Citrus Sinensis ID: 029221
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 197 | ||||||
| 356499538 | 266 | PREDICTED: trans-2,3-enoyl-CoA reductase | 1.0 | 0.740 | 0.663 | 1e-73 | |
| 255637551 | 266 | unknown [Glycine max] | 1.0 | 0.740 | 0.653 | 4e-73 | |
| 225461846 | 259 | PREDICTED: trans-2,3-enoyl-CoA reductase | 0.994 | 0.756 | 0.681 | 4e-72 | |
| 225449809 | 258 | PREDICTED: trans-2,3-enoyl-CoA reductase | 1.0 | 0.763 | 0.648 | 1e-70 | |
| 388518111 | 268 | unknown [Medicago truncatula] | 1.0 | 0.735 | 0.638 | 3e-70 | |
| 357497777 | 270 | 3-oxo-5-alpha-steroid 4-dehydrogenase [M | 1.0 | 0.729 | 0.643 | 5e-70 | |
| 225449807 | 224 | PREDICTED: 3-oxo-5-alpha-steroid 4-dehyd | 1.0 | 0.879 | 0.638 | 1e-69 | |
| 298205124 | 199 | unnamed protein product [Vitis vinifera] | 1.0 | 0.989 | 0.638 | 1e-69 | |
| 225449811 | 243 | PREDICTED: trans-2,3-enoyl-CoA reductase | 1.0 | 0.810 | 0.668 | 1e-68 | |
| 224113361 | 268 | predicted protein [Populus trichocarpa] | 1.0 | 0.735 | 0.615 | 2e-68 |
| >gi|356499538|ref|XP_003518596.1| PREDICTED: trans-2,3-enoyl-CoA reductase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/199 (66%), Positives = 163/199 (81%), Gaps = 2/199 (1%)
Query: 1 MLFLYTPSFLAGLASFWLFPHEGFRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAI 60
ML LYTP+FLAGLASFW+FPH+G R LL SA+T+HFFKR+ EV+FIHKYS M+LDSAI
Sbjct: 68 MLLLYTPAFLAGLASFWIFPHQGLRSTLLQSAVTLHFFKRVFEVVFIHKYSGAMLLDSAI 127
Query: 61 VISLSYLISTAAMIYVQ--SEGLGEPTIDLKFLGMILFLLGISGNFYHHNLLSKMRRNGE 118
I+LSY +STA MIY Q ++GL EP IDL + G++LF++GI GNFYHH LLS +R GE
Sbjct: 128 PITLSYFLSTATMIYAQHLTQGLPEPPIDLLYPGIVLFVVGIIGNFYHHYLLSNLRGKGE 187
Query: 119 KEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWY 178
KEYKIP G+F+ V+CPHYLFEI+ F+G FI+QTLYAF + +G T YL+GRSY+TR WY
Sbjct: 188 KEYKIPKGGMFELVICPHYLFEIIEFYGFSFISQTLYAFSFTVGTTLYLLGRSYSTRKWY 247
Query: 179 LSKFEDFPKHVKSIFPYIF 197
LSKFEDFPK VK+I P++F
Sbjct: 248 LSKFEDFPKDVKAIIPFVF 266
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255637551|gb|ACU19102.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|225461846|ref|XP_002285664.1| PREDICTED: trans-2,3-enoyl-CoA reductase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225449809|ref|XP_002275776.1| PREDICTED: trans-2,3-enoyl-CoA reductase [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|388518111|gb|AFK47117.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357497777|ref|XP_003619177.1| 3-oxo-5-alpha-steroid 4-dehydrogenase [Medicago truncatula] gi|355494192|gb|AES75395.1| 3-oxo-5-alpha-steroid 4-dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|225449807|ref|XP_002272523.1| PREDICTED: 3-oxo-5-alpha-steroid 4-dehydrogenase 2-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|298205124|emb|CBI40645.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225449811|ref|XP_002275799.1| PREDICTED: trans-2,3-enoyl-CoA reductase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224113361|ref|XP_002316469.1| predicted protein [Populus trichocarpa] gi|222865509|gb|EEF02640.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 197 | ||||||
| TAIR|locus:2146112 | 268 | AT5G16010 "AT5G16010" [Arabido | 1.0 | 0.735 | 0.6 | 2.2e-66 | |
| UNIPROTKB|Q2QDF6 | 258 | DET2 "Steroid 5-alpha-reductas | 0.918 | 0.701 | 0.286 | 1.1e-16 | |
| DICTYBASE|DDB_G0270270 | 300 | gpsn2 "synaptic glycoprotein S | 0.827 | 0.543 | 0.307 | 4.7e-16 | |
| ZFIN|ZDB-GENE-050417-199 | 252 | srd5a2a "steroid-5-alpha-reduc | 0.949 | 0.742 | 0.279 | 1.6e-15 | |
| UNIPROTKB|F1NJM2 | 257 | LOC770453 "Uncharacterized pro | 0.944 | 0.723 | 0.268 | 2e-15 | |
| UNIPROTKB|F1PEK6 | 255 | SRD5A1 "Uncharacterized protei | 0.842 | 0.650 | 0.280 | 2e-15 | |
| WB|WBGene00000198 | 308 | art-1 [Caenorhabditis elegans | 0.969 | 0.620 | 0.294 | 2.8e-15 | |
| WB|WBGene00009635 | 243 | F42F12.3 [Caenorhabditis elega | 0.959 | 0.777 | 0.283 | 3.3e-15 | |
| UNIPROTKB|F1N8L2 | 308 | TECR "Uncharacterized protein" | 0.949 | 0.607 | 0.306 | 4.7e-15 | |
| UNIPROTKB|P31213 | 254 | SRD5A2 "3-oxo-5-alpha-steroid | 0.857 | 0.665 | 0.293 | 5.4e-15 |
| TAIR|locus:2146112 AT5G16010 "AT5G16010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 120/200 (60%), Positives = 158/200 (79%)
Query: 1 MLFLYTPSFLAGLASFWLFPHEGFRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAI 60
ML LYTP+FLA +SF++ P + RF+LL SAL +HFFKR+ EVLFIHKYS GM +DSA+
Sbjct: 69 MLLLYTPAFLAAASSFFVVPSDDLRFLLLKSALALHFFKRVFEVLFIHKYSGGMAIDSAL 128
Query: 61 VISLSYLISTAAMIYVQSEGLG--EPTIDLKFLGMILFLLGISGNFYHHNLLSKMRR-NG 117
IS SY STA M+Y Q+ LG EP+ D+K G+++F++GI GN YHH LL+K+R+ +G
Sbjct: 129 TISSSYFSSTALMLYSQNLTLGLTEPSFDMKLAGVVMFVVGIVGNLYHHVLLAKLRKEDG 188
Query: 118 EKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAW 177
+KEYKIP GLFD ++CPHYLFEIL FW F I+QT+Y+F +A+G YL+GRSYATR W
Sbjct: 189 KKEYKIPKGGLFDIIICPHYLFEILVFWSFFLISQTIYSFSFAMGTMLYLIGRSYATRTW 248
Query: 178 YLSKFEDFPKHVKSIFPYIF 197
YLSKF+DFPKH+K++ P++F
Sbjct: 249 YLSKFDDFPKHIKALIPFVF 268
|
|
| UNIPROTKB|Q2QDF6 DET2 "Steroid 5-alpha-reductase DET2" [Gossypium hirsutum (taxid:3635)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0270270 gpsn2 "synaptic glycoprotein SC2-like protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050417-199 srd5a2a "steroid-5-alpha-reductase, alpha polypeptide 2a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NJM2 LOC770453 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PEK6 SRD5A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| WB|WBGene00000198 art-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00009635 F42F12.3 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1N8L2 TECR "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P31213 SRD5A2 "3-oxo-5-alpha-steroid 4-dehydrogenase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 197 | |||
| pfam02544 | 150 | pfam02544, Steroid_dh, 3-oxo-5-alpha-steroid 4-deh | 4e-21 | |
| PLN02560 | 308 | PLN02560, PLN02560, enoyl-CoA reductase | 3e-13 | |
| PLN03164 | 323 | PLN03164, PLN03164, 3-oxo-5-alpha-steroid 4-dehydr | 2e-11 | |
| PLN02392 | 260 | PLN02392, PLN02392, probable steroid reductase DET | 5e-10 | |
| COG3752 | 272 | COG3752, COG3752, Steroid 5-alpha reductase family | 2e-04 | |
| pfam06966 | 235 | pfam06966, DUF1295, Protein of unknown function (D | 0.003 |
| >gnl|CDD|217095 pfam02544, Steroid_dh, 3-oxo-5-alpha-steroid 4-dehydrogenase | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 4e-21
Identities = 40/113 (35%), Positives = 59/113 (52%)
Query: 85 TIDLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGF 144
T +G+ LF+ G+ N +L +R+ G YKIP GLF+ V CP+Y EI+ +
Sbjct: 38 TDPRFLIGIGLFVTGMLINIKSDIILRTLRKPGNTGYKIPRGGLFELVSCPNYFGEIMEW 97
Query: 145 WGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPYIF 197
G +L A +A L R+ A WYL KFE +PK K++ P++F
Sbjct: 98 IGYALATWSLPALAFAFFTVCNLTPRAKAHHKWYLKKFEKYPKSRKALIPFVF 150
|
This family consists of 3-oxo-5-alpha-steroid 4-dehydrogenases, EC:1.3.99.5 Also known as Steroid 5-alpha-reductase, the reaction catalyzed by this enzyme is: 3-oxo-5-alpha-steroid + acceptor <=> 3-oxo-delta(4)-steroid + reduced acceptor. The Steroid 5-alpha-reductase enzyme is responsible for the formation of dihydrotestosterone, this hormone promotes the differentiation of male external genitalia and the prostate during fetal development. In humans mutations in this enzyme can cause a form of male pseudohermaphorditism in which the external genitalia and prostate fail to develop normally. A related enzyme is also found in plants is DET2, a steroid reductase from Arabidopsis. Mutations in this enzyme cause defects in light-regulated development. Length = 150 |
| >gnl|CDD|178174 PLN02560, PLN02560, enoyl-CoA reductase | Back alignment and domain information |
|---|
| >gnl|CDD|215610 PLN03164, PLN03164, 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|178015 PLN02392, PLN02392, probable steroid reductase DET2 | Back alignment and domain information |
|---|
| >gnl|CDD|226275 COG3752, COG3752, Steroid 5-alpha reductase family enzyme [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|219244 pfam06966, DUF1295, Protein of unknown function (DUF1295) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 197 | |||
| KOG1638 | 257 | consensus Steroid reductase [Lipid transport and m | 100.0 | |
| PLN02392 | 260 | probable steroid reductase DET2 | 100.0 | |
| PLN02560 | 308 | enoyl-CoA reductase | 100.0 | |
| PLN03164 | 323 | 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal | 100.0 | |
| KOG1639 | 297 | consensus Steroid reductase required for elongatio | 100.0 | |
| PF02544 | 150 | Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase | 100.0 | |
| KOG1640 | 304 | consensus Predicted steroid reductase [Lipid trans | 100.0 | |
| COG3752 | 272 | Steroid 5-alpha reductase family enzyme [General f | 99.78 | |
| PF06966 | 235 | DUF1295: Protein of unknown function (DUF1295); In | 99.78 | |
| KOG4650 | 311 | consensus Predicted steroid reductase [General fun | 99.37 | |
| PF01222 | 432 | ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 fam | 99.2 | |
| PF04191 | 106 | PEMT: Phospholipid methyltransferase ; InterPro: I | 98.92 | |
| KOG1435 | 428 | consensus Sterol reductase/lamin B receptor [Lipid | 98.81 | |
| COG2020 | 187 | STE14 Putative protein-S-isoprenylcysteine methylt | 98.76 | |
| PF04140 | 94 | ICMT: Isoprenylcysteine carboxyl methyltransferase | 98.24 | |
| KOG2628 | 201 | consensus Farnesyl cysteine-carboxyl methyltransfe | 97.37 | |
| COG1755 | 172 | Uncharacterized protein conserved in bacteria [Fun | 97.34 | |
| PLN02797 | 164 | phosphatidyl-N-dimethylethanolamine N-methyltransf | 90.71 |
| >KOG1638 consensus Steroid reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-56 Score=367.29 Aligned_cols=197 Identities=31% Similarity=0.511 Sum_probs=172.2
Q ss_pred CchhhhhHHHHHHHHhhhCCCc-chHHHHHHHHHHHHHHHHHHHHhhccccCCCcchhhHHHHHHHHHHhhhhhe-eec-
Q 029221 1 MLFLYTPSFLAGLASFWLFPHE-GFRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAIVISLSYLISTAAMI-YVQ- 77 (197)
Q Consensus 1 ~~~~~~p~~~~~~~~~~~~~~~-~~~~~~l~~l~~~Hy~rR~~E~~fv~~~s~~m~~~~~~~~~~~y~~~~~~~~-~~~- 77 (197)
|++||.|+|++|++.+...|+. .++..++..++++||.+|.+|++|+++.+++||+...++...+..+.+.+.+ |.+
T Consensus 56 w~iqe~Paf~~pl~~~~~~~~~~~~~~~~L~~~flvHYf~R~liypf~~~~~~~~p~~i~a~a~~F~~~NG~lqg~y~~~ 135 (257)
T KOG1638|consen 56 WFIQELPAFAIPLYSLFRGPSSDLPPGLLLLSAFLVHYFHRALIYPFLIRSSNPSPAIIVALAIAFCTLNGTLQGLYLSH 135 (257)
T ss_pred HHHhcCcHHHhhHHHhcCCCcccccccHHHHHHHHHHHHHHHHhheeeecCCCCccHHHHHHHHHHHHhhHHHHHHHHHh
Confidence 7899999999999988777744 3678899999999999999999999998888998777777666655433222 111
Q ss_pred cCCCCCchh--HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCcCccCcccccchhhHHHHHHHHHHHhhHHH
Q 029221 78 SEGLGEPTI--DLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLY 155 (197)
Q Consensus 78 ~~~~~~~~~--~~~~~g~~lf~~g~~~n~~~h~~L~~lR~~~~~~y~iP~gglF~~vscPnY~~Eil~w~g~~l~~~~~~ 155 (197)
-+..+|+.. .+..+|+.+|+.|+++|.++|.+|++|||+++++||||+||||+|||||||||||++|+|+++++++++
T Consensus 136 ~~~~~d~~~~~~r~liG~~lfv~Gm~iN~~sD~iL~~LRk~~~~~YkIP~GglFeyVsCPNYfgEiieW~Gyal~~ws~p 215 (257)
T KOG1638|consen 136 YQLYEDPWVTDIRFLIGVVLFVTGMLINIYSDNILRTLRKPGGKGYKIPRGGLFEYVSCPNYFGEIIEWIGYALASWSLP 215 (257)
T ss_pred cccccCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHhhcCCCCceecCCCceEEEeecchHHHHHHHHHHHHHHhhhHH
Confidence 111134332 367899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcceeecccC
Q 029221 156 AFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPYIF 197 (197)
Q Consensus 156 ~~~~~~~~~~~l~~~a~~~~~wY~~~F~~yp~~r~~lIPfi~ 197 (197)
++.|++++++|+.+||.++||||+|||+||||+|||+||||+
T Consensus 216 ~~aFa~ft~~~l~pRA~ahH~WY~~kFe~YPk~RkAlIPfvf 257 (257)
T KOG1638|consen 216 ALAFAFFTICNLGPRAYAHHKWYLKKFEDYPKNRKALIPFVF 257 (257)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhhccCCccceeeccccC
Confidence 999999999999999999999999999999999999999986
|
|
| >PLN02392 probable steroid reductase DET2 | Back alignment and domain information |
|---|
| >PLN02560 enoyl-CoA reductase | Back alignment and domain information |
|---|
| >PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional | Back alignment and domain information |
|---|
| >KOG1639 consensus Steroid reductase required for elongation of the very long chain fatty acids [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1 | Back alignment and domain information |
|---|
| >KOG1640 consensus Predicted steroid reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >COG3752 Steroid 5-alpha reductase family enzyme [General function prediction only] | Back alignment and domain information |
|---|
| >PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long | Back alignment and domain information |
|---|
| >KOG4650 consensus Predicted steroid reductase [General function prediction only] | Back alignment and domain information |
|---|
| >PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis | Back alignment and domain information |
|---|
| >PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2 | Back alignment and domain information |
|---|
| >KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2020 STE14 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF04140 ICMT: Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; InterPro: IPR007269 The isoprenylcysteine o-methyltransferase (2 | Back alignment and domain information |
|---|
| >KOG2628 consensus Farnesyl cysteine-carboxyl methyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG1755 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PLN02797 phosphatidyl-N-dimethylethanolamine N-methyltransferase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 197 | |||
| 4a2n_B | 194 | Isoprenylcysteine carboxyl methyltransferase; memb | 99.59 |
| >4a2n_B Isoprenylcysteine carboxyl methyltransferase; membrane protein, RAS and RHO gtpases signallin; HET: SAH PLM CDL; 3.40A {Methanosarcina acetivorans} | Back alignment and structure |
|---|
Probab=99.59 E-value=4.7e-15 Score=119.73 Aligned_cols=111 Identities=13% Similarity=0.184 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHh-ccc--CCCccccccCcCccCcccccchhhHHHHHHHHHHHhhHHHHHHH--H
Q 029221 86 IDLKFLGMILFLLGISGNFYHHNLLSK-MRR--NGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCY--A 160 (197)
Q Consensus 86 ~~~~~~g~~lf~~g~~~n~~~h~~L~~-lR~--~~~~~y~iP~gglF~~vscPnY~~Eil~w~g~~l~~~~~~~~~~--~ 160 (197)
.....+|+++++.|......++.+|.+ ++. +++++.++.++|+|+++|||||+||++.++|++++.+++..++. .
T Consensus 75 ~~~~~~G~~l~l~G~~l~~~a~~~Lg~~f~~~~~~~~~~~Lvt~G~y~~vRHP~Y~G~~l~~~g~~l~~~s~~~~~~~~~ 154 (194)
T 4a2n_B 75 DSIRLFALIVTFLNIGLFTKIHKDLGNNWSAILEIKDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILSNWVVLIFGIV 154 (194)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCSSCCEETTCCCCCSSTTTTBSSHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCeeeecCcchhccCccHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 356789999999999999999999954 443 34567899999999999999999999999999999888765432 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHh----cccCCCCcceeecccC
Q 029221 161 IGVTFYLMGRSYATRAWYLSK----FEDFPKHVKSIFPYIF 197 (197)
Q Consensus 161 ~~~~~~l~~~a~~~~~wY~~~----F~~yp~~r~~lIPfi~ 197 (197)
.++.. +..+....+++.+++ ++||.++.+++||+|.
T Consensus 155 ~~~~~-~~~ri~~EE~~L~~~fG~~Y~~Y~~rv~r~iP~i~ 194 (194)
T 4a2n_B 155 AWAIL-YFIRVPKEEELLIEEFGDEYIEYMGKTGRLFPKVV 194 (194)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHTHHHHHHHHHCBSSSCC--
T ss_pred HHHHH-HHHHHHHHHHHHHHHhCHHHHHHHHhCCeeCceeC
Confidence 22222 234444444445554 4678888889999974
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00