Citrus Sinensis ID: 029248

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
Protein Sequence
MAEKPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIEDGKKVAAA
Secondary Structure (PSIPRED)
cccccccEEEEEccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHccccccccccccEEEEEEEEEcccEEEEEEEccccccccHHHHHHHHHHHcccccEEEEccccccEEEEcccHHHHHHHHHHHHccccccccEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEccccccccHHHcccccHHHHHHHHHHHcHHHHHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccEEEEEEEcHHHccccHHHHHHHHHHHcccccEEEEccccccEEEEEcccHHHHHHHHHHHcccccHHHHEEHccccccccc
Coil and Loop (DISEMBL)
MAEKPQPVRVLYCSIcslpaeycefgpdfekckpwliknapelYPDLLKEANEKEAEKVSGQLqlfglssggadgatsgqtssskqeevkrlpggkikkkeRQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKkfatgasvvkgptekeqidvqgdISYDIVEFItdtwpavpeTAIYFIEdgkkvaaa
Flexible Loop (DISEMBL)
maekpqpvrVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLFGLSSGGADGAtsgqtssskqeevkrlpggkikkkerqevviekvvrnkrkcitivkgldlfgvKLSDASKKLGKkfatgasvvkgptekeqidvqgDISYDIVEFITDTWPAVPETAIYFIEdgkkvaaa
Low Complexity Region (SEG)
MAEKPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLkeanekeaekVsgqlqlfglssggADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIEDGKKVAAA
Disordered region (IsUnstruct)
*******VRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLL********************************************************VVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVK*****EQIDVQGDISYDIVEFITDTWPAVPETAIYFIED*******
Disordered Region (DISOPRED)
****PQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLK**********************************************************EKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI**GKK****
Disordered Region (DISEMBL)
MAEKPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLFGLSSG********************LPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIEDGKKVAAA
Disordered Region (DISPRO)
****PQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAE******************************************KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIEDG******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEKPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIEDGKKVAAA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	196	2.2.26 [Sep-21-2011]
O42929	190	Translation machinery-ass	yes	no	0.913	0.942	0.385	4e-29
Q2TVZ2	194	Translation machinery-ass	yes	no	0.903	0.912	0.361	9e-28
Q9P3T4	187	Translation machinery-ass	N/A	no	0.862	0.903	0.386	5e-27
Q4WBL6	194	Translation machinery-ass	yes	no	0.903	0.912	0.377	8e-27
Q2H5Z7	188	Translation machinery-ass	N/A	no	0.938	0.978	0.386	9e-27
A1DAY1	194	Translation machinery-ass	N/A	no	0.918	0.927	0.371	1e-26
A1C8E3	194	Translation machinery-ass	N/A	no	0.948	0.958	0.348	1e-26
A2QHG9	197	Translation machinery-ass	yes	no	0.928	0.923	0.36	1e-26
Q1E556	200	Translation machinery-ass	N/A	no	0.897	0.88	0.342	7e-26
A4QVI3	201	Translation machinery-ass	N/A	no	0.897	0.875	0.361	3e-25

>sp|O42929|DENR_SCHPO Translation machinery-associated protein 22 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tma22 PE=3 SV=1

 Score =  127 bits (320), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 8/187 (4%)

Query: 5   PQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQ 64
           P+   VLYC +C+LP EYCEF    +KCK WL  + P++Y  L  E +      +S  L+
Sbjct: 7   PKLKSVLYCDVCTLPVEYCEFEGTLKKCKEWLKSSHPDVYDKLYGEQD------LSKDLE 60

Query: 65  LFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGL 124
                SG  D  ++ +   +K  + ++    +  K+   +V+I+ + R KRK +T V+GL
Sbjct: 61  NTLNVSGTKD--SNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQGL 118

Query: 125 DLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAI 184
           D FG++   A+K L  KFATGASV K   +K++I VQGD++YDI +FI + +  VPE  I
Sbjct: 119 DAFGIETKKAAKMLANKFATGASVTKTADKKDEIVVQGDLNYDIFDFILEKFKEVPEDNI 178

Query: 185 YFIEDGK 191
             +ED K
Sbjct: 179 KIVEDTK 185

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q2TVZ2|DENR_ASPOR Translation machinery-associated protein 22 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=tma22 PE=3 SV=1

 Score =  123 bits (308), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 106/188 (56%), Gaps = 11/188 (5%)

Query: 6   QPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQL 65
           Q   V+YC +C+LP EYCEFG   +KC+ WL +  PELY  L  E      E +S  L  
Sbjct: 13  QARHVVYCGVCTLPPEYCEFGGTAKKCEEWLKEKQPELYQRLHSE------EAISANLST 66

Query: 66  FGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLD 125
             +S+       + +  +       R      ++K   +V I++V RNKRK +T++ GL+
Sbjct: 67  LSISAQERAAKDAAKKEAKAALAEAR----DAERKAASKVQIKRVERNKRKHVTVIAGLE 122

Query: 126 LFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PAVPETAI 184
           ++G++    +K+LGKKFATG+SV +     E+I VQGD+S D+ +++ + +   +PE  I
Sbjct: 123 VYGLENKKVAKELGKKFATGSSVTRSAAGNEEITVQGDVSDDVQDWLLEVYGKEIPEANI 182

Query: 185 YFIEDGKK 192
             IED KK
Sbjct: 183 EIIEDKKK 190

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)

>sp|Q9P3T4|DENR_NEUCR Translation machinery-associated protein 22 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=tma-22 PE=3 SV=1

 Score =  120 bits (302), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 100/181 (55%), Gaps = 12/181 (6%)

Query: 10  VLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLK-EANEKEAEKVSGQLQLFGL 68
           V+YC +CSLP EYCE+G   +KC+ WL KN P +Y  +   E  E E   +S + Q   +
Sbjct: 9   VVYCGVCSLPPEYCEYGGTVKKCQQWLEKNQPTMYSRIWSPEVLEAEMASLSVEAQERAM 68

Query: 69  SSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDLFG 128
                  A +      + +           K+    V I+++ RNKRK +T V GL+ FG
Sbjct: 69  KDAKKKAAKAEAAEQKQAD-----------KRANSVVTIKRIERNKRKYVTSVSGLEAFG 117

Query: 129 VKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE 188
           ++L   +K  GKKFATG+SV K P+  E+I VQGD+S +I EFI + +  VPE  I  +E
Sbjct: 118 LELKKVAKDFGKKFATGSSVTKVPSGGEEIVVQGDVSGEIEEFILEKYKEVPEDNIELVE 177

Query: 189 D 189
           D
Sbjct: 178 D 178

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

>sp|Q4WBL6|DENR_ASPFU Translation machinery-associated protein 22 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=tma22 PE=3 SV=2

 Score =  120 bits (300), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 104/188 (55%), Gaps = 11/188 (5%)

Query: 6   QPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQL 65
           Q  +V+YC +C+LP EYCEFG   +KC+ WL  N  ELY  L  E      E +S  L  
Sbjct: 13  QAKKVVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHAELYQRLYSE------EALSSNLSE 66

Query: 66  FGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLD 125
             +S        + +  +       R    K   K    V I++V RNKRK +T++ GL+
Sbjct: 67  LSVSVRERAAKDAAKKEAKAAAAEARDAERKAAAK----VQIKRVERNKRKHVTVITGLE 122

Query: 126 LFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PAVPETAI 184
           + G++    +K+LGKKFATG+SV K P   E+I VQGD+S D+ E++ + +   +PE+ I
Sbjct: 123 VHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVKEWLLELYGKEIPESNI 182

Query: 185 YFIEDGKK 192
             +ED KK
Sbjct: 183 ELVEDKKK 190

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

>sp|Q2H5Z7|DENR_CHAGB Translation machinery-associated protein 22 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=TMA22 PE=3 SV=1

 Score =  119 bits (299), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/199 (38%), Positives = 114/199 (57%), Gaps = 15/199 (7%)

Query: 1   MAEKPQPV--RVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLK-EANEKEAE 57
           MAE P PV   ++YC +C+LP EYCE+G   +KC+ WL K  P+LY  +   EA E    
Sbjct: 1   MAE-PTPVGREIIYCGVCTLPPEYCEYGGTTKKCQEWLEKKHPDLYARIWSPEALEAATA 59

Query: 58  KVSGQLQLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKC 117
            +S   Q     +       + +  +++Q+   +L         +  V I+++ RNKRK 
Sbjct: 60  SLSLAAQE---RAAKDAAKKAAKAEAAEQKHADKLA--------KSVVTIKRIERNKRKF 108

Query: 118 ITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWP 177
           +T V GL+ FG++L   +K  GKKFATGASV K P+  E+I VQGD+S +I EF+ + + 
Sbjct: 109 VTSVTGLEAFGLELKKVAKDFGKKFATGASVTKVPSGGEEIVVQGDVSGEIEEFLLEKYK 168

Query: 178 AVPETAIYFIEDGKKVAAA 196
            +PE  I  +ED KK A+A
Sbjct: 169 DIPEDNIELVEDKKKKASA 187

Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) (taxid: 306901)

>sp|A1DAY1|DENR_NEOFI Translation machinery-associated protein 22 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tma22 PE=3 SV=1

 Score =  119 bits (298), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 106/191 (55%), Gaps = 11/191 (5%)

Query: 6   QPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQL 65
           Q  +V+YC +C+LP EYCEFG   +KC+ WL  N  +LY  L  E      E +S  L  
Sbjct: 13  QAKQVVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHADLYQRLYSE------EALSSNLSE 66

Query: 66  FGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLD 125
             +S        + +  +       R    K   K    V I++V RNKRK +T++ GL+
Sbjct: 67  LSVSVRERAAKDAAKKEAKAAAAEARDAERKAAAK----VQIKRVERNKRKHVTVITGLE 122

Query: 126 LFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PAVPETAI 184
           + G++    +K+LGKKFATG+SV K P   E+I VQGD+S D+ E++ + +   +PE+ I
Sbjct: 123 VHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVQEWLLELYGKEIPESNI 182

Query: 185 YFIEDGKKVAA 195
             +ED KK A+
Sbjct: 183 ELVEDKKKKAS 193

Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117)

>sp|A1C8E3|DENR_ASPCL Translation machinery-associated protein 22 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=tma22 PE=3 SV=1

 Score =  119 bits (298), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 18/204 (8%)

Query: 1   MAEKPQPV-------RVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANE 53
           M E  QP        +++YC +C+LP EYCEFG   +KC+ WL  N  E Y  L  E   
Sbjct: 1   MGEIAQPAFFESKLKQIVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHEETYQRLYSE--- 57

Query: 54  KEAEKVSGQLQLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRN 113
              E +S  L    +S        + +  +       R      ++K   +V I++V RN
Sbjct: 58  ---EALSSNLSTLSVSVRERAAKDAAKKEAKAALAEAR----DAERKAAAKVQIKRVERN 110

Query: 114 KRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFIT 173
           KRK +T++ GL++ G++    +K+LGKKFATG+SV K P   E+I VQGD+S D+ E++ 
Sbjct: 111 KRKHVTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVQEWLL 170

Query: 174 DTW-PAVPETAIYFIEDGKKVAAA 196
           + +   +PE+ I  +ED KK +++
Sbjct: 171 EVYGKELPESNIELVEDKKKKSSS 194

Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612)

>sp|A2QHG9|DENR_ASPNC Translation machinery-associated protein 22 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tma22 PE=3 SV=1

 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 107/200 (53%), Gaps = 18/200 (9%)

Query: 1   MAEKPQPV-------RVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANE 53
           MAE  QPV        V+YC +C+LP EYCEFG   +KC+ WL    P++Y  L  E   
Sbjct: 1   MAEVAQPVPAESQAKHVVYCGVCTLPPEYCEFGGTAKKCEEWLKDAHPDMYQSLYSE--- 57

Query: 54  KEAEKVSGQLQLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRN 113
              E ++  L    +S+       + +  +       R    K   K    V I++V RN
Sbjct: 58  ---EALNSNLATLSVSARERAAKDAAKKEAKAAAAEARDAERKAASK----VQIKRVERN 110

Query: 114 KRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFIT 173
           KRK +T++ GLD++G++    +K LGKKFATG+S+ +     E+I VQGD+S D+ E++ 
Sbjct: 111 KRKHVTVITGLDIYGLENKKIAKDLGKKFATGSSMTRSAGGTEEITVQGDVSDDVKEWLL 170

Query: 174 DTW-PAVPETAIYFIEDGKK 192
           + +   +PE  I  IED KK
Sbjct: 171 EVYGKEIPEANIELIEDKKK 190

Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011)

>sp|Q1E556|DENR_COCIM Translation machinery-associated protein 22 OS=Coccidioides immitis (strain RS) GN=TMA22 PE=3 SV=1

 Score =  117 bits (292), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 106/187 (56%), Gaps = 11/187 (5%)

Query: 4   KPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQL 63
           +PQ   ++YC +CSLP EYCEFG   +KC+ WL +N P ++  L  E      E ++  L
Sbjct: 15  EPQARHIVYCGVCSLPPEYCEFGGTAKKCEEWLHENNPSMHQKLYSE------ETIAANL 68

Query: 64  QLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKG 123
               + +       + + ++ K+ +   +     ++K   +V I++V RNKRK +T++ G
Sbjct: 69  STLSIQAR----ERAAKDAAKKEAKAALVETRNQERKAAAKVQIKRVERNKRKHVTVIAG 124

Query: 124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PAVPET 182
           L+  G+     +K+LGKKFATG+SV K P   E+I VQGD+  D++E++ +     VPE 
Sbjct: 125 LEAHGLDNKKVAKELGKKFATGSSVTKNPAGGEEITVQGDVCEDVLEWLVEVHGKEVPED 184

Query: 183 AIYFIED 189
            +  +ED
Sbjct: 185 NLEIVED 191

Coccidioides immitis (strain RS) (taxid: 246410)

>sp|A4QVI3|DENR_MAGO7 Translation machinery-associated protein 22 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=TMA22 PE=3 SV=2

 Score =  114 bits (286), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 12/188 (6%)

Query: 5   PQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLK-EANEKEAEKVSGQL 63
           PQ   V YC +CSLP EYCE+G   +KC+ WL +N  E+Y  +   EA +     +S + 
Sbjct: 14  PQGREVTYCGVCSLPPEYCEYGGTVKKCQDWLQRNNQEMYDRIWSPEALQAATAALSVEA 73

Query: 64  QLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKG 123
           Q           A +    +   +++K+             V ++++ RNKRK +T V G
Sbjct: 74  QQRAEKDAKKKAAKAEAAEAKHADKLKK-----------SVVTVKRIERNKRKYVTSVSG 122

Query: 124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETA 183
           L+ FG++L   +K  GKKFATG+SV K  +  E+I VQGD+S +I EFI + +  VPE  
Sbjct: 123 LESFGLELKKVAKDFGKKFATGSSVTKVASGGEEIVVQGDVSDEIKEFIVEKYKDVPEDN 182

Query: 184 IYFIEDGK 191
           I  ++D K
Sbjct: 183 IELVDDKK 190

Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) (taxid: 242507)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
225429534	197	PREDICTED: translation machinery-associa	1.0	0.994	0.888	2e-95
224092186	200	predicted protein [Populus trichocarpa]	1.0	0.98	0.875	3e-94
225429532	199	PREDICTED: translation machinery-associa	1.0	0.984	0.874	1e-93
225444903	197	PREDICTED: translation machinery-associa	1.0	0.994	0.847	3e-91
224142891	200	predicted protein [Populus trichocarpa]	1.0	0.98	0.855	6e-91
449452514	193	PREDICTED: translation machinery-associa	0.984	1.0	0.836	1e-88
297807241	198	eukaryotic translation initiation factor	1.0	0.989	0.813	1e-87
22326739	198	Translation initiation factor SUI1 famil	1.0	0.989	0.813	2e-87
388499658	193	unknown [Lotus japonicus]	0.984	1.0	0.811	7e-86
356530370	194	PREDICTED: translation machinery-associa	0.989	1.0	0.811	2e-85

>gi|225429534|ref|XP_002279109.1| PREDICTED: translation machinery-associated protein 22 isoform 1 [Vitis vinifera] gi|296081652|emb|CBI20657.3| unnamed protein product [Vitis vinifera]

 Score =  353 bits (906), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 175/197 (88%), Positives = 188/197 (95%), Gaps = 1/197 (0%)

Query: 1   MAEKPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVS 60
           MAEKPQPVRVLYCS+CSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEA+EKEA+KVS
Sbjct: 1   MAEKPQPVRVLYCSVCSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEASEKEADKVS 60

Query: 61  GQLQLFGLSSG-GADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCIT 119
            QLQ  G+SSG G + A SG+TS+SKQEEVKRLPGGKIKKKE+QEV+IEKVVRNKRKCIT
Sbjct: 61  EQLQSVGISSGAGNETAPSGKTSTSKQEEVKRLPGGKIKKKEKQEVIIEKVVRNKRKCIT 120

Query: 120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAV 179
           IVKGLDLFGVKL DASKKLGKKFATGASVVKGPT+KEQIDVQGDISYDIVEF+TDTWP V
Sbjct: 121 IVKGLDLFGVKLGDASKKLGKKFATGASVVKGPTDKEQIDVQGDISYDIVEFVTDTWPDV 180

Query: 180 PETAIYFIEDGKKVAAA 196
           PETAIYFIEDG+KV+AA
Sbjct: 181 PETAIYFIEDGRKVSAA 197

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092186|ref|XP_002309499.1| predicted protein [Populus trichocarpa] gi|222855475|gb|EEE93022.1| predicted protein [Populus trichocarpa]

 Score =  349 bits (895), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 175/200 (87%), Positives = 185/200 (92%), Gaps = 4/200 (2%)

Query: 1   MAEKPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVS 60
           MAEKP+PV+VLYC +CSLPAEYCEFGPDFEKCKPWLI NAPELYPDLLKEANEKEAE+VS
Sbjct: 1   MAEKPEPVKVLYCPLCSLPAEYCEFGPDFEKCKPWLIINAPELYPDLLKEANEKEAERVS 60

Query: 61  GQLQLFGLSSGGADGATS----GQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRK 116
            QLQ  G+SS GADGA S    G TSSSKQEEVKRLPGGKIKKK RQEVVIEKVVRNKRK
Sbjct: 61  EQLQSAGISSSGADGAASFVQSGVTSSSKQEEVKRLPGGKIKKKARQEVVIEKVVRNKRK 120

Query: 117 CITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW 176
           CITI+KGLDLFG+KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YDIVEFIT+TW
Sbjct: 121 CITIIKGLDLFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFITETW 180

Query: 177 PAVPETAIYFIEDGKKVAAA 196
           P VPETAI+FIEDGKKV AA
Sbjct: 181 PDVPETAIFFIEDGKKVPAA 200

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429532|ref|XP_002279152.1| PREDICTED: translation machinery-associated protein 22 isoform 2 [Vitis vinifera]

 Score =  347 bits (891), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 174/199 (87%), Positives = 187/199 (93%), Gaps = 3/199 (1%)

Query: 1   MAEKPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVS 60
           MAEKPQPVRVLYCS+CSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEA+EKEA+KVS
Sbjct: 1   MAEKPQPVRVLYCSVCSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEASEKEADKVS 60

Query: 61  GQLQLFGLSSG-GADGATSG--QTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKC 117
            QLQ  G+SSG G + A S   +TS+SKQEEVKRLPGGKIKKKE+QEV+IEKVVRNKRKC
Sbjct: 61  EQLQSVGISSGAGNETAPSAARKTSTSKQEEVKRLPGGKIKKKEKQEVIIEKVVRNKRKC 120

Query: 118 ITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWP 177
           ITIVKGLDLFGVKL DASKKLGKKFATGASVVKGPT+KEQIDVQGDISYDIVEF+TDTWP
Sbjct: 121 ITIVKGLDLFGVKLGDASKKLGKKFATGASVVKGPTDKEQIDVQGDISYDIVEFVTDTWP 180

Query: 178 AVPETAIYFIEDGKKVAAA 196
            VPETAIYFIEDG+KV+AA
Sbjct: 181 DVPETAIYFIEDGRKVSAA 199

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444903|ref|XP_002281869.1| PREDICTED: translation machinery-associated protein 22 [Vitis vinifera] gi|297738660|emb|CBI27905.3| unnamed protein product [Vitis vinifera]

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 167/197 (84%), Positives = 183/197 (92%), Gaps = 1/197 (0%)

Query: 1   MAEKPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVS 60
           MAEKPQPVRVLYC +CSLPAEYCEFG DFEKCKPWLI+NAP+LYPDLLKEA+ KEA+KV+
Sbjct: 1   MAEKPQPVRVLYCQVCSLPAEYCEFGSDFEKCKPWLIQNAPDLYPDLLKEADSKEADKVA 60

Query: 61  GQLQLFGLSSGGADG-ATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCIT 119
            QLQ   LSSG ADG A SG  S+SKQEEVKRLPGGKIK+KE+QEVVIEK+VRNKRKCIT
Sbjct: 61  QQLQSTALSSGSADGSAPSGGASASKQEEVKRLPGGKIKRKEKQEVVIEKIVRNKRKCIT 120

Query: 120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAV 179
            VKGL+LFG+KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YDIVEFIT+TWP V
Sbjct: 121 TVKGLELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFITETWPDV 180

Query: 180 PETAIYFIEDGKKVAAA 196
           PETAI+FIEDG+KVAAA
Sbjct: 181 PETAIFFIEDGRKVAAA 197

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142891|ref|XP_002324767.1| predicted protein [Populus trichocarpa] gi|222866201|gb|EEF03332.1| predicted protein [Populus trichocarpa]

 Score =  338 bits (867), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 171/200 (85%), Positives = 181/200 (90%), Gaps = 4/200 (2%)

Query: 1   MAEKPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVS 60
           MAEKP PV+VLYC  CSLPAEYCEFG DFEKCKPWLIKNAPELYPDLLKEA+EKEA +VS
Sbjct: 1   MAEKPDPVKVLYCPTCSLPAEYCEFGSDFEKCKPWLIKNAPELYPDLLKEADEKEAGRVS 60

Query: 61  GQLQLFGLSSGGADGATS----GQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRK 116
            QL   G+SS GADG+ S    G+TSSSKQEEVKRLPGGKIKKK RQEVVIEKVVRNKRK
Sbjct: 61  EQLHSVGISSIGADGSASSVHSGETSSSKQEEVKRLPGGKIKKKVRQEVVIEKVVRNKRK 120

Query: 117 CITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW 176
            ITI+KGLDLFG+KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YDIVEFIT+TW
Sbjct: 121 SITIIKGLDLFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFITETW 180

Query: 177 PAVPETAIYFIEDGKKVAAA 196
           P VPETAIYFIEDGKKV AA
Sbjct: 181 PDVPETAIYFIEDGKKVPAA 200

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452514|ref|XP_004144004.1| PREDICTED: translation machinery-associated protein 22-like [Cucumis sativus] gi|449489890|ref|XP_004158450.1| PREDICTED: translation machinery-associated protein 22-like [Cucumis sativus]

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 164/196 (83%), Positives = 176/196 (89%), Gaps = 3/196 (1%)

Query: 1   MAEKPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVS 60
           MAEKPQPVRVLYC +CSLPAEYCEFGPDFEKCKPWLI+NAP+LYPDLLKEAN KEA +VS
Sbjct: 1   MAEKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  GQLQLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITI 120
            QLQ   +SS   DGA S   S  KQEEVKRLPGGKIKKK++QEV+IEKV RNKRKCIT 
Sbjct: 61  NQLQSTSISSAAGDGAAS---SGPKQEEVKRLPGGKIKKKDKQEVIIEKVTRNKRKCITT 117

Query: 121 VKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVP 180
           VKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YDIV+FIT+TWP VP
Sbjct: 118 VKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFITETWPDVP 177

Query: 181 ETAIYFIEDGKKVAAA 196
           ETAI+FIEDGKKV AA
Sbjct: 178 ETAIFFIEDGKKVPAA 193

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297807241|ref|XP_002871504.1| eukaryotic translation initiation factor SUI1 family protein [Arabidopsis lyrata subsp. lyrata] gi|297317341|gb|EFH47763.1| eukaryotic translation initiation factor SUI1 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  327 bits (839), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 161/198 (81%), Positives = 182/198 (91%), Gaps = 2/198 (1%)

Query: 1   MAEKPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVS 60
           MAEK +PV+VLYC +CSLPAEYCEFGPDF +CKPWL++NAP+LYPDLLKEANEK A+ VS
Sbjct: 1   MAEKLEPVKVLYCGVCSLPAEYCEFGPDFARCKPWLVENAPDLYPDLLKEANEKAADNVS 60

Query: 61  GQLQLFGLSSGGADGA-TSGQTS-SSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCI 118
            +LQ  G+SSGGADGA +S QT+ +SK+EEVKRLPGGK+KKK+RQEV+IEKVVRNKRKCI
Sbjct: 61  DKLQSVGISSGGADGAPSSAQTAGTSKKEEVKRLPGGKVKKKDRQEVIIEKVVRNKRKCI 120

Query: 119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPA 178
           TIVKGL+LFG+KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI YDIVEFITDTWP 
Sbjct: 121 TIVKGLELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIIYDIVEFITDTWPD 180

Query: 179 VPETAIYFIEDGKKVAAA 196
           VPE +I+FIEDGKKV A 
Sbjct: 181 VPERSIFFIEDGKKVQAG 198

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22326739|ref|NP_196751.2| Translation initiation factor SUI1 family protein [Arabidopsis thaliana] gi|17381204|gb|AAL36414.1| unknown protein [Arabidopsis thaliana] gi|30793919|gb|AAP40412.1| unknown protein [Arabidopsis thaliana] gi|51969034|dbj|BAD43209.1| unknown protein [Arabidopsis thaliana] gi|51969518|dbj|BAD43451.1| unknown protein [Arabidopsis thaliana] gi|51971214|dbj|BAD44299.1| unknown protein [Arabidopsis thaliana] gi|62319631|dbj|BAD95123.1| hypothetical protein [Arabidopsis thaliana] gi|332004353|gb|AED91736.1| Translation initiation factor SUI1 family protein [Arabidopsis thaliana]

 Score =  326 bits (836), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 161/198 (81%), Positives = 181/198 (91%), Gaps = 2/198 (1%)

Query: 1   MAEKPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVS 60
           MAEK +PV+VLYC +CSLPAEYCEFGPDF +CKPWL++NAP+LYPDLLKEANEK A+ VS
Sbjct: 1   MAEKLEPVKVLYCGVCSLPAEYCEFGPDFARCKPWLVENAPDLYPDLLKEANEKAADNVS 60

Query: 61  GQLQLFGLSSGGADGA-TSGQTS-SSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCI 118
            +LQ  G+SSGGADGA +S QT  +SK+EEVKRLPGGK+KKK+RQEV+IEKVVRNKRKCI
Sbjct: 61  DKLQSVGISSGGADGAPSSAQTGGTSKKEEVKRLPGGKVKKKDRQEVIIEKVVRNKRKCI 120

Query: 119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPA 178
           TIVKGL+LFG+KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI YDIVEFITDTWP 
Sbjct: 121 TIVKGLELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIIYDIVEFITDTWPD 180

Query: 179 VPETAIYFIEDGKKVAAA 196
           VPE +I+FIEDGKKV A 
Sbjct: 181 VPERSIFFIEDGKKVQAG 198

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499658|gb|AFK37895.1| unknown [Lotus japonicus]

 Score =  322 bits (824), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 159/196 (81%), Positives = 175/196 (89%), Gaps = 3/196 (1%)

Query: 1   MAEKPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVS 60
           MAEKPQPVRV YC +CSLP EYCEFG DFEKCKPWLI+NAP +YPDL+ EAN K+A+KV+
Sbjct: 1   MAEKPQPVRVQYCQVCSLPPEYCEFGSDFEKCKPWLIQNAPHVYPDLVNEANAKDADKVA 60

Query: 61  GQLQLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITI 120
            +LQ  GLSSG  DGA S   S+ KQEEVKRLPGGKIKKK++QEVVIEKVVRNKRK IT 
Sbjct: 61  DKLQSTGLSSGAGDGAAS---SAPKQEEVKRLPGGKIKKKDKQEVVIEKVVRNKRKSITT 117

Query: 121 VKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVP 180
           VKGL+LFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIS+DIVEFITDTWP VP
Sbjct: 118 VKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISFDIVEFITDTWPDVP 177

Query: 181 ETAIYFIEDGKKVAAA 196
           E+AI+FIEDG+KV AA
Sbjct: 178 ESAIFFIEDGRKVPAA 193

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530370|ref|XP_003533755.1| PREDICTED: translation machinery-associated protein 22-like isoform 2 [Glycine max]

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 159/196 (81%), Positives = 175/196 (89%), Gaps = 2/196 (1%)

Query: 1   MAEKPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVS 60
           MAEKPQPVRVLYC +CSLP EYCEFG DFEKCKPWLI+N P+LYPDLLKE  EKEA+KV+
Sbjct: 1   MAEKPQPVRVLYCGVCSLPPEYCEFGSDFEKCKPWLIQNVPDLYPDLLKE--EKEADKVA 58

Query: 61  GQLQLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITI 120
            +LQ  G+S  G   A+S  T + KQEEVKRLPGGKIKKK++QEVVIEKVVRNKRKCIT 
Sbjct: 59  DKLQSTGISGAGDGAASSAGTGTPKQEEVKRLPGGKIKKKDKQEVVIEKVVRNKRKCITT 118

Query: 121 VKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVP 180
           VKGL+LFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YD+VEFITDTWP VP
Sbjct: 119 VKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDVVEFITDTWPDVP 178

Query: 181 ETAIYFIEDGKKVAAA 196
           ETAI+FIEDG+KV AA
Sbjct: 179 ETAIFFIEDGRKVPAA 194

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
TAIR|locus:2143079	198	AT5G11900 [Arabidopsis thalian	0.994	0.984	0.741	2.1e-75
POMBASE|SPBC16C6.05	190	SPBC16C6.05 "mitochondrial tra	0.913	0.942	0.379	2.4e-28
UNIPROTKB|A4QVI3	201	TMA22 "Translation machinery-a	0.933	0.910	0.358	2.2e-27
ZFIN|ZDB-GENE-040718-450	208	denr "density-regulated protei	0.918	0.865	0.349	3.2e-26
UNIPROTKB|F1NE92	201	DENR "Density-regulated protei	0.857	0.835	0.365	9.7e-25
UNIPROTKB|Q5ZJ39	198	DENR "Density-regulated protei	0.857	0.848	0.365	9.7e-25
UNIPROTKB|Q2HJ47	198	DENR "Density-regulated protei	0.857	0.848	0.359	1.6e-24
UNIPROTKB|J9NSD0	275	DENR "Uncharacterized protein"	0.857	0.610	0.359	1.6e-24
UNIPROTKB|O43583	198	DENR "Density-regulated protei	0.857	0.848	0.359	1.6e-24
ASPGD|ASPL0000050181	196	AN8883 [Emericella nidulans (t	0.928	0.928	0.326	5.3e-24

TAIR|locus:2143079 AT5G11900 [Arabidopsis thaliana (taxid:3702)]

 Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
 Identities = 146/197 (74%), Positives = 163/197 (82%)

Query:     1 MAEKPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLXXXXXXXXXXVX 60
             MAEK +PV+VLYC +CSLPAEYCEFGPDF +CKPWL++NAP+LYPDLL          V 
Sbjct:     1 MAEKLEPVKVLYCGVCSLPAEYCEFGPDFARCKPWLVENAPDLYPDLLKEANEKAADNVS 60

Query:    61 XXXXXXXXXXXXADGA-TSGQTS-SSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCI 118
                         ADGA +S QT  +SK+EEVKRLPGGK+KKK+RQEV+IEKVVRNKRKCI
Sbjct:    61 DKLQSVGISSGGADGAPSSAQTGGTSKKEEVKRLPGGKVKKKDRQEVIIEKVVRNKRKCI 120

Query:   119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPA 178
             TIVKGL+LFG+KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI YDIVEFITDTWP 
Sbjct:   121 TIVKGLELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIIYDIVEFITDTWPD 180

Query:   179 VPETAIYFIEDGKKVAA 195
             VPE +I+FIEDGKKV A
Sbjct:   181 VPERSIFFIEDGKKVQA 197

GO:0003743 "translation initiation factor activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006413 "translational initiation" evidence=IEA;ISS

POMBASE|SPBC16C6.05 SPBC16C6.05 "mitochondrial translation initiation factor (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 71/187 (37%), Positives = 102/187 (54%)

Query:     5 PQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLXXXXXXXXXXVXXXXX 64
             P+   VLYC +C+LP EYCEF    +KCK WL  + P++Y  L           +     
Sbjct:     7 PKLKSVLYCDVCTLPVEYCEFEGTLKKCKEWLKSSHPDVYDKLYGEQD------LSKDLE 60

Query:    65 XXXXXXXXADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGL 124
                      D     Q +   +EE KR+   + K+    +V+I+ + R KRK +T V+GL
Sbjct:    61 NTLNVSGTKDSNAEEQPAKLTKEE-KRVEREEAKRMA-SKVLIKTIERTKRKRVTTVQGL 118

Query:   125 DLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAI 184
             D FG++   A+K L  KFATGASV K   +K++I VQGD++YDI +FI + +  VPE  I
Sbjct:   119 DAFGIETKKAAKMLANKFATGASVTKTADKKDEIVVQGDLNYDIFDFILEKFKEVPEDNI 178

Query:   185 YFIEDGK 191
               +ED K
Sbjct:   179 KIVEDTK 185

GO:0003743 "translation initiation factor activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005840 "ribosome" evidence=IEA

GO:0006413 "translational initiation" evidence=IEA

GO:0032543 "mitochondrial translation" evidence=NAS

UNIPROTKB|A4QVI3 TMA22 "Translation machinery-associated protein 22" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 70/195 (35%), Positives = 101/195 (51%)

Query:     4 KPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLXXXXXXXXXXVXXXX 63
             +PQ   V YC +CSLP EYCE+G   +KC+ WL +N  E+Y  +                
Sbjct:    13 EPQGREVTYCGVCSLPPEYCEYGGTVKKCQDWLQRNNQEMYDRIWSPEALQAATAALSVE 72

Query:    64 XXXXXXXXXADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKG 123
                         A   + + +K  +       K+KK     V ++++ RNKRK +T V G
Sbjct:    73 AQQRAEKDAKKKAAKAEAAEAKHAD-------KLKKSV---VTVKRIERNKRKYVTSVSG 122

Query:   124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETA 183
             L+ FG++L   +K  GKKFATG+SV K  +  E+I VQGD+S +I EFI + +  VPE  
Sbjct:   123 LESFGLELKKVAKDFGKKFATGSSVTKVASGGEEIVVQGDVSDEIKEFIVEKYKDVPEDN 182

Query:   184 IYFIED--GKKVAAA 196
             I  ++D   KK  AA
Sbjct:   183 IELVDDKKNKKKEAA 197

GO:0005575 "cellular_component" evidence=ND

ZFIN|ZDB-GENE-040718-450 denr "density-regulated protein" [Danio rerio (taxid:7955)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 66/189 (34%), Positives = 105/189 (55%)

Query:     7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLXXXXXXXXXXVXXXXXXX 66
             P++VLYC +CSLPAEYCE+ P+  KCK WL KN P+++  L                   
Sbjct:    26 PLKVLYCGVCSLPAEYCEYMPEPAKCKQWLEKNFPDVFAKLTLGTAPKQESKGGGGGEDG 85

Query:    67 XXXXXXADGATSGQTSSSKQEEVKRLPGGKIKKKER---QEVVIEKVVRNKRKCITIVKG 123
                    +   +G+    K++  KR   G+IK+K++   Q+V I K+ R K+K +T V G
Sbjct:    86 GGGRGRGEAPPAGEEEEKKKQ--KRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCG 143

Query:   124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETA 183
             L  F ++L +A +   +KF+ GASV    T +++I +QGD + DI++ I + WP V + +
Sbjct:   144 LATFDIELKEAQRFFAQKFSCGASV----TAEDEIIIQGDFTDDIIDVIQEKWPEVDDDS 199

Query:   184 IYFIEDGKK 192
             I  + + KK
Sbjct:   200 IDDLGEVKK 208

GO:0003743 "translation initiation factor activity" evidence=IEA

GO:0006413 "translational initiation" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1NE92 DENR "Density-regulated protein" [Gallus gallus (taxid:9031)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 69/189 (36%), Positives = 104/189 (55%)

Query:     7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLXXXXXXXXXXVXXXXXXX 66
             P+RVLYC +CSLP EYCE+ PD  KC+ WL KN P+ +  L           V       
Sbjct:    31 PLRVLYCGVCSLPTEYCEYMPDVTKCRQWLEKNFPDEFAKLTVENSPKQEAGVGE----- 85

Query:    67 XXXXXXADGATSGQTSSSKQEEVKRLPGGKIKKKER---QEVVIEKVVRNKRKCITIVKG 123
                     G T+G+    K++  KR   G+IK+K++   Q+V I K+ R K+K +T V G
Sbjct:    86 ------GQG-TAGEEEEKKKQ--KRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCG 136

Query:   124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETA 183
             L  F + L +A +   +KF+ GASV    T +++I +QGD + DI++ I + WP V + +
Sbjct:   137 LATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDS 192

Query:   184 IYFIEDGKK 192
             I  + + KK
Sbjct:   193 IEDLGEVKK 201

GO:0003743 "translation initiation factor activity" evidence=IEA

UNIPROTKB|Q5ZJ39 DENR "Density-regulated protein" [Gallus gallus (taxid:9031)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 69/189 (36%), Positives = 104/189 (55%)

Query:     7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLXXXXXXXXXXVXXXXXXX 66
             P+RVLYC +CSLP EYCE+ PD  KC+ WL KN P+ +  L           V       
Sbjct:    28 PLRVLYCGVCSLPTEYCEYMPDVTKCRQWLEKNFPDEFAKLTVENSPKQEAGVGE----- 82

Query:    67 XXXXXXADGATSGQTSSSKQEEVKRLPGGKIKKKER---QEVVIEKVVRNKRKCITIVKG 123
                     G T+G+    K++  KR   G+IK+K++   Q+V I K+ R K+K +T V G
Sbjct:    83 ------GQG-TAGEEEEKKKQ--KRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCG 133

Query:   124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETA 183
             L  F + L +A +   +KF+ GASV    T +++I +QGD + DI++ I + WP V + +
Sbjct:   134 LATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDS 189

Query:   184 IYFIEDGKK 192
             I  + + KK
Sbjct:   190 IEDLGEVKK 198

GO:0003743 "translation initiation factor activity" evidence=IEA

UNIPROTKB|Q2HJ47 DENR "Density-regulated protein" [Bos taurus (taxid:9913)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 68/189 (35%), Positives = 103/189 (54%)

Query:     7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLXXXXXXXXXXVXXXXXXX 66
             P+RVLYC +CSLP EYCE+ PD  KC+ WL KN P  +  L           +       
Sbjct:    28 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISE----- 82

Query:    67 XXXXXXADGATSGQTSSSKQEEVKRLPGGKIKKKER---QEVVIEKVVRNKRKCITIVKG 123
                     G T+G+    K++  KR   G+IK+K++   Q+V I K+ R K+K +T V G
Sbjct:    83 ------GQG-TAGEEEEKKKQ--KRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCG 133

Query:   124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETA 183
             L  F + L +A +   +KF+ GASV    T +++I +QGD + DI++ I + WP V + +
Sbjct:   134 LATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDS 189

Query:   184 IYFIEDGKK 192
             I  + + KK
Sbjct:   190 IEDLGEVKK 198

GO:0003743 "translation initiation factor activity" evidence=IEA

UNIPROTKB|J9NSD0 DENR "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 68/189 (35%), Positives = 103/189 (54%)

Query:     7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLXXXXXXXXXXVXXXXXXX 66
             P+RVLYC +CSLP EYCE+ PD  KC+ WL KN P  +  L           +       
Sbjct:   105 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISE----- 159

Query:    67 XXXXXXADGATSGQTSSSKQEEVKRLPGGKIKKKER---QEVVIEKVVRNKRKCITIVKG 123
                     G T+G+    K++  KR   G+IK+K++   Q+V I K+ R K+K +T V G
Sbjct:   160 ------GQG-TAGEEEEKKKQ--KRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCG 210

Query:   124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETA 183
             L  F + L +A +   +KF+ GASV    T +++I +QGD + DI++ I + WP V + +
Sbjct:   211 LATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDS 266

Query:   184 IYFIEDGKK 192
             I  + + KK
Sbjct:   267 IEDLGEVKK 275

GO:0003743 "translation initiation factor activity" evidence=IEA

UNIPROTKB|O43583 DENR "Density-regulated protein" [Homo sapiens (taxid:9606)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 68/189 (35%), Positives = 103/189 (54%)

Query:     7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLXXXXXXXXXXVXXXXXXX 66
             P+RVLYC +CSLP EYCE+ PD  KC+ WL KN P  +  L           +       
Sbjct:    28 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISE----- 82

Query:    67 XXXXXXADGATSGQTSSSKQEEVKRLPGGKIKKKER---QEVVIEKVVRNKRKCITIVKG 123
                     G T+G+    K++  KR   G+IK+K++   Q+V I K+ R K+K +T V G
Sbjct:    83 ------GQG-TAGEEEEKKKQ--KRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCG 133

Query:   124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETA 183
             L  F + L +A +   +KF+ GASV    T +++I +QGD + DI++ I + WP V + +
Sbjct:   134 LATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDS 189

Query:   184 IYFIEDGKK 192
             I  + + KK
Sbjct:   190 IEDLGEVKK 198

GO:0003743 "translation initiation factor activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005515 "protein binding" evidence=IPI

ASPGD|ASPL0000050181 AN8883 [Emericella nidulans (taxid:162425)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 65/199 (32%), Positives = 100/199 (50%)

Query:     1 MAEKPQPV------RVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLXXXXXX 54
             MAE  QP       ++ YC +C+LP EYCEFG   +KC+ WL  N  E Y  L       
Sbjct:     1 MAEVSQPPAETQARQITYCGVCTLPPEYCEFGGTAKKCQEWLKDNRLEEYQRLYSDEAIS 60

Query:    55 XXXXVXXXXXXXXXXXXXADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNK 114
                               A        + ++  E          ++   +V I++V RNK
Sbjct:    61 ANLSTLSVSVQERAAKDAAKKEAKAAAAEARDAE----------RRATSKVQIKRVERNK 110

Query:   115 RKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITD 174
             RK +++V GL+++G++    +K+LGKKFATG+SV K  +  E+I VQGD+  DI E++ +
Sbjct:   111 RKHVSVVTGLEVYGLENKKVAKELGKKFATGSSVTKSASGIEEITVQGDVCEDIKEWLLE 170

Query:   175 TW-PAVPETAIYFIEDGKK 192
              +   + E+ I  +ED KK
Sbjct:   171 NYGKGISESNIEIVEDKKK 189

GO:0005840 "ribosome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006413 "translational initiation" evidence=IEA

GO:0003743 "translation initiation factor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q54WG0	DENR_DICDI	No assigned EC number	0.3486	0.9438	0.8258	yes	no
Q4WBL6	DENR_ASPFU	No assigned EC number	0.3776	0.9030	0.9123	yes	no
Q9NAH4	DENR_CAEEL	No assigned EC number	0.3064	0.8673	0.8854	yes	no
Q2HJ47	DENR_BOVIN	No assigned EC number	0.3922	0.8163	0.8080	yes	no
O42929	DENR_SCHPO	No assigned EC number	0.3850	0.9132	0.9421	yes	no
A2QHG9	DENR_ASPNC	No assigned EC number	0.36	0.9285	0.9238	yes	no
Q6DH65	DENR_DANRE	No assigned EC number	0.3791	0.8724	0.8221	yes	no
P47089	DENR_YEAST	No assigned EC number	0.3231	0.8214	0.8131	yes	no
Q2TVZ2	DENR_ASPOR	No assigned EC number	0.3617	0.9030	0.9123	yes	no
Q6CA08	DENR_YARLI	No assigned EC number	0.3772	0.8112	0.8457	yes	no
Q5ZJ39	DENR_CHICK	No assigned EC number	0.3812	0.8163	0.8080	yes	no
Q5RFP5	DENR_PONAB	No assigned EC number	0.3922	0.8163	0.8080	yes	no
O43583	DENR_HUMAN	No assigned EC number	0.3922	0.8163	0.8080	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00032202001	SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (197 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00022683001	SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (181 aa)				•	•		•		0.674

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	196
TIGR01159	173	TIGR01159, DRP1, density-regulated protein DRP1	6e-64
cd11607	86	cd11607, DENR_C, C-terminal domain of DENR and rel	9e-40
pfam01253	74	pfam01253, SUI1, Translation initiation factor SUI	2e-17
COG0023	104	COG0023, SUI1, Translation initiation factor 1 (eI	1e-12
cd11608	85	cd11608, eIF2D_C, C-terminal domain of eIF2D and r	1e-07
cd11566	84	cd11566, eIF1_SUI1, Eukaryotic initiation factor 1	5e-06
PRK00939	99	PRK00939, PRK00939, translation initiation factor	1e-05
cd00474	78	cd00474, eIF1_SUI1_like, Eukaryotic initiation fac	4e-05
TIGR01158	101	TIGR01158, SUI1_rel, translation initation factor	2e-04
TIGR01160	110	TIGR01160, SUI1_MOF2, translation initiation facto	4e-04

>gnl|CDD|233294 TIGR01159, DRP1, density-regulated protein DRP1

 Score =  194 bits (495), Expect = 6e-64
 Identities = 76/184 (41%), Positives = 102/184 (55%), Gaps = 14/184 (7%)

Query: 7   PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKE---ANEKEAEKVSGQL 63
           P+RVLYC +CSLP EYCEF  D ++CK WL +NAP+LY  L        E EA  +    
Sbjct: 1   PLRVLYCGVCSLPPEYCEFSGDLKRCKVWLSENAPDLYAKLYGTDSPTAEAEAVTIGEAQ 60

Query: 64  QLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKG 123
           +  G       G    Q +           GGK KKK  Q+V I++  R KRK +T++KG
Sbjct: 61  EEKGEKD--LLGIQKAQEAR---------EGGKKKKKLPQKVTIKREPRTKRKFVTVIKG 109

Query: 124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETA 183
           L+ F + L  ASK   +KFATG SV K  T KE+I +QGD+  DI ++I + WP V +  
Sbjct: 110 LETFDIDLKKASKTFAQKFATGCSVSKSVTGKEEIVIQGDVMDDIEDYIHEKWPEVGDKD 169

Query: 184 IYFI 187
           I  +
Sbjct: 170 IKDL 173

This protein family shows weak but suggestive similarity to translation initiation factor SUI1 and its prokaryotic homologs. Length = 173

>gnl|CDD|211320 cd11607, DENR_C, C-terminal domain of DENR and related proteins

 Score =  130 bits (329), Expect = 9e-40
 Identities = 39/86 (45%), Positives = 56/86 (65%)

Query: 103 QEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQG 162
            +V I+++ RNKRK +T V GL+ FG+ L  A+K   KKFA GASV KG   K++I +QG
Sbjct: 1   SKVTIKRISRNKRKFVTTVTGLETFGIDLKKAAKLFAKKFACGASVTKGAEGKDEIVIQG 60

Query: 163 DISYDIVEFITDTWPAVPETAIYFIE 188
           D++ DIV+ I + WP + E  I  + 
Sbjct: 61  DVTDDIVDLILEKWPEIDEDNIEILG 86

DENR (density regulated protein), together with MCT-1 (multiple copies T cell malignancies), has been shown to have similar function as eIF2D translation initiation factor (also known as ligatin), which is involved in the recruitment and delivery of aminoacyl-tRNAs to the P-site of the eukaryotic ribosome in a GTP-independent manner. Length = 86

>gnl|CDD|216391 pfam01253, SUI1, Translation initiation factor SUI1

 Score = 72.5 bits (179), Expect = 2e-17
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 99  KKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQI 158
           KKE Q++ I +  R   K +T+V GL+LFG+ L   +K+L KKF  G +V  G    E+I
Sbjct: 1   KKEDQKIRIRREKRRGGKTVTVVTGLELFGIDLKKLAKELKKKFGCGGTVKDG----EEI 56

Query: 159 DVQGDISYDIVEFITDTW 176
           ++QGD    + + +    
Sbjct: 57  EIQGDHRDKVKDLLEKEG 74

Length = 74

>gnl|CDD|223102 COG0023, SUI1, Translation initiation factor 1 (eIF-1/SUI1) and related proteins [Translation, ribosomal structure and biogenesis]

 Score = 61.2 bits (149), Expect = 1e-12
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 5/85 (5%)

Query: 90  KRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVV 149
           K L   ++ K+  Q V I +  R K K +TI++GLDL  + L   +K+L KK A G +V 
Sbjct: 14  KELTCEEVAKEGDQIVRIRRETRRKGKTVTIIEGLDLKDIDLKKLAKELKKKCACGGTVK 73

Query: 150 KGPTEKEQIDVQGDISYDIVEFITD 174
            G     +I++QGD    + E +  
Sbjct: 74  DG-----EIEIQGDHRDKVKELLIK 93

Length = 104

>gnl|CDD|211321 cd11608, eIF2D_C, C-terminal domain of eIF2D and related proteins

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 4/75 (5%)

Query: 104 EVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKE--QIDVQ 161
           ++  E+   NK+  +T++ GL+ FG+   + +K+L KK A   SV   P +K+  ++ VQ
Sbjct: 3   DITTERRQGNKK--VTLISGLESFGIDPEEFAKELQKKCAASTSVSPLPGKKKGVEVQVQ 60

Query: 162 GDISYDIVEFITDTW 176
           G+    + + +T+ +
Sbjct: 61  GNQVKFVAKLLTEKY 75

eIF2D translation initiation factor (also known as ligatin) is involved in the recruitment and delivery of aminoacyl-tRNAs to the P-site of the eukaryotic ribosome in a GTP-independent manner. Length = 85

>gnl|CDD|211318 cd11566, eIF1_SUI1, Eukaryotic initiation factor 1

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)

Query: 112 RNKRKCITIVKGL-DLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVE 170
           RN RK +T V+GL + F +K     K   K+FA   +VV+ P   E I +QGD   +I E
Sbjct: 10  RNGRKTLTTVQGLPEEFDLKK--ILKAFKKEFACNGTVVEDPEYGEVIQLQGDQRKNIKE 67

Query: 171 FITD 174
           F+ +
Sbjct: 68  FLLE 71

eIF1/SUI1 (eukaryotic initiation factor 1) plays an important role in accurate initiator codon recognition during translation initiation. eIF1 interacts with 18S rRNA in the 40S ribosomal subunit during eukaryotic translation initiation. Point mutations in the yeast eIF1 implicate the protein in maintaining accurate start-site selection but its mechanism of action is unknown. Length = 84

>gnl|CDD|179173 PRK00939, PRK00939, translation initiation factor Sui1; Reviewed

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 5/64 (7%)

Query: 100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 159
           KE+Q + I+   R   K +TI++G+D   + L + +KKL  K A G +V  G     +I+
Sbjct: 21  KEQQRIKIKVDKRRYGKEVTIIEGIDPKDIDLKELAKKLKSKLACGGTVKDG-----RIE 75

Query: 160 VQGD 163
           +QGD
Sbjct: 76  LQGD 79

Length = 99

>gnl|CDD|211317 cd00474, eIF1_SUI1_like, Eukaryotic initiation factor 1 and related proteins

 Score = 40.5 bits (95), Expect = 4e-05
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 105 VVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI 164
           + I+   R+  K +T V+GL  + + L   + +L KK   G SV     EK +I++QGD 
Sbjct: 2   IHIKVEQRSGGKKVTKVEGLPAY-IDLRKLADELKKKLGCGGSVEG---EKMEIEIQGDH 57

Query: 165 SYDIVEFITDTWPAV 179
           +  I+  + +     
Sbjct: 58  TDQIIVALEEKGIDK 72

Members of the eIF1/SUI1 (eukaryotic initiation factor 1) family are found in eukaryotes, archaea, and some bacteria; eukaryotic members are understood to play an important role in accurate initiator codon recognition during translation initiation. eIF1 interacts with 18S rRNA in the 40S ribosomal subunit during eukaryotic translation initiation. Point mutations in the yeast eIF1 implicate the protein in maintaining accurate start-site selection but its mechanism of action is unknown. The function of non-eukaryotic family members is also unclear. Length = 78

>gnl|CDD|130226 TIGR01158, SUI1_rel, translation initation factor SUI1, putative, prokaryotic

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 97  IKKKERQEVVIEKVVRN-KRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEK 155
            K KE Q V I++  R  K K +TI++GLDL  + L + +K+L  K   G +V  G    
Sbjct: 18  AKPKEDQVVRIQRETRGRKGKGVTIIEGLDLSDIDLKELAKELKSKCGCGGTVKDG---- 73

Query: 156 EQIDVQGD 163
             I++QGD
Sbjct: 74  -VIEIQGD 80

This family of archaeal and bacterial proteins is homologous to the eukaryotic translation intiation factor SUI1 involved in directing the ribosome to the proper start site of translation by functioning in concert with eIF-2 and the initiator tRNA-Met [Protein synthesis, Translation factors]. Length = 101

>gnl|CDD|130228 TIGR01160, SUI1_MOF2, translation initiation factor SUI1, eukaryotic

 Score = 38.3 bits (89), Expect = 4e-04
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 112 RNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEF 171
           RN RK +T V+GL      L    K L K+FA   +V++ P   E I +QGD   ++ EF
Sbjct: 35  RNGRKTLTTVQGLPK-EYDLKKIVKALKKEFACNGTVIEDPEMGEVIQLQGDQRKNVCEF 93

Query: 172 I 172
           +
Sbjct: 94  L 94

Alternate name: MOF2. A similar protein family (see TIGRFAMs model TIGR01158) is found in prokaryotes. The human proteins complements a yeast SUI1 mutatation [Protein synthesis, Translation factors]. Length = 110

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	196
TIGR01159	173	DRP1 density-regulated protein DRP1. This protein	100.0
KOG3239	193	consensus Density-regulated protein related to tra	100.0
PF01253	83	SUI1: Translation initiation factor SUI1; InterPro	99.93
COG0023	104	SUI1 Translation initiation factor 1 (eIF-1/SUI1)	99.9
cd00474	77	SUI1_eIF1 The SUI1/eIF1 (eukaryotic initiation fac	99.89
TIGR01160	110	SUI1_MOF2 translation initiation factor SUI1, euka	99.88
PRK00939	99	translation initiation factor Sui1; Reviewed	99.88
TIGR01158	101	SUI1_rel translation initation factor SUI1, putati	99.83
KOG2522	560	consensus Filamentous baseplate protein Ligatin, c	99.79
KOG1770	112	consensus Translation initiation factor 1 (eIF-1/S	99.79
PRK06824	118	translation initiation factor Sui1; Validated	99.74
PRK07451	115	translation initiation factor Sui1; Validated	99.73
PRK09019	108	translation initiation factor Sui1; Validated	99.72
PF05046	87	Img2: Mitochondrial large subunit ribosomal protei	97.53
PRK03988	138	translation initiation factor IF-2 subunit beta; V	93.77
TIGR00311	133	aIF-2beta translation initiation factor aIF-2, bet	93.7
smart00653	110	eIF2B_5 domain present in translation initiation f	93.33
PRK14434	92	acylphosphatase; Provisional	92.06
PRK14451	89	acylphosphatase; Provisional	91.63
PRK14449	90	acylphosphatase; Provisional	91.49
PRK14444	92	acylphosphatase; Provisional	91.37
PRK14437	109	acylphosphatase; Provisional	90.82
PRK12336	201	translation initiation factor IF-2 subunit beta; P	90.74
PRK14425	94	acylphosphatase; Provisional	90.62
PRK14436	91	acylphosphatase; Provisional	90.36
KOG4034	169	consensus Uncharacterized conserved protein NOF (N	89.95
PF01873	125	eIF-5_eIF-2B: Domain found in IF2B/IF5; InterPro:	89.93
PRK14422	93	acylphosphatase; Provisional	89.74
PRK14443	93	acylphosphatase; Provisional	89.56
PRK14438	91	acylphosphatase; Provisional	89.51
PRK14446	88	acylphosphatase; Provisional	89.46
PRK14440	90	acylphosphatase; Provisional	89.35
PRK14452	107	acylphosphatase; Provisional	89.34
PRK14445	91	acylphosphatase; Provisional	89.23
PRK14442	91	acylphosphatase; Provisional	89.22
PRK14429	90	acylphosphatase; Provisional	89.08
PRK14433	87	acylphosphatase; Provisional	88.85
PRK14428	97	acylphosphatase; Provisional	88.85
PRK14435	90	acylphosphatase; Provisional	88.71
PRK14427	94	acylphosphatase; Provisional	88.69
PRK14420	91	acylphosphatase; Provisional	88.58
PRK14423	92	acylphosphatase; Provisional	87.9
PRK14426	92	acylphosphatase; Provisional	87.78
PRK14450	91	acylphosphatase; Provisional	87.55
PRK14447	95	acylphosphatase; Provisional	87.52
PRK14421	99	acylphosphatase; Provisional	86.76
PF00708	91	Acylphosphatase: Acylphosphatase; InterPro: IPR001	86.34
PRK14432	93	acylphosphatase; Provisional	85.6
PRK14448	90	acylphosphatase; Provisional	85.58
PRK14439	163	acylphosphatase; Provisional	85.53
TIGR02174	72	CXXU_selWTH selT/selW/selH selenoprotein domain. T	85.02
PRK14441	93	acylphosphatase; Provisional	84.71
PRK14424	94	acylphosphatase; Provisional	82.0

>TIGR01159 DRP1 density-regulated protein DRP1

Probab=100.00  E-value=2.8e-60  Score=391.36  Aligned_cols=172  Identities=41%  Similarity=0.740  Sum_probs=144.6

Q ss_pred             ceeeEeCCCCCCCccccccCCChhhHHHHHHHhCCCchhHHHhhhhhHHHHHHhhhhhhccCCCCCCCCCCCCCCC-cch
Q 029248            7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLFGLSSGGADGATSGQTS-SSK   85 (196)
Q Consensus         7 p~~V~YC~vCs~P~EYCEfg~~~~kCk~WL~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~kk   85 (196)
                      |++|+||||||||||||||||++++|++||++||||||++||++.      .+.+.+..+++|...+..+..   + .++
T Consensus         1 p~~V~YCgvCs~P~EyCEf~~~~~kCk~WL~~n~p~l~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~---~~~k~   71 (173)
T TIGR01159         1 PLRVLYCGVCSLPPEYCEFSGDLKRCKVWLSENAPDLYAKLYGTD------SPTAEAEAVTIGEAQEEKGEK---DLLGI   71 (173)
T ss_pred             CceeEECCCCCCchHHhcCCCCHHHHHHHHHHhChHHHHHHhhcc------cchhccccchhhHHHHhhhhh---hhhHH
Confidence            789999999999999999999999999999999999999999842      222222112333222221111   2 333


Q ss_pred             HHHHhhCCCCCCccCCCCcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCch
Q 029248           86 QEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIS  165 (196)
Q Consensus        86 ~~k~~~~~~~~~kk~~~~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~  165 (196)
                      +++..+++.++++|+.+++|+|++++|+|||+||+|+||+.|++||++|||.|+++||||+||+++++++++|+|||||+
T Consensus        72 ~~~~~~~~~~~~kK~~~~~V~I~~~~R~krK~VT~V~GLe~f~idlk~laK~lkkkfacG~SV~k~~~~~~eI~IQGD~~  151 (173)
T TIGR01159        72 QKAQEAREGGKKKKKLPQKVTIKREPRTKRKFVTVIKGLETFDIDLKKASKTFAQKFATGCSVSKSVTGKEEIVIQGDVM  151 (173)
T ss_pred             HhhhhhhhhhhhccCCCCeEEEEEEecCCCceEEEEeCCcCCCcCHHHHHHHHHHHhCCCCccccCCCCCCEEEecCCHH
Confidence            44444566677888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhCCCCCCCcEEEc
Q 029248          166 YDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       166 ~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      ++|.+||.++|++||+++|+++
T Consensus       152 ~~v~e~L~~~~~~v~e~~I~~~  173 (173)
T TIGR01159       152 DDIEDYIHEKWPEVGDKDIKDL  173 (173)
T ss_pred             HHHHHHHHHHcCCCCHHHeeeC
Confidence            9999999999999999999975

This protein family shows weak but suggestive similarity to translation initiation factor SUI1 and its prokaryotic homologs.

>KOG3239 consensus Density-regulated protein related to translation initiation factor 1 (eIF-1/SUI1) [General function prediction only]

Probab=100.00  E-value=1.4e-58  Score=378.42  Aligned_cols=179  Identities=45%  Similarity=0.799  Sum_probs=143.9

Q ss_pred             CCCCCCcee--eEeCCCCCCCccccccCCChhhHHHHHHHhCCCchhHHHhhhhhHHHHHHhhhhhhccCC-CCCCCCCC
Q 029248            1 MAEKPQPVR--VLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLFGLS-SGGADGAT   77 (196)
Q Consensus         1 m~~~~~p~~--V~YC~vCs~P~EYCEfg~~~~kCk~WL~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~s-~~~~~~~~   77 (196)
                      ||+.+.|+.  |+||||||||+|||||+|++.+|++||..||||||++||.+.+.+      ...   ..| ..+.+|++
T Consensus         1 ~a~k~~P~~~~vlYCGvCSlP~EYCEf~~~~~kCk~WL~~n~pdly~kL~~e~~~~------qe~---~~s~~~~a~G~~   71 (193)
T KOG3239|consen    1 MADKLGPRKGSVLYCGVCSLPPEYCEFSGDLKKCKEWLEENHPDLYAKLYGEDDPK------QEV---EASTAEGADGEA   71 (193)
T ss_pred             CCccCCCcccceEEeeccCCCHHHHHccccHHHHHHHHHhcChhHHHhhhcccChh------hhh---cccccccccCCc
Confidence            888888888  999999999999999999999999999999999999999853321      111   111 11222222


Q ss_pred             CCCCCcch-------HHHHhhCCCCCCccCCCCcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeee
Q 029248           78 SGQTSSSK-------QEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVK  150 (196)
Q Consensus        78 ~~~~~~kk-------~~k~~~~~~~~~kk~~~~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k  150 (196)
                      .   +.++       +.+++.+..++.+++.+++|.|.++.|++||+||+|+||+.|+|||+.+||.|+++||||+||++
T Consensus        72 ~---e~k~ek~~gk~~k~~~~~~~~e~~k~~pqkV~I~r~~R~KrK~VT~V~GL~~FdIdlk~aaK~fa~KFAtGaSVtk  148 (193)
T KOG3239|consen   72 D---EKKKEKRGGKGQKKQENRSQREKKKRLPQKVIIKREARTKRKSVTVVKGLETFDIDLKKAAKFFAQKFATGASVTK  148 (193)
T ss_pred             h---hhHHHhccccchhhhhhHHHHHHhccCCceeEeeecccCCceeEEEEechhhccccHHHHHHHHHHhhccCccccC
Confidence            1   1111       11122233345667889999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCceEEEcCCchHHHHHHHhhhCCCCCCCc--EEEccccc
Q 029248          151 GPTEKEQIDVQGDISYDIVEFITDTWPAVPETA--IYFIEDGK  191 (196)
Q Consensus       151 ~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~--I~~~~~~K  191 (196)
                      ++++.+||+||||+.++|.+||.++|++||+++  |+.++++|
T Consensus       149 ~a~kkdEIvIQGDv~dDi~d~I~ekw~ev~ed~~~IED~~~kK  191 (193)
T KOG3239|consen  149 NAEKKDEIVIQGDVKDDIFDFIPEKWPEVPEDDVKIEDLGDKK  191 (193)
T ss_pred             CCCccceEEEeccchHHHHHHHHHhcccCCcccceeecchhhh
Confidence            999999999999999999999999999999995  44444443

>PF01253 SUI1: Translation initiation factor SUI1; InterPro: IPR001950 In Saccharomyces cerevisiae (Baker's yeast), SUI1 is a translation initiation factor that functions in concert with eIF-2 and the initiator tRNA-Met in directing the ribosome to the proper start site of translation []

Probab=99.93  E-value=5.8e-26  Score=166.53  Aligned_cols=82  Identities=41%  Similarity=0.678  Sum_probs=70.9

Q ss_pred             cCCCCcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCC
Q 029248           99 KKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPA  178 (196)
Q Consensus        99 k~~~~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~  178 (196)
                      |+..+.|+|++++|+|||+||+|+||+.|++|+++||+.|+++||||+||+++++++++|+||||++++|.+||.++| .
T Consensus         1 k~~~~~I~I~~e~r~~~K~vT~V~gl~~~~~d~~~lak~lkk~~ac~~sv~~~~~k~~~I~iQGd~~~~i~~~L~~~~-~   79 (83)
T PF01253_consen    1 KKEPPKIHIRVEKRRGRKFVTIVSGLELFGIDLKELAKELKKKFACGGSVTKDPGKGEEIQIQGDHRDEIKDLLVEKG-G   79 (83)
T ss_dssp             -S-TTCEEEEEEESSSSEEEEEEES--STTSHHHHHHHHHHHHHTS-EEEEE-TTTSSEEEEESS-HHHHHHHHHHHC-S
T ss_pred             CCCCCEEEEEEEeCcCCeEEEEEECCcccccCHHHHHHHHHHhccCceEEeecCCCCCEEEECCcHHHHHHHHHHHhC-C
Confidence            467899999999999999999999999999999999999999999999999998668899999999999999999998 7


Q ss_pred             CCC
Q 029248          179 VPE  181 (196)
Q Consensus       179 ip~  181 (196)
                      +|+
T Consensus        80 ~~k   82 (83)
T PF01253_consen   80 IPK   82 (83)
T ss_dssp             SE-
T ss_pred             CCC
Confidence            765

SUI1 is a protein of 108 residues. Close homologs of SUI1 have been found [] in mammals, insects and plants. SUI1 is also evolutionary related to hypothetical proteins from Escherichia coli (yciH), Haemophilus influenzae (HI1225) and Methanococcus vannielii.; GO: 0003743 translation initiation factor activity, 0006413 translational initiation; PDB: 2OGH_A 1D1R_A 2IF1_A 2XZN_F 2XZM_F.

>COG0023 SUI1 Translation initiation factor 1 (eIF-1/SUI1) and related proteins [Translation, ribosomal structure and biogenesis]

Probab=99.90  E-value=5.4e-24  Score=162.68  Aligned_cols=83  Identities=33%  Similarity=0.471  Sum_probs=76.9

Q ss_pred             CccCCCCcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC
Q 029248           97 IKKKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  176 (196)
Q Consensus        97 ~kk~~~~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~  176 (196)
                      ..+...+.|+|++++|++||.||+|+||+.|++||++||+.|+++|||||||     ++++|+|||||++.|.+||.+  
T Consensus        21 ~~k~~~~~V~I~~e~rr~gK~VTiI~Gld~~~~dlk~Lak~LKk~cacGGtv-----k~~~IeiQGdhr~~v~~~L~~--   93 (104)
T COG0023          21 VAKEGDQIVRIRRETRRKGKTVTIIEGLDLKDIDLKKLAKELKKKCACGGTV-----KDGEIEIQGDHRDKVKELLIK--   93 (104)
T ss_pred             cccccCCeEEEEEEeecCCcEEEEEeCcccchhhHHHHHHHHHHHcCCCcee-----cCCEEEEeChHHHHHHHHHHH--
Confidence            3345689999999999999999999999999999999999999999999999     666999999999999999999  


Q ss_pred             CCCCCCcEEE
Q 029248          177 PAVPETAIYF  186 (196)
Q Consensus       177 ~~ip~~~I~~  186 (196)
                      .|++.++|.+
T Consensus        94 ~G~k~k~i~~  103 (104)
T COG0023          94 KGFKVKNIGI  103 (104)
T ss_pred             cCCchhhccc
Confidence            4999999875

>cd00474 SUI1_eIF1 The SUI1/eIF1 (eukaryotic initiation factor 1) fold is found in eukaryotes, archaea, and some bacteria and is thought to play an important role in accurate initiator codon recognition during translation initiation

Probab=99.89  E-value=4.5e-23  Score=150.11  Aligned_cols=76  Identities=37%  Similarity=0.442  Sum_probs=70.9

Q ss_pred             cEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCc
Q 029248          104 EVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETA  183 (196)
Q Consensus       104 ~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~  183 (196)
                      .|+|++++|++||+||+|+||+.|++|++++|+.|+++|||||||.     +++|+|||||++.|.+||.++  |+++++
T Consensus         1 ~V~I~~e~R~~~K~VT~I~Gl~~~~~dlk~l~k~lKk~~~cggtv~-----~~~I~lQGD~r~~v~~~L~~~--g~~~~~   73 (77)
T cd00474           1 VVRIRIQQRNGGKTVTTVQGLDLEYADLKKLAKELKKKCACGGTVK-----DEVIELQGDQRKKIKEFLIKM--GFAKDN   73 (77)
T ss_pred             CEEEEEEECCCCccEEEEECCCCchHhHHHHHHHHHHHcCCCcEEe-----cCEEEEeCcHHHHHHHHHHHc--CCCHHH
Confidence            3899999999999999999999999999999999999999999994     489999999999999999884  888888


Q ss_pred             EEE
Q 029248          184 IYF  186 (196)
Q Consensus       184 I~~  186 (196)
                      |.+
T Consensus        74 i~i   76 (77)
T cd00474          74 IKI   76 (77)
T ss_pred             eEe
Confidence            864

This fold, which includes two antiparallel alpha helices packed against the same side of a five-strand beta sheet, is structurally similar to other RNA-binding domains suggesting that SUI1/eIF1 may bind RNA. Point mutations in the yeast eIF1 implicate the protein in maintaining accurate start-site selection but its mechanism of action is unknown.

>TIGR01160 SUI1_MOF2 translation initiation factor SUI1, eukaryotic

Probab=99.88  E-value=9.6e-23  Score=157.44  Aligned_cols=84  Identities=30%  Similarity=0.408  Sum_probs=77.7

Q ss_pred             CCCcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCC
Q 029248          101 ERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVP  180 (196)
Q Consensus       101 ~~~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip  180 (196)
                      ....|+|++.+|+|||+||+|+||+. ++||++|+|.|+++|||||||...++++++|+|||||+++|.+||.++. -++
T Consensus        24 ~~~~I~Iri~qR~grK~VTiI~Gl~~-~~dlk~l~K~lKkk~~cGGsVk~~~~~~~~IelQGD~re~v~~~L~~~g-~~~  101 (110)
T TIGR01160        24 TSNYIHIRIQQRNGRKTLTTVQGLPK-EYDLKKIVKALKKEFACNGTVIEDPEMGEVIQLQGDQRKNVCEFLISQG-LLK  101 (110)
T ss_pred             ccceEEEEEEEccCCccEEEEeccCC-hHHHHHHHHHHHHHhCCCceEEeCCCCCCEEEEeCcHHHHHHHHHHHcC-CCC
Confidence            36689999999999999999999994 9999999999999999999999888888999999999999999999974 578


Q ss_pred             CCcEEE
Q 029248          181 ETAIYF  186 (196)
Q Consensus       181 ~~~I~~  186 (196)
                      +++|.+
T Consensus       102 ~~~i~v  107 (110)
T TIGR01160       102 KDQIKI  107 (110)
T ss_pred             HHHeee
Confidence            888875

Alternate name: MOF2. A similar protein family (see TIGRFAMs model TIGR01158) is found in prokaryotes. The human proteins complements a yeast SUI1 mutatation.

>PRK00939 translation initiation factor Sui1; Reviewed

Probab=99.88  E-value=1.2e-22  Score=154.33  Aligned_cols=77  Identities=30%  Similarity=0.443  Sum_probs=72.2

Q ss_pred             CCcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCC
Q 029248          102 RQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPE  181 (196)
Q Consensus       102 ~~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~  181 (196)
                      .+.|+|++++|+|||+||+|+||+.|++|++++++.|+++|||||||     ++++|+|||||+++|.+||.+ + |+|.
T Consensus        23 ~~~i~I~~ekr~~gK~VTiI~Gl~~~~~~lk~l~k~lKk~~gcGgsv-----k~~~I~iQGD~r~~v~~~L~~-~-G~~~   95 (99)
T PRK00939         23 QQRIKIKVDKRRYGKEVTIIEGIDPKDIDLKELAKKLKSKLACGGTV-----KDGRIELQGDHRERVKELLIK-M-GFSE   95 (99)
T ss_pred             CceEEEEEEecCCCceEEEEeCCCCcchhHHHHHHHHHHHhCCCceE-----ECCEEEEeCcHHHHHHHHHHH-c-CCCh
Confidence            47899999999999999999999999999999999999999999999     456899999999999999987 4 9999


Q ss_pred             CcEE
Q 029248          182 TAIY  185 (196)
Q Consensus       182 ~~I~  185 (196)
                      ++|+
T Consensus        96 ~~i~   99 (99)
T PRK00939         96 ENIE   99 (99)
T ss_pred             hhcC
Confidence            9885

>TIGR01158 SUI1_rel translation initation factor SUI1, putative, prokaryotic

Probab=99.83  E-value=2e-20  Score=142.53  Aligned_cols=77  Identities=31%  Similarity=0.482  Sum_probs=71.4

Q ss_pred             CCCcEEEEEEee-cCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCC
Q 029248          101 ERQEVVIEKVVR-NKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAV  179 (196)
Q Consensus       101 ~~~~I~I~~~~R-~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~i  179 (196)
                      ..+.|+|++++| +++|.||+|+||+.|++|++++++.|+++||||+||     ++++|+|||||++.|.+||.++  |+
T Consensus        22 ~~~~i~i~~e~rgr~gK~VTvV~Gl~~~~~~l~~l~k~LKk~~gcGgtv-----k~~~IeiQGD~~~~v~~~L~~~--G~   94 (101)
T TIGR01158        22 EDQVVRIQRETRGRKGKGVTIIEGLDLSDIDLKELAKELKSKCGCGGTV-----KDGVIEIQGDHRDRVKDLLEKK--GF   94 (101)
T ss_pred             CCceEEEEEEEecCCCCEEEEEeCCcCchhhHHHHHHHHHHHhcCCeeE-----eCCEEEEeCcHHHHHHHHHHHc--CC
Confidence            468899999999 799999999999999999999999999999999999     5679999999999999999883  88


Q ss_pred             CCCcE
Q 029248          180 PETAI  184 (196)
Q Consensus       180 p~~~I  184 (196)
                      |.++|
T Consensus        95 ~~k~~   99 (101)
T TIGR01158        95 KVKLI   99 (101)
T ss_pred             Ceeec
Confidence            87765

This family of archaeal and bacterial proteins is homologous to the eukaryotic translation intiation factor SUI1 involved in directing the ribosome to the proper start site of translation by functioning in concert with eIF-2 and the initiator tRNA-Met.

>KOG2522 consensus Filamentous baseplate protein Ligatin, contains PUA domain [Translation, ribosomal structure and biogenesis]

Probab=99.79  E-value=6.2e-20  Score=168.88  Aligned_cols=98  Identities=23%  Similarity=0.379  Sum_probs=93.6

Q ss_pred             CccCCCCcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCC-CCceEEEcCCchHHHHHHHhhh
Q 029248           97 IKKKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPT-EKEQIDVQGDISYDIVEFITDT  175 (196)
Q Consensus        97 ~kk~~~~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~-~~~eI~IQGD~~~~v~~~L~~~  175 (196)
                      ++||..++|.|..+.|.|||.||.|+||+.|+||+..+|..|+++|+||+||...|+ ++-+|+|||+|.+.|.++|.+.
T Consensus       461 vkKgs~ppi~i~te~RagnKkVT~V~nle~fgiDp~S~aa~Lqk~c~aSTtv~e~pg~kg~eVqvQGnqih~iadlL~k~  540 (560)
T KOG2522|consen  461 VKKGSLPPIKIITEMRAGNKKVTRVSNLEVFGIDPESLAADLQKICSASTTVSESPGFKGAEVQVQGNQIHSIADLLNKS  540 (560)
T ss_pred             eecCCCCceEEeehhhccCceEEEEccceeeccCHHHHHHHHHHHeeeeeecccCCCCCCceEEEecchhhHHHHHHHHh
Confidence            689999999999999999999999999999999999999999999999999999888 4579999999999999999999


Q ss_pred             CCCCCCCcEEEccccccCCC
Q 029248          176 WPAVPETAIYFIEDGKKVAA  195 (196)
Q Consensus       176 ~~~ip~~~I~~~~~~Kkkk~  195 (196)
                      | |||.++|+++++.+|||+
T Consensus       541 y-gipkK~I~gleka~Kkkk  559 (560)
T KOG2522|consen  541 Y-GIPKKWIDGLEKAKKKKK  559 (560)
T ss_pred             h-CCCHHHHhHHHHhhcccC
Confidence            9 999999999999888875

>KOG1770 consensus Translation initiation factor 1 (eIF-1/SUI1) [Translation, ribosomal structure and biogenesis]

Probab=99.79  E-value=3.8e-19  Score=135.59  Aligned_cols=84  Identities=30%  Similarity=0.426  Sum_probs=78.7

Q ss_pred             CCCcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCC
Q 029248          101 ERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVP  180 (196)
Q Consensus       101 ~~~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip  180 (196)
                      ....|||++.+|+|||++|+|+||.. .+|++.+.+.|+|.|||+|+|+++|+-++.|++|||++++|.+||.... .+.
T Consensus        26 ~~~~ihIRIQQRnGrKtlTtVQgi~~-Eyd~kril~~lKKef~CnGtvved~e~gevIQLqGDqR~nv~~fl~~~g-~~k  103 (112)
T KOG1770|consen   26 TEKYIHIRIQQRNGRKTLTTVQGIPM-EYDLKKILKSLKKEFACNGTVVEDPEYGEVIQLQGDQRKNVCQFLVQVG-LVK  103 (112)
T ss_pred             ccceEEEEEEeeCCceEEEEecCChh-hhhHHHHHHHHHHhccCCCeEecCcccCceEEeccchhhhHHHHHHHhc-ccc
Confidence            34599999999999999999999998 7999999999999999999999999999999999999999999999986 788


Q ss_pred             CCcEEE
Q 029248          181 ETAIYF  186 (196)
Q Consensus       181 ~~~I~~  186 (196)
                      +++|.+
T Consensus       104 ~~~iki  109 (112)
T KOG1770|consen  104 KDNIKI  109 (112)
T ss_pred             ccceee
Confidence            888875

>PRK06824 translation initiation factor Sui1; Validated

Probab=99.74  E-value=4.2e-18  Score=133.10  Aligned_cols=69  Identities=20%  Similarity=0.341  Sum_probs=64.2

Q ss_pred             CCcEEEEEEee-cCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhh
Q 029248          102 RQEVVIEKVVR-NKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDT  175 (196)
Q Consensus       102 ~~~I~I~~~~R-~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~  175 (196)
                      ...|+|++++| +++|.||+|+||..++.|+++|+|.|+++|+||+||     ++++|+|||||++.|.+||.++
T Consensus        40 ~~~vri~~~~kgr~gK~VTvI~Gl~~~~~dlk~l~K~LKkk~gcGGtv-----kd~~IeiQGD~r~~v~~~L~~~  109 (118)
T PRK06824         40 DGIVRVRRETKGRGGKTVTVITGVPLAEDALKELAKELKRRCGTGGTL-----KDGVIEIQGDHVELLLAELLKR  109 (118)
T ss_pred             CceEEEEEEEccCCCceEEEEeCCcCCHHHHHHHHHHHHHHhcCCceE-----ecCEEEEcCcHHHHHHHHHHHC
Confidence            45899988876 689999999999999999999999999999999999     6689999999999999999885

>PRK07451 translation initiation factor Sui1; Validated

Probab=99.73  E-value=6.4e-18  Score=131.50  Aligned_cols=70  Identities=23%  Similarity=0.407  Sum_probs=61.8

Q ss_pred             CCCcEEEEEEe-ecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhh
Q 029248          101 ERQEVVIEKVV-RNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDT  175 (196)
Q Consensus       101 ~~~~I~I~~~~-R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~  175 (196)
                      ..+.|.|++++ ++++|.||+|+||..++.|+++|+|.|+++|+||+||     ++++|+|||||+++|.+||.++
T Consensus        36 ~~~~irI~~~r~gR~GK~VTvV~Gl~~~~~dlk~LaK~LK~k~gcGGtv-----kd~~IelQGD~r~~v~~~L~~~  106 (115)
T PRK07451         36 QQQNLRVQATRSGRKGKTVTVITGFQHKPETLAKLLKQLKTQCGSGGTV-----KDNTIEIQGDHRQKILEILIKL  106 (115)
T ss_pred             cceeEEEEEEecCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhcCCceE-----cCCEEEEcCcHHHHHHHHHHHC
Confidence            35667777543 3467999999999999999999999999999999999     7789999999999999999885

>PRK09019 translation initiation factor Sui1; Validated

Probab=99.72  E-value=1.1e-17  Score=128.90  Aligned_cols=70  Identities=26%  Similarity=0.369  Sum_probs=63.0

Q ss_pred             CCCcEEEEEEee-cCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhh
Q 029248          101 ERQEVVIEKVVR-NKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDT  175 (196)
Q Consensus       101 ~~~~I~I~~~~R-~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~  175 (196)
                      ....|.|+++++ +++|.||+|+||.....|+++|||.|+++||||+||     .+++|+|||||++.|.+||.++
T Consensus        29 ~~~~vri~~~r~gRkGK~VTiI~Gl~~~~~dlk~l~K~lKkk~gcGGtv-----k~~~IelQGD~r~~v~~~L~~~   99 (108)
T PRK09019         29 GDGIVRIQRQTSGRKGKGVCLITGLDLDDAELKKLAAELKKKCGCGGAV-----KDGVIEIQGDKRDLLKSLLEAK   99 (108)
T ss_pred             cCceEEEEEecCCCCCCeEEEEeCCcCCHHHHHHHHHHHHHHhcCCCeE-----EcCEEEEcCcHHHHHHHHHHHC
Confidence            456888887765 367899999999989999999999999999999999     5689999999999999999885

>PF05046 Img2: Mitochondrial large subunit ribosomal protein (Img2); InterPro: IPR007740 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms

Probab=97.53  E-value=0.00044  Score=51.32  Aligned_cols=65  Identities=14%  Similarity=0.265  Sum_probs=50.4

Q ss_pred             EEEEEEee-cCCeeEEEEEccCCCCCCHHHHHHHHhhhcccce------eeeeCCCCCceEEEcCCchHHHHHHHhhh
Q 029248          105 VVIEKVVR-NKRKCITIVKGLDLFGVKLSDASKKLGKKFATGA------SVVKGPTEKEQIDVQGDISYDIVEFITDT  175 (196)
Q Consensus       105 I~I~~~~R-~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~------SV~k~~~~~~eI~IQGD~~~~v~~~L~~~  175 (196)
                      +=|....+ +|.+.+|+|+-++.   |+..|.++|++.+.-..      .|.   .-...|.|+||+..+|.+||.++
T Consensus        14 LPVY~~~k~~g~~~~T~IrkI~G---D~~aL~~dL~~~l~~~~~~~~~~~V~---~~~g~i~IkG~~~~~Vk~wL~~~   85 (87)
T PF05046_consen   14 LPVYLDIKNGGNRKITVIRKIEG---DIWALKKDLRKFLGEKPKKKIDVRVN---ELTGHIEIKGDHVEEVKKWLLEK   85 (87)
T ss_pred             ccEEEEEeCCCcEeEEEEEeecC---CHHHHHHHHHHHhhhhcCCCcceEEe---ecCCEEEEcCccHHHHHHHHHHC
Confidence            33444444 47899999999998   99999999999886433      332   24579999999999999999874

The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family of proteins has been identified as part of the mitochondrial large ribosomal subunit in Saccharomyces cerevisiae [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome

>PRK03988 translation initiation factor IF-2 subunit beta; Validated

Probab=93.77  E-value=0.15  Score=41.03  Aligned_cols=66  Identities=18%  Similarity=0.242  Sum_probs=52.3

Q ss_pred             CCCcEEEEEEeecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC
Q 029248          101 ERQEVVIEKVVRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  176 (196)
Q Consensus       101 ~~~~I~I~~~~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~  176 (196)
                      ..++..+.++   |+|  |+|.+|...    .-+..-+.+.|.+-+|+.+++     .++..+|+|.+.....+-++..|
T Consensus        29 ~~p~~~v~~e---G~k--Tvi~Nf~~I~~~L~R~~~hv~ky~~~ELgt~g~i-----~~~~lii~G~~~~~~i~~~L~~y   98 (138)
T PRK03988         29 EVPKPDVRIE---GNR--TIIRNFKEIADRLNRDPKHVAKFLLKELGTAGNI-----EGGRLILQGKFSPRVINEKIDRY   98 (138)
T ss_pred             eCCCCeEEEE---cCc--EEEecHHHHHHHHCCCHHHHHHHHHHHhCCceee-----cCCEEEEEEeeCHHHHHHHHHHH
Confidence            3566666666   444  999998753    568999999999999999999     34899999999887777666655

>TIGR00311 aIF-2beta translation initiation factor aIF-2, beta subunit, putative

Probab=93.70  E-value=0.16  Score=40.63  Aligned_cols=66  Identities=17%  Similarity=0.175  Sum_probs=51.8

Q ss_pred             CCCcEEEEEEeecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC
Q 029248          101 ERQEVVIEKVVRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  176 (196)
Q Consensus       101 ~~~~I~I~~~~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~  176 (196)
                      ..++..+.++   |+|  |+|.+|...    .-+..-+.|.|..-+++.+++     .++..+|+|.+.....+-++..|
T Consensus        24 ~mP~~~v~~e---G~k--Tvi~Nf~~Ia~~L~R~~~~v~ky~~~ELgt~g~i-----~~~rlii~G~~~~~~i~~~L~~y   93 (133)
T TIGR00311        24 EVPKAYIVIE---GNR--TIIQNFREVAKALNRDEQHLLKYLLKELGTAGNL-----EGGRLILQGKFTHFLLNERIEDY   93 (133)
T ss_pred             cCCCceEEEE---cCc--EEEecHHHHHHHHCCCHHHHHHHHHHHhCCCcee-----cCCEEEEEeecCHHHHHHHHHHH
Confidence            3556666666   444  999998753    568999999999999999999     34799999999987777666655

>smart00653 eIF2B_5 domain present in translation initiation factor eIF2B and eIF5

Probab=93.33  E-value=0.23  Score=38.44  Aligned_cols=67  Identities=12%  Similarity=0.096  Sum_probs=51.9

Q ss_pred             CCcEEEEEEeecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC
Q 029248          102 RQEVVIEKVVRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  176 (196)
Q Consensus       102 ~~~I~I~~~~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~  176 (196)
                      .++..+.++   |++ -|+|.+|...    .-++.-+.|.|..-+++.+++    ++.+..+|+|.+.....+-++..|
T Consensus         6 ~p~~~v~~e---G~~-kTvi~Nf~~I~~~L~R~p~hv~kyl~~ELgt~g~i----d~~~rlii~G~~~~~~i~~~l~~y   76 (110)
T smart00653        6 MPPPQVLRE---GKG-KTVIVNFADIAKALNRPPDHVLKFLLAELGTQGSI----DGKGRLIVNGRFTPKKLQDLLRRY   76 (110)
T ss_pred             cCCCeEEEE---cCC-eEEEEcHHHHHHHHCCCHHHHHHHHHHHhCCceeE----CCCCeEEEEEeeCHHHHHHHHHHH
Confidence            455566666   433 6889998753    568999999999999999999    455899999999887777666555

>PRK14434 acylphosphatase; Provisional

Probab=92.06  E-value=0.63  Score=34.70  Aligned_cols=69  Identities=19%  Similarity=0.199  Sum_probs=52.3

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcc-cceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCC-CCcEEEcc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFA-TGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVP-ETAIYFIE  188 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfa-cg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip-~~~I~~~~  188 (196)
                      -.|+|.-. |+-.......++++++ =.|.|...++|.-+|.+||+-.+.|..|+.....+-| ...|+-++
T Consensus         6 i~v~G~VQ-GVGFR~fv~~~A~~lg~l~G~V~N~~dGsVei~~qG~~~~~l~~f~~~l~~g~pp~a~V~~v~   76 (92)
T PRK14434          6 MIVSGRVQ-GVGFRYSVYSLALEIGDIYGRVWNNDDGTVEILAQSDDSAKLAKFIQEIRKGPSKWAKVTYVD   76 (92)
T ss_pred             EEEEEeec-ceeEhHHHHHHHHHcCCcEEEEEECCCCCEEEEEEcCCHHHHHHHHHHHhcCCCCCEEEEEEE
Confidence            45677777 8888899999999999 9999987777778999999865566666655544654 56665543

>PRK14451 acylphosphatase; Provisional

Probab=91.63  E-value=0.86  Score=33.72  Aligned_cols=67  Identities=15%  Similarity=0.099  Sum_probs=52.0

Q ss_pred             EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      .|+|.-. |+-....+..++.+++-.|.|-..++|.-+|.+||+- +.|.+|+.....+-|...|+.++
T Consensus         8 ~V~G~VQ-GVGFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~-~~i~~f~~~l~~gp~~a~V~~v~   74 (89)
T PRK14451          8 YISGRVQ-GVWFRASAKKLAEQLMISGWARNLADGRVEVFACGKE-DKLEEFYTWLQKGPLNARVDVCT   74 (89)
T ss_pred             EEEEeeC-CcCchHHHHHHHHHhCCEEEEEECCCCCEEEEEEECH-HHHHHHHHHHhhCCCceEEEEEE
Confidence            3788877 8999999999999999999998888888999999987 44777766555343445555543

>PRK14449 acylphosphatase; Provisional

Probab=91.49  E-value=0.93  Score=33.48  Aligned_cols=68  Identities=15%  Similarity=0.056  Sum_probs=53.1

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      -+|+|.-. |+-.......++.+++=.|.|...+++.-+|.+||+- +.|.+|+.....+-|...|+.++
T Consensus         7 i~v~G~VQ-GVGFR~fv~~~A~~lgl~G~V~N~~dG~Vei~~~G~~-~~v~~f~~~l~~~~~~a~V~~i~   74 (90)
T PRK14449          7 LRITGHVQ-GVGLRYSVYQKAVSLGITGYAENLYDGSVEVVAEGDE-ENIKELINFIKTGLRWARVDNVE   74 (90)
T ss_pred             EEEEEeec-CcChHHHHHHHHHHcCCEEEEEECCCCeEEEEEEeCH-HHHHHHHHHHhhCCCceEEEEEE
Confidence            45688776 8999999999999999999998888888999999987 44777766655454566666543

>PRK14444 acylphosphatase; Provisional

Probab=91.37  E-value=1.1  Score=33.40  Aligned_cols=67  Identities=9%  Similarity=0.118  Sum_probs=50.4

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      -.|+|.-. |+-....+..++.+++=+|.|...++|.-+|.+||+- +.|.+|+.....+-|...|+.+
T Consensus         8 i~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~qG~~-~~i~~f~~~l~~gp~~a~V~~i   74 (92)
T PRK14444          8 VFISGRVQ-GVNFRAYTRDRAREAGVKGWVRNLSDGRVEAVFEGSR-PAVQKMISWCYSGPSHARVERV   74 (92)
T ss_pred             EEEEEeeC-CcCcHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCH-HHHHHHHHHHHhCCCCcEEEEE
Confidence            45688877 8899999999999999999998777777899999995 4466666554423234455544

>PRK14437 acylphosphatase; Provisional

Probab=90.82  E-value=1  Score=34.79  Aligned_cols=67  Identities=16%  Similarity=0.225  Sum_probs=51.1

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      -.|+|.-. |+-...+...++.+++=.|.|...++|.-+|.+||+-. .|.+|+.....+-|...|+-+
T Consensus        27 i~V~G~VQ-GVGFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~-~ie~f~~~L~~gP~~a~V~~i   93 (109)
T PRK14437         27 ATVSGKVQ-GVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGERD-SIMILTEWLWEGPPQAAVSNV   93 (109)
T ss_pred             EEEEEecC-CcCchHHHHHHHHHhCCeEEEEECCCCCEEEEEEECHH-HHHHHHHHHHhCCCceEEEEE
Confidence            35688877 89999999999999999999988888889999999875 566655444434344455544

>PRK12336 translation initiation factor IF-2 subunit beta; Provisional

Probab=90.74  E-value=0.59  Score=39.58  Aligned_cols=65  Identities=15%  Similarity=0.154  Sum_probs=50.9

Q ss_pred             CCcEEEEEEeecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC
Q 029248          102 RQEVVIEKVVRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  176 (196)
Q Consensus       102 ~~~I~I~~~~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~  176 (196)
                      .+...+.++.   +|  |+|.+|...    .-+..-+.|.|..-|++.+++     .++..+|+|.+...-.+-++..|
T Consensus        26 ~p~~~v~~eG---~k--T~i~N~~~i~~~l~R~~~~~~ky~~~ELgt~~~~-----~~~~~ii~G~~~~~~i~~~l~~y   94 (201)
T PRK12336         26 IPEPKIFIEG---KT--TILTNFGEIADALNRDPDHLMKFLQRELGTAGKI-----EGGRAVFNGKFTEEDIQAAIDAY   94 (201)
T ss_pred             cCCceEEEEc---Cc--EEEecHHHHHHHHCCCHHHHHHHHHHHhCCccee-----cCCEEEEEeeeCHHHHHHHHHHH
Confidence            5556666663   33  999998753    567999999999999999999     34689999999887777666655

>PRK14425 acylphosphatase; Provisional

Probab=90.62  E-value=0.93  Score=33.88  Aligned_cols=68  Identities=16%  Similarity=0.144  Sum_probs=49.4

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      -.|+|.-. |+-.......++.+++=.|.|...++|.-+|++||+-.. |.+|+.....+-|...|+-++
T Consensus        10 ~~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dGsVei~~qG~~~~-le~f~~~l~~gp~~a~V~~i~   77 (94)
T PRK14425         10 VRITGRVQ-GVGFRDWTRDEAERLGLTGWVRNESDGSVTALIAGPDSA-ISAMIERFRRGPPGASVSGVE   77 (94)
T ss_pred             EEEEEeEe-cccchHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHH-HHHHHHHHhhCCCceEEEEEE
Confidence            45677776 888899999999999999999888888899999997654 444544433243445555443

>PRK14436 acylphosphatase; Provisional

Probab=90.36  E-value=1.4  Score=32.77  Aligned_cols=67  Identities=16%  Similarity=0.152  Sum_probs=51.5

Q ss_pred             EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      .|+|.-. |+-.......++.+++=.|.|...+++.-+|.+||+- +.|.+|+.....+-|...|+.++
T Consensus         9 ~v~G~VQ-GVGFR~~v~~~A~~l~l~G~V~N~~dG~Vei~~qG~~-~~i~~f~~~l~~gp~~a~V~~v~   75 (91)
T PRK14436          9 RIYGRVQ-GVGFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDE-ERVEALIGWAHQGPPLARVTRVE   75 (91)
T ss_pred             EEEEeeC-CcCcHHHHHHHHHHcCCEEEEEECCCCcEEEEEEcCH-HHHHHHHHHHhhCCCceEEEEEE
Confidence            5677776 8888999999999999999998888888899999987 44777776554344455565543

>KOG4034 consensus Uncharacterized conserved protein NOF (Neighbor of FAU) [Function unknown]

Probab=89.95  E-value=0.91  Score=37.60  Aligned_cols=70  Identities=14%  Similarity=0.182  Sum_probs=45.8

Q ss_pred             CcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhc--ccceeeee-CCCCCceEEEcCCchHHHHHHHhhhC
Q 029248          103 QEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKF--ATGASVVK-GPTEKEQIDVQGDISYDIVEFITDTW  176 (196)
Q Consensus       103 ~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkf--acg~SV~k-~~~~~~eI~IQGD~~~~v~~~L~~~~  176 (196)
                      -+|-..+..| |+|.+|+|+.++.   |+-.|-+.|...+  .=+.|+.. ...-...|.+-||+.+.|.+||.++.
T Consensus        96 lPVYl~~k~~-G~k~lT~IRkVeG---Di~aLe~DL~s~L~~~~~~s~~t~VnelsgqI~~~g~~v~~vr~~L~eKG  168 (169)
T KOG4034|consen   96 LPVYLDYKQR-GNKILTVIRKVEG---DIWALENDLRSTLEMSPKKSYATHVNELSGQIVLKGNHVDTVREWLQEKG  168 (169)
T ss_pred             cceEEeeecC-CcEEEEEEEeecc---cHHHHHHHHHHHHhhccCCChhhhhhhhcceEEEeCChHHHHHHHHHHcc
Confidence            3444444433 8899999999997   5555555555432  22333321 11234799999999999999999863

>PF01873 eIF-5_eIF-2B: Domain found in IF2B/IF5; InterPro: IPR002735 The beta subunit of archaeal and eukaryotic translation initiation factor 2 (IF2beta) and the N-terminal domain of translation initiation factor 5 (IF5) show significant sequence homology []

Probab=89.93  E-value=0.33  Score=38.36  Aligned_cols=69  Identities=14%  Similarity=0.162  Sum_probs=50.5

Q ss_pred             CCCCcEEEEEEeecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhh
Q 029248          100 KERQEVVIEKVVRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDT  175 (196)
Q Consensus       100 ~~~~~I~I~~~~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~  175 (196)
                      =..+++.|.++.+    .-|+|.+|...    .-++.-+++.|..-+++.+++    ++.+...|+|.+...-.+-++..
T Consensus        17 ~kmP~~~v~~eG~----~KTvi~Nf~dI~~~L~R~p~~~~ky~~~ELgt~~~i----d~~~~lii~G~~~~~~i~~~L~~   88 (125)
T PF01873_consen   17 YKMPPPQVKIEGK----KKTVIVNFVDICKALNRDPEHVLKYFGKELGTQGSI----DGKGRLIINGRFSSKQIQDLLDK   88 (125)
T ss_dssp             -CCCT--EEEETS----TEEEETTHHHHHHHHTSSHHHHHHHHHHHSSSEEEE----ETTTEEEEESSSSCCHHHHHHHH
T ss_pred             eecCCCeEEEEcc----ceeeeecHHHHHHHHCCCHHHHHHHHHHHHCCceEE----CCCCEEEEEEecCHHHHHHHHHH
Confidence            3467777777744    35889998853    458999999999999999999    34489999999876655554444


Q ss_pred             C
Q 029248          176 W  176 (196)
Q Consensus       176 ~  176 (196)
                      |
T Consensus        89 f   89 (125)
T PF01873_consen   89 F   89 (125)
T ss_dssp             H
T ss_pred             H
Confidence            4

Archaeal IF2beta contains two independent structural domains: an N-terminal mixed alpha/beta core domain (topological similarity to the common core of ribosomal proteins L23 and L15e), and a C-terminal domain consisting of a zinc-binding C4 finger []. Archaeal IF2beta is a ribosome-dependent GTPase that stimulates the binding of initiator Met-tRNA(i)(Met) to the ribosomes, even in the absence of other factors []. The C-terminal domain of eukaryotic IF5 is involved in the formation of the multi-factor complex (MFC), an important intermediate for the 43S pre-initiation complex assembly []. IF5 interacts directly with IF1, IF2beta and IF3c, which together with IF2-bound Met-tRNA(i)(Met) form the MFC. This entry represents both the N-terminal and zinc-binding domains of IF2, as well as a domain in IF5.; GO: 0003743 translation initiation factor activity, 0006413 translational initiation; PDB: 2DCU_B 2D74_B 2E9H_A 2G2K_A 1NEE_A 3CW2_L 2QMU_C 3V11_C 2NXU_A 2QN6_C ....

>PRK14422 acylphosphatase; Provisional

Probab=89.74  E-value=1.8  Score=32.32  Aligned_cols=68  Identities=9%  Similarity=-0.014  Sum_probs=51.8

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      -.|+|.-. |+-...+...++.+++=.|.|...++|.-+|.+||+-.. |.+|+.....+-|...|+-++
T Consensus        10 ~~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~-i~~f~~~l~~gp~~a~V~~i~   77 (93)
T PRK14422         10 AWVHGHVQ-GVGFRWWTRSRALELGLTGYAANLADGRVQVVAEGPRAA-CEKLLQLLRGDDTPGRVDKVV   77 (93)
T ss_pred             EEEEEeeC-CcCcHHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHH-HHHHHHHHHhCCCCcEEEEEE
Confidence            45678777 889999999999999999999888888889999998754 666665544453445555543

>PRK14443 acylphosphatase; Provisional

Probab=89.56  E-value=1.3  Score=33.20  Aligned_cols=67  Identities=16%  Similarity=0.178  Sum_probs=49.7

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCC-CCcEEEc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVP-ETAIYFI  187 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip-~~~I~~~  187 (196)
                      -.|+|.-. |+-....+..++.+++=.|.|...+++.-+|.+||+-.. |.+|+.....+-| ...|+-+
T Consensus         8 i~v~G~VQ-GVGFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~-l~~f~~~l~~g~p~~a~V~~v   75 (93)
T PRK14443          8 LRVTGFVQ-GVGFRYTTKHVAYKYDISGTVKNLDDGSVEIHAIAEEEN-LNKFIDAIKKGPSPGCRIEHV   75 (93)
T ss_pred             EEEEEeeC-CccCcHHHHHHHHHcCCEEEEEECCCCEEEEEEECCHHH-HHHHHHHHhcCCCCcEEEEEE
Confidence            45677777 888899999999999999999887888899999998433 5555544443554 4555544

>PRK14438 acylphosphatase; Provisional

Probab=89.51  E-value=1.4  Score=32.70  Aligned_cols=68  Identities=18%  Similarity=0.186  Sum_probs=51.6

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      -.|+|.-. |+-....+..++.+++=.|.|...++|.-+|.+||+- +.|.+|+.....+-|...|+.++
T Consensus         7 i~v~G~VQ-GVGFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~-~~i~~f~~~l~~gp~~a~V~~v~   74 (91)
T PRK14438          7 VTVKGLVQ-GVAFRHHTQQTAQRLNVSGWVKNLPNGSVQGCFEGEE-TDVAALIDWCHHGPSRARVSGVI   74 (91)
T ss_pred             EEEEEecC-CcCccHHHHHHHHHcCCEEEEEECCCCEEEEEEEECH-HHHHHHHHHHhhCCCCcEEEEEE
Confidence            45678777 8888999999999999999998887777899999986 44777665554343445565543

>PRK14446 acylphosphatase; Provisional

Probab=89.46  E-value=1.2  Score=33.09  Aligned_cols=67  Identities=10%  Similarity=0.187  Sum_probs=51.5

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      -.|+|.-. |+-..-+...++++++=.+.|...++|.-+|.+||+-. .|.+|+.....+-|...|+.+
T Consensus         6 i~v~G~VQ-GVGFR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~-~l~~f~~~l~~gP~~a~V~~v   72 (88)
T PRK14446          6 FVVSGVVQ-GVWYRASTRERAVALGLVGHARNQADGSVEVVAAGSAA-ALEALEAWLWQGPPAATVAAV   72 (88)
T ss_pred             EEEEEecC-CeeEhHHHHHHHeeCCeEEEEEECCCCCEEEEEEeCHH-HHHHHHHHHhhCCCceEEEEE
Confidence            35678777 88889999999999999999988888889999999864 566665554434455556554

>PRK14440 acylphosphatase; Provisional

Probab=89.35  E-value=1.9  Score=32.00  Aligned_cols=67  Identities=12%  Similarity=0.118  Sum_probs=49.9

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      -+|+|.-. |+-........+.+++=.|.|...+++.-+|.+||+- +.|.+|+.....+=|...|+.+
T Consensus         7 ~~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~-~~v~~f~~~l~~gp~~a~V~~i   73 (90)
T PRK14440          7 ARVYGLVQ-GVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYE-EALSKLLERIKQGPPAAEVEKV   73 (90)
T ss_pred             EEEEEeEe-ccCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCH-HHHHHHHHHHhhCCCCcEEEEE
Confidence            45677666 7888889999999999999998887788899999987 6677776555434333445543

>PRK14452 acylphosphatase; Provisional

Probab=89.34  E-value=2.1  Score=32.90  Aligned_cols=68  Identities=10%  Similarity=0.073  Sum_probs=51.4

Q ss_pred             EEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          118 ITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       118 VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      --.|+|.-. |+-....+..++.+++=.|.|...++|.-+|.+||+.. .|.+|+.-...+-|...|+.+
T Consensus        23 ~i~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dGsVeI~~qG~~~-~ve~F~~~l~~gP~~A~V~~v   90 (107)
T PRK14452         23 RFLIEGRVQ-GVGFRASCCRRALDLGLSGWVRNLSDGSVEVQAEGPPL-ALSELRAWCERGPPGARVKRV   90 (107)
T ss_pred             EEEEEEeec-CcChhHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHH-HHHHHHHHHhcCCCCcEEEEE
Confidence            356788887 89999999999999999999988888889999999964 566664333334345555544

>PRK14445 acylphosphatase; Provisional

Probab=89.23  E-value=1.4  Score=32.53  Aligned_cols=68  Identities=22%  Similarity=0.231  Sum_probs=51.3

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      -+|+|.-. |+-.......++.+++=.|.|-..++|.-+|.+||+-.. |.+|+.....+=|...|+.++
T Consensus         8 ~~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~-l~~f~~~l~~gP~~a~V~~i~   75 (91)
T PRK14445          8 LIVSGLVQ-GVGFRMFIDRAASELNLSGWVRNLPDGTVEIEAQGSSGM-IDELIKQAERGPSRSSVTSIM   75 (91)
T ss_pred             EEEEEEEc-CcCChHHHHHHHhhCCCEEEEEECCCCeEEEEEEECHHH-HHHHHHHHHhCCCCcEEEEEE
Confidence            45677777 888899999999999999999888888889999998743 666665554232345565543

>PRK14442 acylphosphatase; Provisional

Probab=89.22  E-value=1.8  Score=32.13  Aligned_cols=67  Identities=10%  Similarity=0.059  Sum_probs=50.7

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      -+|+|.-. |+-....+..++.+++=.|.|...++|.-+|.+||+.. .|.+|+.....+=|...|+.+
T Consensus         8 ~~v~G~VQ-GVGFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~-~i~~f~~~l~~gp~~a~V~~v   74 (91)
T PRK14442          8 AYVGGRVQ-GVGFRQATREEADRLELDGWVRNLDDGRVEVVWEGEED-RAKALERWLGRGPRHAEVSAV   74 (91)
T ss_pred             EEEEEecC-CccccHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHH-HHHHHHHHHhhCCCCeEEEEE
Confidence            45688877 88899999999999999999988888889999999876 466666554423233445544

>PRK14429 acylphosphatase; Provisional

Probab=89.08  E-value=1.5  Score=32.37  Aligned_cols=68  Identities=18%  Similarity=0.118  Sum_probs=50.1

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      -.|+|.-. |+-.......++.+++=.|.|...++|.-+|.+||+-.. |.+|+.....+-|...|+.++
T Consensus         6 ~~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~-i~~f~~~l~~gp~~a~V~~i~   73 (90)
T PRK14429          6 IKLTGKVQ-GVGCRRATLTKARALGVTGYVTNCEDGSVEILAQGSDPA-VDNLIAWCEVGVPCTEVLRVT   73 (90)
T ss_pred             EEEEEeec-CeeeHHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHH-HHHHHHHHhhCCCceEEEEEE
Confidence            34577666 788889999999999999999888878889999998753 555555444463444555543

>PRK14433 acylphosphatase; Provisional

Probab=88.85  E-value=1.9  Score=31.76  Aligned_cols=67  Identities=9%  Similarity=0.090  Sum_probs=50.8

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      -.|+|.-. |+-.......++.+++=.|.|...+++.-+|.+|||-. .|.+|+.....+=|...|+.+
T Consensus         5 i~v~G~VQ-GVGFR~~v~~~A~~~~l~G~V~N~~dG~Vei~~~G~~~-~i~~f~~~l~~gP~~a~V~~i   71 (87)
T PRK14433          5 ALVSGRVQ-GVGYRAFVQKKARELGLSGYAENLSDGRVEVVAEGPKE-ALERLLHWLRRGPRHARVEAV   71 (87)
T ss_pred             EEEEEeee-CcCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECHH-HHHHHHHHHhhCCCCcEEEEE
Confidence            35677666 88889999999999999999988888878999999974 677777665534333445544

>PRK14428 acylphosphatase; Provisional

Probab=88.85  E-value=2  Score=32.49  Aligned_cols=67  Identities=12%  Similarity=0.145  Sum_probs=51.5

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      -.|+|.-. |+-..-.+..++.+++=.|.|-..++|.-+|.+||+- +.|.+||.....+=|...|+.+
T Consensus        12 i~v~G~VQ-GVGFR~fv~~~A~~lgL~G~V~N~~dGsVei~~qG~~-~~i~~fi~~l~~gP~~a~V~~v   78 (97)
T PRK14428         12 IVVTGLVQ-GVGFRYFTVTQARRLGVQGWVRNCRDGSVELEAQGSS-DAVQALVEQLAIGPRWSEVSHV   78 (97)
T ss_pred             EEEEEecC-CccchHHHHHHHHHcCCEEEEEECCCCEEEEEEEcCH-HHHHHHHHHHhhCCCccEEEEE
Confidence            45678777 8899999999999999999998888888999999985 5577776665533344455443

>PRK14435 acylphosphatase; Provisional

Probab=88.71  E-value=1.9  Score=31.90  Aligned_cols=67  Identities=16%  Similarity=0.262  Sum_probs=50.6

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      -.|+|.-. |+-.......++.+++=.|.|...+++.-+|.+||+- +.|.+|+.....+=|...|+-+
T Consensus         6 ~~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~-~~i~~f~~~l~~gp~~a~V~~v   72 (90)
T PRK14435          6 IRVEGIVQ-GVGFRYFTRRVAKSLGVKGYVMNMDDGSVFIHAEGDE-NALRRFLNEVAKGPPAAVVTNV   72 (90)
T ss_pred             EEEEEEeC-CcCChHHHHHHHHHhCCEEEEEECCCCCEEEEEEECH-HHHHHHHHHHhhCCCCcEEEEE
Confidence            45677777 8888999999999999999998888888999999987 4477776555433344445443

>PRK14427 acylphosphatase; Provisional

Probab=88.69  E-value=1.7  Score=32.39  Aligned_cols=68  Identities=9%  Similarity=0.028  Sum_probs=51.4

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      -.|+|.-. |+-...+.+.++.+++=.|.|...+++.-+|.+||+... |.+|+.....+=|...|+-++
T Consensus        10 i~v~G~VQ-GVGFR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~-i~~f~~~l~~~p~~a~V~~i~   77 (94)
T PRK14427         10 ARVFGVVQ-GVGFRYWTMRKAEELGLTGTVRNLDDGSVALVAEGTGEQ-VEKLLDWLNSDRAPGRVERVD   77 (94)
T ss_pred             EEEEEEeC-CcCChHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHH-HHHHHHHHhhCCCCcEEEEEE
Confidence            45677776 888899999999999999999888778789999998743 777765554453344455543

>PRK14420 acylphosphatase; Provisional

Probab=88.58  E-value=2  Score=31.59  Aligned_cols=68  Identities=16%  Similarity=0.101  Sum_probs=51.0

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      -.|+|.-. |+-.......++.+++=.|.|...+++.-+|.+||+- +.|.+|+.....+-|...|+-++
T Consensus         6 ~~v~G~VQ-GVGFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~-~~i~~f~~~l~~~p~~a~V~~i~   73 (91)
T PRK14420          6 IIVDGRVQ-GVGFRYFVQMEADKRKLTGWVKNRDDGTVEIEAEGPE-EALQLFLDAIEKGSPFSKVTDVH   73 (91)
T ss_pred             EEEEEeeC-CcCChHHHHHHHHHcCCEEEEEECCCCcEEEEEEECH-HHHHHHHHHHHhCCCCCEEEEEE
Confidence            45677666 7888888999999999999998888777899999974 66777766554464454565543

>PRK14423 acylphosphatase; Provisional

Probab=87.90  E-value=1.9  Score=31.94  Aligned_cols=67  Identities=12%  Similarity=0.153  Sum_probs=50.5

Q ss_pred             EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      .|+|.-. |+-....+..++.+++=.|.|...++|.-+|.+||+-. .|.+|+.....+-|...|+.++
T Consensus        10 ~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~-~i~~f~~~l~~gp~~a~V~~v~   76 (92)
T PRK14423         10 FVSGRVQ-GVYYRASTRDTARELGVDGWVRNLDDGRVEAVFEGPRD-AVEAMVEWCHEGSPAAVVEDVE   76 (92)
T ss_pred             EEEEecC-CeeehHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHH-HHHHHHHHHHhCCCceEEEEEE
Confidence            4577777 88889999999999999999988877778999999864 5666665544344554555543

>PRK14426 acylphosphatase; Provisional

Probab=87.78  E-value=2.6  Score=31.27  Aligned_cols=67  Identities=10%  Similarity=0.046  Sum_probs=49.9

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCC-CcEEEc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPE-TAIYFI  187 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~-~~I~~~  187 (196)
                      -.|+|.-. |+-.......++.+++=.|.|...+++.-+|.+||+-. .|.+|+.....+.|+ ..|+.+
T Consensus         8 ~~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~-~i~~f~~~l~~g~P~~a~V~~i   75 (92)
T PRK14426          8 AWVYGRVQ-GVGFRYHTQHEALKLGLTGYAKNLDDGSVEVVACGEEE-QVEKLMEWLKEGGPRSARVDRV   75 (92)
T ss_pred             EEEEEeeC-CcCchHHHHHHHHHhCCEEEEEECCCCcEEEEEEeCHH-HHHHHHHHHhcCCCCCeEEEEE
Confidence            35677776 78889999999999999999988888888999999963 366665554445444 345544

>PRK14450 acylphosphatase; Provisional

Probab=87.55  E-value=3.2  Score=30.60  Aligned_cols=66  Identities=17%  Similarity=0.285  Sum_probs=48.6

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCC-ceEEEcCC--chHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEK-EQIDVQGD--ISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~-~eI~IQGD--~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      -+|+|.-. |+-....+..++.+++=.|.|...++|. -+|.+||+  ..+...++|.   .+=|...|+-++
T Consensus         6 ~~v~G~VQ-GVGFR~~v~~~A~~~~l~G~V~N~~dG~~Vei~~~G~~~~v~~f~~~l~---~gp~~a~V~~v~   74 (91)
T PRK14450          6 AIVKGKVQ-GVYFRDFTRTQATRLGLCGYAKNLANGNEVEVVAEGDKDSLLEFLDLLR---SGPPRAEVKEVE   74 (91)
T ss_pred             EEEEEEec-CcCcHHHHHHHHHHcCCEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHh---hCCCCcEEEEEE
Confidence            35777776 8888999999999999999998777775 79999998  4555555553   243445555543

>PRK14447 acylphosphatase; Provisional

Probab=87.52  E-value=2.5  Score=31.61  Aligned_cols=68  Identities=13%  Similarity=0.157  Sum_probs=50.4

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCC-CceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTE-KEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~-~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      -.|+|.-. |+-...+++.++.+++-.|.|...++| .-+|.+||+ .+.|.+|+.....+=|...|+.++
T Consensus         8 ~~v~G~VQ-GVGFR~~~~~~A~~~gl~G~V~N~~dG~~Vei~~qG~-~~~l~~f~~~l~~gp~~a~V~~v~   76 (95)
T PRK14447          8 LFIRGKVQ-GVFFRQSMKEVANRNGVRGWVRNRSDGRTVEAVLEGP-RDAVLKVIEWARVGPPGARVEDVE   76 (95)
T ss_pred             EEEEEecC-CccchHHHHHHHhhcCeEEEEEECCCCCEEEEEEEeC-HHHHHHHHHHHhhCCCCeEEEEEE
Confidence            45688887 899999999999999999999887777 479999998 566666665433233444455543

>PRK14421 acylphosphatase; Provisional

Probab=86.76  E-value=2.8  Score=31.80  Aligned_cols=67  Identities=10%  Similarity=0.085  Sum_probs=49.6

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      -+|+|.-. |+-....+..++.+++=.|.|...++|.-+|.+||+-.. |.+|+.....+=|...|+-+
T Consensus         8 ~~v~G~VQ-GVGFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~-i~~f~~~l~~gP~~a~V~~v   74 (99)
T PRK14421          8 VTIRGRVQ-GVGYRAWVARTAEALGLEGWVRNRRDGSVEALFAGPADA-VAEMIARCRRGPSAARVDAV   74 (99)
T ss_pred             EEEEEeEc-CccchHHHHHHHHHhCCEEEEEECCCCEEEEEEeCCHHH-HHHHHHHHHhCCCCcEEEEE
Confidence            35677777 888899999999999999999877777799999998743 66665544423334455444

>PF00708 Acylphosphatase: Acylphosphatase; InterPro: IPR001792 Acylphosphatase (3

Probab=86.34  E-value=2.3  Score=31.01  Aligned_cols=68  Identities=25%  Similarity=0.288  Sum_probs=50.2

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      -+|+|.-. |+-....++.++.+++=.|.|...+++.-+|++||+- +.|.+||.....+-|...|.-++
T Consensus         8 i~v~G~VQ-GVgFR~~v~~~A~~~gl~G~V~N~~dg~V~i~~~G~~-~~l~~f~~~l~~g~p~a~V~~i~   75 (91)
T PF00708_consen    8 IIVSGRVQ-GVGFRPFVKRIARKLGLTGWVRNLPDGSVEIEAEGEE-EQLEEFIKWLKKGPPPARVDEIE   75 (91)
T ss_dssp             EEEEEETS-SSSHHHHHHHHHHHTT-EEEEEE-TTSEEEEEEEEEH-HHHHHHHHHHHHSSTTSEEEEEE
T ss_pred             EEEEEEEC-cCChhHHHHHHHHHhCCceEEEECCCCEEEEEEEeCH-HHHHHHHHHHHhCCCCcEEEEEE
Confidence            46888777 8999999999999999999998888787999999965 44555554444355656665543

6.1.7 from EC) is an enzyme of approximately 98 amino acid residues that specifically catalyses the hydrolysis of the carboxyl-phosphate bond of acylphosphates [], its substrates including 1,3-diphosphoglycerate and carbamyl phosphate []. The enzyme has a mainly beta-sheet structure with 2 short alpha-helical segments. It is distributed in a tissue-specific manner in a wide variety of species, although its physiological role is as yet unknown []: it may, however, play a part in the regulation of the glycolytic pathway and pyrimidine biosynthesis []. There are two known isozymes. One seems to be specific to muscular tissues, the other, called 'organ-common type', is found in many different tissues. While bacterial and archebacterial hypothetical proteins that are highly similar to that enzyme and that probably possess the same activity. These proteins include: Escherichia coli putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yccX). Bacillus subtilis putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yflL). Archaeoglobus fulgidus putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (O29440 from SWISSPROT). An acylphosphatase-like domain is also found in some prokaryotic hydrogenase maturation HypF carbamoyltransferases [, ].; PDB: 1APS_A 1GXT_A 1GXU_A 2HLT_A 2FHM_A 2HLU_A 3BR8_A 1ULR_A 3TRG_A 2BJD_A ....

>PRK14432 acylphosphatase; Provisional

Probab=85.60  E-value=3.8  Score=30.56  Aligned_cols=68  Identities=13%  Similarity=0.025  Sum_probs=50.9

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEc-CCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQ-GDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQ-GD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      -+|+|.-. |+-.......++.+++=.|.|-..++|.-+|.+| ||- +.|.+|+.....+=|...|+.++
T Consensus         6 ~~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~~G~~-~~v~~f~~~l~~gp~~a~V~~v~   74 (93)
T PRK14432          6 YFISGKVQ-GVGFRFFTEQIANNMKLKGFVKNLNDGRVEIVAFFNTK-EQMKKFEKLLKNGNKYSNIENIE   74 (93)
T ss_pred             EEEEEeec-CeeehHHHHHHHHHhCCEEEEEECCCCCEEEEEEECCH-HHHHHHHHHHHhCCCccEEEEEE
Confidence            45777776 7888899999999999999998888888899998 885 56777766554463344554443

>PRK14448 acylphosphatase; Provisional

Probab=85.58  E-value=4.4  Score=29.95  Aligned_cols=67  Identities=18%  Similarity=0.141  Sum_probs=50.1

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      -.|+|.-. |+-.....+.++.+++=.|.|-..+++.-+|.+||+-. .|.+|+.....+-|...|+-+
T Consensus         6 ~~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~-~v~~f~~~l~~gp~~a~V~~v   72 (90)
T PRK14448          6 FIVYGHVQ-GVGFRYFTWQEATKIGIKGYVKNRPDGSVEVVAVGSDA-QIAAFRDWLQHGPPTAVVCNV   72 (90)
T ss_pred             EEEEEeec-CcchHHHHHHHHHHhCCEEEEEECCCCCEEEEEEeCHH-HHHHHHHHHHhCCCceEEEEE
Confidence            46778777 88999999999999999999988888888999999873 366666554423233444443

>PRK14439 acylphosphatase; Provisional

Probab=85.53  E-value=3.4  Score=34.33  Aligned_cols=69  Identities=13%  Similarity=0.062  Sum_probs=51.3

Q ss_pred             EEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCC-CCcEEEcc
Q 029248          118 ITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVP-ETAIYFIE  188 (196)
Q Consensus       118 VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip-~~~I~~~~  188 (196)
                      --.|+|.-+ |+-.......++.+++=.|.|-..++|.-+|++||+-.. |.+|+.....+-| ...|+.++
T Consensus        78 ~i~VsGrVQ-GVGFR~fv~~~A~qlGLtGwVrNl~DGsVEI~aQG~ee~-Ie~Fi~~L~~~gPp~A~Ve~I~  147 (163)
T PRK14439         78 IAWVYGRVQ-GVGFRYTTQYEAKKLGLTGYAKNLDDGSVEVVACGEEGQ-VEKLMQWLKSGGPRSARVERVL  147 (163)
T ss_pred             EEEEEEeeC-CcCchHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHH-HHHHHHHHhhCCCCCeEEEEEE
Confidence            446788887 899999999999999999999877888899999998744 5555544432234 44555543

>TIGR02174 CXXU_selWTH selT/selW/selH selenoprotein domain

Probab=85.02  E-value=0.81  Score=32.44  Aligned_cols=29  Identities=31%  Similarity=0.661  Sum_probs=21.7

Q ss_pred             eeeEeCCCCCCCccccccCCChhhHHHHHHHhCCCc
Q 029248            8 VRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPEL   43 (196)
Q Consensus         8 ~~V~YC~vCs~P~EYCEfg~~~~kCk~WL~~~~p~l   43 (196)
                      ++|.||.-|+       |.+-+..-.+-|...+|+.
T Consensus         1 V~IeyC~~C~-------y~~Ra~~l~q~L~~~Fp~~   29 (72)
T TIGR02174         1 VEIEYCGSCG-------YKPRAAWLKQELLEEFPDL   29 (72)
T ss_pred             CEEEECCCCC-------ChHHHHHHHHHHHHHCCCC
Confidence            5799999999       6666666666677777754

This model represents a domain found in both bacteria and animals, including animal proteins SelT, SelW, and SelH, all of which are selenoproteins. In a CXXC motif near the N-terminus of the domain, selenocysteine may replace the second Cys. Proteins with this domain may include an insert of about 70 amino acids. This model is broader than the current SelW model pfam05169 in Pfam.

>PRK14441 acylphosphatase; Provisional

Probab=84.71  E-value=4.1  Score=30.29  Aligned_cols=68  Identities=13%  Similarity=0.245  Sum_probs=49.5

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      -.|+|.-. |+-.......++.+++=.|.|...+++.-+|.+||+-. .|..|+.....+=|...|+.++
T Consensus         9 i~v~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~-~i~~f~~~l~~gp~~a~V~~v~   76 (93)
T PRK14441          9 IVVSGRVQ-GVAFRQSAADEARRLGVEGWVRNLPDGRVEAEAEGERA-AVGALVRWCHAGPPAARVDRVE   76 (93)
T ss_pred             EEEEEecC-CccchHHHHHHHhhcCcEEEEEECCCCEEEEEEEECHH-HHHHHHHHHhhCCCCcEEEEEE
Confidence            45678777 88899999999999999999988777778999999843 5555544433233345565543

>PRK14424 acylphosphatase; Provisional

Probab=82.00  E-value=7.6  Score=29.07  Aligned_cols=57  Identities=16%  Similarity=0.128  Sum_probs=45.8

Q ss_pred             EEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC
Q 029248          118 ITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  176 (196)
Q Consensus       118 VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~  176 (196)
                      --+|+|.-. |+-.......++.+++-.|.|...++|.-+|.+||+-.. |.+|+....
T Consensus        10 ~~~v~G~VQ-GVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~-v~~f~~~l~   66 (94)
T PRK14424         10 YVRVRGVVQ-GVGFRHATVREAHALGLRGWVANLEDGTVEAMIQGPAAQ-IDRMLAWLR   66 (94)
T ss_pred             EEEEEEeec-CCchHHHHHHHHHHcCCeEEEEECCCCCEEEEEEECHHH-HHHHHHHHH
Confidence            456777777 888899999999999999999888878789999998743 666655444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	196
2ogh_A	108	Eukaryotic translation initiation factor EIF-1; al	4e-20
2if1_A	126	EIF1, SUI1; translation initiation factor; NMR {Ho	3e-19
2xzm_F	101	EIF1; ribosome, translation; 3.93A {Tetrahymena th	4e-18
1d1r_A	116	Hypothetical 11.4 KD protein YCIH in PYRF-OSMB int	5e-11

>2ogh_A Eukaryotic translation initiation factor EIF-1; alpha-beta protein; NMR {Saccharomyces cerevisiae} Length = 108

 Score = 80.3 bits (198), Expect = 4e-20
 Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 1/88 (1%)

Query: 95  GKIKKKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTE 154
           G  +      + I    RN RK +T V+G+      L    K L K FA   ++VK P  
Sbjct: 16  GDDETATSNYIHIRIQQRNGRKTLTTVQGVPE-EYDLKRILKVLKKDFACNGNIVKDPEM 74

Query: 155 KEQIDVQGDISYDIVEFITDTWPAVPET 182
            E I +QGD    + EF+        + 
Sbjct: 75  GEIIQLQGDQRAKVCEFMISQLGLQKKN 102

>2if1_A EIF1, SUI1; translation initiation factor; NMR {Homo sapiens} SCOP: d.64.1.1 Length = 126

 Score = 78.4 bits (193), Expect = 3e-19
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 1/90 (1%)

Query: 93  PGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGP 152
               +       + I    RN RK +T V+G+           K   KKFA   +V++ P
Sbjct: 32  GDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIA-DDYDKKKLVKAFKKKFACNGTVIEHP 90

Query: 153 TEKEQIDVQGDISYDIVEFITDTWPAVPET 182
              E I +QGD   +I +F+ +   A  + 
Sbjct: 91  EYGEVIQLQGDQRKNICQFLVEIGLAKDDQ 120

>2xzm_F EIF1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_F Length = 101

 Score = 74.9 bits (184), Expect = 4e-18
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 1/83 (1%)

Query: 100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 159
             +  + I    R  RKC T V+G+           K   K  +  A++V+    K+ I 
Sbjct: 14  DFQTHIHIRVEQRRGRKCFTTVEGIPP-EFDYEKIMKYWKKWLSCNATIVEEDEGKKVIK 72

Query: 160 VQGDISYDIVEFITDTWPAVPET 182
           + GD    I +F+++   A  + 
Sbjct: 73  LNGDHRNQIQQFLSEEGIAAVDN 95

>1d1r_A Hypothetical 11.4 KD protein YCIH in PYRF-OSMB intergenic region; alpha-beta plait, open-faced beta sandwich, ferredoxin-like fold; NMR {Escherichia coli} SCOP: d.64.1.1 Length = 116

 Score = 56.4 bits (136), Expect = 5e-11
 Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 6/93 (6%)

Query: 83  SSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKR-KCITIVKGLDLFGVKLSDASKKLGKK 141
           S++   +       ++ K    V I++    ++ K + ++ G+DL   +L+  + +L KK
Sbjct: 11  STETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKK 70

Query: 142 FATGASVVKGPTEKEQIDVQGDISYDIVEFITD 174
              G +V  G      I++QGD    +   +  
Sbjct: 71  CGCGGAVKDG-----VIEIQGDKRDLLKSLLEA 98

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	196
2xzm_F	101	EIF1; ribosome, translation; 3.93A {Tetrahymena th	99.93
2ogh_A	108	Eukaryotic translation initiation factor EIF-1; al	99.92
2if1_A	126	EIF1, SUI1; translation initiation factor; NMR {Ho	99.89
1d1r_A	116	Hypothetical 11.4 KD protein YCIH in PYRF-OSMB int	99.85
2d74_B	148	Translation initiation factor 2 beta subunit; prot	91.62
2fhm_A	91	Probable acylphosphatase; hydrolase; NMR {Bacillus	91.01
1nee_A	138	EIF-2-beta, probable translation initiation factor	89.79
1gxu_A	91	Hydrogenase maturation protein HYPF; phosphatase,	89.44
2e9h_A	157	EIF-5, eukaryotic translation initiation factor 5;	89.06
3trg_A	98	Acylphosphatase; fatty acid and phospholipid metab	88.97
2lxf_A	121	Uncharacterized protein; beaver fever, giardiasis,	88.1
1ulr_A	88	Putative acylphosphatase; hydrolase, structural ge	87.37
2bjd_A	101	Acylphosphatase; hyperthermophIle, hydrolase; 1.27	87.26
1w2i_A	91	Acylphosphatase; hydrolase, thermophilic, stabilit	86.37
2g2k_A	170	EIF-5, eukaryotic translation initiation factor 5;	85.81
1urr_A	102	CG18505 protein; acylphosphatase, enzyme; 1.5A {Dr	85.19
1k8b_A	52	EIF-2-beta, probable translation initiation factor	85.18
2vh7_A	99	Acylphosphatase-1; hydrolase, acetylation; 1.45A {	84.33
2gv1_A	92	Probable acylphosphatase; globular alpha-helix/bet	80.27

>2xzm_F EIF1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_F

Probab=99.93  E-value=1.8e-25  Score=169.22  Aligned_cols=85  Identities=22%  Similarity=0.293  Sum_probs=79.2

Q ss_pred             CCCcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCC
Q 029248          101 ERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVP  180 (196)
Q Consensus       101 ~~~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip  180 (196)
                      ..+.|+|++++|+|||.||+|+||+ |++||++|||.|+++||||+||.++|.++++|+|||||+++|.+||.++- -+|
T Consensus        15 ~~~~v~I~~~~R~g~K~VT~V~Gl~-~~~dlk~laK~lKkk~acggsV~~~~~~g~~I~iQGD~r~~v~~~L~~~G-~~~   92 (101)
T 2xzm_F           15 FQTHIHIRVEQRRGRKCFTTVEGIP-PEFDYEKIMKYWKKWLSCNATIVEEDEGKKVIKLNGDHRNQIQQFLSEEG-IAA   92 (101)
T ss_dssp             CSCCEEEEEEEEETTEEEEEEECCC-TTSCTHHHHHHHHHHHTSCCCEEECSTTCEEEEEESCCHHHHHHHHHHHS-SSC
T ss_pred             CCCeEEEEEEeccCCccEEEEecCC-CchhHHHHHHHHHHHhcCCeEEecCCCCceEEEEeCcHHHHHHHHHHHcC-CCC
Confidence            3678999999999999999999999 99999999999999999999999998888999999999999999999972 349


Q ss_pred             CCcEEEc
Q 029248          181 ETAIYFI  187 (196)
Q Consensus       181 ~~~I~~~  187 (196)
                      +++|++-
T Consensus        93 ~~~I~vh   99 (101)
T 2xzm_F           93 VDNITIH   99 (101)
T ss_dssp             TTTEEEC
T ss_pred             HHHEEEc
Confidence            9999874

>2ogh_A Eukaryotic translation initiation factor EIF-1; alpha-beta protein; NMR {Saccharomyces cerevisiae}

Probab=99.92  E-value=2.7e-25  Score=170.05  Aligned_cols=88  Identities=28%  Similarity=0.367  Sum_probs=82.3

Q ss_pred             cCCCCcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCC
Q 029248           99 KKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPA  178 (196)
Q Consensus        99 k~~~~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~  178 (196)
                      ++..+.|+|++++|+|||.||+|+||+. ++|+++|||.|+++||||+||.++++++++|+|||||+++|.+||.+++ .
T Consensus        20 ~~~~~~V~Ir~~~R~g~K~VT~V~Gl~~-~~dlk~lak~lKkk~acggsV~~~~~~g~~I~iQGD~r~~v~~~L~~~g-~   97 (108)
T 2ogh_A           20 TATSNYIHIRIQQRNGRKTLTTVQGVPE-EYDLKRILKVLKKDFACNGNIVKDPEMGEIIQLQGDQRAKVCEFMISQL-G   97 (108)
T ss_dssp             CCCSCSEEEEEECCSSSCCEEEEECCCT-TSCHHHHHHHHHHHHCCCEEEECCTTSSCEEEEESSCHHHHHHHHHHHH-T
T ss_pred             cCCCCeEEEEEEEccCCceEEEEeCCCc-chhHHHHHHHHHHHhcCceEEecCCCCceEEEEcCCHHHHHHHHHHHcC-C
Confidence            3668899999999999999999999997 9999999999999999999999998888999999999999999999986 7


Q ss_pred             CCCCcEEEcc
Q 029248          179 VPETAIYFIE  188 (196)
Q Consensus       179 ip~~~I~~~~  188 (196)
                      +|+++|++.+
T Consensus        98 ~~~~~I~vhg  107 (108)
T 2ogh_A           98 LQKKNIKIHG  107 (108)
T ss_dssp             SCCSCEEECC
T ss_pred             CCHHHEEEcC
Confidence            7999998753

>2if1_A EIF1, SUI1; translation initiation factor; NMR {Homo sapiens} SCOP: d.64.1.1

Probab=99.89  E-value=7.7e-24  Score=165.95  Aligned_cols=86  Identities=26%  Similarity=0.344  Sum_probs=79.4

Q ss_pred             CCCCcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCC
Q 029248          100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAV  179 (196)
Q Consensus       100 ~~~~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~i  179 (196)
                      +..+.|+|++++|+|||.||+|+||+. ++|+++|||.|+++||||+||.+.++++++|+||||++++|.+||.++- -+
T Consensus        39 g~~~~V~Ir~~~R~grK~VT~V~GL~~-~~dlk~laK~LKkk~acgGtVk~~~e~g~~I~IQGD~r~~I~~~L~~~G-~~  116 (126)
T 2if1_A           39 GTEDYIHIRIQQRNGRKTLTTVQGIAD-DYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIG-LA  116 (126)
T ss_dssp             SCTTCEECCCCCSSSSCCBCEEBSCCT-TSCHHHHHTTHHHHTCCCEEEECCTTTSSEEEESBCCHHHHHHHHHHHT-SS
T ss_pred             CCCCeEEEEEEeecCCccEEEEeCCCC-chhHHHHHHHHHHHhcCCeEEecCCCCccEEEEcCCHHHHHHHHHHHcC-CC
Confidence            668899999999999999999999998 9999999999999999999999888888999999999999999999973 34


Q ss_pred             CCCcEEEc
Q 029248          180 PETAIYFI  187 (196)
Q Consensus       180 p~~~I~~~  187 (196)
                      ++++|++-
T Consensus       117 ~~~~I~vh  124 (126)
T 2if1_A          117 KDDQLKVH  124 (126)
T ss_dssp             CTTTEECC
T ss_pred             ChhhEEee
Confidence            79999863

>1d1r_A Hypothetical 11.4 KD protein YCIH in PYRF-OSMB intergenic region; alpha-beta plait, open-faced beta sandwich, ferredoxin-like fold; NMR {Escherichia coli} SCOP: d.64.1.1

Probab=99.85  E-value=2.4e-22  Score=155.48  Aligned_cols=80  Identities=23%  Similarity=0.310  Sum_probs=72.1

Q ss_pred             CCCcEEEEEEeecCC--eeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCC
Q 029248          101 ERQEVVIEKVVRNKR--KCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPA  178 (196)
Q Consensus       101 ~~~~I~I~~~~R~~r--K~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~  178 (196)
                      ..+.|+|+++ |+||  |.||+|+||+.|++|+++|||.|+++||||+||     .+++|+||||++++|.+||.++  |
T Consensus        29 ~~~~V~I~~e-r~gR~GK~VT~V~Gl~~~~~dlk~laK~LKkk~acgGtV-----k~~~IeiQGD~r~~i~~~L~~~--G  100 (116)
T 1d1r_A           29 GDGVVRIQRQ-TSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAV-----KDGVIEIQGDKRDLLKSLLEAK--G  100 (116)
T ss_dssp             CCCEEEEEEC-CCSSSSCCCEEEECCCSCHHHHHHHHHHHTTSSSSCCBC-----CSSCEEECSCCHHHHHHHHHHH--T
T ss_pred             CCCeEEEEEE-eCCCCCCeEEEEeCCcCchhhHHHHHHHHHHHhcCCcEE-----cCCEEEEeCcHHHHHHHHHHHc--C
Confidence            3678999999 7776  999999999999999999999999999999999     4689999999999999999986  5


Q ss_pred             CCCCcEEEcc
Q 029248          179 VPETAIYFIE  188 (196)
Q Consensus       179 ip~~~I~~~~  188 (196)
                      ++.++|+.++
T Consensus       101 ~~vk~i~~~~  110 (116)
T 1d1r_A          101 MKVKLAGGLE  110 (116)
T ss_dssp             CEECCCCCCC
T ss_pred             CCcceecccc
Confidence            6777777664

>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*

Probab=91.62  E-value=0.17  Score=40.12  Aligned_cols=66  Identities=15%  Similarity=0.176  Sum_probs=50.8

Q ss_pred             CCCcEEEEEEeecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC
Q 029248          101 ERQEVVIEKVVRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  176 (196)
Q Consensus       101 ~~~~I~I~~~~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~  176 (196)
                      ..+++.+.++   |+|  |+|.+|...    .=++.-+.|.|..-+++.|++    + ++..+|+|.+.....+-++..|
T Consensus        31 kmP~~~v~~e---GkK--Tvi~Nf~dIa~~L~R~p~hv~ky~~~ELGt~g~i----d-~~rlii~G~~~~~~i~~~L~~y  100 (148)
T 2d74_B           31 EVPGALVTIE---GNK--TIIENFKDIADALNRDPQHLLKFLLREIATAGTL----E-GRRVVLQGRFTPYLIANKLKKY  100 (148)
T ss_dssp             CCCCCCEEEE---TTE--EEESCHHHHHHHHTCCSHHHHHHHHHHSCCCEEE----E-TTEEEESSCCCHHHHHHHHHHH
T ss_pred             ecCCCeEEEe---cCe--EEEEcHHHHHHHHCCCHHHHHHHHHHHhCCceee----c-CCEEEEEeeeCHHHHHHHHHHH
Confidence            4566666666   444  999998753    457888999999999999999    3 6899999999877666655544

>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A

Probab=91.01  E-value=0.78  Score=32.77  Aligned_cols=67  Identities=18%  Similarity=0.135  Sum_probs=51.3

Q ss_pred             EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      .|+|.-. |+-....+..++.+++-.|.|...++|.-+|++||+-. .|.+||.....+-|...|+-++
T Consensus         7 ~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~-~i~~f~~~l~~~~p~a~V~~v~   73 (91)
T 2fhm_A            7 IVDGRVQ-GVGFRYFVQMEADKRKLAGWVKNRDDGRVEILAEGPEN-ALQSFVEAVKNGSPFSKVTDIS   73 (91)
T ss_dssp             EEEEECC-SSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEECHH-HHHHHHHHHHTTCSSSEEEEEE
T ss_pred             EEEEeEC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHH-HHHHHHHHHHhCCCccEEEEEE
Confidence            5888877 89999999999999999999988887879999999863 3444444333355666666653

>1nee_A EIF-2-beta, probable translation initiation factor 2 beta subunit; two domain protein, mixed alpha-beta structure; NMR {Methanothermobacterthermautotrophicus} SCOP: d.241.1.1 g.59.1.1

Probab=89.79  E-value=0.15  Score=39.98  Aligned_cols=66  Identities=11%  Similarity=0.097  Sum_probs=50.6

Q ss_pred             CCCcEEEEEEeecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC
Q 029248          101 ERQEVVIEKVVRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  176 (196)
Q Consensus       101 ~~~~I~I~~~~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~  176 (196)
                      ..+++.+.++   |+|  |+|.+|...    .=++.-+.|.|..-+++.+++    + ++..+|+|.+.....+-++..|
T Consensus        29 ~mp~~~v~~e---G~k--Tvi~Nf~dIa~~L~R~p~hv~ky~~~ELGt~g~i----d-~~rlii~G~~~~~~i~~~L~~y   98 (138)
T 1nee_A           29 EVPKAYSVIQ---GNR--TFIQNFREVADALNRDPQHLLKFLLRELGTAGNL----E-GGRAILQGKFTHFLINERIEDY   98 (138)
T ss_dssp             CCSCCCCCEE---TTE--EEESCHHHHHHHHCSSHHHHHHHHHHHCCSCCCC----B-TTTEEEESSCSSSHHHHHHHHH
T ss_pred             ecCCCeEEEE---CCc--EEEEcHHHHHHHHCCCHHHHHHHHHHHhCCceee----c-CCEEEEEeeeCHHHHHHHHHHH
Confidence            3555555555   666  999998853    458999999999999999999    3 7799999999766665555444

>1gxu_A Hydrogenase maturation protein HYPF; phosphatase, acylphosphatases, hydrogenase maturations, fibril formation, zinc-finger, complete proteome; 1.27A {Escherichia coli} SCOP: d.58.10.1 PDB: 1gxt_A

Probab=89.44  E-value=2  Score=30.75  Aligned_cols=63  Identities=13%  Similarity=0.121  Sum_probs=51.1

Q ss_pred             EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      .|+|.-. |+-.......++.+++-.|.|...+++ -+|++||+- +.+.++|....  =|...|+-+
T Consensus        12 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~VrN~~dG-Vei~~eG~~-~~f~~~l~~~~--P~~A~V~~v   74 (91)
T 1gxu_A           12 RIRGKVQ-GVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDP-EVFLVQLYQHC--PPLARIDSV   74 (91)
T ss_dssp             EEEEECS-SSSHHHHHHHHHHHHTCCEEEEECSSS-EEEEESSCC-HHHHHHHHHTC--CTTCEEEEE
T ss_pred             EEEEeeC-CcCHHHHHHHHHHHcCCeEEEEECCCc-EEEEEEECH-HHHHHHHhhCC--CCCEEEEEE
Confidence            5888877 899999999999999999999887777 899999999 88888886632  234555544

>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.06  E-value=0.22  Score=39.86  Aligned_cols=71  Identities=8%  Similarity=0.093  Sum_probs=53.1

Q ss_pred             CCcEEEEEEeecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC
Q 029248          102 RQEVVIEKVVRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  176 (196)
Q Consensus       102 ~~~I~I~~~~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~  176 (196)
                      .+++.+.++-++.++ -|+|.+|...    .=++.-+.|.|..-+++.+++.   .+.+..+|+|.+.....+-++..|
T Consensus        25 mP~~~v~~eG~gnG~-KTvi~Nf~dIak~L~R~p~hv~ky~~~ELGt~g~id---~~~~rlii~G~~~~~~i~~~L~~y   99 (157)
T 2e9h_A           25 MPRLIAKVEGKGNGI-KTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFD---VKNDRYIVNGSHEANKLQDMLDGF   99 (157)
T ss_dssp             EECCCEEECSSSSSC-EEEETTHHHHHHHTTSCTHHHHHHHHHHHTCCEEEE---TTTTEEEEEBCCCHHHHHHHHHHH
T ss_pred             cCCCeEEEeccCCcc-EEEEEcHHHHHHHHCCCHHHHHHHHHHHhCCceeec---CCCCEEEEEeeeCHHHHHHHHHHH
Confidence            556677777774332 5888888753    4578899999999999999992   157899999999877666555444

>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}

Probab=88.97  E-value=1.8  Score=31.48  Aligned_cols=66  Identities=17%  Similarity=0.220  Sum_probs=50.4

Q ss_pred             EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      .|+|.-. |+-.......++.+++-.|.|-..+++.-+|++||+ .+.|..|+.....+=|...|+-+
T Consensus        17 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~-~~~l~~f~~~l~~gPp~A~V~~v   82 (98)
T 3trg_A           17 TVSGKVQ-GVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGE-RDSIMILTEWLWEGPPQAAVSNV   82 (98)
T ss_dssp             EEEEECS-SSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEE-HHHHHHHHHHTTTCSTTCEEEEE
T ss_pred             EEEEeEC-CCCccHHHHHHHHHcCCeEEEEECCCCEEEEEEEEC-HHHHHHHHHHHHhCCCCcEEEEE
Confidence            5788877 899999999999999999999887777789999998 45566666554433344555544

>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}

Probab=88.10  E-value=0.94  Score=34.52  Aligned_cols=66  Identities=18%  Similarity=0.160  Sum_probs=49.1

Q ss_pred             EEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          121 VKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       121 V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      |+|.-. |+-....+..++.+++-.|.|...++|.-+|++||+- +.|.+||.....+=|...|+-++
T Consensus        40 V~G~VQ-GVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~-~~v~~f~~~l~~gPp~A~V~~v~  105 (121)
T 2lxf_A           40 VTGKVQ-GVFFRKYTKKEADALSLVGYVTNNEDGSVSGVVQGPK-EQVDAFVKYLHKGSPKSVVKKVS  105 (121)
T ss_dssp             EEECTT-CCCCHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEH-HHHHHHHHHHHHCCTTCCEEEEE
T ss_pred             EEEeeC-CcCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECH-HHHHHHHHHHHhCCCCCEEEEEE
Confidence            778777 8888999999999999999998888888899999973 44444443332354555665543

>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1

Probab=87.37  E-value=3.3  Score=29.24  Aligned_cols=64  Identities=13%  Similarity=0.129  Sum_probs=49.4

Q ss_pred             EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCch--HHHHHHHhhhCCCCCCCcEEEc
Q 029248          120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIS--YDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~--~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      .|+|.-. |+-....+..++.+++-.|.|...++|.-+|.+||+-.  +...++|. .  +=|...|+-+
T Consensus         7 ~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~-~--gP~~a~V~~v   72 (88)
T 1ulr_A            7 LVKGRVQ-GVGYRAFAQKKALELGLSGYAENLPDGRVEVVAEGPKEALELFLHHLK-Q--GPRLARVEAV   72 (88)
T ss_dssp             EEEEECS-SSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEESCHHHHHHHHHHHH-H--CSTTCEEEEE
T ss_pred             EEEEeEC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHH-h--CCCCcEEEEE
Confidence            5888877 89999999999999999999988877879999999863  45555554 2  3244555544

>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A

Probab=87.26  E-value=2.4  Score=30.97  Aligned_cols=66  Identities=12%  Similarity=0.131  Sum_probs=50.3

Q ss_pred             EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      .|+|.-. |+-....+..++.+++-.|.|...++|.-+|++||+-. .|.+||.....+=|...|+-+
T Consensus        19 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~-~i~~f~~~l~~gP~~A~V~~v   84 (101)
T 2bjd_A           19 RVYGLVQ-GVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEE-ALSKLLERIKQGPPAAEVEKV   84 (101)
T ss_dssp             EEEEECS-SSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHH-HHHHHHHHHTTCSTTCEEEEE
T ss_pred             EEEEeEC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHH-HHHHHHHHHHhCCCccEEEEE
Confidence            5889887 99999999999999999999988887878999999863 355555444446234555544

>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A

Probab=86.37  E-value=2.8  Score=29.89  Aligned_cols=66  Identities=15%  Similarity=0.145  Sum_probs=49.7

Q ss_pred             EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      .|+|.-. |+-....+..++.+++-.|.|...+++.-+|++||+-.. |.+|+.....+=|...|+-+
T Consensus         9 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~-v~~f~~~l~~gP~~a~V~~v   74 (91)
T 1w2i_A            9 KIYGRVQ-GVGFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEER-VEALIGWAHQGPPLARVTRV   74 (91)
T ss_dssp             EEEEECS-SSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHH-HHHHHHHTTTCSTTCEEEEE
T ss_pred             EEEEEEC-CcCHHHHHHHHHHHcCCeEEEEECCCCCEEEEEEeCHHH-HHHHHHHHHhCCCCcEEEEE
Confidence            5888877 899999999999999999999888888799999998643 55555443323344555544

>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}

Probab=85.81  E-value=0.27  Score=39.84  Aligned_cols=71  Identities=8%  Similarity=0.098  Sum_probs=52.0

Q ss_pred             CCCcEEEEEEeecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCC-CceEEEcCCchHHHHHHHhhh
Q 029248          101 ERQEVVIEKVVRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTE-KEQIDVQGDISYDIVEFITDT  175 (196)
Q Consensus       101 ~~~~I~I~~~~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~-~~eI~IQGD~~~~v~~~L~~~  175 (196)
                      ..+.+.+.++-++.++ -|+|.+|...    .=++.-+.+.|..-+++.+++    ++ .+..+|+|.+....++-++..
T Consensus        17 kmP~~~v~~EG~gnG~-KTvi~Nf~dIak~L~R~p~hv~kyf~~ELGt~g~i----d~~~~rliinG~~~~~~i~~~L~~   91 (170)
T 2g2k_A           17 KMPRLIAKVEGKGNGI-KTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQF----DVKNDRYIVNGSHEANKLQDMLDG   91 (170)
T ss_dssp             CCCCCCCEEESCTTTC-EEECSSHHHHHHHHSSCCTTTHHHHHHHTTCCCEE----CTTTCCEEEEBCCCHHHHHHHHHH
T ss_pred             cCCCCeEEEeccCCcc-EEEEEcHHHHHHHhCCCHHHHHHHHHHHhCCceee----cCCCCEEEEEeeeCHHHHHHHHHH
Confidence            4677788888884332 4777777642    345666778899999999999    43 789999999988777666554


Q ss_pred             C
Q 029248          176 W  176 (196)
Q Consensus       176 ~  176 (196)
                      |
T Consensus        92 y   92 (170)
T 2g2k_A           92 F   92 (170)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1

Probab=85.19  E-value=2.9  Score=30.38  Aligned_cols=65  Identities=8%  Similarity=0.160  Sum_probs=49.4

Q ss_pred             EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCch--HHHHHHHhhhCCCCCCCcEEEc
Q 029248          120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIS--YDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~--~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      .|+|.-. |+-....+..++.+++-.|.|...++|.-+|++||+-.  +...++|..+  +=|...|+-+
T Consensus        16 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l~~~--gP~~a~V~~v   82 (102)
T 1urr_A           16 EIFGRVQ-GVFFRKHTSHEAKRLGVRGWCMNTRDGTVKGQLEAPMMNLMEMKHWLENN--RIPNAKVSKA   82 (102)
T ss_dssp             EEEEECS-SSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHHC--CSTTCEEEEE
T ss_pred             EEEEeEC-CcChhHHHHHHHHHhCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhc--CCCccEEEEE
Confidence            5888887 89999999999999999999988877778999999863  4445555432  3344555554

>1k8b_A EIF-2-beta, probable translation initiation factor 2 beta subunit; N-terminal domain, AIF2 subunit beta; NMR {Methanocaldococcus jannaschii} SCOP: d.241.1.1

Probab=85.18  E-value=0.64  Score=30.51  Aligned_cols=46  Identities=13%  Similarity=0.123  Sum_probs=37.2

Q ss_pred             eecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCC
Q 029248          111 VRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGD  163 (196)
Q Consensus       111 ~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD  163 (196)
                      .|-|+|  |+|.+|...    .=++.-+.|.|.+-+++.+++    + ++..+|+|.
T Consensus         3 ~~eG~k--Tvi~Nf~~Ia~~L~R~p~hv~ky~~~ELGt~g~i----d-~~rlii~G~   52 (52)
T 1k8b_A            3 LIEGNR--TIIRNFRELAKAVNRDEEFFAKYLLKETGSAGNL----E-GGRLILQRR   52 (52)
T ss_dssp             EEETTE--EEECCHHHHHHHHHTCHHHHHHHHHHHHSSEEEE----E-TTEEEEECC
T ss_pred             EEEcCe--EEEECHHHHHHHHCCCHHHHHHHHHHHhCCCeee----c-CCEEEEeCC
Confidence            355777  999998753    357899999999999999999    3 678888883

>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A

Probab=84.33  E-value=4.1  Score=29.37  Aligned_cols=65  Identities=22%  Similarity=0.203  Sum_probs=49.2

Q ss_pred             EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCc--hHHHHHHHhhhCCCCCCCcEEEc
Q 029248          120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI--SYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~--~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      .|+|.-. |+-....+..++.+++-.|.|...++|.-+|++||+-  .+.+.++|...  +=|...|+-+
T Consensus        13 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~v~~f~~~l~~~--~p~~a~V~~v   79 (99)
T 2vh7_A           13 EIFGKVQ-GVFFRKHTQAEGKKLGLVGWVQNTDRGTVQGQLQGPISKVRHMQEWLETR--GSPKSHIDKA   79 (99)
T ss_dssp             EEEEECS-SSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHHHT--CSTTCEEEEE
T ss_pred             EEEEeeC-CcChHHHHHHHHHHcCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhc--CCCceEEEEE
Confidence            5888887 8999999999999999999998887777899999986  34444555432  3244555554

>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}

Probab=80.27  E-value=2.8  Score=29.84  Aligned_cols=66  Identities=9%  Similarity=0.022  Sum_probs=46.5

Q ss_pred             EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhh-CCCCCCCcEEEc
Q 029248          120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDT-WPAVPETAIYFI  187 (196)
Q Consensus       120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~-~~~ip~~~I~~~  187 (196)
                      .|+|.-. |+-....+..++.+++-.|.|...++|.-+|++||+-. .|.+|+... ..+=|...|+-+
T Consensus         9 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~-~i~~f~~~l~~~gP~~a~V~~v   75 (92)
T 2gv1_A            9 WVYGRVQ-GVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEG-QVEKLMQWLKSGGPRSARVERV   75 (92)
T ss_dssp             EEEEECT-TTTCCSHHHHHHHHHTCCCEEEECSSSCEEEEECSCHH-HHHHHHHHHHHTSSTTSEEEEE
T ss_pred             EEEEeeC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHH-HHHHHHHHhhccCCCceEEEEE
Confidence            5788776 77778888888999999999988777778999999863 244444333 335234445443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	196
d2if1a_	126	d.64.1.1 (A:) Eukaryotic translation initiation fa	1e-14
d1d1ra_	83	d.64.1.1 (A:) YciH {Escherichia coli [TaxId: 562]}	6e-10

>d2if1a_ d.64.1.1 (A:) Eukaryotic translation initiation factor eIF-1 (SUI1) {Human (Homo sapiens) [TaxId: 9606]} Length = 126

class: Alpha and beta proteins (a+b)
fold: eIF1-like
superfamily: eIF1-like
family: eIF1-like
domain: Eukaryotic translation initiation factor eIF-1 (SUI1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (158), Expect = 1e-14
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)

Query: 96  KIKKKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEK 155
            +       + I    RN RK +T V+G+           K   KKFA   +V++ P   
Sbjct: 35  LLPAGTEDYIHIRIQQRNGRKTLTTVQGIA-DDYDKKKLVKAFKKKFACNGTVIEHPEYG 93

Query: 156 EQIDVQGDISYDIVEFITD 174
           E I +QGD   +I +F+ +
Sbjct: 94  EVIQLQGDQRKNICQFLVE 112

>d1d1ra_ d.64.1.1 (A:) YciH {Escherichia coli [TaxId: 562]} Length = 83

class: Alpha and beta proteins (a+b)
fold: eIF1-like
superfamily: eIF1-like
family: eIF1-like
domain: YciH
species: Escherichia coli [TaxId: 562]

 Score = 51.5 bits (124), Expect = 6e-10
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 5/61 (8%)

Query: 114 KRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFIT 173
           K K + ++ G+DL   +L+  + +L KK   G +V  G      I++QGD    +   + 
Sbjct: 16  KGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDG-----VIEIQGDKRDLLKSLLE 70

Query: 174 D 174
            
Sbjct: 71  A 71

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	196
d2if1a_	126	Eukaryotic translation initiation factor eIF-1 (SU	99.9
d1d1ra_	83	YciH {Escherichia coli [TaxId: 562]}	99.8
d1w2ia_	90	Acylphosphatase {Pyrococcus horikoshii [TaxId: 539	93.27
d1neea1	98	Translation initiation factor 2 beta, aIF2beta, N-	93.03
d1ulra_	87	Acylphosphatase {Thermus thermophilus [TaxId: 274]	92.73
d1apsa_	98	Acylphosphatase {Horse (Equus caballus) [TaxId: 97	84.51
d2acya_	98	Acylphosphatase {Cow (Bos taurus) [TaxId: 9913]}	83.27
d1urra_	97	Acylphosphatase 2 (Cg18505) {Fruit fly (Drosophila	81.05

>d2if1a_ d.64.1.1 (A:) Eukaryotic translation initiation factor eIF-1 (SUI1) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: eIF1-like
superfamily: eIF1-like
family: eIF1-like
domain: Eukaryotic translation initiation factor eIF-1 (SUI1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.2e-24  Score=168.74  Aligned_cols=88  Identities=25%  Similarity=0.349  Sum_probs=81.5

Q ss_pred             CccCCCCcEEEEEEeecCCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC
Q 029248           97 IKKKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  176 (196)
Q Consensus        97 ~kk~~~~~I~I~~~~R~~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~  176 (196)
                      ...+....|+|++++|+|||+||+|+||+ |++||++|||.|+++|||||||.+.++++++|+||||++++|.+||.+++
T Consensus        36 ~~~~~~~~I~I~~ekR~G~K~VT~I~Gl~-~~~dlk~laK~lKk~~acggSVk~~~~~~~~I~IQGD~r~~v~~~L~~~g  114 (126)
T d2if1a_          36 LPAGTEDYIHIRIQQRNGRKTLTTVQGIA-DDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIG  114 (126)
T ss_dssp             CSCSCTTCEECCCCCSSSSCCBCEEBSCC-TTSCHHHHHTTHHHHTCCCEEEECCTTTSSEEEESBCCHHHHHHHHHHHT
T ss_pred             CCCCCcceEEEEEEecCCCCCeEEEECCC-CcccHHHHHHHHHHhcCCCceEEeCCCCCcEEEEcccHHHHHHHHHHHcC
Confidence            33567889999999999999999999998 79999999999999999999999988888999999999999999999987


Q ss_pred             CCCCCCcEEE
Q 029248          177 PAVPETAIYF  186 (196)
Q Consensus       177 ~~ip~~~I~~  186 (196)
                       .+++++|++
T Consensus       115 -~~~k~~I~v  123 (126)
T d2if1a_         115 -LAKDDQLKV  123 (126)
T ss_dssp             -SSCTTTEEC
T ss_pred             -CCccccEEe
Confidence             778999875

>d1d1ra_ d.64.1.1 (A:) YciH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: eIF1-like
superfamily: eIF1-like
family: eIF1-like
domain: YciH
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=1.2e-20  Score=136.36  Aligned_cols=70  Identities=24%  Similarity=0.369  Sum_probs=63.7

Q ss_pred             CCCcEEEEEEeec-CCeeEEEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhh
Q 029248          101 ERQEVVIEKVVRN-KRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDT  175 (196)
Q Consensus       101 ~~~~I~I~~~~R~-~rK~VT~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~  175 (196)
                      ....|+|++++|+ ++|+||+|+||+.|++||++||+.|+++||||+||     .+++|+|||||++.|.+||.++
T Consensus         2 g~~~Vri~~e~kgR~GK~VT~I~Gl~~~~~dlk~l~k~lKk~~gcGgsv-----k~~~I~lQGd~~~~v~~~L~~~   72 (83)
T d1d1ra_           2 GDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAV-----KDGVIEIQGDKRDLLKSLLEAK   72 (83)
T ss_dssp             CCCEEEEEECCCSSSSCCCEEEECCCSCHHHHHHHHHHHTTSSSSCCBC-----CSSCEEECSCCHHHHHHHHHHH
T ss_pred             CCeEEEEEEEcCCCCCCeEEEEECCcCCHHHHHHHHHHHHHHhcCCEEE-----ECCEEEEeCcHHHHHHHHHHHc
Confidence            3567899988764 34999999999999999999999999999999999     5689999999999999999986

>d1w2ia_ d.58.10.1 (A:) Acylphosphatase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Acylphosphatase/BLUF domain-like
family: Acylphosphatase-like
domain: Acylphosphatase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.27  E-value=0.16  Score=34.78  Aligned_cols=66  Identities=15%  Similarity=0.153  Sum_probs=52.1

Q ss_pred             EEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEc
Q 029248          120 IVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFI  187 (196)
Q Consensus       120 ~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~  187 (196)
                      .|+|.-. |+-....+...+.+++-.|.|...+++.-+|.+||+ .+.|.+|+...+.+=|...|+-+
T Consensus         8 ~V~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~qG~-~~~i~~f~~~l~~gp~~a~V~~i   73 (90)
T d1w2ia_           8 KIYGRVQ-GVGFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGD-EERVEALIGWAHQGPPLARVTRV   73 (90)
T ss_dssp             EEEEECS-SSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEE-HHHHHHHHHHTTTCSTTCEEEEE
T ss_pred             EEEEeEe-CcCChHHHHHHHHHcCCeEEEEECCCCCEEEEEECC-HHHHHHHHHHHHhCcCCcEEEEE
Confidence            4677666 899999999999999999999888888899999998 67788787555544344555544

>d1neea1 d.241.1.1 (A:1-98) Translation initiation factor 2 beta, aIF2beta, N-terminal domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a+b)
fold: Ribosome binding domain-like
superfamily: Translation initiation factor 2 beta, aIF2beta, N-terminal domain
family: Translation initiation factor 2 beta, aIF2beta, N-terminal domain
domain: Translation initiation factor 2 beta, aIF2beta, N-terminal domain
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.03  E-value=0.021  Score=40.49  Aligned_cols=65  Identities=11%  Similarity=0.099  Sum_probs=49.8

Q ss_pred             CCcEEEEEEeecCCeeEEEEEccCCC----CCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC
Q 029248          102 RQEVVIEKVVRNKRKCITIVKGLDLF----GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW  176 (196)
Q Consensus       102 ~~~I~I~~~~R~~rK~VT~V~GLe~f----~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~  176 (196)
                      .|+..+.++   |+|  |++.++...    .-+..-+.|.|.+-+||.||+     .++..+|+|-+.....+-++.+|
T Consensus        27 mP~~~v~~e---Gkk--Tii~Nf~~Ia~~L~R~p~hl~kfl~~ELgt~g~i-----~~~~lii~G~~~~~~i~~~l~~y   95 (98)
T d1neea1          27 VPKAYSVIQ---GNR--TFIQNFREVADALNRDPQHLLKFLLRELGTAGNL-----EGGRAILQGKFTHFLINERIEDY   95 (98)
T ss_dssp             CSCCCCCEE---TTE--EEESCHHHHHHHHCSSHHHHHHHHHHHCCSCCCC-----BTTTEEEESSCSSSHHHHHHHHH
T ss_pred             cCCceEEEe---cce--EEEechHHHHHHHCCCHHHHHHHHHHHhCCceEE-----eCCEEEEEeeeCHHHHHHHHHHH
Confidence            344444444   655  888898864    568999999999999999999     24679999999887777666654

>d1ulra_ d.58.10.1 (A:) Acylphosphatase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Acylphosphatase/BLUF domain-like
family: Acylphosphatase-like
domain: Acylphosphatase
species: Thermus thermophilus [TaxId: 274]

Probab=92.73  E-value=0.18  Score=34.30  Aligned_cols=68  Identities=15%  Similarity=0.144  Sum_probs=53.6

Q ss_pred             EEEEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCCCCcEEEcc
Q 029248          119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVPETAIYFIE  188 (196)
Q Consensus       119 T~V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip~~~I~~~~  188 (196)
                      -+|+|.-. |+-.....+..+.+++=.|.|...+++.-+|.+||+- +.|.+|+...+.+=|...|+.++
T Consensus         5 ~iV~G~VQ-GVGFR~~~~~~A~~~~l~G~V~N~~dG~Vei~~~G~~-~~v~~f~~~l~~gp~~a~V~~v~   72 (87)
T d1ulra_           5 ALVKGRVQ-GVGYRAFAQKKALELGLSGYAENLPDGRVEVVAEGPK-EALELFLHHLKQGPRLARVEAVE   72 (87)
T ss_dssp             EEEEEECS-SSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEESCH-HHHHHHHHHHHHCSTTCEEEEEE
T ss_pred             EEEEEEEe-CccCHHHHHHHHHHcCCeEEEEECCCCCEEEEEEECH-HHHHHHHHHHhhCCCCcEEEEEE
Confidence            46788777 8999999999999999999998888898999999984 66666665544454556676654

>d1apsa_ d.58.10.1 (A:) Acylphosphatase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Acylphosphatase/BLUF domain-like
family: Acylphosphatase-like
domain: Acylphosphatase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=84.51  E-value=0.43  Score=32.67  Aligned_cols=55  Identities=16%  Similarity=0.021  Sum_probs=45.8

Q ss_pred             EEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCC
Q 029248          121 VKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWP  177 (196)
Q Consensus       121 V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~  177 (196)
                      |+|.-. |+-....+...+..++-.|.|...++|.-+|++||+ .+.|.+||...+.
T Consensus        13 V~G~VQ-GVGFR~~~~~~A~~~~l~G~V~N~~dG~Vei~~qG~-~~~i~~f~~~l~~   67 (98)
T d1apsa_          13 VFGRVQ-GVCFRMYAEDEARKIGVVGWVKNTSKGTVTGQVQGP-EEKVNSMKSWLSK   67 (98)
T ss_dssp             EECTTS-CCCCTTHHHHHHHHHTCEEEEECCTTCEEEEEEEEE-HHHHHHHHHSSSS
T ss_pred             EEEeEc-CcCcHHHHHHHHHHcCCeEEEEECCCCCEEEEEEcC-HHHHHHHHHHHHh
Confidence            677776 788888999999999999999887888899999997 5778888766553

>d2acya_ d.58.10.1 (A:) Acylphosphatase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Acylphosphatase/BLUF domain-like
family: Acylphosphatase-like
domain: Acylphosphatase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=83.27  E-value=1.9  Score=29.34  Aligned_cols=65  Identities=18%  Similarity=0.094  Sum_probs=50.3

Q ss_pred             EEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhC-CCCCCCcEEEc
Q 029248          121 VKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PAVPETAIYFI  187 (196)
Q Consensus       121 V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~-~~ip~~~I~~~  187 (196)
                      |+|--. |+-....++..+.+++=.|.|...+++.-+|.+||+ ...|.+||.... .+=|...|+-+
T Consensus        13 V~G~VQ-GVGFR~~v~~~A~~l~L~G~V~N~~dG~Vei~~qG~-~~~i~~f~~~l~~~gp~~a~V~~i   78 (98)
T d2acya_          13 IFGKVQ-GVFFRKYTQAEGKKLGLVGWVQNTDQGTVQGQLQGP-ASKVRHMQEWLETKGSPKSHIDRA   78 (98)
T ss_dssp             EEEECS-SSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEE-HHHHHHHHHHHHHTCSTTCEEEEE
T ss_pred             EEEEEc-CcCchHHHHHHHHHcCCEEEEEECCCCeEEEEEEEC-HHHHHHHHHHHHhcCCCCcEEEEE
Confidence            677776 889999999999999999999888888899999998 666667765442 24445556543

>d1urra_ d.58.10.1 (A:) Acylphosphatase 2 (Cg18505) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Acylphosphatase/BLUF domain-like
family: Acylphosphatase-like
domain: Acylphosphatase 2 (Cg18505)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.05  E-value=3.1  Score=27.99  Aligned_cols=65  Identities=8%  Similarity=0.020  Sum_probs=47.9

Q ss_pred             EEccCCCCCCHHHHHHHHhhhcccceeeeeCCCCCceEEEcCCchHHHHHHHhhhCCCCC-CCcEEEc
Q 029248          121 VKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVP-ETAIYFI  187 (196)
Q Consensus       121 V~GLe~f~idlk~laK~lkkkfacg~SV~k~~~~~~eI~IQGD~~~~v~~~L~~~~~~ip-~~~I~~~  187 (196)
                      |.|.-. |+-....++..+.+++..|.|...++|.-+|.+||+-. +|.+||.....+-| ...|+-+
T Consensus        12 V~G~VQ-GVGFR~~~~~~A~~l~l~G~V~N~~dG~Vei~~qG~~~-~i~~f~~~l~~~~p~~a~V~~i   77 (97)
T d1urra_          12 IFGRVQ-GVFFRKHTSHEAKRLGVRGWCMNTRDGTVKGQLEAPMM-NLMEMKHWLENNRIPNAKVSKA   77 (97)
T ss_dssp             EEEECS-SSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEECHH-HHHHHHHHHHHCCSTTCEEEEE
T ss_pred             EEEEec-CcCChHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHH-HHHHHHHHHhhCCCCCcEEEEE
Confidence            788877 89999999999999999999988888889999999754 44444433221223 4445443