+|+.++... ...+...++..+.+|++|+++++++++.. ++|+
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~--------~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi 82 (256)
T d1k2wa_ 11 TGSARGIGRAFAEAYVREGARVAIADINLEAARA--------TAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI 82 (256)
T ss_dssp ETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHH--------HHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 7999999999999999999999999998655321 12233567899999999999999887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhC-C--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~-~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||..... ++.++..+ + +..+||++||...+... .....
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----------~~~~~ 151 (256)
T d1k2wa_ 83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE-----------ALVGV 151 (256)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc-----------ccccc
Confidence 99999974321 23334332 2 34689999997653211 11234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..|+++..+.||++-.+.
T Consensus 152 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~ 189 (256)
T d1k2wa_ 152 YCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH 189 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred hhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh
Confidence 6 88999887653 478999999999987763
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.50 E-value=1.9e-14 Score=104.63 Aligned_cols=135 Identities=15% Similarity=0.081 Sum_probs=100.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.+|.++++.|+++|++|++.+|+++..+ ..+ ..+..++.+|++|+++++++++.. ++|+
T Consensus 11 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~----------~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 79 (248)
T d2d1ya1 11 TGGARGIGRAIAQAFAREGALVALCDLRPEGKE----------VAE-AIGGAFFQVDLEDERERVRFVEEAAYALGRVDV 79 (248)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH----------HHH-HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH----------HHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCe
Confidence 799999999999999999999999999865421 111 124567899999999888877642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
+||+||..... ++.++..|+ +..+||++||...+... .....|
T Consensus 80 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~-----------~~~~~Y 148 (248)
T d2d1ya1 80 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-----------QENAAY 148 (248)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----------TTBHHH
T ss_pred EEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc-----------cccchh
Confidence 99999875321 344555554 45699999997654211 112346
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..|+++..+.||++-.+
T Consensus 149 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~ 184 (248)
T d2d1ya1 149 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE 184 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCc
Confidence 89999887643 47899999999998654
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.49 E-value=1.8e-14 Score=105.32 Aligned_cols=141 Identities=18% Similarity=0.232 Sum_probs=102.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh--ccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||++.||.++++.|+++|++|++.+|++++..... .++.+ ...++..+.+|++|+++++++++.. ++
T Consensus 10 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~-----~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i 84 (258)
T d1iy8a_ 10 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASK-----AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI 84 (258)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence 799999999999999999999999999876532111 11111 1346888999999999998887642 79
Q ss_pred cEEEeccCCCcc-c------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREAD-E------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (197)
Q Consensus 74 d~vi~~a~~~~~-~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 126 (197)
|++||+||.... . ++.++..++ +..++|++||....-.. ...
T Consensus 85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~-----------~~~ 153 (258)
T d1iy8a_ 85 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI-----------GNQ 153 (258)
T ss_dssp SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC-----------SSB
T ss_pred CEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC-----------CCc
Confidence 999999986421 1 333455555 56789999996653211 112
Q ss_pred Ccc-hhhhhHHHHH-------hhcCCcEEEEccceeeCC
Q 029198 127 SRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 127 ~~~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~ 157 (197)
..| .+|...+.+. ...|+++..+.||++..+
T Consensus 154 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~ 192 (258)
T d1iy8a_ 154 SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTP 192 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred hHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCH
Confidence 346 8899888764 347899999999999765
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.48 E-value=7.6e-14 Score=102.59 Aligned_cols=142 Identities=13% Similarity=0.177 Sum_probs=102.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||++.||.+++++|+++|++|++.+|+++...+.. .+ ......+.++.+|+.|+++++++++. -++|+
T Consensus 12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~-----~~-l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 85 (268)
T d2bgka1 12 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC-----NN-IGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI 85 (268)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HH-HCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HH-hcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcce
Confidence 799999999999999999999999999866532111 01 11234678899999999999888763 27999
Q ss_pred EEeccCCCcc--------------------------chHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 76 VYDINGREAD--------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 76 vi~~a~~~~~--------------------------~~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+||+||.... .++.++..|. +..++|++||...+.... ....
T Consensus 86 lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~----------~~~~ 155 (268)
T d2bgka1 86 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE----------GVSH 155 (268)
T ss_dssp EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------TSCH
T ss_pred eccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc----------cccc
Confidence 9999986311 0344566655 556899999866532110 0122
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..|+++..+.||++-.+.
T Consensus 156 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~ 194 (268)
T d2bgka1 156 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPL 194 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCC
T ss_pred ccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChH
Confidence 46 78999887653 478999999999998774
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.46 E-value=1.3e-13 Score=100.51 Aligned_cols=138 Identities=19% Similarity=0.220 Sum_probs=101.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.||.++++.|+++|++|++.+|++++..+. ..+...+..++.+|+.|+++++++++.. ++|+
T Consensus 12 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi 83 (253)
T d1hxha_ 12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL--------AAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH--------HHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence 79999999999999999999999999976553211 1223457889999999999888887642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
+||+||..... ++.++..|+ +..+||++||....... .....|
T Consensus 84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~-----------~~~~~Y~ 152 (253)
T d1hxha_ 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPI-----------EQYAGYS 152 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCC-----------TTBHHHH
T ss_pred EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCc-----------ccccccc
Confidence 99999975321 445666666 45799999996653111 112346
Q ss_pred hhhhhHHHHHh-------h--cCCcEEEEccceeeCC
Q 029198 130 KGKLNTESVLE-------S--KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 ~~k~~~e~~~~-------~--~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ . +++++..+.||++..+
T Consensus 153 asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~ 189 (253)
T d1hxha_ 153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTP 189 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCH
T ss_pred chhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCH
Confidence 88988877643 2 4589999999999754
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=1.1e-14 Score=108.49 Aligned_cols=144 Identities=10% Similarity=0.145 Sum_probs=99.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhh-hhccCceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
|||++.||.+++++|++.|++|++.+|+.++......+. ...+ .....++..+.+|++|+++++++++. -++|
T Consensus 18 TGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el-~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD 96 (297)
T d1yxma1 18 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADEL-QANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKIN 96 (297)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-HhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCeE
Confidence 799999999999999999999999999865532110000 0000 01135789999999999999888763 2799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
++||+|+..... ++.++..+. +...+|++|+....+.+ ....
T Consensus 97 iLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~------------~~~~ 164 (297)
T d1yxma1 97 FLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFP------------LAVH 164 (297)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCT------------TCHH
T ss_pred EEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccccc------------cccc
Confidence 999999874321 344555555 45678877653322110 1234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..|+++..+.||++..+
T Consensus 165 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 201 (297)
T d1yxma1 165 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQ 201 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCT
T ss_pred chhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCc
Confidence 5 88998887653 46899999999999765
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.46 E-value=8.1e-14 Score=100.83 Aligned_cols=156 Identities=18% Similarity=0.234 Sum_probs=105.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhcc-----CccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-----~~d~ 75 (197)
|||++.+|.+++++|+++|++|++.+|+.++..+ ...+...++.++.+|++++++++++++.. ++|+
T Consensus 11 tGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi 82 (241)
T d2a4ka1 11 TGAASGIGRAALDLFAREGASLVAVDREERLLAE--------AVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 82 (241)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 7999999999999999999999999998765422 12233467889999999999998877642 7999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
+||+|+..... ++.++..+++...++++||...... .....| .
T Consensus 83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~------------~~~~~Y~~ 150 (241)
T d2a4ka1 83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA------------FGLAHYAA 150 (241)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH------------HHHHHHHH
T ss_pred eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc------------cCccccch
Confidence 99998864221 2334444444455666655432111 012236 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCc
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI 177 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~ 177 (197)
+|...+.+.+ ..|+++..+.||.+-.+.. ..+.....+...+..++
T Consensus 151 sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~-~~~~~~~~~~~~~~~p~ 203 (241)
T d2a4ka1 151 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT-AGLPPWAWEQEVGASPL 203 (241)
T ss_dssp CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGG-TTSCHHHHHHHHHTSTT
T ss_pred hhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHH-HhhhHhHHHHHHhCCCC
Confidence 8999988753 4689999999999866532 22233334444444333
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.45 E-value=8.7e-14 Score=101.82 Aligned_cols=172 Identities=15% Similarity=0.163 Sum_probs=109.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||++.||.++++.|+++|++|++.+|++++..+... ....+...++..+.+|++|++++.++++. -++|+
T Consensus 15 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 90 (260)
T d1h5qa_ 15 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTE----KVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG 90 (260)
T ss_dssp ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHH----HHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcE
Confidence 7999999999999999999999999998876432110 11122345789999999999999888753 27999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC---CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+|+..... ++.++..+. ....++.+||........... ........
T Consensus 91 lVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~----~~~~~~~~ 166 (260)
T d1h5qa_ 91 LIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL----NGSLTQVF 166 (260)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET----TEECSCHH
T ss_pred ecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc----ccCccccc
Confidence 99999874221 333455543 345666666655432111000 00011224
Q ss_pred c-hhhhhHHHHH-------hhcCCcEEEEccceeeCCCCCCChHHHHHHHHHcCCCcccCC
Q 029198 129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 181 (197)
Q Consensus 129 ~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (197)
| .+|...+.+. ...|+++..+.||++-.+.. ..+.....+.+.+..|+.-++
T Consensus 167 Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~-~~~~~~~~~~~~~~~pl~R~g 226 (260)
T d1h5qa_ 167 YNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT-AHMDKKIRDHQASNIPLNRFA 226 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG-GGSCHHHHHHHHHTCTTSSCB
T ss_pred hhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcch-hccCHHHHHHHHhcCCCCCCc
Confidence 6 8899888764 34789999999999977632 122233444444444443333
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.44 E-value=2.7e-13 Score=99.04 Aligned_cols=144 Identities=18% Similarity=0.183 Sum_probs=101.0
Q ss_pred CCcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~----~~~d~ 75 (197)
|||+|.||.+++++|+++|+ +|+++.|+..+.... . ....++.....++.++.+|++|++++.++++. .++|.
T Consensus 15 TGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~-~-~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~ 92 (259)
T d2fr1a1 15 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGA-G-ELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA 92 (259)
T ss_dssp ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTH-H-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred ECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHH-H-HHHHHHHhccccccccccccchHHHHHHhhccccccccccc
Confidence 79999999999999999998 688888874432110 0 00112233346799999999999999888764 25999
Q ss_pred EEeccCCCccc--------------------hHHHHHhCC--CCCcEEEEecceec-ccCCCCCCCCCCCCCCCCcc-hh
Q 029198 76 VYDINGREADE--------------------VEPILDALP--NLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRH-KG 131 (197)
Q Consensus 76 vi~~a~~~~~~--------------------~~~ll~~~~--~~~~~v~~Ss~~vy-g~~~~~~~~e~~~~~~~~~~-~~ 131 (197)
|+|+++..... ..++.++++ ...++|++||.... |... ...| .+
T Consensus 93 vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~------------~~~YaAa 160 (259)
T d2fr1a1 93 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG------------LGGYAPG 160 (259)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT------------CTTTHHH
T ss_pred cccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcc------------cHHHHHH
Confidence 99999875321 344556665 56789999996643 3221 2235 88
Q ss_pred hhhHHHHH---hhcCCcEEEEccceeeCCC
Q 029198 132 KLNTESVL---ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 132 k~~~e~~~---~~~~~~~~i~r~~~i~g~~ 158 (197)
|...+.+. +..|++++.+.||.+.+++
T Consensus 161 ka~l~~la~~~~~~Gi~v~~I~pg~~~~~g 190 (259)
T d2fr1a1 161 NAYLDGLAQQRRSDGLPATAVAWGTWAGSG 190 (259)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCBC---
T ss_pred HHhHHHHHHHHHhCCCCEEECCCCcccCCc
Confidence 88887764 4579999999999987654
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.44 E-value=1.9e-13 Score=99.89 Aligned_cols=140 Identities=20% Similarity=0.173 Sum_probs=98.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||++.||.+++++|+++|++|++..++.++..+.. ...+.+...++..+.+|++|+++++++++. -.+|+
T Consensus 12 TGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~----~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi 87 (259)
T d1ja9a_ 12 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV----VAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF 87 (259)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHH----HHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 899999999999999999999998877654422111 122333446789999999999988887753 27999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCCCCCcEEEEecce-ecccCCCCCCCCCCCCCC-CCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAG-VYLKSDLLPHCETDTVDP-KSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~~-~~~~ 129 (197)
+||+||..... ++.++..|++..+++.++|.. .... .| ...|
T Consensus 88 linnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~------------~~~~~~Y 155 (259)
T d1ja9a_ 88 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG------------IPNHALY 155 (259)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS------------CCSCHHH
T ss_pred EEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccC------------CCCchhH
Confidence 99999975321 344556666334666666533 2211 11 2236
Q ss_pred -hhhhhHHHHHh-------hcCCcEEEEccceeeC
Q 029198 130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYG 156 (197)
Q Consensus 130 -~~k~~~e~~~~-------~~~~~~~i~r~~~i~g 156 (197)
.+|...+.+.+ ..|+++..+.||++-.
T Consensus 156 ~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T 190 (259)
T d1ja9a_ 156 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKT 190 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSS
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccC
Confidence 88999887653 4689999999999864
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=1.1e-13 Score=100.95 Aligned_cols=141 Identities=18% Similarity=0.188 Sum_probs=99.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh--ccCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||++.||.+++++|+++|++|++.+|++++..... .++.+ ...++.++.+|++|+++++++++.. ++
T Consensus 9 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 83 (254)
T d2gdza1 9 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCK-----AALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL 83 (254)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 799999999999999999999999999876532111 11111 1246889999999999998887532 79
Q ss_pred cEEEeccCCCccc----------------hHHHHHhCC--C---CCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hh
Q 029198 74 DVVYDINGREADE----------------VEPILDALP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG 131 (197)
Q Consensus 74 d~vi~~a~~~~~~----------------~~~ll~~~~--~---~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~ 131 (197)
|++||+|+..... ++.++..++ + ..+||++||...+-.. .....| .+
T Consensus 84 DilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~-----------~~~~~Y~as 152 (254)
T d2gdza1 84 DILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----------AQQPVYCAS 152 (254)
T ss_dssp CEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TTCHHHHHH
T ss_pred CeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC-----------CCccchHHH
Confidence 9999999986332 334455554 1 2469999997653111 112246 88
Q ss_pred hhhHHHHH---------hhcCCcEEEEccceeeCC
Q 029198 132 KLNTESVL---------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 132 k~~~e~~~---------~~~~~~~~i~r~~~i~g~ 157 (197)
|...+.+. ...|+++..+.||.+-.+
T Consensus 153 Kaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~ 187 (254)
T d2gdza1 153 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTA 187 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSH
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCCh
Confidence 88877653 246899999999998543
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.42 E-value=2.2e-13 Score=98.10 Aligned_cols=131 Identities=17% Similarity=0.215 Sum_probs=94.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~~ 79 (197)
|||++.||.++++.|+++|++|++.+|+++... .....++.+|+.+ .+.+.+.+. ++|++||+
T Consensus 10 TGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~--------------~~~~~~~~~Dv~~~~~~~~~~~g--~iD~lVnn 73 (234)
T d1o5ia_ 10 LAASRGIGRAVADVLSQEGAEVTICARNEELLK--------------RSGHRYVVCDLRKDLDLLFEKVK--EVDILVLN 73 (234)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--------------HTCSEEEECCTTTCHHHHHHHSC--CCSEEEEC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH--------------hcCCcEEEcchHHHHHHHHHHhC--CCcEEEec
Confidence 799999999999999999999999999865422 1245678899986 344445554 89999999
Q ss_pred cCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhh
Q 029198 80 NGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK 132 (197)
Q Consensus 80 a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k 132 (197)
||..... ++.++..++ +..++|++||....... .....| .+|
T Consensus 74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~-----------~~~~~Y~asK 142 (234)
T d1o5ia_ 74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI-----------ENLYTSNSAR 142 (234)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHHHHHHH
T ss_pred ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccc-----------cccccchhHH
Confidence 9864221 344555555 55689999986653211 112235 789
Q ss_pred hhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 133 LNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 133 ~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...+.+.+ ..|+++..+.||++-.+.
T Consensus 143 aal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~ 175 (234)
T d1o5ia_ 143 MALTGFLKTLSFEVAPYGITVNCVAPGWTETER 175 (234)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHHHHHhcccCeEEeecccCccchhh
Confidence 98887643 468999999999997764
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.40 E-value=3.8e-13 Score=99.05 Aligned_cols=141 Identities=17% Similarity=0.140 Sum_probs=98.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc---cCceEEEeecCCCHHHHHhhhhcc-----C
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSAK-----G 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~l~~~~~~~-----~ 72 (197)
|||++.||.+++++|++.|++|++.+|++++..... .++.+. ..++..+.+|++|+++++++++.. +
T Consensus 10 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 84 (274)
T d1xhla_ 10 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK-----QQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK 84 (274)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 899999999999999999999999999865532111 111111 246889999999999988877642 7
Q ss_pred ccEEEeccCCCccc--------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 73 FDVVYDINGREADE--------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 73 ~d~vi~~a~~~~~~--------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
+|++||+||..... ++.++..++ +...++++||....... .
T Consensus 85 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~-----------~ 153 (274)
T d1xhla_ 85 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH-----------S 153 (274)
T ss_dssp CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC-----------T
T ss_pred ceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccC-----------C
Confidence 99999999863110 334455554 44567777764432110 0
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
....| .+|...+.+.+ ..|+++..+.||++-.+
T Consensus 154 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~ 194 (274)
T d1xhla_ 154 GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATG 194 (274)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSS
T ss_pred CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCc
Confidence 12346 88999887653 47899999999999765
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.40 E-value=4.9e-13 Score=97.36 Aligned_cols=142 Identities=18% Similarity=0.053 Sum_probs=99.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCC-CHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~l~~~~~~-----~~~d 74 (197)
|||++.||.+++++|+++|++|+++.|+.++..... .........++.++.+|+. +.++++++++. -++|
T Consensus 11 TGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iD 86 (254)
T d1sbya1 11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPTALA----ELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVD 86 (254)
T ss_dssp ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHH----HHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCC
T ss_pred ecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHH----HHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999876532110 0111222347899999997 55667666543 2799
Q ss_pred EEEeccCCCccc----------------hHHHHHhCC-----CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhh
Q 029198 75 VVYDINGREADE----------------VEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK 132 (197)
Q Consensus 75 ~vi~~a~~~~~~----------------~~~ll~~~~-----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k 132 (197)
++||+||..... ++.++..+. ...++|++||...+.... ....| .+|
T Consensus 87 ilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~-----------~~~~Y~asK 155 (254)
T d1sbya1 87 ILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH-----------QVPVYSASK 155 (254)
T ss_dssp EEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-----------TSHHHHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCC-----------CCHHHHHHH
Confidence 999999975322 344555554 235799999866542111 12246 889
Q ss_pred hhHHHHH-------hhcCCcEEEEccceeeCC
Q 029198 133 LNTESVL-------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 133 ~~~e~~~-------~~~~~~~~i~r~~~i~g~ 157 (197)
.....+. ...++++..+.||++..+
T Consensus 156 aal~~~t~~la~el~~~gIrVn~I~PG~v~T~ 187 (254)
T d1sbya1 156 AAVVSFTNSLAKLAPITGVTAYSINPGITRTP 187 (254)
T ss_dssp HHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred HHHHHHHHHHHhhccccCeEEEEEEeCCCcCc
Confidence 8887764 357899999999999865
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=2.7e-13 Score=98.95 Aligned_cols=143 Identities=16% Similarity=0.161 Sum_probs=99.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc--cCceEEEeecCCCHHHHHhhhhcc-----Cc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~-----~~ 73 (197)
|||++.||.++++.|+++|++|++.+|++++..+.. .++.+. ...+..+.+|+.+++++.++++.. ++
T Consensus 16 TGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~i 90 (257)
T d1xg5a_ 16 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-----AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV 90 (257)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 799999999999999999999999999866532211 112221 246889999999999988877532 79
Q ss_pred cEEEeccCCCccc------------------------hHHHHHhCC----CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE------------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~~------------------------~~~ll~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|++||+|+..... ++.++..++ ...++|++||...+... +...
T Consensus 91 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~---------p~~~ 161 (257)
T d1xg5a_ 91 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL---------PLSV 161 (257)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---------SCGG
T ss_pred CEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC---------CCcc
Confidence 9999999875321 233444443 34699999996653211 0011
Q ss_pred CCcc-hhhhhHHHHH---------hhcCCcEEEEccceeeCC
Q 029198 126 KSRH-KGKLNTESVL---------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~---------~~~~~~~~i~r~~~i~g~ 157 (197)
...| .+|...+.+. ...++++..+.||.+-.+
T Consensus 162 ~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~ 203 (257)
T d1xg5a_ 162 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ 203 (257)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCCh
Confidence 2236 8888887654 236899999999987654
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.39 E-value=4.9e-13 Score=97.53 Aligned_cols=141 Identities=15% Similarity=0.122 Sum_probs=94.4
Q ss_pred CCccc--chHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG--~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+| .||.+++++|+++|++|++.+|+++.... ..+..........+.+|+.|+++++++++. -++
T Consensus 14 TGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (256)
T d1ulua_ 14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE------AEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL 87 (256)
T ss_dssp ESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH------HHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred ECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH------HHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCc
Confidence 79988 79999999999999999988887543211 012222335678899999999998887753 279
Q ss_pred cEEEeccCCCccc------------------------hHHHHHh----CCCCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE------------------------VEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~~------------------------~~~ll~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|++||+|+..... ...+.+. +++..++|++||........ .
T Consensus 88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~-----------~ 156 (256)
T d1ulua_ 88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP-----------K 156 (256)
T ss_dssp EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT-----------T
T ss_pred eEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCC-----------C
Confidence 9999999863110 1112222 22335799999866532111 1
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ .+|+++..+.||.+..+.
T Consensus 157 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~ 197 (256)
T d1ulua_ 157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeecc
Confidence 2346 88999887653 478999999999998764
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.39 E-value=5.6e-13 Score=98.07 Aligned_cols=140 Identities=16% Similarity=0.156 Sum_probs=97.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh---ccCceEEEeecCCCHHHHHhhhhcc-----C
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAK-----G 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~l~~~~~~~-----~ 72 (197)
|||++.||.++++.|+++|++|++.+|++++..... .++.+ ...++..+.+|++|+++++++++.. +
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~ 85 (272)
T d1xkqa_ 11 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-----QIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK 85 (272)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred eCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 899999999999999999999999999876532111 11111 1246899999999999998877642 7
Q ss_pred ccEEEeccCCCccc----------------------------hHHHHHhCC-CCCcEEEEec-ceecccCCCCCCCCCCC
Q 029198 73 FDVVYDINGREADE----------------------------VEPILDALP-NLEQFIYCSS-AGVYLKSDLLPHCETDT 122 (197)
Q Consensus 73 ~d~vi~~a~~~~~~----------------------------~~~ll~~~~-~~~~~v~~Ss-~~vyg~~~~~~~~e~~~ 122 (197)
+|++||+||..... ++.++..++ +...+|+++| .....
T Consensus 86 iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~------------ 153 (272)
T d1xkqa_ 86 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ------------ 153 (272)
T ss_dssp CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS------------
T ss_pred ceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcccc------------
Confidence 99999999874210 233444554 3345665555 33221
Q ss_pred CCC-CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 123 VDP-KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 123 ~~~-~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
..| ...| .+|...+.+.+ ..|+++..+.||++-.+
T Consensus 154 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 197 (272)
T d1xkqa_ 154 AQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG 197 (272)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred CCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcch
Confidence 111 2346 88999887653 47899999999999765
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.39 E-value=1.4e-12 Score=95.96 Aligned_cols=143 Identities=16% Similarity=0.082 Sum_probs=101.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||++.||.+++++|+++|++|++.+|+.++..... ...+.+...++.++.+|+.|++++.++++. -.+|+
T Consensus 24 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~----~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi 99 (272)
T d1g0oa_ 24 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV----VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI 99 (272)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHH----HHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCc
Confidence 799999999999999999999999998765422111 112233346789999999999999888753 27999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-h
Q 029198 76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~ 130 (197)
++|+++..... .+.++..|+...++++++|...... .......| .
T Consensus 100 lV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~----------~~~~~~~Y~a 169 (272)
T d1g0oa_ 100 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK----------AVPKHAVYSG 169 (272)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS----------SCSSCHHHHH
T ss_pred cccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccc----------cccchhhHHH
Confidence 99999874221 3455666664467777776432110 01122346 8
Q ss_pred hhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 131 ~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
+|...+.+.+ ..|+++..+.||++-.+
T Consensus 170 sKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~ 203 (272)
T d1g0oa_ 170 SKGAIETFARCMAIDMADKKITVNVVAPGGIKTD 203 (272)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred HHHHHHHHHHHHHHHhchhCeEEEEEccCCcCCh
Confidence 8988887653 47999999999998653
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=4.7e-13 Score=99.10 Aligned_cols=145 Identities=16% Similarity=0.082 Sum_probs=99.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCC--CCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc---cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ--LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~---~~~d~ 75 (197)
|||++.||.+++++|++.|.+|+.+.+........ +.+ ....+.....++..+.+|++|++++.++++. -.+|+
T Consensus 8 TGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~idi 86 (285)
T d1jtva_ 8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWE-AARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVDV 86 (285)
T ss_dssp SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHH-HHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCCSE
T ss_pred ccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHH-HHHHHhccCCceEEEeccccchHhhhhhhhhccccchhh
Confidence 89999999999999999998766665543321110 000 0001112235789999999999999888764 36999
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc
Q 029198 76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~ 129 (197)
++|+++....+ ++.++..|+ +..++|++||....-.. .....|
T Consensus 87 lvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~-----------~~~~~Y 155 (285)
T d1jtva_ 87 LVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL-----------PFNDVY 155 (285)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----------TTCHHH
T ss_pred hhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCC-----------CCchHH
Confidence 99999875321 445666665 66799999997653111 112347
Q ss_pred -hhhhhHHHHH-------hhcCCcEEEEccceeeCC
Q 029198 130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 -~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+. ...|++++.+.||++-.+
T Consensus 156 ~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~ 191 (285)
T d1jtva_ 156 CASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCCh
Confidence 8899988764 347999999999999765
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.38 E-value=5.8e-13 Score=97.57 Aligned_cols=141 Identities=16% Similarity=0.178 Sum_probs=97.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh---ccCceEEEeecCCCHHHHHhhhhcc-----C
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAK-----G 72 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~l~~~~~~~-----~ 72 (197)
|||++.||.+++++|+++|++|++.+|++++..... .++.. ...++..+.+|++|++++.++++.. +
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~ 85 (264)
T d1spxa_ 11 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR-----QQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK 85 (264)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 899999999999999999999999999876532111 11111 1246899999999999998887642 7
Q ss_pred ccEEEeccCCCcc----------------------------chHHHHHhCC-CCCcEEEEeccee-cccCCCCCCCCCCC
Q 029198 73 FDVVYDINGREAD----------------------------EVEPILDALP-NLEQFIYCSSAGV-YLKSDLLPHCETDT 122 (197)
Q Consensus 73 ~d~vi~~a~~~~~----------------------------~~~~ll~~~~-~~~~~v~~Ss~~v-yg~~~~~~~~e~~~ 122 (197)
+|++||+||.... .++.++..++ +...+|+++|... ..
T Consensus 86 iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~------------ 153 (264)
T d1spxa_ 86 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH------------ 153 (264)
T ss_dssp CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS------------
T ss_pred CCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccc------------
Confidence 9999999986311 0344555555 4456776666432 11
Q ss_pred CCC-CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 123 VDP-KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 123 ~~~-~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
..| ...| .+|...+.+.+ ..|+++..+.||++-.+.
T Consensus 154 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~ 198 (264)
T d1spxa_ 154 ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF 198 (264)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred cCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence 112 2346 88999887653 478999999999997653
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=1.6e-12 Score=94.13 Aligned_cols=137 Identities=15% Similarity=0.153 Sum_probs=99.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-cCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-~~~d~vi~~ 79 (197)
|||++.+|.++++.|+++|++|++.+|++++.... .....+....+|+.+.+.+....+. ..+|++||+
T Consensus 12 TGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~----------~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ 81 (245)
T d2ag5a1 12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQEL----------EKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV 81 (245)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGG----------GGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----------HhccCCceeeeeccccccccccccccccceeEEec
Confidence 79999999999999999999999999987653221 1135678888999988877766654 379999999
Q ss_pred cCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-hhh
Q 029198 80 NGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK 132 (197)
Q Consensus 80 a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k 132 (197)
+|..... ++.++..+. +..++|++||...- ..+......| .+|
T Consensus 82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----------~~~~~~~~~Y~~sK 151 (245)
T d2ag5a1 82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS----------VKGVVNRCVYSTTK 151 (245)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----------TBCCTTBHHHHHHH
T ss_pred ccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc----------cCCccchhHHHHHH
Confidence 9875321 333444444 55689999985420 0011122346 899
Q ss_pred hhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 133 LNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 133 ~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
...+.+.+ ..|+++..+.||.+-.|
T Consensus 152 aal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~ 183 (245)
T d2ag5a1 152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTP 183 (245)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESCEECH
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeeceeech
Confidence 99988753 46899999999999775
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.36 E-value=1.1e-12 Score=96.62 Aligned_cols=138 Identities=18% Similarity=0.182 Sum_probs=98.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||++.||.+++++|+++|++|++.+|++++... ...+...++..+.+|+.++++++++++. -.+|+
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~--------~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi 82 (276)
T d1bdba_ 11 TGGASGLGRALVDRFVAEGAKVAVLDKSAERLAE--------LETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT 82 (276)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence 7999999999999999999999999998655321 1122346789999999999988887653 27999
Q ss_pred EEeccCCCccc-----------------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 76 VYDINGREADE-----------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 76 vi~~a~~~~~~-----------------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
+||+||..... ++.++..++ +..++|+++|...+-... .
T Consensus 83 lvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~-----------~ 151 (276)
T d1bdba_ 83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNG-----------G 151 (276)
T ss_dssp EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTS-----------S
T ss_pred ccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCC-----------C
Confidence 99999853110 333455555 346788888754321100 1
Q ss_pred CCcc-hhhhhHHHHHhh------cCCcEEEEccceeeCC
Q 029198 126 KSRH-KGKLNTESVLES------KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~~------~~~~~~i~r~~~i~g~ 157 (197)
...| .+|...+.+.+. .++++..+.||++-.+
T Consensus 152 ~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~ 190 (276)
T d1bdba_ 152 GPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSD 190 (276)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSC
T ss_pred CchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecC
Confidence 2246 889888876531 3599999999999665
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.34 E-value=4.8e-12 Score=91.73 Aligned_cols=143 Identities=17% Similarity=0.199 Sum_probs=98.7
Q ss_pred CCcccchHHHHHHHHHH---CCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-------
Q 029198 1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------- 70 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~------- 70 (197)
|||++.||.+++++|++ +|++|++.+|++++.... .++.....++.++.+|++|+++++++++.
T Consensus 8 TGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 8 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL------EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH------HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred eCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHH------HHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 89999999999999974 689999999998764321 12233356899999999999888776542
Q ss_pred cCccEEEeccCCCccc-------------------------hHHHHHhCC-------------CCCcEEEEecceecccC
Q 029198 71 KGFDVVYDINGREADE-------------------------VEPILDALP-------------NLEQFIYCSSAGVYLKS 112 (197)
Q Consensus 71 ~~~d~vi~~a~~~~~~-------------------------~~~ll~~~~-------------~~~~~v~~Ss~~vyg~~ 112 (197)
-++|++||+||..... ++.++..++ +..++|++||..-. .
T Consensus 82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~--~ 159 (248)
T d1snya_ 82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS--I 159 (248)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC--S
T ss_pred CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc--c
Confidence 3699999999863211 222333332 24679999985421 1
Q ss_pred CCCCCCCCCCCCC-CCcc-hhhhhHHHHH-------hhcCCcEEEEccceeeCCC
Q 029198 113 DLLPHCETDTVDP-KSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 113 ~~~~~~e~~~~~~-~~~~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~~ 158 (197)
.. .+.+ ...| .+|.+...+. ...++++..+.||++-.+.
T Consensus 160 ~~-------~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m 207 (248)
T d1snya_ 160 QG-------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 207 (248)
T ss_dssp TT-------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred CC-------CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence 10 1112 2236 8898887654 3578999999999998764
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.34 E-value=1.7e-13 Score=99.75 Aligned_cols=136 Identities=13% Similarity=0.073 Sum_probs=94.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||++.+|.+++..|+++|++|++.+|+.+.... +... ...+..+|+.+.++++++++. -++|+
T Consensus 6 TGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~---------~~~~--~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDi 74 (252)
T d1zmta1 6 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE---------LEAF--AETYPQLKPMSEQEPAELIEAVTSAYGQVDV 74 (252)
T ss_dssp SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH---------HHHH--HHHCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHhh--hCcEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence 8999999999999999999999999997665321 1111 122345777776666555432 17999
Q ss_pred EEeccCCCccc-------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 76 VYDINGREADE-------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 76 vi~~a~~~~~~-------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
+||+||..... ++.++..|+ +..++|++||...+.... ....
T Consensus 75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~-----------~~~~ 143 (252)
T d1zmta1 75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK-----------ELST 143 (252)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT-----------TCHH
T ss_pred EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccc-----------cccc
Confidence 99998863210 334555555 557999999976532111 1234
Q ss_pred c-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 129 ~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
| .+|...+.+.+ ..|+++..+.||++-.+.
T Consensus 144 Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~ 181 (252)
T d1zmta1 144 YTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSED 181 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBT
T ss_pred cccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcc
Confidence 6 89999887653 478999999999997764
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=8.5e-13 Score=97.22 Aligned_cols=153 Identities=16% Similarity=0.130 Sum_probs=102.5
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
|||++.||.+++++|++. |++|++.+|+.++..... .++.....++.++.+|+.|.++++++++. -++|
T Consensus 9 TGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD 83 (275)
T d1wmaa1 9 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-----QQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD 83 (275)
T ss_dssp SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence 899999999999999986 899999999877643211 12233346789999999999998877653 2799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCCCCCcEEEEecceecc-cCCCCC-------------
Q 029198 75 VVYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYL-KSDLLP------------- 116 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~~~~~~v~~Ss~~vyg-~~~~~~------------- 116 (197)
++||+||..... ++.++..|+...++|++||..... .....+
T Consensus 84 iLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~ 163 (275)
T d1wmaa1 84 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE 163 (275)
T ss_dssp EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred EEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccch
Confidence 999999974221 333455555346899999954321 100000
Q ss_pred ----------------CCCCCCCCCCCcc-hhhhhHHHHHh-----------hcCCcEEEEccceeeCCC
Q 029198 117 ----------------HCETDTVDPKSRH-KGKLNTESVLE-----------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 117 ----------------~~e~~~~~~~~~~-~~k~~~e~~~~-----------~~~~~~~i~r~~~i~g~~ 158 (197)
........+...| .+|.....+.+ ..++.+..+.||++-.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m 233 (275)
T d1wmaa1 164 EELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 233 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred hhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc
Confidence 0001111233446 88888765421 148999999999997764
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.33 E-value=1.4e-12 Score=97.21 Aligned_cols=146 Identities=14% Similarity=0.086 Sum_probs=98.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCC-CchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE-SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
|||++.||.+++++|+++|++|++.+|+.+......... ......+.........+|+.|.++++++++. -++|
T Consensus 13 TGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~G~iD 92 (302)
T d1gz6a_ 13 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRID 92 (302)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHTSCCC
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHcCCCC
Confidence 899999999999999999999999999765432111110 0111122233456677888887666555432 2799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC--CCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
++||+||..... ++.++..|+ +..+||++||...+.... ....
T Consensus 93 iLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~-----------~~~~ 161 (302)
T d1gz6a_ 93 VVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF-----------GQAN 161 (302)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------TCHH
T ss_pred EEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC-----------CcHH
Confidence 999999975321 445666666 567999999966432111 1234
Q ss_pred c-hhhhhHHHHH-------hhcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+. ..+|+++..+.||.+-.+
T Consensus 162 Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~ 198 (302)
T d1gz6a_ 162 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRM 198 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTT
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcc
Confidence 6 8999988765 347899999999987443
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.32 E-value=1.4e-12 Score=96.89 Aligned_cols=142 Identities=17% Similarity=0.164 Sum_probs=96.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhh-hhccCceEEEeecCCCHHHHHhhhhc-----cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d 74 (197)
|||+|.||.+++++|++.|++|++.+|+.++..... .++ ......+..+.+|+.+.+++.++++. -++|
T Consensus 31 TGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~-----~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 105 (294)
T d1w6ua_ 31 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATA-----EQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN 105 (294)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----HHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccc
Confidence 799999999999999999999999999876532211 111 12245788999999999998876643 3799
Q ss_pred EEEeccCCCccc------------------------hHHHHHhCC---CCCcEEEEecceecccCCCCCCCCCCCCCCCC
Q 029198 75 VVYDINGREADE------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (197)
Q Consensus 75 ~vi~~a~~~~~~------------------------~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 127 (197)
+++|+|+..... ....+..+. ....++.+||........ ...
T Consensus 106 ilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~-----------~~~ 174 (294)
T d1w6ua_ 106 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG-----------FVV 174 (294)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT-----------TCH
T ss_pred hhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccc-----------ccc
Confidence 999999875321 111111111 344566666644321111 122
Q ss_pred cc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 128 ~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.| .+|...+.+.+ ..|+++..+.||++-.+.
T Consensus 175 ~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~ 213 (294)
T d1w6ua_ 175 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG 213 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred hHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccch
Confidence 36 88999887753 468999999999997664
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.29 E-value=2.3e-12 Score=94.09 Aligned_cols=141 Identities=18% Similarity=0.113 Sum_probs=99.2
Q ss_pred CCcccchHHHHHHHHHH---CCCeEEEEecCCCCccCCCCCCCchhhhh--ccCceEEEeecCCCHHHHHhhhhc-----
Q 029198 1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA----- 70 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~----- 70 (197)
|||++.||.+++++|++ +|++|++.+|++++..... .++.. ...++..+.+|++++++++++++.
T Consensus 12 TGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~ 86 (259)
T d1oaaa_ 12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK-----EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP 86 (259)
T ss_dssp SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH-----HHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred eCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHH-----HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhh
Confidence 89999999999999986 6999999999876532211 11111 124688999999999988887642
Q ss_pred ----cCccEEEeccCCCcc---------------------------chHHHHHhCC-C---CCcEEEEecceecccCCCC
Q 029198 71 ----KGFDVVYDINGREAD---------------------------EVEPILDALP-N---LEQFIYCSSAGVYLKSDLL 115 (197)
Q Consensus 71 ----~~~d~vi~~a~~~~~---------------------------~~~~ll~~~~-~---~~~~v~~Ss~~vyg~~~~~ 115 (197)
..+|+++|+|+.... .++.++..++ . ..++|++||...+...
T Consensus 87 ~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~--- 163 (259)
T d1oaaa_ 87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY--- 163 (259)
T ss_dssp CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC---
T ss_pred hhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCC---
Confidence 257889999875210 0344566666 2 3589999996653211
Q ss_pred CCCCCCCCCCCCcc-hhhhhHHHHHh-----hcCCcEEEEccceeeCC
Q 029198 116 PHCETDTVDPKSRH-KGKLNTESVLE-----SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 116 ~~~e~~~~~~~~~~-~~k~~~e~~~~-----~~~~~~~i~r~~~i~g~ 157 (197)
.....| .+|...+.+.+ ..++++..+.||++-.+
T Consensus 164 --------~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~ 203 (259)
T d1oaaa_ 164 --------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND 203 (259)
T ss_dssp --------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred --------ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence 112346 88999887653 47899999999999765
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.28 E-value=4.2e-12 Score=93.17 Aligned_cols=142 Identities=15% Similarity=0.120 Sum_probs=98.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||++.+|.+++++|+++|++|++++|++++...... .........+..+.+|..+.+......+. -.+|+
T Consensus 20 TGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~ 95 (269)
T d1xu9a_ 20 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS----HCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDM 95 (269)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccc
Confidence 8999999999999999999999999998765332110 01112235688889999998777665542 27899
Q ss_pred EEeccCCCccc------------------------hHHHHHhCC-CCCcEEEEecceecccCCCCCCCCCCCCCCCCcc-
Q 029198 76 VYDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH- 129 (197)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~- 129 (197)
++++|+..... ++.++..++ +..++|++||...+-.. .....|
T Consensus 96 li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~-----------p~~~~Y~ 164 (269)
T d1xu9a_ 96 LILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY-----------PMVAAYS 164 (269)
T ss_dssp EEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC-----------TTCHHHH
T ss_pred cccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCC-----------CCchHHH
Confidence 99998864211 344555555 55789999996653111 112346
Q ss_pred hhhhhHHHHHh---------hcCCcEEEEccceeeCC
Q 029198 130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 130 ~~k~~~e~~~~---------~~~~~~~i~r~~~i~g~ 157 (197)
.+|...+.+.+ ..+++++.+.||.+-.+
T Consensus 165 asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~ 201 (269)
T d1xu9a_ 165 ASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 201 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc
Confidence 89999887642 24688999999998654
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.27 E-value=1.2e-11 Score=89.71 Aligned_cols=145 Identities=16% Similarity=0.104 Sum_probs=93.8
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-------c
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K 71 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-------~ 71 (197)
|||++.||.+++++|+++|+ .|++.+|+.++..... .....++.++.+|+.|.++++++++. .
T Consensus 9 TGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~--------~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 80 (250)
T d1yo6a1 9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK--------SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH--------TCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred eCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH--------HhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence 89999999999999999995 7888899876532110 11235789999999999888777642 2
Q ss_pred CccEEEeccCCCcc-c------------------------hHHHHHhCC-------------CCCcEEEEecceecccCC
Q 029198 72 GFDVVYDINGREAD-E------------------------VEPILDALP-------------NLEQFIYCSSAGVYLKSD 113 (197)
Q Consensus 72 ~~d~vi~~a~~~~~-~------------------------~~~ll~~~~-------------~~~~~v~~Ss~~vyg~~~ 113 (197)
.+|++||+||.... . ++.++..++ ...+++.+|+...+-...
T Consensus 81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 160 (250)
T d1yo6a1 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN 160 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence 59999999996321 0 222333332 124677777644321111
Q ss_pred CCCCCCCCCCCCCCcc-hhhhhHHHHH-------hhcCCcEEEEccceeeCC
Q 029198 114 LLPHCETDTVDPKSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 114 ~~~~~e~~~~~~~~~~-~~k~~~e~~~-------~~~~~~~~i~r~~~i~g~ 157 (197)
. ......+...| .+|.+...+. +..|+++..+.||++-.+
T Consensus 161 ~----~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~ 208 (250)
T d1yo6a1 161 T----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN 208 (250)
T ss_dssp C----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---
T ss_pred c----ccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCC
Confidence 1 01111222236 8898887664 357899999999999665
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.22 E-value=2.6e-11 Score=87.09 Aligned_cols=131 Identities=17% Similarity=0.143 Sum_probs=87.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHh-------hhhccCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-------SLSAKGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~-------~~~~~~~ 73 (197)
|||+|.+|.+++++|+++|++|++++|++.+.. .......+|..+.+.... .++.-++
T Consensus 8 TGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 72 (235)
T d1ooea_ 8 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV 72 (235)
T ss_dssp ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc---------------cccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence 799999999999999999999999999876521 123344455555443332 2222369
Q ss_pred cEEEeccCCCccc-------------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 74 DVVYDINGREADE-------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 74 d~vi~~a~~~~~~-------------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|++||+||....+ .+.++..++.-.++|++||...+.... ....
T Consensus 73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~-----------~~~~ 141 (235)
T d1ooea_ 73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP-----------SMIG 141 (235)
T ss_dssp EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-----------TBHH
T ss_pred eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcc-----------cccc
Confidence 9999999863211 223444455336899999976542111 1234
Q ss_pred c-hhhhhHHHHHhh---------cCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLES---------KGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~~---------~~~~~~i~r~~~i~g~ 157 (197)
| .+|.+.+.+.+. .++++..+.||.+-.+
T Consensus 142 Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~ 180 (235)
T d1ooea_ 142 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP 180 (235)
T ss_dssp HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH
T ss_pred hHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc
Confidence 7 899999887532 3678888999998764
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.21 E-value=3.4e-11 Score=86.54 Aligned_cols=131 Identities=12% Similarity=0.038 Sum_probs=88.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhh-------hccCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL-------SAKGF 73 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~-------~~~~~ 73 (197)
|||+|.+|.+++++|+++|++|+++++.+.+.. ........+..+.++...+. ...++
T Consensus 8 TGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 72 (236)
T d1dhra_ 8 YGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV 72 (236)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------cccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence 799999999999999999999999998765421 22334445555544433322 22368
Q ss_pred cEEEeccCCCccc-------------------------hHHHHHhCCCCCcEEEEecceecccCCCCCCCCCCCCCCCCc
Q 029198 74 DVVYDINGREADE-------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (197)
Q Consensus 74 d~vi~~a~~~~~~-------------------------~~~ll~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 128 (197)
|++||+||..... .+.++..+++..++|++||........ ....
T Consensus 73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~-----------~~~~ 141 (236)
T d1dhra_ 73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP-----------GMIG 141 (236)
T ss_dssp EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-----------TBHH
T ss_pred eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCcc-----------CCcc
Confidence 9999999852110 233444455346899999976532111 1234
Q ss_pred c-hhhhhHHHHHh---------hcCCcEEEEccceeeCC
Q 029198 129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 129 ~-~~k~~~e~~~~---------~~~~~~~i~r~~~i~g~ 157 (197)
| .+|...+.+.+ ..++++..+.||++..+
T Consensus 142 Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~ 180 (236)
T d1dhra_ 142 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP 180 (236)
T ss_dssp HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH
T ss_pred cHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC
Confidence 6 89999988753 24799999999999775
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.18 E-value=1.1e-10 Score=84.73 Aligned_cols=141 Identities=14% Similarity=0.114 Sum_probs=95.5
Q ss_pred CCccc--chHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG--~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+| .+|.++++.|+++|++|++.+|+++.... . .++............|..+.+++...+.. -.+
T Consensus 11 TGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (258)
T d1qsga_ 11 TGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGR-V-----EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF 84 (258)
T ss_dssp CCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHH-H-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred ECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H-----HHHHhhcCCcceeecccchHHHHHHHHHHhhhccccc
Confidence 79998 79999999999999999999998543211 1 12233345678888899998777666542 368
Q ss_pred cEEEeccCCCccc-------------------------hHHHHHhC----CCCCcEEEEecceecccCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE-------------------------VEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (197)
Q Consensus 74 d~vi~~a~~~~~~-------------------------~~~ll~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 124 (197)
|.++|+++..... ...+..++ ++...++++||...... ..
T Consensus 85 d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~-----------~~ 153 (258)
T d1qsga_ 85 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA-----------IP 153 (258)
T ss_dssp EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------CT
T ss_pred ceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC-----------CC
Confidence 9999998764211 11122222 23346888888654211 01
Q ss_pred CCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 125 ~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
....| .+|.+.+.+.+ ..|+++..++||.+..+.
T Consensus 154 ~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~ 195 (258)
T d1qsga_ 154 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 195 (258)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccc
Confidence 12346 88999988754 368999999999998775
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=2.3e-10 Score=82.66 Aligned_cols=139 Identities=14% Similarity=0.165 Sum_probs=96.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~d~ 75 (197)
|||++.||.+++++|+++|++|++.+|+.++... ...+..........|+.+.+.++..... ...|.
T Consensus 11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (248)
T d2o23a1 11 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEA--------QAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 82 (248)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH--------HHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--------HHHHhCCCcccccccccccccccccccccccccccccc
Confidence 7999999999999999999999999998776432 2233346788889999998766655432 36888
Q ss_pred EEeccCCCccc------------------------------hHHHHHhCC--------CCCcEEEEecceecccCCCCCC
Q 029198 76 VYDINGREADE------------------------------VEPILDALP--------NLEQFIYCSSAGVYLKSDLLPH 117 (197)
Q Consensus 76 vi~~a~~~~~~------------------------------~~~ll~~~~--------~~~~~v~~Ss~~vyg~~~~~~~ 117 (197)
+++.++....+ ++.++..+. +..+||++||...+....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~---- 158 (248)
T d2o23a1 83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV---- 158 (248)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT----
T ss_pred cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCC----
Confidence 88776542110 222333322 224799999976542111
Q ss_pred CCCCCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 118 CETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 118 ~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
....| .+|...+.+.+ ..|+++..+.||.+..+.
T Consensus 159 -------~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~ 200 (248)
T d2o23a1 159 -------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 200 (248)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-
T ss_pred -------CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecch
Confidence 12346 89999988753 478999999999987763
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.05 E-value=8.9e-10 Score=78.97 Aligned_cols=129 Identities=13% Similarity=0.115 Sum_probs=88.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhh----ccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~----~~~~d~v 76 (197)
|||++.||.+++++|+++|++|++.+|+++. .+.....+|+.+......+.. ....+.+
T Consensus 7 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 69 (241)
T d1uaya_ 7 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV 69 (241)
T ss_dssp ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------------ccceEeeccccchhhhHHHHHhhhccccccch
Confidence 7999999999999999999999999998765 346678899998776665543 2345555
Q ss_pred EeccCCCcc----------------------------chHHHHHh------CC--CCCcEEEEecceecccCCCCCCCCC
Q 029198 77 YDINGREAD----------------------------EVEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCET 120 (197)
Q Consensus 77 i~~a~~~~~----------------------------~~~~ll~~------~~--~~~~~v~~Ss~~vyg~~~~~~~~e~ 120 (197)
++.++.... .++.++.. +. +..++|++||...+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~------- 142 (241)
T d1uaya_ 70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI------- 142 (241)
T ss_dssp EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-------
T ss_pred hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC-------
Confidence 554433110 01222222 12 345899999976542211
Q ss_pred CCCCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
....| .+|...+.+.+ .+|+++..+.||++-.+
T Consensus 143 ----~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~ 183 (241)
T d1uaya_ 143 ----GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTP 183 (241)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSH
T ss_pred ----CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCccccc
Confidence 12346 89999887653 47899999999999765
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.01 E-value=7.4e-10 Score=81.02 Aligned_cols=141 Identities=13% Similarity=0.069 Sum_probs=92.6
Q ss_pred CCccc--chHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc-----cCc
Q 029198 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (197)
Q Consensus 1 tGatG--~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-----~~~ 73 (197)
|||+| .||.+++++|+++|++|++.+|+++... .. .++.+......+..+|+.+.+++.++++. -.+
T Consensus 11 TGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~-~~-----~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~i 84 (274)
T d2pd4a1 11 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEK-RV-----RPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL 84 (274)
T ss_dssp ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHH-HH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred ECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH-----HHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCC
Confidence 68877 7999999999999999999999854311 11 22333345678889999998887777642 279
Q ss_pred cEEEeccCCCccc------------------------hHHHHHhC-C--CC-CcEEEEecceecccCCCCCCCCCCCCCC
Q 029198 74 DVVYDINGREADE------------------------VEPILDAL-P--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (197)
Q Consensus 74 d~vi~~a~~~~~~------------------------~~~ll~~~-~--~~-~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 125 (197)
|+++|+++..... .......+ + +. ..++.+|+.+..... ..
T Consensus 85 d~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~-----------~~ 153 (274)
T d2pd4a1 85 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM-----------AH 153 (274)
T ss_dssp EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----------TT
T ss_pred CeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc-----------cc
Confidence 9999999864221 11111111 1 22 235555554443211 11
Q ss_pred CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 126 ~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
...| .+|...+.+.+ ..|+++..+.||++..+.
T Consensus 154 ~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~ 194 (274)
T d2pd4a1 154 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA 194 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcc
Confidence 2345 78888887653 378999999999998764
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.89 E-value=2.5e-09 Score=77.73 Aligned_cols=79 Identities=24% Similarity=0.278 Sum_probs=53.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh-ccCceEEEeecCCC----HHHHHhhhhc-----
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKD----YDFVKSSLSA----- 70 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~----~~~l~~~~~~----- 70 (197)
|||++.+|.+++++|+++|++|++.+|+.++..+.+. .++.. ..........|..+ .+.+.++++.
T Consensus 7 TGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (266)
T d1mxha_ 7 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLV----AELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF 82 (266)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH----HHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999998765321110 11211 22456666666554 3334343321
Q ss_pred cCccEEEeccCCC
Q 029198 71 KGFDVVYDINGRE 83 (197)
Q Consensus 71 ~~~d~vi~~a~~~ 83 (197)
-++|++||+||..
T Consensus 83 g~iDilvnnAG~~ 95 (266)
T d1mxha_ 83 GRCDVLVNNASAY 95 (266)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCccC
Confidence 2799999999864
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=98.85 E-value=5.2e-09 Score=76.13 Aligned_cols=139 Identities=18% Similarity=0.077 Sum_probs=86.7
Q ss_pred CCccc--chHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhc--------
Q 029198 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------- 70 (197)
Q Consensus 1 tGatG--~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-------- 70 (197)
|||+| .+|.+++++|+++|++|++.+|+..+..+.+. .....+...+.+|+.+++++.++++.
T Consensus 12 tGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~-------~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~ 84 (268)
T d2h7ma1 12 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT-------DRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 84 (268)
T ss_dssp CCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH-------TTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred ECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH-------HHcCCceeeEeeecccccccccccchhhhccccC
Confidence 68654 59999999999999999999988654311110 11235678899999998766665432
Q ss_pred cCccEEEeccCCCccc-------------------------hHHHHHhCC---CCCcEEEEecceecccCCCCCCCCCCC
Q 029198 71 KGFDVVYDINGREADE-------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDT 122 (197)
Q Consensus 71 ~~~d~vi~~a~~~~~~-------------------------~~~ll~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 122 (197)
..+|+++|+++..... ......... +...++.++|.......
T Consensus 85 ~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~---------- 154 (268)
T d2h7ma1 85 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM---------- 154 (268)
T ss_dssp CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC----------
T ss_pred CCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccC----------
Confidence 2589999999863110 000111111 22334444433322110
Q ss_pred CCCCCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCC
Q 029198 123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (197)
Q Consensus 123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~ 157 (197)
+ ....| .+|...+.+.+ ..++++..+.||.+-.+
T Consensus 155 p-~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~ 196 (268)
T d2h7ma1 155 P-AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL 196 (268)
T ss_dssp T-TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred c-ccchhhccccchhhccccchhhhhccCCcceEEecCCCCCh
Confidence 0 12246 78988887653 46899999999988653
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=98.84 E-value=4.6e-09 Score=76.99 Aligned_cols=79 Identities=16% Similarity=0.093 Sum_probs=53.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhh------------------ccCceEEEeecCCCHH
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE------------------FSSKILHLKGDRKDYD 62 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~d~~~~~ 62 (197)
|||++.||.+++++|+++|++|++.+++.++....+. .++.+ .........+|+++.+
T Consensus 8 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~ 83 (284)
T d1e7wa_ 8 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT 83 (284)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH----HHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence 8999999999999999999999998887543211110 00000 0123344567788888
Q ss_pred HHHhhhhc-----cCccEEEeccCCC
Q 029198 63 FVKSSLSA-----KGFDVVYDINGRE 83 (197)
Q Consensus 63 ~l~~~~~~-----~~~d~vi~~a~~~ 83 (197)
+++++++. -++|++||+||..
T Consensus 84 ~v~~~~~~~~~~~G~iDiLVnnAG~~ 109 (284)
T d1e7wa_ 84 RCAELVAACYTHWGRCDVLVNNASSF 109 (284)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEecCCcc
Confidence 88887653 2799999999874
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.83 E-value=6.9e-10 Score=76.99 Aligned_cols=75 Identities=19% Similarity=0.190 Sum_probs=60.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|||+|.+|..+++.|++.|++|++++|+.++..... +.......+....+|+.|.+++++++. ++|+|||++
T Consensus 29 tGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~~~~~~d~~~~~~~~~~~~--~iDilin~A 100 (191)
T d1luaa1 29 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA------DSVNKRFKVNVTAAETADDASRAEAVK--GAHFVFTAG 100 (191)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH------HHHHHHHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred ECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHH------HHHHhccchhhhhhhcccHHHHHHHhc--CcCeeeecC
Confidence 799999999999999999999999999976643211 111112456778899999999999998 899999999
Q ss_pred CCC
Q 029198 81 GRE 83 (197)
Q Consensus 81 ~~~ 83 (197)
+..
T Consensus 101 g~g 103 (191)
T d1luaa1 101 AIG 103 (191)
T ss_dssp CTT
T ss_pred ccc
Confidence 864
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.53 E-value=2.2e-07 Score=66.75 Aligned_cols=136 Identities=20% Similarity=0.172 Sum_probs=76.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhh----c--cCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----A--KGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~----~--~~~d 74 (197)
|||++.||.+++++|++.|++|++++|++.+. ..|+.+.+....... + ..+|
T Consensus 7 TGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~----------------------~~d~~~~~~~~~~~~~~~~~~~~~id 64 (257)
T d1fjha_ 7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEV----------------------IADLSTAEGRKQAIADVLAKCSKGMD 64 (257)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE----------------------ECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECChHHH----------------------HHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence 79999999999999999999999999976542 235555544433321 1 2699
Q ss_pred EEEeccCCCccc-----------------hHHHHHhCC--CCCcEEEEecceecc-cCCCCCCCC---------------
Q 029198 75 VVYDINGREADE-----------------VEPILDALP--NLEQFIYCSSAGVYL-KSDLLPHCE--------------- 119 (197)
Q Consensus 75 ~vi~~a~~~~~~-----------------~~~ll~~~~--~~~~~v~~Ss~~vyg-~~~~~~~~e--------------- 119 (197)
.++++|+..... ....++... .......+++..... .....+...
T Consensus 65 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~ 144 (257)
T d1fjha_ 65 GLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVE 144 (257)
T ss_dssp EEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHH
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehh
Confidence 999999864221 111222222 333455554432211 000000000
Q ss_pred CCCCCC-CCcc-hhhhhHHHHHh-------hcCCcEEEEccceeeCCC
Q 029198 120 TDTVDP-KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (197)
Q Consensus 120 ~~~~~~-~~~~-~~k~~~e~~~~-------~~~~~~~i~r~~~i~g~~ 158 (197)
.....+ ...| .+|...+.+.+ ..|+++..+.||++-.+.
T Consensus 145 ~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~ 192 (257)
T d1fjha_ 145 HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL 192 (257)
T ss_dssp TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----
T ss_pred ccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChh
Confidence 000001 1136 88998887653 468999999999997663
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.50 E-value=1.8e-07 Score=69.86 Aligned_cols=146 Identities=7% Similarity=-0.042 Sum_probs=81.0
Q ss_pred CC--cccchHHHHHHHHHHCCCeEEEEecCCCCcc-------CCCCCCCchhhhhccCceEEEee---------------
Q 029198 1 MG--GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-------QQLPGESDQEFAEFSSKILHLKG--------------- 56 (197)
Q Consensus 1 tG--atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~--------------- 56 (197)
|| ++..||.++++.|+++|.+|++..+...... ..+.........+.........+
T Consensus 8 TGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (329)
T d1uh5a_ 8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEETK 87 (329)
T ss_dssp ECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCCHHHH
T ss_pred eCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccchhhh
Confidence 67 5569999999999999999999887543210 00000000000000111222222
Q ss_pred -----cCCCHHHHHhhhhc-----cCccEEEeccCCCcc---c-----------------------hHHHHHhCCCCCcE
Q 029198 57 -----DRKDYDFVKSSLSA-----KGFDVVYDINGREAD---E-----------------------VEPILDALPNLEQF 100 (197)
Q Consensus 57 -----d~~~~~~l~~~~~~-----~~~d~vi~~a~~~~~---~-----------------------~~~ll~~~~~~~~~ 100 (197)
|+.+.++++++++. -++|++||+++.... . ++.++..++...++
T Consensus 88 ~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsI 167 (329)
T d1uh5a_ 88 NNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSI 167 (329)
T ss_dssp TSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccccccc
Confidence 44444333333321 279999999875321 0 12222223333579
Q ss_pred EEEecceecccCCCCCCCCCCCCCCCCcc-hhhhhHHHHHh--------hcCCcEEEEccceeeC
Q 029198 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE--------SKGVNWTSLRPVYIYG 156 (197)
Q Consensus 101 v~~Ss~~vyg~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~--------~~~~~~~i~r~~~i~g 156 (197)
|.+||...... .+.....| .+|...+.+.+ ++|+++..+.||.+-.
T Consensus 168 v~iss~~~~~~----------~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T 222 (329)
T d1uh5a_ 168 ISLTYHASQKV----------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222 (329)
T ss_dssp EEEECGGGTSC----------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred ccceeehhccc----------ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence 99987654211 11123356 78999887653 3699999999998754
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.46 E-value=6.2e-07 Score=65.78 Aligned_cols=29 Identities=17% Similarity=0.090 Sum_probs=26.2
Q ss_pred CCccc--chHHHHHHHHHHCCCeEEEEecCC
Q 029198 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGK 29 (197)
Q Consensus 1 tGatG--~vG~~l~~~L~~~g~~V~~~~r~~ 29 (197)
|||+| .||.++++.|+++|++|++.+|++
T Consensus 14 TGass~~GIG~aiA~~la~~Ga~Vvi~~~~~ 44 (297)
T d1d7oa_ 14 AGIADDNGYGWAVAKSLAAAGAEILVGTWVP 44 (297)
T ss_dssp ECCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred ECCCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence 68877 899999999999999999998854
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.96 E-value=5.9e-06 Score=53.16 Aligned_cols=67 Identities=16% Similarity=0.156 Sum_probs=53.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhh-hhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~~~d~vi~~a~ 81 (197)
|.|.+|+.+++.|.+.|++|++++.+++...... ......+.+|.++++.+.++ ++ ++|.||-+..
T Consensus 7 G~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~-----------~~~~~~~~gd~~~~~~l~~a~i~--~a~~vi~~~~ 73 (134)
T d2hmva1 7 GLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-----------SYATHAVIANATEENELLSLGIR--NFEYVIVAIG 73 (134)
T ss_dssp CCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT-----------TTCSEEEECCTTCTTHHHHHTGG--GCSEEEECCC
T ss_pred CCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH-----------HhCCcceeeecccchhhhccCCc--cccEEEEEcC
Confidence 4599999999999999999999999877643322 13467788999999999887 55 7898876665
Q ss_pred C
Q 029198 82 R 82 (197)
Q Consensus 82 ~ 82 (197)
.
T Consensus 74 ~ 74 (134)
T d2hmva1 74 A 74 (134)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.79 E-value=2.3e-05 Score=50.25 Aligned_cols=86 Identities=17% Similarity=0.283 Sum_probs=60.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|.+.|++|++++++++.... +.+ ..+...+.+|..|++.+.++-- ..+|.++-+...
T Consensus 7 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~---------~~~-~~~~~vi~Gd~~~~~~l~~~~i-~~a~~vv~~t~~ 75 (132)
T d1lssa_ 7 GIGRVGYTLAKSLSEKGHDIVLIDIDKDICKK---------ASA-EIDALVINGDCTKIKTLEDAGI-EDADMYIAVTGK 75 (132)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHH-HCSSEEEESCTTSHHHHHHTTT-TTCSEEEECCSC
T ss_pred CCCHHHHHHHHHHHHCCCCcceecCChhhhhh---------hhh-hhhhhhccCcccchhhhhhcCh-hhhhhhcccCCc
Confidence 45999999999999999999999998765321 111 1257889999999999998843 278988865532
Q ss_pred CccchHHHHHh--CC--CCCcEEE
Q 029198 83 EADEVEPILDA--LP--NLEQFIY 102 (197)
Q Consensus 83 ~~~~~~~ll~~--~~--~~~~~v~ 102 (197)
...|++-. ++ +.+++|.
T Consensus 76 ---d~~N~~~~~~~k~~~~~~iI~ 96 (132)
T d1lssa_ 76 ---EEVNLMSSLLAKSYGINKTIA 96 (132)
T ss_dssp ---HHHHHHHHHHHHHTTCCCEEE
T ss_pred ---HHHHHHHHHHHHHcCCceEEE
Confidence 23344322 22 5666663
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.70 E-value=4e-05 Score=51.85 Aligned_cols=99 Identities=14% Similarity=0.237 Sum_probs=67.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+||+|.+|...+......|.+|+++++++++.. ...+......+..-|-...+.+.+.....++|+||++.
T Consensus 36 ~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~---------~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~v 106 (182)
T d1v3va2 36 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA---------YLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNV 106 (182)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH---------HHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred EeCCCchhHHHHHHHHccCCEEEEeCCCHHHHH---------HHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEec
Confidence 589999999999999999999999999876521 11122222333333444455666666656899999998
Q ss_pred CCCccchHHHHHhCCCCCcEEEEecceecc
Q 029198 81 GREADEVEPILDALPNLEQFIYCSSAGVYL 110 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~v~~Ss~~vyg 110 (197)
|. +.....++.++...+++.++....|+
T Consensus 107 G~--~~~~~~~~~l~~~G~~v~~G~~~~~~ 134 (182)
T d1v3va2 107 GG--EFLNTVLSQMKDFGKIAICGAISVYN 134 (182)
T ss_dssp CH--HHHHHHGGGEEEEEEEEECCCGGGTT
T ss_pred Cc--hhhhhhhhhccCCCeEEeecceeecc
Confidence 73 45677777777335777766555543
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.64 E-value=4.2e-05 Score=49.82 Aligned_cols=91 Identities=19% Similarity=0.178 Sum_probs=50.0
Q ss_pred CCcccchHHHHHHHHHHCC----CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~v 76 (197)
+||||++|+.+++.|+++. .+++.+.++......... ..-.....++.+.+. ++ ++|++
T Consensus 7 vGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~-----------~~~~~~~~~~~~~~~----~~--~~Div 69 (146)
T d1t4ba1 7 IGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSF-----------GGTTGTLQDAFDLEA----LK--ALDII 69 (146)
T ss_dssp ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGG-----------GTCCCBCEETTCHHH----HH--TCSEE
T ss_pred ECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccc-----------cCCceeeecccchhh----hh--cCcEE
Confidence 5999999999999988764 378877766544221100 011112223334333 34 89999
Q ss_pred EeccCCCccchHHHHHhCC-CCCcEEEEecceecc
Q 029198 77 YDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
|.+++. .-.+.+...+. ...+.+.++..+.|.
T Consensus 70 F~a~~~--~~s~~~~~~~~~~g~~~~VID~Ss~fR 102 (146)
T d1t4ba1 70 VTCQGG--DYTNEIYPKLRESGWQGYWIDAASSLR 102 (146)
T ss_dssp EECSCH--HHHHHHHHHHHHTTCCCEEEECSSTTT
T ss_pred EEecCc--hHHHHhhHHHHhcCCCeecccCCcccc
Confidence 988853 33444444443 223333444444443
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.58 E-value=8.4e-05 Score=49.65 Aligned_cols=67 Identities=16% Similarity=0.181 Sum_probs=50.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|+|.+|.++++.|.+.||+|++++|+.++... +.+..+.......+..+.......+. ..|.++.+.
T Consensus 9 GaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~---------l~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~i~~~ 75 (182)
T d1e5qa1 9 GSGFVTRPTLDVLTDSGIKVTVACRTLESAKK---------LSAGVQHSTPISLDVNDDAALDAEVA--KHDLVISLI 75 (182)
T ss_dssp CCSTTHHHHHHHHHTTTCEEEEEESCHHHHHH---------HHTTCTTEEEEECCTTCHHHHHHHHT--TSSEEEECS
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEECChHHHHH---------HHhcccccccccccccchhhhHhhhh--ccceeEeec
Confidence 45999999999999999999999999876432 22223455556667777777778787 788887655
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.46 E-value=0.00021 Score=44.10 Aligned_cols=63 Identities=13% Similarity=0.008 Sum_probs=51.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|+|.+|+-++....+.|+++++++.+++.....+ .-.++.+|+.|.+.+.++....++|+|-.
T Consensus 18 GgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v-------------a~~~i~~~~~d~~~l~~~~~~~~~DviT~ 80 (111)
T d1kjqa2 18 GSGELGKEVAIECQRLGVEVIAVDRYADAPAMHV-------------AHRSHVINMLDGDALRRVVELEKPHYIVP 80 (111)
T ss_dssp SCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-------------SSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred eCCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc-------------CCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence 5799999999999999999999999877632221 23678899999999999887567899953
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.35 E-value=0.00013 Score=49.09 Aligned_cols=91 Identities=16% Similarity=0.167 Sum_probs=61.3
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
+||+|.+|...+..+...|.+|+++++++++.. .+ .+.... .. .|..++ +.+.+.....++|+||
T Consensus 32 ~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~-~l--------~~~Ga~-~v--i~~~~~~~~~~v~~~t~~~g~d~v~ 99 (183)
T d1pqwa_ 32 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE-ML--------SRLGVE-YV--GDSRSVDFADEILELTDGYGVDVVL 99 (183)
T ss_dssp TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HH--------HTTCCS-EE--EETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred ECCCCCcccccchhhccccccceeeeccccccc-cc--------cccccc-cc--ccCCccCHHHHHHHHhCCCCEEEEE
Confidence 589999999999999899999999998765421 11 111112 22 234443 4445544456899999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
++.+. +..+..++.++...++|.++.
T Consensus 100 d~~g~--~~~~~~~~~l~~~G~~v~~G~ 125 (183)
T d1pqwa_ 100 NSLAG--EAIQRGVQILAPGGRFIELGK 125 (183)
T ss_dssp ECCCT--HHHHHHHHTEEEEEEEEECSC
T ss_pred ecccc--hHHHHHHHHhcCCCEEEEEcc
Confidence 99983 456677787773357887653
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.31 E-value=0.00038 Score=46.65 Aligned_cols=93 Identities=16% Similarity=0.109 Sum_probs=59.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+||+|.||+..++-+...|.+|++.++++++... ..+.... ..+..+-.+ ++........++|+||++.
T Consensus 38 ~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~---------~~~lGa~-~vi~~~~~~-~~~~~~~~~~gvD~vid~v 106 (176)
T d1xa0a2 38 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY---------LRVLGAK-EVLAREDVM-AERIRPLDKQRWAAAVDPV 106 (176)
T ss_dssp SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH---------HHHTTCS-EEEECC----------CCSCCEEEEEECS
T ss_pred EeccchHHHHHHHHHHHcCCceEEecCchHHHHH---------HHhcccc-eeeecchhH-HHHHHHhhccCcCEEEEcC
Confidence 5899999999999999999999999999887421 1111122 222222111 2233344445899999998
Q ss_pred CCCccchHHHHHhCCCCCcEEEEecc
Q 029198 81 GREADEVEPILDALPNLEQFIYCSSA 106 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~v~~Ss~ 106 (197)
+. ......++.++.-.+++.++..
T Consensus 107 gg--~~~~~~l~~l~~~Griv~~G~~ 130 (176)
T d1xa0a2 107 GG--RTLATVLSRMRYGGAVAVSGLT 130 (176)
T ss_dssp TT--TTHHHHHHTEEEEEEEEECSCC
T ss_pred Cc--hhHHHHHHHhCCCceEEEeecc
Confidence 74 4677888888844588876653
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.28 E-value=5.3e-05 Score=49.27 Aligned_cols=85 Identities=14% Similarity=0.090 Sum_probs=46.9
Q ss_pred CCcccchHHHHHHHHHHCCC---eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
+||||++|+.+++.|.+++| ++..++.+...... + ....+.......+ ...+. ++|++|
T Consensus 8 vGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~-i--------~~~~~~~~~~~~~-------~~~~~--~~d~vf 69 (144)
T d2hjsa1 8 VGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR-M--------GFAESSLRVGDVD-------SFDFS--SVGLAF 69 (144)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE-E--------EETTEEEECEEGG-------GCCGG--GCSEEE
T ss_pred ECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcc-e--------eeccccchhccch-------hhhhc--cceEEE
Confidence 49999999999999986653 77777655444211 0 0011111111111 11233 789998
Q ss_pred eccCCCccchHHHHHhCC-CCCcEEEEec
Q 029198 78 DINGREADEVEPILDALP-NLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss 105 (197)
.++.. .....+...+. ...++|-.|+
T Consensus 70 ~a~p~--~~s~~~~~~~~~~g~~VID~Ss 96 (144)
T d2hjsa1 70 FAAAA--EVSRAHAERARAAGCSVIDLSG 96 (144)
T ss_dssp ECSCH--HHHHHHHHHHHHTTCEEEETTC
T ss_pred ecCCc--chhhhhccccccCCceEEeech
Confidence 77643 23344444444 4456776665
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.26 E-value=0.00038 Score=45.04 Aligned_cols=72 Identities=25% Similarity=0.297 Sum_probs=44.5
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
+||+|.+|++++..|..+| .++++++.++.+... .++... ........-+ ...+..+.++ +.|+|+.
T Consensus 6 iGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a-------~Dl~~~-~~~~~~~~~~-~~~~~~~~~~--~aDivVi 74 (144)
T d1mlda1 6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA-------ADLSHI-ETRATVKGYL-GPEQLPDCLK--GCDVVVI 74 (144)
T ss_dssp ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH-------HHHTTS-SSSCEEEEEE-SGGGHHHHHT--TCSEEEE
T ss_pred ECCCChHHHHHHHHHHhCCccceEEEEeccccchhh-------HHHhhh-hhhcCCCeEE-cCCChHHHhC--CCCEEEE
Confidence 4889999999999999888 489999976433211 011111 1111111112 2344556666 9999999
Q ss_pred ccCCC
Q 029198 79 INGRE 83 (197)
Q Consensus 79 ~a~~~ 83 (197)
++|..
T Consensus 75 tag~~ 79 (144)
T d1mlda1 75 PAGVP 79 (144)
T ss_dssp CCSCC
T ss_pred CCCcC
Confidence 99863
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.17 E-value=0.0017 Score=42.06 Aligned_cols=84 Identities=12% Similarity=0.133 Sum_probs=49.9
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHH-hhhhccCc-cEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK-SSLSAKGF-DVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~-~~~~~~~~-d~vi~ 78 (197)
+||.|.+|.++++.|.+.||+|.+.+|++...... ........+...++.....+. +....... ..+++
T Consensus 15 IGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~---------~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD 85 (152)
T d2pv7a2 15 VGGYGKLGGLFARYLRASGYPISILDREDWAVAES---------ILANADVVIVSVPINLTLETIERLKPYLTENMLLAD 85 (152)
T ss_dssp ETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHH---------HHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEE
T ss_pred EcCCCHHHHHHHHHHHHcCCCcEecccccccccch---------hhhhccccccccchhhheeeeecccccccCCceEEE
Confidence 36799999999999999999999999987653211 111234555555555433332 33322223 36667
Q ss_pred ccCCCccchHHHHHh
Q 029198 79 INGREADEVEPILDA 93 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~ 93 (197)
+++....-.+.+.+.
T Consensus 86 ~~Svk~~~~~~~~~~ 100 (152)
T d2pv7a2 86 LTSVKREPLAKMLEV 100 (152)
T ss_dssp CCSCCHHHHHHHHHH
T ss_pred ecccCHHHHHHHHHH
Confidence 766543334444443
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.12 E-value=0.00065 Score=45.17 Aligned_cols=87 Identities=16% Similarity=0.213 Sum_probs=55.7
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+||+|.+|...+..+...|.+|+++++++++.. ...+.... .. .|..+. ..+.-...++|+||++.
T Consensus 34 ~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~---------~~~~lGa~-~~--i~~~~~--~~~~~~~~g~D~v~d~~ 99 (171)
T d1iz0a2 34 QAAAGALGTAAVQVARAMGLRVLAAASRPEKLA---------LPLALGAE-EA--ATYAEV--PERAKAWGGLDLVLEVR 99 (171)
T ss_dssp SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH---------HHHHTTCS-EE--EEGGGH--HHHHHHTTSEEEEEECS
T ss_pred Eeccccchhhhhhhhcccccccccccccccccc---------cccccccc-ee--eehhhh--hhhhhcccccccccccc
Confidence 589999999999999999999999999865522 11111111 11 233332 23333345899999988
Q ss_pred CCCccchHHHHHhCCCCCcEEEEe
Q 029198 81 GREADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
|. .....++.++...+++.++
T Consensus 100 G~---~~~~~~~~l~~~G~~v~~G 120 (171)
T d1iz0a2 100 GK---EVEESLGLLAHGGRLVYIG 120 (171)
T ss_dssp CT---THHHHHTTEEEEEEEEEC-
T ss_pred ch---hHHHHHHHHhcCCcEEEEe
Confidence 73 4566677776335777654
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.11 E-value=6.9e-05 Score=50.75 Aligned_cols=32 Identities=28% Similarity=0.397 Sum_probs=29.1
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
+||+|.+|++|++.|++.||+|++.+|++++.
T Consensus 6 igGaG~iG~alA~~la~~G~~V~l~~R~~e~~ 37 (212)
T d1jaya_ 6 LGGTGNLGKGLALRLATLGHEIVVGSRREEKA 37 (212)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEEESSHHHH
T ss_pred EeCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 48889999999999999999999999987653
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.07 E-value=0.00021 Score=47.70 Aligned_cols=90 Identities=11% Similarity=0.108 Sum_probs=60.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHH---HHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~l~~~~~~~~~d~vi 77 (197)
+||+|.+|...+..+...|.+|+++++++++.. . ..+. .--.+ .|..+.+ .+.+.....++|+||
T Consensus 35 ~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~-~--------~~~~-Ga~~v--i~~~~~~~~~~i~~~t~~~g~d~v~ 102 (174)
T d1yb5a2 35 HGASGGVGLAACQIARAYGLKILGTAGTEEGQK-I--------VLQN-GAHEV--FNHREVNYIDKIKKYVGEKGIDIII 102 (174)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-H--------HHHT-TCSEE--EETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred EeccccccccccccccccCcccccccccccccc-c--------cccc-Ccccc--cccccccHHHHhhhhhccCCceEEe
Confidence 488999999999999999999999998765421 1 1111 11122 3555544 334444455799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEe
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
++.+. ......++.++...+++.++
T Consensus 103 d~~g~--~~~~~~~~~l~~~G~iv~~G 127 (174)
T d1yb5a2 103 EMLAN--VNLSKDLSLLSHGGRVIVVG 127 (174)
T ss_dssp ESCHH--HHHHHHHHHEEEEEEEEECC
T ss_pred ecccH--HHHHHHHhccCCCCEEEEEe
Confidence 99873 45667778777445777765
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.88 E-value=0.00016 Score=48.57 Aligned_cols=95 Identities=13% Similarity=0.037 Sum_probs=53.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|+|.+|..++..|.+.||+|.+++|+++.......... .....+.............++.++++ .+|+||-+.
T Consensus 8 GaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~e~~~--~aD~iii~v-- 80 (184)
T d1bg6a2 8 GLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGA---IIAEGPGLAGTAHPDLLTSDIGLAVK--DADVILIVV-- 80 (184)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTS---EEEESSSCCEEECCSEEESCHHHHHT--TCSEEEECS--
T ss_pred CccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCC---CchhhhhhhhhhhhhhhhhhhHhHhc--CCCEEEEEE--
Confidence 46999999999999999999999998654321100000 00000111111111111223456666 899998764
Q ss_pred CccchHHHHHhCC---CCCcEEEEe
Q 029198 83 EADEVEPILDALP---NLEQFIYCS 104 (197)
Q Consensus 83 ~~~~~~~ll~~~~---~~~~~v~~S 104 (197)
.....+.+++.++ ....+|..+
T Consensus 81 ~~~~~~~~~~~i~~~l~~~~~iv~~ 105 (184)
T d1bg6a2 81 PAIHHASIAANIASYISEGQLIILN 105 (184)
T ss_dssp CGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred chhHHHHHHHHhhhccCCCCEEEEe
Confidence 3455667766655 334455444
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.87 E-value=0.0028 Score=41.34 Aligned_cols=87 Identities=20% Similarity=0.198 Sum_probs=51.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|+|.+|+.++..|.+.|++|.+++|.+......... ..............+.+.+ . .+|+||.+.-.
T Consensus 7 GaG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~----~--~~D~iii~vka 73 (167)
T d1ks9a2 7 GCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLV-------ETDGSIFNESLTANDPDFL----A--TSDLLLVTLKA 73 (167)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEE-------CTTSCEEEEEEEESCHHHH----H--TCSEEEECSCG
T ss_pred CcCHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccc-------cCCccccccccccchhhhh----c--ccceEEEeecc
Confidence 349999999999999999999999988764321110 0011111111122233333 3 89999976533
Q ss_pred CccchHHHHHhCC----CCCcEEEEe
Q 029198 83 EADEVEPILDALP----NLEQFIYCS 104 (197)
Q Consensus 83 ~~~~~~~ll~~~~----~~~~~v~~S 104 (197)
..++.+++.+. ....++.+.
T Consensus 74 --~~~~~~~~~l~~~~~~~~~Iv~~q 97 (167)
T d1ks9a2 74 --WQVSDAVKSLASTLPVTTPILLIH 97 (167)
T ss_dssp --GGHHHHHHHHHTTSCTTSCEEEEC
T ss_pred --cchHHHHHhhccccCcccEEeecc
Confidence 45566555544 234455444
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=96.86 E-value=0.00073 Score=45.09 Aligned_cols=91 Identities=16% Similarity=0.121 Sum_probs=60.8
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH---HHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~~d~vi 77 (197)
+||+|.+|...+..+...|.+|+++++++++.+. ..+. ..-+. .|..++ +.+.++-...++|+|+
T Consensus 35 ~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~---------~~~l-Ga~~v--i~~~~~d~~~~v~~~t~g~g~d~v~ 102 (179)
T d1qora2 35 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS---------ALKA-GAWQV--INYREEDLVERLKEITGGKKVRVVY 102 (179)
T ss_dssp SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH---------HHHH-TCSEE--EETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred EccccccchHHHHHHHHhCCeEeecccchHHHHH---------HHhc-CCeEE--EECCCCCHHHHHHHHhCCCCeEEEE
Confidence 5899999999999999999999999999876321 1111 21222 255554 3444444556899999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
++.+. ......++.++...+++..+.
T Consensus 103 d~~g~--~~~~~~~~~l~~~G~~v~~g~ 128 (179)
T d1qora2 103 DSVGR--DTWERSLDCLQRRGLMVSFGN 128 (179)
T ss_dssp ECSCG--GGHHHHHHTEEEEEEEEECCC
T ss_pred eCccH--HHHHHHHHHHhcCCeeeeccc
Confidence 99874 456667777773346665443
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.82 E-value=0.0011 Score=44.17 Aligned_cols=90 Identities=17% Similarity=0.110 Sum_probs=53.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|..+++.|++.||+|++.+|++++...... ......... -....+++..... .+|.++-+...
T Consensus 9 GlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~---------~~~~~~~~~-~a~~~~~~~~~~~--~~~~ii~~~~~ 76 (176)
T d2pgda2 9 GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA---------NEAKGTKVL-GAHSLEEMVSKLK--KPRRIILLVKA 76 (176)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH---------TTTTTSSCE-ECSSHHHHHHHBC--SSCEEEECSCT
T ss_pred eEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH---------hcccccccc-chhhhhhhhhhhc--ccceEEEecCc
Confidence 57999999999999999999999999876432110 000000000 1235566666666 77888766533
Q ss_pred Cccch----HHHHHhCCCCCcEEEEec
Q 029198 83 EADEV----EPILDALPNLEQFIYCSS 105 (197)
Q Consensus 83 ~~~~~----~~ll~~~~~~~~~v~~Ss 105 (197)
. ..+ ..++..++.-+.+|.+||
T Consensus 77 ~-~~v~~v~~~l~~~~~~g~iiid~sT 102 (176)
T d2pgda2 77 G-QAVDNFIEKLVPLLDIGDIIIDGGN 102 (176)
T ss_dssp T-HHHHHHHHHHHHHCCTTCEEEECSC
T ss_pred h-HHHHHHHHHHHhccccCcEEEecCc
Confidence 2 222 234444443345666665
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.74 E-value=0.002 Score=41.64 Aligned_cols=86 Identities=21% Similarity=0.300 Sum_probs=46.8
Q ss_pred CCcccchHHHHHHHHHHCC----CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEE
Q 029198 1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~v 76 (197)
+||||++|+.+++.|++.. .++..++.+........ ..... ....+..+.+. ++ ++|+|
T Consensus 6 iGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~----------~~~~~-~~~~~~~~~~~----~~--~~Dvv 68 (147)
T d1mb4a1 6 VGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPN----------FGKDA-GMLHDAFDIES----LK--QLDAV 68 (147)
T ss_dssp ESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCC----------SSSCC-CBCEETTCHHH----HT--TCSEE
T ss_pred ECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccc----------cCCcc-eeeecccchhh----hc--cccEE
Confidence 5999999999999988753 36666655433321110 01111 11112333332 34 89999
Q ss_pred EeccCCCccchHHHHHhCC--CCC-cEEEEec
Q 029198 77 YDINGREADEVEPILDALP--NLE-QFIYCSS 105 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~--~~~-~~v~~Ss 105 (197)
|.+... .-.+.+...+. +.+ .+|=.|+
T Consensus 69 F~alp~--~~s~~~~~~l~~~g~~~~VIDlSs 98 (147)
T d1mb4a1 69 ITCQGG--SYTEKVYPALRQAGWKGYWIDAAS 98 (147)
T ss_dssp EECSCH--HHHHHHHHHHHHTTCCSEEEESSS
T ss_pred EEecCc--hHHHHHhHHHHHcCCceEEEeCCc
Confidence 987743 33445555544 443 3555555
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.68 E-value=0.00088 Score=43.55 Aligned_cols=71 Identities=15% Similarity=0.201 Sum_probs=53.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
|.|-+|..+++.|.+.|++|++++..++....... .....++.++.+|..+++.++++--+ .+|.||-+..
T Consensus 10 G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~-------~~~~~~~~vi~Gd~~d~~~L~~a~i~-~a~~vi~~~~ 80 (153)
T d1id1a_ 10 GHSILAINTILQLNQRGQNVTVISNLPEDDIKQLE-------QRLGDNADVIPGDSNDSSVLKKAGID-RCRAILALSD 80 (153)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-------HHHCTTCEEEESCTTSHHHHHHHTTT-TCSEEEECSS
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHH-------HhhcCCcEEEEccCcchHHHHHhccc-cCCEEEEccc
Confidence 56899999999999999999999987654211100 11125789999999999998877542 7899987764
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.65 E-value=0.00064 Score=44.71 Aligned_cols=30 Identities=27% Similarity=0.410 Sum_probs=27.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|.|.+|..+++.|++.||+|++.+|++++.
T Consensus 7 GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~ 36 (161)
T d1vpda2 7 GLGIMGKPMSKNLLKAGYSLVVSDRNPEAI 36 (161)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred ehhHHHHHHHHHHHHCCCeEEEEeCCcchh
Confidence 679999999999999999999999987653
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.56 E-value=0.0012 Score=43.42 Aligned_cols=93 Identities=11% Similarity=0.060 Sum_probs=54.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCC--CCchhhhhccCceEEEeecCCCHHHHHhhhhc-------c-C
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K-G 72 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-------~-~ 72 (197)
|.|.+|..+++.|+++||+|.+.+|++.+....... .......+......++..-+.+...++.++.. . .
T Consensus 8 GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~~~~l~~ 87 (162)
T d3cuma2 8 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP 87 (162)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCHHHHSCT
T ss_pred EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccccccCCC
Confidence 679999999999999999999999986653211110 00011112222333444444555555544321 1 2
Q ss_pred ccEEEeccCCCccchHHHHHhCC
Q 029198 73 FDVVYDINGREADEVEPILDALP 95 (197)
Q Consensus 73 ~d~vi~~a~~~~~~~~~ll~~~~ 95 (197)
=++|+++........+.+.+.++
T Consensus 88 g~iiid~st~~p~~~~~~~~~~~ 110 (162)
T d3cuma2 88 GTLVLECSTIAPTSARKIHAAAR 110 (162)
T ss_dssp TCEEEECSCCCHHHHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHH
Confidence 35677777766666666666665
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.54 E-value=0.0015 Score=42.91 Aligned_cols=29 Identities=28% Similarity=0.405 Sum_probs=26.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|.+|+.+++.|.+.|++|++++|+++.
T Consensus 7 G~G~mG~~lA~~l~~~g~~V~~~d~~~~~ 35 (165)
T d2f1ka2 7 GLGLIGASLAGDLRRRGHYLIGVSRQQST 35 (165)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred eecHHHHHHHHHHHHCCCEEEEEECCchH
Confidence 56999999999999999999999998654
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=96.44 E-value=0.0056 Score=42.31 Aligned_cols=63 Identities=10% Similarity=0.066 Sum_probs=44.8
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHH----hhhhccCccEEEe
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK----SSLSAKGFDVVYD 78 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~----~~~~~~~~d~vi~ 78 (197)
.||..|.+|++++..+|++|+.+.-...... ...+..+.. ...+++. +.++ .+|++|+
T Consensus 30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~--------------p~~~~~~~~--~t~~~m~~~~~~~~~--~~D~~i~ 91 (223)
T d1u7za_ 30 SSGKMGFAIAAAAARRGANVTLVSGPVSLPT--------------PPFVKRVDV--MTALEMEAAVNASVQ--QQNIFIG 91 (223)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEECSCCCCC--------------CTTEEEEEC--CSHHHHHHHHHHHGG--GCSEEEE
T ss_pred CcHHHHHHHHHHHHHcCCchhhhhcccccCc--------------cccccccee--hhhHHHHHHHHhhhc--cceeEee
Confidence 5899999999999999999999988654311 124444443 3444343 3344 8999999
Q ss_pred ccCCC
Q 029198 79 INGRE 83 (197)
Q Consensus 79 ~a~~~ 83 (197)
+|+..
T Consensus 92 aAAvs 96 (223)
T d1u7za_ 92 CAAVA 96 (223)
T ss_dssp CCBCC
T ss_pred eechh
Confidence 98874
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=96.38 E-value=0.0056 Score=40.90 Aligned_cols=80 Identities=18% Similarity=0.101 Sum_probs=54.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.||+.+++.|..-|.+|++.+|.+...... -.+++.+++. .+|+|+.+.-.
T Consensus 49 G~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~~------------------------~~~~l~ell~--~sDiv~~~~pl 102 (181)
T d1qp8a1 49 GLGEIGTRVGKILAALGAQVRGFSRTPKEGPWR------------------------FTNSLEEALR--EARAAVCALPL 102 (181)
T ss_dssp SCSTHHHHHHHHHHHTTCEEEEECSSCCCSSSC------------------------CBSCSHHHHT--TCSEEEECCCC
T ss_pred ccccccccceeeeecccccccccccccccccee------------------------eeechhhhhh--ccchhhccccc
Confidence 579999999999999999999999876542110 0113556777 88888866544
Q ss_pred Cccc----hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EADE----VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~~~----~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+... ....++.|+....+|++|-..+
T Consensus 103 ~~~t~~li~~~~l~~mk~~ailIN~~RG~i 132 (181)
T d1qp8a1 103 NKHTRGLVKYQHLALMAEDAVFVNVGRAEV 132 (181)
T ss_dssp STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred ccccccccccceeeeccccceEEecccccc
Confidence 4221 2456666665557777775544
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.26 E-value=0.00058 Score=45.28 Aligned_cols=89 Identities=17% Similarity=0.222 Sum_probs=56.2
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHh---hhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS---SLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~---~~~~~~~d~vi 77 (197)
+||+|.||...++.....|.+|+++++++++.. .+.+...... + |.. +...+ .....++|.|+
T Consensus 30 ~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~---------~~~~lGad~v-i--~~~--~~~~~~~~~~~~~gvd~vi 95 (167)
T d1tt7a2 30 TGATGGVGGIAVSMLNKRGYDVVASTGNREAAD---------YLKQLGASEV-I--SRE--DVYDGTLKALSKQQWQGAV 95 (167)
T ss_dssp ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH---------HHHHHTCSEE-E--EHH--HHCSSCCCSSCCCCEEEEE
T ss_pred eCCcchHHHHHHHHHHHcCCceEEEecCHHHHH---------HHHhhcccce-E--ecc--chhchhhhcccCCCceEEE
Confidence 489999999999998888999999999987732 1122222222 2 111 11111 12234799999
Q ss_pred eccCCCccchHHHHHhCCCCCcEEEEec
Q 029198 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
++.+- ......++.++.-.+++.++.
T Consensus 96 d~vgg--~~~~~~~~~l~~~G~iv~~G~ 121 (167)
T d1tt7a2 96 DPVGG--KQLASLLSKIQYGGSVAVSGL 121 (167)
T ss_dssp ESCCT--HHHHHHHTTEEEEEEEEECCC
T ss_pred ecCcH--HHHHHHHHHhccCceEEEeec
Confidence 98764 355667777763346665553
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.24 E-value=0.0011 Score=44.35 Aligned_cols=90 Identities=17% Similarity=0.170 Sum_probs=58.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
+||+|.+|...++.+...|.+|+++++++++... +.+. ..-..+ |..+.+. .+.+.+...|.++++.
T Consensus 38 ~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~---------~~~l-Gad~vi--~~~~~~~-~~~l~~~~~~~vvD~V 104 (177)
T d1o89a2 38 TGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY---------LKSL-GASRVL--PRDEFAE-SRPLEKQVWAGAIDTV 104 (177)
T ss_dssp SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH---------HHHH-TEEEEE--EGGGSSS-CCSSCCCCEEEEEESS
T ss_pred EEccccchHHHHHHHHHcCCCeEEEecchhHHHH---------HHhh-cccccc--ccccHHH-HHHHHhhcCCeeEEEc
Confidence 5899999999999999999999999998777321 1111 112222 2222222 2334445689999987
Q ss_pred CCCccchHHHHHhCCCCCcEEEEec
Q 029198 81 GREADEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~v~~Ss 105 (197)
+. ......++.++...+++.++.
T Consensus 105 gg--~~~~~~l~~l~~~Griv~~G~ 127 (177)
T d1o89a2 105 GD--KVLAKVLAQMNYGGCVAACGL 127 (177)
T ss_dssp CH--HHHHHHHHTEEEEEEEEECCC
T ss_pred ch--HHHHHHHHHhccccceEeecc
Confidence 64 346667777774457776654
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=96.23 E-value=0.012 Score=38.57 Aligned_cols=92 Identities=11% Similarity=0.079 Sum_probs=58.7
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEe-ecCCCHHHHHhhhh---ccCccEEEe
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK-GDRKDYDFVKSSLS---AKGFDVVYD 78 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~l~~~~~---~~~~d~vi~ 78 (197)
|+|.+|...+..+...|.+|+++++++++.+. ..+......+.. ..-.+.....+.+. ..++|+||.
T Consensus 34 G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~---------a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid 104 (170)
T d1e3ja2 34 GAGPIGLVSVLAAKAYGAFVVCTARSPRRLEV---------AKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTID 104 (170)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred cccccchhhHhhHhhhcccccccchHHHHHHH---------HHHcCCcEEEeccccccccchhhhhhhcccccCCceeee
Confidence 47899999999998899999999998776321 111122222222 22234444444433 247999999
Q ss_pred ccCCCccchHHHHHhCCCCCcEEEEe
Q 029198 79 INGREADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
+.+.. ......++.++...+++.++
T Consensus 105 ~~g~~-~~~~~a~~~~~~~G~iv~~G 129 (170)
T d1e3ja2 105 CSGNE-KCITIGINITRTGGTLMLVG 129 (170)
T ss_dssp CSCCH-HHHHHHHHHSCTTCEEEECS
T ss_pred cCCCh-HHHHHHHHHHhcCCceEEEe
Confidence 99752 44567788888446777665
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=96.15 E-value=0.0013 Score=42.49 Aligned_cols=68 Identities=13% Similarity=0.195 Sum_probs=43.4
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhh---hhccCceEEEeecCCCHHHHHhhhhccCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEF---AEFSSKILHLKGDRKDYDFVKSSLSAKGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~ 75 (197)
+| +|++|+.++..|+.+| .+|+++++++....... .++ ...........+|+. .+. ++|+
T Consensus 11 IG-aG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a-----~Dl~~a~~~~~~~~~~~~d~~-------~~~--~adi 75 (146)
T d1ez4a1 11 VG-DGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDA-----LDLEDAQAFTAPKKIYSGEYS-------DCK--DADL 75 (146)
T ss_dssp EC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHH-----HHHHGGGGGSCCCEEEECCGG-------GGT--TCSE
T ss_pred EC-CCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHH-----HHHhccccccCCceEeeccHH-------Hhc--cccE
Confidence 36 5999999999999988 69999999764321000 011 111233445555542 233 8999
Q ss_pred EEeccCCC
Q 029198 76 VYDINGRE 83 (197)
Q Consensus 76 vi~~a~~~ 83 (197)
|+.+++..
T Consensus 76 vvitag~~ 83 (146)
T d1ez4a1 76 VVITAGAP 83 (146)
T ss_dssp EEECCCC-
T ss_pred EEEecccc
Confidence 99998874
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.15 E-value=0.014 Score=38.28 Aligned_cols=91 Identities=13% Similarity=0.090 Sum_probs=60.0
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhh---ccCccEEEe
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---AKGFDVVYD 78 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~---~~~~d~vi~ 78 (197)
|+|.+|...+..+...|. +|+++++++.+.. +.....--..+..+-.+..+..+.++ ..++|+||.
T Consensus 34 G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~----------~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid 103 (171)
T d1pl8a2 34 GAGPIGMVTLLVAKAMGAAQVVVTDLSATRLS----------KAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIE 103 (171)
T ss_dssp CCSHHHHHHHHHHHHTTCSEEEEEESCHHHHH----------HHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCCccHHHHHHHHHHcCCceEEeccCCHHHHH----------HHHHhCCcccccccccccccccccccccCCCCceEEEe
Confidence 459999999999999997 7999998876532 11111222334444455555544443 247999999
Q ss_pred ccCCCccchHHHHHhCCCCCcEEEEe
Q 029198 79 INGREADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
+.|. ....+..++.++.-.+++.++
T Consensus 104 ~~G~-~~~~~~a~~~~~~gG~iv~~G 128 (171)
T d1pl8a2 104 CTGA-EASIQAGIYATRSGGTLVLVG 128 (171)
T ss_dssp CSCC-HHHHHHHHHHSCTTCEEEECS
T ss_pred ccCC-chhHHHHHHHhcCCCEEEEEe
Confidence 9985 245667788888446777766
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=96.12 E-value=0.0043 Score=41.66 Aligned_cols=96 Identities=13% Similarity=0.199 Sum_probs=59.0
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEee---cCCCH-HHHHhhhh--ccCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG---DRKDY-DFVKSSLS--AKGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~~-~~l~~~~~--~~~~d 74 (197)
+||+|.+|...+......|.+|++++|+++..+... ..+.+.... ..+.. |..+. +.+.+... ..++|
T Consensus 36 ~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~-----~~~~~lGad-~vi~~~~~~~~~~~~~v~~~~~~~g~~vd 109 (189)
T d1gu7a2 36 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVV-----ASLKELGAT-QVITEDQNNSREFGPTIKEWIKQSGGEAK 109 (189)
T ss_dssp SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHH-----HHHHHHTCS-EEEEHHHHHCGGGHHHHHHHHHHHTCCEE
T ss_pred eCCCchHHHHHHHHHhhcCCeEEEEEecccccchHH-----hhhhhcccc-EEEeccccchhHHHHHHHHHHhhccCCce
Confidence 489999999999999889999999999876632111 011122222 22222 22222 22333322 23699
Q ss_pred EEEeccCCCccchHHHHHhCCCCCcEEEEe
Q 029198 75 VVYDINGREADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 75 ~vi~~a~~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
+++++.+. +.....++.++...++|.++
T Consensus 110 vv~D~vg~--~~~~~~~~~l~~~G~~v~~G 137 (189)
T d1gu7a2 110 LALNCVGG--KSSTGIARKLNNNGLMLTYG 137 (189)
T ss_dssp EEEESSCH--HHHHHHHHTSCTTCEEEECC
T ss_pred EEEECCCc--chhhhhhhhhcCCcEEEEEC
Confidence 99999873 45677888888446777554
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.10 E-value=0.0034 Score=42.16 Aligned_cols=97 Identities=12% Similarity=0.147 Sum_probs=54.4
Q ss_pred CCcccchHHHHHHHHHHCCCeE-EEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCH-HHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQV-TLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~l~~~~~~~~~d~vi~ 78 (197)
+||+|.||+..++.+...|.++ ++.+.++++... +......-..+...-.+. +.++++. ..++|+||+
T Consensus 37 ~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~---------l~~~~gad~vi~~~~~~~~~~~~~~~-~~GvDvv~D 106 (187)
T d1vj1a2 37 SGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLF---------LTSELGFDAAVNYKTGNVAEQLREAC-PGGVDVYFD 106 (187)
T ss_dssp SSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHH---------HHHHSCCSEEEETTSSCHHHHHHHHC-TTCEEEEEE
T ss_pred ECCCchhhHHHHHHHHHcCCcceecccchHHHHhh---------hhhcccceEEeeccchhHHHHHHHHh-ccCceEEEe
Confidence 5899999999999998889754 445555443211 111112223332222233 3344443 358999999
Q ss_pred ccCCCccchHHHHHhCCCCCcEEEEecceec
Q 029198 79 INGREADEVEPILDALPNLEQFIYCSSAGVY 109 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~v~~Ss~~vy 109 (197)
+.|. ......++.++...+++.++.+.-|
T Consensus 107 ~vGg--~~~~~~~~~l~~~G~iv~~G~~s~~ 135 (187)
T d1vj1a2 107 NVGG--DISNTVISQMNENSHIILCGQISQY 135 (187)
T ss_dssp SSCH--HHHHHHHTTEEEEEEEEEC------
T ss_pred cCCc--hhHHHHhhhccccccEEEecccccc
Confidence 9973 4566677777744578877655443
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.06 E-value=0.00078 Score=44.00 Aligned_cols=27 Identities=15% Similarity=0.358 Sum_probs=20.7
Q ss_pred CCcccchHHHHHHHHHHCCC---eEEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTR 27 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~---~V~~~~r 27 (197)
+||||++|..|++.|.+..+ ++..++.
T Consensus 7 vGATGyvG~eLirlL~~H~fp~~~l~~~~s 36 (154)
T d2gz1a1 7 VGATGAVGAQMIKMLEESTLPIDKIRYLAS 36 (154)
T ss_dssp ETTTSHHHHHHHHHHHTCCSCEEEEEEEEC
T ss_pred ECCCcHHHHHHHHHHHcCCCCceEEEEecc
Confidence 59999999999999987753 4544443
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.04 E-value=0.0079 Score=39.97 Aligned_cols=91 Identities=13% Similarity=0.156 Sum_probs=56.2
Q ss_pred CcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHH----HHhhhhccCccEE
Q 029198 2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF----VKSSLSAKGFDVV 76 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----l~~~~~~~~~d~v 76 (197)
|| |.+|...+..+...|. +|+++++++++.+. ..+... -..+...-.+..+ +.+.....++|+|
T Consensus 36 Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~---------a~~lGa-~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvv 104 (182)
T d1vj0a2 36 GA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKL---------AEEIGA-DLTLNRRETSVEERRKAIMDITHGRGADFI 104 (182)
T ss_dssp CC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHH---------HHHTTC-SEEEETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred CC-Cccchhheecccccccccccccccccccccc---------cccccc-eEEEeccccchHHHHHHHHHhhCCCCceEE
Confidence 54 8999999999999997 79999998766321 111111 1222222223222 2333334579999
Q ss_pred EeccCCCccchHHHHHhCCCCCcEEEEe
Q 029198 77 YDINGREADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
|.+.|.. ...+..++.++...+++.++
T Consensus 105 id~vG~~-~~~~~a~~~l~~~G~iv~~G 131 (182)
T d1vj0a2 105 LEATGDS-RALLEGSELLRRGGFYSVAG 131 (182)
T ss_dssp EECSSCT-THHHHHHHHEEEEEEEEECC
T ss_pred eecCCch-hHHHHHHHHhcCCCEEEEEe
Confidence 9998753 45677788888335777665
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.03 E-value=0.0012 Score=42.69 Aligned_cols=30 Identities=27% Similarity=0.412 Sum_probs=26.4
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKA 30 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~ 30 (197)
+||+|.+|+.++..|+.++ .++.++++++.
T Consensus 6 iGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~ 37 (145)
T d1hyea1 6 IGASGRVGSATALLLAKEPFMKDLVLIGREHS 37 (145)
T ss_dssp ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred ECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence 4889999999999999998 59999998753
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=95.98 E-value=0.0067 Score=40.45 Aligned_cols=76 Identities=14% Similarity=0.098 Sum_probs=53.3
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
|+|..|++++..|.+.|. +++++.|+++...+.... .+.....-.......++.+.+.+...+. .+|.|||+..
T Consensus 25 GaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~diiIN~Tp 99 (182)
T d1vi2a1 25 GAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAF---AQRVNENTDCVVTVTDLADQQAFAEALA--SADILTNGTK 99 (182)
T ss_dssp CCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHH---HHHHHHHSSCEEEEEETTCHHHHHHHHH--TCSEEEECSS
T ss_pred CCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHH---HHHHHhhcCcceEeeecccccchhhhhc--ccceeccccC
Confidence 568999999999999985 899999987764321100 0001112234456788999998888887 9999999975
Q ss_pred CC
Q 029198 82 RE 83 (197)
Q Consensus 82 ~~ 83 (197)
..
T Consensus 100 ~G 101 (182)
T d1vi2a1 100 VG 101 (182)
T ss_dssp TT
T ss_pred Cc
Confidence 43
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=95.96 E-value=0.0031 Score=35.88 Aligned_cols=31 Identities=26% Similarity=0.251 Sum_probs=28.5
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
+||+|.+|...+..+...|++|+++++++++
T Consensus 38 ~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k 68 (77)
T d1o8ca2 38 TGASGGVGSTAVALLHKLGYQVVAVSGREST 68 (77)
T ss_dssp SSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred EeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence 5999999999999998999999999998766
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=95.81 E-value=0.0022 Score=41.20 Aligned_cols=71 Identities=15% Similarity=0.142 Sum_probs=42.9
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEecCCCCccCCCCCCCchhhh---hccCceEEEeecCCCHHHHHhhhhccCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFA---EFSSKILHLKGDRKDYDFVKSSLSAKGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~ 75 (197)
+||+|.+|+.++..|..++. ++.+++....+... .. ...++. ..........+|+ ++ +. +.|+
T Consensus 6 iGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~--~g-~a~Dl~~~~~~~~~~~i~~~~~---~~----~~--~aDi 73 (142)
T d1o6za1 6 VGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDT--VG-QAADTNHGIAYDSNTRVRQGGY---ED----TA--GSDV 73 (142)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHH--HH-HHHHHHHHHTTTCCCEEEECCG---GG----GT--TCSE
T ss_pred ECCCCcHHHHHHHHHHhCCCCCEEEEEecCCccccc--ce-eecchhhcccccCCceEeeCCH---HH----hh--hcCE
Confidence 48899999999999999984 89999864322100 00 001111 1223344444443 22 33 9999
Q ss_pred EEeccCCC
Q 029198 76 VYDINGRE 83 (197)
Q Consensus 76 vi~~a~~~ 83 (197)
|+.+||..
T Consensus 74 VvitaG~~ 81 (142)
T d1o6za1 74 VVITAGIP 81 (142)
T ss_dssp EEECCCCC
T ss_pred EEEecccc
Confidence 99998864
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=95.77 E-value=0.005 Score=40.80 Aligned_cols=91 Identities=14% Similarity=0.059 Sum_probs=57.4
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEecc
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~~a 80 (197)
|+|.+|...+..+...|. +|+++++++++.. +.....-.+.+...-.+ .+.+.+.....++|+||.+.
T Consensus 35 GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~----------~a~~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~ 104 (174)
T d1jqba2 35 GIGAVGLMGIAGAKLRGAGRIIGVGSRPICVE----------AAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAG 104 (174)
T ss_dssp CCSHHHHHHHHHHHTTTCSCEEEECCCHHHHH----------HHHHHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEECS
T ss_pred cCCcchhhhhhhhhcccccccccccchhhhHH----------HHHhhCccccccccchhHHHHHHHHhhccCcceEEEcc
Confidence 359999999999988896 7999998766521 11111112233221122 34555555556799999999
Q ss_pred CCCccchHHHHHhCCCCCcEEEEe
Q 029198 81 GREADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
+.. ......++.++...+++.++
T Consensus 105 g~~-~~~~~a~~~~~~~G~iv~~G 127 (174)
T d1jqba2 105 GGS-ETLSQAVKMVKPGGIISNIN 127 (174)
T ss_dssp SCT-THHHHHHHHEEEEEEEEECC
T ss_pred CCH-HHHHHHHHHHhcCCEEEEEe
Confidence 853 44566777777445777655
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.76 E-value=0.011 Score=39.32 Aligned_cols=84 Identities=18% Similarity=0.161 Sum_probs=51.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc--cCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI--AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|+|..|.+++..|.+.|++|.+..|..+.. ...........+ .......++.-.+++.++++ ..|+|+.+.
T Consensus 7 GaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~--~ad~Ii~av 79 (180)
T d1txga2 7 GAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRL-----GVKLNGVEIFWPEQLEKCLE--NAEVVLLGV 79 (180)
T ss_dssp SCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTT-----TBCCCSEEEECGGGHHHHHT--TCSEEEECS
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhh-----cchhccccccccccHHHHHh--ccchhhccc
Confidence 579999999999999999999999854321 000000000000 01111122333556777787 899998654
Q ss_pred CCCccchHHHHHhCC
Q 029198 81 GREADEVEPILDALP 95 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~ 95 (197)
.....+.+++.+.
T Consensus 80 --ps~~~~~~~~~l~ 92 (180)
T d1txga2 80 --STDGVLPVMSRIL 92 (180)
T ss_dssp --CGGGHHHHHHHHT
T ss_pred --chhhhHHHHHhhc
Confidence 4567888887766
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=95.68 E-value=0.0011 Score=38.99 Aligned_cols=65 Identities=15% Similarity=0.062 Sum_probs=41.2
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
||+|.-| |++.|.++|++|.+.++.+....+.+. ..++.+..+ .+++. ++ ++|.||...+
T Consensus 10 gG~GMs~--LA~~L~~~G~~VsGSD~~~~~~t~~L~----------~~Gi~i~~g--h~~~~----i~--~~d~vV~SsA 69 (89)
T d1j6ua1 10 GGIGMSA--VALHEFSNGNDVYGSNIEETERTAYLR----------KLGIPIFVP--HSADN----WY--DPDLVIKTPA 69 (89)
T ss_dssp TSHHHHH--HHHHHHHTTCEEEEECSSCCHHHHHHH----------HTTCCEESS--CCTTS----CC--CCSEEEECTT
T ss_pred CHHHHHH--HHHHHHhCCCeEEEEeCCCChhHHHHH----------HCCCeEEee--ecccc----cC--CCCEEEEecC
Confidence 5555554 788999999999999998654322221 134655544 22222 23 7899998888
Q ss_pred CCccc
Q 029198 82 READE 86 (197)
Q Consensus 82 ~~~~~ 86 (197)
...+.
T Consensus 70 I~~~n 74 (89)
T d1j6ua1 70 VRDDN 74 (89)
T ss_dssp CCTTC
T ss_pred cCCCC
Confidence 75443
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=95.61 E-value=0.02 Score=37.33 Aligned_cols=86 Identities=14% Similarity=0.156 Sum_probs=57.6
Q ss_pred ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCCC
Q 029198 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE 83 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~~ 83 (197)
+|.+|...+..+...|.+++++++++++.. ...+.... . ..|..+.+......+ ++|++|.+.+..
T Consensus 39 aG~vG~~a~qlak~~Ga~~i~~~~~~~~~~---------~a~~lGad-~--~i~~~~~~~~~~~~~--~~D~vid~~g~~ 104 (168)
T d1uufa2 39 IGGLGHMGIKLAHAMGAHVVAFTTSEAKRE---------AAKALGAD-E--VVNSRNADEMAAHLK--SFDFILNTVAAP 104 (168)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESSGGGHH---------HHHHHTCS-E--EEETTCHHHHHTTTT--CEEEEEECCSSC
T ss_pred cchHHHHHHHHhhcccccchhhccchhHHH---------HHhccCCc-E--EEECchhhHHHHhcC--CCceeeeeeecc
Confidence 588999999888889999999998776521 11111111 2 246667766655555 899999998753
Q ss_pred ccchHHHHHhCCCCCcEEEEe
Q 029198 84 ADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 84 ~~~~~~ll~~~~~~~~~v~~S 104 (197)
......++.++.-.+++.++
T Consensus 105 -~~~~~~~~~l~~~G~iv~~G 124 (168)
T d1uufa2 105 -HNLDDFTTLLKRDGTMTLVG 124 (168)
T ss_dssp -CCHHHHHTTEEEEEEEEECC
T ss_pred -hhHHHHHHHHhcCCEEEEec
Confidence 44666677776335677655
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=95.52 E-value=0.01 Score=37.95 Aligned_cols=68 Identities=19% Similarity=0.320 Sum_probs=39.5
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhh---hccCceEEEeecCCCHHHHHhhhhccCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFA---EFSSKILHLKGDRKDYDFVKSSLSAKGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~ 75 (197)
+|+ |.+|+.++..|+.++ .++++++++++...... .++. ...+......+| . +.++ +.|+
T Consensus 7 IGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a-----~Dl~~~~~~~~~~~~~~~~---~----~~~~--~adi 71 (142)
T d1y6ja1 7 IGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEA-----MDINHGLPFMGQMSLYAGD---Y----SDVK--DCDV 71 (142)
T ss_dssp ECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHH-----HHHTTSCCCTTCEEEC--C---G----GGGT--TCSE
T ss_pred ECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceee-----eeeccCcccCCCeeEeeCc---H----HHhC--CCce
Confidence 465 999999999999997 49999999876532100 0111 111223332222 2 2344 8999
Q ss_pred EEeccCCC
Q 029198 76 VYDINGRE 83 (197)
Q Consensus 76 vi~~a~~~ 83 (197)
|+.+||..
T Consensus 72 vvitag~~ 79 (142)
T d1y6ja1 72 IVVTAGAN 79 (142)
T ss_dssp EEECCCC-
T ss_pred EEEecccc
Confidence 99998865
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=95.33 E-value=0.0073 Score=40.09 Aligned_cols=90 Identities=16% Similarity=0.127 Sum_probs=47.9
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCce-EEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
+||||++|..|++.|.+.- .++..+..+..... .+.+..+.. ........+.+ .+.+ ++|+|+.
T Consensus 7 vGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~---------~i~~~~p~~~~~~~~~~~~~~---~~~~--~~dvvf~ 72 (176)
T d1vkna1 7 IGATGYTGLELVRLLKNHPEAKITYLSSRTYAGK---------KLEEIFPSTLENSILSEFDPE---KVSK--NCDVLFT 72 (176)
T ss_dssp ESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTS---------BHHHHCGGGCCCCBCBCCCHH---HHHH--HCSEEEE
T ss_pred ECCCcHHHHHHHHHHHhCCCceEEEeeccccCCC---------cccccCchhhccccccccCHh---Hhcc--ccceEEE
Confidence 5999999999999998764 47777765433311 111111111 11111223333 3334 7899986
Q ss_pred ccCCCccchHHHHHhCCCCCcEEEEecce
Q 029198 79 INGREADEVEPILDALPNLEQFIYCSSAG 107 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~v~~Ss~~ 107 (197)
+.... ....+.... ...++|-.|+..
T Consensus 73 a~p~~--~s~~~~~~~-~~~~VIDlSadf 98 (176)
T d1vkna1 73 ALPAG--ASYDLVREL-KGVKIIDLGADF 98 (176)
T ss_dssp CCSTT--HHHHHHTTC-CSCEEEESSSTT
T ss_pred ccccH--HHHHHHHhh-ccceEEecCccc
Confidence 66432 223333333 334677777643
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=95.31 E-value=0.01 Score=40.07 Aligned_cols=29 Identities=24% Similarity=0.395 Sum_probs=25.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|.||+.+++.|..-|.+|++.++....
T Consensus 50 G~G~IG~~va~~l~~fg~~V~~~d~~~~~ 78 (197)
T d1j4aa1 50 GTGHIGQVFMQIMEGFGAKVITYDIFRNP 78 (197)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred cccccchhHHHhHhhhcccccccCccccc
Confidence 67999999999999999999999876543
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.22 E-value=0.0025 Score=42.02 Aligned_cols=88 Identities=11% Similarity=0.114 Sum_probs=52.9
Q ss_pred ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCCC
Q 029198 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE 83 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~~ 83 (197)
+|.+|...+..+...|.+|+++++++++.. ...+.... +.+.. ..+.+..+...+ .+|.++.+.+..
T Consensus 36 aG~vG~~a~q~ak~~G~~vi~~~~~~~k~~---------~a~~lGa~-~~i~~-~~~~~~~~~~~~--~~d~vi~~~~~~ 102 (168)
T d1piwa2 36 LGGIGSMGTLISKAMGAETYVISRSSRKRE---------DAMKMGAD-HYIAT-LEEGDWGEKYFD--TFDLIVVCASSL 102 (168)
T ss_dssp CSHHHHHHHHHHHHHTCEEEEEESSSTTHH---------HHHHHTCS-EEEEG-GGTSCHHHHSCS--CEEEEEECCSCS
T ss_pred CCCcchhHHHHhhhccccccccccchhHHH---------HhhccCCc-EEeec-cchHHHHHhhhc--ccceEEEEecCC
Confidence 499999998888888999999999877632 11111112 22211 123333444444 899999987654
Q ss_pred cc-chHHHHHhCCCCCcEEEEe
Q 029198 84 AD-EVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 84 ~~-~~~~ll~~~~~~~~~v~~S 104 (197)
.. .....++.++...+++.++
T Consensus 103 ~~~~~~~~~~~l~~~G~iv~~G 124 (168)
T d1piwa2 103 TDIDFNIMPKAMKVGGRIVSIS 124 (168)
T ss_dssp TTCCTTTGGGGEEEEEEEEECC
T ss_pred ccchHHHHHHHhhccceEEEec
Confidence 32 2345566666334676654
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=95.20 E-value=0.0072 Score=40.49 Aligned_cols=29 Identities=10% Similarity=0.138 Sum_probs=26.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|.+|..++..++..|++|++++++++.
T Consensus 11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~ 39 (186)
T d1wdka3 11 GAGIMGGGIAYQSASKGTPILMKDINEHG 39 (186)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred CcCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 45999999999999999999999998765
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=95.18 E-value=0.0033 Score=40.76 Aligned_cols=78 Identities=14% Similarity=0.072 Sum_probs=49.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|+|.+|+++++.|.+.|++|++.+|+.++... +.+.. ++.+. . +..++++ ..|+||-+.
T Consensus 7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~---------l~~~~-g~~~~----~---~~~~~~~--~~dvIilav-- 65 (152)
T d2ahra2 7 GVGKMASAIIKGLKQTPHELIISGSSLERSKE---------IAEQL-ALPYA----M---SHQDLID--QVDLVILGI-- 65 (152)
T ss_dssp CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHH---------HHHHH-TCCBC----S---SHHHHHH--TCSEEEECS--
T ss_pred eccHHHHHHHHHHHhCCCeEEEEcChHHhHHh---------hcccc-ceeee----c---hhhhhhh--ccceeeeec--
Confidence 68999999999999999999999998655321 11110 11111 1 2345555 889887554
Q ss_pred CccchHHHHHhCCCCCcEE
Q 029198 83 EADEVEPILDALPNLEQFI 101 (197)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~v 101 (197)
..+....+++.++..+.++
T Consensus 66 kp~~~~~vl~~l~~~~~ii 84 (152)
T d2ahra2 66 KPQLFETVLKPLHFKQPII 84 (152)
T ss_dssp CGGGHHHHHTTSCCCSCEE
T ss_pred chHhHHHHhhhcccceeEe
Confidence 3455667777666434444
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=95.17 E-value=0.008 Score=38.37 Aligned_cols=73 Identities=12% Similarity=0.033 Sum_probs=43.1
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~ 78 (197)
+|| |.+|+.++..|+..+ .++.+++.++........... ...........+... .+.+ .++ ++|+|+-
T Consensus 6 IGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~-~~~~~~~~~~~i~~~--~~~~----~~~--dadvvvi 75 (142)
T d1guza1 6 IGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMY-ESGPVGLFDTKVTGS--NDYA----DTA--NSDIVII 75 (142)
T ss_dssp ECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHH-TTHHHHTCCCEEEEE--SCGG----GGT--TCSEEEE
T ss_pred ECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhh-cccchhcccceEEec--CCHH----Hhc--CCeEEEE
Confidence 475 999999999999997 699999998765321100000 000011123333322 2222 344 8999999
Q ss_pred ccCCC
Q 029198 79 INGRE 83 (197)
Q Consensus 79 ~a~~~ 83 (197)
++|..
T Consensus 76 tag~~ 80 (142)
T d1guza1 76 TAGLP 80 (142)
T ss_dssp CCSCC
T ss_pred EEecC
Confidence 99864
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=95.14 E-value=0.012 Score=34.85 Aligned_cols=65 Identities=20% Similarity=0.274 Sum_probs=41.2
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
||+|. ++|++.|.++|++|.+.++......+. +. ..++.+..+.- ++ .++ ++|.||...+
T Consensus 17 gG~GM--s~LA~~L~~~G~~VsGSD~~~~~~~~~--------L~--~~Gi~v~~g~~--~~----~i~--~~d~vV~S~A 76 (96)
T d1p3da1 17 GGAGM--SGIAEILLNEGYQISGSDIADGVVTQR--------LA--QAGAKIYIGHA--EE----HIE--GASVVVVSSA 76 (96)
T ss_dssp TSTTH--HHHHHHHHHHTCEEEEEESCCSHHHHH--------HH--HTTCEEEESCC--GG----GGT--TCSEEEECTT
T ss_pred CHHHH--HHHHHHHHhCCCEEEEEeCCCChhhhH--------HH--HCCCeEEECCc--cc----cCC--CCCEEEECCC
Confidence 45555 567999999999999999975542211 11 13566555422 22 233 7899998888
Q ss_pred CCccc
Q 029198 82 READE 86 (197)
Q Consensus 82 ~~~~~ 86 (197)
.....
T Consensus 77 I~~~n 81 (96)
T d1p3da1 77 IKDDN 81 (96)
T ss_dssp SCTTC
T ss_pred cCCCC
Confidence 75443
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.14 E-value=0.0083 Score=38.49 Aligned_cols=29 Identities=24% Similarity=0.368 Sum_probs=23.3
Q ss_pred CCcccchHHHHHHHHHHC-C--CeEEEEecCC
Q 029198 1 MGGTRFIGVFLSRLLVKE-G--HQVTLFTRGK 29 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g--~~V~~~~r~~ 29 (197)
+|++|.||++++..|..+ + .++..++..+
T Consensus 6 iGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~ 37 (145)
T d2cmda1 6 LGAAGGIGQALALLLKTQLPSGSELSLYDIAP 37 (145)
T ss_dssp ETTTSHHHHHHHHHHHHHSCTTCEEEEECSST
T ss_pred EcCCChHHHHHHHHHHhCCCCCcEEEEecccc
Confidence 588999999999988643 3 7999998753
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.13 E-value=0.033 Score=34.70 Aligned_cols=26 Identities=19% Similarity=0.423 Sum_probs=22.4
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFT 26 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~ 26 (197)
.|++|.+|+.+...+.++|+++.+..
T Consensus 6 ~G~~GrMG~~i~~~~~~~~~~l~~~i 31 (128)
T d1vm6a3 6 VGYSGRMGQEIQKVFSEKGHELVLKV 31 (128)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ECCCCHHHHHHHHHHhcCCCeEEEEE
Confidence 48999999999999999999877653
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=94.90 E-value=0.075 Score=32.54 Aligned_cols=64 Identities=13% Similarity=0.038 Sum_probs=49.3
Q ss_pred chHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 6 ~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
|.+.+.++.|.+.|++++.+.-+++...+-.. -..-+..+.-..+.+.+++++.+||.|+-..|
T Consensus 25 y~~~~a~~aLk~~g~~~IliN~NPeTVstd~d------------~aD~lYfeplt~e~v~~Ii~~E~p~~ii~~~G 88 (121)
T d1a9xa4 25 YCCVHASLALREDGYETIMVNCNPETVSTDYD------------TSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYG 88 (121)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT------------SSSEEECCCCSHHHHHHHHHHHCCSEEECSSS
T ss_pred HHHHHHHHHHHhcCCeEEEEecChhhhhcChh------------hcCceEEccCCHHHHHHHHHHhCCCEEEeehh
Confidence 67889999999999999999999988654332 12333445557888999988889999986544
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=94.86 E-value=0.043 Score=34.03 Aligned_cols=65 Identities=17% Similarity=0.160 Sum_probs=50.3
Q ss_pred cchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 5 RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 5 G~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
-|.+.+.+++|.+.|++++.+.-+++...+... -..-+..+.-..+.+.+++++.+||.|+-..|
T Consensus 27 Dy~~~~a~~alke~g~~~iliN~NP~TVstd~d------------~aD~lYfePlt~e~v~~Ii~~E~pd~il~~~G 91 (127)
T d1a9xa3 27 DYSGAQACKALREEGYRVINVNSNPATIMTDPE------------MADATYIEPIHWEVVRKIIEKERPDAVLPTMG 91 (127)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG------------GSSEEECSCCCHHHHHHHHHHHCCSEEECSSS
T ss_pred HHHHHHHHHHHHHcCCeEEEecCchHhhhcChh------------hcceeeeecCCHHHHHHHHHHhCcCCeEEEee
Confidence 367889999999999999999999988654322 22334455667889999999889999986554
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=94.84 E-value=0.0091 Score=38.14 Aligned_cols=30 Identities=17% Similarity=0.320 Sum_probs=25.0
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~ 31 (197)
+|+ |.||+.++..|+..+ .++.+++.+++.
T Consensus 7 IGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~ 37 (142)
T d1uxja1 7 IGA-GFVGSTTAHWLAAKELGDIVLLDIVEGV 37 (142)
T ss_dssp ECC-SHHHHHHHHHHHHHTCSEEEEECSSSSH
T ss_pred ECC-CHHHHHHHHHHHhCCcceEEEEeecccc
Confidence 364 999999999998887 489999987664
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=94.80 E-value=0.029 Score=34.56 Aligned_cols=29 Identities=24% Similarity=0.268 Sum_probs=26.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|++|..++..|.+.|.+|+.+.+.+.-
T Consensus 37 GgG~iG~E~A~~l~~~g~~Vtli~~~~~~ 65 (121)
T d1d7ya2 37 GGGVIGLELAATARTAGVHVSLVETQPRL 65 (121)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CcchhHHHHHHHhhcccceEEEEeecccc
Confidence 67999999999999999999999998765
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=94.79 E-value=0.016 Score=37.86 Aligned_cols=93 Identities=13% Similarity=0.190 Sum_probs=55.1
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC-HHHHHhhhhccCccEEEe
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~~~~d~vi~ 78 (197)
+|++|.+|...+..+...| .+|+++++++++.. ...+. .--..+..+-.| .+.+.+......+|++|.
T Consensus 34 ~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~---------~~~~~-Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid 103 (170)
T d1jvba2 34 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE---------AAKRA-GADYVINASMQDPLAEIRRITESKGVDAVID 103 (170)
T ss_dssp ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHH---------HHHHH-TCSEEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred EeccccceeeeeecccccccccccccccchhhHH---------HHHHc-CCceeeccCCcCHHHHHHHHhhcccchhhhc
Confidence 4789999999999998888 48999998765521 11111 111233332223 233444433447999999
Q ss_pred ccCCCccchHHHHHhCCCCCcEEEEe
Q 029198 79 INGREADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
+++.. ......++.++.-.+++.++
T Consensus 104 ~~g~~-~~~~~a~~~l~~~G~iv~~G 128 (170)
T d1jvba2 104 LNNSE-KTLSVYPKALAKQGKYVMVG 128 (170)
T ss_dssp SCCCH-HHHTTGGGGEEEEEEEEECC
T ss_pred ccccc-hHHHhhhhhcccCCEEEEec
Confidence 98742 23344556666334677664
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=94.76 E-value=0.1 Score=35.06 Aligned_cols=29 Identities=24% Similarity=0.271 Sum_probs=26.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|.||+.+++.|..-|.+|++.++....
T Consensus 52 G~G~IG~~va~~l~~fg~~v~~~d~~~~~ 80 (199)
T d1dxya1 52 GTGHIGQVAIKLFKGFGAKVIAYDPYPMK 80 (199)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred ecccccccccccccccceeeeccCCccch
Confidence 67999999999999999999999987554
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=94.68 E-value=0.026 Score=36.19 Aligned_cols=29 Identities=24% Similarity=0.315 Sum_probs=26.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|.+|+.+++.|++.|++|+..++.+++
T Consensus 7 G~G~mG~~ia~~l~~~g~~v~~~~~~~~~ 35 (152)
T d1i36a2 7 GFGEVAQTLASRLRSRGVEVVTSLEGRSP 35 (152)
T ss_dssp SCSHHHHHHHHHHHHTTCEEEECCTTCCH
T ss_pred cHHHHHHHHHHHHHHCCCeEEEEcCchhH
Confidence 67999999999999999999998887665
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=94.68 E-value=0.09 Score=34.46 Aligned_cols=91 Identities=12% Similarity=0.094 Sum_probs=58.2
Q ss_pred cccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEe-ecCCC-HHHHHhhhhccCccEEEec
Q 029198 3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK-GDRKD-YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~-~~~l~~~~~~~~~d~vi~~ 79 (197)
|+|.+|...+..+...| .+|+++++++++.+ +.........+. -|-.+ .+.+.+.....++|++|.+
T Consensus 37 G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~----------~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~ 106 (176)
T d1d1ta2 37 GLGGVGLSVIMGCKSAGASRIIGIDLNKDKFE----------KAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEV 106 (176)
T ss_dssp CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHH----------HHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEEC
T ss_pred CCCchhHHHHHHHHHcCCceEEEecCcHHHHH----------HHHhcCCcEEECccccchHHHHHHHHhccccceEEEEe
Confidence 46999999999999999 58999999888732 111112222222 23222 3445555555689999999
Q ss_pred cCCCccchHHHHHhCC-CCCcEEEEe
Q 029198 80 NGREADEVEPILDALP-NLEQFIYCS 104 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~-~~~~~v~~S 104 (197)
.+.. ...+..+..+. +-.+++.++
T Consensus 107 ~g~~-~~~~~a~~~~~~~~G~~v~vG 131 (176)
T d1d1ta2 107 IGHL-ETMIDALASCHMNYGTSVVVG 131 (176)
T ss_dssp SCCH-HHHHHHHTTSCTTTCEEEECS
T ss_pred CCch-HHHHHHHHHhhcCCeEEEEEE
Confidence 8753 33445555555 546888766
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.62 E-value=0.021 Score=36.64 Aligned_cols=68 Identities=18% Similarity=0.301 Sum_probs=42.9
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhhh----ccCceEEEeecCCCHHHHHhhhhccCcc
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAE----FSSKILHLKGDRKDYDFVKSSLSAKGFD 74 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~~~~~d 74 (197)
+|| |++|+.++..|+..+ .++.+++++++...... .++.. ......+...|. +.+. ++|
T Consensus 12 iGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a-----~Dl~~~~~~~~~~~~~~~~d~-------~~l~--daD 76 (148)
T d1ldna1 12 IGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDA-----MDFNHGKVFAPKPVDIWHGDY-------DDCR--DAD 76 (148)
T ss_dssp ECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHH-----HHHHHHTTSSSSCCEEEECCG-------GGTT--TCS
T ss_pred ECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchh-----ccHhhCccccCCCeEEEECCH-------HHhc--cce
Confidence 465 999999999999987 48999998765421100 01110 112344444443 2344 899
Q ss_pred EEEeccCCC
Q 029198 75 VVYDINGRE 83 (197)
Q Consensus 75 ~vi~~a~~~ 83 (197)
+|+.+++..
T Consensus 77 vvvitag~~ 85 (148)
T d1ldna1 77 LVVICAGAN 85 (148)
T ss_dssp EEEECCSCC
T ss_pred eEEEecccc
Confidence 999998874
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=94.60 E-value=0.12 Score=33.76 Aligned_cols=91 Identities=14% Similarity=0.087 Sum_probs=58.2
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCC--CHHHHHhhhhccCccEEEec
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--DYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~l~~~~~~~~~d~vi~~ 79 (197)
|+|.+|...+..+...|. .|++.++++++.. +.+.......+...-. ..+.+.......++|++|.+
T Consensus 36 G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~----------~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~ 105 (174)
T d1e3ia2 36 GLGCVGLSAIIGCKIAGASRIIAIDINGEKFP----------KAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC 105 (174)
T ss_dssp CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHH----------HHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CCChHHHHHHHHHHHhCCceeeeeccchHHHH----------HHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEe
Confidence 469999999999999996 6888888766532 1111122233332222 23444555555689999999
Q ss_pred cCCCccchHHHHHhCC-CCCcEEEEe
Q 029198 80 NGREADEVEPILDALP-NLEQFIYCS 104 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~-~~~~~v~~S 104 (197)
.|.. ......++.++ +-.+++.++
T Consensus 106 ~G~~-~~~~~a~~~~~~g~G~~v~vG 130 (174)
T d1e3ia2 106 AGTA-QTLKAAVDCTVLGWGSCTVVG 130 (174)
T ss_dssp SCCH-HHHHHHHHTBCTTTCEEEECC
T ss_pred cccc-hHHHHHHHHhhcCCeEEEecC
Confidence 9853 44566777777 456888765
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=94.58 E-value=0.0056 Score=40.60 Aligned_cols=30 Identities=23% Similarity=0.414 Sum_probs=27.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|.|.+|..+++.|++.||+|++.+|++++.
T Consensus 8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~ 37 (178)
T d1pgja2 8 GLGVMGANLALNIAEKGFKVAVFNRTYSKS 37 (178)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred eehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 679999999999999999999999987663
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=94.55 E-value=0.0098 Score=39.88 Aligned_cols=29 Identities=21% Similarity=0.229 Sum_probs=25.8
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|.+|+.+++.|..-|.+|...++....
T Consensus 51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~ 79 (188)
T d2naca1 51 AAGRIGLAVLRRLAPFDVHLHYTDRHRLP 79 (188)
T ss_dssp CCSHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred cccccchhhhhhhhccCceEEEEeecccc
Confidence 67999999999999999999999997544
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=94.55 E-value=0.0099 Score=37.12 Aligned_cols=65 Identities=15% Similarity=0.057 Sum_probs=48.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
|-|-+|..+++.| ++++|++++.+++..... ...++.++.+|.++++.++++--. .++.++-+..
T Consensus 7 G~g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~-----------~~~~~~~i~Gd~~~~~~L~~a~i~-~A~~vi~~~~ 71 (129)
T d2fy8a1 7 GWSESTLECLREL--RGSEVFVLAEDENVRKKV-----------LRSGANFVHGDPTRVSDLEKANVR-GARAVIVNLE 71 (129)
T ss_dssp SCCHHHHHHHHTS--CGGGEEEEESCTTHHHHH-----------HHTTCEEEESCTTSHHHHHHTTCT-TCSEEEECCS
T ss_pred CCCHHHHHHHHHH--cCCCCEEEEcchHHHHHH-----------HhcCccccccccCCHHHHHHhhhh-cCcEEEEecc
Confidence 4688999999999 466788888876653211 125789999999999998886432 7888886654
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=94.53 E-value=0.11 Score=34.02 Aligned_cols=90 Identities=13% Similarity=-0.024 Sum_probs=56.9
Q ss_pred ccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC--HHHHHhhhhccCccEEEecc
Q 029198 4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~l~~~~~~~~~d~vi~~a 80 (197)
+|.+|...+..+...|. +|+++++++++.+ +.....-...+...-.| .+.........+.|++|.+.
T Consensus 36 aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~----------~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~~ 105 (174)
T d1p0fa2 36 LGGVGFSAIVGCKAAGASRIIGVGTHKDKFP----------KAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECA 105 (174)
T ss_dssp CSHHHHHHHHHHHHHTCSEEEEECSCGGGHH----------HHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCchhHHHHHHHHHcCCceeeccCChHHHHH----------HHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEcC
Confidence 59999999999999995 7999988876632 11112222333222222 34444455555899999998
Q ss_pred CCCccchHHHHHhCC-CCCcEEEEe
Q 029198 81 GREADEVEPILDALP-NLEQFIYCS 104 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~-~~~~~v~~S 104 (197)
+.. ......+..++ +-.+++.+.
T Consensus 106 g~~-~~~~~~~~~~~~~~G~~v~vG 129 (174)
T d1p0fa2 106 GRI-ETMMNALQSTYCGSGVTVVLG 129 (174)
T ss_dssp CCH-HHHHHHHHTBCTTTCEEEECC
T ss_pred CCc-hHHHHHHHHHHHhcCceEEEE
Confidence 753 44566666666 446777665
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=94.52 E-value=0.0092 Score=40.21 Aligned_cols=29 Identities=14% Similarity=0.095 Sum_probs=25.8
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|.||+.+++.|..-|.+|.+.++....
T Consensus 56 G~G~IG~~va~~l~~fg~~v~~~d~~~~~ 84 (193)
T d1mx3a1 56 GLGRVGQAVALRAKAFGFNVLFYDPYLSD 84 (193)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred ccccccccceeeeeccccceeeccCcccc
Confidence 67999999999999999999999987554
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.47 E-value=0.015 Score=39.25 Aligned_cols=30 Identities=23% Similarity=0.387 Sum_probs=27.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|.|++|..++..|++.|++|++++.+++..
T Consensus 7 GlG~vGl~~a~~la~~g~~V~g~D~n~~~i 36 (202)
T d1mv8a2 7 GLGYVGAVCAGCLSARGHEVIGVDVSSTKI 36 (202)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CCCHhHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence 689999999999999999999999876543
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=94.45 E-value=0.0032 Score=41.18 Aligned_cols=64 Identities=20% Similarity=0.149 Sum_probs=44.1
Q ss_pred CcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|+ |-+|..+++.|.+.|. ++++..|+.++.... .... +... .+.+++.+.+. .+|+||.+.
T Consensus 31 Ga-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l---------~~~~-~~~~-----~~~~~~~~~l~--~~Divi~at 92 (159)
T d1gpja2 31 GA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVEL---------ARDL-GGEA-----VRFDELVDHLA--RSDVVVSAT 92 (159)
T ss_dssp SC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH---------HHHH-TCEE-----CCGGGHHHHHH--TCSEEEECC
T ss_pred CC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHH---------HHhh-hccc-----ccchhHHHHhc--cCCEEEEec
Confidence 54 9999999999999997 788999886553211 1110 1222 23456677777 999999997
Q ss_pred CCC
Q 029198 81 GRE 83 (197)
Q Consensus 81 ~~~ 83 (197)
+..
T Consensus 93 ss~ 95 (159)
T d1gpja2 93 AAP 95 (159)
T ss_dssp SSS
T ss_pred CCC
Confidence 654
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=94.24 E-value=0.029 Score=36.79 Aligned_cols=87 Identities=14% Similarity=0.128 Sum_probs=50.7
Q ss_pred ccchHHHHHHHHHHCCCeE-EEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHH---HHHhhhhccCccEEEec
Q 029198 4 TRFIGVFLSRLLVKEGHQV-TLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~l~~~~~~~~~d~vi~~ 79 (197)
+|.+|...+..+...|.++ ++.++++.+.. +.......+++ |..+.+ .+.++.. .++|+||.+
T Consensus 37 ~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~----------~a~~~Ga~~~i--~~~~~~~~~~i~~~t~-gg~D~vid~ 103 (174)
T d1f8fa2 37 AGAVGLSALLAAKVCGASIIIAVDIVESRLE----------LAKQLGATHVI--NSKTQDPVAAIKEITD-GGVNFALES 103 (174)
T ss_dssp CSHHHHHHHHHHHHHTCSEEEEEESCHHHHH----------HHHHHTCSEEE--ETTTSCHHHHHHHHTT-SCEEEEEEC
T ss_pred CCHHHhhhhhcccccccceeeeeccHHHHHH----------HHHHcCCeEEE--eCCCcCHHHHHHHHcC-CCCcEEEEc
Confidence 4999999999888888755 45555554311 11111222333 334433 3333333 379999999
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEe
Q 029198 80 NGREADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
.+.. ...+..++.++...+++.++
T Consensus 104 ~G~~-~~~~~~~~~~~~~G~i~~~G 127 (174)
T d1f8fa2 104 TGSP-EILKQGVDALGILGKIAVVG 127 (174)
T ss_dssp SCCH-HHHHHHHHTEEEEEEEEECC
T ss_pred CCcH-HHHHHHHhcccCceEEEEEe
Confidence 8752 44556677777445777655
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=94.21 E-value=0.13 Score=29.71 Aligned_cols=73 Identities=14% Similarity=0.189 Sum_probs=45.7
Q ss_pred ccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCCC
Q 029198 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE 83 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~~ 83 (197)
-|..|.++++.|.+.|++|++.+.+........ ......+..+.. +.+ .+. ++|.||-.-|..
T Consensus 13 lG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~----------~~~~~~~~~~~~-~~~----~~~--~~d~vi~SPGi~ 75 (93)
T d2jfga1 13 LGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDK----------LPEAVERHTGSL-NDE----WLM--AADLIVASPGIA 75 (93)
T ss_dssp CSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGG----------SCTTSCEEESBC-CHH----HHH--HCSEEEECTTSC
T ss_pred ECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHH----------Hhhccceeeccc-chh----hhc--cCCEEEECCCCC
Confidence 477899999999999999999999765422111 112344444433 222 234 779999887764
Q ss_pred ccchHHHHHhCC
Q 029198 84 ADEVEPILDALP 95 (197)
Q Consensus 84 ~~~~~~ll~~~~ 95 (197)
. ...++..++
T Consensus 76 ~--~~~~~~~a~ 85 (93)
T d2jfga1 76 L--AHPSLSAAA 85 (93)
T ss_dssp T--TSHHHHHHH
T ss_pred C--CCHHHHHHH
Confidence 3 334444444
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=94.14 E-value=0.18 Score=33.37 Aligned_cols=29 Identities=24% Similarity=0.219 Sum_probs=25.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|.+|+.+++.|..-|.+|+..++....
T Consensus 51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~ 79 (188)
T d1sc6a1 51 GYGHIGTQLGILAESLGMYVYFYDIENKL 79 (188)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCC
T ss_pred ecccchhhhhhhcccccceEeeccccccc
Confidence 67999999999999999999999987554
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=94.04 E-value=0.043 Score=35.84 Aligned_cols=91 Identities=18% Similarity=0.163 Sum_probs=54.7
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
|+|.+|...+..+...|. .|++.++++++.. +.......+.+..+-.+.+...+.....++|+||.+.+
T Consensus 40 GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~----------~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g 109 (172)
T d1h2ba2 40 GVGGLGHIAVQLLKVMTPATVIALDVKEEKLK----------LAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVG 109 (172)
T ss_dssp CCSHHHHHHHHHHHHHCCCEEEEEESSHHHHH----------HHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred CCChHHHHHHHHHHhhcCcccccccchhHHHH----------HHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecC
Confidence 569999999999888885 6777777765421 11111223444333223444455545557999999998
Q ss_pred CCccchHHHHHhCCCCCcEEEEe
Q 029198 82 READEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
.. ......++.++.-.+++.++
T Consensus 110 ~~-~~~~~a~~~l~~~G~iv~~G 131 (172)
T d1h2ba2 110 SQ-ATVDYTPYLLGRMGRLIIVG 131 (172)
T ss_dssp CH-HHHHHGGGGEEEEEEEEECC
T ss_pred cc-hHHHHHHHHHhCCCEEEEEe
Confidence 52 23455566666335777654
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=93.99 E-value=0.016 Score=36.78 Aligned_cols=68 Identities=22% Similarity=0.277 Sum_probs=42.6
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCCccCCCCCCCchhhh---hccCceEEEeecCCCHHHHHhhhhccCccE
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFA---EFSSKILHLKGDRKDYDFVKSSLSAKGFDV 75 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~ 75 (197)
+|+ |.+|+.++..|+.++ .++.+++.+++...... .++. ..........+|. +.++ +.|+
T Consensus 6 IGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~-----~Dl~~~~~~~~~~~~~~~~~-------~~~~--~adi 70 (140)
T d1a5za1 6 VGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDA-----LDLIHGTPFTRRANIYAGDY-------ADLK--GSDV 70 (140)
T ss_dssp ECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHH-----HHHHHHGGGSCCCEEEECCG-------GGGT--TCSE
T ss_pred ECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchh-----ccccccccccccccccCCcH-------HHhc--CCCE
Confidence 365 999999999999887 59999998765432100 1111 1123334443332 2234 8999
Q ss_pred EEeccCCC
Q 029198 76 VYDINGRE 83 (197)
Q Consensus 76 vi~~a~~~ 83 (197)
|+.+++..
T Consensus 71 vvitag~~ 78 (140)
T d1a5za1 71 VIVAAGVP 78 (140)
T ss_dssp EEECCCCC
T ss_pred EEEecccc
Confidence 99998874
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=93.85 E-value=0.014 Score=39.29 Aligned_cols=86 Identities=14% Similarity=0.092 Sum_probs=50.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.||+.+++.|..-|.+|.+.++.......... . .....+++.+++. .+|+|+-+...
T Consensus 54 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-----------~-------~~~~~~~l~~ll~--~sD~v~l~~pl 113 (191)
T d1gdha1 54 GFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS-----------Y-------QATFHDSLDSLLS--VSQFFSLNAPS 113 (191)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH-----------H-------TCEECSSHHHHHH--HCSEEEECCCC
T ss_pred ecccchHHHHHHHHhhccccccccccccccchhhc-----------c-------cccccCCHHHHHh--hCCeEEecCCC
Confidence 67999999999999999999999987554211000 0 0011123556666 67777644433
Q ss_pred Cccc----hHHHHHhCCCCCcEEEEeccee
Q 029198 83 EADE----VEPILDALPNLEQFIYCSSAGV 108 (197)
Q Consensus 83 ~~~~----~~~ll~~~~~~~~~v~~Ss~~v 108 (197)
+... .+..+..|+...-+|++|=..+
T Consensus 114 t~~T~~li~~~~l~~mk~~a~lIN~sRG~i 143 (191)
T d1gdha1 114 TPETRYFFNKATIKSLPQGAIVVNTARGDL 143 (191)
T ss_dssp CTTTTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred CchHhheecHHHhhCcCCccEEEecCCccc
Confidence 2211 2345566664446666664443
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=93.83 E-value=0.022 Score=37.87 Aligned_cols=28 Identities=21% Similarity=0.500 Sum_probs=22.8
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecC
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRG 28 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~ 28 (197)
+||||++|+.|++.|.+.- .++..+..+
T Consensus 11 lGATGyvG~elirLL~~HP~~ei~~l~S~ 39 (183)
T d2cvoa1 11 LGASGYTGAEIVRLLANHPQFRIKVMTAD 39 (183)
T ss_dssp ESCSSHHHHHHHHHHTTCSSEEEEEEECS
T ss_pred ECcccHHHHHHHHHHHhCCCceEEEEecc
Confidence 5999999999999998875 477776543
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=93.82 E-value=0.0088 Score=39.66 Aligned_cols=18 Identities=22% Similarity=0.169 Sum_probs=16.4
Q ss_pred CCcccchHHHHHHHHHHC
Q 029198 1 MGGTRFIGVFLSRLLVKE 18 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~ 18 (197)
|||+|.||++++..|+..
T Consensus 30 ~GA~G~Ig~~l~~~La~g 47 (175)
T d7mdha1 30 SGAAGMISNHLLFKLASG 47 (175)
T ss_dssp ETTTSHHHHHHHHHHHHT
T ss_pred ECCCcHHHHHHHHHHHcC
Confidence 699999999999999875
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=93.77 E-value=0.096 Score=35.24 Aligned_cols=89 Identities=13% Similarity=0.117 Sum_probs=49.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCcc-CCCCCCCchhhhhccCceEEEe-ecCCCHHHHHhhhhccCccEEEecc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLK-GDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|++..|..+++.|.+.|++|.++.-.+++.. ..... .........++.++. .++.+++.+ +.+++.++|+++.+.
T Consensus 7 ~~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~--~~~~~a~~~~i~~~~~~~~~~~~~~-~~i~~~~~Dlii~~g 83 (203)
T d2blna2 7 AYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYG--SVARLAAERGIPVYAPDNVNHPLWV-ERIAQLSPDVIFSFY 83 (203)
T ss_dssp ECHHHHHHHHHHHHHTTCEEEEEECCCC------CCC--CHHHHHHHHTCCEECCSCCCSHHHH-HHHHHTCCSEEEEES
T ss_pred ecCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccC--HHHHHHHHcCCcceecccccchhhh-hhhhhhcccceeeee
Confidence 3456899999999999999988775443311 11111 011111123456555 456666544 445557999998776
Q ss_pred CCCccchHHHHHhCC
Q 029198 81 GREADEVEPILDALP 95 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~ 95 (197)
... --...+++..+
T Consensus 84 ~~~-ii~~~il~~~~ 97 (203)
T d2blna2 84 YRH-LIYDEILQLAP 97 (203)
T ss_dssp CCS-CCCHHHHTTCT
T ss_pred ccc-chhcccchhhH
Confidence 432 22345555544
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.46 E-value=0.012 Score=37.53 Aligned_cols=30 Identities=10% Similarity=0.078 Sum_probs=25.2
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~ 31 (197)
+|+ |.+|++++..|+.+| .++.+++.+++.
T Consensus 6 IGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~ 37 (142)
T d1ojua1 6 VGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDL 37 (142)
T ss_dssp ECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHH
T ss_pred ECc-CHHHHHHHHHHHhcCcCceEEEEecccch
Confidence 364 999999999999887 589999987654
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=93.41 E-value=0.052 Score=34.89 Aligned_cols=19 Identities=21% Similarity=0.135 Sum_probs=17.3
Q ss_pred CCcccchHHHHHHHHHHCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG 19 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g 19 (197)
+||+|++|++++..|+..+
T Consensus 10 iGA~G~VG~~~a~~l~~~~ 28 (154)
T d1y7ta1 10 TGAAGQIGYSLLFRIAAGE 28 (154)
T ss_dssp SSTTSHHHHHHHHHHHTTT
T ss_pred ECCCCHHHHHHHHHHHhcc
Confidence 6999999999999998875
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=93.39 E-value=0.023 Score=37.59 Aligned_cols=27 Identities=19% Similarity=0.322 Sum_probs=22.1
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTR 27 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r 27 (197)
+|||||+|+.|++.|.+. ..++..+.-
T Consensus 7 iGATGyvG~eLlrlL~~HP~~ei~~l~~ 34 (179)
T d2g17a1 7 VGASGYAGAELVSYVNRHPHMTITALTV 34 (179)
T ss_dssp ETTTSHHHHHHHHHHHHCTTEEEEEEEE
T ss_pred ECcccHHHHHHHHHHHhCCCCceEeeEe
Confidence 599999999999999987 457766543
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.31 E-value=0.034 Score=35.83 Aligned_cols=19 Identities=16% Similarity=0.038 Sum_probs=16.8
Q ss_pred CCcccchHHHHHHHHHHCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG 19 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g 19 (197)
+||+|.+|++++..|+..+
T Consensus 9 iGA~G~VG~~la~~l~~~~ 27 (154)
T d5mdha1 9 TGAAGQIAYSLLYSIGNGS 27 (154)
T ss_dssp SSTTSHHHHTTHHHHHTTT
T ss_pred ECCCCHHHHHHHHHHHHHH
Confidence 6999999999999998654
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.30 E-value=0.02 Score=38.48 Aligned_cols=29 Identities=21% Similarity=0.402 Sum_probs=26.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|.+|+.++..++..|++|++++++++.
T Consensus 11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~ 39 (192)
T d1f0ya2 11 GGGLMGAGIAQVAAATGHTVVLVDQTEDI 39 (192)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CcCHHHHHHHHHHHhCCCcEEEEECChHH
Confidence 45999999999999999999999998764
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=93.25 E-value=0.014 Score=37.99 Aligned_cols=30 Identities=10% Similarity=0.158 Sum_probs=25.7
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r~~~~ 31 (197)
+| +|.+|+.++..|+.+|. ++++++++++.
T Consensus 26 IG-aG~VG~~~A~~l~~~~l~~ElvLiD~~~~~ 57 (160)
T d1i0za1 26 VG-VGQVGMACAISILGKSLADELALVDVLEDK 57 (160)
T ss_dssp EC-CSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred EC-CCHHHHHHHHHHHhcCCCcEEEEEEeccch
Confidence 36 49999999999999984 99999987654
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.14 E-value=0.19 Score=31.37 Aligned_cols=66 Identities=20% Similarity=0.200 Sum_probs=41.2
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
.|++|.+|+.+++.+.+. ++++.+..-..+. .. .....++|+||.+
T Consensus 5 ~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-----------------------------~~----~~~~~~~DvvIDF 51 (135)
T d1yl7a1 5 LGAKGKVGATMVRAVAAADDLTLSAELDAGDP-----------------------------LS----LLTDGNTEVVIDF 51 (135)
T ss_dssp ETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-----------------------------TH----HHHTTTCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-----------------------------hh----hhccccCCEEEEc
Confidence 489999999999998776 4676654321111 00 1112378999998
Q ss_pred cCCCccchHHHHHhCC-CCCcEE
Q 029198 80 NGREADEVEPILDALP-NLEQFI 101 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~-~~~~~v 101 (197)
..+ ..+...++.+. ....+|
T Consensus 52 S~p--~~~~~~~~~~~~~~~~~V 72 (135)
T d1yl7a1 52 THP--DVVMGNLEFLIDNGIHAV 72 (135)
T ss_dssp CCT--TTHHHHHHHHHHTTCEEE
T ss_pred ccH--HHHHHHHHHHHhcCCCEE
Confidence 854 46666666666 334444
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=93.13 E-value=0.37 Score=31.14 Aligned_cols=90 Identities=18% Similarity=0.134 Sum_probs=54.7
Q ss_pred CcccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEE-eecCCC-HHHHHhhhhccCccEEEe
Q 029198 2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD-YDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~-~~~l~~~~~~~~~d~vi~ 78 (197)
|+ |.+|...+..+...| .+|+++++++++.. +.........+ ..+-.+ .+.........++|++|.
T Consensus 36 Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~----------~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid 104 (176)
T d2jhfa2 36 GL-GGVGLSVIMGCKAAGAARIIGVDINKDKFA----------KAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFE 104 (176)
T ss_dssp CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH----------HHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CC-CCcHHHHHHHHHHcCCceEEeecCcHHHHH----------HHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEe
Confidence 55 669999999999998 58999998877632 11111222222 223222 344445555458999999
Q ss_pred ccCCCccchHHHHHhCC-CCCcEEEE
Q 029198 79 INGREADEVEPILDALP-NLEQFIYC 103 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~-~~~~~v~~ 103 (197)
+.+.. ...+..+..++ +...++..
T Consensus 105 ~~G~~-~~~~~a~~~~~~~~g~~~~~ 129 (176)
T d2jhfa2 105 VIGRL-DTMVTALSCCQEAYGVSVIV 129 (176)
T ss_dssp CSCCH-HHHHHHHHHBCTTTCEEEEC
T ss_pred cCCch-hHHHHHHHHHhcCCcceEEe
Confidence 98853 34556677777 44444433
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=93.00 E-value=0.31 Score=33.52 Aligned_cols=104 Identities=13% Similarity=0.101 Sum_probs=64.5
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCC---------CC-----chhhhhccCceEEEeecCC-CHHHHHh
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG---------ES-----DQEFAEFSSKILHLKGDRK-DYDFVKS 66 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---------~~-----~~~~~~~~~~~~~~~~d~~-~~~~l~~ 66 (197)
|.|.+|++++..|+..|- ++++++...-+..+..+. .. ...+.+.++.+.+...+.. +.+....
T Consensus 37 G~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~~~~~~~~ 116 (247)
T d1jw9b_ 37 GLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLDDAELAA 116 (247)
T ss_dssp CCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhhhhccccc
Confidence 579999999999999995 888888765443221110 11 1234566677777766543 4555666
Q ss_pred hhhccCccEEEeccCCCccchHH-HHHhCC-CCCcEEEEecceecc
Q 029198 67 SLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~-ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
.+. ..|+++.+.-. ...+. +-+.+. ....+|+.+..+.+|
T Consensus 117 ~~~--~~divid~~d~--~~~~~~in~~~~~~~ip~i~g~~~~~~g 158 (247)
T d1jw9b_ 117 LIA--EHDLVLDCTDN--VAVRNQLNAGCFAAKVPLVSGAAIRMEG 158 (247)
T ss_dssp HHH--TSSEEEECCSS--HHHHHHHHHHHHHHTCCEEEEEEEBTEE
T ss_pred ccc--ccceeeeccch--hhhhhhHHHHHHHhCCCccccccccccc
Confidence 666 89999977632 23343 334444 445677766555555
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=92.99 E-value=0.019 Score=36.63 Aligned_cols=30 Identities=20% Similarity=0.299 Sum_probs=25.7
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~ 31 (197)
+|+ |.+|++++..|+.+| .++.++++++..
T Consensus 7 IGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~ 38 (143)
T d1llda1 7 IGA-GAVGSTLAFAAAQRGIAREIVLEDIAKER 38 (143)
T ss_dssp ECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHH
T ss_pred ECC-CHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 465 999999999999998 499999987654
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=92.91 E-value=0.016 Score=37.86 Aligned_cols=86 Identities=16% Similarity=0.176 Sum_probs=46.8
Q ss_pred CCcccchHHHHHHHHHHC-CCeEEEEe-cCCCCccCCCCCCCchhhhhcc-CceEEEeecCCCHHHHHhhhhccCccEEE
Q 029198 1 MGGTRFIGVFLSRLLVKE-GHQVTLFT-RGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~~~~d~vi 77 (197)
.|++|.+|+.+++.+.+. +.++++.. |........... ++.... ..+. +..| +..+++ .+|+||
T Consensus 10 ~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~----~~~~~~~~~~~-~~~~------~~~~~~--~~DViI 76 (162)
T d1diha1 10 AGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAG----ELAGAGKTGVT-VQSS------LDAVKD--DFDVFI 76 (162)
T ss_dssp TTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTT----CSSSSSCCSCC-EESC------STTTTT--SCSEEE
T ss_pred ECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhh----hhhccccCCce-eecc------HHHHhc--ccceEE
Confidence 589999999999999887 56665554 433321111100 000000 1111 1122 223455 899999
Q ss_pred eccCCCccchHHHHHhCC-CCCcEE
Q 029198 78 DINGREADEVEPILDALP-NLEQFI 101 (197)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~-~~~~~v 101 (197)
.+..+ ..+...++.+. ....+|
T Consensus 77 DFs~p--~~~~~~~~~a~~~~~~~V 99 (162)
T d1diha1 77 DFTRP--EGTLNHLAFCRQHGKGMV 99 (162)
T ss_dssp ECSCH--HHHHHHHHHHHHTTCEEE
T ss_pred EeccH--HHHHHHHHHHHhccceeE
Confidence 98753 45666667666 434444
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.85 E-value=0.054 Score=35.04 Aligned_cols=87 Identities=10% Similarity=0.086 Sum_probs=50.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHH---HHHhhhhccCccEEEec
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~l~~~~~~~~~d~vi~~ 79 (197)
|+|.+|...+..+...|.+|+++++++.+... ..+. .--..+ |..+.+ .+.+... +.+.++.+
T Consensus 35 GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~---------a~~~-Ga~~~i--~~~~~~~~~~~~~~~~--g~~~~i~~ 100 (166)
T d1llua2 35 GIGGLGHVAVQYARAMGLHVAAIDIDDAKLEL---------ARKL-GASLTV--NARQEDPVEAIQRDIG--GAHGVLVT 100 (166)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHT-TCSEEE--ETTTSCHHHHHHHHHS--SEEEEEEC
T ss_pred eccccHHHHHHHHHHcCCccceecchhhHHHh---------hhcc-Cccccc--cccchhHHHHHHHhhc--CCcccccc
Confidence 45999999999888889999999998765321 1111 112223 333333 3333332 56666666
Q ss_pred cCCCccchHHHHHhCCCCCcEEEEe
Q 029198 80 NGREADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
++.. ......++.++...+++.++
T Consensus 101 ~~~~-~~~~~~~~~l~~~G~iv~~G 124 (166)
T d1llua2 101 AVSN-SAFGQAIGMARRGGTIALVG 124 (166)
T ss_dssp CSCH-HHHHHHHTTEEEEEEEEECC
T ss_pred cccc-hHHHHHHHHhcCCcEEEEEE
Confidence 5542 34555666666335666654
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.84 E-value=0.058 Score=32.76 Aligned_cols=29 Identities=24% Similarity=0.387 Sum_probs=26.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|++|..++..|.+.|.+|+++.|.+.-
T Consensus 29 GgG~ig~E~A~~l~~~G~~Vtlve~~~~i 57 (117)
T d1ebda2 29 GGGYIGIELGTAYANFGTKVTILEGAGEI 57 (117)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCCccceeeeeeecccccEEEEEEeccee
Confidence 57999999999999999999999998764
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.78 E-value=0.052 Score=33.37 Aligned_cols=29 Identities=21% Similarity=0.297 Sum_probs=26.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|++|..++..|.+.|.+|+++.+.+.-
T Consensus 30 G~G~ig~E~A~~l~~lG~~Vtii~~~~~~ 58 (122)
T d1v59a2 30 GGGIIGLEMGSVYSRLGSKVTVVEFQPQI 58 (122)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCchHHHHHHHHHhhCcceeEEEecccc
Confidence 56999999999999999999999997665
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=92.74 E-value=0.0085 Score=38.49 Aligned_cols=30 Identities=17% Similarity=0.349 Sum_probs=25.1
Q ss_pred CCcccchHHHHHHHHHHCC--CeEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g--~~V~~~~r~~~~ 31 (197)
+| +|++|+.++..|+.+| .++++++.+++.
T Consensus 7 IG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~ 38 (146)
T d1hyha1 7 IG-LGNVGAAVAHGLIAQGVADDYVFIDANEAK 38 (146)
T ss_dssp EC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred EC-cCHHHHHHHHHHHhcCCCceEEEEecccch
Confidence 36 5999999999999887 589999987654
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=92.68 E-value=0.026 Score=37.54 Aligned_cols=30 Identities=20% Similarity=0.259 Sum_probs=26.1
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
.|.|.+|+.+++.|..-|.+|++.++...+
T Consensus 50 iG~G~IG~~va~~~~~fg~~v~~~d~~~~~ 79 (184)
T d1ygya1 50 VGLGRIGQLVAQRIAAFGAYVVAYDPYVSP 79 (184)
T ss_dssp ECCSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred ccccchhHHHHHHhhhccceEEeecCCCCh
Confidence 367999999999999999999999987554
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=92.65 E-value=0.092 Score=32.20 Aligned_cols=29 Identities=28% Similarity=0.512 Sum_probs=26.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|++|..++..|.+.|.+|+.+.+.+.-
T Consensus 37 GgG~iG~E~A~~l~~~g~~Vtlie~~~~~ 65 (123)
T d1nhpa2 37 GSGYIGIEAAEAFAKAGKKVTVIDILDRP 65 (123)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CChHHHHHHHHHhhccceEEEEEEecCcc
Confidence 67999999999999999999999997654
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=92.59 E-value=0.046 Score=35.06 Aligned_cols=30 Identities=30% Similarity=0.483 Sum_probs=24.2
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~ 31 (197)
+| +|.+|+.++..|...+ .++.+++++++.
T Consensus 9 IG-aG~VG~~~a~~l~~~~l~el~L~Di~~~~ 39 (150)
T d1t2da1 9 VG-SGMIGGVMATLIVQKNLGDVVLFDIVKNM 39 (150)
T ss_dssp EC-CSHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred EC-CCHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence 36 5999999998777776 589999987654
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=92.42 E-value=0.024 Score=37.06 Aligned_cols=89 Identities=10% Similarity=0.144 Sum_probs=62.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhc-cCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
|.|-.|..-++.+...|.+|++++.+.+..+. +.+. ...++. -..+.+.+.+.++ ..|+||.++-
T Consensus 39 GaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~---------l~~~~~~~~~~---~~~~~~~l~~~~~--~aDivI~aal 104 (168)
T d1pjca1 39 GGGVVGTEAAKMAVGLGAQVQIFDINVERLSY---------LETLFGSRVEL---LYSNSAEIETAVA--EADLLIGAVL 104 (168)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHHGGGSEE---EECCHHHHHHHHH--TCSEEEECCC
T ss_pred CCChHHHHHHHHHhhCCCEEEEEeCcHHHHHH---------HHHhhccccee---ehhhhhhHHHhhc--cCcEEEEeee
Confidence 46899999999999999999999998766321 1111 122333 3567788889998 9999999876
Q ss_pred CCcc-----chHHHHHhCCCCCcEEEEec
Q 029198 82 READ-----EVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 82 ~~~~-----~~~~ll~~~~~~~~~v~~Ss 105 (197)
..-. =++.+++.|+.-.-+|=++.
T Consensus 105 ipG~~aP~lIt~~mv~~Mk~GSVIVDvai 133 (168)
T d1pjca1 105 VPGRRAPILVPASLVEQMRTGSVIVDVAV 133 (168)
T ss_dssp CTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred cCCcccCeeecHHHHhhcCCCcEEEEeec
Confidence 5322 27889999993345555553
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.38 E-value=0.079 Score=33.81 Aligned_cols=56 Identities=20% Similarity=0.166 Sum_probs=40.8
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
+.||+|..++..|.+.|++|+++.+.+.-... .|-.....+.+.+.+.++++..+.
T Consensus 48 ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~~---------------------~~~~~~~~~~~~l~~~GV~i~~~~ 103 (156)
T d1djqa2 48 DTYFMAPSLAEKLATAGHEVTIVSGVHLANYM---------------------HFTLEYPNMMRRLHELHVEELGDH 103 (156)
T ss_dssp CCSSHHHHHHHHHHHTTCEEEEEESSCTTTHH---------------------HHTTCHHHHHHHHHHTTCEEEETE
T ss_pred CCChHHHHHHHHHHHcCCeEEEEecCCccccc---------------------cchhHHHHHHHHHhhccceEEecc
Confidence 56999999999999999999999997544211 133455566666665677777654
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=92.26 E-value=0.077 Score=32.38 Aligned_cols=29 Identities=24% Similarity=0.339 Sum_probs=26.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|++|-.++..|.+.|.+|+++.+.+.-
T Consensus 29 G~G~ig~E~A~~l~~~G~~Vtiv~~~~~l 57 (119)
T d3lada2 29 GAGVIGLELGSVWARLGAEVTVLEAMDKF 57 (119)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCChHHHHHHHHHHHcCCceEEEEeeccc
Confidence 57999999999999999999999998665
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=92.23 E-value=0.063 Score=32.92 Aligned_cols=29 Identities=38% Similarity=0.536 Sum_probs=26.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|++|-.++..|.+.|++|+.+.|.+.-
T Consensus 39 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~l 67 (122)
T d1xhca2 39 GGGFIGLELAGNLAEAGYHVKLIHRGAMF 67 (122)
T ss_dssp ECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CCcHHHHHHHHHhhcccceEEEEeccccc
Confidence 67999999999999999999999986543
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=92.10 E-value=0.065 Score=32.66 Aligned_cols=29 Identities=28% Similarity=0.497 Sum_probs=26.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|++|..++..|.+.|.+|+++.|.+.-
T Consensus 29 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~i 57 (117)
T d1onfa2 29 GSGYIAVELINVIKRLGIDSYIFARGNRI 57 (117)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred CCchHHHHHHHHHHhccccceeeehhccc
Confidence 67999999999999999999999998654
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=92.10 E-value=0.058 Score=32.68 Aligned_cols=29 Identities=28% Similarity=0.334 Sum_probs=26.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|++|..++..|.+.|++|+++.+.+.-
T Consensus 28 GgG~~G~E~A~~l~~~g~~Vtlve~~~~i 56 (115)
T d1lvla2 28 GGGYIGLELGIAYRKLGAQVSVVEARERI 56 (115)
T ss_dssp CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCHHHHHHHHHHhhcccceEEEeeeccc
Confidence 67999999999999999999999997654
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=92.00 E-value=0.075 Score=32.24 Aligned_cols=29 Identities=34% Similarity=0.516 Sum_probs=26.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|++|..++..|.+.|.+|+++.|.+..
T Consensus 28 GgG~ig~E~A~~l~~~G~~Vtlve~~~~~ 56 (116)
T d1gesa2 28 GAGYIGVELGGVINGLGAKTHLFEMFDAP 56 (116)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCChhhHHHHHHhhccccEEEEEeecchh
Confidence 67999999999999999999999998654
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=91.91 E-value=0.14 Score=32.76 Aligned_cols=88 Identities=18% Similarity=0.192 Sum_probs=54.9
Q ss_pred CCcccchHHHHHHHHHHC--CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeec-------------------CC
Q 029198 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD-------------------RK 59 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-------------------~~ 59 (197)
+|+||.||...++-+.+. .++|.+++-...... + .....+..+...++.-+ +.
T Consensus 7 lGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~--L----~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~ 80 (151)
T d1q0qa2 7 LGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTR--M----VEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLS 80 (151)
T ss_dssp ETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHH--H----HHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred EcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHH--H----HHHHHHHhhcccccccHHHHHHHHHHhhhhcccccccc
Confidence 599999999999999876 478999887654311 0 01112222332222100 12
Q ss_pred CHHHHHhhhhccCccEEEeccCCCccchHHHHHhCC
Q 029198 60 DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALP 95 (197)
Q Consensus 60 ~~~~l~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~ 95 (197)
..+.+.++.....+|.|++... ...+....+.+++
T Consensus 81 g~~~l~~~~~~~~~D~vi~AI~-G~aGL~~t~~aik 115 (151)
T d1q0qa2 81 GQQAACDMAALEDVDQVMAAIV-GAAGLLPTLAAIR 115 (151)
T ss_dssp SHHHHHHHHTCTTCCEEEECCS-SGGGHHHHHHHHH
T ss_pred ChHHHHHHhcCCCCCEEEEecC-cccHHHHHHHHHh
Confidence 3456666666568999997764 3477888888887
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=91.65 E-value=0.073 Score=34.33 Aligned_cols=88 Identities=11% Similarity=0.125 Sum_probs=52.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeec-CCC-HHHHHhhhhccCccEEEecc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD-RKD-YDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~-~~~l~~~~~~~~~d~vi~~a 80 (197)
|+|.+|...+..+...|.+|+++++++++... ..+. +...+... -.| .+.+..... +.+.++.++
T Consensus 35 G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~---------~k~~--Ga~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~ 101 (168)
T d1rjwa2 35 GIGGLGHVAVQYAKAMGLNVVAVDIGDEKLEL---------AKEL--GADLVVNPLKEDAAKFMKEKVG--GVHAAVVTA 101 (168)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH---------HHHT--TCSEEECTTTSCHHHHHHHHHS--SEEEEEESS
T ss_pred ecccchhhhhHHHhcCCCeEeccCCCHHHhhh---------hhhc--CcceecccccchhhhhcccccC--CCceEEeec
Confidence 56999999999998899999999987765311 1111 22222211 122 233444444 566666666
Q ss_pred CCCccchHHHHHhCCCCCcEEEEe
Q 029198 81 GREADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~v~~S 104 (197)
+. .......++.++...+++.++
T Consensus 102 ~~-~~~~~~a~~~l~~~G~i~~~g 124 (168)
T d1rjwa2 102 VS-KPAFQSAYNSIRRGGACVLVG 124 (168)
T ss_dssp CC-HHHHHHHHHHEEEEEEEEECC
T ss_pred CC-HHHHHHHHHHhccCCceEecc
Confidence 53 455677777777334566553
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=91.60 E-value=0.036 Score=35.48 Aligned_cols=29 Identities=24% Similarity=0.351 Sum_probs=26.0
Q ss_pred cccchHHHHHHHHHHCC-CeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g-~~V~~~~r~~~~ 31 (197)
|+|.+|++++..|++.| ++|++.+|++++
T Consensus 7 G~G~MG~ai~~~l~~~~~~~i~v~~r~~~~ 36 (152)
T d1yqga2 7 GGGNMAAAVAGGLVKQGGYRIYIANRGAEK 36 (152)
T ss_dssp CCSHHHHHHHHHHHHHCSCEEEEECSSHHH
T ss_pred cCcHHHHHHHHHHHHCCCCcEEEEeCChhH
Confidence 56999999999999988 899999998765
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=91.53 E-value=0.13 Score=32.06 Aligned_cols=30 Identities=23% Similarity=0.409 Sum_probs=27.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|+|++|..++..|.+.|.+|+.+.+.+...
T Consensus 42 GgG~iG~E~A~~l~~~g~~Vtvie~~~~~l 71 (133)
T d1q1ra2 42 GGGYIGLEVAATAIKANMHVTLLDTAARVL 71 (133)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCchHHHHHHHHHHhhCcceeeeeeccccc
Confidence 579999999999999999999999987653
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.35 E-value=0.095 Score=32.22 Aligned_cols=29 Identities=24% Similarity=0.424 Sum_probs=26.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|++|..++..|.+.|.+|+++.|++.-
T Consensus 29 GgG~iG~E~A~~l~~~G~~Vtlv~~~~~~ 57 (125)
T d3grsa2 29 GAGYIAVEMAGILSALGSKTSLMIRHDKV 57 (125)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCccHHHHHHHHhcCCcEEEEEeecccc
Confidence 56999999999999999999999997654
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=91.34 E-value=0.092 Score=32.18 Aligned_cols=26 Identities=23% Similarity=0.443 Sum_probs=24.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRG 28 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~ 28 (197)
|.|++|..++..|.+.|.+|+++.|+
T Consensus 27 GgG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 27 GASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCccHHHHHHHHhhcCCeEEEEEec
Confidence 57999999999999999999999874
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.82 E-value=0.016 Score=37.65 Aligned_cols=30 Identities=13% Similarity=0.247 Sum_probs=25.2
Q ss_pred CCcccchHHHHHHHHHHCCC--eEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~--~V~~~~r~~~~ 31 (197)
+| +|.||+.++..|+..|. ++++++++++.
T Consensus 25 IG-aG~VG~~~A~~l~~~~l~~elvL~D~~~~~ 56 (159)
T d2ldxa1 25 VG-VGDVGMACAISILLKGLADELALVDADTDK 56 (159)
T ss_dssp EC-CSHHHHHHHHHHHTTTSCSEEEEECSCHHH
T ss_pred EC-CCHHHHHHHHHHHhcCCCCEEEEEeCCchh
Confidence 36 49999999999999984 89999987644
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=90.73 E-value=0.069 Score=34.80 Aligned_cols=30 Identities=17% Similarity=-0.013 Sum_probs=26.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|+|..+++++..|.+.|.+|+++.|+.++.
T Consensus 25 GaGGaarai~~al~~~g~~i~I~nRt~~ka 54 (170)
T d1nyta1 25 GAGGASRGVLLPLLSLDCAVTITNRTVSRA 54 (170)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred CCcHHHHHHHHHhcccceEEEeccchHHHH
Confidence 568899999999999999999999987653
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=90.64 E-value=0.11 Score=33.68 Aligned_cols=29 Identities=17% Similarity=0.368 Sum_probs=25.3
Q ss_pred cccchHHHHHHHHHHCCC--eEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGH--QVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~--~V~~~~r~~~~ 31 (197)
|+|.+|.++++.|.+.|+ +|++.+++++.
T Consensus 8 G~G~mG~sla~~L~~~g~~~~I~~~D~~~~~ 38 (171)
T d2g5ca2 8 GVGFMGGSFAKSLRRSGFKGKIYGYDINPES 38 (171)
T ss_dssp SCSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred ccCHHHHHHHHHHHhcCCCeEEEEEECChHH
Confidence 579999999999999985 89999998654
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=90.61 E-value=0.1 Score=32.03 Aligned_cols=30 Identities=20% Similarity=0.382 Sum_probs=27.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|.|++|-.++..|.+.|.+|+++.|.+...
T Consensus 32 G~G~iglE~A~~~~~~G~~Vtvi~~~~~~l 61 (123)
T d1dxla2 32 GAGYIGLEMGSVWGRIGSEVTVVEFASEIV 61 (123)
T ss_dssp CCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred ccchHHHHHHHHHHhcCCeEEEEEEccccC
Confidence 569999999999999999999999987663
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=90.28 E-value=1 Score=28.79 Aligned_cols=82 Identities=17% Similarity=0.104 Sum_probs=46.9
Q ss_pred CcccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEee-c-CCCHHHHHhhhhccCccEEEe
Q 029198 2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG-D-RKDYDFVKSSLSAKGFDVVYD 78 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d-~~~~~~l~~~~~~~~~d~vi~ 78 (197)
|+ |.+|...+..+...|. .|++.++++++.+ +.....--..+.. + -.+...........++|+||.
T Consensus 36 Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~----------~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid 104 (176)
T d2fzwa2 36 GL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA----------RAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFE 104 (176)
T ss_dssp CC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH----------HHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred cc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH----------HHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeee
Confidence 44 6789999999988895 5666666555521 1111122222222 1 123333334444458999999
Q ss_pred ccCCCccchHHHHHhCC
Q 029198 79 INGREADEVEPILDALP 95 (197)
Q Consensus 79 ~a~~~~~~~~~ll~~~~ 95 (197)
+.|.. ...+..+..++
T Consensus 105 ~~G~~-~~~~~~~~~~~ 120 (176)
T d2fzwa2 105 CIGNV-KVMRAALEACH 120 (176)
T ss_dssp CSCCH-HHHHHHHHTBC
T ss_pred cCCCH-HHHHHHHHhhc
Confidence 98742 34556666666
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=90.07 E-value=0.12 Score=31.84 Aligned_cols=29 Identities=14% Similarity=0.233 Sum_probs=26.5
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|++|..++..|.+.|.+|+++.+.+.-
T Consensus 33 GgG~IG~E~A~~~~~~G~~Vtive~~~~i 61 (125)
T d1ojta2 33 GGGIIGLEMGTVYSTLGSRLDVVEMMDGL 61 (125)
T ss_dssp SCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence 56999999999999999999999998655
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=90.06 E-value=0.096 Score=34.20 Aligned_cols=30 Identities=13% Similarity=0.015 Sum_probs=26.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|+|..+.+++..|.+.+.+|+++.|+.++.
T Consensus 25 GaGGaarai~~aL~~~~~~i~I~nR~~~~a 54 (171)
T d1p77a1 25 GAGGATKGVLLPLLQAQQNIVLANRTFSKT 54 (171)
T ss_dssp CCSHHHHTTHHHHHHTTCEEEEEESSHHHH
T ss_pred CCcHHHHHHHHHHcccCceeeeccchHHHH
Confidence 678899999999998888999999987653
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=89.62 E-value=0.7 Score=27.42 Aligned_cols=85 Identities=14% Similarity=0.067 Sum_probs=53.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|+|.+|..-++.|++.|.+|+.++....+.... .....++.+....+.+.+ +. +.+.|+.+.+.
T Consensus 19 G~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~---------~~~~~~i~~~~~~~~~~d-----l~--~~~lv~~at~d 82 (113)
T d1pjqa1 19 GGGDVAERKARLLLEAGARLTVNALTFIPQFTV---------WANEGMLTLVEGPFDETL-----LD--SCWLAIAATDD 82 (113)
T ss_dssp CCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHH---------HHTTTSCEEEESSCCGGG-----GT--TCSEEEECCSC
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeccCChHHHH---------HHhcCCceeeccCCCHHH-----hC--CCcEEeecCCC
Confidence 579999999999999999999998765542211 111245777766655322 33 77888755432
Q ss_pred CccchHHHHHhCCCCCcEEEEe
Q 029198 83 EADEVEPILDALPNLEQFIYCS 104 (197)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~v~~S 104 (197)
..-...+.+.++....+|++.
T Consensus 83 -~~~n~~i~~~a~~~~ilVNv~ 103 (113)
T d1pjqa1 83 -DTVNQRVSDAAESRRIFCNVV 103 (113)
T ss_dssp -HHHHHHHHHHHHHTTCEEEET
T ss_pred -HHHHHHHHHHHHHcCCEEEeC
Confidence 222345666666434566654
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=89.52 E-value=0.19 Score=28.12 Aligned_cols=29 Identities=21% Similarity=0.149 Sum_probs=26.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|.+|+-++....+.|+++..++-.++.
T Consensus 8 G~GQLgrMl~~Aa~~LG~~v~vldp~~~~ 36 (78)
T d3etja2 8 GNGQLGRMLRQAGEPLGIAVWPVGLDAEP 36 (78)
T ss_dssp BCSHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred cCCHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence 67999999999999999999999987665
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=89.52 E-value=0.086 Score=33.75 Aligned_cols=28 Identities=14% Similarity=0.186 Sum_probs=22.8
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|.+|..+++.|++.|+.+ ...|+.++
T Consensus 7 GlG~MG~~ma~~L~~~g~~~-~~~~~~~~ 34 (156)
T d2cvza2 7 GLGAMGYPMAGHLARRFPTL-VWNRTFEK 34 (156)
T ss_dssp CCSTTHHHHHHHHHTTSCEE-EECSSTHH
T ss_pred eHHHHHHHHHHHHHhCCCEE-EEeCCHHH
Confidence 57999999999999999865 56676554
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=89.45 E-value=0.21 Score=33.24 Aligned_cols=67 Identities=16% Similarity=0.038 Sum_probs=41.1
Q ss_pred ccchHHHHHHHHHHCCC-eEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCC---HHHHHhhhhccCccEEEec
Q 029198 4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 4 tG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~l~~~~~~~~~d~vi~~ 79 (197)
+|.+|...+..+...|. +|+++++++++.. +.... +...+ .+..+ .+.+.++....++|++|.+
T Consensus 34 aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~----------~a~~~-Ga~~~-~~~~~~~~~~~i~~~t~g~g~D~vid~ 101 (195)
T d1kola2 34 AGPVGLAAAASARLLGAAVVIVGDLNPARLA----------HAKAQ-GFEIA-DLSLDTPLHEQIAALLGEPEVDCAVDA 101 (195)
T ss_dssp CSHHHHHHHHHHHHTTCSEEEEEESCHHHHH----------HHHHT-TCEEE-ETTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred cCHHHHHHHHHHHhhcccceeeecccchhhH----------hhhhc-cccEE-EeCCCcCHHHHHHHHhCCCCcEEEEEC
Confidence 58999888877777775 7888888765521 11111 22222 23333 2345555555689999999
Q ss_pred cCC
Q 029198 80 NGR 82 (197)
Q Consensus 80 a~~ 82 (197)
.|.
T Consensus 102 vG~ 104 (195)
T d1kola2 102 VGF 104 (195)
T ss_dssp CCT
T ss_pred ccc
Confidence 874
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=89.42 E-value=0.055 Score=36.07 Aligned_cols=82 Identities=13% Similarity=0.206 Sum_probs=48.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhh---hhccCceEEEeecCCCHHHHHhhhhccCccEEEec
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF---AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~ 79 (197)
|+|..|.+++..|.+.||+|.+.+|+++............++ ....+++.+ ..++.++++ +.|+||.+
T Consensus 14 GaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~-------t~~l~~a~~--~ad~iiia 84 (189)
T d1n1ea2 14 GSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF-------TSDVEKAYN--GAEIILFV 84 (189)
T ss_dssp CCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE-------ESCHHHHHT--TCSCEEEC
T ss_pred CCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccccccccc-------chhhhhccC--CCCEEEEc
Confidence 679999999999999999999999976543210000000000 011122222 224566777 88999765
Q ss_pred cCCCccchHHHHHhCC
Q 029198 80 NGREADEVEPILDALP 95 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~ 95 (197)
. +...++.+++.++
T Consensus 85 v--Ps~~~~~~~~~~~ 98 (189)
T d1n1ea2 85 I--PTQFLRGFFEKSG 98 (189)
T ss_dssp S--CHHHHHHHHHHHC
T ss_pred C--cHHHHHHHHHHHH
Confidence 4 3456666665543
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=88.87 E-value=1.6 Score=28.05 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=54.8
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCcc--------CCCCCCCchhhhhcc-----CceEEEeecCCCHHHHHhhhh
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--------QQLPGESDQEFAEFS-----SKILHLKGDRKDYDFVKSSLS 69 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~l~~~~~ 69 (197)
|=|.+|+.+.+.+++.+.+|+++.-...... ....+.......... .+-.+....-.+++++.-.-.
T Consensus 7 GfGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~i~W~~~ 86 (169)
T d1dssg1 7 GFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPENIPWSKA 86 (169)
T ss_dssp CCSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGGCCHHHH
T ss_pred CCcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHHCCcccc
Confidence 4588999999999999988888775332211 001111111111000 111122223345554443333
Q ss_pred ccCccEEEeccCCCccchHHHHHhCC-CCCcEEEE
Q 029198 70 AKGFDVVYDINGREADEVEPILDALP-NLEQFIYC 103 (197)
Q Consensus 70 ~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~ 103 (197)
++|+|+-|.|.. ...+.+-..+. +.++++..
T Consensus 87 --gvD~ViEcTG~f-~~~~~~~~hl~~gakkViis 118 (169)
T d1dssg1 87 --GAEYIVESTGVF-TTIEKASAHFKGGAKKVIIS 118 (169)
T ss_dssp --TCCEEEECSSSC-CSHHHHGGGGTTTCSEEEES
T ss_pred --CCCEEEecCceE-cCHHHHHHHHhcCCceEeec
Confidence 899999999986 34445556667 78887763
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=88.78 E-value=0.4 Score=31.37 Aligned_cols=28 Identities=14% Similarity=0.217 Sum_probs=23.0
Q ss_pred cccchHHHHHHHHHHCC-CeEEEEecCCC
Q 029198 3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKA 30 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g-~~V~~~~r~~~ 30 (197)
|.|.+|+.+++.|.+++ .+|+++....+
T Consensus 8 GfGRIGR~v~Ral~~~~dievVaInd~~~ 36 (178)
T d1b7go1 8 GYGTIGKRVADAIIKQPDMKLVGVAKTSP 36 (178)
T ss_dssp CCSHHHHHHHHHHHTCTTEEEEEEECSSC
T ss_pred CCCHHHHHHHHHHHhCCCCEEEEEECCCC
Confidence 57999999999999875 68888876543
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=88.52 E-value=1.7 Score=27.63 Aligned_cols=88 Identities=13% Similarity=0.120 Sum_probs=50.9
Q ss_pred cccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEee-cCC-CHHHHHhhhhccCccEEEec
Q 029198 3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG-DRK-DYDFVKSSLSAKGFDVVYDI 79 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~-~~~~l~~~~~~~~~d~vi~~ 79 (197)
|+|.+|...+..+...| .+|+++++++++.+. ..+. .--+.+.. +-. ..+.+.......++|++|.+
T Consensus 36 G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~---------a~~~-GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~ 105 (175)
T d1cdoa2 36 GLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK---------AKVF-GATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 105 (175)
T ss_dssp CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH---------HHHT-TCCEEECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred ecCCccchHHHHHHHHhhchheeecchHHHHHH---------HHHc-CCcEEEcCCCcchhHHHHHHhhccCCcceeeee
Confidence 34668888888888876 479999888776321 1111 22233322 222 23455555555689999999
Q ss_pred cCCCccchHHHHHhCC-CCCcEE
Q 029198 80 NGREADEVEPILDALP-NLEQFI 101 (197)
Q Consensus 80 a~~~~~~~~~ll~~~~-~~~~~v 101 (197)
.|.. ......+..++ +-..++
T Consensus 106 ~G~~-~~~~~a~~~~~~g~~~~~ 127 (175)
T d1cdoa2 106 VGNV-GVMRNALESCLKGWGVSV 127 (175)
T ss_dssp SCCH-HHHHHHHHTBCTTTCEEE
T ss_pred cCCH-HHHHHHHHHhhCCCccee
Confidence 9852 33445555555 333443
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=88.28 E-value=0.43 Score=30.82 Aligned_cols=17 Identities=12% Similarity=0.255 Sum_probs=12.6
Q ss_pred HhhhhccCccEEEeccCCC
Q 029198 65 KSSLSAKGFDVVYDINGRE 83 (197)
Q Consensus 65 ~~~~~~~~~d~vi~~a~~~ 83 (197)
.+... +.|+||.+.|..
T Consensus 75 ~~~~~--~ADivI~a~G~p 91 (166)
T d1b0aa1 75 RHHVE--NADLLIVAVGKP 91 (166)
T ss_dssp HHHHH--HCSEEEECSCCT
T ss_pred HHHHh--hhhHhhhhccCc
Confidence 44445 889999998864
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=88.20 E-value=0.56 Score=30.19 Aligned_cols=76 Identities=13% Similarity=0.170 Sum_probs=44.8
Q ss_pred cccchHHHHHHHHHHC-CCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccC
Q 029198 3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (197)
Q Consensus 3 atG~vG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~ 81 (197)
|+|.+|+..++.|.+. +.+++++.....+... ....... . +.....+ ++|+|+.+..
T Consensus 10 G~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~---------------~~~~~~~--~---~~~~~~~--~~D~Vvi~tp 67 (170)
T d1f06a1 10 GYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT---------------KTPVFDV--A---DVDKHAD--DVDVLFLCMG 67 (170)
T ss_dssp CCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS---------------SSCEEEG--G---GGGGTTT--TCSEEEECSC
T ss_pred CChHHHHHHHHHHHhCCCcEEEEEEeccccccc---------------ccccccc--h---hhhhhcc--ccceEEEeCC
Confidence 5799999999999876 5787776665443211 1111111 1 1223344 8999987665
Q ss_pred CCccchHHHHHhCCCCCcEE
Q 029198 82 READEVEPILDALPNLEQFI 101 (197)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~v 101 (197)
.. ....-+..+++.-+++|
T Consensus 68 ~~-~h~~~a~~aL~aG~~vv 86 (170)
T d1f06a1 68 SA-TDIPEQAPKFAQFACTV 86 (170)
T ss_dssp TT-THHHHHHHHHTTTSEEE
T ss_pred Cc-ccHHHHHHHHHCCCcEE
Confidence 43 45666666677334554
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=88.15 E-value=0.25 Score=29.79 Aligned_cols=30 Identities=13% Similarity=0.156 Sum_probs=27.0
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
-|+|++|..++..|.+.|.+|..+.|.+.-
T Consensus 28 vGgG~ig~E~A~~l~~~g~~vt~i~~~~~~ 57 (121)
T d1mo9a2 28 VGGSKTAVEYGCFFNATGRRTVMLVRTEPL 57 (121)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred ECCCHHHHHHHHHHHhcchhheEeeccchh
Confidence 367999999999999999999999998654
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=88.01 E-value=0.18 Score=35.01 Aligned_cols=27 Identities=33% Similarity=0.562 Sum_probs=25.1
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGK 29 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~ 29 (197)
|+|.+|.+++.+|+++|++|.++.+.+
T Consensus 11 GaGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 11 GGGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 569999999999999999999999975
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.59 E-value=0.87 Score=29.43 Aligned_cols=17 Identities=12% Similarity=0.202 Sum_probs=12.3
Q ss_pred HhhhhccCccEEEeccCCC
Q 029198 65 KSSLSAKGFDVVYDINGRE 83 (197)
Q Consensus 65 ~~~~~~~~~d~vi~~a~~~ 83 (197)
.+... +.|+||.+.|..
T Consensus 77 ~~~~~--~aDivi~a~G~~ 93 (170)
T d1a4ia1 77 DEEVN--KGDILVVATGQP 93 (170)
T ss_dssp HHHHT--TCSEEEECCCCT
T ss_pred HHHHh--hccchhhccccc
Confidence 44455 889999888764
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=87.54 E-value=0.4 Score=31.51 Aligned_cols=90 Identities=13% Similarity=0.019 Sum_probs=57.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEee--------------------cC--CC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG--------------------DR--KD 60 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------d~--~~ 60 (197)
|.|-+|.+-++.....|.+|.+++.+....++. .+... .++.. ++ ..
T Consensus 36 GaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l---------~~l~~--~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~ 104 (183)
T d1l7da1 36 GVGVAGLQAIATAKRLGAVVMATDVRAATKEQV---------ESLGG--KFITVDDEAMKTAETAGGYAKEMGEEFRKKQ 104 (183)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH---------HHTTC--EECCC-----------------------CCH
T ss_pred cCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHH---------HHhhc--ceEEEeccccccccccccchhhcCHHHHHHH
Confidence 468899999999999999999999998774321 11111 11111 11 12
Q ss_pred HHHHHhhhhccCccEEEeccCCCc-----cchHHHHHhCCCCCcEEEEec
Q 029198 61 YDFVKSSLSAKGFDVVYDINGREA-----DEVEPILDALPNLEQFIYCSS 105 (197)
Q Consensus 61 ~~~l~~~~~~~~~d~vi~~a~~~~-----~~~~~ll~~~~~~~~~v~~Ss 105 (197)
.+.+.+.+. ..|.||-++-..- --++.+++.|+.-.=+|=++-
T Consensus 105 ~~~l~~~l~--~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvai 152 (183)
T d1l7da1 105 AEAVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV 152 (183)
T ss_dssp HHHHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred HHHHHHHHH--hhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEee
Confidence 445666666 8999998875432 126889999993334555553
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.41 E-value=0.23 Score=35.29 Aligned_cols=27 Identities=15% Similarity=0.210 Sum_probs=24.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGK 29 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~ 29 (197)
.||..|.+|+++|+.+|++|+.+.+..
T Consensus 44 SSGk~G~alA~~~~~~Ga~V~li~g~~ 70 (290)
T d1p9oa_ 44 SSGRRGATSAEAFLAAGYGVLFLYRAR 70 (290)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CchHHHHHHHHHHHHcCCEEEEEecCC
Confidence 589999999999999999999998764
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=86.30 E-value=0.11 Score=32.98 Aligned_cols=29 Identities=17% Similarity=0.140 Sum_probs=19.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|.+|+++++.|.+.++.+.+.+|++++
T Consensus 6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~ 34 (153)
T d2i76a2 6 GTGTLTRFFLECLKDRYEIGYILSRSIDR 34 (153)
T ss_dssp SCCHHHHHHHHTTC----CCCEECSSHHH
T ss_pred eCcHHHHHHHHHHHhCCCEEEEEeCChhh
Confidence 68999999999886544444577887665
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=86.16 E-value=1.2 Score=31.38 Aligned_cols=27 Identities=19% Similarity=0.250 Sum_probs=24.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGK 29 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~ 29 (197)
|.|.||+++++.|.+.|.+|++++-+.
T Consensus 43 GfGnVG~~~A~~L~e~Gakvv~vsD~~ 69 (293)
T d1hwxa1 43 GFGNVGLHSMRYLHRFGAKCVAVGESD 69 (293)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEEccc
Confidence 569999999999999999999988654
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=86.12 E-value=1.5 Score=28.94 Aligned_cols=92 Identities=12% Similarity=-0.076 Sum_probs=53.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCC--CCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL--PGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|++..+..+++.|.+.|++|.++...+++....- .............++.....+..+.+...+.++..++|+++.+.
T Consensus 10 G~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~ 89 (206)
T d1fmta2 10 GTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQADVMVVVA 89 (206)
T ss_dssp ECSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHTTCSEEEEES
T ss_pred CCCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhhhcceEEEeec
Confidence 4566788899999999999888775543321110 01111111122245667666666666677777777999988665
Q ss_pred CCCccchHHHHHhCC
Q 029198 81 GREADEVEPILDALP 95 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~ 95 (197)
... --...+++..+
T Consensus 90 ~~~-ii~~~il~~~k 103 (206)
T d1fmta2 90 YGL-ILPKAVLEMPR 103 (206)
T ss_dssp CCS-CCCHHHHHSST
T ss_pred ccc-ccchhhHhcCC
Confidence 532 22345555554
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=86.05 E-value=0.35 Score=32.81 Aligned_cols=27 Identities=26% Similarity=0.497 Sum_probs=25.0
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGK 29 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~ 29 (197)
|+|..|...+..|.++|++|.++.|..
T Consensus 13 GaGiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 13 GSGVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 569999999999999999999999964
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=85.85 E-value=0.19 Score=33.27 Aligned_cols=29 Identities=24% Similarity=0.409 Sum_probs=24.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCc
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (197)
|.||+|..++..| ++|++|++++-+++..
T Consensus 7 GlG~vGl~~a~~~-a~g~~V~g~Din~~~v 35 (196)
T d1dlja2 7 GSGYVGLSLGVLL-SLQNEVTIVDILPSKV 35 (196)
T ss_dssp CCSHHHHHHHHHH-TTTSEEEEECSCHHHH
T ss_pred CCChhHHHHHHHH-HCCCcEEEEECCHHHH
Confidence 5899999998755 6799999999887653
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=85.51 E-value=0.35 Score=34.39 Aligned_cols=28 Identities=29% Similarity=0.522 Sum_probs=21.7
Q ss_pred CCcc-cch--HHHHHHHHHHCCCeEEEEecC
Q 029198 1 MGGT-RFI--GVFLSRLLVKEGHQVTLFTRG 28 (197)
Q Consensus 1 tGat-G~v--G~~l~~~L~~~g~~V~~~~r~ 28 (197)
|||| |.+ +.+|+++|.++||+|..++..
T Consensus 7 ~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 7 AGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred cCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 4666 555 557999999999999988754
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=85.20 E-value=0.34 Score=33.58 Aligned_cols=28 Identities=21% Similarity=0.246 Sum_probs=25.4
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA 30 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~ 30 (197)
|+|..|..++.+|.++|++|+++.+...
T Consensus 10 GaGi~Gls~A~~La~~G~~V~viE~~~~ 37 (281)
T d2gf3a1 10 GAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (281)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 5699999999999999999999998654
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.62 E-value=1.2 Score=29.64 Aligned_cols=87 Identities=17% Similarity=0.034 Sum_probs=47.7
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEe------ecCCCHHHHHhhhhccCccEE
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK------GDRKDYDFVKSSLSAKGFDVV 76 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~~~~l~~~~~~~~~d~v 76 (197)
|++..|..+++.|.+.|++|.++...+++.... ..........++..+. -+..+++.+. .+++.++|++
T Consensus 7 G~~~~~~~~l~~L~~~~~~i~~V~t~p~~~~~~----~~v~~~a~~~~ipv~~~~~~~~~~~~~~~~~~-~l~~~~~Dli 81 (203)
T d2bw0a2 7 GQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKA----DPLGLEAEKDGVPVFKYSRWRAKGQALPDVVA-KYQALGAELN 81 (203)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEECCCCSSCC----CHHHHHHHHHTCCEEECSCCEETTEECHHHHH-HHHTTCCSEE
T ss_pred cCCHHHHHHHHHHHHCCCcEEEEEcCCCcCcCC----ChhhhhHHhcCCcccccccccccccccHHHHH-HHHHhCCCce
Confidence 567789999999999999999877544332111 0011111112233332 2334455444 4455689999
Q ss_pred EeccCCCccchHHHHHhCC
Q 029198 77 YDINGREADEVEPILDALP 95 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~ 95 (197)
+.+... .--.+++++..+
T Consensus 82 v~~~~~-~ii~~~~l~~~~ 99 (203)
T d2bw0a2 82 VLPFCS-QFIPMEIISAPR 99 (203)
T ss_dssp EESSCS-SCCCHHHHTCST
T ss_pred EEeecc-hhhhhhhhhhhh
Confidence 876543 222345555554
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=84.49 E-value=0.47 Score=31.41 Aligned_cols=76 Identities=14% Similarity=0.143 Sum_probs=50.6
Q ss_pred CCcccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|-|+|....++++.+ . +.+|+++++++...... ...+.....++.++.++..+...+..-+....+|.|+.-.
T Consensus 31 t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a-----~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~Dl 103 (192)
T d1m6ya2 31 TVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIA-----EEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDL 103 (192)
T ss_dssp TCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHH-----HHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEEC
T ss_pred cCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHH-----HHhhccccccccchhHHHhhHHHHHHHcCCCCcceeeecc
Confidence 346666667777766 3 46899999997764211 0122233467999999998877665555445899998766
Q ss_pred CCC
Q 029198 81 GRE 83 (197)
Q Consensus 81 ~~~ 83 (197)
|.+
T Consensus 104 GvS 106 (192)
T d1m6ya2 104 GVS 106 (192)
T ss_dssp SCC
T ss_pred chh
Confidence 664
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.35 E-value=0.37 Score=32.20 Aligned_cols=29 Identities=28% Similarity=0.347 Sum_probs=26.2
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|.-|...+..|+++|++|.++.+++.-
T Consensus 12 GaG~~Gl~~A~~La~~G~~V~vlE~~~~~ 40 (297)
T d2bcgg1 12 GTGITECILSGLLSVDGKKVLHIDKQDHY 40 (297)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 67999999999999999999999997643
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=84.27 E-value=1.5 Score=28.12 Aligned_cols=97 Identities=19% Similarity=0.097 Sum_probs=53.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccC--------CCCCCCchhhhhcc-----CceEEEeecCCCHHHHHhhhh
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--------QLPGESDQEFAEFS-----SKILHLKGDRKDYDFVKSSLS 69 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~l~~~~~ 69 (197)
|-|.+|+.+.+.|.+++.+|+++.-.. ..+. ...+.......... .+-.+....-.+++++...-
T Consensus 7 GfGRIGR~~~R~l~~~~i~iv~INd~~-~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~i~W~~- 84 (168)
T d2g82a1 7 GFGRIGRQVFRILHSRGVEVALINDLT-DNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEIPWAE- 84 (168)
T ss_dssp CCSHHHHHHHHHHHHHTCCEEEEECSS-CHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGCCTGG-
T ss_pred CCcHHHHHHHHHHhcCCCEEEEECCCc-chhhhhheeecccccCccccccccccceeEecceeEEEEecCChHHCcccc-
Confidence 458899999999999999988887542 2110 00010000000000 11111222334555554433
Q ss_pred ccCccEEEeccCCCccchHHHHHhCC-CCCcEEEE
Q 029198 70 AKGFDVVYDINGREADEVEPILDALP-NLEQFIYC 103 (197)
Q Consensus 70 ~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~ 103 (197)
.++|+|+-|.|... ..+.+-..+. +.+++|..
T Consensus 85 -~gvdiViEcTG~f~-~~~~~~~hl~~gakkViiS 117 (168)
T d2g82a1 85 -AGVGVVIESTGVFT-DADKAKAHLEGGAKKVIIT 117 (168)
T ss_dssp -GTEEEEEECSSSCC-BHHHHTHHHHTTCSEEEES
T ss_pred -cCCceeEecccccc-chHHhhhhhccccceeeec
Confidence 38999999999763 3334444445 78888763
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=83.24 E-value=1.1 Score=28.30 Aligned_cols=30 Identities=27% Similarity=0.302 Sum_probs=25.2
Q ss_pred CCcccchHHHHHHHHHHC--CCeEEEEecCCC
Q 029198 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKA 30 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~--g~~V~~~~r~~~ 30 (197)
+|+||-||...++-+.+. .++|++++-...
T Consensus 8 lGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N 39 (150)
T d1r0ka2 8 LGATGSIGHSTLDLIERNLDRYQVIALTANRN 39 (150)
T ss_dssp ETTTSHHHHHHHHHHHHTGGGEEEEEEEESSC
T ss_pred ECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCC
Confidence 599999999999999775 478999887654
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=82.84 E-value=0.42 Score=30.40 Aligned_cols=30 Identities=23% Similarity=0.283 Sum_probs=24.4
Q ss_pred CCcccchHHHHHHHHHHCC-CeEEEEecCCCC
Q 029198 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP 31 (197)
Q Consensus 1 tGatG~vG~~l~~~L~~~g-~~V~~~~r~~~~ 31 (197)
+|+ |.+|+.++..|...+ .++++++.+++.
T Consensus 13 IGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~ 43 (154)
T d1pzga1 13 IGS-GMIGGTMGYLCALRELADVVLYDVVKGM 43 (154)
T ss_dssp ECC-SHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred ECC-CHHHHHHHHHHHhCCCceEEEEEecccc
Confidence 365 999999999888877 489999887654
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=82.82 E-value=0.31 Score=30.05 Aligned_cols=78 Identities=12% Similarity=0.069 Sum_probs=49.2
Q ss_pred CCcc---cchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEE
Q 029198 1 MGGT---RFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (197)
Q Consensus 1 tGat---G~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~v 76 (197)
+||| +..|..+++.|.+.| ++|+.+..+.+... +... .-++.| +-. .+|.+
T Consensus 14 VGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~----------------G~~~-y~sl~d------lp~--~vDlv 68 (129)
T d2csua1 14 IGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ----------------GVKA-YKSVKD------IPD--EIDLA 68 (129)
T ss_dssp ETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET----------------TEEC-BSSTTS------CSS--CCSEE
T ss_pred EccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC----------------CeEe-ecchhh------cCC--CCceE
Confidence 3776 889999999998766 69999977644321 1111 112232 222 78888
Q ss_pred EeccCCCccchHHHHHhCC--CCCcEEEEec
Q 029198 77 YDINGREADEVEPILDALP--NLEQFIYCSS 105 (197)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~--~~~~~v~~Ss 105 (197)
+-+.. ...+..+++.+. +++.++.+|+
T Consensus 69 vi~vp--~~~~~~~~~~~~~~g~~~~vi~s~ 97 (129)
T d2csua1 69 IIVVP--KRFVKDTLIQCGEKGVKGVVIITA 97 (129)
T ss_dssp EECSC--HHHHHHHHHHHHHHTCCEEEECCC
T ss_pred EEecC--hHHhHHHHHHHHHcCCCEEEEecc
Confidence 75542 345556666655 8888887776
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.76 E-value=0.33 Score=36.49 Aligned_cols=75 Identities=13% Similarity=0.167 Sum_probs=46.3
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCCccC---C-C-CC----CC-----chhhhhccCce--EEEeecCCCHHHHH
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQ---Q-L-PG----ES-----DQEFAEFSSKI--LHLKGDRKDYDFVK 65 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~-~-~~----~~-----~~~~~~~~~~~--~~~~~d~~~~~~l~ 65 (197)
|.|.+|.+++..|+..|. ++.+++...-.... + + .. .. ...+.+.++.+ ..+..++.+.. .
T Consensus 44 G~GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~~~~--~ 121 (426)
T d1yovb1 44 GAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFN--D 121 (426)
T ss_dssp CSSTTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSCGGGBC--H
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeeccccchH--H
Confidence 568899999999999996 89999987543321 1 1 10 00 11223445554 44445555433 3
Q ss_pred hhhhccCccEEEeccC
Q 029198 66 SSLSAKGFDVVYDING 81 (197)
Q Consensus 66 ~~~~~~~~d~vi~~a~ 81 (197)
..++ ++|+|+.+.-
T Consensus 122 ~~~~--~~DlVi~~~D 135 (426)
T d1yovb1 122 TFYR--QFHIIVCGLD 135 (426)
T ss_dssp HHHT--TCSEEEECCS
T ss_pred HHHH--hcchheeccC
Confidence 5566 8999997764
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=82.66 E-value=0.22 Score=30.61 Aligned_cols=83 Identities=10% Similarity=0.092 Sum_probs=50.6
Q ss_pred cccchHHHHHHHHHH-CCCeEEEEecCCCCcc-CCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEecc
Q 029198 3 GTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (197)
Q Consensus 3 atG~vG~~l~~~L~~-~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a 80 (197)
|+|..|..+++.+.. .+++++++.-..+... +.+ .++.++. .+.+.+...+ .++..+-+.
T Consensus 10 GaG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I------------~Gi~V~~-----~~~l~~~~~~-~i~iai~~i 71 (126)
T d2dt5a2 10 GMGRLGSALADYPGFGESFELRGFFDVDPEKVGRPV------------RGGVIEH-----VDLLPQRVPG-RIEIALLTV 71 (126)
T ss_dssp CCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEE------------TTEEEEE-----GGGHHHHSTT-TCCEEEECS
T ss_pred cCCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEE------------CCEEEec-----HHHHHHHHhh-cccEEEEeC
Confidence 679999999998754 4688888877655422 111 3455542 2345555542 566555443
Q ss_pred CCCccchHHHHHhCC--CCCcEEEEec
Q 029198 81 GREADEVEPILDALP--NLEQFIYCSS 105 (197)
Q Consensus 81 ~~~~~~~~~ll~~~~--~~~~~v~~Ss 105 (197)
+....+.+++.+. +++.+..++.
T Consensus 72 --~~~~~~~I~d~l~~~gIk~I~~f~~ 96 (126)
T d2dt5a2 72 --PREAAQKAADLLVAAGIKGILNFAP 96 (126)
T ss_dssp --CHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred --CHHHHHHHHHHHHHcCCCEEeecCc
Confidence 2345566777766 7777776654
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=82.51 E-value=0.63 Score=30.38 Aligned_cols=29 Identities=31% Similarity=0.369 Sum_probs=26.3
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|+|..|..-+..|.++||+|+++.+.+..
T Consensus 50 GaGPAGL~AA~~la~~G~~Vtl~E~~~~~ 78 (179)
T d1ps9a3 50 GAGPAGLAFAINAAARGHQVTLFDAHSEI 78 (179)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CccHHHHHHHHHHHhhccceEEEeccCcc
Confidence 57999999999999999999999997654
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=82.48 E-value=2 Score=30.12 Aligned_cols=28 Identities=21% Similarity=0.343 Sum_probs=23.9
Q ss_pred CcccchHHHHHHHHHHCCCeEEEEecCC
Q 029198 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGK 29 (197)
Q Consensus 2 GatG~vG~~l~~~L~~~g~~V~~~~r~~ 29 (197)
||.+..-..+++.|.++||+|.++++..
T Consensus 13 GG~e~~~~~la~~L~~~G~~V~v~~~~~ 40 (370)
T d2iw1a1 13 GGLQRDFMRIASTVAARGHHVRVYTQSW 40 (370)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEESEE
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 6777777889999999999999998753
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=82.29 E-value=0.57 Score=31.89 Aligned_cols=29 Identities=24% Similarity=0.476 Sum_probs=25.9
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~ 31 (197)
|.|..|..++..|.++|++|+++.|++..
T Consensus 11 GaG~aGl~~A~~L~~~G~~v~v~Er~~~~ 39 (265)
T d2voua1 11 GGSISGLTAALMLRDAGVDVDVYERSPQP 39 (265)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 56999999999999999999999987553
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.33 E-value=0.3 Score=31.52 Aligned_cols=72 Identities=10% Similarity=-0.035 Sum_probs=47.6
Q ss_pred cccchHHHHHHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCC
Q 029198 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~ 82 (197)
|.|.+|+.+++.|...|.+|.+....+....+ ....++... .+++++. ..|+|+-+.|-
T Consensus 31 GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~-----------A~~dG~~v~--------~~~~a~~--~adivvtaTGn 89 (163)
T d1li4a1 31 GYGDVGKGCAQALRGFGARVIITEIDPINALQ-----------AAMEGYEVT--------TMDEACQ--EGNIFVTTTGC 89 (163)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH-----------HHHTTCEEC--------CHHHHTT--TCSEEEECSSC
T ss_pred ccccccHHHHHHHHhCCCeeEeeecccchhHH-----------hhcCceEee--------ehhhhhh--hccEEEecCCC
Confidence 67999999999999999999999997644211 001122222 2455565 78888877765
Q ss_pred CccchHHHHHhCC
Q 029198 83 EADEVEPILDALP 95 (197)
Q Consensus 83 ~~~~~~~ll~~~~ 95 (197)
...-...-++.|+
T Consensus 90 ~~vI~~eh~~~MK 102 (163)
T d1li4a1 90 IDIILGRHFEQMK 102 (163)
T ss_dssp SCSBCHHHHTTCC
T ss_pred ccchhHHHHHhcc
Confidence 4334555666666
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=81.26 E-value=2.1 Score=27.56 Aligned_cols=90 Identities=13% Similarity=0.060 Sum_probs=48.9
Q ss_pred cccchHHHHHHHHHHCC-CeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHH-----------HHHhhhhc
Q 029198 3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-----------FVKSSLSA 70 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----------~l~~~~~~ 70 (197)
|.|.||+.+++.|.++. .+|+++.-..+..... .+.. .++..+..+..... .+..+.+
T Consensus 9 GfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~-------~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 78 (172)
T d2czca2 9 GYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAY-------RAKE--LGIPVYAASEEFIPRFEKEGFEVAGTLNDLLE- 78 (172)
T ss_dssp CCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHH-------HHHH--TTCCEEESSGGGHHHHHHHTCCCSCBHHHHHT-
T ss_pred CCCHHHHHHHHHHHhCCCceEEEEecCCChHHHH-------Hhhh--cCceeecccccceeeecccCccccchhhhhhc-
Confidence 56999999999998775 5788776533321100 0010 11222222222111 2223333
Q ss_pred cCccEEEeccCCCccchHHHHHhCC-CCCcEEEEec
Q 029198 71 KGFDVVYDINGREADEVEPILDALP-NLEQFIYCSS 105 (197)
Q Consensus 71 ~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss 105 (197)
++|+|+-|.|.. ...+++-..+. +. +.|.+|+
T Consensus 79 -~vDvViEcTG~f-~~~~~~~~hl~~G~-k~Vi~s~ 111 (172)
T d2czca2 79 -KVDIIVDATPGG-IGAKNKPLYEKAGV-KAIFQGG 111 (172)
T ss_dssp -TCSEEEECCSTT-HHHHHHHHHHHHTC-EEEECTT
T ss_pred -cCCEEEECCCCC-CCHHHHHHHHHcCC-CEEEECC
Confidence 899999999875 23444555555 75 4555554
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.07 E-value=0.4 Score=37.09 Aligned_cols=104 Identities=15% Similarity=0.138 Sum_probs=62.1
Q ss_pred cccchHHHHHHHHHHCC-CeEEEEecCCCCccC----CCC-----CCC-----chhhhhccCceEEEeecCCCHHHH---
Q 029198 3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQ----QLP-----GES-----DQEFAEFSSKILHLKGDRKDYDFV--- 64 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g-~~V~~~~r~~~~~~~----~~~-----~~~-----~~~~~~~~~~~~~~~~d~~~~~~l--- 64 (197)
|+|.+|.++++.|+..| .++++++...-.... .+- +.. ...+.+.++.+.+...+- +++.+
T Consensus 32 G~gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~-~~~~~~~~ 110 (529)
T d1yova1 32 NATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE-SPENLLDN 110 (529)
T ss_dssp CCSHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESS-CHHHHHHS
T ss_pred CCCHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcC-Cchhhhhh
Confidence 45789999999999999 488888775433211 111 111 122455566544332221 23222
Q ss_pred -HhhhhccCccEEEeccCCCccchHHHHHhCC-CCCcEEEEecceecc
Q 029198 65 -KSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (197)
Q Consensus 65 -~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~v~~Ss~~vyg 110 (197)
...+. ++|+|+.+.. +......+-+.|+ ....+|..++.+.||
T Consensus 111 ~~~~~~--~~dvVv~~~~-~~~~~~~l~~~c~~~~ip~i~~~~~G~~G 155 (529)
T d1yova1 111 DPSFFC--RFTVVVATQL-PESTSLRLADVLWNSQIPLLICRTYGLVG 155 (529)
T ss_dssp CGGGGG--GCSEEEEESC-CHHHHHHHHHHHHHHTCCEEEEEEETTEE
T ss_pred HHHHhc--CCCEEEECCC-CHHHHHHHHHHHHHcCCCEEEEeccCCEE
Confidence 23455 7999997653 3344445667777 456799998888877
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=80.90 E-value=1.4 Score=28.64 Aligned_cols=65 Identities=12% Similarity=0.158 Sum_probs=44.0
Q ss_pred HHHHHHCCCeEEEEecCCCCccCCCCCCCchhhhhccCceEEEeecCCCHHHHHhhhhccCccEEEeccCCCc
Q 029198 12 SRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREA 84 (197)
Q Consensus 12 ~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~d~vi~~a~~~~ 84 (197)
...+++++.+|++++|.+....... ....+++.++..+..+.+.........++|.|+.-.|.+.
T Consensus 33 s~~iL~~~~~viaiD~D~~ai~~a~--------~~~~~~~~~~~~~f~~~~~~l~~~~~~~vdgIl~DLGvSs 97 (182)
T d1wg8a2 33 ARGILERGGRVIGLDQDPEAVARAK--------GLHLPGLTVVQGNFRHLKRHLAALGVERVDGILADLGVSS 97 (182)
T ss_dssp HHHHHHTTCEEEEEESCHHHHHHHH--------HTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEECSCCH
T ss_pred HHHHhcccCcEEEEhhhhhHHHHHh--------hccccceeEeehHHHHHHHHHHHcCCCccCEEEEEccCCH
Confidence 4555667779999999987532100 0013579999999998776655544447999997777653
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=80.57 E-value=0.75 Score=29.72 Aligned_cols=29 Identities=17% Similarity=0.314 Sum_probs=25.3
Q ss_pred cccchHHHHHHHHHHCCC-eEEEEecCCCC
Q 029198 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP 31 (197)
Q Consensus 3 atG~vG~~l~~~L~~~g~-~V~~~~r~~~~ 31 (197)
|+|..|...+..|.+.|+ +|+++.|++..
T Consensus 11 GaGpaGl~aA~~l~~~G~~~V~v~E~~~~~ 40 (196)
T d1gtea4 11 GAGPASISCASFLARLGYSDITIFEKQEYV 40 (196)
T ss_dssp CCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CChHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence 569999999999999998 59999987654
|