Citrus Sinensis ID: 029305

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-----
Protein Sequence
MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLHFAS
Secondary Structure (PSIPRED)
ccccccccccccEEcEEEEEcccHHHHHHHHHHHcccccccccccccccccEEEcccccEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHcccEEEEEEEccccccEEEEEEEcccccEEEEEcccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHcHHEEEEccHHHHHHHHHHHccccccccccccccccEEEEEccccEEEEEEcccccccccccccccccccEEEEEEccHHHHHHHHHHccccEEEcEcccccccEEEEEEEcccccEEEEEccccccEEEccccccccccccccccHHHccccccccccccccccccccEEccHHHHHccc
Coil and Loop (DISEMBL)
mkesvenplclkslnHISLVCRSVEASLDFYQNVLgffpirrpgsfdfdgacRLFNYgmgihllkseepdnlpkagkninpkdnhisfqcENMAIVERRLKEMKIDYVKSRveegginvdqlffhdpdgsmieicncdvlpvvplagdavrirsctstvncnfhqqqiqqepqinpqsclsdsihakedflhfas
Flexible Loop (DISEMBL)
MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKninpkdnhisfQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLHFAS
Low Complexity Region (SEG)
MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHqqqiqqepqinpqSCLSDSIHAKEDFLHFAS
Disordered region (IsUnstruct)
********LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLK*******************HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQ*****************************
Disordered Region (DISOPRED)
***********KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEP*********INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAV***********************************A***FLHFA*
Disordered Region (DISEMBL)
********LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLHFAS
Disordered Region (DISPRO)
******NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCN**********************H*K*DFLHFAS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLHFAS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	195	2.2.26 [Sep-21-2011]
Q28CR0	160	Glyoxalase domain-contain	yes	no	0.589	0.718	0.251	9e-07
Q502D1	163	Glyoxalase domain-contain	yes	no	0.589	0.705	0.237	3e-05
O31817	144	Metallothiol transferase	yes	no	0.574	0.777	0.282	0.0003
Q65KJ5	154	Metallothiol transferase	yes	no	0.620	0.785	0.255	0.0005

>sp|Q28CR0|GLOD5_XENTR Glyoxalase domain-containing protein 5 OS=Xenopus tropicalis GN=glod5 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 24/139 (17%)

Query: 8   PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSE 67
           P C++ L+H+ L  RS++ +++FY  VLG        +  F G  +  ++GM        
Sbjct: 28  PFCIQRLDHLVLTVRSLDRTINFYTKVLGM------EATTFKGGRKALSFGM-------- 73

Query: 68  EPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKS---RVEEGGIN------ 118
           +  NL +AGK   PK +  S    ++ ++        + ++K+    VEEG ++      
Sbjct: 74  QKINLHEAGKEFEPKASVPSPGSADLCLITETPLSTVVQHLKACGVPVEEGPVSRTGAVG 133

Query: 119 -VDQLFFHDPDGSMIEICN 136
            +  ++  DPD ++IE+ N
Sbjct: 134 EIISVYMRDPDQNLIEVSN 152

Xenopus tropicalis (taxid: 8364)

>sp|Q502D1|GLOD5_DANRE Glyoxalase domain-containing protein 5 OS=Danio rerio GN=glod5 PE=2 SV=1

 Score = 48.5 bits (114), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 24/139 (17%)

Query: 8   PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSE 67
           P+ +  L+H+ L  R +  +  FY  VLG   +       F G  +  ++G        E
Sbjct: 36  PVLISHLDHLVLTVRDLNKTTKFYSEVLGMEVV------TFKGDRKALSFG--------E 81

Query: 68  EPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKS---RVEEGGIN------ 118
           +  NL + GK   PK    +    ++ ++ +   +   D++K+    +EEG ++      
Sbjct: 82  QKINLHQVGKEFEPKAQTPTPGSADLCLITKTPLKAVADHLKACGVTIEEGPVDRTGAVG 141

Query: 119 -VDQLFFHDPDGSMIEICN 136
            +  L+F DPD ++IE+ N
Sbjct: 142 PISSLYFRDPDDNLIEVSN 160

Danio rerio (taxid: 7955)

>sp|O31817|FOSB_BACSU Metallothiol transferase FosB OS=Bacillus subtilis (strain 168) GN=fosB PE=1 SV=1

 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 19/131 (14%)

Query: 9   LCLKSLNHISLVCRSVEASLDFYQNVLG---FFPIRRPGSFDFDGACRLFNYGMGIHLLK 65
           + +K +NH+      ++ S+DFYQ V G       R    FD +          GI L  
Sbjct: 1   MEIKGINHLLFSVSHLDTSIDFYQKVFGAKLLVKGRTTAYFDMN----------GIWLAL 50

Query: 66  SEEPDNLPKAGKNINPKDNHISFQCENMAIVE--RRLKEMKIDYVKSRVEEGGINVDQLF 123
           +EEPD +P+   +I     HI+F  E+    E   +LK + ++ +  R E    +   ++
Sbjct: 51  NEEPD-IPR--NDIKLSYTHIAFTIEDHEFEEMSAKLKRLHVNILPGR-ERDERDRKSIY 106

Query: 124 FHDPDGSMIEI 134
           F DPDG   E 
Sbjct: 107 FTDPDGHKFEF 117

Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|Q65KJ5|FOSB_BACLD Metallothiol transferase FosB OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=fosB PE=3 SV=1

 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 20/141 (14%)

Query: 5   VENPLCLKSLNHISLVCRSVEASLDFYQNVL---GFFPIRRPGSFDFDGACRLFNYGMGI 61
           +EN   L  +NH+      +  S+ FY+ V          +   FD +G    FN     
Sbjct: 1   MENNKIL-GINHLLFSVSDLSVSISFYEKVFDAKWLVKAEKTAYFDLNGIWLAFN----- 54

Query: 62  HLLKSEEPDNLPKAGKNINPKDNHISF--QCENMAIVERRLKEMKIDYVKSRVEEGGINV 119
                EE D      + I+    HI+F  Q E++   E++L ++ ++ +K R    G + 
Sbjct: 55  -----EEKD---IKRQEIHDSYTHIAFSIQQEDLPFWEKKLHDLGVNVLKGRKRHEG-DR 105

Query: 120 DQLFFHDPDGSMIEICNCDVL 140
           D ++F DPDG   E+    V 
Sbjct: 106 DSIYFSDPDGHKFELHTGSVF 126

Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor.

Bacillus licheniformis (strain DSM 13 / ATCC 14580) (taxid: 279010)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	195
225445448	195	PREDICTED: metallothiol transferase fosB	0.820	0.820	0.759	1e-63
255566967	193	lactoylglutathione lyase, putative [Rici	0.820	0.829	0.736	1e-62
255636198	172	unknown [Glycine max]	0.841	0.953	0.715	1e-61
194466169	181	lactoylglutathione lyase [Arachis hypoga	0.917	0.988	0.657	3e-61
255553127	172	lactoylglutathione lyase, putative [Rici	0.861	0.976	0.697	5e-61
351723359	172	uncharacterized protein LOC100306100 [Gl	0.779	0.883	0.730	3e-60
449436156	169	PREDICTED: uncharacterized protein LOC10	0.779	0.899	0.737	1e-59
388506784	172	unknown [Lotus japonicus] gi|388522799|g	0.779	0.883	0.724	4e-59
317106739	172	JHL06P13.16 [Jatropha curcas]	0.779	0.883	0.717	1e-58
351721390	173	uncharacterized protein LOC100305695 [Gl	0.835	0.942	0.680	2e-58

>gi|225445448|ref|XP_002285087.1| PREDICTED: metallothiol transferase fosB [Vitis vinifera] gi|147821406|emb|CAN63501.1| hypothetical protein VITISV_011676 [Vitis vinifera] gi|297738928|emb|CBI28173.3| unnamed protein product [Vitis vinifera]

 Score =  247 bits (631), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 123/162 (75%), Positives = 137/162 (84%), Gaps = 2/162 (1%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG 60
           M+   ENPL LKS+NHISLVCRSVE SLDFYQ VLGFF IRRPGSFDFDGA  L+NYGMG
Sbjct: 1   MEGRAENPLRLKSVNHISLVCRSVEKSLDFYQKVLGFFSIRRPGSFDFDGA-WLYNYGMG 59

Query: 61  IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 120
           IHLL+SE+PDN+PK  + INPKDNHISFQCE+MA VE++LKEMKI+YV+SRVEEGGI VD
Sbjct: 60  IHLLQSEDPDNMPKISQQINPKDNHISFQCESMATVEKKLKEMKIEYVQSRVEEGGICVD 119

Query: 121 QLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCN 162
           QLFFHDPDGSMIEICNCD LPV+PL G       C S +NCN
Sbjct: 120 QLFFHDPDGSMIEICNCDNLPVIPLGGGGGDTTLC-SRINCN 160

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566967|ref|XP_002524466.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223536254|gb|EEF37906.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 123/167 (73%), Positives = 145/167 (86%), Gaps = 7/167 (4%)

Query: 1   MKESVEN-PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGM 59
           MK S++N PL LKSLNHIS+VCRS++ S+DFYQ+VLGFFP+RRPGSFDFDGA  LFNYG+
Sbjct: 1   MKGSIKNNPLQLKSLNHISVVCRSLKKSIDFYQDVLGFFPVRRPGSFDFDGA-WLFNYGI 59

Query: 60  GIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINV 119
           GIHLL+SE+P+N+PK  + INPKDNHISFQCE+MA VE+RL+EMK++ VK RVEEGGI V
Sbjct: 60  GIHLLQSEDPENMPKINQ-INPKDNHISFQCESMATVEKRLQEMKVECVKGRVEEGGIYV 118

Query: 120 DQLFFHDPDGSMIEICNCDVLPVVPLAGD---AVRIRSCTSTVNCNF 163
           DQLFFHDPDGSMIEICNCDVLPV+PL GD    V +RSC S +NCN 
Sbjct: 119 DQLFFHDPDGSMIEICNCDVLPVIPLGGDNNNNVMVRSC-SLLNCNI 164

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255636198|gb|ACU18440.1| unknown [Glycine max]

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 121/169 (71%), Positives = 138/169 (81%), Gaps = 5/169 (2%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG 60
           MKESV NPL L+S+NHISL+CRSVE S+DFYQNVLGF+PIRRPGS DFDGA  LF YG+G
Sbjct: 1   MKESVGNPLRLQSVNHISLICRSVEQSMDFYQNVLGFYPIRRPGSLDFDGAW-LFGYGIG 59

Query: 61  IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 120
           IHLL++E P+ LPK  K INPKDNHISFQCE+M  VE++LKEM+IDYV++ VEEGGI VD
Sbjct: 60  IHLLEAENPEKLPKK-KEINPKDNHISFQCESMVAVEKKLKEMEIDYVRATVEEGGIQVD 118

Query: 121 QLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQ 169
           QLFFHDPDG MIEICNCD LPV+PL G+    RSC S VN    Q Q Q
Sbjct: 119 QLFFHDPDGFMIEICNCDSLPVIPLVGEVA--RSC-SLVNLEKMQNQQQ 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|194466169|gb|ACF74315.1| lactoylglutathione lyase [Arachis hypogaea]

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 121/184 (65%), Positives = 146/184 (79%), Gaps = 5/184 (2%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG 60
           MKES+ NPL LKSLNHISLVCRSVE S+DFYQNVLGFFPIRRPGSFDFDGA  LF +G+G
Sbjct: 1   MKESMGNPLQLKSLNHISLVCRSVEQSMDFYQNVLGFFPIRRPGSFDFDGAW-LFGFGIG 59

Query: 61  IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 120
           IHLL++E+P+ LPK  K INPKDNHISFQCE M  VE++LKEM I++V++RVEEGGI VD
Sbjct: 60  IHLLQAEDPEKLPKK-KEINPKDNHISFQCECMEAVEKKLKEMDINHVRARVEEGGIQVD 118

Query: 121 QLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQSCL 180
           QLFFHDPDG M+EICNC+ LPV+PL G+    RSC+  +  + H+ +    PQ+     L
Sbjct: 119 QLFFHDPDGFMVEICNCECLPVIPLVGEVA--RSCSRVIMTHHHRFRTWS-PQLPAGKPL 175

Query: 181 SDSI 184
           +D I
Sbjct: 176 TDII 179

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553127|ref|XP_002517606.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223543238|gb|EEF44770.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  239 bits (610), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 122/175 (69%), Positives = 143/175 (81%), Gaps = 7/175 (4%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG 60
           MKE+  NPL LKSLNHISL+CRSVE S+DFYQNVLGF PIRRPGSFDFDGA  LF +G+G
Sbjct: 1   MKENTGNPLHLKSLNHISLLCRSVEESIDFYQNVLGFVPIRRPGSFDFDGAW-LFGFGIG 59

Query: 61  IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 120
           IHLL+SE+P+N+PK  + INPKDNHISFQCE+M  VE++LKEM+I YV++ VEEGGI+VD
Sbjct: 60  IHLLQSEDPENMPKKSE-INPKDNHISFQCESMGAVEKKLKEMEIKYVRATVEEGGIHVD 118

Query: 121 QLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNF--HQQQIQQEPQ 173
           QLFFHDPDG MIEICNCD LPV+PLAG+    RSC S VN     H +Q+ Q  Q
Sbjct: 119 QLFFHDPDGFMIEICNCDSLPVIPLAGEMA--RSC-SRVNLQMIQHNKQMHQVVQ 170

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723359|ref|NP_001237532.1| uncharacterized protein LOC100306100 [Glycine max] gi|255627549|gb|ACU14119.1| unknown [Glycine max]

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 114/156 (73%), Positives = 132/156 (84%), Gaps = 4/156 (2%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG 60
           MKESV NPL L+S+NHISL+CRSVE S+DFYQNVLGF+PIRRPGS DFDGA  LF YG+G
Sbjct: 1   MKESVGNPLRLQSVNHISLICRSVEQSMDFYQNVLGFYPIRRPGSLDFDGAW-LFGYGIG 59

Query: 61  IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 120
           IHLL++E P+ LPK  K INPKDNHISFQCE+M  VE++LKEM+IDY ++ VEEGGI VD
Sbjct: 60  IHLLEAENPEKLPKK-KEINPKDNHISFQCESMVAVEKKLKEMEIDYARATVEEGGIQVD 118

Query: 121 QLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 156
           QLFFHDPDG MIEICNCD LPV+PL G+    RSC+
Sbjct: 119 QLFFHDPDGFMIEICNCDSLPVIPLVGEVA--RSCS 152

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436156|ref|XP_004135860.1| PREDICTED: uncharacterized protein LOC101209593 [Cucumis sativus] gi|449491017|ref|XP_004158775.1| PREDICTED: uncharacterized LOC101209593 [Cucumis sativus]

 Score =  234 bits (597), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 115/156 (73%), Positives = 134/156 (85%), Gaps = 4/156 (2%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG 60
           MKES  NPL LKS+NHISL+C+SVE S+ FYQN+LGFFPIRRPGSF FDGA  LF YG+G
Sbjct: 1   MKESEGNPLHLKSINHISLLCKSVEESIYFYQNILGFFPIRRPGSFKFDGAW-LFGYGIG 59

Query: 61  IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 120
           IHLL+SE+P+NLPK GK INPKDNHISFQCE+M  VE++LKEM+I+YV++ VEEGGI VD
Sbjct: 60  IHLLQSEKPENLPKKGK-INPKDNHISFQCESMGAVEKKLKEMEIEYVRAVVEEGGIQVD 118

Query: 121 QLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 156
           QLFFHDPDG MIEICNCD LPV+PL G+    RSC+
Sbjct: 119 QLFFHDPDGFMIEICNCDNLPVIPLGGEVS--RSCS 152

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506784|gb|AFK41458.1| unknown [Lotus japonicus] gi|388522799|gb|AFK49461.1| unknown [Lotus japonicus]

 Score =  233 bits (593), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 113/156 (72%), Positives = 133/156 (85%), Gaps = 4/156 (2%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG 60
           MK+SV NPL LKS+NHISL+CRSVE S+ FYQ+VLGFFPIRRPGSFDFDGA  LF YG+G
Sbjct: 1   MKDSVGNPLHLKSVNHISLICRSVEESMAFYQDVLGFFPIRRPGSFDFDGAW-LFGYGIG 59

Query: 61  IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 120
           IHLL++E P+ LP+  K INPKDNHISFQCE+M  VE++LK+M+I YV++ VEEGGI VD
Sbjct: 60  IHLLEAENPEKLPRK-KEINPKDNHISFQCESMGAVEKKLKDMEIAYVRATVEEGGIQVD 118

Query: 121 QLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 156
           QLFFHDPDG MIEICNCD LPV+PLAG+    RSC+
Sbjct: 119 QLFFHDPDGFMIEICNCDSLPVIPLAGELA--RSCS 152

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317106739|dbj|BAJ53235.1| JHL06P13.16 [Jatropha curcas]

 Score =  231 bits (588), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 112/156 (71%), Positives = 133/156 (85%), Gaps = 4/156 (2%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG 60
           MKE+  NPL LKSLNHIS +C+SVE S+DFY+NVLGF PIRRPGSFDFDGA  L+ YG+G
Sbjct: 1   MKETTGNPLHLKSLNHISHLCKSVEQSVDFYENVLGFVPIRRPGSFDFDGAW-LYGYGIG 59

Query: 61  IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 120
           IHLL+SE+PDN+PK  + INPKDNHISFQCE+M  VE++LKEM I +V++ VEEGGI+VD
Sbjct: 60  IHLLQSEDPDNMPKKTE-INPKDNHISFQCESMGAVEKKLKEMGIKHVRAMVEEGGIHVD 118

Query: 121 QLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 156
           QLFFHDPDG MIEICNCD LPV+PLAG+    RSC+
Sbjct: 119 QLFFHDPDGFMIEICNCDSLPVIPLAGEVA--RSCS 152

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721390|ref|NP_001235416.1| uncharacterized protein LOC100305695 [Glycine max] gi|255626337|gb|ACU13513.1| unknown [Glycine max]

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 115/169 (68%), Positives = 137/169 (81%), Gaps = 6/169 (3%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG 60
           MKE+V NPL LKS+NHISL+C SV+ S++FYQN+LGFFPIRRPGSFDFDGA  LF YG+G
Sbjct: 1   MKENVGNPLHLKSVNHISLICTSVKESINFYQNLLGFFPIRRPGSFDFDGAW-LFGYGIG 59

Query: 61  IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 120
           IHLL++E+PDN+P+  K INPKDNHISFQCE+M  VE++L EM+I+YV + VEEGGI VD
Sbjct: 60  IHLLQAEDPDNVPRKTK-INPKDNHISFQCESMGAVEKKLGEMEIEYVHATVEEGGIKVD 118

Query: 121 QLFFHDPDGSMIEICNCDVLPVVPLAGDA---VRIRSCTSTVNCNFHQQ 166
           QLFFHDPDG MIEICNCD LPV+PLA        +RSC S +N    QQ
Sbjct: 119 QLFFHDPDGFMIEICNCDSLPVIPLAASGNNNGMVRSC-SRLNLQILQQ 166

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	195
TAIR|locus:2016254	167	GLYI7 "AT1G80160" [Arabidopsis	0.779	0.910	0.698	1.6e-54
TAIR|locus:2037728	174	GLYI4 "AT1G15380" [Arabidopsis	0.779	0.873	0.666	3.5e-52
TAIR|locus:2057522	184	GLYI8 "AT2G28420" [Arabidopsis	0.723	0.766	0.548	5.3e-40
TIGR_CMR|CPS_2825	128	CPS_2825 "glyoxylase family pr	0.625	0.953	0.288	8.7e-08
TAIR|locus:2045482	135	AT2G32090 "AT2G32090" [Arabido	0.635	0.918	0.274	1.8e-07
TAIR|locus:2164600	197	AT5G57040 "AT5G57040" [Arabido	0.574	0.568	0.292	1.1e-05
TIGR_CMR|BA_0607	128	BA_0607 "glyoxylase family pro	0.6	0.914	0.253	2e-05
ZFIN|ZDB-GENE-050522-174	163	zgc:112315 "zgc:112315" [Danio	0.589	0.705	0.237	0.00026
TIGR_CMR|BA_2042	138	BA_2042 "fosfomycin resistance	0.574	0.811	0.264	0.00053
UNIPROTKB|F1SNR0	176	MCEE "Uncharacterized protein"	0.656	0.727	0.304	0.00077

TAIR|locus:2016254 GLYI7 "AT1G80160" [Arabidopsis thaliana (taxid:3702)]

 Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
 Identities = 109/156 (69%), Positives = 128/156 (82%)

Query:     1 MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG 60
             MK+   NPL +KSLNHISL+CRSVE S+ FYQNVLGF PIRRP SFDFDGA  LF +G+G
Sbjct:     1 MKDETGNPLHIKSLNHISLLCRSVEESISFYQNVLGFLPIRRPDSFDFDGAW-LFGHGIG 59

Query:    61 IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 120
             IHLL+S EP+ L K  + INPKDNHISFQCE+M  VE++LKEM+I+YV++ VEEGGI VD
Sbjct:    60 IHLLQSPEPEKLLKKTE-INPKDNHISFQCESMEAVEKKLKEMEIEYVRAVVEEGGIQVD 118

Query:   121 QLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 156
             QLFFHDPD  MIEICNCD LPV+PLAG+  R  SC+
Sbjct:   119 QLFFHDPDAFMIEICNCDSLPVIPLAGEMAR--SCS 152

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009414 "response to water deprivation" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2037728 GLYI4 "AT1G15380" [Arabidopsis thaliana (taxid:3702)]

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 104/156 (66%), Positives = 125/156 (80%)

Query:     1 MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG 60
             MKE   NPL L SLNH+S++CRSV+ S++FYQ VLGF PIRRP S +F+GA  LF +G+G
Sbjct:     1 MKEDAGNPLHLTSLNHVSVLCRSVDESMNFYQKVLGFIPIRRPESLNFEGAW-LFGHGIG 59

Query:    61 IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 120
             IHLL + EP+ LPK    INPKDNHISFQCE+M +VE++L+EM IDYV++ VEEGGI VD
Sbjct:    60 IHLLCAPEPEKLPKKTA-INPKDNHISFQCESMGVVEKKLEEMGIDYVRALVEEGGIQVD 118

Query:   121 QLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 156
             QLFFHDPDG MIEICNCD LPVVPL G+  R  SC+
Sbjct:   119 QLFFHDPDGFMIEICNCDSLPVVPLVGEMAR--SCS 152

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2057522 GLYI8 "AT2G28420" [Arabidopsis thaliana (taxid:3702)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 79/144 (54%), Positives = 109/144 (75%)

Query:    11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
             L +LNH+S +C+ V+ SL+FY  VLGF  I RP SFDFDGA  LFNYG+GIHL+++++ D
Sbjct:    18 LMALNHVSRLCKDVKKSLEFYTKVLGFVEIERPASFDFDGAW-LFNYGVGIHLVQAKDQD 76

Query:    71 NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRV-EEGGINVDQLFFHDPDG 129
              LP    +++P DNHISFQCE+M  +E+RLKE+K+ Y+K  V +E    +DQLFF+DPDG
Sbjct:    77 KLPSDTDHLDPMDNHISFQCEDMEALEKRLKEVKVKYIKRTVGDEKDAAIDQLFFNDPDG 136

Query:   130 SMIEICNCDVLPVVPL-AGDAVRI 152
              M+EICNC+ L +VP  + DA+R+
Sbjct:   137 FMVEICNCENLELVPCHSADAIRL 160

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009845 "seed germination" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

TIGR_CMR|CPS_2825 CPS_2825 "glyoxylase family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 36/125 (28%), Positives = 54/125 (43%)

Query:    11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
             L  ++H++++C   E S DFY  +LGF  I      D D          G  +     PD
Sbjct:     2 LNGIHHVAIICSDYEKSKDFYTRILGFKIIAENYRADRDSFKLDLALADGTQIELFSFPD 61

Query:    71 NLPKAGKNINPKD-NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDG 129
               PK       +   H++F  EN+  V + L  + +D    RV+E        FF DPDG
Sbjct:    62 -APKRPSFPEAQGLRHLAFNVENVEAVSQYLTNLGVDVESIRVDEY-TGKQFTFFSDPDG 119

Query:   130 SMIEI 134
               +E+
Sbjct:   120 LPLEL 124

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

TAIR|locus:2045482 AT2G32090 "AT2G32090" [Arabidopsis thaliana (taxid:3702)]

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 37/135 (27%), Positives = 58/135 (42%)

Query:    11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
             + SL HI+     +     FY+ V GF  I  P   D             +H+++     
Sbjct:     1 MASLGHIARESSDITRLAQFYKEVFGFEEIESPDFGDLQVVWLNLPGAFAMHIIQRNPST 60

Query:    71 NLPK-------AGKNIN--PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ 121
             NLP+       A K+ +  P  +HI F   N       LKE  I+  +  + +G   V Q
Sbjct:    61 NLPEGPYSATSAVKDPSHLPMGHHICFSVPNFDSFLHSLKEKGIETFQKSLPDG--KVKQ 118

Query:   122 LFFHDPDGSMIEICN 136
             +FF DPDG+ +E+ +
Sbjct:   119 VFFFDPDGNGLEVAS 133

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

TAIR|locus:2164600 AT5G57040 "AT5G57040" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 36/123 (29%), Positives = 58/123 (47%)

Query:    14 LNHISLVCRSVEASLDFYQNVLGF-FPIRRP-GSFDFDGACRLFNYGMGIHLLKSEEPDN 71
             ++H+ L+C ++E SL+FYQN+LG      RP     + GA       M IHL++   PD 
Sbjct:    79 VHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEM-IHLMELPNPD- 136

Query:    72 LPKAGK-NINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS 130
              P  G+     +D H      +++ ++  L +  I Y  S+     I     F  DPD +
Sbjct:   137 -PLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAI-----FTRDPDAN 190

Query:   131 MIE 133
              +E
Sbjct:   191 ALE 193

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

TIGR_CMR|BA_0607 BA_0607 "glyoxylase family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 101 (40.6 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 33/130 (25%), Positives = 59/130 (45%)

Query:    11 LKSLNHISLVCRSVEASLDFYQNVLGFFPI-----RRPGSFDFDGACRLFNYGMGIHLLK 65
             +  ++H++++C + E S DFY  +LGF  I     +   S+  D  C    Y   I L  
Sbjct:     3 ISRVHHVAIICSNYEVSKDFYTRILGFKAINEVYRKERDSYKLD-LCVGKEYQ--IELFS 59

Query:    66 SEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ-LFF 124
                P   P   +    +  H++F   N+    + L +  ++    R++E  I   + +FF
Sbjct:    60 FPNPPKRPSFPEAAGLR--HLAFAVTNIEEAVQDLSQCGVETEAIRIDE--ITGKKFVFF 115

Query:   125 HDPDGSMIEI 134
              DPDG  +E+
Sbjct:   116 QDPDGLPLEL 125

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

ZFIN|ZDB-GENE-050522-174 zgc:112315 "zgc:112315" [Danio rerio (taxid:7955)]

 Score = 103 (41.3 bits), Expect = 0.00026, P = 0.00026
 Identities = 33/139 (23%), Positives = 63/139 (45%)

Query:     8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSE 67
             P+ +  L+H+ L  R +  +  FY  VLG   +       F G  +  ++G        E
Sbjct:    36 PVLISHLDHLVLTVRDLNKTTKFYSEVLGMEVVT------FKGDRKALSFG--------E 81

Query:    68 EPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKS---RVEEGGIN------ 118
             +  NL + GK   PK    +    ++ ++ +   +   D++K+    +EEG ++      
Sbjct:    82 QKINLHQVGKEFEPKAQTPTPGSADLCLITKTPLKAVADHLKACGVTIEEGPVDRTGAVG 141

Query:   119 -VDQLFFHDPDGSMIEICN 136
              +  L+F DPD ++IE+ N
Sbjct:   142 PISSLYFRDPDDNLIEVSN 160

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_2042 BA_2042 "fosfomycin resistance protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 96 (38.9 bits), Expect = 0.00053, P = 0.00053
 Identities = 33/125 (26%), Positives = 58/125 (46%)

Query:    11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
             LK +NH+     ++E S+ FY+ VL    + R     +   C       G+ +  +EE  
Sbjct:     2 LKGINHLCFSVSNLEDSITFYEKVLEGELLVRGRKLAYFNIC-------GVWIALNEEI- 53

Query:    71 NLPKAGKNINPKDNHISFQCENMAIVE--RRLKEMKIDYVKSRVEEGGINVDQLFFHDPD 128
             ++P+  K I+    HI+F  E        +RL+E  +  ++ R E    + + ++F DPD
Sbjct:    54 HIPR--KEIHQSYTHIAFSVEQKDFERLLQRLEENDVHILQGR-ERDVRDCESIYFVDPD 110

Query:   129 GSMIE 133
             G   E
Sbjct:   111 GHKFE 115

GO:0004364 "glutathione transferase activity" evidence=ISS

GO:0046677 "response to antibiotic" evidence=ISS

UNIPROTKB|F1SNR0 MCEE "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 101 (40.6 bits), Expect = 0.00077, P = 0.00077
 Identities = 42/138 (30%), Positives = 63/138 (45%)

Query:     5 VENPLC-LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLF-NYG-MGI 61
             V +P+  L  LNHI++  + +E S  FY+NVLG   +    S    G   +F N G   +
Sbjct:    38 VASPVWNLGRLNHIAIAVQDLEKSKAFYKNVLGA-QVGEMASIPEHGVSVVFVNLGNTKM 96

Query:    62 HLLKSEEPDNLPKAG---KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 118
              LL     D+ P AG   KN     +HI  + +N+      LKE KI  +    + G   
Sbjct:    97 ELLHPLGNDS-PIAGFLQKNKAGGMHHICMEVDNINAAMMDLKEKKIRILSEEPKIGAHG 155

Query:   119 VDQLFFHDPD--GSMIEI 134
                +F H  D  G ++E+
Sbjct:   156 KPVIFLHPNDCGGVLVEL 173


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.139   0.431    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      195       182   0.00098  109 3  11 22  0.39    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  573 (61 KB)
  Total size of DFA:  164 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.44u 0.17s 16.61t   Elapsed:  00:00:01
  Total cpu time:  16.45u 0.17s 16.62t   Elapsed:  00:00:01
  Start:  Fri May 10 14:32:50 2013   End:  Fri May 10 14:32:51 2013

GO:0046491 "L-methylmalonyl-CoA metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004493 "methylmalonyl-CoA epimerase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00016866001 SubName- Full=Putative uncharacterized protein (Chromosome chr11 scaffold_13, whole genome shotgun sequence); (195 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	195
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	9e-34
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	2e-16
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	1e-14
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	3e-13
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	2e-12
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	2e-11
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	4e-08
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	7e-08
cd08348	134	cd08348, BphC2-C3-RGP6_C_like, The single-domain 2	2e-07
cd08363	131	cd08363, FosB, FosB, a fosfomycin resistance prote	6e-07
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	8e-07
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	1e-06
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	2e-06
cd07244	121	cd07244, FosA, FosA, a Fosfomycin resistance prote	2e-06
cd08345	113	cd08345, Fosfomycin_RP, Fosfomycin resistant prote	5e-06
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	1e-05
PRK04101	139	PRK04101, PRK04101, fosfomycin resistance protein	3e-05
cd08349	112	cd08349, BLMA_like, Bleomycin binding protein (BLM	3e-05
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	3e-04
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	4e-04
cd09013	121	cd09013, BphC-JF8_N_like, N-terminal, non-catalyti	0.004

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  115 bits (291), Expect = 9e-34
 Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG-IHLLKSEEPDNL 72
           L+H++L    +EAS  FY +VLG     RP  F F GA  L+      +HL++ + PD L
Sbjct: 1   LDHVALRVPDLEASRAFYTDVLGLEEGPRP-PFLFPGAW-LYAGDGPQLHLIEEDPPDAL 58

Query: 73  PKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMI 132
           P        +D+HI+F+ +++     RLK   + Y +S V   G  V QLF  DPDG+ I
Sbjct: 59  P----EGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDG--VRQLFVRDPDGNRI 112

Query: 133 EI 134
           E+
Sbjct: 113 EL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 71.3 bits (175), Expect = 2e-16
 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 9/119 (7%)

Query: 16  HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKA 75
           H+ L    +EA++ FY++VLGF  + R G         L   G  + L + +EP      
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDG--GGAEFAFLRLGGTRLELFEGDEPAPPSGG 58

Query: 76  GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 134
           G        H++F+ +++     RLK   ++ +    EE        +F DPDG++IE+
Sbjct: 59  GG------VHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGG-RVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 67.5 bits (164), Expect = 1e-14
 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 13/135 (9%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD--GACRLFNYGMGIHLLKSEEPDN 71
           ++H++L    +EAS+DFY +VLG   ++   +   D  G   LF  G G           
Sbjct: 3   IHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGF 62

Query: 72  LPKAGKNINPKD-----------NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 120
             +AG                   H++F+ ++ A  +  L  +  D V+  + E G    
Sbjct: 63  EGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGV 122

Query: 121 QLFFHDPDGSMIEIC 135
            ++F DPDG +IE+ 
Sbjct: 123 HVYFRDPDGILIELA 137

Length = 138

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 62.8 bits (153), Expect = 3e-13
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 10/118 (8%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSF-DFDGACRLFNYGMGIHLLKSEEPDNLPKAGK 77
           L    +EA+  FY+ +LGF      G + +F     L   G    +   E          
Sbjct: 1   LPVSDLEAARAFYEELLGFEVEEEDGEYAEFRLGLVLALGGFIELIGLPEPDAPGGGG-- 58

Query: 78  NINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 135
                  H+ F+ +++  +  RLK      ++   +       + +  DPDG++IE+ 
Sbjct: 59  ------VHLYFEVDDLDALVARLKAAGGTILEPPEDTPW-GGREFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 60.9 bits (148), Expect = 2e-12
 Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 12/126 (9%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLP 73
           ++H++L    +E SLDFY +VLGF  +      +       F  G  +  L   E     
Sbjct: 2   IDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGRVLELLLNETPPPA 61

Query: 74  KAGKNINPKDNHISFQCENMAIVER---RLKE--MKIDYVKSRVEEGGINVDQLFFHDPD 128
            AG       +HI+F   ++  V+    RLK   ++I     R   GG      +F DPD
Sbjct: 62  AAG----FGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGR---YSYFRDPD 114

Query: 129 GSMIEI 134
           G++IE+
Sbjct: 115 GNLIEL 120

Length = 120

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 58.8 bits (143), Expect = 2e-11
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 11/129 (8%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGI----HLLKSEEP 69
           L+H++LV R  + ++DFY +VLG   +++  + D  G   LF +G G+     LL   E 
Sbjct: 2   LHHVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLF-FGDGLGSPGTLLTFFEW 60

Query: 70  DNLPKAGKNINPKDNHISFQCENMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHD 126
            +    G+    + +HI+F   + A +E    RL+   +  V   V+  G     L+F D
Sbjct: 61  PDAGPKGRRGPGQIHHIAFSVPSEASLEAWRERLRAAGVP-VSGVVDRFGERS--LYFED 117

Query: 127 PDGSMIEIC 135
           PDG  +E+ 
Sbjct: 118 PDGIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 49.6 bits (119), Expect = 4e-08
 Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 11/130 (8%)

Query: 13  SLNHISLVCRSVEASLDFYQNVLGF--FPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
            ++H+ L  R +E S  FY  +LG   F   +                + +     E   
Sbjct: 1   GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDGRSWRAGDGGTYLVLQQADGESAG 60

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVER---RLKE--MKIDYVKSRVEEGGINVDQLFFH 125
              +     NP  +H++F+  +   V+    RL +   +I Y       GG     LFF 
Sbjct: 61  RHDRR----NPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFE 116

Query: 126 DPDGSMIEIC 135
           DPDG  +E+ 
Sbjct: 117 DPDGIRLELV 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 48.7 bits (117), Expect = 7e-08
 Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 16/133 (12%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACR----LFNYGMGIHLLKS 66
           +K ++H+ L    +EA+LDFY  VLG   +R         A R      N    +H +  
Sbjct: 1   IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVGR-KALRFGSQKIN----LHPVGG 55

Query: 67  EEPDNLPKAGKNINPKDNHISFQCE-NMAIVERRLKEMKIDYVKSRVEEGGI--NVDQLF 123
           E     P AG      D  +    E  +  +   L+   +   +  V   G    +  ++
Sbjct: 56  EF---EPAAGSPGPGSD-DLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVY 111

Query: 124 FHDPDGSMIEICN 136
           F DPDG++IE+ N
Sbjct: 112 FRDPDGNLIELSN 124

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176696 cd08348, BphC2-C3-RGP6_C_like, The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 22/142 (15%)

Query: 13  SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIH-----LLKSE 67
            L+H+ L  R +EA + FY++VLGF    R       G   L +     H     +    
Sbjct: 1   RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRG---PLGGLVFL-SRDPDEHHQIALITGRP 56

Query: 68  EPDNLPKAGKNINPKDNHISFQCENM---AIVERRLKEMKIDYVKSRVEEGGINVDQLFF 124
                  AG       NHI+F+ +++     +  RL+   I  V         ++   +F
Sbjct: 57  AAPPPGPAGL------NHIAFEVDSLDDLRDLYERLRAAGITPVWPVDHGNAWSI---YF 107

Query: 125 HDPDGSMIEICNCDVLPVVPLA 146
            DPDG+ +E+   D    V  A
Sbjct: 108 RDPDGNRLELF-VDTPWYVAQA 128

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, which form hexamers. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, its two domains do not belong to this subfamily. Length = 134

>gnl|CDD|176711 cd08363, FosB, FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

 Score = 46.4 bits (110), Expect = 6e-07
 Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 25/129 (19%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPI---RRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           +NH++    +++ S+ FY++V     +    +   F             G  L  +EEPD
Sbjct: 1   INHMTFSVSNLDKSISFYKHVFMEKLLVLGEKTAYFTIG----------GTWLALNEEPD 50

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVE--RRLKEMKIDYVKSR---VEEGGINVDQLFFH 125
            +P+    I     HI+F  E+        RLKE  ++ +  R   V +       ++F 
Sbjct: 51  -IPR--NEIRQSYTHIAFTIEDSEFDAFYTRLKEAGVNILPGRKRDVRDR----KSIYFT 103

Query: 126 DPDGSMIEI 134
           DPDG  +E+
Sbjct: 104 DPDGHKLEV 112

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 131

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 45.6 bits (109), Expect = 8e-07
 Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 33/137 (24%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRR----PGSF--------DFDGACRL---FNYG 58
             H  L  + +E SLDFY +VLG   +RR     G F        D D    L   +N+G
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 59  MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 118
                  +EEP +             H++F  +++     RL+EM ++  K     G   
Sbjct: 61  -------TEEPYDNGNG-------FGHLAFAVDDVYAACERLEEMGVEVTK---PPGDGG 103

Query: 119 VDQLFF-HDPDGSMIEI 134
           +  + F  DPDG  IE+
Sbjct: 104 MKGIAFIKDPDGYWIEL 120

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 29/139 (20%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIR---RP--GSFDFDGACRLFNYGMGIHLLK 65
           LK ++H++++C     S +FY  VLG   IR   RP   S+  D A    N    I L  
Sbjct: 1   LKGIHHVAIICSDYARSKEFYVEVLGLTLIRETYRPERKSYKLDLA---LNGEYQIELFS 57

Query: 66  SEEPDNLPKAGKNINPKD---NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQL 122
              P   P       P+     H++F  E++      LK   +      VE   I VD+ 
Sbjct: 58  FPNPPPRPS-----YPEACGLRHLAFAVEDIEAAVAELKAHGV-----EVEP--IRVDEF 105

Query: 123 ------FFHDPDGSMIEIC 135
                 FF+DPDG  +E+ 
Sbjct: 106 TGKRFTFFYDPDGLPLELY 124

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 26/127 (20%)

Query: 22  RSVEASLDFYQNVLGFFPI----RRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGK 77
             +EA+  FY++VLG   +    RR   F   G       GM + L    +P      G 
Sbjct: 9   DDLEAAEAFYEDVLGLELMLKEDRRLAFFWVGGR------GM-LLLF---DPGATSTPGG 58

Query: 78  NINPKDN----HISFQCENMAIV--ERRLKEMKIDYVKSRVE--EGGINVDQLFFHDPDG 129
            I P       H +F      +   E  L+   +  ++S V+   GG +   L+F DPDG
Sbjct: 59  EIPPHGGSGPGHFAFAIPAEELAEWEAHLEAKGVA-IESEVQWPRGGRS---LYFRDPDG 114

Query: 130 SMIEICN 136
           +++E+  
Sbjct: 115 NLLELAT 121

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|176668 cd07244, FosA, FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

 Score = 44.3 bits (105), Expect = 2e-06
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 21/125 (16%)

Query: 13  SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNL 72
            +NHI+L    +E S+ FY ++LGF   +    +D        +  + + +  +  P   
Sbjct: 1   GINHITLAVSDLERSVAFYVDLLGF---KLHVRWDKGAYLEAGDLWLCLSVDANVGP--- 54

Query: 73  PKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINV---DQLFFHDPDG 129
                       H +F     ++ E     +K    ++ V+E   N    D  +F DPDG
Sbjct: 55  -------AKDYTHYAF-----SVSEEDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDG 102

Query: 130 SMIEI 134
             +E+
Sbjct: 103 HKLEL 107

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 121

>gnl|CDD|176693 cd08345, Fosfomycin_RP, Fosfomycin resistant protein; inhibits the biological function of fosfomycin

 Score = 43.3 bits (102), Expect = 5e-06
 Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 15/121 (12%)

Query: 16  HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKA 75
           HI+L+ + +  S+ FY+++LG   I       +      F    G+ +   EE   L   
Sbjct: 1   HITLIVKDLNKSIAFYRDILGAELIYSSSKEAY------FELA-GLWICLMEEDS-LQGP 52

Query: 76  GKNINPKDNHISF--QCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIE 133
            +       HI+F  Q E       RLK + ++    R    G     ++F+DPDG ++E
Sbjct: 53  ERTY----THIAFQIQSEEFDEYTERLKALGVEMKPERPRVQG-EGRSIYFYDPDGHLLE 107

Query: 134 I 134
           +
Sbjct: 108 L 108

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 113

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 21/135 (15%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGF---FPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           ++HI +    +EA+L FY++VLG         P          L    + I L+   EP 
Sbjct: 1   IDHIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGVR-LAFLGLGNVQIELI---EPL 56

Query: 71  N--------LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQL 122
           +        L K G+ +    +HI+F+ +++     RLK   +  ++     G       
Sbjct: 57  DDDSPIAKFLEKRGEGL----HHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVA 112

Query: 123 FFHDPD--GSMIEIC 135
           F H  D  G +IE+ 
Sbjct: 113 FLHPKDTGGVLIELV 127

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|179740 PRK04101, PRK04101, fosfomycin resistance protein FosB; Provisional

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 25/131 (19%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPI---RRPGSFDFDGACRLFNYGMGIHLLKSE 67
           LK +NHI     ++E S++FY+ VLG   +   R+   FD +          G+ +  +E
Sbjct: 2   LKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGRKTAYFDLN----------GLWIALNE 51

Query: 68  EPDNLPKAGKNINPKDNHISF--QCENMAIVERRLKEMKIDYVKSR---VEEGGINVDQL 122
           E D +P+    I+    HI+F  + E+     +RLKE  ++ +  R     +       +
Sbjct: 52  EKD-IPR--NEIHQSYTHIAFSIEEEDFDHWYQRLKENDVNILPGRERDERDK----KSI 104

Query: 123 FFHDPDGSMIE 133
           +F DPDG   E
Sbjct: 105 YFTDPDGHKFE 115

Length = 139

>gnl|CDD|211357 cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 15/117 (12%)

Query: 19  LVCRSVEASLDFYQNVLGF---FPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKA 75
           L    +E SL FY++VLGF   F       +      ++   G  +HL + +  + +P  
Sbjct: 4   LPVSDIEKSLAFYRDVLGFEVDF-EHPEPLY-----AQVSRDGAQLHLSEHDGDEWVPL- 56

Query: 76  GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMI 132
           G+  N     +  + +++  +   LK      +    E+      +    DPDG+++
Sbjct: 57  GRGGN-----VYIEVDDVDALYAELKAKGAKLIVYPPEDQPWGQREFAVQDPDGNLL 108

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping. Length = 112

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 36/136 (26%), Positives = 50/136 (36%), Gaps = 35/136 (25%)

Query: 13  SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNL 72
            +  ++L    +E SL FYQ+VLG   + R  S    G       G    LL  EE  + 
Sbjct: 2   RIGAVTLRVADLERSLAFYQDVLGLEVLERTDSTAVLGT------GGKRPLLVLEEDPDA 55

Query: 73  PKAGKNI-----------NPKDNHISFQCENMAIVERRLKEMKIDYVKSR---VEEGGIN 118
           P A               +  D         +A   RRL E+ I    +    V E    
Sbjct: 56  PPAPPGTTGLYHFAILLPSRAD---------LARALRRLIELGIPLEGASDHLVSEA--- 103

Query: 119 VDQLFFHDPDGSMIEI 134
              L+  DP+G+ IEI
Sbjct: 104 ---LYLSDPEGNGIEI 116

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 16  HISLVCRSVEASLDFYQNVLGFFPIR--RPGSFDFDGA-CRLFN-YGMGIHLLKSEEPDN 71
           HI +V   ++A+  F+ ++LG  P    R    + D A  RL +   + + L++  + ++
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLGDGPAVEVELIQPLDGES 61

Query: 72  LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLF 123
               G    P  +HI++  +++     RL+   +         G       F
Sbjct: 62  FLDKGG---PGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|176715 cd09013, BphC-JF8_N_like, N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

 Score = 35.3 bits (82), Expect = 0.004
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 16/123 (13%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNL 72
           L H+ L+    E SL F+ +VLG     R G      +  L  +G    H LK  E    
Sbjct: 7   LAHVELLTPKPEESLWFFTDVLGLEETGREG-----QSVYLRAWGDYEHHSLKLTES--- 58

Query: 73  PKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLF-FHDPDGSM 131
           P+AG        HI+++  +   +ERR+  ++   +     EG     + + F  PDG  
Sbjct: 59  PEAGL------GHIAWRASSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHP 112

Query: 132 IEI 134
           +E+
Sbjct: 113 MEL 115

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. The enzymes in this family have an internal duplication. This family represents the N-terminal repeat. Length = 121

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	195
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.93
PRK11478	129	putative lyase; Provisional	99.86
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.83
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.83
PLN02300	286	lactoylglutathione lyase	99.82
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.82
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.81
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.81
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.81
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.8
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.8
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.8
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.8
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.8
PLN03042	185	Lactoylglutathione lyase; Provisional	99.8
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.8
PLN02367	233	lactoylglutathione lyase	99.8
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.79
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.79
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.79
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.78
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.78
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.78
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.78
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.77
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.77
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.77
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.77
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.77
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.77
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.77
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.76
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.76
PRK06724	128	hypothetical protein; Provisional	99.76
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.76
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.76
PRK10291	129	glyoxalase I; Provisional	99.76
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.75
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.75
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.75
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.75
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.75
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.74
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.74
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.74
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.74
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.74
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.73
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.73
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.73
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.72
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.72
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.72
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.72
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.72
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.71
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.71
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.7
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.69
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.69
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.69
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.69
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.69
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.69
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.69
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.68
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.68
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.68
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.68
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.66
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.65
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.65
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.64
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.62
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.61
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.61
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.49
PLN02300	286	lactoylglutathione lyase	99.48
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.46
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.35
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.25
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.24
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.23
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.21
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.15
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.02
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.96
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.83
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.74
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.73
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.72
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.71
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.67
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.59
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.47
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.44
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.31
PRK10148	147	hypothetical protein; Provisional	98.1
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.05
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.89
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.55
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	97.38
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	96.98
PF15067	236	FAM124: FAM124 family	96.43
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	95.92
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	94.9
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	94.85
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	92.69
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	92.23
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	91.6
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	91.59
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	90.44
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	90.36
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	89.58
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	89.42
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	86.89
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	85.11
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	84.84
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	83.76
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	82.98
PRK11700	187	hypothetical protein; Provisional	82.39
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	82.31
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	82.23
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	81.15
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	80.73
cd07268	149	Glo_EDI_BRP_like_4 This conserved domain belongs t	80.01

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.93  E-value=4.4e-25  Score=173.43  Aligned_cols=168  Identities=19%  Similarity=0.257  Sum_probs=137.1

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeC
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   91 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~   91 (195)
                      +.++.++|.|+|++++..||+++||+++..+.+.    ..  .+..|.. .|+.....+..... .....|++|+||.+|
T Consensus         9 ~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~~----~v--~L~vgg~-~LL~L~q~~~a~~~-~~~~aGLyH~AfLlP   80 (265)
T COG2514           9 TFVGAVTLNVRDLDSMTSFYQEILGLQVLEETDG----SV--TLGVGGT-PLLTLEQFPDARRP-PPRAAGLYHTAFLLP   80 (265)
T ss_pred             cEEEEEEEEeccHHHHHHHHHHhhCCeeeeccCc----eE--EEeeCCE-EEEEEEeCCCCCCC-CccccceeeeeeecC
Confidence            5688999999999999999999999999998763    22  4555544 33222221111111 156789999999999


Q ss_pred             ---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccchhhhhhhh
Q 029305           92 ---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQI  168 (195)
Q Consensus        92 ---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  168 (195)
                         |+..++.++.+.|+++.+..   ..+.++++||.||+||.||||.+++.+.|.+..+ .+.|.+ .++|++.++...
T Consensus        81 ~r~~L~~~l~hl~~~~~~l~Ga~---DH~vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~-~v~m~t-~~ld~~~ll~~~  155 (265)
T COG2514          81 TREDLARVLNHLAEEGIPLVGAS---DHLVSEALYLEDPEGNGIEIYADRPRSTWDWQND-QVKMDT-EPLDVEALLEEA  155 (265)
T ss_pred             CHHHHHHHHHHHHhcCCcccccC---cchhheeeeecCCCCCeEEEEecCChHHhcccCC-eeeecc-cccCHHHHhhhc
Confidence               79999999999999998654   3446799999999999999999999999999877 899998 999999999987


Q ss_pred             hhcC--------CCCCCCcccccccccccccc
Q 029305          169 QQEP--------QINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       169 ~~~~--------~~~~~~~~~~~~~~~~~~~~  192 (195)
                      +.+|        .|-|+-..+-|+.++..||.
T Consensus       156 ~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~  187 (265)
T COG2514         156 TKEPWTGLPAGTIIGHVHLKVADLEEAEQFYE  187 (265)
T ss_pred             cccccccCCCCcEEeEEEEEeCCHHHHHHHHH
Confidence            7444        58999999999999999985

>PRK11478 putative lyase; Provisional

Probab=99.86  E-value=1.9e-20  Score=134.70  Aligned_cols=125  Identities=22%  Similarity=0.308  Sum_probs=89.0

Q ss_pred             CcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEE---EeecCcEEEEeeeCCCCCCCCCCCCCCCCce
Q 029305            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACR---LFNYGMGIHLLKSEEPDNLPKAGKNINPKDN   84 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~---~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~   84 (195)
                      ++.+.+|+||.|.|+|++++.+||+++|||++..+.... ....|.   .+..+..+++++...+...+. . ....|..
T Consensus         1 ~~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~-~~~~g~~   77 (129)
T PRK11478          1 MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYRE-ARDSWKGDLALNGQYVIELFSFPFPPERPS-R-PEACGLR   77 (129)
T ss_pred             CCCcceecEEEEEcCCHHHHHHHHHHHhCCEeccccccc-ccccceeeEecCCCcEEEEEEecCCCCCCC-C-CCCCcee
Confidence            357889999999999999999999999999986532111 011221   233345677766543322111 1 3345788


Q ss_pred             EEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           85 HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        85 Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      |+||.|+|+++++++|+++|+++...... ...+.+.+||.|||||.|||++
T Consensus        78 hi~f~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         78 HLAFSVDDIDAAVAHLESHNVKCEAIRVD-PYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEEEEeCCHHHHHHHHHHcCCeeeccccC-CCCCCEEEEEECCCCCEEEEEe
Confidence            99999999999999999999998654321 2224478999999999999987

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=3.6e-19  Score=130.42  Aligned_cols=125  Identities=17%  Similarity=0.269  Sum_probs=90.2

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCC--------CCC---ccEEEee---cCcEEEEeeeCCCCCCCC--
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--------DFD---GACRLFN---YGMGIHLLKSEEPDNLPK--   74 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~--------~~~---~~~~~~~---~g~~~~ll~~~~~~~~~~--   74 (195)
                      +++++||.|.|+|+++|.+||++ |||++..+....        +..   ..+..+.   .+..++|++...+...+.  
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~   79 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHR   79 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCC
Confidence            46899999999999999999999 999886553210        011   1111222   235688887554432221  


Q ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           75 AGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        75 ~~~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      .......|..|+||.|+|+++++++|+++|+++..++.. ...+.+.+||+||||+.|||++.
T Consensus        80 ~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~-~~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          80 PAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQ-YENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCcee-cCCCeEEEEEECCCCCEEEeeec
Confidence            111345678999999999999999999999999876533 23456889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.83  E-value=2.5e-19  Score=132.11  Aligned_cols=118  Identities=19%  Similarity=0.217  Sum_probs=82.4

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCC---CccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF---DGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNH   85 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~---~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~H   85 (195)
                      +.+.+|+||+|.|+|+++|.+||+++|||++..+....+.   .+.|  +..+...+.+....         ...+++.|
T Consensus         2 ~~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~--l~~~~~~h~~~~~~---------~~~~~~~H   70 (143)
T cd07243           2 IGAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSF--LSCSNKPHDIAFVG---------GPDGKLHH   70 (143)
T ss_pred             CCCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEE--EecCCCcceEEEec---------CCCCCceE
Confidence            3568899999999999999999999999997665321100   1223  22222233332211         11357899


Q ss_pred             EEEEeCCHHH---HHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           86 ISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        86 iaf~v~dl~~---~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +||.|+++++   +.++|+++|+++...+...+..+.+.+||.|||||.|||+..
T Consensus        71 iaf~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          71 FSFFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            9999998877   568999999998755532221235789999999999999875

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>PLN02300 lactoylglutathione lyase

Probab=99.82  E-value=1.4e-19  Score=147.80  Aligned_cols=147  Identities=16%  Similarity=0.199  Sum_probs=103.6

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCC--CCCccEEEeecC---c--EEEEeeeCCCCCCCCCCCCCCC
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--DFDGACRLFNYG---M--GIHLLKSEEPDNLPKAGKNINP   81 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~g---~--~~~ll~~~~~~~~~~~~~~~~~   81 (195)
                      +.+.+|+|+.|.|+|++++++||+++|||++..+....  .+...|  +..+   .  .+.+....   ... .. ....
T Consensus        20 ~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~--l~~g~~~~~~~lel~~~~---~~~-~~-~~~~   92 (286)
T PLN02300         20 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAF--LGYGPEDSNFVVELTYNY---GVD-KY-DIGT   92 (286)
T ss_pred             cccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEE--EccCCCCCceEEEEeccC---CCC-cc-ccCC
Confidence            56899999999999999999999999999987653211  111223  2222   1  12222111   111 11 3456


Q ss_pred             CceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccch
Q 029305           82 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNC  161 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~~  161 (195)
                      +..|++|.|+|++++.++|+++|+++...+....+.+.+.+||.|||||.|||++....                     
T Consensus        93 g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~---------------------  151 (286)
T PLN02300         93 GFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPT---------------------  151 (286)
T ss_pred             CccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCC---------------------
Confidence            78999999999999999999999998876643322234678999999999999984211                     


Q ss_pred             hhhhhhhhhcCCCCCCCcccccccccccccc
Q 029305          162 NFHQQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                               +..+.|+.+.++|++++.+||.
T Consensus       152 ---------~~~~~~~~l~~~d~~~a~~Fy~  173 (286)
T PLN02300        152 ---------PEPLCQVMLRVGDLDRSIKFYE  173 (286)
T ss_pred             ---------CCcceeEEEEeCCHHHHHHHHH
Confidence                     1245678888888888888884

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.82  E-value=4.7e-19  Score=133.27  Aligned_cols=127  Identities=18%  Similarity=0.306  Sum_probs=87.4

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCC---C----C------CCc-----cEEEe--ecCcEEEEeeeCCCCC
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS---F----D------FDG-----ACRLF--NYGMGIHLLKSEEPDN   71 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~---~----~------~~~-----~~~~~--~~g~~~~ll~~~~~~~   71 (195)
                      .+|+||+|.|+|+++|++||+++|||++..+...   .    .      +..     .+..+  ..+..++|++...+..
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~   82 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQEN   82 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCC
Confidence            5789999999999999999999999987532110   0    0      000     11122  2345688887765432


Q ss_pred             CCCCCCCCCCCceEEEEEeCCHHHHHHHHHhCCCeEecccee---cCCcceEEEEEECCCCCEEEEEecC
Q 029305           72 LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE---EGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        72 ~~~~~~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~---~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      ..........|+.|+||.|+|+++++++|+++|+++...+..   .+....+.+||+|||||.|||++..
T Consensus        83 ~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645        83 PEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHS  152 (162)
T ss_pred             CCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcC
Confidence            221111235789999999999999999999999876443211   1111237899999999999999864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=6.3e-19  Score=125.56  Aligned_cols=120  Identities=18%  Similarity=0.259  Sum_probs=83.7

Q ss_pred             ccceEEEEcCCHHHHHHHHHhccCCeEeecCC--CCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEe
Q 029305           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPG--SFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   90 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v   90 (195)
                      +|+||.|.|+|++++++||+++|||++..+..  ...+...|..+..+..+++++.......+ .. ....|..|+||.|
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~-~~~~g~~hi~f~v   78 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSP-NE-GERTGWAHLAFSV   78 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCc-cc-CCCCceEEEEEEC
Confidence            47899999999999999999999999764421  12222334223334567777543221111 11 3446789999999


Q ss_pred             C---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEE
Q 029305           91 E---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  135 (195)
Q Consensus        91 ~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~  135 (195)
                      +   ++++++++|+++|+++...+.. .+.+.+.++++|||||.|||.
T Consensus        79 ~~~~~v~~~~~~l~~~g~~~~~~~~~-~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          79 GSKEAVDELTERLRADGYLIIGEPRT-TGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CCHHHHHHHHHHHHHCCCEEEeCcee-cCCCeEEEEEECCCCCEEEeC
Confidence            6   5899999999999998875532 223445678999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=2.8e-18  Score=122.62  Aligned_cols=121  Identities=28%  Similarity=0.371  Sum_probs=86.6

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCc-EEEEeeeCCCCCCCCCCCCCCCCceEEEEEe
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGM-GIHLLKSEEPDNLPKAGKNINPKDNHISFQC   90 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~-~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v   90 (195)
                      ++|+||.|.|+|++++.+||+++|||++....+    ...  .+..+. ..++.....+.. .... ....+..|++|.|
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~~--~l~~~~~~~~l~l~~~~~~-~~~~-~~~~~~~hi~f~v   72 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD----STA--VLGTGGKRPLLVLEEDPDA-PPAP-PGATGLYHFAILL   72 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC----CEE--EEecCCCeEEEEEEeCCCC-Cccc-CCCCcEEEEEEEC
Confidence            478999999999999999999999999987743    223  333332 223222222211 1111 4456789999999


Q ss_pred             C---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCC
Q 029305           91 E---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVV  143 (195)
Q Consensus        91 ~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~  143 (195)
                      +   ++++++++|.++|+++....  ..+ ..+.+||.|||||.|||....+...|
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~~--~~~-~~~~~~~~DPdG~~iEi~~~~~~~~~  125 (125)
T cd07255          73 PSRADLAAALRRLIELGIPLVGAS--DHL-VSEALYLSDPEGNGIEIYADRPREEW  125 (125)
T ss_pred             CCHHHHHHHHHHHHHcCCceeccc--ccc-ceeEEEEECCCCCEEEEEEecCccCC
Confidence            8   58999999999999876543  222 23789999999999999998776554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.81  E-value=1.9e-18  Score=129.35  Aligned_cols=120  Identities=21%  Similarity=0.325  Sum_probs=86.3

Q ss_pred             ccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec---CcEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY---GMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~---g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      +|+||+|.|+|++++.+||+++|||++..+...   ...| ....   +..+.+.+....   .... ....++.|+||.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~~---~~~~-~~~~~~~~~~l~l~~~~~~---~~~~-~~~~~l~Hiaf~   72 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEGD---RVRL-EEGGGGPGAVVDVLEEPDQ---PRGR-PGAGTVHHVAFR   72 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeCC---EEEE-EecCCCCCCEEEEEeCCCC---CCCc-ccCCceEEEEEE
Confidence            589999999999999999999999999876431   1122 2221   455666654311   1111 334678999999


Q ss_pred             eCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCC
Q 029305           90 CEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVV  143 (195)
Q Consensus        90 v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~  143 (195)
                      |+|   +++++++|++.|+++....  ..+ +.+++||.|||||.|||+.+.+...|
T Consensus        73 v~d~~dvd~~~~~L~~~Gv~~~~~~--~~~-~~~s~yf~DPdG~~iEl~~~~~~~~~  126 (157)
T cd08347          73 VPDDEELEAWKERLEALGLPVSGIV--DRF-YFKSLYFREPGGILFEIATDGPGFTV  126 (157)
T ss_pred             CCCHHHHHHHHHHHHHCCCCccccc--ccc-cEEEEEEECCCCcEEEEEECCCCccc
Confidence            997   9999999999999864432  222 34789999999999999998654433

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=2.6e-18  Score=122.12  Aligned_cols=121  Identities=26%  Similarity=0.468  Sum_probs=87.4

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec-CcEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY-GMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      +++|+|+.|.|+|++++++||+++|||+...+.+..   ... .+.. +..+++...... ..+... ....+..|++|.
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~---~~~-~~~~~~~~~~l~~~~~~-~~~~~~-~~~~~~~hi~~~   74 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV---GRK-ALRFGSQKINLHPVGGE-FEPAAG-SPGPGSDDLCLI   74 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC---Cce-EEEeCCEEEEEecCCCc-cCcCcc-CCCCCCceEEEE
Confidence            468999999999999999999999999998765421   121 2333 345555543322 111111 345678999999


Q ss_pred             eC-CHHHHHHHHHhCCCeEeccceecCC--cceEEEEEECCCCCEEEEEec
Q 029305           90 CE-NMAIVERRLKEMKIDYVKSRVEEGG--INVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        90 v~-dl~~~~~~l~~~gv~~~~~~~~~~~--~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      ++ ++++++++|+++|+++...+....+  ...+.+||.|||||.||++++
T Consensus        75 ~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          75 TEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             ecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            98 4999999999999998766543221  234789999999999999873

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.80  E-value=1.3e-18  Score=126.99  Aligned_cols=123  Identities=15%  Similarity=0.157  Sum_probs=88.2

Q ss_pred             cceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCC-CCCCCCCCceEEEEEeC
Q 029305           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPK-AGKNINPKDNHISFQCE   91 (195)
Q Consensus        14 i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~-~~~~~~~g~~Hiaf~v~   91 (195)
                      |+|+.|.|+|++++.+||+++|||++..+....  ...+..+..+ ..+.+........... .......+..|++|.|+
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~   78 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVD   78 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeC
Confidence            589999999999999999999999998765421  1122233333 3344433222111100 00124567899999999


Q ss_pred             CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           92 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        92 dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      |+++++++|+++|+++..++.. ..++.+.++++||||+.|||++...
T Consensus        79 Dvda~~~~l~~~G~~v~~~p~~-~~~~~~~~~i~dp~G~~ie~~~~~~  125 (136)
T cd08342          79 DAAAAYERAVARGAKPVQEPVE-EPGELKIAAIKGYGDSLHTLVDRKG  125 (136)
T ss_pred             CHHHHHHHHHHcCCeEccCcee-cCCeEEEEEEeccCCcEEEEEecCC
Confidence            9999999999999999987755 2346689999999999999999543

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=3.5e-18  Score=121.41  Aligned_cols=122  Identities=26%  Similarity=0.436  Sum_probs=87.1

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEE-Ee--ecCcEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACR-LF--NYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~-~~--~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      +.+|+||.|.|.|++++++||+++|||++..+....+ ...|. .+  ..+..++++........+.  .....|..|++
T Consensus         1 ~~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~i~l~~~~~~~~~~~--~~~~~g~~h~~   77 (125)
T cd08352           1 LFGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPE-RGSYKLDLLLNGGYQLELFSFPNPPERPS--YPEACGLRHLA   77 (125)
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCC-CCcEEEEEecCCCcEEEEEEcCCCCCCCC--CCcCCCceEEE
Confidence            4679999999999999999999999999876532111 12331 12  2345566665443221111  13456789999


Q ss_pred             EEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           88 FQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        88 f~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      |.|+|+++++++|+++|+++...+.. ...+.+.+|+.||+||.|||++
T Consensus        78 ~~v~d~~~~~~~l~~~G~~~~~~~~~-~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          78 FSVEDIEAAVKHLKAKGVEVEPIRVD-EFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EEeCCHHHHHHHHHHcCCcccccccc-CCCceEEEEEECCCCCEEEecC
Confidence            99999999999999999998765422 2234568999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.80  E-value=2e-18  Score=128.06  Aligned_cols=128  Identities=21%  Similarity=0.285  Sum_probs=86.3

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC--cEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g--~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      ..++|+||.|.|+|++++.+||+++|||++..+....+....+..+..+  .....+..........  .....+..|++
T Consensus        14 ~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~g~~hi~   91 (150)
T TIGR00068        14 KKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEK--YDLGNGFGHIA   91 (150)
T ss_pred             CCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCc--ccCCCceeEEE
Confidence            4688999999999999999999999999987654311111111123222  1111222211101111  12345789999


Q ss_pred             EEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           88 FQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        88 f~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      |.|+|+++++++|.++|+++...+....+.+.+.+||.|||||.|||++..+
T Consensus        92 f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  143 (150)
T TIGR00068        92 IGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKS  143 (150)
T ss_pred             EecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCc
Confidence            9999999999999999999877653323224468899999999999998643

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.80  E-value=2.4e-18  Score=124.88  Aligned_cols=118  Identities=19%  Similarity=0.378  Sum_probs=84.3

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCC---ccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD---GACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~---~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      |+.+|+||.|.|+|+++|.+||+++|||+...+.+...+.   ..| ....+..+.+.....         ....+..|+
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~~~~~---------~~~~~~~Hi   70 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKF-FLIGGLWIAIMEGDS---------LQERTYNHI   70 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeE-EEcCCeEEEEecCCC---------CCCCCceEE
Confidence            4678999999999999999999999999887665422111   112 222233444432111         112368999


Q ss_pred             EEEeC--CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           87 SFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        87 af~v~--dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      ||.|+  +++++.++|+++|+++........+ .++.+||.|||||.|||....
T Consensus        71 af~v~~~~ld~~~~~l~~~gv~~~~~~~~~~~-~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          71 AFKISDSDVDEYTERIKALGVEMKPPRPRVQG-EGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             EEEcCHHHHHHHHHHHHHCCCEEecCCccccC-CceEEEEECCCCCEEEEecCC
Confidence            99998  7999999999999998654322222 347999999999999999753

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.80  E-value=3.2e-18  Score=131.06  Aligned_cols=128  Identities=22%  Similarity=0.286  Sum_probs=90.2

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCC--CCCccEE------------------EeecCcEEEEeeeCCCCC
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--DFDGACR------------------LFNYGMGIHLLKSEEPDN   71 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~--~~~~~~~------------------~~~~g~~~~ll~~~~~~~   71 (195)
                      -++.|+.|.|+|+++|++||+++|||++..+....  .+..++.                  ++..+..++|+......+
T Consensus        26 ~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~  105 (185)
T PLN03042         26 YIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTES  105 (185)
T ss_pred             cEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcc
Confidence            46899999999999999999999999988774311  1111110                  111234688876543322


Q ss_pred             CCC---CC--CCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCC
Q 029305           72 LPK---AG--KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLP  141 (195)
Q Consensus        72 ~~~---~~--~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~  141 (195)
                      .+.   ..  .....|+.|+||.|+|+++++++|+++|+++...+...  .+...+|++|||||.|||++..+..
T Consensus       106 ~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~--~~~~~~fi~DPdG~~IEl~e~~~~~  178 (185)
T PLN03042        106 DPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDG--KMKGLAFIKDPDGYWIEIFDLKRIG  178 (185)
T ss_pred             cccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccC--CceeEEEEECCCCCEEEEEECCCch
Confidence            110   00  01235899999999999999999999999998665322  1235688899999999999987654

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.80  E-value=7.1e-19  Score=144.52  Aligned_cols=157  Identities=17%  Similarity=0.198  Sum_probs=105.6

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC--cEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g--~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      +++|+||.|.|+|++++.+||+++|||++..+.+.    ..+ +...+  ....+....          ....++.|++|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~----~~~-~~~~~~~~~~~~~l~~----------~~~~g~~hiaf   66 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQ----RVY-LKAWDEWDHYSVILTE----------ADTAGLDHMAF   66 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCc----eEE-EEeccccccceEeecc----------CCCCceeEEEE
Confidence            57899999999999999999999999999876542    222 11111  111111111          12346899999


Q ss_pred             EeC---CHHHHHHHHHhCCCeEecccee-cCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccchhhh
Q 029305           89 QCE---NMAIVERRLKEMKIDYVKSRVE-EGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFH  164 (195)
Q Consensus        89 ~v~---dl~~~~~~l~~~gv~~~~~~~~-~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  164 (195)
                      .|+   ++++++++|++.|+++...+.. ..+ +.+.+||.|||||.|||+.......++....     .. ......  
T Consensus        67 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~-~g~~~~~~DPdG~~iEl~~~~~~~~~~~~~~-----~~-~~~~~~--  137 (303)
T TIGR03211        67 KVESEADLERLVKRLEAYGVGTGWIPAGELPG-VGRRVRFTLPSGHTMELYAEKEYVGELVGGL-----NP-DPWPDP--  137 (303)
T ss_pred             EeCCHHHHHHHHHHHHHcCCCeeeccCCCCCC-cceEEEEECCCCCEEEEEEcccccccccccc-----CC-cccccc--
Confidence            998   7999999999999998765421 122 2378999999999999999766433311111     00 111100  


Q ss_pred             hhhhhhcCCCCCCCcccccccccccccc
Q 029305          165 QQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                       .......+|+|+.+.++|++++.+||.
T Consensus       138 -~~~~~~~~i~Hi~l~V~Dl~~s~~FY~  164 (303)
T TIGR03211       138 -LRGVGARRLDHCLLYGEDVAENTRFFT  164 (303)
T ss_pred             -cCCcCceeEEEEeEEeCCHHHHHHHHH
Confidence             111234579999999999999999994

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>PLN02367 lactoylglutathione lyase

Probab=99.80  E-value=4.2e-18  Score=133.56  Aligned_cols=127  Identities=24%  Similarity=0.329  Sum_probs=89.8

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCC--CCCccEE------------------EeecCcEEEEeeeCCCCC
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--DFDGACR------------------LFNYGMGIHLLKSEEPDN   71 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~--~~~~~~~------------------~~~~g~~~~ll~~~~~~~   71 (195)
                      -.++|+.|.|+|+++|++||+++|||++..+.+..  .+..+|.                  .++.+..++|+...+...
T Consensus        74 ~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~  153 (233)
T PLN02367         74 YIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTES  153 (233)
T ss_pred             cEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCc
Confidence            35899999999999999999999999988764321  1111220                  111234677776544332


Q ss_pred             CC--C-CC--CCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCC
Q 029305           72 LP--K-AG--KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL  140 (195)
Q Consensus        72 ~~--~-~~--~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~  140 (195)
                      .+  . ..  .....|+.|+||.|+|+++++++|+++|+++...+.. + ...+.+|++|||||.|||++....
T Consensus       154 ~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~-g-~~~riaFIkDPDGn~IEL~e~~~~  225 (233)
T PLN02367        154 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPND-G-KMKGIAFIKDPDGYWIEIFDLKTI  225 (233)
T ss_pred             cccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCcc-C-CceEEEEEECCCCCEEEEEecccc
Confidence            11  0 10  0122589999999999999999999999999876632 2 224678999999999999997553

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.79  E-value=3e-18  Score=125.56  Aligned_cols=119  Identities=28%  Similarity=0.481  Sum_probs=86.3

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      |+.+|+||.|.|+|++++++||+++|||++..+.+    ..++ +...+..+.+....   ..+. . ....+..|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~~-~~~~g~~l~l~~~~---~~~~-~-~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR----KTAY-FDLNGLWIALNEEK---DIPR-N-EIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC----eeEE-EecCCeEEEeeccC---CCCC-c-cCCCCeeEEEEE
Confidence            46789999999999999999999999999986643    1222 22223333332211   1111 1 234567899999


Q ss_pred             eC--CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           90 CE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        90 v~--dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ++  ++++++++|+++|+++...+... ..+.+.+||.|||||.|||.+...
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~-~~~~~~~~~~DPdGn~iEl~~~~~  121 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERD-ERDKKSIYFTDPDGHKFEFHTGTL  121 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCcccc-CCCceEEEEECCCCCEEEEEeCCH
Confidence            98  99999999999999987654332 224589999999999999998643

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=4.3e-18  Score=118.55  Aligned_cols=114  Identities=38%  Similarity=0.605  Sum_probs=84.5

Q ss_pred             cceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCCH
Q 029305           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENM   93 (195)
Q Consensus        14 i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~dl   93 (195)
                      |+|+.|.|+|++++.+||+++||++...+... .....|.....+..++++........   . ....+..|++|.++|+
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~-~~~~~~~~~~~~~~i~l~~~~~~~~~---~-~~~~~~~~~~~~v~d~   75 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPF-LFPGAWLYAGDGPQLHLIEEDPPDAL---P-EGPGRDDHIAFRVDDL   75 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCC-CCCceEEEeCCCcEEEEEecCCCccc---c-CCCcccceEEEEeCCH
Confidence            68999999999999999999999998765432 12334412222235777655433211   1 3345678999999999


Q ss_pred             HHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEE
Q 029305           94 AIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI  134 (195)
Q Consensus        94 ~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi  134 (195)
                      +++.++++++|+++...+..  ..+.+.+||.|||||.|||
T Consensus        76 ~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          76 DAFRARLKAAGVPYTESDVP--GDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHcCCCcccccCC--CCCccEEEEECCCCCEEeC
Confidence            99999999999998876643  2345789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.79  E-value=4.7e-18  Score=121.33  Aligned_cols=115  Identities=17%  Similarity=0.220  Sum_probs=80.4

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEee-cCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFN-YGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      +.+|+|+.|.|+|+++|.+||+++|||++..+...   ...+ +.. .+...+.+....         ....+..|++|.
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~---~~~~-~~~~~~~~~~~~~l~~---------~~~~~~~hiaf~   68 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDDQ---GRVY-LKAWDEFDHHSIVLRE---------ADTAGLDFMGFK   68 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecCC---ceEE-EEccCCCcccEEEecc---------CCCCCeeEEEEE
Confidence            57899999999999999999999999998766421   1222 211 111111111110         123467899999


Q ss_pred             eC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           90 CE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        90 v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      ++   +++++.++|+++|+++...+........+.+||.|||||.||++...
T Consensus        69 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          69 VLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             eCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            98   89999999999999987644221111236899999999999998753

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.78  E-value=5.4e-18  Score=120.95  Aligned_cols=114  Identities=24%  Similarity=0.309  Sum_probs=81.8

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      |.+++|+|+.|.|+|+++|.+||+++|||++..+.+    ...| +...+ ...+.+....         ....++.|++
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~----~~~~-l~~~~~~~~~~~~l~~---------~~~~~~~h~a   67 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG----QSVY-LRAWGDYEHHSLKLTE---------SPEAGLGHIA   67 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC----CeEE-EEeccCCCccEEEEee---------CCCCceEEEE
Confidence            568899999999999999999999999999987654    1233 21112 1122221110         2235789999


Q ss_pred             EEeC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           88 FQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        88 f~v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      |.++   +++++.++|+++|+++...+... + ++..+||+|||||.||++...
T Consensus        68 f~v~~~~~v~~~~~~l~~~G~~~~~~~~~~-~-~~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          68 WRASSPEALERRVAALEASGLGIGWIEGDP-G-HGKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCccccccCCC-C-CcceEEEECCCCCEEEEEEec
Confidence            9998   68899999999999875332111 2 236899999999999999754

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.78  E-value=5.8e-18  Score=121.65  Aligned_cols=113  Identities=19%  Similarity=0.299  Sum_probs=81.1

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      .++.+|+||.|.|+|+++|.+||+++|||++..+.+    ...|  +..+...+.+.....        .  ++..|++|
T Consensus         2 ~~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~----~~~~--l~~~~~~~~i~l~~~--------~--~~~~~iaf   65 (124)
T cd08361           2 IELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA----KATY--FRSDARDHTLVYIEG--------D--PAEQASGF   65 (124)
T ss_pred             ceEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC----CeEE--EEcCCccEEEEEEeC--------C--CceEEEEE
Confidence            568899999999999999999999999999876543    2344  322212111111111        1  34578999


Q ss_pred             EeCC---HHHHHHHHHhCCCeEeccceecC--CcceEEEEEECCCCCEEEEEec
Q 029305           89 QCEN---MAIVERRLKEMKIDYVKSRVEEG--GINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        89 ~v~d---l~~~~~~l~~~gv~~~~~~~~~~--~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      .|++   ++++.++|+++|+++...+....  ..+.+.+||.|||||.||++..
T Consensus        66 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~  119 (124)
T cd08361          66 ELRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVR  119 (124)
T ss_pred             EECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEe
Confidence            9985   99999999999999876543211  1134678999999999999874

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.78  E-value=3.9e-18  Score=139.16  Aligned_cols=154  Identities=14%  Similarity=0.175  Sum_probs=104.5

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      +.+|+||.|.|+|+++|++||+++|||+...+.+    .+.+ ++..+ .+..+.....+          ..++.|++|.
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~----~~~~-~~~~~~~~~~~~l~~~~----------~~~~~~~~f~   65 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE----NDAL-YLRLDSRAHRIAVHPGE----------SDDLAYAGWE   65 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC----CceE-EEEcCCCceEEEEEECC----------cCCeeeEeee
Confidence            4689999999999999999999999999876533    2332 22332 22223222211          1357799999


Q ss_pred             eCC---HHHHHHHHHhCCCeEeccceec--CCcceEEEEEECCCCCEEEEEecCCCC-CCCCCCcchhhcccccccchhh
Q 029305           90 CEN---MAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCDVLP-VVPLAGDAVRIRSCTSTVNCNF  163 (195)
Q Consensus        90 v~d---l~~~~~~l~~~gv~~~~~~~~~--~~~~~~~~~~~DPdGn~iEi~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~  163 (195)
                      |++   ++++.++|++.|+++...+...  .....+.++|.|||||.|||+...... ..|+..+        .+.  .+
T Consensus        66 V~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~--------~~~--~~  135 (286)
T TIGR03213        66 VADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGAVEDFEKPFVSP--------RAV--SG  135 (286)
T ss_pred             eCCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcccccCCCCCCCC--------CCC--Cc
Confidence            997   8999999999999987654211  112347899999999999999864422 1111110        000  00


Q ss_pred             hhhhhhhcCCCCCCCcccccccccccccc
Q 029305          164 HQQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                       .+.  .+..|.|+.+.++|++.+.+||.
T Consensus       136 -~~~--~~~~l~Hv~l~v~Dle~s~~FY~  161 (286)
T TIGR03213       136 -FVT--GDQGLGHIVLRVPDVDAALAFYT  161 (286)
T ss_pred             -ccc--CCccccEEEEEcCCHHHHHHHHH
Confidence             111  25679999999999999999994

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.78  E-value=9.1e-18  Score=119.80  Aligned_cols=113  Identities=18%  Similarity=0.156  Sum_probs=80.7

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeC
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   91 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~   91 (195)
                      ++|+||+|.|+|+++|.+||+++|||++..+...   ...| +...+....+.....          ...+..|++|.++
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~---~~~~-~~~~~~~~~~~l~~~----------~~~~~~~~~f~v~   66 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPED---GALY-LRMDDRAWRIAVHPG----------EADDLAYAGWEVA   66 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCCC---CeEE-EEccCCceEEEEEeC----------CCCceeEEEEEEC
Confidence            4689999999999999999999999998766321   2333 222223333332221          1245789999997


Q ss_pred             ---CHHHHHHHHHhCCCeEeccceec--CCcceEEEEEECCCCCEEEEEecC
Q 029305           92 ---NMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        92 ---dl~~~~~~l~~~gv~~~~~~~~~--~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                         ++++++++|+++|+++...+...  ...+.+.+||+|||||.||++...
T Consensus        67 ~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          67 DEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence               58899999999999987644211  111337899999999999999864

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=1e-17  Score=119.32  Aligned_cols=117  Identities=22%  Similarity=0.264  Sum_probs=80.8

Q ss_pred             ccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCC
Q 029305           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN   92 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~d   92 (195)
                      ++.++.|.|+|+++|.+||+++|||++....+     ..+ .+..+..+++............ .....+..|++|.|+|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~-----~~~-~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~l~~~v~d   74 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG-----ENV-TFEGGFALQEGYSWLEGISKAD-IIEKSNNFELYFEEED   74 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC-----ceE-EEeccceeccchhhhccCCccc-ccccCCceEEEEEehh
Confidence            57899999999999999999999999875432     112 3333333322111100000110 1233456899999999


Q ss_pred             HHHHHHHHHhCCC-eEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           93 MAIVERRLKEMKI-DYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        93 l~~~~~~l~~~gv-~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +++++++|+++|. ++..++. ...++.+.+||+|||||.|||.+.
T Consensus        75 vd~~~~~l~~~g~~~~~~~~~-~~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          75 FDAFLDKLKRYDNIEYVHPIK-EHPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             hHHHHHHHHhcCCcEEecCcc-cCCCccEEEEEECCCCCEEEEecc
Confidence            9999999999985 6766653 344566899999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.77  E-value=1.3e-17  Score=118.32  Aligned_cols=116  Identities=27%  Similarity=0.351  Sum_probs=81.7

Q ss_pred             cceEEEEcCCHHHHHHHHHhccCCeEeecCCCC--CCCccEEEeec---CcEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--DFDGACRLFNY---GMGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus        14 i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~---g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      ++||.|.|+|++++.+||+++|||++..+....  +...+|.....   +..+++...... ..+.   ....+..|++|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~-~~~~---~~~~~~~~i~~   76 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGT-EEPY---DNGNGFGHLAF   76 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCC-CCCc---CCCCCeEEEEE
Confidence            579999999999999999999999987653211  11222311111   234544432221 1111   23347889999


Q ss_pred             EeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEE
Q 029305           89 QCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  135 (195)
Q Consensus        89 ~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~  135 (195)
                      .++|+++++++|+++|+++...+...+  +.+.+||.|||||.|||+
T Consensus        77 ~v~did~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          77 AVDDVYAACERLEEMGVEVTKPPGDGG--MKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             EeCCHHHHHHHHHHCCCEEeeCCccCC--CceEEEEECCCCCEEEeC
Confidence            999999999999999999988764432  346889999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.77  E-value=1.6e-17  Score=120.87  Aligned_cols=118  Identities=21%  Similarity=0.142  Sum_probs=80.8

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeC
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   91 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~   91 (195)
                      ++|+||.|.|+|+++|.+||+++|||++..+...   ...|.....+...+.+......       ....++.|+||.|+
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~~---~~~~~~~~~~~~~~~i~l~~~~-------~~~~g~~hiaf~v~   71 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFKG---RGAFLRAAGGGDHHNLFLIKTP-------APMAGFHHAAFEVG   71 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEecC---cEEEEECCCCCCCcEEEEecCC-------CCCCcceEEEEEeC
Confidence            5789999999999999999999999998765431   2344112111222222221110       11367899999999


Q ss_pred             CHHHHH---HHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           92 NMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        92 dl~~~~---~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      |++++.   ++|.++|+++...+......+...+||.|||||.|||.....
T Consensus        72 d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~  122 (134)
T cd08360          72 DIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMD  122 (134)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccc
Confidence            888776   599999999875442222112367999999999999997544

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.77  E-value=1.8e-17  Score=118.68  Aligned_cols=112  Identities=25%  Similarity=0.377  Sum_probs=81.5

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEe
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   90 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v   90 (195)
                      ..+++|+.|.|+|+++|++||+++||++.....+.    ..+..+..+..+.+...           ....+..|++|.+
T Consensus         2 ~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~l~~~~~-----------~~~~~~~h~a~~v   66 (123)
T cd08351           2 TVTLNHTIVPARDREASAEFYAEILGLPWAKPFGP----FAVVKLDNGVSLDFAQP-----------DGEIPPQHYAFLV   66 (123)
T ss_pred             cceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccCC----EEEEEcCCCcEEEEecC-----------CCCCCcceEEEEe
Confidence            36789999999999999999999999998764321    12212223333433321           1112467999999


Q ss_pred             C--CHHHHHHHHHhCCCeEeccceec------CCcceEEEEEECCCCCEEEEEec
Q 029305           91 E--NMAIVERRLKEMKIDYVKSRVEE------GGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        91 ~--dl~~~~~~l~~~gv~~~~~~~~~------~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +  |+++++++|+++|+++...+...      ..++.+.+||.|||||.|||++.
T Consensus        67 ~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          67 SEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             CHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence            7  69999999999999986654321      12356899999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=3e-17  Score=117.81  Aligned_cols=119  Identities=25%  Similarity=0.389  Sum_probs=87.8

Q ss_pred             ccceEEEEcCCHHHHHHHHHhcc---CCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           13 SLNHISLVCRSVEASLDFYQNVL---GFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~L---G~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      +|+||.|.|+|++++.+||+++|   ||++..+.+.   ...|.....+..+.++........  .......+..|+||.
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~---~~~~~~~~~~~~i~l~~~~~~~~~--~~~~~~~g~~hia~~   75 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED---GRSWRAGDGGTYLVLQQADGESAG--RHDRRNPGLHHLAFR   75 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc---CceEEecCCceEEEEEecccCCCc--ccccCCcCeeEEEEE
Confidence            58999999999999999999999   9998876431   234412224456666655443221  111345678999999


Q ss_pred             eC---CHHHHHHHHHhCCCeEeccceec--CCcceEEEEEECCCCCEEEEEe
Q 029305           90 CE---NMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        90 v~---dl~~~~~~l~~~gv~~~~~~~~~--~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      |+   ++++++++|+++|+++...+...  +..+.+.+||.|||||.|||+.
T Consensus        76 v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          76 APSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence            97   58999999999999998876431  2224589999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.77  E-value=2e-17  Score=116.85  Aligned_cols=110  Identities=15%  Similarity=0.201  Sum_probs=80.9

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEe
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   90 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v   90 (195)
                      +++|+|+.|.|+|+++|.+||++ |||++..+.+    ...| +...+...+++....         ...+++.|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~----~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD----DELY-YRGYGTDPFVYVARK---------GEKARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC----CeEE-EecCCCccEEEEccc---------CCcCcccEEEEEE
Confidence            46899999999999999999999 9999876643    2344 322232333332221         1124678999999


Q ss_pred             CCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           91 ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        91 ~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +|.+++.+.+++.|++....+.  ...+.+.+||.|||||.|||+..
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLE--APGGGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCC--CCCCceEEEEECCCCCEEEEEec
Confidence            9999999999999998765432  12234789999999999999985

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.77  E-value=6.7e-18  Score=120.92  Aligned_cols=124  Identities=16%  Similarity=0.243  Sum_probs=83.4

Q ss_pred             ccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec-CcEEEEeeeCCCCCC-CCCCCCCCCCceEEEEEe
Q 029305           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY-GMGIHLLKSEEPDNL-PKAGKNINPKDNHISFQC   90 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~~ll~~~~~~~~-~~~~~~~~~g~~Hiaf~v   90 (195)
                      +|+|+.|.|+|++++.+||+++|||+........+....+..+.. +..++|+........ .........+..|+||.|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v   80 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEV   80 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEc
Confidence            479999999999999999999999998754211111112223333 356777653222111 100002245788999999


Q ss_pred             CCHHHHHHHHHhCCCeEeccceecCCcceEEEEE--ECCCCCEEEEEe
Q 029305           91 ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFF--HDPDGSMIEICN  136 (195)
Q Consensus        91 ~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~--~DPdGn~iEi~~  136 (195)
                      +|++++.++|+++|+++..++...+.++.+.+|+  +||||+.||+.+
T Consensus        81 ~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        81 DDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            9999999999999999876422223234456677  799999999974

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.76  E-value=2.4e-17  Score=123.82  Aligned_cols=119  Identities=24%  Similarity=0.308  Sum_probs=77.7

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEE-EeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEe
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACR-LFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   90 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v   90 (195)
                      ++|+||.|.|+|+++|++||+++|||++.......+ ...+. .+..+...+.+....         ...+++.|+||.|
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~-~~~~~~~l~~~~~~~~i~l~~---------~~~~~~~Hiaf~v   71 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDD-GTTWAAWLHRKGGVHDTALTG---------GNGPRLHHVAFWV   71 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCC-CcEEEEEEecCCCcceEEEec---------CCCCceeEEEEEc
Confidence            578999999999999999999999999865432110 11111 122221222111110         2235789999999


Q ss_pred             CC---HHHHHHHHHhCCCeE--eccceecCCcceEEEEEECCCCCEEEEEecCCC
Q 029305           91 EN---MAIVERRLKEMKIDY--VKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL  140 (195)
Q Consensus        91 ~d---l~~~~~~l~~~gv~~--~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~  140 (195)
                      ++   ++++.++|+++|+..  ...+...+..+...+||.|||||.||++.....
T Consensus        72 ~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~~~  126 (161)
T cd07256          72 PEPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGDYY  126 (161)
T ss_pred             CCHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecCce
Confidence            85   777888999999863  222222221234679999999999999986543

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.76  E-value=4.5e-17  Score=114.62  Aligned_cols=112  Identities=18%  Similarity=0.225  Sum_probs=83.6

Q ss_pred             cceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC--cEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeC
Q 029305           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   91 (195)
Q Consensus        14 i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g--~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~   91 (195)
                      +.|+.|.|+|++++++||+++|||++......   ...|..+..+  ....++......       ...++..|++|.++
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~f~v~   70 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGDG---GGDYAVFSTGGGAVGGLMKAPEPA-------AGSPPGWLVYFAVD   70 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccCC---CCceEEEEeCCccEEEEecCCCCC-------CCCCCeEEEEEEeC
Confidence            47999999999999999999999999766531   1233344444  234444433221       12345779999999


Q ss_pred             CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           92 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        92 dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      |+++++++|+++|+++..++.... ++.+.+|+.|||||.|||++
T Consensus        71 di~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          71 DVDAAAARVEAAGGKVLVPPTDIP-GVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             CHHHHHHHHHHCCCEEEeCCcccC-CcEEEEEEECCCCCEEEeEC
Confidence            999999999999999987764333 34589999999999999974

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>PRK06724 hypothetical protein; Provisional

Probab=99.76  E-value=2.7e-17  Score=119.13  Aligned_cols=112  Identities=21%  Similarity=0.366  Sum_probs=79.0

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhcc---CCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVL---GFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNH   85 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~L---G~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~H   85 (195)
                      +..+|+||.|.|+|+++|.+||+++|   |++....         + .+..| ..+.+.....  ..     ....|..|
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~---------~-~~~~g~~~l~l~~~~~--~~-----~~~~g~~h   66 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNE---------V-AYSTGESEIYFKEVDE--EI-----VRTLGPRH   66 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeee---------E-eeeCCCeeEEEecCCc--cc-----cCCCCcee
Confidence            35679999999999999999999976   5554321         0 11112 2233322111  11     12357889


Q ss_pred             EEEEe---CCHHHHHHHHHhCCCeEeccceecC--CcceEEEEEECCCCCEEEEEecC
Q 029305           86 ISFQC---ENMAIVERRLKEMKIDYVKSRVEEG--GINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        86 iaf~v---~dl~~~~~~l~~~gv~~~~~~~~~~--~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      +||.|   ++++++.++|+++|+++...+....  +++.+.+||.|||||.||+...+
T Consensus        67 ~af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         67 ICYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             EEEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            99998   4899999999999999876664322  34568999999999999998753

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.76  E-value=2.4e-17  Score=116.94  Aligned_cols=114  Identities=18%  Similarity=0.246  Sum_probs=83.2

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEe
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   90 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v   90 (195)
                      +.+|+|+.|.|+|++++++||+++|||+.....+    +..| +...+...+++....         ...++..|++|.+
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~~~~v   66 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GIVY-LRATGSEHHILRLRR---------SDRNRLDVVSFSV   66 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CEEE-EECCCCccEEEEecc---------CCCCCCceEEEEe
Confidence            4689999999999999999999999999876543    2233 222333333433221         1224578999999


Q ss_pred             C---CHHHHHHHHHhCCCeEecccee-cCCcceEEEEEECCCCCEEEEEecC
Q 029305           91 E---NMAIVERRLKEMKIDYVKSRVE-EGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        91 ~---dl~~~~~~l~~~gv~~~~~~~~-~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      +   ++++++++|+++|+++...+.. ...++.+.+||.||+||.|||+...
T Consensus        67 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          67 ASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence            5   7999999999999998766522 1223457899999999999999864

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.76  E-value=3.5e-17  Score=123.59  Aligned_cols=124  Identities=18%  Similarity=0.225  Sum_probs=83.1

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCC--CCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--DFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      |.+.+|+|+.|.|+|++++.+||+++|||++..+....  .....| +...+....+.......       ....++.|+
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~l~~~~~-------~~~~~~~hi   73 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAW-MSVSNKVHDVAYTRDPA-------GARGRLHHL   73 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEE-EeCCCCceeEEEecCCC-------CCCCCceEE
Confidence            57899999999999999999999999999987542211  011234 21112111121111110       122468999


Q ss_pred             EEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCC
Q 029305           87 SFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL  140 (195)
Q Consensus        87 af~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~  140 (195)
                      ||.|+|   +++++++|+++|+++...+...+......+|+.|||||.|||+.....
T Consensus        74 af~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~~  130 (166)
T cd09014          74 AYALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGGGGY  130 (166)
T ss_pred             EEECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEcCCc
Confidence            999985   557888999999998655533221133469999999999999997443

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>PRK10291 glyoxalase I; Provisional

Probab=99.76  E-value=2.5e-17  Score=118.90  Aligned_cols=117  Identities=22%  Similarity=0.303  Sum_probs=77.6

Q ss_pred             EEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-----cEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCC
Q 029305           18 SLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-----MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN   92 (195)
Q Consensus        18 ~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-----~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~d   92 (195)
                      .|.|+|+++|++||+++|||++..+....+....+.++..+     ..+++....   ... .. ..+.+..|+||.|+|
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~-~~-~~g~~~~hlaf~V~d   75 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW---GVD-KY-ELGTAYGHIALSVDN   75 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecC---CCC-CC-cCCCCeeEEEEEeCC
Confidence            37899999999999999999987654321111111122222     123332111   111 11 234578899999999


Q ss_pred             HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           93 MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        93 l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +++++++|+++|+++...+.+..+...+.+||.|||||.|||++..+
T Consensus        76 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         76 AAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             HHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            99999999999999876543222212356889999999999999653

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.75  E-value=4.4e-17  Score=114.90  Aligned_cols=112  Identities=20%  Similarity=0.286  Sum_probs=82.6

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeC
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   91 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~   91 (195)
                      ++|+|+.|.|+|++++.+||+++|||++..+.+    ...|.....+....+.....          ...+..|++|.|+
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~----------~~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA----GSVYLRCSEDDHHSLVLTEG----------DEPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC----CeEEEecCCCCcEEEEEEeC----------CCCCceeEEEEcC
Confidence            468999999999999999999999999987654    23441222122333322221          1245789999998


Q ss_pred             ---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           92 ---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        92 ---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                         ++++++++|+++|+++...+.... .+.+.+||.||+||.+|++...
T Consensus        67 ~~~~v~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~DP~G~~ie~~~~~  115 (117)
T cd07240          67 SEEDLEALAAHLEAAGVAPEEASDPEP-GVGRGLRFQDPDGHLLELFVEA  115 (117)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCccCC-CCceEEEEECCCCCEEEEEEcc
Confidence               689999999999999877663222 2458999999999999999763

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.75  E-value=1.5e-17  Score=123.85  Aligned_cols=121  Identities=18%  Similarity=0.149  Sum_probs=79.0

Q ss_pred             ccceEEEEcCCHHHHHHHHHhccCCeEeecCCC---CCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS---FDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~---~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      +|+||.|.|+|+++|++||+++|||++..+...   ......|  +..+.+-.++..   ....... ...+++.|+||.
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~---~~~~l~~-~~~~g~~Hiaf~   74 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAF--LRLDRGEEYVDH---HTLALAQ-GPESGVHHAAFE   74 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEE--EecCCCCCcccc---hHHHHhc-CCCCceeEEEEE
Confidence            479999999999999999999999998754211   0011222  222111000000   0000000 224689999999


Q ss_pred             eCCHHHHH---HHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           90 CENMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        90 v~dl~~~~---~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      |+|++++.   ++|+++|+++...+..........+|+.|||||.|||+....
T Consensus        75 v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~  127 (153)
T cd07257          75 VHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGD  127 (153)
T ss_pred             cCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCce
Confidence            99999986   999999999876542221112246799999999999998654

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.75  E-value=3.1e-17  Score=119.04  Aligned_cols=115  Identities=23%  Similarity=0.401  Sum_probs=82.8

Q ss_pred             cceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeC--
Q 029305           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE--   91 (195)
Q Consensus        14 i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~--   91 (195)
                      |+||.|.|+|++++.+||+++|||++..+...    ..+ +...+..+.+....   ..+. . ....+..|+||.++  
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~~----~~~-~~~~~~~l~l~~~~---~~~~-~-~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGEK----TAY-FTIGGTWLALNEEP---DIPR-N-EIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCCc----cce-EeeCceEEEEEccC---CCCc-C-CcCccceEEEEEecHH
Confidence            68999999999999999999999998765331    222 22223444443222   1121 1 23457899999998  


Q ss_pred             CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           92 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        92 dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ++++++++|++.|+++...+... ..+.+.+||.|||||.|||.....
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~-~~~~~~~~f~DPdG~~iEl~~~~~  117 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRD-VRDRKSIYFTDPDGHKLEVHTGTL  117 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccc-cCcceEEEEECCCCCEEEEecCcH
Confidence            59999999999999986544322 224589999999999999998654

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=4.5e-17  Score=114.59  Aligned_cols=117  Identities=16%  Similarity=0.174  Sum_probs=82.0

Q ss_pred             eEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec-Cc-EEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCCH
Q 029305           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY-GM-GIHLLKSEEPDNLPKAGKNINPKDNHISFQCENM   93 (195)
Q Consensus        16 hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~-~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~dl   93 (195)
                      ||.|.|.|++++.+||+++|||++..+.... ....|..+.. +. ...+............. ....+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMG-GGFRWVTVAPPGSPETSLVLAPPANPAAMSG-LQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccC-CCcEEEEEeCCCCCeeEEEEeCCCCcccccc-ccCCCceEEEEEehHH
Confidence            8999999999999999999999998765311 1223423332 22 33332222221111111 3456788999999999


Q ss_pred             HHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           94 AIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        94 ~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      ++++++|+++|+++...+...  .+.+.+|+.|||||.|||++
T Consensus        79 ~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEELKARGVEFSEEPREM--PYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHhCCCEEeeccccC--CCceEEEEECCCCCEEEEeC
Confidence            999999999999998776322  23489999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.75  E-value=3e-17  Score=120.79  Aligned_cols=112  Identities=17%  Similarity=0.121  Sum_probs=80.5

Q ss_pred             ceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCC-
Q 029305           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN-   92 (195)
Q Consensus        15 ~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~d-   92 (195)
                      +||.|.|+|++++.+||+++|||++..+.+.   ..+| +...+ ...+.+....         ....+++|+||.|+| 
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~---~~~~-l~~~~~~~~h~~~~~~---------~~~~gl~Hiaf~v~~~   67 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED---RIVF-MRCHPNPFHHTFAVGP---------ASSSHFHHVNFMVTDI   67 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC---EEEE-EEcCCCCCcceeeecc---------CCCCceEEEEEECCCH
Confidence            5999999999999999999999998776431   2233 22222 2223332110         234689999999985 


Q ss_pred             --HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           93 --MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        93 --l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                        ++++.++|+++|+++...+......+.+.+||+||||+.||++....
T Consensus        68 ~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  116 (141)
T cd07258          68 DDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGME  116 (141)
T ss_pred             HHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcc
Confidence              55779999999999876654333234578999999999999998654

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.74  E-value=6.6e-17  Score=115.11  Aligned_cols=117  Identities=21%  Similarity=0.379  Sum_probs=82.7

Q ss_pred             ccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCC-CccEEEee-----cCcEEEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF-DGACRLFN-----YGMGIHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~-~~~~~~~~-----~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      +|+||.|.|.|++++.+||+++|||+...+....+. ...+..+.     .+..+.++....... + .. ....++.|+
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~-~~-~~~~~~~hi   77 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGP-K-GR-RGPGQIHHI   77 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCC-C-CC-CCCCcEEEE
Confidence            478999999999999999999999998776432211 11221232     234566665433211 1 11 334568999


Q ss_pred             EEEeC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEE
Q 029305           87 SFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  135 (195)
Q Consensus        87 af~v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~  135 (195)
                      ||.++   ++++++++++++|+++...+..   .+.+.+||+|||||.|||+
T Consensus        78 ~f~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          78 AFSVPSEASLDAWRERLRAAGVPVSGVVDH---FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCcccceEee---cceEEEEEECCCCCEEEeC
Confidence            99999   5799999999999998764432   2458999999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.74  E-value=4.8e-17  Score=115.74  Aligned_cols=113  Identities=22%  Similarity=0.242  Sum_probs=80.4

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec--CcEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY--GMGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--g~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      ++++|+|+.|.|+|++++.+||+++||+++..+.+    ...| +...  +....+....          ....+..|++
T Consensus         1 ~~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~hi~   65 (121)
T cd07266           1 NILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD----DRIY-LRGLEEFIHHSLVLTK----------APVAGLGHIA   65 (121)
T ss_pred             CcceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC----CeEE-EEecCCCceEEEEEee----------CCCCceeEEE
Confidence            36789999999999999999999999999876543    1232 2111  1122222111          1224688999


Q ss_pred             EEeC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           88 FQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        88 f~v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      |.|.   ++++++++|+++|+++...+........+.+|+.|||||.||++..
T Consensus        66 ~~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          66 FRVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             EECCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            9995   7999999999999998764322211123789999999999999974

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.74  E-value=1.7e-17  Score=135.70  Aligned_cols=150  Identities=14%  Similarity=0.119  Sum_probs=103.6

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC--cEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g--~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      +|.+|+||.|.|+|++++++||+++|||++..+.+    ...| +...+  ....+....          ....++.|++
T Consensus         1 ~i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~----~~~~-~~~~~~~~~~~l~l~~----------~~~~~~~hia   65 (294)
T TIGR02295         1 NILRTGHVELRVTDLDKSREFYVDLLGFRETESDK----EYIY-LRGIEEFQHHSLVLTK----------APSAALSYIG   65 (294)
T ss_pred             CCceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC----CeEE-EeccCcCCceEEEeee----------CCCcCccEEE
Confidence            36889999999999999999999999999876643    1233 22111  111121111          1234688999


Q ss_pred             EEeC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccchhhh
Q 029305           88 FQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFH  164 (195)
Q Consensus        88 f~v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  164 (195)
                      |.|+   +++++.++|+++|+++...+..   .+.+.+||.|||||.|||+...... ...         . .+.+..  
T Consensus        66 f~v~~~~dl~~~~~~l~~~Gv~v~~~~~~---~~~~~~~~~DPdG~~iEl~~~~~~~-~~~---------~-~~~~~~--  129 (294)
T TIGR02295        66 FRVSKEEDLDKAADFFQKLGHPVRLVRDG---GQPEALRVEDPFGYPIEFYFEMEKV-ERL---------L-RRYHRH--  129 (294)
T ss_pred             EEeCCHHHHHHHHHHHHhcCCcEEeecCC---CCceEEEEECCCCCEEEEEEchhhc-ccc---------c-cccccc--
Confidence            9998   7899999999999998765422   2348999999999999999854321 000         0 011000  


Q ss_pred             hhhhhhcCCCCCCCcccccccccccccc
Q 029305          165 QQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                        ....+-.|.|+++.++|++.+.+||.
T Consensus       130 --~~~~~~~i~Hv~l~v~dl~~a~~Fy~  155 (294)
T TIGR02295       130 --RGVSPVRLDHFNVFVPDVQRALRFYK  155 (294)
T ss_pred             --CCccceeeeeEEEEeCCHHHHHHHHH
Confidence              01135579999999999999999994

The enzyme from Bacillus brevis contains manganese.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.74  E-value=1.5e-16  Score=115.26  Aligned_cols=121  Identities=27%  Similarity=0.379  Sum_probs=85.2

Q ss_pred             ccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC----cEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG----MGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      +|+||.|.|+|++++.+||+++|||++..+.+.    ..+..+..+    ..+.+........    . ....+..|++|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~~~l~l~~~~~~~~----~-~~~~~~~h~~f   71 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDPDEHHQIALITGRPAAP----P-PGPAGLNHIAF   71 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecCCCceEEEEEecCCCCC----C-CCCCCceEEEE
Confidence            479999999999999999999999998766431    122233322    2344443332211    1 33457889999


Q ss_pred             EeCCHH---HHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCC
Q 029305           89 QCENMA---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPL  145 (195)
Q Consensus        89 ~v~dl~---~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~  145 (195)
                      .|++++   +++++|.+.|+++.....  .+ +.+.+|+.|||||.|||+...+...|-.
T Consensus        72 ~v~~~~~v~~~~~~l~~~G~~~~~~~~--~~-~~~~~~~~DP~G~~ie~~~~~~~~~~~~  128 (134)
T cd08348          72 EVDSLDDLRDLYERLRAAGITPVWPVD--HG-NAWSIYFRDPDGNRLELFVDTPWYVAQA  128 (134)
T ss_pred             EeCCHHHHHHHHHHHHHCCCCccccCC--CC-ceeEEEEECCCCCEEEEEEcCCCChhhH
Confidence            999655   578999999999876542  22 2478999999999999998766555533

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.74  E-value=5.5e-17  Score=120.98  Aligned_cols=120  Identities=17%  Similarity=0.184  Sum_probs=80.3

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCC-C--CCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF-D--FDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~-~--~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      .++|+||.|.|+|++++.+||+++|||++..+.... +  ......++..+...+.+....       . ....++.|+|
T Consensus         7 ~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~-------~-~~~~g~~Hia   78 (154)
T cd07237           7 DQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAE-------G-PGPKRIHHLM   78 (154)
T ss_pred             CCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEc-------C-CCCceeEEEE
Confidence            467999999999999999999999999986542210 0  011111222221111111110       0 2235789999


Q ss_pred             EEeCCHH---HHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           88 FQCENMA---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        88 f~v~dl~---~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      |.|+|++   ++.++|+++|+++...+......+.+.+|+.|||||.|||+...
T Consensus        79 f~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~  132 (154)
T cd07237          79 LEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGG  132 (154)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCc
Confidence            9998654   68999999999998665332222457899999999999998753

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.73  E-value=9.7e-17  Score=112.63  Aligned_cols=109  Identities=26%  Similarity=0.442  Sum_probs=77.6

Q ss_pred             eEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeC--CH
Q 029305           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE--NM   93 (195)
Q Consensus        16 hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~--dl   93 (195)
                      ||.|.|+|++++.+||+++|||+...+.+    ...+ +...+..+.+....   ...    ....+..|++|.|+  ++
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~----~~~~-~~~~~~~l~~~~~~---~~~----~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS----KEAY-FELAGLWICLMEED---SLQ----GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC----ceeE-EEecCeEEEeccCC---CcC----CCCCCccEEEEEcCHHHH
Confidence            79999999999999999999999877654    1232 22223333322211   111    12346789999996  79


Q ss_pred             HHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           94 AIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        94 ~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      ++++++|+++|+++........ .+.+.+|+.|||||.|||+..
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQ-GEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccC-CCceEEEEECCCCCEEEEEeC
Confidence            9999999999999875432222 234899999999999999964

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=3e-16  Score=111.96  Aligned_cols=117  Identities=20%  Similarity=0.284  Sum_probs=80.7

Q ss_pred             cceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCC-----C-CCCCCCCCCCCceEE
Q 029305           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPD-----N-LPKAGKNINPKDNHI   86 (195)
Q Consensus        14 i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~-----~-~~~~~~~~~~g~~Hi   86 (195)
                      +.|+.|.|+|++++.+||+++|||+.....+.    ..|..+..+ ..+.+.......     . .+... ...++..|+
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   75 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHES----GDYGELETGETTLAFASHDLAESNLKGGFVKADP-AQPPAGFEI   75 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCC----CcEEEecCCcEEEEEEcccccccccccCccCCcc-ccCCCcEEE
Confidence            46999999999999999999999998754331    123233333 223332221100     0 01111 233455799


Q ss_pred             EEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           87 SFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        87 af~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      +|.|+|+++++++++++|+++..++.. ..++.+.++++|||||.|||++
T Consensus        76 ~~~v~di~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~~~~~~  124 (125)
T cd07264          76 AFVTDDVAAAFARAVEAGAVLVSEPKE-KPWGQTVAYVRDINGFLIELCS  124 (125)
T ss_pred             EEEcCCHHHHHHHHHHcCCEeccCCcc-CCCCcEEEEEECCCCCEEEEec
Confidence            999999999999999999998776633 3345578999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.73  E-value=1e-16  Score=114.42  Aligned_cols=109  Identities=26%  Similarity=0.409  Sum_probs=79.0

Q ss_pred             ccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeC-
Q 029305           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE-   91 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~-   91 (195)
                      +|+||.|.|+|++++.+||+++|||++....+    ...| +...+..+.+. ....  .     ...++..|++|.++ 
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~----~~~~-~~~~~~~~~l~-~~~~--~-----~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD----KGAY-LEAGDLWLCLS-VDAN--V-----GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC----CceE-EecCCEEEEEe-cCCC--C-----CCCCCeeeEEEEeCH
Confidence            57999999999999999999999999876544    1233 22222222222 1111  1     12346789999995 


Q ss_pred             -CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           92 -NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        92 -dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                       ++++++++|+++|+++...+.. .   .+.+||.|||||.|||+...
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~-~---~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTS-E---GDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCC-C---ccEEEEECCCCCEEEEEeCC
Confidence             8999999999999998665422 2   26899999999999999753

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.72  E-value=1.6e-16  Score=117.30  Aligned_cols=114  Identities=24%  Similarity=0.339  Sum_probs=79.6

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeC
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   91 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~   91 (195)
                      .+|+||.|.|+|++++.+||+++|||++..+.+.   ...|  +..+...+.+....         ...+++.|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~---~~~~--l~~~~~~~~~~l~~---------~~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLGD---QMAF--LRCNSDHHSIAIAR---------GPHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeCC---eEEE--EECCCCcceEEEcc---------CCCCceEEEEEECC
Confidence            4789999999999999999999999998755321   1233  33231111111111         12356889999999


Q ss_pred             CHHHHH---HHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           92 NMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        92 dl~~~~---~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +++++.   ++|+++|+++...+...+......+||.|||||.|||++...
T Consensus        69 d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          69 SIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             CHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence            877775   899999999876543322222356899999999999998643

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=1.7e-16  Score=113.09  Aligned_cols=115  Identities=20%  Similarity=0.310  Sum_probs=76.1

Q ss_pred             eEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEee-cCcEEEEeeeCCCCC--CCCCCCCCCCCceEEEE--Ee
Q 029305           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFN-YGMGIHLLKSEEPDN--LPKAGKNINPKDNHISF--QC   90 (195)
Q Consensus        16 hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~g~~~~ll~~~~~~~--~~~~~~~~~~g~~Hiaf--~v   90 (195)
                      ||.|.|+|+++|++||+++|||++.....      .|..+. .+..+.+........  ..........+..|++|  .+
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~   75 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE------TWVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSE   75 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC------CcccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeH
Confidence            89999999999999999999999876532      121222 233333322221101  01110122334678765  55


Q ss_pred             CCHHHHHHHHHhCCCeEeccceec-C--CcceEEEEEECCCCCEEEEEe
Q 029305           91 ENMAIVERRLKEMKIDYVKSRVEE-G--GINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        91 ~dl~~~~~~l~~~gv~~~~~~~~~-~--~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      +|+++++++|+++|+++...+... .  ..+.+.+||.|||||.|||..
T Consensus        76 ~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          76 EEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             HHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            699999999999999998765322 1  123588999999999999976

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.72  E-value=9.6e-17  Score=114.67  Aligned_cols=122  Identities=20%  Similarity=0.359  Sum_probs=84.3

Q ss_pred             cceEEEEcCCHHHHHHHHHhccCCeEeecCCCC-CCCccEEEee-cCcEEEEeeeCCCCCCCCC-CCCCCCCceEEEEEe
Q 029305           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF-DFDGACRLFN-YGMGIHLLKSEEPDNLPKA-GKNINPKDNHISFQC   90 (195)
Q Consensus        14 i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~-~g~~~~ll~~~~~~~~~~~-~~~~~~g~~Hiaf~v   90 (195)
                      |+||.|.|+|++++.+||+++|||+........ +....+..+. .+..+.+++.......... ......+..|++|.|
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v   80 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEV   80 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEe
Confidence            579999999999999999999999998764421 1111122333 3456777765433221110 013457899999999


Q ss_pred             CCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCC---CCEEEEEe
Q 029305           91 ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPD---GSMIEICN  136 (195)
Q Consensus        91 ~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPd---Gn~iEi~~  136 (195)
                      +|+++++++|+++|+++...+..... +++.+++.||+   |+.|||++
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~-~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          81 DDIDAALARLKAQGVRLLQEGPRIGA-GGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCeeeccCCCccC-CCCEEEEEecCCCceEEEEecC
Confidence            99999999999999999887642222 23455555555   99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.72  E-value=4.8e-17  Score=115.74  Aligned_cols=122  Identities=23%  Similarity=0.341  Sum_probs=82.0

Q ss_pred             ccceEEEEcCCHHHHHHHHHhccCCeEeecCCC-CCCCcc-EEEee-cCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS-FDFDGA-CRLFN-YGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~-~~~~~-~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      +|+||+|.|+|++++.+||+++|||++...... ...... ...+. .+..+.+.....+............+..|+++.
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~   80 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIAFL   80 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeeccccccccccccccccceeEEEE
Confidence            589999999999999999999999999887541 100111 11223 334566655543322211000000145677777


Q ss_pred             eC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEE
Q 029305           90 CE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI  134 (195)
Q Consensus        90 v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi  134 (195)
                      +.   |+++++++|++.|+++...+..........+|++|||||.|||
T Consensus        81 ~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   81 AFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             ESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             eccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            76   7888999999999999988755444344567899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.72  E-value=2.6e-16  Score=112.08  Aligned_cols=118  Identities=19%  Similarity=0.266  Sum_probs=77.5

Q ss_pred             cceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCC-CCCCCCCCCCceEEEEEeC-
Q 029305           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNL-PKAGKNINPKDNHISFQCE-   91 (195)
Q Consensus        14 i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~-~~~~~~~~~g~~Hiaf~v~-   91 (195)
                      ++||+|.|+|+++|++||+. |||++....+..  .........+..+.+......... +... ...++..|++|.+. 
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~~--~~~~~~~~~~~~l~l~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~   76 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADDE--PHVEAVLPGGVRLAWDTVESIRSFTPGWT-PTGGHRIALAFLCET   76 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCCC--CcEEEEeCCCEEEEEEcccceeeecCCCC-CCCCCcEEEEEEcCC
Confidence            57999999999999999975 999986544311  112101222333333222111000 1111 22345678999876 


Q ss_pred             --CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           92 --NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        92 --dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                        |+++++++|+++|+++..++. ...++.+.++|+|||||.|||+.
T Consensus        77 ~~dvd~~~~~l~~~G~~~~~~~~-~~~~g~~~~~~~DPdG~~iel~~  122 (122)
T cd07235          77 PAEVDALYAELVGAGYPGHKEPW-DAPWGQRYAIVKDPDGNLVDLFA  122 (122)
T ss_pred             HHHHHHHHHHHHHCCCCcCCCCc-cCCCCCEEEEEECCCCCEEEEeC
Confidence              899999999999999877653 33445678999999999999974

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=3.8e-16  Score=110.69  Aligned_cols=113  Identities=16%  Similarity=0.265  Sum_probs=79.3

Q ss_pred             eEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC---cEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCC
Q 029305           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG---MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN   92 (195)
Q Consensus        16 hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g---~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~d   92 (195)
                      +..|.|+|+++|.+||+++|||++....+      .+..+..+   ..+.+...... ..+.......+...|++|.|+|
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~~~~~v~d   76 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD------WYVSLRSPDGGVELAFMLPGHE-TVPAAQYQFQGQGLILNFEVDD   76 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC------cEEEEecCCCceEEEEccCCCC-CCcchhcccCCceEEEEEEECC
Confidence            67899999999999999999999986533      12233322   23334332221 1110111223334599999999


Q ss_pred             HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           93 MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        93 l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      +++++++|.++|+++..++.. ..++.+.++++|||||.|||++
T Consensus        77 id~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          77 VDAEYERLKAEGLPIVLPLRD-EPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             HHHHHHHHHhcCCCeeecccc-CCCcceEEEEECCCCCEEEEEC
Confidence            999999999999998766533 3445689999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=6.1e-16  Score=109.78  Aligned_cols=116  Identities=20%  Similarity=0.282  Sum_probs=81.5

Q ss_pred             cceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC--cEEEEeeeCCCCCCCC-CCCCCCCCceEEEEEe
Q 029305           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG--MGIHLLKSEEPDNLPK-AGKNINPKDNHISFQC   90 (195)
Q Consensus        14 i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g--~~~~ll~~~~~~~~~~-~~~~~~~g~~Hiaf~v   90 (195)
                      |.+|.|.|+|++++++||+++|||++..+.+     ..+..+..+  ..+.++.......... .......+..|++|.+
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~~-----~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v   75 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKED-----RRLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAI   75 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecCC-----CceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEc
Confidence            4689999999999999999999999987522     112223333  3344444332210000 0012345788999999


Q ss_pred             C--CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           91 E--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        91 ~--dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      +  +++++++++.++|+++...+.  ...+.+.+||.|||||.|||++
T Consensus        76 ~~~dl~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~DP~G~~ie~~~  121 (122)
T cd08354          76 PAEELAEWEAHLEAKGVAIESEVQ--WPRGGRSLYFRDPDGNLLELAT  121 (122)
T ss_pred             CHHHHHHHHHHHHhcCCceecccc--CCCCeeEEEEECCCCCEEEEec
Confidence            5  899999999999999876553  2334588999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=1.1e-15  Score=109.00  Aligned_cols=118  Identities=12%  Similarity=0.166  Sum_probs=80.5

Q ss_pred             EEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCCHHH
Q 029305           17 ISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAI   95 (195)
Q Consensus        17 v~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~dl~~   95 (195)
                      -.|.|+|++++.+||+++||+++..+....+....+..+..+ ..+.+........... ......+..|++|.|+|+++
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~v~d~d~   81 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASS-ARAGGAGTQGVYVVVDDVDA   81 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccc-cccCCCceEEEEEEECCHHH
Confidence            468899999999999999999998764211111112223333 3344433322211111 11334567899999999999


Q ss_pred             HHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           96 VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        96 ~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      ++++|+++|+++..++... .++.+.++++|||||.|+|.+
T Consensus        82 ~~~~l~~~G~~v~~~~~~~-~~g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          82 HYERARAAGAEILREPTDT-PYGSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHCCCEEeeCcccc-CCCcEEEEEECCCCCEEEEec
Confidence            9999999999998776433 345688999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=9.5e-16  Score=107.91  Aligned_cols=110  Identities=17%  Similarity=0.312  Sum_probs=78.9

Q ss_pred             EEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCC---H
Q 029305           17 ISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN---M   93 (195)
Q Consensus        17 v~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~d---l   93 (195)
                      +.|.|+|++++++||+++||+++....+.    ..+.....+..+.++......  + .. ....+..|++|.+++   +
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~--~-~~-~~~~~~~~~~~~v~~~~~~   73 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSPT----FALFVLGSGVKLGLWSRHTVE--P-AS-DATGGGSELAFMVDDGAAV   73 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCCc----eEEEEeCCCcEEEEeeccccC--C-CC-CCCCCceEEEEEcCCHHHH
Confidence            67999999999999999999998765331    111012234556665443221  1 11 335678899999985   8


Q ss_pred             HHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           94 AIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        94 ~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      +++++++.++|+++...+... +++ +.++|.|||||.|||+.
T Consensus        74 ~~~~~~~~~~g~~v~~~~~~~-~~g-~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          74 DALYAEWQAKGVKIIQEPTEM-DFG-YTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHHHHHHHHCCCeEecCcccc-CCc-cEEEEECCCCCEEEeeC
Confidence            899999999999998776433 333 68899999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=6.7e-16  Score=110.52  Aligned_cols=117  Identities=18%  Similarity=0.200  Sum_probs=78.0

Q ss_pred             ceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCC--CCCCCCceEEEEEeC-
Q 029305           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAG--KNINPKDNHISFQCE-   91 (195)
Q Consensus        15 ~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~--~~~~~g~~Hiaf~v~-   91 (195)
                      ..|.|.|+|+++|++||++ |||+...+....  ...+.....+..+.+.............  .....+..|++|.|+ 
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~--~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~v~~   78 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFSDE--KAACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLSADS   78 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccCCC--CeEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEeCCC
Confidence            4789999999999999987 999987543321  2233122223455554432110000000  012345679999998 


Q ss_pred             --CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           92 --NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        92 --dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                        ++++++++++++|+++..++....  +.+.+||+|||||.|||+.
T Consensus        79 ~~~vd~~~~~l~~~G~~i~~~p~~~~--~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          79 REEVDELVEKALAAGGKEFREPQDHG--FMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             HHHHHHHHHHHHHCCCcccCCcccCC--ceEEEEEECCCCCEEEEEE
Confidence              588999999999999987664333  2468899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.2e-15  Score=108.89  Aligned_cols=111  Identities=19%  Similarity=0.275  Sum_probs=77.8

Q ss_pred             cceEEEEcCCHHHHHHHHHhc---cCCeEeecCCCCCCCccEEEeec---CcEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           14 LNHISLVCRSVEASLDFYQNV---LGFFPIRRPGSFDFDGACRLFNY---GMGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        14 i~hv~l~v~dl~~s~~FY~~~---LG~~~~~~~~~~~~~~~~~~~~~---g~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      |+||.|.|+|+++|++||+++   ||++...+..    + .+..+..   +..+.+......  .+    ....+..|++
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~----~-~~~~~~~~~~~~~~~l~~~~~~--~~----~~~~~~~hi~   69 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG----P-GAVGYGKGGGGPDFWVTKPFDG--EP----ATAGNGTHVA   69 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC----C-ceeEeccCCCCceEEEeccccC--CC----CCCCCceEEE
Confidence            589999999999999999998   6999876541    1 1212332   234554432211  11    1223457999


Q ss_pred             EEeCC---HHHHHHHHHhCCCeEeccceecC--CcceEEEEEECCCCCEEEEE
Q 029305           88 FQCEN---MAIVERRLKEMKIDYVKSRVEEG--GINVDQLFFHDPDGSMIEIC  135 (195)
Q Consensus        88 f~v~d---l~~~~~~l~~~gv~~~~~~~~~~--~~~~~~~~~~DPdGn~iEi~  135 (195)
                      |.|++   ++++++++.+.|+.+...+....  +.+.+.+||.|||||.|||+
T Consensus        70 f~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          70 FAAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             EECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            99996   78899999999999877653322  23446899999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.4e-15  Score=108.02  Aligned_cols=111  Identities=22%  Similarity=0.327  Sum_probs=78.6

Q ss_pred             ceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCC--
Q 029305           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN--   92 (195)
Q Consensus        15 ~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~d--   92 (195)
                      .|+.|.|+|++++.+||+++||++...+.+.   ...| .. .+..+.+.....+.       ...++..|++|.+++  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~---~~~~-~~-~~~~~~~~~~~~~~-------~~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRDD---YAKF-LL-EDPRLNFVLNERPG-------APGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccCC---eeEE-Ee-cCCceEEEEecCCC-------CCCCCeeEEEEEeCCHH
Confidence            3999999999999999999999998765431   1233 22 22334433222111       111578899999986  


Q ss_pred             -HHHHHHHHHhCCCeEeccceecC-CcceEEEEEECCCCCEEEEEec
Q 029305           93 -MAIVERRLKEMKIDYVKSRVEEG-GINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        93 -l~~~~~~l~~~gv~~~~~~~~~~-~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                       +++++++|.++|+++...+.... +...+.+|++|||||.|||+..
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  117 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVT  117 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEe
Confidence             88899999999999877652221 1124689999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=2.1e-15  Score=106.92  Aligned_cols=116  Identities=16%  Similarity=0.060  Sum_probs=80.7

Q ss_pred             EEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCCHHH
Q 029305           17 ISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAI   95 (195)
Q Consensus        17 v~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~dl~~   95 (195)
                      +.|.|+|++++.+||+++||+++..+....+....+..+..+ ..+.+...... .. .. .....+..|++|.|+|+++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~-~~-~~~~~~~~~~~~~v~d~~~   81 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPE-HG-SP-ASWGGTPVSLHLYVEDVDA   81 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcc-cC-CC-CCCCCceEEEEEEeCCHHH
Confidence            568899999999999999999998764311111123233333 33444322211 11 11 1234567899999999999


Q ss_pred             HHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           96 VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        96 ~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      +++++.+.|+++..++.. ..++.+.+++.|||||.|||++
T Consensus        82 ~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          82 TFARAVAAGATSVMPPAD-QFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHHCCCeEecCccc-ccccceEEEEECCCCCEEEEec
Confidence            999999999998877642 3456689999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.69  E-value=1e-15  Score=106.47  Aligned_cols=103  Identities=29%  Similarity=0.507  Sum_probs=75.5

Q ss_pred             EEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcE-----EEEeeeCCCCCCCCCCCCCCCCceEEEEEeCCH
Q 029305           19 LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG-----IHLLKSEEPDNLPKAGKNINPKDNHISFQCENM   93 (195)
Q Consensus        19 l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~-----~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~dl   93 (195)
                      |.|+|++++++||+++|||++....+.     . ..+..+..     ..+......       .....+..|++|.|+|+
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~v~dv   67 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDPD-----Y-VDFSLGFRFHDGVIEFLQFPDP-------PGPPGGGFHLCFEVEDV   67 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEETS-----E-EEEEETEEEEEEEEEEEEEESS-------SSSSSSEEEEEEEESHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCCC-----e-EEEEeccchhhhhHHHccCCcc-------ccCCCceeEEEEEEcCH
Confidence            689999999999999999999985431     1 13333322     233333211       13456789999999999


Q ss_pred             HHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEE
Q 029305           94 AIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  135 (195)
Q Consensus        94 ~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~  135 (195)
                      ++++++++++|+++...+... .++.+.+++.|||||.|||+
T Consensus        68 ~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   68 DALYERLKELGAEIVTEPRDD-PWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHHHHHHTTSEEEEEEEEE-TTSEEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHCCCeEeeCCEEc-CCCeEEEEEECCCCCEEEeC
Confidence            999999999999988776543 33568999999999999996

...

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.69  E-value=8.9e-16  Score=108.09  Aligned_cols=107  Identities=21%  Similarity=0.349  Sum_probs=73.0

Q ss_pred             ccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEE--Ee
Q 029305           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISF--QC   90 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf--~v   90 (195)
                      +|+||.|.|+|++++.+||+ +|||++..+.+     ..+ +...+.....+.....         ...++.|++|  .+
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~   65 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEGD-----GLE-LRTAGNDHRWARLLEG---------ARKRLAYLSFGIFE   65 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeecC-----ceE-EEecCCCceEEEeecC---------CCCceeeEEEEeEh
Confidence            68999999999999999997 69999976542     233 3332212111111111         1123445444  45


Q ss_pred             CCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           91 ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        91 ~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      +|+++++++|+++|+++...+ ...  +.+.+||.|||||.|||...+
T Consensus        66 ~d~~~~~~~l~~~Gi~~~~~~-~~~--~~~~~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          66 DDFAAFARHLEAAGVALAAAP-PGA--DPDGVWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             hhHHHHHHHHHHcCCceecCC-CcC--CCCEEEEECCCCCEEEEecCC
Confidence            799999999999999987654 222  235799999999999999754

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.68  E-value=1.5e-15  Score=109.97  Aligned_cols=114  Identities=26%  Similarity=0.310  Sum_probs=78.6

Q ss_pred             ceEEEEcCCHHHHHHHHHhccCCeEeecCCCCC-CCccEEEeecCc-EEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCC
Q 029305           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD-FDGACRLFNYGM-GIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN   92 (195)
Q Consensus        15 ~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~-~~~~~~~~~~g~-~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~d   92 (195)
                      +||.|.|+|++++.+||+++|||++....+... ....|  +..+. ...+.....         ....+..|++|.|+|
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~---------~~~~~~~hl~~~v~d   69 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDPGVDAAAF--LRCDEDHHDLALFPG---------PERPGLHHVAFEVES   69 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccCCceeEEE--EEcCCCcceEEEEcC---------CCCCCeeEEEEEcCC
Confidence            599999999999999999999999876533100 11233  22221 111111111         114578999999997


Q ss_pred             HH---HHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           93 MA---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        93 l~---~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ++   +++++|++.|+++...+......+.+.+||.|||||.|||++..+
T Consensus        70 ~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          70 LDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             HHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence            64   788999999999886653322223478899999999999998654

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=2.1e-15  Score=105.92  Aligned_cols=106  Identities=19%  Similarity=0.225  Sum_probs=75.3

Q ss_pred             eEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC---cEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCC
Q 029305           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG---MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN   92 (195)
Q Consensus        16 hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g---~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~d   92 (195)
                      ...|.|+|++++.+||+++|||+.....+    ...+ +...+   ..+.+....          .......|++|.|+|
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~----------~~~~~~~~i~~~v~d   67 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMDHG----WIAT-FASPQNMTVQVSLATEG----------GTATVVPDLSIEVDD   67 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEcCC----ceEE-EeecCCCCcEEEEecCC----------CCCCCCCEEEEEeCC
Confidence            35688999999999999999999875422    1111 11111   223332111          111235699999999


Q ss_pred             HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           93 MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        93 l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +++++++|++.|+++...+.. ..++.+.+|+.|||||.|||++.
T Consensus        68 ~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          68 VDAALARAVAAGFAIVYGPTD-EPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHHHHhcCCeEecCCcc-CCCceEEEEEECCCCCEEEEEEc
Confidence            999999999999998876633 23455789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.68  E-value=7.6e-16  Score=126.56  Aligned_cols=119  Identities=18%  Similarity=0.196  Sum_probs=79.5

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCC---CccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF---DGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNH   85 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~---~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~H   85 (195)
                      +.+++|+||.|.|+|++++.+||+++|||++..+....+.   ...|  +..+...+.+...      . . ...++++|
T Consensus       141 ~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~------~-~-~~~g~~~H  210 (303)
T TIGR03211       141 VGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAW--LSVSNKAHDIAFV------G-D-PEPGKLHH  210 (303)
T ss_pred             cCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEE--EEcCCCCccccee------c-C-CCCCceEE
Confidence            5578999999999999999999999999998654211100   1122  2222122111110      0 0 11233899


Q ss_pred             EEEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           86 ISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        86 iaf~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +||.|+|   ++++.++|+++|+++...+...+....+.+||.|||||.||++..
T Consensus       211 iaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  265 (303)
T TIGR03211       211 VSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFGG  265 (303)
T ss_pred             EEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEecC
Confidence            9999996   555778999999998766533322234799999999999999843

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.68  E-value=2.2e-15  Score=105.19  Aligned_cols=108  Identities=20%  Similarity=0.321  Sum_probs=78.6

Q ss_pred             EEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec-CcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCCHHHH
Q 029305           18 SLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY-GMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIV   96 (195)
Q Consensus        18 ~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~dl~~~   96 (195)
                      .|.|+|++++++||+++|||++....+.    ..|..+.. +..+++.......  +    ....+..|++|.++|++++
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~--~----~~~~~~~~~~~~~~~~~~~   72 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHPE----PGYAFLSRGGAQLMLSEHDGDE--P----VPLGRGGSVYIEVEDVDAL   72 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcCC----CcEEEEEeCCEEEEEeccCCCC--C----CCCCCcEEEEEEeCCHHHH
Confidence            6899999999999999999999876541    23334443 3455554433211  1    1234567999999999999


Q ss_pred             HHHHHhCCCe-EeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           97 ERRLKEMKID-YVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        97 ~~~l~~~gv~-~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      .+++.++|++ +..++. ...++.+.+|+.||+|+.||+++
T Consensus        73 ~~~l~~~G~~~~~~~~~-~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          73 YAELKAKGADLIVYPPE-DQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHHcCCcceecCcc-CCCcccEEEEEECCCCCEEEecC
Confidence            9999999998 444442 23345589999999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.66  E-value=4.3e-15  Score=105.78  Aligned_cols=106  Identities=16%  Similarity=0.310  Sum_probs=76.8

Q ss_pred             eEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCCHH
Q 029305           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMA   94 (195)
Q Consensus        16 hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~dl~   94 (195)
                      ...|.|+|+++|++||++ |||+...+...     .|..+..+ ..+++......        .......|++|.|+|++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~~~~l~l~~~~~~--------~~~~~~~~~~~~v~dvd   70 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRGDLELHFFAHPDL--------DPATSPFGCCLRLPDVA   70 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcCCEEEEEEecCcC--------CCCCCcceEEEEeCCHH
Confidence            467899999999999999 99999876541     34344443 45666543211        11122458999999999


Q ss_pred             HHHHHHHhCCCeEe-------ccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           95 IVERRLKEMKIDYV-------KSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        95 ~~~~~l~~~gv~~~-------~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      +++++|+++|+++.       ..+ ....++.+.++|.|||||.|||.+
T Consensus        71 ~~~~~l~~~G~~~~~~~~~~~~~~-~~~~~g~~~~~~~DPdG~~ie~~~  118 (120)
T cd08350          71 ALHAEFRAAGLPETGSGIPRITPP-EDQPWGMREFALVDPDGNLLRFGQ  118 (120)
T ss_pred             HHHHHHHHhCccccccCCCcccCC-cCCCCceeEEEEECCCCCEEEeec
Confidence            99999999999853       122 222346689999999999999987

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.65  E-value=3.4e-15  Score=102.75  Aligned_cols=111  Identities=26%  Similarity=0.500  Sum_probs=82.9

Q ss_pred             eEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec-CcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCCHH
Q 029305           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY-GMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMA   94 (195)
Q Consensus        16 hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~dl~   94 (195)
                      |+.+.|+|++++.+||+++||++........  ...+..+.. +..+++....+... +    ....+..|++|.++|++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~--~~~~~~~~~~~~~i~l~~~~~~~~-~----~~~~~~~~~~~~v~~~~   73 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNG--GAEFAVLGLGGTRLELFEGDEPAP-A----PSGGGGVHLAFEVDDVD   73 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccC--CEEEEEEecCCceEEEecCCCCCC-c----ccCCCeeEEEEECCCHH
Confidence            7899999999999999999999988876421  123323443 35566665543221 1    23566899999999999


Q ss_pred             HHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEE
Q 029305           95 IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI  134 (195)
Q Consensus        95 ~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi  134 (195)
                      ++.++|.++|+.+...+.. ...+.+.+|+.||+||.|||
T Consensus        74 ~~~~~l~~~g~~~~~~~~~-~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          74 AAYERLKAAGVEVLGEPRE-EPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHHcCCcccCCCcC-CCCCcEEEEEECCCCcEEeC
Confidence            9999999999988876631 22345899999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=7.4e-15  Score=105.96  Aligned_cols=109  Identities=14%  Similarity=0.226  Sum_probs=73.3

Q ss_pred             ccceEEEEcCCHHHHHHHHHhccCCeEeecCCCC---------CCCccEE--Eeec---C--cEEEEeeeCCCCCCCCCC
Q 029305           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF---------DFDGACR--LFNY---G--MGIHLLKSEEPDNLPKAG   76 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~---------~~~~~~~--~~~~---g--~~~~ll~~~~~~~~~~~~   76 (195)
                      ++.|+.|.|+|+++|++||+++|||++..+....         .+.+.|.  .+..   .  ..++|.........    
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~----   77 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDY----   77 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCC----
Confidence            5789999999999999999999999987765311         1123331  1321   1  23444432221111    


Q ss_pred             CCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           77 KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        77 ~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                       ..+.+  |++|.|++. ++.++|+++|+++...+.   +    .+++.||||+.|||+.
T Consensus        78 -~~g~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~---~----~~fi~DPDG~~ie~~~  126 (127)
T cd08358          78 -ELGND--FLGITIHSK-QAVSNAKKHNWPVTEVED---G----VYEVKAPGGYKFYLID  126 (127)
T ss_pred             -CCCCC--EEEEEEECH-HHHHHHHHCCCceecCCC---C----EEEEECCCCCEEEEec
Confidence             22223  677777766 566999999999887552   2    7899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.64  E-value=6e-15  Score=120.64  Aligned_cols=120  Identities=21%  Similarity=0.327  Sum_probs=79.1

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccE-EEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAC-RLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~-~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      +.+++|+||.|.|+|+++|.+||+++|||++..+..... ...+ ..+..+...+.+...      .   ...++++|+|
T Consensus       132 ~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~Hia  201 (294)
T TIGR02295       132 VSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDE-GNLAAAWLHRKGGVHDIALT------N---GNGPRLHHIA  201 (294)
T ss_pred             ccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCC-CcEEEEEEecCCCcCceEee------c---CCCCceeeEE
Confidence            467899999999999999999999999999876532110 1111 011111111111110      0   2236799999


Q ss_pred             EEeCC---HHHHHHHHHhCCCe--EeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           88 FQCEN---MAIVERRLKEMKID--YVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        88 f~v~d---l~~~~~~l~~~gv~--~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      |.|+|   ++++.++|+++|++  +...+...+......+|++||+||.|||+...
T Consensus       202 f~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       202 YWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             EEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence            99997   55568899999987  54443222211235799999999999999854

The enzyme from Bacillus brevis contains manganese.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.62  E-value=1.5e-14  Score=117.96  Aligned_cols=117  Identities=19%  Similarity=0.196  Sum_probs=78.3

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCC--C-C--CCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS--F-D--FDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNH   85 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~--~-~--~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~H   85 (195)
                      ..+|+||.|.|+|+++|.+||+++|||++..+...  . .  +...|  +..+...+.+....        ....++++|
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~--l~~~~~~~~~~l~~--------~~~~~~~~H  209 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYF--LHCNERHHSLAFAA--------GPSEKRLNH  209 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEE--EEECCCcceEEEec--------CCCCCceEE
Confidence            46899999999999999999999999998654210  0 0  01223  22221111111110        022457899


Q ss_pred             EEEEeCCHHH---HHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           86 ISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        86 iaf~v~dl~~---~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      +||.|+|+++   +.++|+++|+ ....+......+...+|++|||||.||+....
T Consensus       210 iaf~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~~  264 (286)
T TIGR03213       210 LMLEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWGA  264 (286)
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecCc
Confidence            9999997666   7899999999 43333222223557899999999999998853

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.61  E-value=1.9e-14  Score=101.65  Aligned_cols=103  Identities=17%  Similarity=0.236  Sum_probs=72.4

Q ss_pred             EEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCCHHH
Q 029305           17 ISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAI   95 (195)
Q Consensus        17 v~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~dl~~   95 (195)
                      ..|.|+|+++|++||++ |||++..+.+.      +..+..+ ..+.+......         ...+..+++|.|+|+++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~~------~~~l~~~~~~l~l~~~~~~---------~~~~~~~~~~~v~did~   68 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWENDN------LAYFRLGNCAFYLQDYYVK---------DWAENSMLHLEVDDLEA   68 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCCC------EEEEEcCCEEEEeecCCCc---------ccccCCEEEEEECCHHH
Confidence            46889999999999988 99999876531      2234444 33433221111         11224579999999999


Q ss_pred             HHHHHHhCCCeEec-----cceecCCcceEEEEEECCCCCEEEEEe
Q 029305           96 VERRLKEMKIDYVK-----SRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        96 ~~~~l~~~gv~~~~-----~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      ++++|+++|+++..     ++. ...++.+.++|.|||||.|+|.+
T Consensus        69 ~~~~l~~~G~~~~~~~~~~~~~-~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          69 YYEHIKALGLPKKFPGVKLPPI-TQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHHcCCcccccceecCcc-ccCCCcEEEEEECCCccEEEeeC
Confidence            99999999987532     221 22345689999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.61  E-value=2.3e-14  Score=101.36  Aligned_cols=114  Identities=22%  Similarity=0.253  Sum_probs=76.7

Q ss_pred             EEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEee-cCcEEEEeeeCCCCCCCCCC-CCCCCCceEEEEEe---C
Q 029305           17 ISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFN-YGMGIHLLKSEEPDNLPKAG-KNINPKDNHISFQC---E   91 (195)
Q Consensus        17 v~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~g~~~~ll~~~~~~~~~~~~-~~~~~g~~Hiaf~v---~   91 (195)
                      |.|.|+|++++.+||+++|||++..+.. .  ...  .+. .+..+.++............ .....+..|++|.+   +
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~~-~--~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADSN-D--GVA--FFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEE   76 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccCC-C--ceE--EEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHH
Confidence            6899999999999999999999977622 1  112  233 34455555433211111100 02223445677665   4


Q ss_pred             CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           92 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        92 dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      +++++++++++.|+++...+... .++++.+|++|||||.|||+.
T Consensus        77 d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          77 EVDAVLARAAAAGATIVKPPQDV-FWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHHHHHHhCCCEEecCCccC-CCCceEEEEECCCCCEEEEee
Confidence            89999999999999998765332 344689999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.49  E-value=8.9e-13  Score=96.01  Aligned_cols=123  Identities=24%  Similarity=0.319  Sum_probs=81.7

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCC---------------------CCCCccEEEeecCcEEEEeeeCCCC
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS---------------------FDFDGACRLFNYGMGIHLLKSEEPD   70 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~---------------------~~~~~~~~~~~~g~~~~ll~~~~~~   70 (195)
                      -.+.|..++++|+.+|..||++++|+.+..+..-                     ......| .+.....++|.......
T Consensus        21 ~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~-~~~~~~~~ELthn~Gte   99 (170)
T KOG2944|consen   21 YLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVF-VFSRNAKLELTHNWGTE   99 (170)
T ss_pred             hhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceE-EecccCceeeecCCCCC
Confidence            3456777777777777777777777766553210                     0011234 33334456665544443


Q ss_pred             CCCCCC---CCCCC-CceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           71 NLPKAG---KNINP-KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        71 ~~~~~~---~~~~~-g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +.+...   ....+ |..||||.|+|++.+..+|++.||++...+ .++.. ...+|+.||||+.|||...
T Consensus       100 s~~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~-~dGk~-K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  100 SPPDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKL-KDGKM-KPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             CCcchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecC-CCccc-cceeEEECCCCCeEEEeec
Confidence            333111   13334 899999999999999999999999976655 33332 4689999999999999864

>PLN02300 lactoylglutathione lyase

Probab=99.48  E-value=1.4e-12  Score=106.52  Aligned_cols=121  Identities=16%  Similarity=0.207  Sum_probs=85.4

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCC--CCCCccEEEeec-C----cEEEEeeeCCCCCCCCCCCCCCCCc
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS--FDFDGACRLFNY-G----MGIHLLKSEEPDNLPKAGKNINPKD   83 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~-g----~~~~ll~~~~~~~~~~~~~~~~~g~   83 (195)
                      ...+.|+.|.|+|++++.+||+++||+++..+...  ..+...+  +.. +    ..+++.....   . ... ..+++.
T Consensus       152 ~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~lel~~~~~---~-~~~-~~g~~~  224 (286)
T PLN02300        152 PEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAM--MGYGPEDKTTVLELTYNYG---V-TEY-TKGNAY  224 (286)
T ss_pred             CCcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEE--EecCCCCCccEEEEeecCC---C-Ccc-ccCCce
Confidence            45788999999999999999999999999764321  1121122  221 1    1233322111   1 111 334678


Q ss_pred             eEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           84 NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        84 ~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      .|++|.|+|++++.+++.++|+++..++....+.+.+.++|.||||+.|+|++..
T Consensus       225 ~~i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~  279 (286)
T PLN02300        225 AQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNI  279 (286)
T ss_pred             eEEEEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccc
Confidence            8999999999999999999999998876544443447889999999999999864

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.46  E-value=2.4e-13  Score=95.45  Aligned_cols=98  Identities=22%  Similarity=0.354  Sum_probs=70.9

Q ss_pred             ceEEEEcCCHHHHHHHHHhccCCeEeecCCC--CCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeC
Q 029305           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGS--FDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   91 (195)
Q Consensus        15 ~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~   91 (195)
                      +||.|.|+|++++++||+++||++.......  ......+.....+ ..++|++...+....   .....|++|+||.|+
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~---~~~~~gi~Hia~~v~   77 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPL---DRGGGGIHHIAFEVD   77 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCHH---HHTSSEEEEEEEEES
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCccc---ccCCCCEEEEEEEeC
Confidence            6999999999999999999999987654221  1122333122222 478999877654211   146788999999999


Q ss_pred             CHHHHHHHHHhCCCeEeccceecC
Q 029305           92 NMAIVERRLKEMKIDYVKSRVEEG  115 (195)
Q Consensus        92 dl~~~~~~l~~~gv~~~~~~~~~~  115 (195)
                      |+++..++|+++|+++...+...+
T Consensus        78 D~d~~~~~l~~~G~~~~~~~~~~g  101 (109)
T PF13669_consen   78 DLDAAIARLEAQGFRVLDEGPRPG  101 (109)
T ss_dssp             HHHHHHHHHHHTTECEEECEEEET
T ss_pred             CHHHHHHHHHHCCCEEcccCcccC
Confidence            999999999999999887654443

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.35  E-value=9.6e-12  Score=87.21  Aligned_cols=119  Identities=23%  Similarity=0.282  Sum_probs=84.8

Q ss_pred             eEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCC--CCCCCCceEEEEEeC--
Q 029305           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAG--KNINPKDNHISFQCE--   91 (195)
Q Consensus        16 hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~--~~~~~g~~Hiaf~v~--   91 (195)
                      .|.|+|+||++|.+||+. |||+.-......  .........+..+-|++...-.....+.  ......-.-+|+.+.  
T Consensus         6 FvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde--~a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~ls~~s~   82 (133)
T COG3607           6 FVNLPVKDLEASKAFYTA-LGFKFNPQFSDE--DAACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISLSAGSR   82 (133)
T ss_pred             EEecchhhHHHHHHHHHH-hCcccCCCcccc--cceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEeccCcH
Confidence            689999999999999988 999998765422  3333245555666666544322222111  133344566888887  


Q ss_pred             -CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           92 -NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        92 -dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                       +++++.++..+.|.+...++...+..  +...|.|||||.||+.++.+
T Consensus        83 eevd~~v~ka~eaGGk~~~~~~d~gfM--Yg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          83 EEVDELVDKALEAGGKPANEPQDEGFM--YGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             HHHHHHHHHHHHcCCCCCCCccccccc--cceeeeCCCCCeEEEEEeCH
Confidence             68999999999999987777666655  46679999999999999765

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.25  E-value=1.2e-10  Score=97.87  Aligned_cols=173  Identities=10%  Similarity=0.067  Sum_probs=105.9

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCC-CCCCCCCCceEEEEE
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPK-AGKNINPKDNHISFQ   89 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~-~~~~~~~g~~Hiaf~   89 (195)
                      .+++||.+.|+|++++.+||++.|||+...+..... ...+..+..| ..+.+.....+.+... .....++|+.|+||.
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~-~~~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~   79 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHR-EKASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFR   79 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCC-ceeEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEE
Confidence            368999999999999999999999999887621000 1122244444 4555554332211110 001356889999999


Q ss_pred             eCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCC--CCCCCCCcchhhcccccccchhhhhhh
Q 029305           90 CENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL--PVVPLAGDAVRIRSCTSTVNCNFHQQQ  167 (195)
Q Consensus        90 v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~  167 (195)
                      |+|++++++++.++|+++..++...........-+.-++|..+-+++...-  ..+|....    ... . .+.... ..
T Consensus        80 V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~~~~~~~~~~~~~----~~~-~-~~~~~~-~~  152 (353)
T TIGR01263        80 VDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGGYKGSFYPGFFE----SLL-D-AALHEP-PP  152 (353)
T ss_pred             ECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCCCCCCCCCCCccc----ccc-c-cccccC-CC
Confidence            999999999999999999877644310122344456778888888764331  12222110    000 0 000000 00


Q ss_pred             hhhcCCCCCCCcccc--cccccccccc
Q 029305          168 IQQEPQINPQSCLSD--SIHAKEDFLH  192 (195)
Q Consensus       168 ~~~~~~~~~~~~~~~--~~~~~~~~~~  192 (195)
                      ...=..|.|+++..+  |...+.+||.
T Consensus       153 ~~~~~~iDHv~i~V~~~dl~~~~~fY~  179 (353)
T TIGR01263       153 GVGLIAIDHLVGNVYRGQMEPWAEFYE  179 (353)
T ss_pred             CCCeEEeeeeEcccCCccHHHHHHHHH
Confidence            001235999999999  9999999985

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.24  E-value=5.2e-10  Score=80.00  Aligned_cols=115  Identities=16%  Similarity=0.168  Sum_probs=81.5

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC---cEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG---MGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g---~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      ..+.|..|.++|++++.+||+++||++.....+-.  ...+..+..+   .+=.+....   ..     ....+...+.|
T Consensus         8 ~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~--~~~y~~f~~~~~~~gG~l~~~~---~~-----~p~~~~~~iy~   77 (127)
T COG3324           8 GTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMG--EMRYAVFPADGAGAGGGLMARP---GS-----PPGGGGWVIYF   77 (127)
T ss_pred             CccEEEeeecCCHHHHHHHHHHhhCceecccccCC--CceEEEEECCCccccceeccCC---cC-----CCCCCCEEEEE
Confidence            55789999999999999999999999998764311  1112123221   111111110   00     11145667889


Q ss_pred             EeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           89 QCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        89 ~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      .|+|+++.++++.+.|-.++.++.+-.+ +++.+.+.||+||+|-|...
T Consensus        78 ~v~did~~l~rv~~~GG~V~~p~~~~p~-~G~~a~~~Dp~Gn~~~l~s~  125 (127)
T COG3324          78 AVDDIDATLERVVAAGGKVLRPKTEFPG-GGRIAHFVDPEGNRFGLWSP  125 (127)
T ss_pred             ecCChHHHHHHHHhcCCeEEecccccCC-ceEEEEEECCCCCEEEEeec
Confidence            9999999999999999999998866554 45899999999999999863

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.23  E-value=1.6e-10  Score=79.91  Aligned_cols=123  Identities=17%  Similarity=0.241  Sum_probs=78.8

Q ss_pred             cceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEE--EeC
Q 029305           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISF--QCE   91 (195)
Q Consensus        14 i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf--~v~   91 (195)
                      +-|+.+.|+||+++++||.++||.+.....++.   ..+.+++.....|+-...+. ...++-.....-..|+..  .++
T Consensus         5 ~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd~w---vdfDfyGHQ~v~Hl~~q~~~-~~~g~V~~~~v~~pHfGvVl~~e   80 (138)
T COG3565           5 PFHLAIPVNDLDETRRFYGEVLGCKEGRSTDTW---VDFDFYGHQVVAHLTPQPDS-QGSGKVDGHGVPPPHFGVVLPVE   80 (138)
T ss_pred             ceEEeeeccccHHHHhhhhhhcccccccccceE---EEeeecccEEEEEecCCccc-ccCcccCCCCCCCccceEEEEHH
Confidence            569999999999999999999999987765521   11112222233444221111 111110122222456554  455


Q ss_pred             CHHHHHHHHHhCCCeEeccceec--CCc-ceEEEEEECCCCCEEEEEecCCC
Q 029305           92 NMAIVERRLKEMKIDYVKSRVEE--GGI-NVDQLFFHDPDGSMIEICNCDVL  140 (195)
Q Consensus        92 dl~~~~~~l~~~gv~~~~~~~~~--~~~-~~~~~~~~DPdGn~iEi~~~~~~  140 (195)
                      |.-++.++|+++|++...+|.-.  +.. ..+.+++.||.||.+|+-..+..
T Consensus        81 dW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR~~  132 (138)
T COG3565          81 DWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFRDQ  132 (138)
T ss_pred             HHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecccch
Confidence            89999999999999988777421  111 35789999999999999886553

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.21  E-value=6e-11  Score=91.55  Aligned_cols=101  Identities=17%  Similarity=0.282  Sum_probs=69.4

Q ss_pred             cCccceEEEEcC--CHHHHHHHHHhccCCeEeecCCCCC-CCcc-EEEeec---CcEEEEeeeCCCCCC--CCC--CCCC
Q 029305           11 LKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGSFD-FDGA-CRLFNY---GMGIHLLKSEEPDNL--PKA--GKNI   79 (195)
Q Consensus        11 i~~i~hv~l~v~--dl~~s~~FY~~~LG~~~~~~~~~~~-~~~~-~~~~~~---g~~~~ll~~~~~~~~--~~~--~~~~   79 (195)
                      +++|+||++.|+  |++++.+||+++|||+........+ ..+. +..+..   +..+.|.+...+...  ...  ....
T Consensus         1 ~~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~   80 (191)
T cd07250           1 LTRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYG   80 (191)
T ss_pred             CceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhC
Confidence            467999999999  9999999999999999877543211 1111 112222   234555544331000  000  0134


Q ss_pred             CCCceEEEEEeCCHHHHHHHHHhCCCeEeccc
Q 029305           80 NPKDNHISFQCENMAIVERRLKEMKIDYVKSR  111 (195)
Q Consensus        80 ~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~  111 (195)
                      ++|+.|+||.|+|+++++++|+++|+++...|
T Consensus        81 G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P  112 (191)
T cd07250          81 GAGVQHIALATDDIFATVAALRARGVEFLPIP  112 (191)
T ss_pred             CCceeEEEEECCCHHHHHHHHHHcCCeeccCc
Confidence            67999999999999999999999999998765

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.15  E-value=1.6e-10  Score=81.54  Aligned_cols=122  Identities=25%  Similarity=0.295  Sum_probs=73.2

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCc--cEEEeecCc--EEEEeeeC-------CCCCCCCC-CCCC
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDG--ACRLFNYGM--GIHLLKSE-------EPDNLPKA-GKNI   79 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~--~~~~~~~g~--~~~ll~~~-------~~~~~~~~-~~~~   79 (195)
                      ++++||.|.|+|+++|.+||+++||++...+........  ....+....  ........       ........ ....
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            368999999999999999999999999988765321111  110111110  00110000       00000000 0011


Q ss_pred             C-CCceEEEEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           80 N-PKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        80 ~-~g~~Hiaf~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      . .+..|+++.+++   .......+...|..+.....  .. ....+||+||||+.||+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~--~~-~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP--GR-GGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecC--CC-cceEEEEECCCCcEEEeeC
Confidence            1 357899999997   66666666677888765443  11 1138999999999999974

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.02  E-value=1.6e-08  Score=72.81  Aligned_cols=111  Identities=17%  Similarity=0.108  Sum_probs=70.0

Q ss_pred             EEEEc-CCHHHHHHHHHhccCCeEeecCCCCC--------CCc--cEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCce
Q 029305           17 ISLVC-RSVEASLDFYQNVLGFFPIRRPGSFD--------FDG--ACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDN   84 (195)
Q Consensus        17 v~l~v-~dl~~s~~FY~~~LG~~~~~~~~~~~--------~~~--~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~   84 (195)
                      ..|.+ .|.+++++||+++||+++........        ..+  ....+..+ ..+.+.... + ...    ....+..
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~-~-~~~----~~~~~~~   76 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGG-P-GFP----FTFGNGI   76 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCC-C-CCC----CCCCCCE
Confidence            34666 89999999999999999887542100        011  11223333 333333222 1 111    1123456


Q ss_pred             EEEEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEE
Q 029305           85 HISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  135 (195)
Q Consensus        85 Hiaf~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~  135 (195)
                      ++++.|++   +++++++|.+.| ++..++. ...++.+..+++||+|+.|+|.
T Consensus        77 ~l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~-~~~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          77 SLSVECDSEEEADRLFEALSEGG-TVLMPLQ-KTFWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEEEECCCHHHHHHHHHHHhcCC-eEeccch-hcCcccccEEEECCCCCEEEeC
Confidence            88999985   778889987766 6665553 3356668999999999999973

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.96  E-value=3.6e-09  Score=89.01  Aligned_cols=104  Identities=15%  Similarity=0.267  Sum_probs=71.7

Q ss_pred             CcccCccceEEEEcC--CHHHHHHHHHhccCCeEeecCCC-CCCCcc--EEEee-cC-cEEEEeeeCCCC--CCCCC--C
Q 029305            8 PLCLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGS-FDFDGA--CRLFN-YG-MGIHLLKSEEPD--NLPKA--G   76 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~--dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~--~~~~~-~g-~~~~ll~~~~~~--~~~~~--~   76 (195)
                      .+.+.+|+||++.|.  |++++.+||+++|||+...+.+- ..+.+.  +.+.. .| ..+.|.+.....  +....  .
T Consensus       153 ~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl~  232 (353)
T TIGR01263       153 GVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFLE  232 (353)
T ss_pred             CCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHHH
Confidence            466889999999999  99999999999999998765331 011121  21222 22 456665532111  10000  1


Q ss_pred             CCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccc
Q 029305           77 KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSR  111 (195)
Q Consensus        77 ~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~  111 (195)
                      ...+.|+.|+||.|+|+++.+++|+++|+++...|
T Consensus       233 ~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P  267 (353)
T TIGR01263       233 FYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTP  267 (353)
T ss_pred             HcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCC
Confidence            13468999999999999999999999999988765

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.83  E-value=3.8e-08  Score=81.20  Aligned_cols=103  Identities=15%  Similarity=0.186  Sum_probs=70.5

Q ss_pred             eEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeC---C
Q 029305           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE---N   92 (195)
Q Consensus        16 hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~---d   92 (195)
                      ||+|.|+|+++|++||+.+||+.. ...++    . . .+  +..+..+....++       .....-.-+|+.++   +
T Consensus       250 fVNLpV~DL~rS~~FYt~LF~~n~-Fsde~----a-~-cm--~dtI~vMllt~~D-------~~~~~evLl~Ls~~Sre~  313 (357)
T PRK01037        250 SVVLEVQDLRRAKKFYSKMFGLEC-WDGDK----L-F-LL--GKTSLYLQQTKAE-------KKNRGTTTLSLELECEHD  313 (357)
T ss_pred             EEEeeeCCHHHHHHHHHHHhCCCC-CCCCc----c-c-cc--cCcEEEEEecCCC-------CCCcceEEEEeccCCHHH
Confidence            999999999999999999988885 43332    1 2 22  3333333222221       22233456888888   6


Q ss_pred             HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           93 MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        93 l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      ++++.++..++|.....++ .+.|+   .--|.||||+.||+++..
T Consensus       314 VD~lv~~A~aaGG~~~~~~-~D~Gf---~rsf~D~DGH~WEi~~~~  355 (357)
T PRK01037        314 FVRFLRRWEMLGGELGEQA-DGHFP---LRLVFDLDGHIWVVSCVQ  355 (357)
T ss_pred             HHHHHHHHHHcCCCCCCCc-ccccC---cceeECCCCCEEEEEEEe
Confidence            8889999999998664444 45554   446899999999999753

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.74  E-value=7.9e-08  Score=81.52  Aligned_cols=103  Identities=12%  Similarity=0.180  Sum_probs=71.3

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCC----CCccE-EEeecC---cEEEEeeeCCC---CCCCCC--
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD----FDGAC-RLFNYG---MGIHLLKSEEP---DNLPKA--   75 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~----~~~~~-~~~~~g---~~~~ll~~~~~---~~~~~~--   75 (195)
                      ..+.+|+||++.|.+++.+..||+++|||+..+..+..+    ..+.. ..+..+   ..+.|.+....   .+....  
T Consensus       176 ~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~eFL  255 (398)
T PLN02875        176 YGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQTYL  255 (398)
T ss_pred             CCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHHHHH
Confidence            347899999999999999999999999998876433111    11111 122222   44666654321   111111  


Q ss_pred             CCCCCCCceEEEEEeCCHHHHHHHHHhC----CCeEeccc
Q 029305           76 GKNINPKDNHISFQCENMAIVERRLKEM----KIDYVKSR  111 (195)
Q Consensus        76 ~~~~~~g~~Hiaf~v~dl~~~~~~l~~~----gv~~~~~~  111 (195)
                      ....++|+.||||.++|+.+..+.|+++    |+++...|
T Consensus       256 ~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        256 EHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             HhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence            1245689999999999999999999998    99998754

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.73  E-value=7.8e-07  Score=64.65  Aligned_cols=119  Identities=17%  Similarity=0.127  Sum_probs=76.5

Q ss_pred             EEEEcC-CHHHHHHHHHhccCCeEeecCCCCCC--------Ccc--EEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceE
Q 029305           17 ISLVCR-SVEASLDFYQNVLGFFPIRRPGSFDF--------DGA--CRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNH   85 (195)
Q Consensus        17 v~l~v~-dl~~s~~FY~~~LG~~~~~~~~~~~~--------~~~--~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~H   85 (195)
                      .-|..+ |-+++++||+++||.+.+.+....+.        .+.  ...+..+....++....+ .....  ..++...-
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~-~~~~~--~~~~~s~~   80 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFP-DMGAT--EGGGTSLS   80 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCC-ccCcc--cCCCeeEE
Confidence            356778 99999999999999998876432110        011  112333323333322222 11110  11223345


Q ss_pred             EEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           86 ISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        86 iaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +.+.+.+++++++++.+.|++++.+. ...-|+.+...++||.|+.|-|....+
T Consensus        81 l~~~~~d~da~f~~a~~aGa~v~mpl-~~~fwG~r~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          81 LDLYVEDVDAVFERAAAAGATVVMPL-EDTFWGDRYGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEEEehHHHHHHHHHHhcCCeEEecc-hhcCcccceEEEECCCCCEEEEecCcc
Confidence            66777799999999999998887766 345566689999999999999987543

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.72  E-value=7.8e-08  Score=74.93  Aligned_cols=116  Identities=18%  Similarity=0.287  Sum_probs=76.2

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCC---------CCCCCccEE--EeecC--cEEEEeeeCCCCCCCCCCCC
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPG---------SFDFDGACR--LFNYG--MGIHLLKSEEPDNLPKAGKN   78 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~---------~~~~~~~~~--~~~~g--~~~~ll~~~~~~~~~~~~~~   78 (195)
                      .+.-|+++.|.|..++++||+++|||++.+..+         +-++++.|.  +++.|  ....+++..-  +..-....
T Consensus        16 ~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTY--NYgV~~Ye   93 (299)
T KOG2943|consen   16 RRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTY--NYGVSKYE   93 (299)
T ss_pred             hheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEe--ccCcccee
Confidence            456699999999999999999999999988543         123455552  34444  2222232222  12222236


Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           79 INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        79 ~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      .+.++.|+.+.++++-...+.+...+-   .    .++  .-.+++.||||+.++|.+..
T Consensus        94 lGndfg~i~I~s~dv~~~ve~v~~p~~---~----~~g--~~~~~v~dPdGykF~l~~~~  144 (299)
T KOG2943|consen   94 LGNDFGGITIASDDVFSKVEKVNAPGG---K----GSG--CGIAFVKDPDGYKFYLIDRG  144 (299)
T ss_pred             ccCCcccEEEeHHHHHHHHHHhcCcCC---c----ccc--eEEEEEECCCCcEEEEeccC
Confidence            778899999988877666555543332   1    122  24779999999999999843

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.71  E-value=6.8e-07  Score=62.65  Aligned_cols=114  Identities=21%  Similarity=0.182  Sum_probs=63.4

Q ss_pred             eEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCCHHH
Q 029305           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAI   95 (195)
Q Consensus        16 hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~dl~~   95 (195)
                      +-+|.|+|-+...+||+++|||++..+..      ++..++.......+..+..+....+.-...-.+.++.+.+++..+
T Consensus         3 ~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~E   76 (125)
T PF14506_consen    3 IPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPKE   76 (125)
T ss_dssp             EEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHHH
T ss_pred             CceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHHH
Confidence            56899999999999999999999998754      333455444333333222212221111333468999999998877


Q ss_pred             HHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           96 VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        96 ~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +.+.| .+|..+..--   .|-.+++|-..+|+|+.+.|...++
T Consensus        77 Ie~LL-ar~~~~~~l~---kg~~gyAfe~vSPEgd~~llhaEdd  116 (125)
T PF14506_consen   77 IEALL-ARGAQYDRLY---KGKNGYAFEAVSPEGDRFLLHAEDD  116 (125)
T ss_dssp             HHHHH-HC-S--SEEE---E-SSSEEEEEE-TT--EEEEE--S-
T ss_pred             HHHHH-hcccccceeE---EcCCceEEEEECCCCCEEEEEEcCC
Confidence            77666 4444432221   1223378899999999999998654

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.67  E-value=1.7e-07  Score=74.49  Aligned_cols=98  Identities=16%  Similarity=0.205  Sum_probs=64.3

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcE-EEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG-IHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~-~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      -+.|+||+|.|.|++++.+||+++|||++..+.+    .+.  ++..|.. .|+..-.-...-.........|+..+.+.
T Consensus       166 ~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~----~A~--F~a~G~YHHHia~N~W~s~~~~~~~~~~~GLa~~~i~  239 (265)
T COG2514         166 GTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP----SAL--FLASGDYHHHLAANTWNSRGARPRNANASGLAWLEIH  239 (265)
T ss_pred             CcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC----cce--EEecCCcceeEEEeccccCCCCCCCCCCCCcceEEEE
Confidence            5779999999999999999999999999998833    233  4555544 44432222211111112567889999999


Q ss_pred             eCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEE
Q 029305           90 CENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  135 (195)
Q Consensus        90 v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~  135 (195)
                      +++-..+......                     ..||.|+.|.+.
T Consensus       240 ~~~~~~l~~~~~~---------------------~~Dp~G~~i~~~  264 (265)
T COG2514         240 TPDPEKLDATGTR---------------------LTDPWGIVIRVV  264 (265)
T ss_pred             cCCcccccccccc---------------------eecCCCceEEEe
Confidence            8864433211110                     179999998875

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.59  E-value=3.4e-07  Score=71.38  Aligned_cols=114  Identities=16%  Similarity=0.289  Sum_probs=75.2

Q ss_pred             cceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCc---EEEEeeeCCCCCCCCCCCCCCCCceEEEEEe
Q 029305           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGM---GIHLLKSEEPDNLPKAGKNINPKDNHISFQC   90 (195)
Q Consensus        14 i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~---~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v   90 (195)
                      +..|.|.|.||++|+.||+++||+++.+.....  ..+  .++.|.   .++|....+.-       ....|...++|.+
T Consensus       150 v~~V~l~VgdL~ks~kyw~~~lgM~ilekeek~--t~~--~mgYgd~q~~LElt~~~~~i-------d~~kg~griafai  218 (299)
T KOG2943|consen  150 VLQVMLNVGDLQKSIKYWEKLLGMKILEKEEKY--TRA--RMGYGDEQCVLELTYNYDVI-------DRAKGFGRIAFAI  218 (299)
T ss_pred             eEEEEEEehhHHHHHHHHHHHhCcchhhhhhhh--hhh--hhccCCcceEEEEEeccCcc-------cccccceeEEEec
Confidence            568999999999999999999999998853321  112  344443   34444333221       3334566677777


Q ss_pred             C--CHHHHHHHHHhCCCeEeccce---ecCCcceEEEEEECCCCCEEEEEecC
Q 029305           91 E--NMAIVERRLKEMKIDYVKSRV---EEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        91 ~--dl~~~~~~l~~~gv~~~~~~~---~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      +  ++..+.+.++..+-++..+..   ..++...+...+.||||+.|-++...
T Consensus       219 p~d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde  271 (299)
T KOG2943|consen  219 PTDDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDE  271 (299)
T ss_pred             cccccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccH
Confidence            6  666666666665444433322   12455778999999999999998754

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.47  E-value=6.6e-07  Score=67.89  Aligned_cols=123  Identities=17%  Similarity=0.206  Sum_probs=63.8

Q ss_pred             cceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCC--CccEEEeecCcEEEEeeeCCCCCCC--CCC-----CCCCCCce
Q 029305           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF--DGACRLFNYGMGIHLLKSEEPDNLP--KAG-----KNINPKDN   84 (195)
Q Consensus        14 i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~--~~~~~~~~~g~~~~ll~~~~~~~~~--~~~-----~~~~~g~~   84 (195)
                      |+||.+.|+|++++.++|++.|||.+.....+...  ......+..+ .++++........+  ...     .....|+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~-YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~   79 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDG-YLELIAIDPEAPAPDRGRWFGLDRLAGGEGLY   79 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSS-EEEEEEES-HHHSTGGGT-TTTHHHHT--EEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCc-eEEEEEeCCcccccccccceechhhcCCCCeE
Confidence            68999999999999999977899999886554321  2233355555 99999865433221  111     02467899


Q ss_pred             EEEEEeCCHHHHHHHHHhCCCeEeccceecCCc-ceEEEEEECC----CCCEEEEEec
Q 029305           85 HISFQCENMAIVERRLKEMKIDYVKSRVEEGGI-NVDQLFFHDP----DGSMIEICNC  137 (195)
Q Consensus        85 Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~-~~~~~~~~DP----dGn~iEi~~~  137 (195)
                      ++|+.++|+++..++|++.|+........+++. ..+.+++.++    .+..-+++++
T Consensus        80 ~~~l~t~d~~~~~~~l~~~G~~~~~r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~  137 (175)
T PF13468_consen   80 GWALRTDDIEAVAARLRAAGLDAGSRVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQW  137 (175)
T ss_dssp             EEEEE-S-HHHHHHHHHTTT-EEEEEEEEEE-EEEEEEEEEE-SS---SS---EEEEE
T ss_pred             EEEEecCCHHHHHHHHHhcCCCCCCcCcCCCCcceEEEEEeCCcccccCCCCcEEEEe
Confidence            999999999999999999998732222222221 2244555553    2445555543

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.44  E-value=4.8e-06  Score=70.77  Aligned_cols=171  Identities=11%  Similarity=0.009  Sum_probs=104.0

Q ss_pred             cceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCC--CccEEEeecCcEEEEeeeCC-CC--C----------CCCC---
Q 029305           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF--DGACRLFNYGMGIHLLKSEE-PD--N----------LPKA---   75 (195)
Q Consensus        14 i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~--~~~~~~~~~g~~~~ll~~~~-~~--~----------~~~~---   75 (195)
                      ++||.+.|.|.+++..||+..|||+.+...+....  ...-..+..|.-..++...- +.  .          .+..   
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSD   80 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcH
Confidence            58999999999999999999999998775441100  11112455553333333221 10  0          0000   


Q ss_pred             -----CCCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCC----cceEEEEEECCCCCEEEEEecCCCCCC-CC
Q 029305           76 -----GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGG----INVDQLFFHDPDGSMIEICNCDVLPVV-PL  145 (195)
Q Consensus        76 -----~~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~----~~~~~~~~~DPdGn~iEi~~~~~~~~~-p~  145 (195)
                           ....+++..-+||+|+|++.+++++.++|.+....+...+.    ......-+.-++|..+-|++...-... -+
T Consensus        81 ~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~~~~~~~f~  160 (398)
T PLN02875         81 AARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYKGFDGAKFL  160 (398)
T ss_pred             HHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccCCCCCCccC
Confidence                 01345788899999999999999999999998877654321    113455577788999888885431111 11


Q ss_pred             CCcchhhcccccccchhhhhhhhhhcCCCCCCCcccccccccccccc
Q 029305          146 AGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                      +....+.. . ....      ....=..|.|++...|+...+.+||.
T Consensus       161 p~f~~~~~-~-~~~~------~~~gl~~IDHi~iaV~~ld~a~~fY~  199 (398)
T PLN02875        161 PGYEPVES-S-SSFP------LDYGLRRLDHAVGNVPNLLPAVNYIA  199 (398)
T ss_pred             CCcccccc-c-ccCC------CCCCcceeCcceechhhHHHHHHHHH
Confidence            11100100 0 0000      00012379999999999999999885

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.31  E-value=1.9e-06  Score=62.90  Aligned_cols=124  Identities=22%  Similarity=0.373  Sum_probs=79.1

Q ss_pred             CCCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCC-CCCCCCCc
Q 029305            6 ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKA-GKNINPKD   83 (195)
Q Consensus         6 ~~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~-~~~~~~g~   83 (195)
                      .||+.+.++++|.+.+.+.++...+++ .|||+.+.+-.+   .... ++..| +.+.+- .+ +.+.... ....+++.
T Consensus         2 ~nP~g~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrs---k~v~-l~rQG~I~~vln-~e-p~s~a~~~~~~HG~sv   74 (139)
T PF14696_consen    2 DNPLGLDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRS---KDVT-LYRQGDINFVLN-SE-PDSFAAEFAAQHGPSV   74 (139)
T ss_dssp             --TT-EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECC---CSEE-EEEETTEEEEEE-EE-STSCHHHHHHHHSSEE
T ss_pred             CCCCCCCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCC---cceE-EEEeCCEEEEEe-CC-CcchHHHHHHhcCCEE
Confidence            368899999999999999888888885 599999876432   2333 55555 344333 22 2111100 02446788


Q ss_pred             eEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           84 NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        84 ~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      .-++|+|+|...++++..+.|.+....+...+.  ...--++-++|..+-++...
T Consensus        75 ~aiafrV~Da~~A~~rA~~~GA~~~~~~~~~~e--~~~paI~g~G~sl~yfVdr~  127 (139)
T PF14696_consen   75 CAIAFRVDDAAAAYERAVALGAEPVQEPTGPGE--LNIPAIRGIGGSLHYFVDRY  127 (139)
T ss_dssp             EEEEEEES-HHHHHHHHHHTT--EEEEEEETT---BEEEEEE-CCC-EEEEEE--
T ss_pred             EEEEEEeCCHHHHHHHHHHcCCcCcccCCCCCc--EeeeeEEccCCCEEEEEecC
Confidence            999999999999999999999998877654443  24566788888888888853

>PRK10148 hypothetical protein; Provisional

Probab=98.10  E-value=0.00036  Score=51.55  Aligned_cols=117  Identities=12%  Similarity=0.002  Sum_probs=70.2

Q ss_pred             EEEEcC-CHHHHHHHHHhccCCeEeecCC--CC---------C-------CCcc--EEEeecCcEEEEeeeCCCCCCCCC
Q 029305           17 ISLVCR-SVEASLDFYQNVLGFFPIRRPG--SF---------D-------FDGA--CRLFNYGMGIHLLKSEEPDNLPKA   75 (195)
Q Consensus        17 v~l~v~-dl~~s~~FY~~~LG~~~~~~~~--~~---------~-------~~~~--~~~~~~g~~~~ll~~~~~~~~~~~   75 (195)
                      .-|..+ |-+++.+||+++||.++.....  ..         +       .++.  ...+..+.. .++..+.....   
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~-~lm~sD~~~~~---   80 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGS-DIMMSDAIPSG---   80 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCE-EEEEECCCCCc---
Confidence            455565 8999999999999998764310  00         0       0111  112333322 33333321111   


Q ss_pred             CCCCCCCceEEEEEeCCHHH---HHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCC
Q 029305           76 GKNINPKDNHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLP  141 (195)
Q Consensus        76 ~~~~~~g~~Hiaf~v~dl~~---~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~  141 (195)
                        .......++++.++|.++   +++.| +.|.++..+. .+..|+.+...+.||.|+.|-|......|
T Consensus        81 --~~~~~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl-~~~~wg~~~g~v~D~fGi~W~l~~~~~~~  145 (147)
T PRK10148         81 --KAHYSGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAW-QETFWAHGFGKVTDKFGVPWMINVVKQQP  145 (147)
T ss_pred             --CCCCCeEEEEEECCCHHHHHHHHHHh-hCCCEEEecc-hhcchhhccEEEECCCCCEEEEEecCCCC
Confidence              111135678888888776   66666 5777777655 33455667889999999999998865544

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.05  E-value=2.6e-05  Score=63.36  Aligned_cols=127  Identities=14%  Similarity=0.156  Sum_probs=77.9

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEE--EeecCcEEEEeee-CCCCCC-CCC-CCCCCCCce
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACR--LFNYGMGIHLLKS-EEPDNL-PKA-GKNINPKDN   84 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~--~~~~g~~~~ll~~-~~~~~~-~~~-~~~~~~g~~   84 (195)
                      .+.+++||.+.|.|...+..||+..|||++....+-......|.  .+..|.-..++.. ..+... .+. ....+.|..
T Consensus        14 ~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdgvk   93 (381)
T KOG0638|consen   14 KFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGVK   93 (381)
T ss_pred             ceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccchh
Confidence            47889999999999999999999999999876432100011111  2334423333322 222110 110 014455677


Q ss_pred             EEEEEeCCHHHHHHHHHhCCCeEeccceecCCc--ceEEEEEECCCCCEEEEEe
Q 029305           85 HISFQCENMAIVERRLKEMKIDYVKSRVEEGGI--NVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        85 Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~--~~~~~~~~DPdGn~iEi~~  136 (195)
                      -+||.|+|++++.+.+.++|+.+..++......  ..+.+.+..+.-...-+++
T Consensus        94 dvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvE  147 (381)
T KOG0638|consen   94 DVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVE  147 (381)
T ss_pred             ceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhh
Confidence            899999999999999999999998886433111  2355555555433333333

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.89  E-value=1.4e-05  Score=65.85  Aligned_cols=103  Identities=16%  Similarity=0.250  Sum_probs=69.4

Q ss_pred             cccCccceEEEEcC--CHHHHHHHHHhccCCeEeecCCCC-CCCccEE---EeecC-cEEEEeeeCCCCCCCCCC--CCC
Q 029305            9 LCLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGSF-DFDGACR---LFNYG-MGIHLLKSEEPDNLPKAG--KNI   79 (195)
Q Consensus         9 ~~i~~i~hv~l~v~--dl~~s~~FY~~~LG~~~~~~~~~~-~~~~~~~---~~~~g-~~~~ll~~~~~~~~~~~~--~~~   79 (195)
                      ..+..|+|++..|.  .++.+..||+++|||+.....+-. +..+...   ....| ..+-|-+..+..+.....  ...
T Consensus       163 ~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y~  242 (363)
T COG3185         163 VGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREYR  242 (363)
T ss_pred             cCceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHhC
Confidence            45689999999985  999999999999999987753311 1111110   11122 233333333322211110  256


Q ss_pred             CCCceEEEEEeCCHHHHHHHHHhCCCeEeccc
Q 029305           80 NPKDNHISFQCENMAIVERRLKEMKIDYVKSR  111 (195)
Q Consensus        80 ~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~  111 (195)
                      +.|+.||||.++|+-+..++|++.|+++...|
T Consensus       243 G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip  274 (363)
T COG3185         243 GEGIQHIAFGTDDIYATVAALRERGVKFLPIP  274 (363)
T ss_pred             CCcceEEEecccHHHHHHHHHHHcCCccCCCc
Confidence            77999999999999999999999999988765

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.55  E-value=0.0012  Score=54.70  Aligned_cols=119  Identities=20%  Similarity=0.345  Sum_probs=78.7

Q ss_pred             CCCCcccCccceEEEEcCCH-HHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCC-CCCCCCCCC
Q 029305            5 VENPLCLKSLNHISLVCRSV-EASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLP-KAGKNINPK   82 (195)
Q Consensus         5 ~~~~~~i~~i~hv~l~v~dl-~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~-~~~~~~~~g   82 (195)
                      ..+|+...++.+|.+.|.|. ++...++.. |||.....--+   ..+. ++..| .+.++-...+.+.. ......+++
T Consensus        14 ~~~P~~~~GfeFvEf~~~d~~~~l~~l~~~-lGF~~~~~Hrs---k~v~-l~rQG-dinlvvn~~~~s~a~~f~~~Hgps   87 (363)
T COG3185          14 LANPEGTDGFEFVEFAVPDPQEALGALLGQ-LGFTAVAKHRS---KAVT-LYRQG-DINLVVNAEPDSFAAEFLDKHGPS   87 (363)
T ss_pred             ccCCCCCCceeEEEEecCCHHHHHHHHHHH-hCccccccccc---ccee-EEEeC-CEEEEEcCCCcchhhHHHHhcCCc
Confidence            34667789999999999999 666666655 99998765332   2344 55555 33333222222211 111366788


Q ss_pred             ceEEEEEeCCHHHHHHHHHhCCCeEecccee--------cCCcceEEEEEECCCC
Q 029305           83 DNHISFQCENMAIVERRLKEMKIDYVKSRVE--------EGGINVDQLFFHDPDG  129 (195)
Q Consensus        83 ~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~--------~~~~~~~~~~~~DPdG  129 (195)
                      .+-++|.|+|...++++..+.|.+....+..        -.+.+..-+||.|.+|
T Consensus        88 ~~a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~  142 (363)
T COG3185          88 ACAMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYG  142 (363)
T ss_pred             hheeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCC
Confidence            8999999999999999999999854443321        1233457889999883

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=97.38  E-value=0.00027  Score=49.16  Aligned_cols=82  Identities=13%  Similarity=0.063  Sum_probs=58.7

Q ss_pred             eEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCC-CEEEEEecCCCCCCCCCCcchhhcccccccch
Q 029305           84 NHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDG-SMIEICNCDVLPVVPLAGDAVRIRSCTSTVNC  161 (195)
Q Consensus        84 ~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdG-n~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~~  161 (195)
                      .|++|.|+|++++.+.+.+ .|+....... ....+.+..++..++| ..|||++.....            +.   ++.
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~-~~~~~v~~~~~~~~~~~~~iELi~p~~~~------------~~---~~~   64 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYR-DEPQGVRVAFLYLGDGPVQIELIQPLDGD------------SP---LDR   64 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEE-EGCTTEEEEEEEETTETEEEEEEEESSTT------------CH---HHH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEe-cCCCCEEEEEEEeCCCcEEEEEEEeCCCC------------cc---ccc
Confidence            5999999999999999998 8987654332 2233456778888888 689999943311            11   111


Q ss_pred             hhhhhhhhhcCCCCCCCccccccccccc
Q 029305          162 NFHQQQIQQEPQINPQSCLSDSIHAKED  189 (195)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (195)
                              ..+.++|+.|.++|++++.+
T Consensus        65 --------~~~gi~Hia~~v~D~d~~~~   84 (109)
T PF13669_consen   65 --------GGGGIHHIAFEVDDLDAAIA   84 (109)
T ss_dssp             --------TSSEEEEEEEEESHHHHHHH
T ss_pred             --------CCCCEEEEEEEeCCHHHHHH
Confidence                    67889999999999988754

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=96.98  E-value=0.00091  Score=54.60  Aligned_cols=100  Identities=19%  Similarity=0.264  Sum_probs=69.1

Q ss_pred             cccCccceEEEEcC--CHHHHHHHHHhccCCeEeecCCCCCCCcc------EEEeecCcEEEEeeeCCCCCCCCCC----
Q 029305            9 LCLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGSFDFDGA------CRLFNYGMGIHLLKSEEPDNLPKAG----   76 (195)
Q Consensus         9 ~~i~~i~hv~l~v~--dl~~s~~FY~~~LG~~~~~~~~~~~~~~~------~~~~~~g~~~~ll~~~~~~~~~~~~----   76 (195)
                      +.+..|+|++..++  .++.+.+||.+.|||..-+..+..+....      +.+......+. +....  +.+++.    
T Consensus       174 ~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~-mpinE--p~~G~k~ksQ  250 (381)
T KOG0638|consen  174 GGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIK-MPINE--PAPGKKKKSQ  250 (381)
T ss_pred             cceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEE-EeccC--CCCCCccHHH
Confidence            45788999999999  78899999999999988776542221111      10111222232 22222  222221    


Q ss_pred             ------CCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccc
Q 029305           77 ------KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSR  111 (195)
Q Consensus        77 ------~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~  111 (195)
                            ...++|+.|+++.++|+-++.+.|+++|.+....|
T Consensus       251 Iqeyv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~P  291 (381)
T KOG0638|consen  251 IQEYVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPP  291 (381)
T ss_pred             HHHHHHhcCCCceeeeeecchHHHHHHHHHHhcCCccccCC
Confidence                  35778999999999999999999999999988665

>PF15067 FAM124: FAM124 family

Probab=96.43  E-value=0.013  Score=45.96  Aligned_cols=104  Identities=20%  Similarity=0.289  Sum_probs=62.1

Q ss_pred             ccceEEEEcC--CHHHHHHHHHhccCCeEeecCCCCCCCccEEEe-ecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           13 SLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGSFDFDGACRLF-NYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        13 ~i~hv~l~v~--dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      .|-.++|.|+  |.+.+++||+-+|+-+...+...+   ..|.++ ..+..+.+--..-+....    .......-+.|.
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~~F---C~F~lys~~~~~iQlsLK~lp~~~~----p~p~esavLqF~  200 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQKEDF---CFFTLYSQPGLDIQLSLKQLPPGMS----PEPTESAVLQFR  200 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCcceeeCCc---EEEEEecCCCeEEEEEeccCCCCCC----cccccceEEEEE
Confidence            3456889998  999999999999999887766543   222122 223334333222111111    122234568999


Q ss_pred             eCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEE
Q 029305           90 CENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIE  133 (195)
Q Consensus        90 v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iE  133 (195)
                      |.++.++...|-.-=.++     .++.|     -..|||||.|=
T Consensus       201 V~~igqLvpLLPnpc~PI-----S~~rW-----qT~D~DGNkIL  234 (236)
T PF15067_consen  201 VEDIGQLVPLLPNPCSPI-----SETRW-----QTEDYDGNKIL  234 (236)
T ss_pred             ecchhhhcccCCCCcccc-----cCCcc-----eeeCCCCCEec
Confidence            999999877662211111     12223     47899999874

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=95.92  E-value=0.018  Score=39.57  Aligned_cols=92  Identities=21%  Similarity=0.220  Sum_probs=43.9

Q ss_pred             ccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeC-
Q 029305           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE-   91 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~-   91 (195)
                      .+..+.|+|.| +++.+||+++||-+..                  ..+.+.+..+++-.. .+ ...=++..+-|.|+ 
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~~~~~------------------~~l~f~ea~G~DL~~-~~-~~twDLe~Lkf~V~~   63 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFGGQLP------------------FFLTFQEAQGPDLTI-EN-NETWDLEMLKFQVPK   63 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---HHHT------------------TTEEEEE---CCGSS--T-TSBSSEEEEEEEES-
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccccCCC------------------ceEEEeeccCCcccc-CC-CcEEeeEEEEEEecC
Confidence            35679999999 8899999998862211                  122233333332111 11 33446778889998 


Q ss_pred             --CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEE
Q 029305           92 --NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIE  133 (195)
Q Consensus        92 --dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iE  133 (195)
                        |+.++.+++.+.++-+...     +   +.+...||.|..|-
T Consensus        64 ~~Dl~~L~~~le~~~~fidKk-----~---k~l~~~Dps~IElW   99 (101)
T PF14507_consen   64 DFDLAALKSHLEEQEFFIDKK-----E---KFLVTSDPSQIELW   99 (101)
T ss_dssp             S--HHHHHHHTTTS-EE--TT---------SEEEEE-TTS-EEE
T ss_pred             cccHHHHHHHhcccceEecCC-----c---eEEEEECCcceEEE
Confidence              7899999998855433221     1   57888999886553

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=94.90  E-value=0.67  Score=32.64  Aligned_cols=96  Identities=19%  Similarity=0.275  Sum_probs=50.1

Q ss_pred             CCHHHHHHHHHhccCCeEeecCCCCC-----CCc-c-EEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCC--
Q 029305           22 RSVEASLDFYQNVLGFFPIRRPGSFD-----FDG-A-CRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN--   92 (195)
Q Consensus        22 ~dl~~s~~FY~~~LG~~~~~~~~~~~-----~~~-~-~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~d--   92 (195)
                      .+.++|.+||+++||-..+......+     ... . ...+..+ +..++..+..+.      ........+++.+++  
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~-g~~lm~~D~~~~------~~~~~~~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIG-GQKLMASDGGPD------FPFGNNISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEET-TEEEEEEEESTS----------TTEEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEEC-CeEEEEECCCCC------CCCCCcEEEEEEcCCHH
Confidence            58999999999999943322211110     011 1 1122222 233333332211      112234678888885  


Q ss_pred             -HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEE
Q 029305           93 -MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  135 (195)
Q Consensus        93 -l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~  135 (195)
                       ++.++++|.+-|-           +....-.+.|.-|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~-----------~~~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ-----------WFSRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE-----------TCCEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC-----------ccceeEEEEeCCCCEEEeC
Confidence             5667778876664           1125668999999999875

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=94.85  E-value=0.12  Score=39.62  Aligned_cols=92  Identities=11%  Similarity=-0.006  Sum_probs=57.3

Q ss_pred             CceEEEEEeC--CHHHHHHHHHh-CCCeEecccee-cCCcceEEEEEECCCC-CEEEEEecCCCCCCCCCCcchhhcccc
Q 029305           82 KDNHISFQCE--NMAIVERRLKE-MKIDYVKSRVE-EGGINVDQLFFHDPDG-SMIEICNCDVLPVVPLAGDAVRIRSCT  156 (195)
Q Consensus        82 g~~Hiaf~v~--dl~~~~~~l~~-~gv~~~~~~~~-~~~~~~~~~~~~DPdG-n~iEi~~~~~~~~~p~~~~~~~~~~~~  156 (195)
                      ++.|+++.|+  |++.+.+...+ .|.+....... ....+....++..|+| ..++|.+...    +. .         
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~----~~-~---------   68 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPAS----GK-R---------   68 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCC----CC-C---------
Confidence            4789999999  99999988765 78876553321 1112346677888765 4577775321    00 0         


Q ss_pred             cccchhhhhhhhhhcCCCCCCCccccccccccc
Q 029305          157 STVNCNFHQQQIQQEPQINPQSCLSDSIHAKED  189 (195)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (195)
                        .+.-.-.-.....+.++|+.|.++||.++.+
T Consensus        69 --~s~~~~fl~~~~G~Gv~HIAf~vdDI~~~~~   99 (191)
T cd07250          69 --KSQIQEFLEYYGGAGVQHIALATDDIFATVA   99 (191)
T ss_pred             --ccHHHHHHHHhCCCceeEEEEECCCHHHHHH
Confidence              0100111112235899999999999988765

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.69  E-value=2.1  Score=29.21  Aligned_cols=57  Identities=11%  Similarity=0.130  Sum_probs=39.6

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           82 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ++.|+++.|+|+++..+...+ .|.++......... ....+.+..+++..+|+.....
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~i~l~~~~~   60 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPER-GSYKLDLLLNGGYQLELFSFPN   60 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCC-CcEEEEEecCCCcEEEEEEcCC
Confidence            578999999999999998875 79987654322221 1123445566778899886543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=92.23  E-value=1.9  Score=29.55  Aligned_cols=58  Identities=16%  Similarity=0.260  Sum_probs=39.6

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECC---CCCEEEEEecCC
Q 029305           82 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDP---DGSMIEICNCDV  139 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DP---dGn~iEi~~~~~  139 (195)
                      |+.|+++.|+|+++..+-..+ .|.+.........+.....+++.+.   .|..++++....
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   62 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPD   62 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCC
Confidence            468999999999999998875 6988765432112111234555554   677899987644

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=91.60  E-value=2.4  Score=31.42  Aligned_cols=88  Identities=13%  Similarity=0.107  Sum_probs=52.6

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-CCCeEeccce---ec------------C-Cc-ceEEEEEECCCCCEEEEEecCCCCC
Q 029305           81 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRV---EE------------G-GI-NVDQLFFHDPDGSMIEICNCDVLPV  142 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~---~~------------~-~~-~~~~~~~~DPdGn~iEi~~~~~~~~  142 (195)
                      .++.|+++.|.|+++..+--.+ .|.++...+.   ..            + .+ .....++..++|..||+++..... 
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~-   81 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQE-   81 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCC-
Confidence            3689999999999999998876 6887642210   00            0 11 134566766788899999975421 


Q ss_pred             CCCCC-----cchhhcccccccchhhhhhhhhh
Q 029305          143 VPLAG-----DAVRIRSCTSTVNCNFHQQQIQQ  170 (195)
Q Consensus       143 ~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~  170 (195)
                      .|...     .|..-... ..-|++...++++.
T Consensus        82 ~~~~~~~~~~~g~~Hla~-~v~dida~~~~l~~  113 (162)
T TIGR03645        82 NPEDNFEYWKTGVFHFCV-QDPDVEGLAERIVA  113 (162)
T ss_pred             CCCcccccccccceEEEE-EcCCHHHHHHHHHH
Confidence            12211     22222222 33467777766554

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.59  E-value=2.4  Score=30.10  Aligned_cols=57  Identities=18%  Similarity=0.370  Sum_probs=39.5

Q ss_pred             CceEEEEEeCCHHHHHHHHHhCCCeEeccceecC----------CcceEEEEEECCCC-CEEEEEecC
Q 029305           82 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEG----------GINVDQLFFHDPDG-SMIEICNCD  138 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~----------~~~~~~~~~~DPdG-n~iEi~~~~  138 (195)
                      ++.|+++.|.|+++..+...+.|.++.......+          +......++..|+| ..||+.+..
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~   70 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFLELGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFH   70 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHHHcCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEec
Confidence            5789999999999999988889987754431111          11234556666665 589999853

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=90.44  E-value=1.5  Score=28.82  Aligned_cols=46  Identities=13%  Similarity=0.200  Sum_probs=36.6

Q ss_pred             CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           92 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        92 dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +.+++.+.|.+.|+.+..-...+++  .+.+...|.||+.+||.-++.
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g--~yev~~~~~dG~~~ev~vD~~   75 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDG--CYEVEARDKDGKKVEVYVDPA   75 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCC--EEEEEEEECCCCEEEEEEcCC
Confidence            7899999999999977665543343  268889999999999998644

This is family M4 in the peptidase classification.

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=90.36  E-value=0.48  Score=35.62  Aligned_cols=53  Identities=11%  Similarity=0.220  Sum_probs=30.0

Q ss_pred             ceEEEEEeCCHHHHHHHH-HhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           83 DNHISFQCENMAIVERRL-KEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        83 ~~Hiaf~v~dl~~~~~~l-~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +.|+.+.|+|++++.+++ +..|..+....... ++|.....+.=+|| .|||+..
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~-~~GT~N~li~f~~~-YlEli~i   54 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHP-GWGTANALIPFGDG-YLELIAI   54 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-T-TT-EEEEEEE-SSS-EEEEEEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCC-CCccEEEEEeeCCc-eEEEEEe
Confidence            469999999999999999 78899988765433 22334433334777 9999995

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.58  E-value=3.3  Score=27.36  Aligned_cols=83  Identities=6%  Similarity=0.058  Sum_probs=47.1

Q ss_pred             ceEEEEEeCCHHHHHHHHH-hCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccch
Q 029305           83 DNHISFQCENMAIVERRLK-EMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNC  161 (195)
Q Consensus        83 ~~Hiaf~v~dl~~~~~~l~-~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~~  161 (195)
                      +.|+++.|+|+++..+-.. -.|......+...    ....++..+++..++|.........+... +.....+...-|+
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~----~~~~~~~~~~~~~i~l~~~~~~~~~~~~~-~~~~~~~~~v~d~   75 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL----FPGAWLYAGDGPQLHLIEEDPPDALPEGP-GRDDHIAFRVDDL   75 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC----CCceEEEeCCCcEEEEEecCCCccccCCC-cccceEEEEeCCH
Confidence            4699999999999998886 5688766543211    12345665666688988754432111111 1111122133456


Q ss_pred             hhhhhhhhh
Q 029305          162 NFHQQQIQQ  170 (195)
Q Consensus       162 ~~~~~~~~~  170 (195)
                      +++.++++.
T Consensus        76 ~~~~~~l~~   84 (114)
T cd07245          76 DAFRARLKA   84 (114)
T ss_pred             HHHHHHHHH
Confidence            666665543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=89.42  E-value=1.3  Score=28.98  Aligned_cols=52  Identities=12%  Similarity=0.200  Sum_probs=38.2

Q ss_pred             EEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCC
Q 029305           85 HISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL  140 (195)
Q Consensus        85 Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~  140 (195)
                      |+.+.+.|+++..+-..+ .|.+....... .  .....++.++ +..|+|....+.
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~-~--~~~~~~~~~~-~~~i~l~~~~~~   53 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN-G--GAEFAVLGLG-GTRLELFEGDEP   53 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc-C--CEEEEEEecC-CceEEEecCCCC
Confidence            789999999999999987 89887765521 1  1245566655 899999986553

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=86.89  E-value=2.2  Score=31.19  Aligned_cols=57  Identities=7%  Similarity=0.091  Sum_probs=35.3

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecC--CcceEEEEEE-CCCCCEEEEEe
Q 029305           80 NPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEG--GINVDQLFFH-DPDGSMIEICN  136 (195)
Q Consensus        80 ~~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~--~~~~~~~~~~-DPdGn~iEi~~  136 (195)
                      ..++.|+++.|+|+++..+-..+ .|.++........  +......|+. ++++..+++..
T Consensus         7 ~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~   67 (154)
T cd07237           7 DQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAE   67 (154)
T ss_pred             CCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEc
Confidence            45789999999999999988876 7888754321110  0011233333 44556676644

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=85.11  E-value=9.2  Score=28.12  Aligned_cols=52  Identities=10%  Similarity=0.105  Sum_probs=35.8

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEEC-CCCCEEEEEecC
Q 029305           82 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHD-PDGSMIEICNCD  138 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~D-PdGn~iEi~~~~  138 (195)
                      |+.|+++.|+|+++..+-..+ .|.++....   .+  ...++..+ .+|..|++....
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~---~~--~~~~~~~~~~~~~~l~l~~~~   54 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEE---GD--RVRLEEGGGGPGAVVDVLEEP   54 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeee---CC--EEEEEecCCCCCCEEEEEeCC
Confidence            578999999999999998865 588876543   11  11222222 358899998853

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=84.84  E-value=9.8  Score=25.73  Aligned_cols=55  Identities=11%  Similarity=0.181  Sum_probs=36.8

Q ss_pred             ceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCC---CCEEEEEecC
Q 029305           83 DNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPD---GSMIEICNCD  138 (195)
Q Consensus        83 ~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPd---Gn~iEi~~~~  138 (195)
                      +.|+++.|+|+++..+-..+ .|.++........+ ....+++..++   +..+++....
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~l~~~~   59 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEG-KFTLVFLGYPDEDSEGVLELTYNW   59 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCC-ceEEEEecCCCCCCccEEEEEecC
Confidence            46999999999999999876 59887654322211 11334555554   5789987653

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=83.76  E-value=10  Score=26.11  Aligned_cols=52  Identities=12%  Similarity=0.159  Sum_probs=36.7

Q ss_pred             CceEEEEEeCCHHHHHHHHHhC----CCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           82 KDNHISFQCENMAIVERRLKEM----KIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~~----gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ++.|+.+.|+|+++..+-..+.    |.++....  ..    ...|+...++..+++.....
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~--~~----~~~~~~~~~~~~i~l~~~~~   56 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEW--ED----GRSWRAGDGGTYLVLQQADG   56 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEee--cc----CceEEecCCceEEEEEeccc
Confidence            4789999999999998887764    88876543  11    13344435678899987554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=82.98  E-value=1  Score=33.55  Aligned_cols=28  Identities=18%  Similarity=0.145  Sum_probs=24.8

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCe
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFF   38 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~   38 (195)
                      .+++.|+.|.+++..+...||..+||++
T Consensus        40 ytr~~gm~l~~~~~fke~~Fsl~fL~~~   67 (170)
T KOG2944|consen   40 YTRVNGMALLVPDDFKEAKFSLYFLGAE   67 (170)
T ss_pred             hhhhccceeechhhhhHhhhHHHhhccc
Confidence            5678899999999999999999999986

>PRK11700 hypothetical protein; Provisional

Probab=82.39  E-value=18  Score=27.79  Aligned_cols=75  Identities=19%  Similarity=0.232  Sum_probs=45.1

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec-------CcEEEEeeeCCCCCCCCCCCCCCCCce
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY-------GMGIHLLKSEEPDNLPKAGKNINPKDN   84 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-------g~~~~ll~~~~~~~~~~~~~~~~~g~~   84 (195)
                      -.++||.|+|++.+.+.+|-+..+..-..-........... ++..       +..+..++.+-+..    ......|.-
T Consensus        38 ~~~DHialR~n~~~tAe~w~~~l~~~G~llSen~INGRPI~-l~~L~qPl~~~~w~I~cvELP~P~~----k~Yp~eGWE  112 (187)
T PRK11700         38 LEADHIALRCNQNETAERWRQGFLQCGELLSENIINGRPIC-LFELDQPLQVGHWSIDCVELPYPGE----KRYPHEGWE  112 (187)
T ss_pred             ccCcEEEEeeCCHHHHHHHHHHHHHhchhhhccccCCeeEE-EEEcCCCceeCCcEEEEEEeCCCCC----CCCCCCCce
Confidence            46899999999999999999886654322211101111122 3322       23455555543321    125667899


Q ss_pred             EEEEEeC
Q 029305           85 HISFQCE   91 (195)
Q Consensus        85 Hiaf~v~   91 (195)
                      |+-+.++
T Consensus       113 HIElVlp  119 (187)
T PRK11700        113 HIELVLP  119 (187)
T ss_pred             EEEEEec
Confidence            9999999

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=82.31  E-value=7.6  Score=26.50  Aligned_cols=55  Identities=11%  Similarity=0.097  Sum_probs=37.0

Q ss_pred             ceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           83 DNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        83 ~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      +.|+++.|+|+++..+...+ .|...........+...+..++. .+|..++|+...
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~l~l~~~~   56 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLG-LGNVQIELIEPL   56 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEE-cCCEEEEEEEEC
Confidence            36999999999999998876 78887654322101112344444 478889999753

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=82.23  E-value=13  Score=25.16  Aligned_cols=54  Identities=11%  Similarity=0.174  Sum_probs=35.6

Q ss_pred             ceEEEEEeCCHHHHHHHHHh-CCCeEeccce-ecCCcceEEEEEECCCCCEEEEEecC
Q 029305           83 DNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        83 ~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~-~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      +.|+++.|+|+++..+-..+ .|.+...... +..+  ....|+.-.+|..+++++..
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~   57 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKG--FESYFLSFDDGARLELMTRP   57 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCC--ceEEEEecCCCcEEEEEcCc
Confidence            57999999999999987776 5877643211 1122  12334544577889999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=81.15  E-value=14  Score=24.88  Aligned_cols=57  Identities=12%  Similarity=0.158  Sum_probs=38.8

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-CCCeEeccce-ecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           82 KDNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~-~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      |+.|+++.|.|+++..+-..+ .|.++..... ..........++.. .+..+++.....
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   59 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRI-GEGHIELFLNPS   59 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEES-TSSCEEEEEEES
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecc-cccceeeeeecc
Confidence            478999999999999998876 6999887664 12222223444444 445677777544

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=80.73  E-value=6.9  Score=28.52  Aligned_cols=27  Identities=7%  Similarity=0.083  Sum_probs=22.3

Q ss_pred             ceEEEEEeCCHHHHHHHHH-hCCCeEec
Q 029305           83 DNHISFQCENMAIVERRLK-EMKIDYVK  109 (195)
Q Consensus        83 ~~Hiaf~v~dl~~~~~~l~-~~gv~~~~  109 (195)
                      +.|+++.|+|+++..+... ..|.++..
T Consensus         2 i~Hv~l~V~Dle~a~~FY~~~LG~~~~~   29 (153)
T cd07257           2 LGHVVLEVPDFAASFDWYTETFGLKPSD   29 (153)
T ss_pred             ccEEEEecCCHHHHHHHHHHhcCCeEEe
Confidence            5799999999999988775 47887654

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07268 Glo_EDI_BRP_like_4 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=80.01  E-value=21  Score=26.28  Aligned_cols=73  Identities=15%  Similarity=0.178  Sum_probs=44.1

Q ss_pred             cceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec-------CcEEEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY-------GMGIHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus        14 i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-------g~~~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      ++||.|+|++.+.+.+|-+.++..-..-........... ++..       +..+..++..-+.    .......|.-|+
T Consensus         2 ~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~-l~~L~qPl~~~~~~I~cvELP~P~----~k~Yp~eGWEHI   76 (149)
T cd07268           2 IDHIALRVNENQTAERWKEGLLQCGELLSENEINGRPIA-LIKLEKPLQFAGWSISIVELPFPK----DKKYPQEGWEHI   76 (149)
T ss_pred             CceEEEeeCCHHHHHHHHHHHHHhchhhhccccCCeeEE-EEEcCCCceeCCcEEEEEEeCCCC----CCCCCCCCceEE
Confidence            689999999999999999887754322211111111111 3322       2345555554332    112566789999


Q ss_pred             EEEeC
Q 029305           87 SFQCE   91 (195)
Q Consensus        87 af~v~   91 (195)
                      -+.++
T Consensus        77 E~Vlp   81 (149)
T cd07268          77 EIVIP   81 (149)
T ss_pred             EEEec
Confidence            99998

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	195
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	4e-31
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	3e-30
3ghj_A	141	Putative integron gene cassette protein; integron	3e-29
2p25_A	126	Glyoxalase family protein; structural genomics, MC	7e-29
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	4e-28
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	1e-26
1nki_A	135	Probable fosfomycin resistance protein; potassium	2e-26
3huh_A	152	Virulence protein STM3117; structural genomics, ny	3e-26
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	8e-26
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-25
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	7e-25
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-23
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	1e-21
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	2e-21
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	5e-21
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	3e-20
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	5e-19
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	5e-17
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	8e-16
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	2e-14
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	5e-14
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	5e-09
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	5e-14
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	7e-14
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	2e-13
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	2e-13
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	3e-08
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	3e-13
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	5e-13
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	9e-13
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	2e-12
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-12
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	6e-12
2i7r_A	118	Conserved domain protein; structural genomics cons	1e-11
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	3e-11
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	6e-11
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	7e-11
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	9e-11
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	4e-10
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	6e-10
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	1e-09
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-09
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	3e-09
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	4e-09
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	8e-09
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	9e-09
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	1e-08
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	1e-08
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	8e-08
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	2e-07
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	1e-06
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	7e-06
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	2e-06
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	2e-06
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	1e-04
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	3e-06
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	3e-05
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	3e-06
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	2e-05
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	6e-06
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	7e-06
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-05
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	8e-05
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	1e-05
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	1e-04
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	3e-05
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	5e-05
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	4e-05
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	7e-05
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	4e-04
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	9e-05
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	2e-04
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	2e-04
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	5e-04
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	8e-04

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score =  109 bits (274), Expect = 4e-31
 Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 11/124 (8%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           L+SLNH++L    ++ S+ F+  +LG     R  +  +     L    + + L   E   
Sbjct: 2   LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTGAY-----LTCGDLWVCLSYDEARQ 56

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS 130
            +P   +  +      +   E+   + +RL++  +   K    EG       +F DPDG 
Sbjct: 57  YVP--PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEG----ASFYFLDPDGH 110

Query: 131 MIEI 134
            +E+
Sbjct: 111 KLEL 114

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score =  106 bits (267), Expect = 3e-30
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 14/126 (11%)

Query: 11  LKSLNHISLVC--RSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEE 68
           ++ ++H+ +       E +  FY   +G   I +P      G C        IH+    E
Sbjct: 8   IQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQEIHI--GVE 65

Query: 69  PDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPD 128
            +  P        K  H +F    +   ++ L +  I+ +          V + +  DP 
Sbjct: 66  QNFNP-------AKRAHPAFYVLKIDEFKQELIKQGIEVIDDHARPD---VIRFYVSDPF 115

Query: 129 GSMIEI 134
           G+ IE 
Sbjct: 116 GNRIEF 121

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score =  104 bits (262), Expect = 3e-29
 Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 15/131 (11%)

Query: 7   NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKS 66
            P+ +K L  +++  +++E S  FY  +LGF       +  ++    L+  G    ++  
Sbjct: 22  VPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNF---LWVSGRAGMVVLQ 78

Query: 67  EEPDNLPKAGKNINPKDNHISFQCENMAI--VERRLKEMKIDYVKSRVEEGGINVDQLFF 124
           EE +         N +  H SF+ E   I  +++ L+   +  V   V +  +    L+F
Sbjct: 79  EEKE---------NWQQQHFSFRVEKSEIEPLKKALESKGVS-VHGPVNQEWMQAVSLYF 128

Query: 125 HDPDGSMIEIC 135
            DP+G  +E  
Sbjct: 129 ADPNGHALEFT 139

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  103 bits (258), Expect = 7e-29
 Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 4/126 (3%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDG-ACRLFNYGMGIHLLKSEEP 69
            K ++H+++   + +A+ +FY   LGF  +R     + +     L      + +      
Sbjct: 3   FKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIF--ISD 60

Query: 70  DNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDG 129
               +          H++F+ E++  V   L E  I+    RV++        FF DPDG
Sbjct: 61  QFPARPSYPEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTG-KKMTFFFDPDG 119

Query: 130 SMIEIC 135
             +E+ 
Sbjct: 120 LPLELH 125

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score =  102 bits (255), Expect = 4e-28
 Identities = 34/148 (22%), Positives = 54/148 (36%), Gaps = 13/148 (8%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS--------FDFDGAC 52
              SV  P  L+ ++HI+L  + ++AS  FY  +LG   +                  A 
Sbjct: 7   SVNSVLAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVAN 66

Query: 53  RLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAI--VERRLKEMKIDYVKS 110
            +   G  + L    E        +    +  H++F  +          + E KI     
Sbjct: 67  FITPDGTILDLFGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHG 126

Query: 111 RVEEGGINVDQLFFHDPDGSMIEICNCD 138
            V         ++F+DPDG MIEI  CD
Sbjct: 127 PVTRPTG--RGVYFYDPDGFMIEIR-CD 151

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 97.2 bits (242), Expect = 2e-26
 Identities = 32/126 (25%), Positives = 47/126 (37%), Gaps = 18/126 (14%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           L  LNH++L    + AS+ FY+++LGF    R     +         G     L  E   
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAY------LELGSLWLCLSREPQY 55

Query: 71  NLPKAGKNINPKDNHISFQC--ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPD 128
             P A         H +F     + A    +L+   +   K    EG    D  +F DPD
Sbjct: 56  GGPAADY------THYAFGIAAADFARFAAQLRAHGVREWKQNRSEG----DSFYFLDPD 105

Query: 129 GSMIEI 134
           G  +E 
Sbjct: 106 GHRLEA 111

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 97.4 bits (242), Expect = 3e-26
 Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 8/137 (5%)

Query: 2   KESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGI 61
           K      + +  ++H+ L    +  ++ FY+ VLGF  +             L      I
Sbjct: 12  KHHESIQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK-----QNRKALIFGAQKI 66

Query: 62  HLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGI--NV 119
           +L + E     PKA +      +        +  V   + +  I  V+  VE  G    +
Sbjct: 67  NLHQQEME-FEPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEI 125

Query: 120 DQLFFHDPDGSMIEICN 136
             ++  DPDG++IEI  
Sbjct: 126 MSIYIRDPDGNLIEISQ 142

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 95.7 bits (238), Expect = 8e-26
 Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 10/126 (7%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           +  L+HI+L+ + +  +  F QN+     I   G   F  + +   + +    +   E D
Sbjct: 2   ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLS-KEKFFLIAGLWICIMEGD 60

Query: 71  NLPKAGKNINPKDNHISFQC--ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPD 128
           +L +         NHI+FQ   E +     R+K + ++    R    G     ++F+D D
Sbjct: 61  SLQE------RTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQG-EGRSIYFYDFD 113

Query: 129 GSMIEI 134
             + E+
Sbjct: 114 NHLFEL 119

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 94.0 bits (234), Expect = 3e-25
 Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 8/128 (6%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           L  ++H+SL  R ++ S  +Y  +L +  + R        A  +   G+ I L   E   
Sbjct: 3   LSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLPGGLSIVLR--EHDG 60

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHDP 127
                     P  +H+SF  E+M  ++    RL +    +  ++    G     L F D 
Sbjct: 61  GGTDLFDETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFTPTQELPFG---WILAFRDA 117

Query: 128 DGSMIEIC 135
           D   +E  
Sbjct: 118 DNIALEAM 125

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 93.4 bits (232), Expect = 7e-25
 Identities = 23/133 (17%), Positives = 52/133 (39%), Gaps = 11/133 (8%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           ++ L+H++ + R +E      + V     +    +  F  + R   + +G   +   + +
Sbjct: 2   IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLS-REKFFLIGDIWVAIMQGE 60

Query: 71  NLPKAGKNINPKDNHISFQC--ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPD 128
            L +         NHI+F+    +      R+ ++ +D    R    G     ++F+D D
Sbjct: 61  KLAERS------YNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEG-EGRSIYFYDDD 113

Query: 129 GSMIEICNCDVLP 141
             M E+ +   L 
Sbjct: 114 NHMFEL-HTGTLT 125

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 90.4 bits (224), Expect = 1e-23
 Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 6/129 (4%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           +  L+++++  R + A   FYQ V GF  I    S  F G        +G +  ++ E  
Sbjct: 6   MADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGL-DTGKSCIGFNAHEAYELM 64

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGINVDQLFFHDP 127
            L +     +     ++F  +    V++            +K+  E    +  Q    DP
Sbjct: 65  QLAQ-FSETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDP 122

Query: 128 DGSMIEICN 136
           + ++  I N
Sbjct: 123 ERNVFRINN 131

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 84.6 bits (209), Expect = 1e-21
 Identities = 26/131 (19%), Positives = 55/131 (41%), Gaps = 10/131 (7%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           +  L+H+ L    +  + +FY+ VLG   +         G   L      I+L +     
Sbjct: 8   ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG-----AGRIALEFGHQKINLHQLGNEF 62

Query: 71  NLPKAGKNINPKDNHISFQCE-NMAIVERRLKEMKIDYVKSRVEEGGIN--VDQLFFHDP 127
             PKA +N+      + F  +  ++   + +++  +  ++  V+  G    +   +F DP
Sbjct: 63  E-PKA-QNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDP 120

Query: 128 DGSMIEICNCD 138
           DG++IE+    
Sbjct: 121 DGNLIEVSTYS 131

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 84.5 bits (209), Expect = 2e-21
 Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 8/134 (5%)

Query: 6   ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLK 65
           EN      L+H+ +    +E S+ F+  +LG        S+      + + +G    +  
Sbjct: 13  ENLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRG---KSYKHGKTYLVFV 69

Query: 66  SEEPDNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVE--EGGINVD 120
             E               NH++F   +   V+    +LKE     +        GG N  
Sbjct: 70  QTEDRFQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHY 129

Query: 121 QLFFHDPDGSMIEI 134
            +F  DP+   +EI
Sbjct: 130 AVFCEDPNRIKVEI 143

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 84.0 bits (207), Expect = 5e-21
 Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 10/139 (7%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG 60
            +      + ++ L+HI +  +S++ +  FY  +LG   +        +    L      
Sbjct: 15  TENLYFQSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTF-----KEDRKALCFGDQK 69

Query: 61  IHLLKSEEPDNLPKAGKNINPKDNHISFQCE-NMAIVERRLKEMKIDYVKSRVEEGGI-- 117
            +L +  +    PKA  +  P    I    E  +  + + LK   +   +  V   G   
Sbjct: 70  FNLHEVGKEFE-PKA-AHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKG 127

Query: 118 NVDQLFFHDPDGSMIEICN 136
            +  ++F DPD ++IE+ N
Sbjct: 128 PIMSIYFRDPDRNLIEVSN 146

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 81.3 bits (201), Expect = 3e-20
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 10/133 (7%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD--------GACRLFNYGMGIH 62
           LK+++H++L+    + S +FY N LGF  IR                G   L  +G  + 
Sbjct: 3   LKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLT 62

Query: 63  LLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQL 122
                 P       +       H++F  E++    + L  + I   + R ++        
Sbjct: 63  DSNYCAPPERISWPRE-ACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKK-MA 120

Query: 123 FFHDPDGSMIEIC 135
           FF DPDG  +E+ 
Sbjct: 121 FFFDPDGLPLELH 133

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 78.7 bits (194), Expect = 5e-19
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 14/133 (10%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
             ++   +L    ++A+  FY++V G   + +       G    F  G  + LL   +  
Sbjct: 6   PSAIMETALYADDLDAAEAFYRDVFGLEMVLK-----LPGQLVFFKCGRQMLLLFDPQES 60

Query: 71  NLPKAGKNINPKD----NHISFQCENMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLF 123
           +   A   I         H  F  ++ A V+    R + ++I          G     ++
Sbjct: 61  SRADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGS--YSVY 118

Query: 124 FHDPDGSMIEICN 136
             DP G+ +E+  
Sbjct: 119 IRDPAGNSVEVGE 131

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 72.4 bits (178), Expect = 5e-17
 Identities = 26/127 (20%), Positives = 43/127 (33%), Gaps = 25/127 (19%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPG---SFDFDGACRLFNYGMGIHLLKSEEPD 70
           + H++L    V A+ +F +   G       G   +   D        G  + L+K +E  
Sbjct: 4   IKHLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDND------GFILTLMKGKEVQ 57

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGINVDQLFFHDP 127
                     PK  H+ F  E+   V++   RLKE        +           +   P
Sbjct: 58  ---------YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHA----YTFYVEAP 104

Query: 128 DGSMIEI 134
            G  IE+
Sbjct: 105 GGFTIEV 111

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 69.9 bits (171), Expect = 8e-16
 Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 11/125 (8%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD--- 70
             +     R +  S  FY++ LG   +         G+  LF  G  IH  +S E     
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKILED------FGSFVLFETGFAIHEGRSLEETIWR 62

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS 130
               A +    ++  + F+  ++    + +    ++ +     +         F+DPDG 
Sbjct: 63  TSSDAQEAYGRRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAW-GQRVFRFYDPDGH 120

Query: 131 MIEIC 135
            IE+ 
Sbjct: 121 AIEVG 125

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 67.4 bits (164), Expect = 2e-14
 Identities = 30/154 (19%), Positives = 56/154 (36%), Gaps = 26/154 (16%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRR----PGSFDF----------------DGACR 53
           L    L  +  + SLDFY  VLG   +++       F                  +    
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAW 91

Query: 54  LFNYGMGIHLLKSEEPDNLPKAGKNINPKD----NHISFQCENMAIVERRLKEMKIDYVK 109
            F+    + L  +   ++      +    D     HI     ++    +R +E+ + +VK
Sbjct: 92  TFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 151

Query: 110 SRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVV 143
            + ++G +     F  DPDG  IEI N + +  +
Sbjct: 152 -KPDDGKMK-GLAFIQDPDGYWIEILNPNKIATI 183

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 68.2 bits (166), Expect = 5e-14
 Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 10/139 (7%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLF---NYGMGIHLLKSE 67
              ++HI+ +    + + DFY  VLG   +++  +FD  G   L+     G    ++   
Sbjct: 6   TMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFF 65

Query: 68  EPDNLPKAGKNINPKDNHISFQ--CENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFH 125
                 + G   + +    S+      MA  E+RL++  + Y  +++E  G     + F 
Sbjct: 66  PWAGARQ-GVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPY--TKIERFGEQY--VEFD 120

Query: 126 DPDGSMIEICNCDVLPVVP 144
           DP G  +EI   +      
Sbjct: 121 DPHGLHLEIVEREEGEANT 139

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 53.6 bits (128), Expect = 5e-09
 Identities = 19/136 (13%), Positives = 42/136 (30%), Gaps = 31/136 (22%)

Query: 12  KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS---FDFDGACRLFNYGMGIHLLKSEE 68
           K     +L+    + + D  +N++G   + + G    +   G     + G  I L  +  
Sbjct: 152 KGFGGATLLSEQPDKTADLLENIMGLERVGKEGDFVRYRSAG-----DIGNVIDLKLTPI 206

Query: 69  PDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ------- 121
                 AG       +HI+++  +                +  +   G  V         
Sbjct: 207 GRGQMGAG-----TVHHIAWRANDDEDQLD---------WQRYIASHGYGVTPVRDRNYF 252

Query: 122 --LFFHDPDGSMIEIC 135
             ++F +    + EI 
Sbjct: 253 NAIYFREHGEILFEIA 268

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 64.6 bits (157), Expect = 5e-14
 Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 5/124 (4%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLP 73
           + H++L   ++E    FY    G        +          ++  G  L      D   
Sbjct: 4   IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTG 63

Query: 74  KAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS 130
           K     N    HI+        V+    +L++     +       G    +    DP+G+
Sbjct: 64  KTTGE-NLGWAHIAISTGTKEAVDELTEKLRQDGFA-IAGEPRMTGDGYYESVVLDPEGN 121

Query: 131 MIEI 134
            IEI
Sbjct: 122 RIEI 125

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 64.8 bits (158), Expect = 7e-14
 Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG-IHLLKSEEP 69
           L  LNH+++    +E +  FY+N+LG          +   +    N G   + LL     
Sbjct: 3   LGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGL 62

Query: 70  D--NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFH-- 125
           D        KN     +HI  + +N+      LK+ KI  +   V+ G      +F H  
Sbjct: 63  DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPK 122

Query: 126 DPDGSMIEIC 135
           D  G ++E+ 
Sbjct: 123 DCGGVLVELE 132

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 63.5 bits (154), Expect = 2e-13
 Identities = 25/127 (19%), Positives = 44/127 (34%), Gaps = 15/127 (11%)

Query: 13  SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNL 72
             +   L   +  AS  FY+ +LG  P+    +F        F    G+ L         
Sbjct: 25  HPDFTILYVDNPPASTQFYKALLGVDPVESSPTFSL------FVLANGMKLGLWSRHTVE 78

Query: 73  PKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-GINVDQLFFHDPD 128
           PKA  ++      ++F+ EN A V+      K   +  ++   +   G         DPD
Sbjct: 79  PKA--SVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYT---FTAADPD 133

Query: 129 GSMIEIC 135
              + + 
Sbjct: 134 SHRLRVY 140

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 66.2 bits (161), Expect = 2e-13
 Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 12/135 (8%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIH----LLKS 66
           +K  +HIS+V ++   +  FY+NVLG   ++   + D      LF YG         L  
Sbjct: 28  IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLF-YGDKTGSPGTELSF 86

Query: 67  EEPDNLPKAGKNINPKDNHISFQ---CENMAIVERRLKEMKIDYVKSRVEEGGINVDQLF 123
            E   + +           I       +++   + R ++  + + +            L 
Sbjct: 87  FEIPLVGR-TYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSE-MTTYANRPA--LQ 142

Query: 124 FHDPDGSMIEICNCD 138
           F D +G  + +   +
Sbjct: 143 FEDAEGLRLVLLVSN 157

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 51.6 bits (123), Expect = 3e-08
 Identities = 20/134 (14%), Positives = 46/134 (34%), Gaps = 30/134 (22%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGS---FDFDGACRLFNYGMGIHLLKSEEPD 70
           +  + L  R ++        + G+  + R      F              I +   + P 
Sbjct: 181 MGSVELTVRRLDKMASTLTEIFGYTEVSRNDQEAIFQSIK----GEAFGEIVVKYLDGPT 236

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINV----DQLFFH- 125
             P  G       +H++ + +N A         ++ Y + +V++ G +     D+ +F  
Sbjct: 237 EKPGRG-----SIHHLAIRVKNDA---------ELAYWEEQVKQRGFHSSGIIDRFYFKS 282

Query: 126 ----DPDGSMIEIC 135
               + +G + EI 
Sbjct: 283 LYFRESNGILFEIA 296

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 63.5 bits (154), Expect = 3e-13
 Identities = 22/128 (17%), Positives = 38/128 (29%), Gaps = 9/128 (7%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           L+ +  I+L    +EAS  FY    G+ P+     F           G  +     +   
Sbjct: 3   LQQVAVITLGIGDLEASARFYGEGFGWAPV-----FRNPEIIFYQMNGFVLATWLVQNLQ 57

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGINVDQLFFHDP 127
                     P    ++        V     RL       ++         + + +  DP
Sbjct: 58  EDVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGL-RGYVADP 116

Query: 128 DGSMIEIC 135
           DG + EI 
Sbjct: 117 DGHIWEIA 124

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 62.1 bits (151), Expect = 5e-13
 Identities = 17/129 (13%), Positives = 45/129 (34%), Gaps = 6/129 (4%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG---IHLLKSE 67
              ++HI    ++++++L  ++  LG+         +      +     G   + L+  +
Sbjct: 5   SLKVHHIGYAVKNIDSALKKFKR-LGYVEESEVVRDEVRKV-YIQFVINGGYRVELVAPD 62

Query: 68  EPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ-LFFHD 126
             D+             HI ++ E++      + ++     K       I+  +  F   
Sbjct: 63  GEDSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 127 PDGSMIEIC 135
            D  +IE+ 
Sbjct: 123 TDIGLIELL 131

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 61.6 bits (149), Expect = 9e-13
 Identities = 21/131 (16%), Positives = 38/131 (29%), Gaps = 16/131 (12%)

Query: 13  SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNL 72
           + N   +   +VE S DFY+ +    P+     +        F              +  
Sbjct: 13  TPNLQLVYVSNVERSTDFYRFIFKKEPVFVTPRY------VAFPSSGDALFAIWSGGEEP 66

Query: 73  PKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLF-----FHDP 127
                   P+ + I         V++   E        ++         +F       DP
Sbjct: 67  VAEI----PRFSEIGIMLPTGEDVDKLFNEWT-KQKSHQIIVIKEPYTDVFGRTFLISDP 121

Query: 128 DGSMIEICNCD 138
           DG +I +C  D
Sbjct: 122 DGHIIRVCPLD 132

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 62.8 bits (152), Expect = 2e-12
 Identities = 26/152 (17%), Positives = 49/152 (32%), Gaps = 21/152 (13%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           + S+  ++L    ++  L FY N+LG   +              F   +G+  ++     
Sbjct: 24  MTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQADA--------FTIQLGVSQIQFRAAA 75

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVE--RRLKEMKIDYVKS---RVEEGGINVDQLFFH 125
           +  K          HI+         E    L        ++   +      N    +  
Sbjct: 76  DGTKPF-------YHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVE 128

Query: 126 DPDGSMIE-ICNCDVLPVVPLAGDAVRIRSCT 156
           DP G++IE I      PV+     A ++ S  
Sbjct: 129 DPSGNIIELISRQQAAPVLDKPFSADQLLSIG 160

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 60.8 bits (147), Expect = 2e-12
 Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 16/128 (12%)

Query: 19  LVCRSVEASLDFYQNVLGF-FPIRRPG---SFDFDGACRLFNYGMGIHLLKSEEPDNLPK 74
           L C  +  S  F+ +VLGF     RP     +       +      +  +  +    L  
Sbjct: 11  LYCFDINVSQSFFVDVLGFEVKYERPDEEFVYLTLDGVDVM-----LEGIAGKSRKWLSG 65

Query: 75  AGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKS-------RVEEGGINVDQLFFHDP 127
             +       +  +   ++  + +R+ E   D +         +  +      Q     P
Sbjct: 66  DLEFPLGSGVNFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTP 125

Query: 128 DGSMIEIC 135
           DG +   C
Sbjct: 126 DGYLFRFC 133

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 59.9 bits (145), Expect = 6e-12
 Identities = 19/142 (13%), Positives = 46/142 (32%), Gaps = 20/142 (14%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRP--------GSFDFDGAC------RLFN 56
           L  ++++S+V  S++ ++ F++  +G     R                 C         +
Sbjct: 9   LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD 67

Query: 57  YGMGIHLLKSEEPDNLPKAGKNINPKD---NHISFQCENMAIVERRLKEMKIDYVKSRVE 113
               I L +   P       +           + F  E++  +  RL +   + V   V+
Sbjct: 68  GHSRIELSRFLTPPT-IADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQ 126

Query: 114 EGGINVDQLFFHDPDGSMIEIC 135
               +    +    +G +I + 
Sbjct: 127 YEN-SYRLCYIRGVEGILIGLA 147

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 58.3 bits (141), Expect = 1e-11
 Identities = 19/121 (15%), Positives = 37/121 (30%), Gaps = 12/121 (9%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLP 73
           LN + ++  +V       +++L          F        F  G    +L       L 
Sbjct: 6   LNQLDIIVSNVPQVCADLEHILDKKADYANDGF------AQFTIGSHCLMLSQNHLVPLE 59

Query: 74  KAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIE 133
                I      I  + E++    +RL E+ I  +           + L    P G +++
Sbjct: 60  NFQSGI-----IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAGLVLD 113

Query: 134 I 134
            
Sbjct: 114 F 114

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 57.8 bits (139), Expect = 3e-11
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 15/128 (11%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           L   N +    ++   S +FY+N+L   PI    +F       +F    G+ L    + +
Sbjct: 4   LSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSPTF------AMFVMKTGLRLGLWAQEE 57

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-GINVDQLFFHD 126
             PKA +        +SFQ  +  +V+    +  + +I  ++   +   G         D
Sbjct: 58  IEPKAHQ--TGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYT---FVGVD 112

Query: 127 PDGSMIEI 134
           PD   + I
Sbjct: 113 PDEHRLRI 120

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 57.1 bits (137), Expect = 6e-11
 Identities = 21/125 (16%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 13  SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNL 72
            + H+++  R ++ + DFY   LG    RR           L  +G  +    S+  D  
Sbjct: 9   DVFHLAIPARDLDEAYDFYVTKLGCKLARRY-----PDRITLDFFGDQLVCHLSDRWDRE 63

Query: 73  PKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYV---KSRVEEGGINVDQLFFHDPDG 129
                             ++   + +  K+  I +      R E      +  F  DP  
Sbjct: 64  V---SMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSN 120

Query: 130 SMIEI 134
           +++E 
Sbjct: 121 NLLEF 125

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 56.8 bits (137), Expect = 9e-11
 Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 10/132 (7%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF-DGACRLFNYGMG---IHLLKS 66
              L+HI +   S++  L FY   L    +      D      ++    +G   I LL+ 
Sbjct: 6   SNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGM---EDLPSQGVKIAFLEIGESKIELLEP 62

Query: 67  EEPDNLPKAGKNINPKD-NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFH 125
              ++          +  +HI+   +++    + +KE  +  +      G       F H
Sbjct: 63  LSEESPIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLH 122

Query: 126 --DPDGSMIEIC 135
                G + E C
Sbjct: 123 PRSARGVLYEFC 134

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 54.4 bits (131), Expect = 4e-10
 Identities = 20/117 (17%), Positives = 35/117 (29%), Gaps = 13/117 (11%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKN 78
           +       +  FY ++LG  P+      D        +       +              
Sbjct: 13  IATPEPARAQAFYGDILG-MPVA----MDHGWIVTHASPLEAHAQVSFAREGGSG----- 62

Query: 79  INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 135
                  +S + +N   V  R+ +  +      V E    V +LF  DP G +I I 
Sbjct: 63  --TDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINIL 116

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 54.1 bits (130), Expect = 6e-10
 Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 12/128 (9%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEP--DN 71
           ++  ++V   +  SL+FY+  LG      P   D          G       + E     
Sbjct: 5   ISLFAVVVEDMAKSLEFYR-KLGV---EIPAEADSAPHTEAVLDGGIRLAWDTVETVRSY 60

Query: 72  LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKS----RVEEGGINVDQLFFHDP 127
            P+           I+F+  + A V+++  E+     +          G         DP
Sbjct: 61  DPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY--AIVKDP 118

Query: 128 DGSMIEIC 135
           DG+++++ 
Sbjct: 119 DGNVVDLF 126

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 53.9 bits (129), Expect = 1e-09
 Identities = 21/137 (15%), Positives = 51/137 (37%), Gaps = 12/137 (8%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD-------FDGACRLFNYGMGIHL 63
              ++H++  C   + +  +YQ   G+  + R  + +          A +L  +   + +
Sbjct: 7   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 66

Query: 64  LKS---EEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 120
           +     E       A  N     +H++++ +++  V   L+E  +  +    + G     
Sbjct: 67  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 126

Query: 121 QLFFH--DPDGSMIEIC 135
             F H     G +IE+ 
Sbjct: 127 INFMHPKSGKGVLIELT 143

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 52.8 bits (126), Expect = 2e-09
 Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 5/124 (4%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNL 72
           ++  ++       +  FY   LGF                +      G  LL        
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 73  PKAGKNINPKDN--HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS 130
               K     D     SF  +++A    RL  + + + +   + G   V      D  G+
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGP--VVTAILDDTCGN 144

Query: 131 MIEI 134
           +I++
Sbjct: 145 LIQL 148

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 52.5 bits (126), Expect = 3e-09
 Identities = 19/123 (15%), Positives = 39/123 (31%), Gaps = 19/123 (15%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKN 78
           L    ++ +L  + + LG F ++    +       L   G G+ LL+      +P     
Sbjct: 13  LHIPDMQEALTLFCDTLG-FELK----YRHSNYAYLELSGCGLRLLEEPARKIIPDGIAR 67

Query: 79  INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE------GGINVDQLFFHDPDGSMI 132
           +      I     ++  +  +L     +    +VE       G     +     PDG  +
Sbjct: 68  VA-----ICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYG---QREFQVRMPDGDWL 119

Query: 133 EIC 135
              
Sbjct: 120 NFT 122

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 52.1 bits (125), Expect = 4e-09
 Identities = 20/121 (16%), Positives = 43/121 (35%), Gaps = 14/121 (11%)

Query: 16  HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKA 75
              L    +  +L+FY+ +L      R   F+      +    +   LL +   + L   
Sbjct: 9   LSRLYVADLNPALEFYEELLETPVAMR---FEIPQT-GVELAQISTILLIAGSEEALKPF 64

Query: 76  GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE-GGINVDQLFFHDPDGSMIEI 134
                  +   +F  +++   +  L+E   + ++   +   G N+        DGS+IE 
Sbjct: 65  R------NTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNM---TVRHSDGSVIEY 115

Query: 135 C 135
            
Sbjct: 116 V 116

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 51.1 bits (122), Expect = 8e-09
 Identities = 25/123 (20%), Positives = 38/123 (30%), Gaps = 16/123 (13%)

Query: 22  RSVEASLDFYQNVLGFFPIRR-PGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNIN 80
             ++  + FY+  L    I        +DG           HL   E       +   + 
Sbjct: 20  GQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVM-FGLPHADYHL---EFTQYEGGSTAPVP 75

Query: 81  PKDNHISFQCENMAIVE---RRLKEMKIDYVKSRV---EEGGINVDQLFFHDPDGSMIEI 134
             D+ + F   N   +     +LK M    V+S       GG+        DPDG  I  
Sbjct: 76  HPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGV-----TIEDPDGWRIVF 130

Query: 135 CNC 137
            N 
Sbjct: 131 MNS 133

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 50.7 bits (121), Expect = 9e-09
 Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 16/125 (12%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGF-FPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNL 72
           +  I++    ++  L FY+ ++GF F   +                  ++ +++ +   +
Sbjct: 7   ITSITINTSHLQGMLGFYR-IIGFQFTASKVDKGSEVHRAVHNGVEFSLYSIQNPQRSQI 65

Query: 73  PKAGKNINPKDNHISFQCENM-AIVERRLKEMKIDYVKS-RVEEGGINVDQLFFHDPDGS 130
           P            + FQ  ++   V+  +K      +        G    +    DPDG 
Sbjct: 66  PSL---------QLGFQITDLEKTVQELVKIPGAMCILDPTDMPDG---KKAIVLDPDGH 113

Query: 131 MIEIC 135
            IE+C
Sbjct: 114 SIELC 118

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 51.0 bits (122), Expect = 1e-08
 Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 21/148 (14%)

Query: 6   ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGA-------------- 51
           +N L +++   I +V R +E SL  Y    G    +   + D+  A              
Sbjct: 12  KNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAK 71

Query: 52  CRLFNYGMG-IHLLKSEEPDNLPKAGKNIN-PKDNHISFQCENMAIVERRLKEMKIDYVK 109
              F  G   + L++ +E  +  +   + N    +HI+F  ++M      L    +  ++
Sbjct: 72  LAFFELGPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQ 131

Query: 110 SRVEEGGINVDQLFFH--DPDGSMIEIC 135
               EGG      +         MIE+ 
Sbjct: 132 KGDFEGG---RYAYIDTLRALKVMIELL 156

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score = 50.5 bits (121), Expect = 1e-08
 Identities = 30/131 (22%), Positives = 46/131 (35%), Gaps = 20/131 (15%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF-DGACRLFNYGMG-------IHLL- 64
           L H  L    ++ S+DFY  VLG   +R     +  +    L   G G       I L  
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRT---SENPEYKYSLAFVGYGPETEEAVIELTY 59

Query: 65  -KSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLF 123
               +   L  A         HI+   +N A    ++++   +  +      G      F
Sbjct: 60  NWGVDKYELGTA-------YGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAF 112

Query: 124 FHDPDGSMIEI 134
             DPDG  IE+
Sbjct: 113 VEDPDGYKIEL 123

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score = 48.6 bits (116), Expect = 8e-08
 Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 21/131 (16%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF-DGACRLFNYGMG-------IHLLK 65
           + H  +    ++ S+ FY   LG   +R+   +D  +    L   G G       + L  
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRK---WDVPEDKYTLVFLGYGPEMSSTVLELTY 65

Query: 66  SEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFH 125
           +    +        +    HI+   E++  +   +++  +       E G +     F  
Sbjct: 66  NYGVTSY-----KHDEAYGHIAIGVEDVKELVADMRKHDVPIDY-EDESGFM----AFVV 115

Query: 126 DPDGSMIEICN 136
           DPDG  IE+ N
Sbjct: 116 DPDGYYIELLN 126

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 46.8 bits (111), Expect = 2e-07
 Identities = 16/123 (13%), Positives = 35/123 (28%), Gaps = 20/123 (16%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKN 78
           L  R V  +++F+ + LGF        F  D    +    + + +  S   D +      
Sbjct: 11  LTARDVAEAVEFWTDRLGF-----SRVFVEDDFAGVVRDDVTLFI--SAVQDQVV----- 58

Query: 79  INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD------QLFFHDPDGSMI 132
             P +         +  +     E+     +         +       +    DP G+ +
Sbjct: 59  --PDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCV 116

Query: 133 EIC 135
              
Sbjct: 117 HFV 119

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 46.4 bits (110), Expect = 1e-06
 Identities = 23/129 (17%), Positives = 43/129 (33%), Gaps = 17/129 (13%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIH-LLKSEEP 69
           +    H  +   ++E  + FY+NVLG     R       G      +    H      E 
Sbjct: 6   VLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD----QGRVYFKCWDERDHSCYIIREA 61

Query: 70  DNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGINVDQLFFHD 126
           D             +   F+  + A +E+    L+   +   +    E     +++ F  
Sbjct: 62  D---------TAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFEL 112

Query: 127 PDGSMIEIC 135
           P G +IE+ 
Sbjct: 113 PSGHLIELY 121

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 44.5 bits (105), Expect = 7e-06
 Identities = 24/142 (16%), Positives = 42/142 (29%), Gaps = 27/142 (19%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFP---IRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           L+H  L   ++      +  VLGF+    +  P      G     ++ +  H        
Sbjct: 152 LDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKV--H-------- 201

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-G--INVDQLF- 123
           ++         K +H SF  E+   V R    +   ++      V+ G            
Sbjct: 202 DIAFVEYPEKGKLHHCSFLLESWEQVLRAGDIMSMNEV-----NVDIGPTRHGVTRGCTI 256

Query: 124 -FHDPDGSMIEICNCDVLPVVP 144
              DP G+  E          P
Sbjct: 257 YAWDPSGNRFETF-MGGYHPYP 277

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 44.5 bits (105), Expect = 2e-06
 Identities = 23/123 (18%), Positives = 40/123 (32%), Gaps = 20/123 (16%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKN 78
           L  R  +++  FY+  LGF  +     F   G   L    + +       P   P A   
Sbjct: 9   LPSRDFDSTAAFYER-LGFGIV-----FRDAGWMILQRGDLMLEF--FAHPGLDPLA--- 57

Query: 79  INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ------LFFHDPDGSMI 132
                     + +++A   R+ K + I    S          Q          DPDG+++
Sbjct: 58  ---SWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLL 114

Query: 133 EIC 135
            + 
Sbjct: 115 RLI 117

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 46.1 bits (109), Expect = 2e-06
 Identities = 27/138 (19%), Positives = 42/138 (30%), Gaps = 18/138 (13%)

Query: 8   PLCLKSLNHISLVCRSVEASLDFYQNVLGFFP---IRRPGSFDFDGACRLFNYGMGIHLL 64
               + + H+ L  R    +L FY++VLGF     +R P      G              
Sbjct: 137 VTGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQ--MVGRPADGPPAWLRFFG 194

Query: 65  KSEEPDNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-G--IN 118
            +    +L       +    H+  + E    V     R    K+      +    G  +N
Sbjct: 195 CNPRHHSLAFLPMPTSSGIVHLMVEVEQADDVGLCLDRALRRKV-----PMSATLGRHVN 249

Query: 119 VDQLFF--HDPDGSMIEI 134
              L F    P G  IE 
Sbjct: 250 DLMLSFYMKTPGGFDIEF 267

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 40.7 bits (95), Expect = 1e-04
 Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 19/131 (14%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           ++SL ++ +    + A  ++   VLG    +       +GA  L        L+      
Sbjct: 3   IRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP----EGALYLRMDDFPARLVVVPGEH 58

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVK-SRVEEGGINVDQLF-FH 125
                      +     ++C N   ++    RL      Y + +  E     VD++  F 
Sbjct: 59  ----------DRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFA 108

Query: 126 DPDGSMIEICN 136
           DP G+ +E+ +
Sbjct: 109 DPSGNCLEVFH 119

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 45.6 bits (108), Expect = 3e-06
 Identities = 20/140 (14%), Positives = 34/140 (24%), Gaps = 22/140 (15%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFP---IRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           L H        + +L FY +VLGF     I      D        +     H L      
Sbjct: 143 LGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAFP 202

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGI----NVDQLF--F 124
                      + +H   +  ++  V      +        +    +    N   +    
Sbjct: 203 L--------PKRIHHFMLEVASLDDVGFAFDRVD----ADGLITSTLGRHTNDHMVSFYA 250

Query: 125 HDPDGSMIEICNCDVLPVVP 144
             P G  +E        V  
Sbjct: 251 STPSGVEVEYG-WSARTVDR 269

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 42.6 bits (100), Expect = 3e-05
 Identities = 27/170 (15%), Positives = 49/170 (28%), Gaps = 26/170 (15%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGA-CRLFNYGMGIHLLKSEEP 69
           ++SL ++      V A   F    LG            +G   R+ +    I + + E  
Sbjct: 2   IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD----NGDLFRIDSRAWRIAVQQGEVD 57

Query: 70  DNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGI-NVDQLF-F 124
           D                 ++  + A + +   +LK+  I              V  L  F
Sbjct: 58  D------------LAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITF 105

Query: 125 HDPDGSMIEICN----CDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQ 170
            DP G  +EI          P +P A  +  +       +         +
Sbjct: 106 ADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDK 155

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 45.4 bits (107), Expect = 3e-06
 Identities = 22/129 (17%), Positives = 39/129 (30%), Gaps = 20/129 (15%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEP 69
           +  L    L     + +LDF+   LG +   R        +  L  Y       LK  E 
Sbjct: 9   IAHLARAELFSPKPQETLDFFTKFLGMYVTHRE-----GQSVYLRGYEDPYPWSLKITEA 63

Query: 70  DNLPKAGKNINPKDNHISFQC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHD 126
                          H + +    E +    + L +  +D   S  + G        +  
Sbjct: 64  P---------EAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGY--GKTFEYQS 112

Query: 127 PDGSMIEIC 135
           PDG  +++ 
Sbjct: 113 PDGHNLQLL 121

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 21/146 (14%)

Query: 8   PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSE 67
            + +K ++H++L+   V A  D ++  LGF    R    + +    +    +  H +   
Sbjct: 148 GIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVVDGNVEIGAWMS-SNLLGHEV--- 203

Query: 68  EPDNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-G--INVDQ 121
                 +     + K +H++F               ++  I     ++E G         
Sbjct: 204 ---ACMRDMTGGHGKLHHLAFFYGTGQHNIDAVEMFRDYDI-----QIEAGPDKHGITQS 255

Query: 122 LF--FHDPDGSMIEI-CNCDVLPVVP 144
            F    +P G+ IE+      L + P
Sbjct: 256 QFLYVFEPGGNRIELFGEAGYLHLDP 281

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 42.9 bits (101), Expect = 6e-06
 Identities = 14/122 (11%), Positives = 31/122 (25%), Gaps = 20/122 (16%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKN 78
           L    V A++ F+ + LGF        F       +    + +H+ ++E           
Sbjct: 11  LTAVDVPANVSFWVDTLGFEKDFGDRDF-----AGVRRGDIRLHISRTEHQI-------- 57

Query: 79  INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD------QLFFHDPDGSMI 132
               +     +  +   +                      V       +    DP G+ +
Sbjct: 58  -VADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCV 116

Query: 133 EI 134
             
Sbjct: 117 HF 118

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 42.9 bits (101), Expect = 7e-06
 Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 6/123 (4%)

Query: 15  NHIS--LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNL 72
           +H+   L     + ++D+   V GF  + R  +        L + G GI +++       
Sbjct: 2   SHMVVELAYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRHADL-DTGGGIVMVRRTGEPYT 60

Query: 73  PKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMI 132
                    K   +     ++     R      D +   +++    + Q    D +G + 
Sbjct: 61  VSCAGGHTCK--QVIVWVSDVDEHFMRSTAAGAD-IVQPLQDKPWGLRQYLVRDLEGHLW 117

Query: 133 EIC 135
           E  
Sbjct: 118 EFT 120

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 43.7 bits (103), Expect = 1e-05
 Identities = 18/129 (13%), Positives = 44/129 (34%), Gaps = 19/129 (14%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRR-PGSFDFDGACRLFNYGMGIHLLKSEEP 69
           +  + ++    +  +A   FY +V G  P+     +  F       ++   + L +++E 
Sbjct: 6   VTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDANNAWFKAQGADEHH--VVQLRRADEN 63

Query: 70  DNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGI----NVDQLFFH 125
                         + I+   ++ + V+     ++    K   E   +          F 
Sbjct: 64  R------------IDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFF 111

Query: 126 DPDGSMIEI 134
            PDG + E+
Sbjct: 112 SPDGLLFEV 120

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 41.4 bits (97), Expect = 8e-05
 Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 32/132 (24%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIH--LLKSEEPDN 71
           ++HI L   + +  + F+ +VLGF    +   +  D  C  F      H  +     P  
Sbjct: 142 ISHIVLHSPNHQDMVKFFTDVLGF----KVSDWLGDFMC--FLRCNSAHHRIAILPGPPC 195

Query: 72  LPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-G--INVDQLF-- 123
           L           NH+++   ++  + R   RLK   I      +  G G     +  F  
Sbjct: 196 L-----------NHVAYDMLSVDDMMRGAHRLKVKGI-----DIGWGPGRHTAGNNTFSY 239

Query: 124 FHDPDGSMIEIC 135
           F  P G + E  
Sbjct: 240 FVTPGGFVTEYT 251

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 43.8 bits (103), Expect = 1e-05
 Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 20/139 (14%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLP 73
           L HI +    VE +  FY+ +LG            +G       G  + +  ++   +L 
Sbjct: 147 LGHIIIREDDVEEATRFYR-LLGLEGAVEYKFALPNG-----AVGTPVFMHCNDRHHSLA 200

Query: 74  KAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-G--INVDQLFF--H 125
                ++ + NH+  +  ++  +      +++ KI      V    G   N + L F   
Sbjct: 201 FGVGPMDKRINHLMIEYTHLDDLGYAHDLVRQQKI-----DVTLQIGKHSNDEALTFYCA 255

Query: 126 DPDGSMIEICNCDVLPVVP 144
           +P G + E       P   
Sbjct: 256 NPSGWLWEPG-WGSRPAPA 273

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 40.7 bits (95), Expect = 1e-04
 Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 19/131 (14%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           +  L ++ L   +++A  D+   ++G   +                       L+ +   
Sbjct: 4   VTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGED--------------DRIYLRMDRWH 49

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDY-VKSRVEEGGINVDQLF-FH 125
           +      + +    +I ++      ++    +LK   I + V S  +     V  L   H
Sbjct: 50  HRIVLHADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLH 109

Query: 126 DPDGSMIEICN 136
           DP G+  EI  
Sbjct: 110 DPGGNPTEIFY 120

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 42.7 bits (100), Expect = 3e-05
 Identities = 19/141 (13%), Positives = 33/141 (23%), Gaps = 23/141 (16%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFP---IRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           + H          ++ FY  VLGF     I      +        +     H        
Sbjct: 143 IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHH-------- 194

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE-EGGI---NVDQ---LF 123
            +  A   I  + +H   Q   +  V         D + +       +     DQ    +
Sbjct: 195 TIALAAFPIPKRIHHFMLQANTIDDVGYAF-----DRLDAAGRITSLLGRHTNDQTLSFY 249

Query: 124 FHDPDGSMIEICNCDVLPVVP 144
              P   +          V  
Sbjct: 250 ADTPSPMIEVEFGWGPRTVDS 270

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 41.9 bits (98), Expect = 5e-05
 Identities = 24/169 (14%), Positives = 48/169 (28%), Gaps = 24/169 (14%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           ++ L ++    + V A   F    +G       G        R       I +   E  D
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAGDAAL---YRADQRAWRIAVQPGELDD 58

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVK-SRVEEGGINVDQLF-FH 125
                         +   + ++ A +ER   +L++  + + +          V  L    
Sbjct: 59  L------------AYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQ 106

Query: 126 DPDGSMIEICN----CDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQ 170
           DP G  +EI          P +P A  +  +       +         +
Sbjct: 107 DPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAK 155

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 20/130 (15%), Positives = 38/130 (29%), Gaps = 18/130 (13%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEP 69
           +    +  LV   +  S +FY +VLG            +    L ++     H L   + 
Sbjct: 15  ILRCAYAELVVTDLAKSRNFYVDVLGLHVSYED-----ENQIYLRSFEEFIHHNLVLTKG 69

Query: 70  DNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGINVDQLFFHD 126
                           ++F+      V++     +E+     + +        D L   D
Sbjct: 70  P---------VAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVED 120

Query: 127 PDGSMIEICN 136
           P G   E   
Sbjct: 121 PLGFPYEFFF 130

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 41.5 bits (97), Expect = 7e-05
 Identities = 20/133 (15%), Positives = 40/133 (30%), Gaps = 24/133 (18%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIH----LLKS 66
           +    ++ +V   +  S +FY +VLG            +    L +    IH    L + 
Sbjct: 15  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEED-----ENTIYLRSLEEFIHHNLVLRQG 69

Query: 67  EEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGI---NVDQLF 123
                               +++ ++ A V+      K    ++   + G      D + 
Sbjct: 70  PIAA------------VAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVR 117

Query: 124 FHDPDGSMIEICN 136
             DP G   E   
Sbjct: 118 VEDPLGFPYEFFY 130

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 39.2 bits (91), Expect = 4e-04
 Identities = 25/129 (19%), Positives = 41/129 (31%), Gaps = 21/129 (16%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFP---IRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           L+H + V   V     + +  LGF     I+      +              L       
Sbjct: 153 LDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNG-- 209

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE--EGGINVDQ---LFFH 125
                     P+ +H++F       + +   +M    +  R+E   G   V     L+  
Sbjct: 210 ----------PRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYIL 259

Query: 126 DPDGSMIEI 134
           DPDG  IEI
Sbjct: 260 DPDGHRIEI 268

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 40.1 bits (93), Expect = 9e-05
 Identities = 17/138 (12%), Positives = 43/138 (31%), Gaps = 8/138 (5%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGF---FPIRRPGSFDFDGACRLFNY 57
           M    E    ++    +    + ++ ++ +++ +LG+      R    F   G    +  
Sbjct: 10  MSRFSERGYVVRENGPV-YFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPS 68

Query: 58  GMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGI 117
            + +  L      +L K       K        E +  + + +KE   D +   +     
Sbjct: 69  EVAVAHLTPFRGFHLFKGE---PIKGVAGFMMIEGIDALHKYVKENGWDQISD-IYTQPW 124

Query: 118 NVDQLFFHDPDGSMIEIC 135
              +      DG ++   
Sbjct: 125 GARECSITTTDGCILRFF 142

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 19/131 (14%), Positives = 39/131 (29%), Gaps = 23/131 (17%)

Query: 12  KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIH----LLKSE 67
               H+ L    +  +L+ Y  +LG   + R       G   L  +         L +++
Sbjct: 6   MRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD----QGRVYLKAWTEVDKFSLVLREAD 61

Query: 68  EPDNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGINVDQLFF 124
           E            P  + + F+  +   + +    L        +    E      ++ F
Sbjct: 62  E------------PGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRF 109

Query: 125 HDPDGSMIEIC 135
             P G   E+ 
Sbjct: 110 QAPSGHHFELY 120

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 28/142 (19%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFP---IRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
            +H  +    + A+ D +  VLGF+    +          A  L           S +  
Sbjct: 151 FDHALMYGDELPATYDLFTKVLGFYLAEQVLDEN--GTRVAQFLS---------LSTKAH 199

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-G--INVDQLF- 123
           ++         + +H+SF  E    + R    +           ++ G            
Sbjct: 200 DVAFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDT-----SIDIGPTRHGLTHGKTI 254

Query: 124 -FHDPDGSMIEICNCDVLPVVP 144
            F DP G+  E+  C      P
Sbjct: 255 YFFDPSGNRNEVF-CGGDYNYP 275

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 38.8 bits (90), Expect = 5e-04
 Identities = 17/131 (12%), Positives = 36/131 (27%), Gaps = 19/131 (14%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           +  L ++ +  +  +A   F  ++LG   +                       L+ +   
Sbjct: 7   VIELGYMGISVKDPDAWKSFATDMLGLQVLDEGEK--------------DRFYLRMDYWH 52

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGI-NVDQLF-FH 125
           +      N      ++ ++       E    +L +           E     V  L    
Sbjct: 53  HRIVVHHNGQDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTE 112

Query: 126 DPDGSMIEICN 136
           DP G+  EI  
Sbjct: 113 DPGGNPTEIFW 123

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 38.4 bits (89), Expect = 8e-04
 Identities = 21/139 (15%), Positives = 41/139 (29%), Gaps = 20/139 (14%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLP 73
           L H  +    V  +  FY ++LGF           +G            +  +    ++ 
Sbjct: 150 LGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNG-----MTAELSFMHCNARDHSIA 203

Query: 74  KAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-G--INVDQLFF--H 125
                   + NH+  +  +M  +     +  + +I      +    G   N   L F   
Sbjct: 204 FGAMPAAKRLNHLMLEYTHMEDLGYTHQQFVKNEI-----DIALQLGIHANDKALTFYGA 258

Query: 126 DPDGSMIEICNCDVLPVVP 144
            P G +IE         + 
Sbjct: 259 TPSGWLIEPG-WRGATAID 276

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	195
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.88
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.88
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.88
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.86
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.86
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.86
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.85
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.85
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.85
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.84
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.84
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.84
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.84
3ghj_A	141	Putative integron gene cassette protein; integron	99.83
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.83
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.83
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.83
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.83
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.83
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.82
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.82
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.82
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.82
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.82
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.82
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.81
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.81
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.81
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.81
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.81
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.81
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.8
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.8
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.79
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.79
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.79
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.79
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.79
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.79
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.79
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.79
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.79
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.78
2i7r_A	118	Conserved domain protein; structural genomics cons	99.78
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.78
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.78
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.78
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.77
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.77
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.77
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.77
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.77
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.76
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.76
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.76
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.76
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.76
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.76
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.75
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.75
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.74
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.74
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.73
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.73
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.73
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.71
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.71
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.68
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.68
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.68
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.66
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.64
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.64
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.64
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.63
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.61
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.61
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.61
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.6
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.6
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.59
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.57
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.55
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.54
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.48
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.48
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.47
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.44
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.42
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.42
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.38
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.33
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.33
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.23
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.18
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.13
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.13
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.04
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	98.96
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.9
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.89
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	98.04
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	97.64
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	97.63
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	97.04
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	96.73
2p25_A	126	Glyoxalase family protein; structural genomics, MC	94.94
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	93.87
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	93.46
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	93.13
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	92.72
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	91.87
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	90.33
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	89.62
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	89.58
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	89.42
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	87.69
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	87.24
3ghj_A	141	Putative integron gene cassette protein; integron	85.2
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	84.93
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	84.88
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	84.61
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	83.04
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	82.75
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	82.68
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	82.39
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	82.3
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	81.6
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	81.25
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	80.18

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.88  E-value=1.7e-21  Score=142.38  Aligned_cols=132  Identities=23%  Similarity=0.260  Sum_probs=95.8

Q ss_pred             CCCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCC--------CCCccEEEeecCcEEEEeeeCCCCCCCCCCC
Q 029305            6 ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--------DFDGACRLFNYGMGIHLLKSEEPDNLPKAGK   77 (195)
Q Consensus         6 ~~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~--------~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~   77 (195)
                      ..++++++|+||.|.|+|++++++||+++|||++..+....        .....+..+..+..++++.............
T Consensus        12 ~~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~   91 (156)
T 3kol_A           12 LAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDPNPE   91 (156)
T ss_dssp             CCTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCCSSSSTT
T ss_pred             cCccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCcCCCCCC
Confidence            34578899999999999999999999999999998732210        0011231223346677877654322111111


Q ss_pred             CCCCCceEEEEEeC--CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           78 NINPKDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        78 ~~~~g~~Hiaf~v~--dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ....+..|++|.|+  |+++++++|+++|+++...+... +++ +.+||.|||||.|||++...
T Consensus        92 ~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~-~~g-~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           92 KTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTR-PTG-RGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC--CC-EEEEEECTTSCEEEEEECCC
T ss_pred             CCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceec-CCc-cEEEEECCCCCEEEEEecCC
Confidence            35578999999999  99999999999999998766443 223 69999999999999998643

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.88  E-value=1.2e-21  Score=139.54  Aligned_cols=128  Identities=20%  Similarity=0.365  Sum_probs=96.0

Q ss_pred             CCCCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCce
Q 029305            5 VENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDN   84 (195)
Q Consensus         5 ~~~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~   84 (195)
                      |..+|++++|+|+.|.|+|++++.+||+++|||++..+.+    ...+ +...+..+.+....... .+... ....+..
T Consensus         2 ~~~~m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~~~-~~~~~~~~~l~~~~~~~-~~~~~-~~~~~~~   74 (133)
T 3ey7_A            2 MEFLMKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA----GRIA-LEFGHQKINLHQLGNEF-EPKAQ-NVRVGSA   74 (133)
T ss_dssp             CSCCCCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT----TEEE-EEETTEEEEEEETTSCC-SSCCT-TCCTTCC
T ss_pred             CceEeEecccCEEEEEECCHHHHHHHHHHccCceEEEecC----CeEE-EEcCCEEEEEEcCCCCc-cccCC-CCCCCcc
Confidence            3456788999999999999999999999999999988753    1222 22334566666554332 12211 4566789


Q ss_pred             EEEEEeCC-HHHHHHHHHhCCCeEeccceecCC--cceEEEEEECCCCCEEEEEecCC
Q 029305           85 HISFQCEN-MAIVERRLKEMKIDYVKSRVEEGG--INVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        85 Hiaf~v~d-l~~~~~~l~~~gv~~~~~~~~~~~--~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      |++|.|+| +++++++|+++|+++...+....+  .+.+.+||.|||||.|||++..+
T Consensus        75 ~~~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           75 DLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEEEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            99999996 999999999999998876633322  23479999999999999999643

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.88  E-value=1.2e-21  Score=139.24  Aligned_cols=126  Identities=21%  Similarity=0.303  Sum_probs=91.1

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec-CcEEEEee-------eCCCCCCCCCCCCCC
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY-GMGIHLLK-------SEEPDNLPKAGKNIN   80 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~~ll~-------~~~~~~~~~~~~~~~   80 (195)
                      |++++|+||.|.|+|++++.+||+++|||++..+....+....+..+.. +..++++.       .......+. .....
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~-~~~~~   79 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERIS-WPREA   79 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCC-SSSCC
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccC-CCCCC
Confidence            4688999999999999999999999999999875432111122223443 35677776       222211111 11255


Q ss_pred             CCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           81 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      .+..|++|.|+|+++++++|+++|+++...+.. ..++.+.+||.|||||.|||++
T Consensus        80 ~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           80 CGLRHLAFYVEDVEASRQELIALGIRVEEVRYD-DYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHTCCCCCCEEC-TTSCCEEEEEECTTCCEEEEEC
T ss_pred             CCeEEEEEEECCHHHHHHHHHhCCCcccceecc-CCCceEEEEEECCCCCEEEEeC
Confidence            678999999999999999999999998765533 2234589999999999999985

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.86  E-value=3.1e-21  Score=137.95  Aligned_cols=126  Identities=14%  Similarity=0.212  Sum_probs=90.5

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCc-cEEEe-ecCcEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDG-ACRLF-NYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~-~~~~~-~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      |+++|+||.|.|+|++++++||+ +|||++..+....+..+ ...++ ..+..+++++...+............|++|+|
T Consensus         4 M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hia   82 (133)
T 3hdp_A            4 MSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHIC   82 (133)
T ss_dssp             CCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEEE
T ss_pred             cceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEEE
Confidence            56889999999999999999999 99999876531111111 11122 34567888876543221110001156788999


Q ss_pred             EEeCCHHHHHHHHHhCCCeEecccee-cCCcceEEEEEECCCCCEEEEEe
Q 029305           88 FQCENMAIVERRLKEMKIDYVKSRVE-EGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        88 f~v~dl~~~~~~l~~~gv~~~~~~~~-~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      |.|+|+++++++|+++|+++...+.+ .+.++.+.+|++|||||.|||++
T Consensus        83 f~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e  132 (133)
T 3hdp_A           83 YEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLE  132 (133)
T ss_dssp             EEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEE
T ss_pred             EEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEec
Confidence            99999999999999999998876432 22235589999999999999987

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.86  E-value=1.2e-20  Score=138.26  Aligned_cols=126  Identities=24%  Similarity=0.410  Sum_probs=92.0

Q ss_pred             CCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus         7 ~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      .+|++.+|+||.|.|+|++++++||+++|||++..+.+    ...+ +...+..+.+....... .+... ....+..|+
T Consensus        17 ~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~----~~~~-l~~~~~~l~l~~~~~~~-~~~~~-~~~~g~~hi   89 (152)
T 3huh_A           17 IQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ----NRKA-LIFGAQKINLHQQEMEF-EPKAS-RPTPGSADL   89 (152)
T ss_dssp             ---CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT----TEEE-EEETTEEEEEEETTBCC-SSCCS-SCCTTCCEE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC----CeEE-EEeCCeEEEEeccCCcC-CCcCc-CCCCCccEE
Confidence            45778999999999999999999999999999998743    2233 33334556666554321 11111 445678999


Q ss_pred             EEEeC-CHHHHHHHHHhCCCeEeccceec-CCc-ceEEEEEECCCCCEEEEEecCC
Q 029305           87 SFQCE-NMAIVERRLKEMKIDYVKSRVEE-GGI-NVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        87 af~v~-dl~~~~~~l~~~gv~~~~~~~~~-~~~-~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +|.+. |+++++++|+++|+++...+... ++. +.+.+||.|||||.|||++..+
T Consensus        90 ~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  145 (152)
T 3huh_A           90 CFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVE  145 (152)
T ss_dssp             EEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC--
T ss_pred             EEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEeccc
Confidence            99998 99999999999999987766332 221 2489999999999999999755

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.86  E-value=1.4e-20  Score=133.09  Aligned_cols=121  Identities=17%  Similarity=0.204  Sum_probs=90.7

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCC--CCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS--FDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      ++|+||.|.|+|++++.+||+++|||++..+...  .++...|..+..+..++++........+.   ....|..|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~---~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKTT---GENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCCC---SSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCCC---cCCCceEEEEEE
Confidence            4689999999999999999999999999875221  11122332233456788887664332221   345678999999


Q ss_pred             eCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           90 CEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        90 v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      |+|   +++++++|+++|+++...+.. .+++.+.+||.|||||.|||+.
T Consensus        79 v~d~~~v~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iel~~  127 (127)
T 3e5d_A           79 TGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDPEGNRIEITW  127 (127)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEE-CTTSCEEEEEECTTSCEEEEEC
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCccc-CCCCcEEEEEECCCCCEEEEeC
Confidence            998   889999999999999876643 3345578999999999999974

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.85  E-value=2e-20  Score=131.80  Aligned_cols=124  Identities=22%  Similarity=0.323  Sum_probs=89.4

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccE-EEeec-CcEEEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAC-RLFNY-GMGIHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~-~~~~~-g~~~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      |++++|+|+.|.|+|++++.+||+++|||++..+....+ ...+ ..+.. +..++++....+...+. . ....+..|+
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~-~~~~g~~~~   77 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPE-KNDIKLDLKLGSQELEIFISDQFPARPS-Y-PEALGLRHL   77 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGG-GTEEEEEEEETTEEEEEEECTTCCCCCC-S-SCCSSCCCE
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCC-CcceEEEEecCCeEEEEEeccCCCCCCC-C-CCCccceEE
Confidence            467899999999999999999999999999876421110 1222 12332 33677766543222221 1 334678899


Q ss_pred             EEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           87 SFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        87 af~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      +|.|+|+++++++|+++|+++...+.. ..++.+.+||.|||||.|||++
T Consensus        78 ~~~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           78 AFKVEHIEEVIAFLNEQGIETEPLRVD-DFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EEECSCHHHHHHHHHHTTCCCCCCEEC-TTTCCEEEEEECTTCCEEEEEC
T ss_pred             EEEeCCHHHHHHHHHHcCCcccccccc-CCCCcEEEEEECCCCCEEEeeC
Confidence            999999999999999999998765532 2334589999999999999975

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.85  E-value=7.1e-21  Score=157.47  Aligned_cols=161  Identities=20%  Similarity=0.242  Sum_probs=117.1

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccE-EEeec-----CcEEEEeeeCCCCCCCCCCCCCCCC
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAC-RLFNY-----GMGIHLLKSEEPDNLPKAGKNINPK   82 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~-~~~~~-----g~~~~ll~~~~~~~~~~~~~~~~~g   82 (195)
                      |++++|+||+|.|+|++++.+||+++|||++..+..+.+..+.+ ..+..     |..+.++......  +.  ....++
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~--~~--~~~~~~   79 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGAR--QG--VIGDGQ   79 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCC--BC--BCCBSE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCC--CC--CCCCCc
Confidence            46899999999999999999999999999998764333222333 12322     3457776554321  11  133456


Q ss_pred             ceEEEEEeC--CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccc
Q 029305           83 DNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVN  160 (195)
Q Consensus        83 ~~Hiaf~v~--dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~  160 (195)
                      +.|+||.|+  +++++.++|++.|+++..  ....  +.+.+||.|||||.|||++..+...+|+.. +.++.       
T Consensus        80 ~~hiaf~V~~~dl~~~~~rL~~~Gv~~~~--~~~~--g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~-~~v~~-------  147 (335)
T 3oaj_A           80 VGVTSYVVPKGAMAFWEKRLEKFNVPYTK--IERF--GEQYVEFDDPHGLHLEIVEREEGEANTWTF-GEVTP-------  147 (335)
T ss_dssp             EEEEEEEECTTCHHHHHHHHHHTTCCCEE--EEET--TEEEEEEECTTSCEEEEEECSCSCCCCCCB-TTBCT-------
T ss_pred             eEEEEEEecHHHHHHHHHHHHhCcceeee--eccC--CcEEEEEECCCCCEEEEEEeCCCCcCCCcC-CCCCh-------
Confidence            899999999  999999999999999875  2222  458999999999999999986644444432 11110       


Q ss_pred             hhhhhhhhhhcCCCCCCCcccccccccccccc
Q 029305          161 CNFHQQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                             .....+|.|+++.++|++++.+||.
T Consensus       148 -------~~~i~gl~Hv~L~v~Dle~t~~FY~  172 (335)
T 3oaj_A          148 -------DVAIKGFGGATLLSEQPDKTADLLE  172 (335)
T ss_dssp             -------TTSCCEEEEEEEECSSHHHHHHHHH
T ss_pred             -------hhhhccccceEEEECCHHHHHHHHH
Confidence                   1235679999999999999999994

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.85  E-value=4.5e-21  Score=140.51  Aligned_cols=138  Identities=19%  Similarity=0.216  Sum_probs=99.5

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      ||+++|+|+.|.|+|++++.+||+++|||++..+.+    ...+ +...+..+.+..................+..|++|
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~-~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~f   75 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRNP----EIIF-YQMNGFVLATWLVQNLQEDVGVAVTSRPGSMALAH   75 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEECS----SEEE-EECSSSEEEEEEHHHHHHHHSSCCCSSCCSCEEEE
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCCC----CEEE-EEcCCEEEEEEeccccccccCCCCCCCCCeEEEEE
Confidence            456889999999999999999999999999887642    1222 22234667776543210000000012456789999


Q ss_pred             Ee---CCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhccc
Q 029305           89 QC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSC  155 (195)
Q Consensus        89 ~v---~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~  155 (195)
                      .|   +|+++++++|+++|+++..++... .++.+.+||.|||||.|||++.   +.|+..++|++.+..
T Consensus        76 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~---~~~~~~~~g~~~~~~  141 (150)
T 3bqx_A           76 NVRAETEVAPLMERLVAAGGQLLRPADAP-PHGGLRGYVADPDGHIWEIAFN---PVWPIGADGSVTFAA  141 (150)
T ss_dssp             ECSSGGGHHHHHHHHHHTTCEEEEEEECC-TTSSEEEEEECTTCCEEEEEEC---TTSCEETTEEECCCC
T ss_pred             EeCCHHHHHHHHHHHHHCCCEEecCCccc-CCCCEEEEEECCCCCEEEEEeC---CCceECCCCcEeeec
Confidence            99   799999999999999988766432 2345899999999999999986   557778888887754

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.84  E-value=4.5e-20  Score=134.80  Aligned_cols=123  Identities=22%  Similarity=0.350  Sum_probs=90.2

Q ss_pred             CcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      +|++.+|+||.|.|+|++++++||+++|||++....+.    ..+ +...+..+.+...... ..+... ...+|..|++
T Consensus        22 ~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~----~~~-l~~g~~~l~l~~~~~~-~~~~~~-~~~~g~~~~~   94 (147)
T 3zw5_A           22 SMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKED----RKA-LCFGDQKFNLHEVGKE-FEPKAA-HPVPGSLDIC   94 (147)
T ss_dssp             HTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETTT----EEE-EEETTEEEEEEETTSC-CSSCCS-SCCTTCCEEE
T ss_pred             ceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCCC----ceE-EEECCcEEEEEEcCCC-cCcccC-CCCCCCceEE
Confidence            56789999999999999999999999999999876541    222 2223345556554322 112111 3455778999


Q ss_pred             EEeC-CHHHHHHHHHhCCCeEeccceecCC--cceEEEEEECCCCCEEEEEec
Q 029305           88 FQCE-NMAIVERRLKEMKIDYVKSRVEEGG--INVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        88 f~v~-dl~~~~~~l~~~gv~~~~~~~~~~~--~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      |.+. |+++++++|+++|+++...+....+  .+.+.+||.|||||.|||+++
T Consensus        95 ~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A           95 LITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             EECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             EEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            9887 9999999999999998765533221  134689999999999999874

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.84  E-value=1.2e-20  Score=134.07  Aligned_cols=127  Identities=23%  Similarity=0.296  Sum_probs=89.6

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEee-cCcEEEEeeeCCCCCCCCC--CCCCCCCceEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFN-YGMGIHLLKSEEPDNLPKA--GKNINPKDNHI   86 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~g~~~~ll~~~~~~~~~~~--~~~~~~g~~Hi   86 (195)
                      |+++|+|+.|.|+|++++.+||+++|||++..+....+....+..+. .+..++++...........  ......+..|+
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi   81 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHI   81 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEE
Confidence            47899999999999999999999999999886532111111222333 3467888766543221100  00235678999


Q ss_pred             EEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEE--ECCCCCEEEEEe
Q 029305           87 SFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFF--HDPDGSMIEICN  136 (195)
Q Consensus        87 af~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~--~DPdGn~iEi~~  136 (195)
                      +|.|+|+++++++|+++|+++...+......+.+.+|+  +|||||.|||++
T Consensus        82 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           82 CIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             EEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             EEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence            99999999999999999999876643333334456666  899999999987

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.84  E-value=1.3e-19  Score=129.75  Aligned_cols=114  Identities=18%  Similarity=0.201  Sum_probs=88.7

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEe--ecCcEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLF--NYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~--~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      ++.+++||.|.|+|++++++||+++|||++..+.+.      +..+  ..+..+.++....+  .+    ...++..|++
T Consensus        10 ~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~~------~~~~~~~~~~~l~l~~~~~~--~~----~~~~~~~~~~   77 (132)
T 3sk2_A           10 PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTPR------YVAFPSSGDALFAIWSGGEE--PV----AEIPRFSEIG   77 (132)
T ss_dssp             CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECSS------EEEEECSTTCEEEEESSSCC--CC----TTSCCCEEEE
T ss_pred             CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCCC------EEEEEcCCCcEEEEEeCCCC--Cc----CCCCCcceEE
Confidence            457899999999999999999999999999876541      2233  33466777655411  11    3345788999


Q ss_pred             EEeCC---HHHHHHHHHh---CCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           88 FQCEN---MAIVERRLKE---MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        88 f~v~d---l~~~~~~l~~---~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      |.|++   +++++++|++   +|+++..++... .++ +.+||.|||||.|||++.
T Consensus        78 ~~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~-~~g-~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           78 IMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTD-VFG-RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             EEESSHHHHHHHHHHHHHCSSSCCEEEEEEEEE-TTE-EEEEEECTTCCEEEEEEC
T ss_pred             EEeCCHHHHHHHHHHHHhhhcCCCEEeeCCccc-Cce-EEEEEECCCCCEEEEEeC
Confidence            99986   9999999999   999998776443 334 899999999999999974

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.84  E-value=4.7e-21  Score=141.37  Aligned_cols=123  Identities=15%  Similarity=0.173  Sum_probs=85.1

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec--C-cEEEEeeeCCCCCCC--CCCCCCCCCceE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY--G-MGIHLLKSEEPDNLP--KAGKNINPKDNH   85 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--g-~~~~ll~~~~~~~~~--~~~~~~~~g~~H   85 (195)
                      .++|+|+.|.|+|+++|++||+++|||++..+....  +..|..+..  + ....++.........  ........+..|
T Consensus        24 ~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~  101 (155)
T 4g6x_A           24 AMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVG--ADRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPA  101 (155)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEET--TEEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCS
T ss_pred             ceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCC--CceEEEEeccCCCcceEEEeccCCCccccccccccccCCceE
Confidence            458999999999999999999999999987653211  122312221  1 222222222111111  000122457789


Q ss_pred             EEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           86 ISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        86 iaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      ++|.|+|+++++++|+++|+++..++....+  ++.+||+|||||.|||++.
T Consensus       102 l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~  151 (155)
T 4g6x_A          102 ASFAVDDIAAEYERLSALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQI  151 (155)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC
T ss_pred             EEeeechhhhhhhHHhcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEE
Confidence            9999999999999999999999887754432  3789999999999999984

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.83  E-value=1.4e-19  Score=131.41  Aligned_cols=117  Identities=21%  Similarity=0.303  Sum_probs=84.7

Q ss_pred             CCCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec-CcEEEEeeeCCCCCCCCCCCCCCCCce
Q 029305            6 ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY-GMGIHLLKSEEPDNLPKAGKNINPKDN   84 (195)
Q Consensus         6 ~~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~~ll~~~~~~~~~~~~~~~~~g~~   84 (195)
                      +.+|++.+|+||.|.|+|++++.+||+++|||++..+.+..  ...+..+.. +..+.+.+..           ...+..
T Consensus        21 ~~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~~~l~l~~~~-----------~~~~~~   87 (141)
T 3ghj_A           21 GVPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSAR--RWNFLWVSGRAGMVVLQEEK-----------ENWQQQ   87 (141)
T ss_dssp             -----CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTT--TEEEEEETTTTEEEEEEECC-----------SSCCCC
T ss_pred             cCceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCC--cEEEEEecCCCcEEEEeccC-----------CCCCCc
Confidence            35678999999999999999999999999999998874311  123312222 2445555442           123568


Q ss_pred             EEEEEeC--CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           85 HISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        85 Hiaf~v~--dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      |++|.|+  |+++++++|+++|+++..+.... ..+.+.+||.|||||.|||++
T Consensus        88 h~~~~v~~~dld~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           88 HFSFRVEKSEIEPLKKALESKGVSVHGPVNQE-WMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             EEEEEECGGGHHHHHHHHHHTTCCCEEEEEEG-GGTEEEEEEECTTCCEEEEEE
T ss_pred             eEEEEEeHHHHHHHHHHHHHCCCeEeCCcccC-CCCceEEEEECCCCCEEEEEE
Confidence            9999998  99999999999999988443222 224589999999999999986

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.83  E-value=9.5e-20  Score=129.21  Aligned_cols=116  Identities=18%  Similarity=0.301  Sum_probs=88.8

Q ss_pred             cccCccceEEEEc--CCHHHHHHHHHhccCCeEeecCCCC-CCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceE
Q 029305            9 LCLKSLNHISLVC--RSVEASLDFYQNVLGFFPIRRPGSF-DFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNH   85 (195)
Q Consensus         9 ~~i~~i~hv~l~v--~dl~~s~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~H   85 (195)
                      |++.+|+||.|.|  +|++++.+||+++|||++..+.... .....| +...+..+++.....         ....+..|
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~-~~~~~~~l~l~~~~~---------~~~~~~~~   75 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCW-FKCGNQEIHIGVEQN---------FNPAKRAH   75 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGCCEE-EEETTEEEEEEECTT---------CCCCSSSC
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCCCceE-EEeCCEEEEEEecCC---------CCCCCceE
Confidence            5789999999999  8999999999999999998764311 012344 333345566654321         11246789


Q ss_pred             EEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           86 ISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        86 iaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      ++|.|+|+++++++|+++|+++...+. .  ++.+.+||.|||||.|||++.
T Consensus        76 ~~f~v~d~~~~~~~l~~~G~~~~~~~~-~--~g~~~~~~~DPdG~~iel~~~  124 (126)
T 2qqz_A           76 PAFYVLKIDEFKQELIKQGIEVIDDHA-R--PDVIRFYVSDPFGNRIEFMEN  124 (126)
T ss_dssp             EEEEETTHHHHHHHHHHTTCCCEEECS-S--TTEEEEEEECTTSCEEEEEEE
T ss_pred             EEEEcCCHHHHHHHHHHcCCCccCCCC-C--CCeeEEEEECCCCCEEEEEeC
Confidence            999999999999999999999887662 2  245899999999999999985

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.83  E-value=4.5e-20  Score=132.69  Aligned_cols=126  Identities=21%  Similarity=0.301  Sum_probs=90.8

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      |++++|+|+.|.|+|++++.+||+++|||++..+....+.......+..+..+.|.+...... +.. .....+..|++|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~-~~~~~g~~h~~f   78 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLPGGLSIVLREHDGGGT-DLF-DETRPGLDHLSF   78 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECTTSCEEEEEEETTCSS-SCC-CTTSSEEEEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEcCCCEEEEEeCCCCcc-cCC-CCCCCCcceEEE
Confidence            467899999999999999999999999999987543110000111234446677776654321 111 134567889999


Q ss_pred             Ee---CCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           89 QC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        89 ~v---~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      .|   +|+++++++|+++|+++.... . ..++ +.+||.|||||.|||++...
T Consensus        79 ~v~~~~d~~~~~~~l~~~G~~~~~~~-~-~~~g-~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           79 SVESMTDLDVLEERLAKAGAAFTPTQ-E-LPFG-WILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCE-E-ETTE-EEEEEECTTCCEEEEEEECT
T ss_pred             EeCCHHHHHHHHHHHHHCCCcccCcc-c-cCCc-eEEEEECCCCCEEEEEEcCC
Confidence            99   799999999999999987433 2 2334 89999999999999998654

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.83  E-value=8.2e-20  Score=129.92  Aligned_cols=122  Identities=18%  Similarity=0.190  Sum_probs=90.1

Q ss_pred             CcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec---CcEEEEeeeCCCCCCCCCCCCCCCCce
Q 029305            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY---GMGIHLLKSEEPDNLPKAGKNINPKDN   84 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~---g~~~~ll~~~~~~~~~~~~~~~~~g~~   84 (195)
                      ++++++|+||.|.|+|++++.+||+++|||++..+... +....|..+..   +..+.+.......  ..   ....+..
T Consensus         8 ~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~---~~~~~~~   81 (133)
T 4hc5_A            8 SLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQL-DPNMRFVTVVPPGAQTQVALGLPSWYE--DG---RKPGGYT   81 (133)
T ss_dssp             CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEE-ETTEEEEEEECTTCSCEEEEECGGGCS--SC---CCSCEEE
T ss_pred             cccccceeEEEEEECCHHHHHHHHHhCcCCcEeeeccc-CCCceEEEEECCCCceEEEEecCcccc--cc---cCCCCeE
Confidence            35689999999999999999999999999999876421 01223423332   2446665443210  11   2235678


Q ss_pred             EEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           85 HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        85 Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      |++|.|+|+++++++|+++|+++..++... .++.+.+||.|||||.|||++
T Consensus        82 ~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           82 GISLITRDIDEAYKTLTERGVTFTKPPEMM-PWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCEESSSCEEC-TTSCEEEEEECTTCEEEEEEE
T ss_pred             EEEEEeCCHHHHHHHHHHCCCEeecCCCcC-CCCCEEEEEECCCCCEEEEEe
Confidence            999999999999999999999998766433 344589999999999999987

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.83  E-value=3e-20  Score=137.80  Aligned_cols=132  Identities=12%  Similarity=0.161  Sum_probs=94.6

Q ss_pred             CcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCC-C--CCCCCCCCCCce
Q 029305            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDN-L--PKAGKNINPKDN   84 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~-~--~~~~~~~~~g~~   84 (195)
                      ||++.+|+||.|.|+|++++++||+++|||++..+.+.   ...| ....+..+.++....... .  .........|..
T Consensus         3 m~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~---~~~~-~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~   78 (160)
T 3r4q_A            3 MKPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG---QLVF-FKCGRQMLLLFDPQESSRADANNPIPRHGAVGQG   78 (160)
T ss_dssp             -CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT---TEEE-EEETTEEEEEECHHHHTCCCTTCCSCCCEEEEEC
T ss_pred             ccccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC---cEEE-EeCCCEEEEEEecCCccCccccCCCCcCCCccee
Confidence            46789999999999999999999999999999886542   1233 223344455544322111 0  011113345679


Q ss_pred             EEEEEe---CCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCc
Q 029305           85 HISFQC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGD  148 (195)
Q Consensus        85 Hiaf~v---~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~  148 (195)
                      |++|.|   +|+++++++|+++|+++...+...+  +.+.+||.|||||.|||++.   +.|+..++
T Consensus        79 hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~--g~~~~~~~DPdG~~iel~~~---~~~~~d~~  140 (160)
T 3r4q_A           79 HFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPN--GSYSVYIRDPAGNSVEVGEG---KLWGFEAE  140 (160)
T ss_dssp             EEEEEESSHHHHHHHHHHHHTTTCCCCEEEECTT--SCEEEEEECTTCCEEEEEEG---GGGTCCCC
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCEEeccccccC--CcEEEEEECCCCCEEEEEeC---CCCCcccc
Confidence            999999   7999999999999999875542222  45899999999999999996   66777665

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.83  E-value=1.4e-20  Score=139.65  Aligned_cols=131  Identities=15%  Similarity=0.185  Sum_probs=91.8

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEee-cCcEEEEeeeCCCCCCCCCC-CCCCCCceEEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFN-YGMGIHLLKSEEPDNLPKAG-KNINPKDNHIS   87 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~g~~~~ll~~~~~~~~~~~~-~~~~~g~~Hia   87 (195)
                      ++++|+||.|.|+|++++++||+++|||++..+....+....+..+. .+..++|++...+....... ...+.|+.|+|
T Consensus         5 ~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hia   84 (161)
T 3oa4_A            5 KSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHIA   84 (161)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEEE
T ss_pred             ccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEEE
Confidence            47899999999999999999999999999877532111111222333 34667888765432111000 02246789999


Q ss_pred             EEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEE--ECCCCCEEEEEecCCC
Q 029305           88 FQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFF--HDPDGSMIEICNCDVL  140 (195)
Q Consensus        88 f~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~--~DPdGn~iEi~~~~~~  140 (195)
                      |.|+|+++++++|+++|+++..........+.+.+|+  .|||||.|||++....
T Consensus        85 f~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           85 IGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             EECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCCC
T ss_pred             EEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCCc
Confidence            9999999999999999999877622223334456666  3999999999997553

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.83  E-value=1.3e-20  Score=157.69  Aligned_cols=160  Identities=14%  Similarity=0.108  Sum_probs=112.4

Q ss_pred             CCCCCCCCc----ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCc----EEEEeeeCCCCCC
Q 029305            1 MKESVENPL----CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGM----GIHLLKSEEPDNL   72 (195)
Q Consensus         1 m~~~~~~~~----~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~----~~~ll~~~~~~~~   72 (195)
                      |++.++.|.    .|++|+||.|.|+||+++++||+++|||++..+.+    +.++ +...+.    .+.+.  .     
T Consensus         1 Ms~~~P~P~~P~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~----~~~~-lr~~~~~~~~~l~l~--~-----   68 (365)
T 4ghg_A            1 MSNEIPKPVAPAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE----NQIY-LRSFEEFIHHNLVLT--K-----   68 (365)
T ss_dssp             --CCCCCCSSCCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SEEE-EECTTCCSSCSEEEE--E-----
T ss_pred             CCCCCCCCCCCCCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC----CEEE-EEeCCCCcceEEEec--c-----
Confidence            777776553    47899999999999999999999999999988765    2333 222221    12221  1     


Q ss_pred             CCCCCCCCCCceEEEEEeC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcc
Q 029305           73 PKAGKNINPKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDA  149 (195)
Q Consensus        73 ~~~~~~~~~g~~Hiaf~v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~  149 (195)
                           ...+++.|++|.|.   +++++.++|+++|+++...+......+.+.+||.|||||.|||+........+.....
T Consensus        69 -----~~~~gl~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~  143 (365)
T 4ghg_A           69 -----GPVAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYD  143 (365)
T ss_dssp             -----CSSCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCTT
T ss_pred             -----CCCCCcceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeecccccccccc
Confidence                 22357899999998   5888999999999998765533222245799999999999999986553332221110


Q ss_pred             hhhcccccccchhhhhhhhhhcCCCCCCCcccccccccccccc
Q 029305          150 VRIRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                       ..              ....+.++.|+++.++|+.++.+||.
T Consensus       144 -~~--------------~~~~~~rlgHV~L~v~D~~~t~~Fy~  171 (365)
T 4ghg_A          144 -LY--------------SAGELVRLDHFNQVTPDVPRGRKYLE  171 (365)
T ss_dssp             -TC--------------CTTCCCEEEEEEEEESCHHHHHHHHH
T ss_pred             -cc--------------ccccCcceeEEEEeecCHHHHHHHHH
Confidence             00              01234568999999999999999984

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.82  E-value=2.3e-19  Score=131.63  Aligned_cols=119  Identities=20%  Similarity=0.296  Sum_probs=85.1

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEee--cCcEEEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFN--YGMGIHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      +++++|+||.|.|+|++++++||+++|||++..+.+.    .+  .+.  .|..+.++.......   .. ....+..|+
T Consensus         2 ~m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~----~~--~~~~~~g~~l~l~~~~~~~~---~~-~~~~~~~~l   71 (148)
T 3rhe_A            2 VMLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSPT----FA--MFVMKTGLRLGLWAQEEIEP---KA-HQTGGGMEL   71 (148)
T ss_dssp             -----CEEEEEEESCHHHHHHHHHHHHTCCCSEECSS----EE--EEECTTSCEEEEEEGGGCSS---CC-C----CEEE
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCCC----EE--EEEcCCCcEEEEecCCcCCc---cc-cCCCCeEEE
Confidence            3567899999999999999999999999999876531    12  333  456676665442211   11 334567899


Q ss_pred             EEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           87 SFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        87 af~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +|.|++   +++++++|+++|+++..++.... ++ +.+||.|||||.|||++..+
T Consensus        72 ~f~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~-~G-~~~~~~DPdG~~iel~~~~~  125 (148)
T 3rhe_A           72 SFQVNSNEMVDEIHRQWSDKEISIIQPPTQMD-FG-YTFVGVDPDEHRLRIFCLKR  125 (148)
T ss_dssp             EEECSCHHHHHHHHHHHHHTTCCEEEEEEEET-TE-EEEEEECTTCCEEEEEEEC-
T ss_pred             EEEcCCHHHHHHHHHHHHhCCCEEEeCCeecC-CC-cEEEEECCCCCEEEEEEcCh
Confidence            999987   99999999999999987664432 34 89999999999999999654

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.82  E-value=2.2e-19  Score=130.83  Aligned_cols=133  Identities=14%  Similarity=0.190  Sum_probs=93.0

Q ss_pred             CCCCCCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCC-----------CCCCccEEEeec--C-cEEEEeeeCC
Q 029305            3 ESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS-----------FDFDGACRLFNY--G-MGIHLLKSEE   68 (195)
Q Consensus         3 ~~~~~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~-----------~~~~~~~~~~~~--g-~~~~ll~~~~   68 (195)
                      +.|++ +++++|+|+.|.|+|++++.+||++ |||++..+...           .+....+..+..  | ..++|++...
T Consensus         2 ~~M~~-~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~   79 (153)
T 1ss4_A            2 NAMAK-NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLT   79 (153)
T ss_dssp             -CCTT-CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEE
T ss_pred             CCCCc-ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecC
Confidence            34544 3678999999999999999999999 99998754210           000112223443  3 5677776532


Q ss_pred             CCCCC-C-CCCCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           69 PDNLP-K-AGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        69 ~~~~~-~-~~~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      +.... . .......|..|++|.|+|+++++++|+++|+++..++.... ++.+.+||.|||||.|||++..
T Consensus        80 ~~~~~~~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           80 PPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYE-NSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             SCCCCBCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEET-TTEEEEEEECGGGCEEEEEEEC
T ss_pred             CCCcccccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccC-CceEEEEEECCCCCEEEEEecc
Confidence            22211 0 01133456789999999999999999999999987764332 4568999999999999999853

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.82  E-value=2.6e-19  Score=129.98  Aligned_cols=121  Identities=16%  Similarity=0.216  Sum_probs=86.2

Q ss_pred             CCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCC--CCCccEEEeec---CcEEEEeeeCCCCCCCCCCCCCCC
Q 029305            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--DFDGACRLFNY---GMGIHLLKSEEPDNLPKAGKNINP   81 (195)
Q Consensus         7 ~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~---g~~~~ll~~~~~~~~~~~~~~~~~   81 (195)
                      ++|++.+|+||.|.|+|++++.+||+++|||++..+....  .+...+.....   +..++|.+.......     ....
T Consensus         2 ~~m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~-----~~~~   76 (144)
T 2c21_A            2 SHMPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSY-----KHDE   76 (144)
T ss_dssp             ----CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCC-----CCCS
T ss_pred             CCCccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCC-----CCCC
Confidence            4577899999999999999999999999999998653211  01112311222   256777765432111     2345


Q ss_pred             CceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEE-EEECCCCCEEEEEecC
Q 029305           82 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQL-FFHDPDGSMIEICNCD  138 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~-~~~DPdGn~iEi~~~~  138 (195)
                      +..|++|.|+|+++++++|+++|+++...    ++  .+.+ ||.|||||.|||++..
T Consensus        77 ~~~h~~f~v~d~~~~~~~l~~~G~~~~~~----~g--~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           77 AYGHIAIGVEDVKELVADMRKHDVPIDYE----DE--SGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             SEEEEEEEESCHHHHHHHHHHTTCCEEEE----CS--SSSEEEEECTTSCEEEEEEHH
T ss_pred             CceEEEEEeCCHHHHHHHHHHCCCEEecc----CC--cEEEEEEECCCCCEEEEEEcC
Confidence            78999999999999999999999998765    22  2344 9999999999999853

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.82  E-value=3.7e-20  Score=150.83  Aligned_cols=160  Identities=13%  Similarity=0.152  Sum_probs=110.8

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC----cEEEEeeeCCCCCCCCCCCCCCCCce
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG----MGIHLLKSEEPDNLPKAGKNINPKDN   84 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~~ll~~~~~~~~~~~~~~~~~g~~   84 (195)
                      |.+++|+||.|.|+|++++.+||+++|||++..+.+.   ...+ +...+    ..+.+...            ...+..
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~---~~~~-l~~~~~~~~~~l~l~~~------------~~~~~~   67 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQ---GRVY-FKCWDERDHSCYIIREA------------DTAGID   67 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECTT---SCEE-EECTTCCBSCSEEEEEC------------SSCEEE
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcCC---CeEE-EEeccCCCceEEEEEeC------------CCCcee
Confidence            5678999999999999999999999999999877531   2233 22212    22333211            124689


Q ss_pred             EEEEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccch
Q 029305           85 HISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNC  161 (195)
Q Consensus        85 Hiaf~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~~  161 (195)
                      |++|.|++   ++++.++|+++|+++...+......+.+.+||.|||||.|||++......++...       . ++...
T Consensus        68 h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~-------~-~p~~~  139 (309)
T 3hpy_A           68 FFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKTCVGNGISE-------V-NPAPW  139 (309)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCCSSCS-------B-SCCSC
T ss_pred             EEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccceecccccc-------c-CCCCC
Confidence            99999996   9999999999999987665321122457999999999999999976533322110       0 11111


Q ss_pred             hhhhhhhhhcCCCCCCCcccccccccccccc
Q 029305          162 NFHQQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                      ..-......+..|+|+.+.++|++++.+||.
T Consensus       140 ~~~~~~~~~~~~i~Hv~l~v~D~~~~~~FY~  170 (309)
T 3hpy_A          140 NAQREHGIAPIQLDHCLLYGPNIAEVQKIFT  170 (309)
T ss_dssp             CGGGGSSSCCSEEEEEEEEESCHHHHHHHHH
T ss_pred             ccccCCCcccceeeeEEEEeCCHHHHHHHHH
Confidence            0001112357889999999999999999994

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.82  E-value=9.5e-19  Score=125.32  Aligned_cols=118  Identities=17%  Similarity=0.232  Sum_probs=87.6

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEee-cCcEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFN-YGMGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      ..++|+||.|.|+|++++++||+++|||++....+      .|..+. .|..+.+....... .+     ...+..|++|
T Consensus         6 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g~~~~l~~~~~~~-~~-----~~~~~~h~~~   73 (135)
T 3rri_A            6 NPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFGDQLVCHLSDRWD-RE-----VSMYPRHFGI   73 (135)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECSCSC-SS-----CCSSSCEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeCCEEEEEEcCccc-cc-----CCCCCCeEEE
Confidence            35679999999999999999999999999976543      233444 34455554433221 11     2345789999


Q ss_pred             EeC---CHHHHHHHHHhCCCeEeccceec--C-CcceEEEEEECCCCCEEEEEecCC
Q 029305           89 QCE---NMAIVERRLKEMKIDYVKSRVEE--G-GINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        89 ~v~---dl~~~~~~l~~~gv~~~~~~~~~--~-~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      .+.   |+++++++|+++|+++...+...  + ..+.+.+||.|||||.|||++..+
T Consensus        74 ~~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~  130 (135)
T 3rri_A           74 TFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFD  130 (135)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESS
T ss_pred             EEcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECC
Confidence            996   59999999999999987766442  2 124578999999999999999754

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.82  E-value=9.7e-19  Score=124.77  Aligned_cols=121  Identities=21%  Similarity=0.272  Sum_probs=86.6

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec-----CcEEEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY-----GMGIHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-----g~~~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      ++|+|+.|.|+|++++.+||+++|||++..+....+....+..+..     +..+++........    . ....+..|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~-~~~~~~~~~   75 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK----Y-ELGTAYGHI   75 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCC----C-CCCSSEEEE
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCc----c-cCCCCccEE
Confidence            3689999999999999999999999998875421110111112332     34577665433211    1 234577899


Q ss_pred             EEEeCCHHHHHHHHHhCCCeEeccceecCCcc-eEEEEEECCCCCEEEEEecC
Q 029305           87 SFQCENMAIVERRLKEMKIDYVKSRVEEGGIN-VDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        87 af~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~-~~~~~~~DPdGn~iEi~~~~  138 (195)
                      +|.|+|+++++++|+++|+++...+.... ++ .+.+||.|||||.|||++..
T Consensus        76 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~~DPdG~~iel~~~~  127 (135)
T 1f9z_A           76 ALSVDNAAEACEKIRQNGGNVTREAGPVK-GGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             EEECSCHHHHHHHHHHTTCEEEEEEEECT-TSCCEEEEEECTTSCEEEEEEC-
T ss_pred             EEEeCCHHHHHHHHHHCCCEEecCCccCC-CCceeEEEEECCCCCEEEEEecC
Confidence            99999999999999999999987654332 22 36789999999999999954

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.81  E-value=1.5e-19  Score=133.36  Aligned_cols=128  Identities=17%  Similarity=0.173  Sum_probs=92.1

Q ss_pred             CCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCC--------------CCccEEEee-cCcEEEEeeeCCCCC
Q 029305            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD--------------FDGACRLFN-YGMGIHLLKSEEPDN   71 (195)
Q Consensus         7 ~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~--------------~~~~~~~~~-~g~~~~ll~~~~~~~   71 (195)
                      ++.++++|+||.|.|+|++++++||+++|||++..+....+              ......++. .+..++|++......
T Consensus        13 ~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~~~~~~   92 (159)
T 3gm5_A           13 NILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDENPS   92 (159)
T ss_dssp             SCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEECSSSC
T ss_pred             cccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEECCCCC
Confidence            44678999999999999999999999999999765321100              011111233 346788887653221


Q ss_pred             CCCCC-CCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCC--CCEEEEEec
Q 029305           72 LPKAG-KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPD--GSMIEICNC  137 (195)
Q Consensus        72 ~~~~~-~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPd--Gn~iEi~~~  137 (195)
                      ..... .....|+.|+||.|+|+++++++|+++|+++...+.. .  +.+.+||.|||  |+.|||++.
T Consensus        93 ~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~-~--g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           93 TWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDF-E--GGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             HHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEE-T--TEEEEEESCHHHHSSEEEEEEE
T ss_pred             hhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeecccc-C--CeeEEEEeccccCcEEEEEEec
Confidence            10000 0135678999999999999999999999999776532 2  35899999999  999999985

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.81  E-value=5.3e-19  Score=127.90  Aligned_cols=115  Identities=23%  Similarity=0.346  Sum_probs=87.8

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      |+++|+||.|.|+|++++.+||+++|||++..+.+    ...+ +...+..+.+......  .+. . ....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~-~~~~~~~l~l~~~~~~--~~~-~-~~~~~~~hi~~~   71 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN----TGAY-LTCGDLWVCLSYDEAR--QYV-P-PQESDYTHYAFT   71 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET----TEEE-EEETTEEEEEEECTTC--CCC-C-GGGSCSCEEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC----CcEE-EEECCEEEEEEECCCC--CCC-C-CCCCCceEEEEE
Confidence            46889999999999999999999999999987643    2343 3333445666554321  111 1 334678999999


Q ss_pred             eC--CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           90 CE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        90 v~--dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      |+  |+++++++|+++|+++...+..    +.+.+||.|||||.|||++.
T Consensus        72 v~~~d~~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~  117 (141)
T 1npb_A           72 VAEEDFEPLSQRLEQAGVTIWKQNKS----EGASFYFLDPDGHKLELHVG  117 (141)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCCS----SSEEEEEECTTCCEEEEEEC
T ss_pred             eCHHHHHHHHHHHHHCCCeEeccCCC----ceeEEEEECCCCCEEEEEEC
Confidence            97  9999999999999998876532    23799999999999999984

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.81  E-value=6.5e-19  Score=125.76  Aligned_cols=118  Identities=20%  Similarity=0.348  Sum_probs=85.5

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCC--c-cEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD--G-ACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~--~-~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      |+++|+|+.|.|+|++++.+||+++|||++..+.+...+.  . .+ +...+..+.+.....         ....+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~-~~~~~~~l~l~~~~~---------~~~~~~~h~   70 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKF-FLIAGLWICIMEGDS---------LQERTYNHI   70 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEE-EEETTEEEEEEECSS---------CCCCCSCEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceE-EEeCCEEEEEecCCC---------CCCCCeeEE
Confidence            4688999999999999999999999999998754321110  0 03 223344555554321         114568899


Q ss_pred             EEEeC--CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           87 SFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        87 af~v~--dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      +|.|+  |+++++++|+++|+++...+.... ++.+.+||.|||||.|||++..
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           71 AFQIQSEEVDEYTERIKALGVEMKPERPRVQ-GEGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCEECCCCCCT-TCCCEEEEECSSSCEEEEECSS
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCCccCC-CCeeEEEEECCCCCEEEEEcCC
Confidence            99995  999999999999999987764322 2347899999999999999853

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.81  E-value=3.5e-19  Score=130.16  Aligned_cols=124  Identities=17%  Similarity=0.165  Sum_probs=83.9

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCC---CCCCCCCCCCCCceEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD---NLPKAGKNINPKDNHI   86 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~---~~~~~~~~~~~g~~Hi   86 (195)
                      ...+|.||+|.|+|+++|++||++ ||+.........  ...+.....+..+.++......   ..... .....+..|+
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   81 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDE--SCACMVVSEQAFVMLIDRARFADFTSKPIA-DATATTEAIV   81 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBT--TEEEEEEETTEEEEEEEHHHHGGGCSSCBC-CTTTCBSCEE
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCC--ceeEEeecCcceEeeeccccccccccccCC-CCCCCCeeEE
Confidence            357899999999999999999998 555554433211  1222133344444443322110   11111 1344566899


Q ss_pred             EEEeC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           87 SFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        87 af~v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +|.|+   +++++++++.+.|+.+..++...++  ++++||+|||||.|||++..+
T Consensus        82 a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~~~p  135 (149)
T 4gym_A           82 CVSAIDRDDVDRFADTALGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMWMSA  135 (149)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEEECT
T ss_pred             EEEeccHHHHHHHHHHHHhcCceeeccccccCC--EEEEEEEcCCCCEEEEEEECh
Confidence            99997   5888999999999999888755443  489999999999999998655

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.81  E-value=3.5e-19  Score=128.59  Aligned_cols=117  Identities=17%  Similarity=0.315  Sum_probs=85.7

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCcc---EEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGA---CRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~---~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      |+++|+|+.|.|+|++++.+||+++|||++..+.+...+...   + +...+..+.+.....   .      ...+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~~~g~~~l~l~~~~~---~------~~~~~~h~   70 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKF-FLIGDIWVAIMQGEK---L------AERSYNHI   70 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEE-EEETTEEEEEEECCC---C------SSCCSCEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEE-EEECCEEEEEEeCCC---C------CCCCeeEE
Confidence            367899999999999999999999999999876432111110   3 223444566654321   1      13568999


Q ss_pred             EEEeC--CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           87 SFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        87 af~v~--dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +|.|+  |+++++++|+++|+++...+.... ++.+.+||.|||||.|||++.
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           71 AFKIDDADFDRYAERVGKLGLDMRPPRPRVE-GEGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCcccCC-CCeEEEEEECCCCCEEEEEeC
Confidence            99999  999999999999999877653322 245799999999999999985

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.81  E-value=2.2e-19  Score=130.12  Aligned_cols=129  Identities=12%  Similarity=0.259  Sum_probs=88.9

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-------cEEEEeeeCCCCCCCCC-CCCCC
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-------MGIHLLKSEEPDNLPKA-GKNIN   80 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-------~~~~ll~~~~~~~~~~~-~~~~~   80 (195)
                      .++.+|+||.|.|+|++++++||+++|||++..+....+....+..+..+       ..++|++.......... .....
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~   84 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   84 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCC
Confidence            46789999999999999999999999999987653211001112233332       45778776543211000 00122


Q ss_pred             --CCceEEEEEeCCHHHHHHHHHhCCCeEe-ccceecCCcceEEEEE--ECCCCCEEEEEecC
Q 029305           81 --PKDNHISFQCENMAIVERRLKEMKIDYV-KSRVEEGGINVDQLFF--HDPDGSMIEICNCD  138 (195)
Q Consensus        81 --~g~~Hiaf~v~dl~~~~~~l~~~gv~~~-~~~~~~~~~~~~~~~~--~DPdGn~iEi~~~~  138 (195)
                        .|..|++|.|+|+++++++|+++|+++. ..+.. ..++.+.+|+  .|||||.|||++..
T Consensus        85 ~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~-~~~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           85 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKL-GTGGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEE-CSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCceEEEEEECCCHHHHHHHHHHCCCeecCcCccc-CCCceEEEEEeecCCCcEEEEEEecC
Confidence              5788999999999999999999999987 33432 2233356666  89999999999853

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.81  E-value=1.9e-19  Score=143.46  Aligned_cols=149  Identities=15%  Similarity=0.176  Sum_probs=106.5

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      ..+++|+||.|.|+|++++.+||+++|||++..+.+.    .++ +...+..+.+....          ....+..|++|
T Consensus        22 ~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~~----~~~-L~~g~~~l~l~~~~----------~~~~~~~hiaf   86 (252)
T 3pkv_A           22 GHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQAD----AFT-IQLGVSQIQFRAAA----------DGTKPFYHIAI   86 (252)
T ss_dssp             ---CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECSS----EEE-EEETTEEEEEEECC----------TTCCCCCEEEE
T ss_pred             CcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccCC----EEE-EEeCCEEEEEEECC----------CCCCCeeEEEE
Confidence            4578999999999999999999999999999877542    232 22333445544332          11235889999


Q ss_pred             EeC--CHHHHHHHHHhCCCeEecc-cee---cCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccchh
Q 029305           89 QCE--NMAIVERRLKEMKIDYVKS-RVE---EGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCN  162 (195)
Q Consensus        89 ~v~--dl~~~~~~l~~~gv~~~~~-~~~---~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~~~  162 (195)
                      .|+  ++++++++|+++ +++... +..   ...++.+.+||.|||||.|||++.....  ++        .. .+++. 
T Consensus        87 ~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~~~--~~--------~~-~~~~~-  153 (252)
T 3pkv_A           87 NIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQAA--PV--------LD-KPFSA-  153 (252)
T ss_dssp             EECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESSSS--CC--------CC-SCCCG-
T ss_pred             EecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCCCC--cc--------cc-CCCCH-
Confidence            987  799999999999 988652 211   1234668999999999999999975533  11        12 23332 


Q ss_pred             hhhhhhhhcCCCCCCCccccccccccccc
Q 029305          163 FHQQQIQQEPQINPQSCLSDSIHAKEDFL  191 (195)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (195)
                            ...-.+.|+++.++|+.++.+||
T Consensus       154 ------~~i~glghV~L~v~d~~~~~~fl  176 (252)
T 3pkv_A          154 ------DQLLSIGEINITTSDVEQAATRL  176 (252)
T ss_dssp             ------GGCCEEEEEEEECSCHHHHHHHH
T ss_pred             ------HHCcEeeeEEEEeCCHHHHHHHH
Confidence                  12456889999999999999998

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.80  E-value=8.9e-19  Score=125.80  Aligned_cols=112  Identities=26%  Similarity=0.367  Sum_probs=86.6

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      |+++|+||.|.|+|++++.+||+++|||++..+.+    ...| +...+..+.+.....   .+    ....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~~~-~~~~~~~l~l~~~~~---~~----~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD----QGAY-LELGSLWLCLSREPQ---YG----GPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEE-EEETTEEEEEEECTT---CC----CCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC----CceE-EecCCEEEEEEeCCC---CC----CCCCCcceEEEE
Confidence            36789999999999999999999999999987643    2333 323344555554321   11    334578899999


Q ss_pred             eC--CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           90 CE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        90 v~--dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      |+  |+++++++|+++|+++...+..    +.+.+||.|||||.|||++.
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~  114 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRS----EGDSFYFLDPDGHRLEAHVG  114 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCS----SSCEEEEECTTCCEEEEESC
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCC----CeEEEEEECCCCCEEEEEEC
Confidence            98  9999999999999998876532    23789999999999999975

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.80  E-value=9.2e-19  Score=125.22  Aligned_cols=115  Identities=17%  Similarity=0.264  Sum_probs=81.3

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeec-CCCCCCCccEEEee--cCcEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRR-PGSFDFDGACRLFN--YGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~-~~~~~~~~~~~~~~--~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      ...|+||.|.|+|++++++||++ |||++..+ .+    .+.|..+.  .+..+.+...... .      ....+..|++
T Consensus         4 ~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~----~~~~~~~~~~~~~~l~l~~~~~~-~------~~~~~~~~l~   71 (128)
T 3g12_A            4 SLLITSITINTSHLQGMLGFYRI-IGFQFTASKVD----KGSEVHRAVHNGVEFSLYSIQNP-Q------RSQIPSLQLG   71 (128)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC---------CCEEEEEETTEEEEEEECCCC-S------SCCCCSEEEE
T ss_pred             cceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCC----CCCEEEEEeCCCeEEEEEECCCC-c------CCCCCceEEE
Confidence            35799999999999999999999 99998876 32    11222333  4455555332211 0      2233457899


Q ss_pred             EEeCCHHHHHHHHHhCCCe-EeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           88 FQCENMAIVERRLKEMKID-YVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        88 f~v~dl~~~~~~l~~~gv~-~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      |.|+|+++++++|+++|++ +..++.. ..++.+ ++|.|||||.|||.+..+
T Consensus        72 f~v~dvd~~~~~l~~~G~~~~~~~p~~-~~~G~~-~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           72 FQITDLEKTVQELVKIPGAMCILDPTD-MPDGKK-AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             EEESCHHHHHHHHTTSTTCEEEEEEEE-CC-CEE-EEEECTTCCEEEEEC---
T ss_pred             EEeCCHHHHHHHHHHCCCceeccCcee-CCCccE-EEEECCCCCEEEEEEecc
Confidence            9999999999999999999 7665533 234445 999999999999999765

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.79  E-value=1.9e-18  Score=124.52  Aligned_cols=123  Identities=15%  Similarity=0.128  Sum_probs=89.0

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEee--cCcEEEEeeeCCCCC-CCCCCCCCCCCceEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFN--YGMGIHLLKSEEPDN-LPKAGKNINPKDNHIS   87 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--~g~~~~ll~~~~~~~-~~~~~~~~~~g~~Hia   87 (195)
                      +++|+|+.|.|+|++++++||++ |||++..+.+.    ..|..+.  .+..+.+........ .+........+..|++
T Consensus         2 ~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~----~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~   76 (138)
T 2a4x_A            2 SARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADS----APHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIA   76 (138)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGG----CSEEEEECTTSCEEEEEEHHHHHHHCTTCCCCBSSCSEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCC----CceEEEEcCCCeEEEEecCccchhhCcccCCCCCCCeEEEE
Confidence            46899999999999999999999 99998875431    2233343  345566664321000 0000013345789999


Q ss_pred             EEeC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           88 FQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        88 f~v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      |.|+   |+++++++|+++|+++..++... .++.+.+||.|||||.|||++..+
T Consensus        77 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~~~  130 (138)
T 2a4x_A           77 FEFPDTASVDKKYAELVDAGYEGHLKPWNA-VWGQRYAIVKDPDGNVVDLFAPLP  130 (138)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCEEEEEEEE-TTTEEEEEEECTTCCEEEEEEECT
T ss_pred             EEeCCHHHHHHHHHHHHHCCCceeeCCccc-CCCcEEEEEECCCCCEEEEEeCCc
Confidence            9999   99999999999999988766433 335689999999999999999764

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.79  E-value=5.6e-19  Score=143.56  Aligned_cols=153  Identities=15%  Similarity=0.189  Sum_probs=108.8

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEee-cCCCCCCCccEEEeecC---cEEEEeeeCCCCCCCCCCCCCCCCce
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIR-RPGSFDFDGACRLFNYG---MGIHLLKSEEPDNLPKAGKNINPKDN   84 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~-~~~~~~~~~~~~~~~~g---~~~~ll~~~~~~~~~~~~~~~~~g~~   84 (195)
                      |.+++|+||.|.|+|++++++||+++|||++.. +.+    ...+  +..+   ..+.+...            ...+..
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~----~~~~--~~~~~~~~~l~l~~~------------~~~~~~   63 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGED----DRIY--LRMDRWHHRIVLHAD------------GSDDLA   63 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSCT----TEEE--EECSSBSCSEEEECS------------SCCEEE
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccCC----CeEE--EEeCCCeEEEEEEEC------------CCCCeE
Confidence            568999999999999999999999999999987 322    2233  2222   33444321            124678


Q ss_pred             EEEEEeC---CHHHHHHHHHhCCCeEeccceec--CCcceEEEEEECCCCCEEEEEec-CCCCCCCCCCcchhhcccccc
Q 029305           85 HISFQCE---NMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNC-DVLPVVPLAGDAVRIRSCTST  158 (195)
Q Consensus        85 Hiaf~v~---dl~~~~~~l~~~gv~~~~~~~~~--~~~~~~~~~~~DPdGn~iEi~~~-~~~~~~p~~~~~~~~~~~~~~  158 (195)
                      |++|.|+   |+++++++|+++|+++...+...  ...+.+.+||.|||||.|||++. .....++....    .....+
T Consensus        64 ~~~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~----~~~~~~  139 (305)
T 2wl9_A           64 YIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPG----RPMFGK  139 (305)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEEECBCTTSCCCCS----SCCSSC
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEECCCccCCCCcCCC----CCcccc
Confidence            9999997   69999999999999987665322  11245889999999999999987 33333433211    001011


Q ss_pred             cchhhhhhhhhhcCCCCCCCccccccccccccc
Q 029305          159 VNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFL  191 (195)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (195)
                      +.        ....+|+|+.+.++|++++.+||
T Consensus       140 ~~--------~~~~~i~hv~l~v~D~~~s~~FY  164 (305)
T 2wl9_A          140 FV--------TEGQGLGHIIIREDDVEEATRFY  164 (305)
T ss_dssp             BC--------CTTTCSCEEEECCSCHHHHHHHH
T ss_pred             ee--------cCCceeeeEEEECCCHHHHHHHH
Confidence            11        23568999999999999999998

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.79  E-value=2e-18  Score=130.52  Aligned_cols=128  Identities=23%  Similarity=0.298  Sum_probs=88.9

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec--------------------CcEEEEeeeCCC
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY--------------------GMGIHLLKSEEP   69 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--------------------g~~~~ll~~~~~   69 (195)
                      ...+|+||.|.|+|++++++||+++|||++..+....+.......+..                    +..++|+.....
T Consensus        31 ~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  110 (187)
T 3vw9_A           31 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGT  110 (187)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTG
T ss_pred             ceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCC
Confidence            457899999999999999999999999999875431110101112222                    246777554432


Q ss_pred             CCCCCC----CCCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           70 DNLPKA----GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        70 ~~~~~~----~~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ...+..    ......+..|++|.|+|+++++++|+++|+++...+.. ..+ ...+||.|||||.|||++...
T Consensus       111 ~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~-~~~-~~~~~~~DPdG~~iel~~~~~  182 (187)
T 3vw9_A          111 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDD-GKM-KGLAFIQDPDGYWIEILNPNK  182 (187)
T ss_dssp             GGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTS-SSS-TTCEEEECTTCCEEEEECGGG
T ss_pred             CCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCcc-CCc-ceEEEEECCCCCEEEEEEccc
Confidence            111111    01233578899999999999999999999999887633 222 246899999999999999643

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.79  E-value=8.8e-19  Score=128.42  Aligned_cols=122  Identities=13%  Similarity=0.215  Sum_probs=84.2

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCC-CCCCCCceEEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAG-KNINPKDNHIS   87 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~-~~~~~g~~Hia   87 (195)
                      |..+|+|+.|.|+|++++++||+++|||++....+     ..+..+..+ ..++|+....+....... .....+ .|++
T Consensus        22 M~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g-~~l~   95 (148)
T 2r6u_A           22 MTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEIPD-----MDYSMVTTGPVGESGMPDEPGYINGGMMQRGEVTT-PVVT   95 (148)
T ss_dssp             TCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEETT-----TTEEEEECSCBCTTSSBCSSSCBCEEEEESSSSCS-CEEE
T ss_pred             cCCceEEEEEEeCCHHHHHHHHHHccCcEEEECCC-----CCEEEEEeCCcceeecccCCcccccceeecCCCCe-EEEE
Confidence            34789999999999999999999999999987432     122233333 222222221110000000 011134 4999


Q ss_pred             EEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           88 FQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        88 f~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      |.|+|+++++++|+++|+++..++....+++ +.+||.|||||.|||++..
T Consensus        96 f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           96 VDVESIESALERIESLGGKTVTGRTPVGNMG-FAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEEETTTE-EEEEEECTTSCEEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHcCCeEecCCeecCCCE-EEEEEECCCCCEEEEEecC
Confidence            9999999999999999999987764444333 8999999999999999854

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.79  E-value=1.3e-18  Score=127.08  Aligned_cols=124  Identities=20%  Similarity=0.271  Sum_probs=90.9

Q ss_pred             CCcccCccceEEEEcCCHHHHHHHH---HhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCc
Q 029305            7 NPLCLKSLNHISLVCRSVEASLDFY---QNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKD   83 (195)
Q Consensus         7 ~~~~i~~i~hv~l~v~dl~~s~~FY---~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~   83 (195)
                      +.+++.+|+|+.|.|+|++++.+||   +++|||++..+.+.   ...| .. .+..+.|++...+....... ....+.
T Consensus        14 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~---~~~~-~~-g~~~l~l~~~~~~~~~~~~~-~~~~g~   87 (146)
T 3ct8_A           14 NLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR---GKSY-KH-GKTYLVFVQTEDRFQTPTFH-RKRTGL   87 (146)
T ss_dssp             CTTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT---EEEE-EE-TTEEEEEEECCGGGSCSCCC-TTSSSC
T ss_pred             ccccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC---CceE-ec-CCeEEEEEEcCCCccccccc-ccCCCc
Confidence            4567899999999999999999999   99999999876432   1234 33 44567776554210001101 233567


Q ss_pred             eEEEEEeC---CHHHHHHHHHhCCCeEecc-cee-cCCcceEEEEEECCCCCEEEEEe
Q 029305           84 NHISFQCE---NMAIVERRLKEMKIDYVKS-RVE-EGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        84 ~Hiaf~v~---dl~~~~~~l~~~gv~~~~~-~~~-~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      .|++|.|+   |+++++++|+++|+++... +.. ..+.+.+.+||.|||||.|||++
T Consensus        88 ~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~  145 (146)
T 3ct8_A           88 NHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVA  145 (146)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEEC
T ss_pred             eEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEe
Confidence            99999999   9999999999999998773 322 23334579999999999999986

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.79  E-value=3e-19  Score=147.72  Aligned_cols=160  Identities=17%  Similarity=0.222  Sum_probs=110.3

Q ss_pred             CcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC----cEEEEeeeCCCCCCCCCCCCCCCCc
Q 029305            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG----MGIHLLKSEEPDNLPKAGKNINPKD   83 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~~ll~~~~~~~~~~~~~~~~~g~   83 (195)
                      ++.+++|+||.|.|+|++++++||+++|||++..+.+    ...+ +...+    ..+.+..            ....++
T Consensus         6 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~~~-l~~~~~~~~~~l~l~~------------~~~~g~   68 (339)
T 3lm4_A            6 RFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG----QSVY-LRGYEDPYPWSLKITE------------APEAGM   68 (339)
T ss_dssp             GGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET----TEEE-EECTTCSSSCSEEEEE------------CSSCEE
T ss_pred             CCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC----CEEE-EEecCCCCceEEEEee------------CCCCCc
Confidence            4678999999999999999999999999999987743    2233 22211    1222221            113468


Q ss_pred             eEEEEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccc
Q 029305           84 NHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVN  160 (195)
Q Consensus        84 ~Hiaf~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~  160 (195)
                      .|++|.|++   ++++.++|+++|+++...+...+  +.+.+||.|||||.|||+........+......+.... .+..
T Consensus        69 ~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~--~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~-~~~~  145 (339)
T 3lm4_A           69 GHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFG--YGKTFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRP-SKKP  145 (339)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCEEEECCSTT--BCCEEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCS-SCCC
T ss_pred             ceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCCC--ceEEEEEECCCCCEEEEEEeeeEcCCCccccccccCcc-cccC
Confidence            999999996   99999999999999987653222  34799999999999999987553321110000000001 1111


Q ss_pred             hhhhhhhhhhcCCCCCCCcccccccccccccc
Q 029305          161 CNFHQQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                      .     ....+.+|+|+++.++|++++.+||.
T Consensus       146 ~-----~g~~~~~l~Hv~l~v~D~~~a~~FY~  172 (339)
T 3lm4_A          146 L-----QGIPVKRIDHLNLMSSDVTAVKDSFE  172 (339)
T ss_dssp             S-----BSSCCCEEEEEEEEESCHHHHHHHHH
T ss_pred             C-----CCCCcceeeeEEEEcCCHHHHHHHHH
Confidence            1     12246789999999999999999994

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.79  E-value=3.5e-19  Score=144.71  Aligned_cols=159  Identities=11%  Similarity=0.130  Sum_probs=108.1

Q ss_pred             CCCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec-CcEEEEeeeCCCCCCCCCCCCCCCCce
Q 029305            6 ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY-GMGIHLLKSEEPDNLPKAGKNINPKDN   84 (195)
Q Consensus         6 ~~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~~ll~~~~~~~~~~~~~~~~~g~~   84 (195)
                      .+.|.+++|+||.|.|+|++++.+||+++|||++..+...   ...|..... +..+.+..            ....+..
T Consensus         2 ~~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~---~~~~~~~~~~~~~l~l~~------------~~~~~~~   66 (302)
T 2ehz_A            2 SKQAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGEK---DRFYLRMDYWHHRIVVHH------------NGQDDLE   66 (302)
T ss_dssp             --CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSCS---SEEEEESSSBSCSEEEES------------SCCSEEE
T ss_pred             CCcccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccCC---cceEEEeCCCceEEEEec------------CCCCCee
Confidence            3446789999999999999999999999999999875421   233312211 12233321            1124578


Q ss_pred             EEEEEeC---CHHHHHHHHHhCCCeEeccceecC--CcceEEEEEECCCCCEEEEEecCCC-CCCCCCCcchhhcccccc
Q 029305           85 HISFQCE---NMAIVERRLKEMKIDYVKSRVEEG--GINVDQLFFHDPDGSMIEICNCDVL-PVVPLAGDAVRIRSCTST  158 (195)
Q Consensus        85 Hiaf~v~---dl~~~~~~l~~~gv~~~~~~~~~~--~~~~~~~~~~DPdGn~iEi~~~~~~-~~~p~~~~~~~~~~~~~~  158 (195)
                      |++|.|+   |+++++++|+++|+++...+....  ..+.+.+||.|||||.|||++.... ..+|+....    ....+
T Consensus        67 ~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~----~~~~~  142 (302)
T 2ehz_A           67 YLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPRIDMSNPFHPGR----PLHGK  142 (302)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEECBCTTSCCCCSS----CCSSC
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECCCccCCCCccCCC----Ccccc
Confidence            9999995   799999999999999876553211  1235789999999999999986432 123322110    00011


Q ss_pred             cchhhhhhhhhhcCCCCCCCccccccccccccc
Q 029305          159 VNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFL  191 (195)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (195)
                      .+        ..+..|+|+.+.++|++++.+||
T Consensus       143 ~~--------~~~~~l~hv~l~v~D~~~a~~FY  167 (302)
T 2ehz_A          143 FV--------TGDQGLGHCIVRQTDVAEAHKFY  167 (302)
T ss_dssp             BC--------CGGGCSCEEEECCSCHHHHHHHH
T ss_pred             ee--------cCCCccceEEEEcCCHHHHHHHH
Confidence            11        23568999999999999999998

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.79  E-value=4.3e-19  Score=143.75  Aligned_cols=153  Identities=13%  Similarity=0.172  Sum_probs=105.3

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEee-cCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIR-RPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~-~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      |++++|+||.|.|+|++++++||+++|||++.. +.+    ...+.....+ ..+.+..  .          ...+..|+
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~l~l~~--~----------~~~~~~~~   64 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE----GALYLRMDDFPARLVVVP--G----------EHDRLLEA   64 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCS----SCEEEESSSSSCSEEEEE--C----------SSCEEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCC----CeEEEEeCCCcEEEEEec--C----------CCCCcceE
Confidence            457899999999999999999999999999986 432    2233121111 1232221  1          12467899


Q ss_pred             EEEeCC---HHHHHHHHHhCCCeEeccceec--CCcceEEEEEECCCCCEEEEEec-CCCCCCCCCCcchhhcccccccc
Q 029305           87 SFQCEN---MAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNC-DVLPVVPLAGDAVRIRSCTSTVN  160 (195)
Q Consensus        87 af~v~d---l~~~~~~l~~~gv~~~~~~~~~--~~~~~~~~~~~DPdGn~iEi~~~-~~~~~~p~~~~~~~~~~~~~~~~  160 (195)
                      +|.|++   +++++++|+++|+++...+...  ...+.+.+||.|||||.|||++. ......|+...      . ..+ 
T Consensus        65 ~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~------~-~~~-  136 (300)
T 2zyq_A           65 GWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHGTALEHRRVVSPY------G-HRF-  136 (300)
T ss_dssp             EEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEECCCCCCSCCCCTT------C-CCB-
T ss_pred             EEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEcCCcCCCCCccCC------C-ccc-
Confidence            999974   8899999999999987654321  11234799999999999999997 32222222110      0 001 


Q ss_pred             hhhhhhhhhhcCCCCCCCcccccccccccccc
Q 029305          161 CNFHQQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                             ...+.+|+|+.+.++|++++.+||.
T Consensus       137 -------~~~~~~l~hv~l~v~D~~~a~~FY~  161 (300)
T 2zyq_A          137 -------VTGEQGMGHVVLSTRDDAEALHFYR  161 (300)
T ss_dssp             -------CCGGGCSCEEEEECSCHHHHHHHHH
T ss_pred             -------ccCCCccCeEEEEeCCHHHHHHHHH
Confidence                   0235679999999999999999994

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.79  E-value=2.4e-18  Score=130.00  Aligned_cols=130  Identities=21%  Similarity=0.248  Sum_probs=90.4

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEee--------------------cCcEEEEeeeCC
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFN--------------------YGMGIHLLKSEE   68 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--------------------~g~~~~ll~~~~   68 (195)
                      +.+++|+|+.|.|+|++++.+||+++|||++..+....+....+..+.                    .+..++|++...
T Consensus        27 ~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~  106 (184)
T 2za0_A           27 TKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWG  106 (184)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCC
Confidence            357899999999999999999999999999886532100001111222                    235677776543


Q ss_pred             CCCCCCC----CCCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCC
Q 029305           69 PDNLPKA----GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL  140 (195)
Q Consensus        69 ~~~~~~~----~~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~  140 (195)
                      ....+..    ......+..|++|.|+|+++++++|+++|+++...+... . +.+.+||.|||||.|||++....
T Consensus       107 ~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~-~-~~~~~~~~DPdG~~iel~~~~~~  180 (184)
T 2za0_A          107 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDG-K-MKGLAFIQDPDGYWIEILNPNKI  180 (184)
T ss_dssp             GGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSS-S-STTCEEEECTTCCEEEEECTTTG
T ss_pred             CCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCC-C-ceeEEEEECCCCCEEEEEecCcc
Confidence            1111110    001225788999999999999999999999998766332 1 23578999999999999986543

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.78  E-value=1.4e-18  Score=143.44  Aligned_cols=161  Identities=15%  Similarity=0.149  Sum_probs=111.4

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCc-cEEEeec-----CcEEEEeeeCCCCCCCCCCCCCCCCc
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDG-ACRLFNY-----GMGIHLLKSEEPDNLPKAGKNINPKD   83 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~-~~~~~~~-----g~~~~ll~~~~~~~~~~~~~~~~~g~   83 (195)
                      ++++|+||.|.|+|++++++||+++|||++..+....+... .+..+..     +..+.+......  ... . ....+.
T Consensus        27 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~--~~~-~-~~~~~~  102 (338)
T 1zsw_A           27 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLV--GRT-Y-RGTNAI  102 (338)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTC--CBC-B-CCBSEE
T ss_pred             cCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCC--ccC-c-CCCCCe
Confidence            58899999999999999999999999999886542111111 2212332     244555543321  111 1 233568


Q ss_pred             eEEEEEeC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCC-C--CCCCCcchhhccccc
Q 029305           84 NHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLP-V--VPLAGDAVRIRSCTS  157 (195)
Q Consensus        84 ~Hiaf~v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~-~--~p~~~~~~~~~~~~~  157 (195)
                      .|++|.|+   |+++++++|+++|+++...+. ..  +.+.+||.|||||.|||++..... .  +|+..         .
T Consensus       103 ~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~-~~--G~~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~---------~  170 (338)
T 1zsw_A          103 TRIGLLVPSEDSLHYWKERFEKFDVKHSEMTT-YA--NRPALQFEDAEGLRLVLLVSNGEKVEHWETWEK---------S  170 (338)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHTTCEECCSEE-ET--TEEEEEEECTTCCEEEEEECTTCCCTTCCCCTT---------C
T ss_pred             eeEEEEcCCHHHHHHHHHHHHHCCCccccccc-cC--CcEEEEEECCCCCEEEEEEcCCccccccCcCcC---------C
Confidence            89999998   799999999999999886553 33  348999999999999999975431 1  22211         0


Q ss_pred             ccchhhhhhhhhhcCCCCCCCcccccccccccccc
Q 029305          158 TVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                      +..      .......|+|+.+.++|+.++.+||.
T Consensus       171 ~~~------~~~~~~~l~hv~l~v~Dl~~a~~FY~  199 (338)
T 1zsw_A          171 EVP------AKHQIQGMGSVELTVRRLDKMASTLT  199 (338)
T ss_dssp             SSC------GGGSCCEEEEEEEEESCHHHHHHHHH
T ss_pred             CCC------ccccCceEEEEEEEECCHHHHHHHHH
Confidence            010      12235679999999999999999994

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.78  E-value=3.4e-18  Score=119.77  Aligned_cols=113  Identities=17%  Similarity=0.270  Sum_probs=82.1

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEEEEEe
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   90 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v   90 (195)
                      ++|+|+.|.|+|++++.+||+++|||++....+     . +..+..+ ..+.+ . ... ..+..  .. ....|++|.|
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~-----~-~~~~~~~~~~l~l-~-~~~-~~~~~--~~-~~~~~~~~~v   71 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND-----G-FAQFTIGSHCLML-S-QNH-LVPLE--NF-QSGIIIHIEV   71 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET-----T-EEEEEETTEEEEE-E-SSC-SSSCC--CC-CSCEEEEEEC
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC-----C-EEEEEeCCeEEEE-E-cCC-CCCcc--cC-CCeEEEEEEE
Confidence            579999999999999999999999999876432     1 2234444 33433 2 211 11111  22 2335899999


Q ss_pred             CCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           91 ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        91 ~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +|+++++++|+++|+++..++... .++.+.+||.|||||.|||++.
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           72 EDVDQNYKRLNELGIKVLHGPTVT-DWGTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             SCHHHHHHHHHHHTCCEEEEEEEC-TTSCEEEEEECGGGCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCceecCCccc-cCccEEEEEECCCccEEEEEec
Confidence            999999999999999987766433 3455899999999999999874

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.78  E-value=1.7e-18  Score=126.53  Aligned_cols=118  Identities=16%  Similarity=0.197  Sum_probs=86.1

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      |.++++. +.|.|+|++++++||+++|||++..+.... ..+.. ....+ .++++......       ....+..|++|
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~-~~~~~-~~~~~-~~~l~~~~~~~-------~~~~~~~hl~f   71 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIP-QTGVE-LAQIS-TILLIAGSEEA-------LKPFRNTQATF   71 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCS-CSSCE-EEEET-TEEEEESCHHH-------HGGGGGCCEEE
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccC-CccEE-EEEec-cEEEecCCccc-------CCCCcceEEEE
Confidence            5678887 999999999999999999999988764311 11121 22223 25555433111       11124589999


Q ss_pred             EeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           89 QCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        89 ~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      .|+|+++++++|+++|+++..++.... ++ +.+||.|||||.|||++..+
T Consensus        72 ~V~d~d~~~~~l~~~G~~v~~~p~~~~-~G-~~~~~~DPdG~~iel~~~~~  120 (144)
T 3r6a_A           72 LVDSLDKFKTFLEENGAEIIRGPSKVP-TG-RNMTVRHSDGSVIEYVEHSK  120 (144)
T ss_dssp             EESCHHHHHHHHHHTTCEEEEEEEEET-TE-EEEEEECTTSCEEEEEEECC
T ss_pred             EeCCHHHHHHHHHHcCCEEecCCccCC-Cc-eEEEEECCCCCEEEEEEcCC
Confidence            999999999999999999987764432 23 78999999999999999754

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.78  E-value=4.5e-19  Score=145.57  Aligned_cols=152  Identities=13%  Similarity=0.097  Sum_probs=108.9

Q ss_pred             CcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC----cEEEEeeeCCCCCCCCCCCCCCCCc
Q 029305            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG----MGIHLLKSEEPDNLPKAGKNINPKD   83 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~~ll~~~~~~~~~~~~~~~~~g~   83 (195)
                      .+++++|+|+.|.|+|++++++||+++|||++..+.+    ...+ +...+    ..+.+...            ...+.
T Consensus        12 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~----~~~~-l~~~~~~~~~~l~l~~~------------~~~~~   74 (323)
T 1f1u_A           12 APDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTIY-LRSLEEFIHHNLVLRQG------------PIAAV   74 (323)
T ss_dssp             CCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SEEE-EECTTCCSSCSEEEEEC------------SSCEE
T ss_pred             CcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC----CEEE-EEecCCCCcEEEEEEEC------------CCCCe
Confidence            3678899999999999999999999999999987653    2233 22112    23433321            12367


Q ss_pred             eEEEEEe---CCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccc
Q 029305           84 NHISFQC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVN  160 (195)
Q Consensus        84 ~Hiaf~v---~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~  160 (195)
                      .|++|.|   +|++++.++|+++|+++...+......+.+.++|.|||||.|||++......+ .+          .+..
T Consensus        75 ~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~~~~~~-~~----------~~~~  143 (323)
T 1f1u_A           75 AAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHVER-LT----------QRYD  143 (323)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCC-CT----------TCGG
T ss_pred             eEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEecccccc-cc----------cccc
Confidence            8999999   58999999999999998876642222234789999999999999986543211 00          0010


Q ss_pred             hhhhhhhhhhcCCCCCCCccccccccccccc
Q 029305          161 CNFHQQQIQQEPQINPQSCLSDSIHAKEDFL  191 (195)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (195)
                      .    .....+.+|+|+++.++|++++.+||
T Consensus       144 ~----~~~~~~~~l~Hv~l~v~D~~~a~~FY  170 (323)
T 1f1u_A          144 L----YSAGELVRLDHFNQVTPDVPRGRAYL  170 (323)
T ss_dssp             G----CCTTCCCEEEEEEEEESCHHHHHHHH
T ss_pred             c----CCCCCCceeeeEEEecCCHHHHHHHH
Confidence            0    01235678999999999999999998

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.78  E-value=2.2e-18  Score=120.69  Aligned_cols=113  Identities=18%  Similarity=0.256  Sum_probs=82.2

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC--cEEEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g--~~~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      |.++++ |+.|.|+|++++.+||+++|||++....+     ... .+..+  ..+.+......        ....+..|+
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~~-----~~~-~~~~~~~~~~~l~l~~~~--------~~~~~~~~~   68 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMDHG-----WIV-THASPLEAHAQVSFAREG--------GSGTDVPDL   68 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS-----SEE-EEEEEEEEEEEEEEESSS--------BTTBCCCSE
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecCC-----EEE-EEecCCCCcEEEEEEcCC--------CCCCceeEE
Confidence            567889 99999999999999999999999987532     111 23222  12222222211        112346799


Q ss_pred             EEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           87 SFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        87 af~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +|.|+|+++++++|+++|+++..++... .++.+.+||.|||||.|||++.
T Consensus        69 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           69 SIEVDNFDEVHARILKAGLPIEYGPVTE-AWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             EEEESCHHHHHHHHHHTTCCCSEEEEEC-TTSCEEEEEECTTSCEEEEEEC
T ss_pred             EEEECCHHHHHHHHHHCCCccccCCccC-CCccEEEEEECCCCCEEEEEec
Confidence            9999999999999999999987765432 2345899999999999999974

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.77  E-value=6.3e-19  Score=142.54  Aligned_cols=153  Identities=15%  Similarity=0.156  Sum_probs=107.4

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      +++|+||.|.|+|++++.+||+++|||++..+.+    ...+  +..+ ..+.+....          ...++..|++|.
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~----~~~~--~~~~~~~~~l~~~~----------~~~~~~~~~~f~   65 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD----NGDL--FRIDSRAWRIAVQQ----------GEVDDLAFAGYE   65 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEE--EESSSBSCSEEEEE----------CTTCEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC----CeEE--EEeCCCcEEEEEec----------CCCCCccEEEEE
Confidence            5789999999999999999999999999987643    1233  3332 212222111          112467899999


Q ss_pred             eC---CHHHHHHHHHhCCCeEeccceec--CCcceEEEEEECCCCCEEEEEecCCCC-CCCCCCcchhhcccccccchhh
Q 029305           90 CE---NMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCDVLP-VVPLAGDAVRIRSCTSTVNCNF  163 (195)
Q Consensus        90 v~---dl~~~~~~l~~~gv~~~~~~~~~--~~~~~~~~~~~DPdGn~iEi~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~  163 (195)
                      |+   |+++++++|+++|+++...+...  ...+.+.+||.|||||.|||++..... .+|....    ... .++    
T Consensus        66 v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~----~~~-~~~----  136 (297)
T 1lgt_A           66 VADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVFEKPFLPG----AAV-SGF----  136 (297)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCS----SSC-SCB----
T ss_pred             eCCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECccccccCCccCC----Ccc-ccc----
Confidence            99   99999999999999987654321  112347999999999999999975432 2333211    001 111    


Q ss_pred             hhhhhhhcCCCCCCCcccccccccccccc
Q 029305          164 HQQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                          ...+..|+|+.+.++|++++.+||.
T Consensus       137 ----~~~~~~l~hv~l~v~D~~~a~~FY~  161 (297)
T 1lgt_A          137 ----LTGEQGLGHFVRCVPDSDKALAFYT  161 (297)
T ss_dssp             ----CCGGGCSCEEEEECSCHHHHHHHHH
T ss_pred             ----ccCccccceEEEecCCHHHHHHHHH
Confidence                1245789999999999999999994

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.77  E-value=7.2e-19  Score=141.89  Aligned_cols=153  Identities=12%  Similarity=0.154  Sum_probs=106.6

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      +++|+||.|.|+|++++++||+++|||++..+.+    ...+  +..+ ..+.+....          ....+..|++|.
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~----~~~~--l~~~~~~~~l~~~~----------~~~~~~~~~~f~   65 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG----DAAL--YRADQRAWRIAVQP----------GELDDLAYAGLE   65 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEE--EESSSBSCSEEEEE----------CTTCEEEEEEEE
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC----CeEE--EEcCCceEEEEEcc----------CCCCCccEEEEE
Confidence            6789999999999999999999999999987643    2233  2222 111121111          112467899999


Q ss_pred             eC---CHHHHHHHHHhCCCeEeccceec--CCcceEEEEEECCCCCEEEEEecCCCC-CCCCCCcchhhcccccccchhh
Q 029305           90 CE---NMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCDVLP-VVPLAGDAVRIRSCTSTVNCNF  163 (195)
Q Consensus        90 v~---dl~~~~~~l~~~gv~~~~~~~~~--~~~~~~~~~~~DPdGn~iEi~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~  163 (195)
                      |+   |+++++++|+++|+++...+...  ...+.+.+||.|||||.|||++..... .+|....    ... .+.    
T Consensus        66 v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~----~~~-~~~----  136 (292)
T 1kw3_B           66 VDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPAEIFHEPFLPS----APV-SGF----  136 (292)
T ss_dssp             CSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCS----SSC-CCB----
T ss_pred             ECCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECccccccCCCCCC----CCc-ccc----
Confidence            98   89999999999999987665321  112347899999999999999875432 2332111    000 111    


Q ss_pred             hhhhhhhcCCCCCCCcccccccccccccc
Q 029305          164 HQQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                          ......|+|+.+.++|++++.+||.
T Consensus       137 ----~~~~~~l~hv~l~v~D~~~a~~FY~  161 (292)
T 1kw3_B          137 ----VTGDQGIGHFVRCVPDTAKAMAFYT  161 (292)
T ss_dssp             ----CCGGGCSCEEEEECSCHHHHHHHHH
T ss_pred             ----ccCCcccceEEEecCCHHHHHHHHH
Confidence                1245689999999999999999994

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.77  E-value=7.5e-18  Score=122.81  Aligned_cols=115  Identities=18%  Similarity=0.299  Sum_probs=86.4

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec--CcEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY--GMGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      +++|+|+.|.|+|++++.+||+++|||++..+.+    ...  .+..  +..+.|+......  +. . ....+..|++|
T Consensus        23 m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~--~~~~~~~~~l~l~~~~~~~--~~-~-~~~~~~~hl~f   92 (144)
T 2kjz_A           23 MTHPDFTILYVDNPPASTQFYKALLGVDPVESSP----TFS--LFVLANGMKLGLWSRHTVE--PK-A-SVTGGGGELAF   92 (144)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET----TEE--EEECTTSCEEEEEETTSCS--SC-C-CCSSSSCEEEE
T ss_pred             cCceeEEEEEeCCHHHHHHHHHHccCCEeccCCC----CeE--EEEcCCCcEEEEEeCCCCC--Cc-c-CCCCCceEEEE
Confidence            3589999999999999999999999999877543    112  3333  4566666443211  11 1 23467899999


Q ss_pred             EeC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           89 QCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        89 ~v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      .|+   |+++++++|+++|+++..++.... ++ +.+||.|||||.|||++.
T Consensus        93 ~v~d~~dv~~~~~~l~~~G~~~~~~~~~~~-~g-~~~~~~DPdG~~iel~~~  142 (144)
T 2kjz_A           93 RVENDAQVDETFAGWKASGVAMLQQPAKME-FG-YTFTAADPDSHRLRVYAF  142 (144)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCCCSCCEEET-TE-EEEEECCTTCCEEEEEEE
T ss_pred             EeCCHHHHHHHHHHHHHCCCeEecCceecC-Cc-eEEEEECCCCCEEEEEec
Confidence            998   589999999999999877664432 33 889999999999999984

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.77  E-value=3.7e-18  Score=118.58  Aligned_cols=107  Identities=23%  Similarity=0.367  Sum_probs=80.5

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec--CcEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY--GMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      ++|+|+.|.|+|++++.+||+++|||++....+    . .+..+..  +..+.+.....   .      ..++..|++|.
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~----~-~~~~~~~~~~~~l~l~~~~~---~------~~~~~~~~~~~   67 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG----N-AFAVMRDNDGFILTLMKGKE---V------QYPKTFHVGFP   67 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET----T-TEEEEECTTCCEEEEEECSS---C------CCCTTCCEEEE
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC----C-cEEEEEcCCCcEEEEEeCCC---C------CCCceeEEEEE
Confidence            468999999999999999999999999986543    1 2223333  34566554321   1      12468899999


Q ss_pred             e---CCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           90 C---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        90 v---~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      |   +|+++++++|++.|+++.. +... +  .+.+||.|||||.|||+.
T Consensus        68 v~~~~d~~~~~~~l~~~G~~~~~-p~~~-~--~~~~~~~DPdG~~iel~~  113 (113)
T 1xqa_A           68 QESEEQVDKINQRLKEDGFLVEP-PKHA-H--AYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCCCC-CEEC----CEEEEEEETTTEEEEEEC
T ss_pred             cCCHHHHHHHHHHHHHCCCEEec-CcCC-C--cEEEEEECCCCcEEEEeC
Confidence            9   7899999999999999764 4322 2  489999999999999973

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.77  E-value=1.5e-18  Score=141.74  Aligned_cols=149  Identities=12%  Similarity=0.130  Sum_probs=109.8

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC----cEEEEeeeCCCCCCCCCCCCCCCCce
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG----MGIHLLKSEEPDNLPKAGKNINPKDN   84 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~~ll~~~~~~~~~~~~~~~~~g~~   84 (195)
                      +++++|+|+.|.|+|++++.+||+++|||++..+.+    ...+ +...+    ..+.+...            ...+..
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~----~~~~-l~~~~~~~~~~l~l~~~------------~~~~~~   66 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA----NNAW-FKAQGADEHHVVQLRRA------------DENRID   66 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS----SEEE-EECTTSCCSCSEEEEEC------------SSCEEE
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC----CeEE-EEECCCCCCEEEEEEEC------------CCCCee
Confidence            578999999999999999999999999999987653    2233 22222    33444321            124678


Q ss_pred             EEEEEe---CCHHHHHHHHHhCCCeEecccee-cCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccc
Q 029305           85 HISFQC---ENMAIVERRLKEMKIDYVKSRVE-EGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVN  160 (195)
Q Consensus        85 Hiaf~v---~dl~~~~~~l~~~gv~~~~~~~~-~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~  160 (195)
                      |++|.|   +|++++.++|+++|+++...+.. ....+.+.++|.|||||.|||++......++...             
T Consensus        67 ~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~-------------  133 (310)
T 3b59_A           67 VIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVAKGAKRDLA-------------  133 (310)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECCCCCCCCCCC-------------
T ss_pred             EEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEcccccCCCccC-------------
Confidence            999999   58999999999999998876643 1223458999999999999999975533222110             


Q ss_pred             hhhhhhhhhhcCCCCCCCcccccccccccccc
Q 029305          161 CNFHQQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                           .....+.+|.|+++.++|++++.+||.
T Consensus       134 -----~~~~~~~~l~hv~l~v~D~~~a~~FY~  160 (310)
T 3b59_A          134 -----RWEGVPVKISHIVLHSPNHQDMVKFFT  160 (310)
T ss_dssp             -----TTCCCCCEEEEEEEEETTHHHHHHHHH
T ss_pred             -----CCCCcCcEeceEEEecCCHHHHHHHHH
Confidence                 011245679999999999999999994

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.76  E-value=1.4e-17  Score=117.92  Aligned_cols=108  Identities=13%  Similarity=0.211  Sum_probs=82.3

Q ss_pred             ccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec-CcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeC
Q 029305           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY-GMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   91 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~   91 (195)
                      ...|+.|.|+|++++.+||+++|||++..+.+     + |..+.. +..+++......         ..++..|++|.|+
T Consensus         5 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~-----~-~~~~~~~~~~l~l~~~~~~---------~~~~~~~~~~~v~   69 (124)
T 1xrk_A            5 TSAVPVLTARDVAEAVEFWTDRLGFSRVFVED-----D-FAGVVRDDVTLFISAVQDQ---------VVPDNTQAWVWVR   69 (124)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEECS-----S-EEEEEETTEEEEEEECSCT---------TTGGGCEEEEEEE
T ss_pred             cceeEEEEcCCHHHHHHHHHHccCceEEecCC-----C-EEEEEECCEEEEEEcCCCC---------CCCCceEEEEEEC
Confidence            44699999999999999999999999987632     2 223443 445666543321         1133479999999


Q ss_pred             CHHHHHHHHHhC------CC--eEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           92 NMAIVERRLKEM------KI--DYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        92 dl~~~~~~l~~~------gv--~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      |+++++++|+++      |+  ++..++... .++ +.+||.|||||.|||++.
T Consensus        70 dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~-~~g-~~~~~~DPdG~~iel~~~  121 (124)
T 1xrk_A           70 GLDELYAEWSEVVSTNFRDASGPAMTEIVEQ-PWG-REFALRDPAGNCVHFVAE  121 (124)
T ss_dssp             CHHHHHHHHTTTSBSCTTTCSSCEECCCEEE-TTE-EEEEEECTTCCEEEEEEC
T ss_pred             CHHHHHHHHHHhcccccCCccccccCCceec-CCC-CEEEEECCCCCEEEEEEe
Confidence            999999999999      99  877766433 234 899999999999999985

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.76  E-value=2.5e-18  Score=124.02  Aligned_cols=121  Identities=17%  Similarity=0.237  Sum_probs=85.0

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEE-----eeeCCCCCCCCCCCCCCCCc
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHL-----LKSEEPDNLPKAGKNINPKD   83 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~l-----l~~~~~~~~~~~~~~~~~g~   83 (195)
                      +.+++++|+.|.|+|++++.+||+++|||++..+.+     . +..+..|..++.     +....... +... ....+.
T Consensus         4 ~~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~-----~-~~~~~~g~~l~~~~~~~~~~~~~~~-~~~~-~~~~~~   75 (141)
T 2qnt_A            4 FQGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG-----S-FVLFETGFAIHEGRSLEETIWRTSS-DAQE-AYGRRN   75 (141)
T ss_dssp             CCSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS-----S-EEEETTSCEEEEHHHHHHHHHSCCC---CC-CSCCSS
T ss_pred             ccccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC-----C-cEEEeccceeccCchhhhhccccCC-cccc-ccCCCc
Confidence            456789999999999999999999999999987543     1 223444433331     11000000 0000 234578


Q ss_pred             eEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           84 NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        84 ~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      .|++|.|+|+++++++|++ |+++..++... .++.+.+||.|||||.|||++...
T Consensus        76 ~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           76 MLLYFEHADVDAAFQDIAP-HVELIHPLERQ-AWGQRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             CEEEEEESCHHHHHC-CGG-GSCEEEEEEEC-TTSCEEEEEECTTCCEEEEEECC-
T ss_pred             eEEEEEeCcHHHHHHHHHc-CCccccCCccC-CCCCEEEEEECCCCCEEEEEecch
Confidence            8999999999999999999 99987766443 244589999999999999998654

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.76  E-value=2.3e-17  Score=119.20  Aligned_cols=121  Identities=20%  Similarity=0.195  Sum_probs=83.2

Q ss_pred             ccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec-CcEEEEeeeCC--CCCCCCCCCCCCCCceEEEEE
Q 029305           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY-GMGIHLLKSEE--PDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~~ll~~~~--~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      +|+|+.|.|+|++++.+||+++|||++..+...    ..+..+.. +..+.+.....  .-..+........+ .|++|.
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~~~f~   82 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRS----PIFRGLDTGKSCIGFNAHEAYELMQLAQFSETSGIK-FLLNFD   82 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCB----TTEEEEECSSSEEEEECTHHHHHTTCGGGCCCBSCC-EEEEEE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCC----CceEEeecCCEEEEEcCccccccccccccCCCCCCe-EEEEEE
Confidence            899999999999999999999999999765321    12223333 34444432100  00000000022234 599999


Q ss_pred             eC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           90 CE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        90 v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      |+   |+++++++|+++|+++..++... .++.+.+||.|||||.|||++...
T Consensus        83 v~~~~dv~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           83 VDTKEAVDKLVPVAIAAGATLIKAPYET-YYHWYQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             CSCHHHHHHHHHHHHHTTCEEEEEEEEC-TTSEEEEEEECTTSCEEEEEEEC-
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCcccc-CCccEEEEEECCCCCEEEEEEccc
Confidence            99   59999999999999988776433 345689999999999999998643

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.76  E-value=1.4e-17  Score=134.50  Aligned_cols=151  Identities=13%  Similarity=0.144  Sum_probs=105.0

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEE-EEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGI-HLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~-~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      ..+.|+.|.|+|++++++||+++||+++........ ...|..+..+ ... .+......  .+    ...+...+++|.
T Consensus        31 g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~-~~~~~~~~~~g~~~~~l~~~~~~--~~----~~~~~~~~~~~~  103 (282)
T 3oxh_A           31 GTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGG-GGVYSMATLNGEAVAAIAPMPPG--AP----EGMPPIWNTYIA  103 (282)
T ss_dssp             TSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEEEEETTEEEEEEEECCSC--C-------CCCEEEEEEE
T ss_pred             CCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCC-ccCEEEEEeCCeeeEeeccCCCC--CC----CCCCCcEEEEEE
Confidence            579999999999999999999999999887654210 0023234333 222 22222211  11    223456789999


Q ss_pred             eCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccchhhhhhhhh
Q 029305           90 CENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQ  169 (195)
Q Consensus        90 v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  169 (195)
                      |+|+++++++|+++|+++...+....+ ..+.++|.|||||.|||++......++..                      .
T Consensus       104 v~d~d~~~~~l~~~G~~~~~~p~~~~~-~g~~~~~~DP~G~~i~l~~~~~~~~~~~~----------------------~  160 (282)
T 3oxh_A          104 VDDVDAVVDKVVPGGGQVMMPAFDIGD-AGRMSFITDPTGAAVGLWQANRHIGATLV----------------------N  160 (282)
T ss_dssp             CSCHHHHHTTTTTTTCEEEEEEEEETT-TEEEEEEECTTCCEEEEEEESSCCSCSBC----------------------S
T ss_pred             eCCHHHHHHHHHHCCCEEEECCEecCC-CeEEEEEECCCCCEEEEEEccccCCcccc----------------------C
Confidence            999999999999999999877755433 34899999999999999997543222110                      0


Q ss_pred             hcCCCCCCCcccccccccccccc
Q 029305          170 QEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                      .+-++.|+.+.++|+.++.+||.
T Consensus       161 ~~~~~~~~~l~v~D~~~a~~FY~  183 (282)
T 3oxh_A          161 ETGTLIWNELLTDKPDLALAFYE  183 (282)
T ss_dssp             STTSEEEEEEECSCHHHHHHHHH
T ss_pred             CCCccEEEEEEcCCHHHHHHHHH
Confidence            13467889999999999999984

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.76  E-value=3.8e-17  Score=115.95  Aligned_cols=109  Identities=16%  Similarity=0.249  Sum_probs=81.6

Q ss_pred             ceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec-CcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCCH
Q 029305           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY-GMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENM   93 (195)
Q Consensus        15 ~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~dl   93 (195)
                      .++.|.|+|++++.+||++ |||++..+.+      .|..+.. +..+++......        ....+..|++|.|+|+
T Consensus         5 ~~~~l~v~D~~~a~~FY~~-LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~--------~~~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            5 ATPNLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEFFAHPGL--------DPLASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTEEEEEEECTTC--------CGGGCCCEEEEEESCH
T ss_pred             EEEEEEeCCHHHHHHHHHH-CCCEEEecCC------CEEEEEeCCEEEEEEeCCCC--------CCCCcceEEEEEECCH
Confidence            4899999999999999998 9999987632      2333443 445666543321        1124578999999999


Q ss_pred             HHHHHHHHhCCCeE-------eccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           94 AIVERRLKEMKIDY-------VKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        94 ~~~~~~l~~~gv~~-------~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ++++++|+++|+++       ..++. ...++.+.+||.|||||.|||++...
T Consensus        70 ~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~g~~~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           70 AEFYRQCKSVGIQETSSGYPRIHAPE-LQGWGGTMAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             HHHHHHHHHTTCCBCSSSSSEEEEEE-ECTTSSEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHCCCccccccCccccCCc-ccCcccEEEEEECCCCCEEEEecchh
Confidence            99999999999984       44443 23345589999999999999998644

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.75  E-value=1.5e-17  Score=117.45  Aligned_cols=111  Identities=12%  Similarity=0.134  Sum_probs=82.3

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEee-cCcEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFN-YGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      |.++.+ ++.|.|+|++++.+||+++|||++..+.+     . |..+. .+..+++......   +      .++..|++
T Consensus         2 ~~~~~~-~~~l~v~D~~~a~~FY~~~LG~~~~~~~~-----~-~~~~~~~~~~l~l~~~~~~---~------~~~~~~~~   65 (122)
T 1qto_A            2 VKFLGA-VPVLTAVDVPANVSFWVDTLGFEKDFGDR-----D-FAGVRRGDIRLHISRTEHQ---I------VADNTSAW   65 (122)
T ss_dssp             CCCCCC-CCEEEESSHHHHHHHHHHTTCCEEEEECS-----S-EEEEEETTEEEEEEECSCH---H------HHTTCEEE
T ss_pred             Ccccce-eEEEEcCCHHHHHHHHHhccCcEEeeCCC-----C-EEEEEECCEEEEEEcCCCC---C------CCCceEEE
Confidence            334444 79999999999999999999999987632     2 22343 3455666543211   1      12347999


Q ss_pred             EEeCCHHHHHHHHHhC------CC--eEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           88 FQCENMAIVERRLKEM------KI--DYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        88 f~v~dl~~~~~~l~~~------gv--~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      |.|+|+++++++|+++      |+  ++..++... .++ +.++|.|||||.|||++.
T Consensus        66 ~~v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~-~~g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           66 IEVTDPDALHEEWARAVSTDYADTSGPAMTPVGES-PAG-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             EEESCHHHHHHHHTTTSCSCTTCTTSCEECCCEEE-TTE-EEEEEECTTSCEEEEEEC
T ss_pred             EEECCHHHHHHHHHhhccccccCccccccCCCcCC-CCC-cEEEEECCCCCEEEEecC
Confidence            9999999999999999      99  777666433 345 899999999999999974

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.75  E-value=2.3e-18  Score=139.86  Aligned_cols=161  Identities=14%  Similarity=0.144  Sum_probs=108.3

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      ++++|+||.|.|+|++++.+||+++|||++..+...   ...+.....+ ..+.+.....          ..++..|++|
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~~~~l~~~~~~~~~~l~~~~~----------~~~~~~~~~f   70 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ---GRVYLKAWTEVDKFSLVLREA----------DEPGMDFMGF   70 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT---SCEEEECTTCCBSCSEEEEEC----------SSCEEEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC---CcEEEEecCCCCceEEEEccC----------CCCCcceEEE
Confidence            468999999999999999999999999999876531   2233122111 2223322221          1246889999


Q ss_pred             Ee---CCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCC-CCCCcchhhcccccccchhhh
Q 029305           89 QC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVV-PLAGDAVRIRSCTSTVNCNFH  164 (195)
Q Consensus        89 ~v---~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~  164 (195)
                      .|   +|+++++++|+++|+++...+......+.+.+||.|||||.|||++......+ ....   +  +. ......  
T Consensus        71 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~---~--~~-~~~~~~--  142 (307)
T 1mpy_A           71 KVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEYTGKWGLND---V--NP-EAWPRD--  142 (307)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCSTTCCS---B--SC-CSSCSC--
T ss_pred             EeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcchhcccccccc---c--CC-cCCccc--
Confidence            99   69999999999999998776531212234789999999999999986543221 1100   0  00 000000  


Q ss_pred             hhhhhhcCCCCCCCcccccccccccccc
Q 029305          165 QQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                       .......+|+|+.+.++|++++.+||.
T Consensus       143 -~~~~~~~~i~hv~l~v~D~~~a~~FY~  169 (307)
T 1mpy_A          143 -LKGMAAVRFDHALMYGDELPATYDLFT  169 (307)
T ss_dssp             -CCTTCCCEEEEEEEEESCHHHHHHHHH
T ss_pred             -CCCCCcCceeeEEEEcCCHHHHHHHHH
Confidence             011246679999999999999999995

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.74  E-value=1.2e-16  Score=114.77  Aligned_cols=119  Identities=13%  Similarity=0.126  Sum_probs=83.7

Q ss_pred             ceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec-CcEEEEeeeCCCCCCCCCCCCCCCCce-EEEEEeCC
Q 029305           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY-GMGIHLLKSEEPDNLPKAGKNINPKDN-HISFQCEN   92 (195)
Q Consensus        15 ~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~~ll~~~~~~~~~~~~~~~~~g~~-Hiaf~v~d   92 (195)
                      -.+.|.|+|++++++||+++|||++..+.... ....+..+.. +..+.+.........   . ....... |++|.|+|
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~~~l~l~~~~~~~~~---~-~~~~~~~~~~~~~v~d   78 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGGGIVMVRRTGEPYTV---S-CAGGHTCKQVIVWVSD   78 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSSSEEEEEETTCCSSC---E-ECCCCCCCEEEEEESC
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCCeEEEEEecCCCcCc---c-CCCCCcEEEEEEEeCC
Confidence            36899999999999999999999998754311 1122334443 345555443211111   1 1222334 99999999


Q ss_pred             HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           93 MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        93 l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +++++++|+++|+++..++... .++.+.+||.|||||.|||++..+
T Consensus        79 v~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           79 VDEHFMRSTAAGADIVQPLQDK-PWGLRQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEE-TTTEEEEEEECSSSCEEEEEECC-
T ss_pred             HHHHHHHHHHcCCeeccCcccc-CCCcEEEEEECCCCCEEEEEEEcC
Confidence            9999999999999988766433 345689999999999999999643

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.74  E-value=6e-17  Score=116.29  Aligned_cols=117  Identities=16%  Similarity=0.170  Sum_probs=80.5

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEe
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   90 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v   90 (195)
                      +..+ +..|.|+|++++++||+++|||++..+.+.    .++ +...+..+++.........     ....+..|++|.|
T Consensus         6 ~~~~-~~~l~v~D~~~a~~FY~~~LG~~~~~~~~~----~~~-l~~~~~~l~l~~~~~~~~~-----~~~~~~~~l~~~v   74 (134)
T 3fcd_A            6 IHQI-TPFLHIPDMQEALTLFCDTLGFELKYRHSN----YAY-LELSGCGLRLLEEPARKII-----PDGIARVAICIDV   74 (134)
T ss_dssp             CCEE-EEEEEESCHHHHHHHHTTTTCCEEEEEETT----EEE-EEETTEEEEEEECCCC--------------EEEEEEC
T ss_pred             hhcc-eeEEEECCHHHHHHHHHhccCcEEEEeCCC----eEE-EEECCEEEEEEeCCCCCcC-----CCCCceEEEEEEe
Confidence            3444 678999999999999999999999876431    222 2233456666655432111     1123457999999


Q ss_pred             CCHHHHHHHHHhCCC----eEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           91 ENMAIVERRLKEMKI----DYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        91 ~dl~~~~~~l~~~gv----~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +|+++++++|+++|+    ++..++. ...++.+.++|.|||||.|||++...
T Consensus        75 ~dv~~~~~~l~~~g~~~g~~i~~~~~-~~~~g~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           75 SDIDSLHTKLSPALENLPADQVEPLK-NMPYGQREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             SCHHHHHHHHHHHHTTSCGGGEEEEE-ECTTSEEEEEEECTTSCEEEEEEECC
T ss_pred             CCHHHHHHHHHhcCCccCCccccCCc-ccCCCcEEEEEECCCCCEEEEEEccc
Confidence            999999999996554    4444442 33446689999999999999999755

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.73  E-value=3.4e-17  Score=118.03  Aligned_cols=125  Identities=20%  Similarity=0.266  Sum_probs=81.9

Q ss_pred             CCCCCCCCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCC-CCCCccEEEeecC---cEEEEeeeCCCCCCCCCC
Q 029305            1 MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS-FDFDGACRLFNYG---MGIHLLKSEEPDNLPKAG   76 (195)
Q Consensus         1 m~~~~~~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~g---~~~~ll~~~~~~~~~~~~   76 (195)
                      |+.+=++ |. ..+-||.|.|+|++++++||+++|||++..+... ..+...  .+..+   ..+++.......  +.  
T Consensus         1 ~~~~~~~-m~-~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~--~~~~~~~~~~l~l~~~~~~~--~~--   72 (139)
T 1twu_A            1 MGKRFSS-FQ-AAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGV--MFGLPHADYHLEFTQYEGGS--TA--   72 (139)
T ss_dssp             --CBCSS-CB-CSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEETTEEEE--EEESSSSSEEEEEEEETTCC--CC--
T ss_pred             CCCcCCC-CC-cceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccCCCCeeEE--EEecCCCceEEEEeecCCCC--CC--
Confidence            4444333 33 3456899999999999999999999998765321 111112  33332   235555443221  11  


Q ss_pred             CCCCCCceEEEEEeCCH---HHHHHHHHhCCCeEeccceec-CCcceEEEEEECCCCCEEEEEec
Q 029305           77 KNINPKDNHISFQCENM---AIVERRLKEMKIDYVKSRVEE-GGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        77 ~~~~~g~~Hiaf~v~dl---~~~~~~l~~~gv~~~~~~~~~-~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                       ....+..|++|.|+|+   ++++++|+++|+++.....+. ...+   .||+|||||.|||++.
T Consensus        73 -~~~~~~~hi~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g---~~~~DPdG~~iel~~~  133 (139)
T 1twu_A           73 -PVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG---VTIEDPDGWRIVFMNS  133 (139)
T ss_dssp             -CCCCTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE---EEEECTTCCEEEEESS
T ss_pred             -CCCCCccEEEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC---eEEECCCCCEEEEEEc
Confidence             3345678999999999   999999999999987322111 1112   3799999999999984

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.73  E-value=1.1e-16  Score=132.28  Aligned_cols=118  Identities=13%  Similarity=0.212  Sum_probs=87.8

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec---CcEEEEeeeCCCCCCCCCCCCCCCCceE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY---GMGIHLLKSEEPDNLPKAGKNINPKDNH   85 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~---g~~~~ll~~~~~~~~~~~~~~~~~g~~H   85 (195)
                      +.+.+|+||+|.|+|++++.+||+++|||++..+.+.     .. .+..   +..++++.....   +... ...++++|
T Consensus       149 ~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~~-----~~-~~~~g~~~~~l~l~~~~~~---~~~~-~g~g~~~H  218 (335)
T 3oaj_A          149 VAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEGD-----FV-RYRSAGDIGNVIDLKLTPI---GRGQ-MGAGTVHH  218 (335)
T ss_dssp             TSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEETT-----EE-EEECSSSSSCEEEEESSCC---CBCB-CSBTEEEE
T ss_pred             hhhccccceEEEECCHHHHHHHHHHHhCCEEeeccCC-----EE-EEEeCCCCcEEEEEeCCCC---CcCC-CCCcceEE
Confidence            4689999999999999999999999999999876431     22 2322   245777654321   1111 33456899


Q ss_pred             EEEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           86 ISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        86 iaf~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +||.|+|   ++++.++|+++|+++.... ...  +.+++||+|||||.|||+++.+
T Consensus       219 iAf~v~d~~~l~~~~~~L~~~G~~~~~~~-~r~--~~~siYfrDP~G~~iEl~td~p  272 (335)
T 3oaj_A          219 IAWRANDDEDQLDWQRYIASHGYGVTPVR-DRN--YFNAIYFREHGEILFEIATDPP  272 (335)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCCCCCE-ECS--SSEEEEEECTTSCEEEEEESCS
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCCccccc-cCC--cEEEEEEECCCCcEEEEEeCCC
Confidence            9999997   6778999999999865433 222  3479999999999999999744

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.73  E-value=1.5e-17  Score=137.09  Aligned_cols=141  Identities=12%  Similarity=0.189  Sum_probs=100.2

Q ss_pred             CcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCC---------CCccEE--EeecC-----cEEEEeeeCCCCC
Q 029305            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD---------FDGACR--LFNYG-----MGIHLLKSEEPDN   71 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~---------~~~~~~--~~~~g-----~~~~ll~~~~~~~   71 (195)
                      .|++++|+||.|.|+|++++++||+++|||++..+....+         +++.|.  ++..+     ..++|....... 
T Consensus        22 ~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~-  100 (330)
T 3zi1_A           22 SMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG-  100 (330)
T ss_dssp             GCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC-
T ss_pred             ecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC-
Confidence            3567899999999999999999999999999876543110         122221  22222     346665533221 


Q ss_pred             CCCCCCCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchh
Q 029305           72 LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVR  151 (195)
Q Consensus        72 ~~~~~~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~  151 (195)
                       .   .....|+.|+||.|+|+   .++++++|+++...+   .    ..+||.|||||.|||++...    +       
T Consensus       101 -~---~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~---~----~~~~~~DPdG~~iel~~~~~----~-------  155 (330)
T 3zi1_A          101 -D---YKLGNDFMGITLASSQA---VSNARKLEWPLTEVA---E----GVFETEAPGGYKFYLQNRSL----P-------  155 (330)
T ss_dssp             -C---CCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEE---T----TEEEEECTTSCEEEEESSCC----T-------
T ss_pred             -c---cccCCCeeEEEEECchH---HHHHHHcCCceeccC---C----ceEEEECCCCCEEEEEecCC----C-------
Confidence             1   13455899999999987   677888999987654   2    28899999999999999642    0       


Q ss_pred             hcccccccchhhhhhhhhhcCCCCCCCcccccccccccccc
Q 029305          152 IRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                                        .+..|.|+.+.+.|++++.+||.
T Consensus       156 ------------------~~~~i~hv~L~v~Dl~~a~~FY~  178 (330)
T 3zi1_A          156 ------------------QSDPVLKVTLAVSDLQKSLNYWC  178 (330)
T ss_dssp             ------------------TSCSEEEEEEEESCHHHHHHHHH
T ss_pred             ------------------CCCceeEEEEECCCHHHHHHHHH
Confidence                              01225699999999999999984

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.71  E-value=2.4e-16  Score=129.91  Aligned_cols=145  Identities=12%  Similarity=0.198  Sum_probs=98.9

Q ss_pred             CcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEee-cCc--EEEEeeeCCCCCCCCCCCCCCCCce
Q 029305            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFN-YGM--GIHLLKSEEPDNLPKAGKNINPKDN   84 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~g~--~~~ll~~~~~~~~~~~~~~~~~g~~   84 (195)
                      .+.+.+|+||.|.|+|++++.+||+++|||++..+.+.   ...| ... .+.  .++.+.. ..   +... ....+..
T Consensus       175 ~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~---~~~~-~~~~~g~~~~~~~~~~-~~---~~~~-~~~~~~~  245 (338)
T 1zsw_A          175 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ---EAIF-QSIKGEAFGEIVVKYL-DG---PTEK-PGRGSIH  245 (338)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS---EEEE-ESSTTCSTTCEEEEEC-CS---SBCB-CCBTCEE
T ss_pred             cccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecCC---eEEE-EecCCCCceEEEEecc-CC---CCCC-CCCCceE
Confidence            35688999999999999999999999999999876541   1122 221 122  3444433 11   1111 2235678


Q ss_pred             EEEEEeC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccch
Q 029305           85 HISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNC  161 (195)
Q Consensus        85 Hiaf~v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~~  161 (195)
                      |++|.|+   |+++++++|+++|+++. ++...+  +.+.+||.|||||.|||++..+  .+...+++...  . +++++
T Consensus       246 hiaf~v~~~~dv~~~~~~l~~~G~~~~-~~~~~~--~~~~~~~~DPdG~~iEl~~~~~--~~~~d~~~~~~--~-~~l~~  317 (338)
T 1zsw_A          246 HLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRF--YFKSLYFRESNGILFEIATDGP--GFTVDGDVEHL--G-EKLDL  317 (338)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCCC-CCEECS--SEEEEEEECTTCCEEEEEEEEE--CTTTTSCGGGT--T-SSBCC
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCcee-eeeecC--ceEEEEEECCCCCEEEEEEcCC--CccccCCcccc--C-CccCC
Confidence            9999999   79999999999999985 443332  4588999999999999998653  23343433222  3 77877


Q ss_pred             hhhhhhhh
Q 029305          162 NFHQQQIQ  169 (195)
Q Consensus       162 ~~~~~~~~  169 (195)
                      ....++.+
T Consensus       318 ~~~~~~~~  325 (338)
T 1zsw_A          318 PPFLEDQR  325 (338)
T ss_dssp             CGGGGGGH
T ss_pred             cHHHHHHH
Confidence            66655533

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.71  E-value=3e-16  Score=113.89  Aligned_cols=119  Identities=14%  Similarity=0.185  Sum_probs=79.5

Q ss_pred             eEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEee-cCcEEEEeeeCCCCC-CC--CCCCCCCCCceEEEEEeC
Q 029305           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFN-YGMGIHLLKSEEPDN-LP--KAGKNINPKDNHISFQCE   91 (195)
Q Consensus        16 hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~g~~~~ll~~~~~~~-~~--~~~~~~~~g~~Hiaf~v~   91 (195)
                      .+.|.|+|++++.+||+++|||++..+...    ..+..+. .+..+.|........ ..  ........+. +++|.|+
T Consensus         8 ~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~----~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~-~~~~~v~   82 (145)
T 2rk9_A            8 VPELYCFDINVSQSFFVDVLGFEVKYERPD----EEFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPLGSGV-NFQWDVI   82 (145)
T ss_dssp             EEEEEESSHHHHHHHHHHTTCCEEEEEEGG----GTEEEEEETTEEEEEEEC-----------CCSSTTTTE-EEEEECS
T ss_pred             eEEEEECCHHHHHHHHHhccCCEEEeecCC----CCEEEEEcCCeEEEEEeccCCCcccccCccccCCCCce-EEEEEEC
Confidence            689999999999999999999999753211    1222343 344566655421111 00  0011222344 4999999


Q ss_pred             CHHHHHHHHHh-CCCeEeccceec------CCcceEEEEEECCCCCEEEEEecCC
Q 029305           92 NMAIVERRLKE-MKIDYVKSRVEE------GGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        92 dl~~~~~~l~~-~gv~~~~~~~~~------~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      |+++++++|++ +|+++...+...      ..++.+.+||.|||||.|||++...
T Consensus        83 dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~  137 (145)
T 2rk9_A           83 DIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIH  137 (145)
T ss_dssp             CHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC--
T ss_pred             CHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCC
Confidence            99999999999 999988766420      2335688999999999999998643

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.68  E-value=7.2e-16  Score=125.36  Aligned_cols=117  Identities=19%  Similarity=0.211  Sum_probs=82.7

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCC---CCccEEEeecCcE---EEEeeeCCCCCCCCCCCCCCCC
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD---FDGACRLFNYGMG---IHLLKSEEPDNLPKAGKNINPK   82 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~---~~~~~~~~~~g~~---~~ll~~~~~~~~~~~~~~~~~g   82 (195)
                      +.+.+|+||.|.|+|++++.+||+++|||++..+....+   ....|  +..+..   +.+...           ...++
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~~  213 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIW--LSCSHKVHDIAFVEY-----------PEKGK  213 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEE--EESSSSSCSEEEEEC-----------SSTTE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEE--EecCCCceeEEEecC-----------CCCCc
Confidence            467899999999999999999999999999876532111   11222  222211   222211           12345


Q ss_pred             ceEEEEEeCCHHH---HHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           83 DNHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        83 ~~Hiaf~v~dl~~---~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      +.|+||.|+|+++   ++++|+++|+++...+......+...+||+|||||.|||+...
T Consensus       214 ~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          214 LHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             EEEEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             eeEEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            8999999997665   6689999999987666443322457899999999999999873

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.68  E-value=4.4e-16  Score=113.51  Aligned_cols=119  Identities=13%  Similarity=0.156  Sum_probs=77.9

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEee--cCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCC-----CCCC
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIR--RPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKN-----INPK   82 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~--~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~-----~~~g   82 (195)
                      .+.+++|+.|.|+|++++.+||+++|||++..  ... .  ...+  +  |..+++ ....+...+.....     ..+.
T Consensus        18 ~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-~--~~~~--~--g~~l~l-~~~~~~~~~~~~~~~~~~~g~~~   89 (148)
T 3bt3_A           18 YVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDD-E--GFGD--Y--GCVFDY-PSEVAVAHLTPFRGFHLFKGEPI   89 (148)
T ss_dssp             CEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECT-T--SCEE--E--EEEESS-CTTTTSCC--CCCSEEEEESCCC
T ss_pred             ceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecC-C--CccE--E--ccEEEE-eccCCCcccccccccceeeccCC
Confidence            35789999999999999999999999999953  211 1  2233  3  323222 01111111100000     0011


Q ss_pred             ceEEEE-EeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           83 DNHISF-QCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        83 ~~Hiaf-~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      ..+.+| .|+|+++++++|+++|+++..++... .++.+.+||.|||||.|||++.
T Consensus        90 ~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~  144 (148)
T 3bt3_A           90 KGVAGFMMIEGIDALHKYVKENGWDQISDIYTQ-PWGARECSITTTDGCILRFFES  144 (148)
T ss_dssp             SSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEE-TTTEEEEEEECTTSCEEEEEEE
T ss_pred             CccEEEEEcCCHHHHHHHHHHcCCccccCcccC-CCccEEEEEECCCCCEEEEeee
Confidence            122255 89999999999999999987766433 2456889999999999999984

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.68  E-value=3.7e-16  Score=129.13  Aligned_cols=120  Identities=18%  Similarity=0.225  Sum_probs=86.9

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCC-CCCccEEEeecC---cEEEEeeeCCCCCCCCCCCCCCCCce
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF-DFDGACRLFNYG---MGIHLLKSEEPDNLPKAGKNINPKDN   84 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~g---~~~~ll~~~~~~~~~~~~~~~~~g~~   84 (195)
                      +.+.+|+||.|.|+|++++.+||+++|||++..+.... .....|  +..+   ..+.+.....         ...+++.
T Consensus       149 ~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~~~g~~~~~~--l~~~~~~~~l~~~~~~~---------~~~~~~~  217 (339)
T 3lm4_A          149 IPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVVDGNVEIGAW--MSSNLLGHEVACMRDMT---------GGHGKLH  217 (339)
T ss_dssp             SCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEEETTEEEEEE--EESSSSSCSEEEEECTT---------SCCSEEE
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEecCCcEEEEE--EEeCCCceEEEEeccCC---------CCCCcee
Confidence            46889999999999999999999999999988763200 001222  2322   2344443110         2335689


Q ss_pred             EEEEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           85 HISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        85 Hiaf~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      |++|.|+|   ++++.++|+++|+++...+..........+||+|||||.|||+.+..
T Consensus       218 Hiaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~  275 (339)
T 3lm4_A          218 HLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAG  275 (339)
T ss_dssp             EEEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCC
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCC
Confidence            99999998   88888999999999987664433334578999999999999986543

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.66  E-value=5.2e-16  Score=126.62  Aligned_cols=113  Identities=21%  Similarity=0.211  Sum_probs=83.8

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC---cEEEEeeeCCCCCCCCCCCCCCCCceE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG---MGIHLLKSEEPDNLPKAGKNINPKDNH   85 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g---~~~~ll~~~~~~~~~~~~~~~~~g~~H   85 (195)
                      ..+.+|+||.|.|+|++++.+||+++|||++..+.+.   ...|  +..+   ..+.+...           .  .|..|
T Consensus       137 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~---~~~f--l~~~~~~~~l~l~~~-----------~--~g~~h  198 (310)
T 3b59_A          137 GVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLGD---FMCF--LRCNSAHHRIAILPG-----------P--PCLNH  198 (310)
T ss_dssp             CCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEETT---TEEE--EESSSBSCSEEEEES-----------S--SEEEE
T ss_pred             CcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeCC---eEEE--EecCCCcceEEEECC-----------C--CceEE
Confidence            4678999999999999999999999999999865321   2233  2222   12322210           2  46899


Q ss_pred             EEEEeCCHHHH---HHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           86 ISFQCENMAIV---ERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        86 iaf~v~dl~~~---~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ++|.|+|++++   +++|+++|+++...+..........+||.|||||.||+++...
T Consensus       199 i~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  255 (310)
T 3b59_A          199 VAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELE  255 (310)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCcc
Confidence            99999997777   9999999999876654322123478999999999999998643

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.64  E-value=1.5e-15  Score=124.51  Aligned_cols=117  Identities=21%  Similarity=0.236  Sum_probs=82.3

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCc---EEEEeeeCCCCCCCCCCCCCCCCceE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGM---GIHLLKSEEPDNLPKAGKNINPKDNH   85 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~---~~~ll~~~~~~~~~~~~~~~~~g~~H   85 (195)
                      +.+.+|+|+.|.|+|++++.+|| ++|||++.......+......++..+.   .+.+..            ...+++.|
T Consensus       148 ~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~~------------~~~~~~~H  214 (323)
T 1f1u_A          148 GELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTG------------GNGPRMHH  214 (323)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEE------------SSBSEEEE
T ss_pred             CCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEeC------------CCCCCceE
Confidence            56789999999999999999999 999999876432110000111222221   122221            11237899


Q ss_pred             EEEEeCCHHH---HHHHHHhCCC--eEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           86 ISFQCENMAI---VERRLKEMKI--DYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        86 iaf~v~dl~~---~~~~l~~~gv--~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      ++|.|+|+++   ++++|+++|+  ++...+......+...+||+|||||.||++...
T Consensus       215 iaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          215 VAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            9999999888   9999999999  887655333333446799999999999999753

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.64  E-value=2.1e-15  Score=121.98  Aligned_cols=118  Identities=19%  Similarity=0.199  Sum_probs=81.7

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCC------CCc---cEEEeecC---cEEEEeeeCCCCCCCCCCC
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD------FDG---ACRLFNYG---MGIHLLKSEEPDNLPKAGK   77 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~------~~~---~~~~~~~g---~~~~ll~~~~~~~~~~~~~   77 (195)
                      .+.+|+||.|.|+|++++++||+++|||++........      .++   ...++..+   ..+.+...           
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------  207 (300)
T 2zyq_A          139 GEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPM-----------  207 (300)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEESS-----------
T ss_pred             CCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEecC-----------
Confidence            46789999999999999999999999999865321000      001   11122222   12333311           


Q ss_pred             CCCCCceEEEEEeCCHHH---HHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           78 NINPKDNHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        78 ~~~~g~~Hiaf~v~dl~~---~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      ....+..|++|.|+|+++   ++++|+++|+++...+........+.+||+|||||.|||++..
T Consensus       208 ~~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          208 PTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             CCSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             CCCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            123567999999998665   5999999999988765333222357899999999999999864

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.64  E-value=1.5e-15  Score=127.50  Aligned_cols=176  Identities=10%  Similarity=0.072  Sum_probs=114.4

Q ss_pred             CCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCC----CCCCCccEEEeecC-cEEEEeeeCCCCCC----CCCC-
Q 029305            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPG----SFDFDGACRLFNYG-MGIHLLKSEEPDNL----PKAG-   76 (195)
Q Consensus         7 ~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~g-~~~~ll~~~~~~~~----~~~~-   76 (195)
                      ++|.+++|+||.+.|.|++++.+||+++|||++..+.+    +... ..+ .+..| ..+.+.....+...    .... 
T Consensus        16 ~~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~-~~~-~~~~g~~~l~l~~~~~~~~~~~~~~~~~~   93 (381)
T 1t47_A           16 DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRET-ASY-VLTNGSARFVLTSVIKPATPWGHFLADHV   93 (381)
T ss_dssp             CCSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSE-EEE-EEEETTEEEEEEEESSCCSHHHHHHHHHH
T ss_pred             CCCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceE-EEE-EEecCCEEEEEecCCCCCCcchhHHHHHH
Confidence            56789999999999999999999999999999987521    1111 122 34444 45655543222111    0000 


Q ss_pred             CCCCCCceEEEEEeCCHHHHHHHHHhCCCeEecccee--cCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcc
Q 029305           77 KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE--EGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRS  154 (195)
Q Consensus        77 ~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~--~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~  154 (195)
                      ...+.+..|+||.|+|+++++++|+++|+++...+..  ........+.+.||+|+.++|++.......-.+....    
T Consensus        94 ~~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~~~~f~p~~~~----  169 (381)
T 1t47_A           94 AEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVA----  169 (381)
T ss_dssp             HHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSSSSTTCEE----
T ss_pred             HhcCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCCCCCCCCCCcc----
Confidence            0124689999999999999999999999999877643  1222346789999999999999854211100000000    


Q ss_pred             cccccchhhhhhhhhhcCCCCCCCcccc--cccccccccc
Q 029305          155 CTSTVNCNFHQQQIQQEPQINPQSCLSD--SIHAKEDFLH  192 (195)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  192 (195)
                      . ....  .. .....-..|.|++..++  |+.++.+||.
T Consensus       170 ~-~~~~--~~-~~~~~~~~idHv~l~V~~~dl~~a~~FY~  205 (381)
T 1t47_A          170 A-APIV--EP-PAHRTFQAIDHCVGNVELGRMNEWVGFYN  205 (381)
T ss_dssp             C-CCSS--CC-CSSCSCCEEEEEEEECCTTCHHHHHHHHH
T ss_pred             c-cccc--cC-CCCCCceEEeEEEEeeccccHHHHHHHHH
Confidence            0 0000  00 01112457899999999  9999999984

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.63  E-value=1.9e-15  Score=122.60  Aligned_cols=118  Identities=15%  Similarity=0.277  Sum_probs=82.8

Q ss_pred             CcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCc-cEE-EeecC---cEEEEeeeCCCCCCCCCCCCCCCC
Q 029305            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDG-ACR-LFNYG---MGIHLLKSEEPDNLPKAGKNINPK   82 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~-~~~-~~~~g---~~~~ll~~~~~~~~~~~~~~~~~g   82 (195)
                      .+.+++|+||.|.|+|++++.+||+++|||++..+....  .+ .+. .+..+   ..+.+...            ...|
T Consensus       145 ~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~------------~~~g  210 (307)
T 1mpy_A          145 GMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDE--NGTRVAQFLSLSTKAHDVAFIHH------------PEKG  210 (307)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECT--TCCEEEEEEESSSBSCSEEEEEC------------SSSS
T ss_pred             CCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecC--CCcEEEEEEEcCCCceeEEEecC------------CCCC
Confidence            357889999999999999999999999999987653210  11 110 12221   22333211            1124


Q ss_pred             -ceEEEEEeC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           83 -DNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        83 -~~Hiaf~v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                       ..|++|.|+   ++++++++|+++|+++...+...+....+.+||+|||||.|||++...
T Consensus       211 ~~~hi~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  271 (307)
T 1mpy_A          211 RLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  271 (307)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             cceEEEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEeccc
Confidence             799999999   566777999999999876664432112478999999999999999643

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.61  E-value=7.6e-15  Score=118.48  Aligned_cols=116  Identities=13%  Similarity=0.143  Sum_probs=81.8

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCC-----CCCCccEEEeecC---cEEEEeeeCCCCCCCCCCCCCCC
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS-----FDFDGACRLFNYG---MGIHLLKSEEPDNLPKAGKNINP   81 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~-----~~~~~~~~~~~~g---~~~~ll~~~~~~~~~~~~~~~~~   81 (195)
                      .+.+|+|+.|.|+|++++.+||+++|||++..+...     ......|  +..+   ..+.+...           ....
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~l~~~-----------~~~~  205 (297)
T 1lgt_A          139 GEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYF--LHCNERHHTLAIAAF-----------PLPK  205 (297)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEE--EESSSBSCSEEEECC-----------CCSS
T ss_pred             CccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEE--EEeCCCcceEEEEcC-----------CCCC
Confidence            467899999999999999999999999998754210     0001122  2222   22333321           1135


Q ss_pred             CceEEEEEeCCHHHHH---HHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           82 KDNHISFQCENMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~---~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +..|++|.|+|++++.   ++ +++|+++...+..........+||+|||||.|||++...
T Consensus       206 ~~~hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  265 (297)
T 1lgt_A          206 RIHHFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSAR  265 (297)
T ss_dssp             SEEEEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECCC
T ss_pred             CceEEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCCE
Confidence            6889999999988777   88 999999987664432223457999999999999999653

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.61  E-value=9.6e-15  Score=118.47  Aligned_cols=115  Identities=15%  Similarity=0.141  Sum_probs=79.7

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCC---C--CCCccEEEeecC---cEEEEeeeCCCCCCCCCCCCCCC
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS---F--DFDGACRLFNYG---MGIHLLKSEEPDNLPKAGKNINP   81 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~---~--~~~~~~~~~~~g---~~~~ll~~~~~~~~~~~~~~~~~   81 (195)
                      .+.+|+||.|.|+|++++.+|| ++|||++..+...   .  .....|  +..+   ..+.+...           ....
T Consensus       143 ~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~  208 (305)
T 2wl9_A          143 EGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVF--MHCNDRHHSLAFGVG-----------PMDK  208 (305)
T ss_dssp             TTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEE--EESSSSSCSEEECCS-----------CCSS
T ss_pred             CCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEE--EEcCCCceEEEEecC-----------CCCC
Confidence            4578999999999999999999 9999998643210   0  011223  2222   11222110           1235


Q ss_pred             CceEEEEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           82 KDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        82 g~~Hiaf~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      +..|++|.|+|   +++++++|+++|+++...+..........+||+|||||.|||++..
T Consensus       209 ~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          209 RINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             SEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             CceEEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            78999999998   5667889999999988665333222346789999999999999864

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.61  E-value=9.3e-15  Score=120.40  Aligned_cols=116  Identities=19%  Similarity=0.304  Sum_probs=84.6

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC---cEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG---MGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g---~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      ..+.||.|.|+|++++.+||+++|||++..+....  +..|  +..+   ..+.+.....    +  . ....+..|++|
T Consensus       158 ~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~~~~--l~~g~~~~~l~l~~~~~----~--~-~~~~~~~hiaf  226 (330)
T 3zi1_A          158 DPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEK--QRAL--LGYADNQCKLELQGVKG----G--V-DHAAAFGRIAF  226 (330)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTT--TEEE--EESSTTSCEEEEEECSS----C--C-CCBTTCCEEEE
T ss_pred             CceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCC--cEEE--EEeCCceEEEEECCCCC----C--C-CCCCCCceEEE
Confidence            45789999999999999999999999998765422  1233  3333   2333332221    1  1 23456779999


Q ss_pred             EeC--CHHHHHHHHHhCCCeEeccceec---CCcceEEEEEECCCCCEEEEEecC
Q 029305           89 QCE--NMAIVERRLKEMKIDYVKSRVEE---GGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        89 ~v~--dl~~~~~~l~~~gv~~~~~~~~~---~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      .|+  |+++++++|+++|+++...+...   +..+.+.+||.|||||.|||++..
T Consensus       227 ~v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~  281 (330)
T 3zi1_A          227 SCPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDE  281 (330)
T ss_dssp             EECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHH
T ss_pred             EEEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEec
Confidence            996  89999999999999987765431   122458999999999999999964

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.60  E-value=7.5e-15  Score=121.95  Aligned_cols=175  Identities=9%  Similarity=0.015  Sum_probs=111.7

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCC-CCCCCCCceEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKA-GKNINPKDNHI   86 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~-~~~~~~g~~Hi   86 (195)
                      |.+++|+||.+.|+|++++.+||+++|||+++.+....  ++.+.++..| ..+.+.....+...... ....+.++.|+
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~--~g~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~i   78 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSA--DHRSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADI   78 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEET--TEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCC--CceEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEE
Confidence            45889999999999999999999999999988764311  1133244444 44444432222110000 00224689999


Q ss_pred             EEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccchhhhhh
Q 029305           87 SFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQ  166 (195)
Q Consensus        87 af~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  166 (195)
                      +|.|+|+++++++|.++|+++...+..........+.+.||+|..++|++....+..-.+.....   . .++.  . ..
T Consensus        79 af~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~~~~~f~p~~~~~---~-~~~~--~-~~  151 (357)
T 2r5v_A           79 AMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGTSAELPPGFTGS---M-DVTN--H-GK  151 (357)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCSSSCCCCTTCEEC---S-CCCC--T-TC
T ss_pred             EEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecccCCCCCCCCCccc---C-cccc--c-CC
Confidence            99999999999999999999987664211112367889999999999998643111001110000   0 0000  0 00


Q ss_pred             hhhhcCCCCCCCcccc--cccccccccc
Q 029305          167 QIQQEPQINPQSCLSD--SIHAKEDFLH  192 (195)
Q Consensus       167 ~~~~~~~~~~~~~~~~--~~~~~~~~~~  192 (195)
                      .......|+|+++.++  |+.++.+||.
T Consensus       152 ~~~~~~~l~Hv~l~V~~~D~~~~~~FY~  179 (357)
T 2r5v_A          152 GDVDLLGIDHFAICLNAGDLGPTVEYYE  179 (357)
T ss_dssp             TTCCCCEEEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcceEeEEEEEEchhhHHHHHHHHH
Confidence            1112456999999999  9999999994

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.60  E-value=7.9e-15  Score=118.11  Aligned_cols=116  Identities=14%  Similarity=0.100  Sum_probs=80.1

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCC-----CCCccEEEeecC---cEEEEeeeCCCCCCCCCCCCCC
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF-----DFDGACRLFNYG---MGIHLLKSEEPDNLPKAGKNIN   80 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~-----~~~~~~~~~~~g---~~~~ll~~~~~~~~~~~~~~~~   80 (195)
                      +.+++|+|+.|.|+|++++.+||+++|||++..+....     .....|  +..+   ..+.+...           ...
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~-----------~~~  204 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHF--LHCNGRHHTIALAAF-----------PIP  204 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEE--EESSSBSCSEEEECC-----------SCS
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEE--EEECCCcceEEEecC-----------CCC
Confidence            45788999999999999999999999999987542100     001122  2222   12333211           113


Q ss_pred             CCceEEEEEeCCHHH---HHHHHHhCCCeEeccceecCCcceEEEEEECCCCC-EEEEEecC
Q 029305           81 PKDNHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS-MIEICNCD  138 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~---~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn-~iEi~~~~  138 (195)
                      .+..|++|.|+|+++   ++++|+ +|+++...+..........+||+||||| .|||++..
T Consensus       205 ~~~~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          205 KRIHHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             SSEEEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             CceEEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            568999999998665   667898 9999876653332212467899999999 99999865

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.59  E-value=4.1e-14  Score=114.01  Aligned_cols=117  Identities=15%  Similarity=0.181  Sum_probs=83.3

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEEEEEe
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   90 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v   90 (195)
                      ..+.|+.|.|+|++++.+||+++||+++.......  ...|..+..+ ..+..+ ....   +    ...++..|++|.|
T Consensus       163 ~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~---~----~~~~~~~~~~~~v  232 (282)
T 3oxh_A          163 GTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAA--GQNYRVLKAGDAEVGGC-MEPP---M----PGVPNHWHVYFAV  232 (282)
T ss_dssp             TSEEEEEEECSCHHHHHHHHHHHHCCEEEEC---------CEEEEETTEEEEEE-ECCS---S----TTCCSEEEEEEEC
T ss_pred             CccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCC--CcceEEEEcCCccEeee-cCCC---C----CCCCCeEEEEEEe
Confidence            56899999999999999999999999988654101  1122233333 222222 1111   1    2234567899999


Q ss_pred             CCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           91 ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        91 ~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +|+++++++|+++|+++..++.... ++.+.+||.|||||.|||++..+
T Consensus       233 ~dvd~~~~~~~~~G~~~~~~p~~~~-~~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          233 DDADATAAKAAAAGGQVIAEPADIP-SVGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEEET-TTEEEEEEECTTSCEEEEEEEC-
T ss_pred             CCHHHHHHHHHHcCCEEecCCeEcC-CCeEEEEEECCCCCEEEEEecCC
Confidence            9999999999999999988765443 34589999999999999999653

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.57  E-value=1.2e-14  Score=117.73  Aligned_cols=117  Identities=15%  Similarity=0.108  Sum_probs=77.4

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCC---CC--CCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS---FD--FDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNH   85 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~---~~--~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~H   85 (195)
                      .++|+|+.|.|+|++++.+|| ++|||++......   ..  ....|  +..+...+.+.....        ...++..|
T Consensus       147 ~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~~h  215 (302)
T 2ehz_A          147 DQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSF--MHCNARDHSIAFGAM--------PAAKRLNH  215 (302)
T ss_dssp             GGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEE--EBSSSBSCSEEECSC--------CCSSSEEE
T ss_pred             CCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEE--EEeCCCCcEEEEecC--------CCCCceeE
Confidence            458999999999999999999 9999997643110   00  01112  222211111111100        11256899


Q ss_pred             EEEEeCCHHH---HHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           86 ISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        86 iaf~v~dl~~---~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      ++|.|+|+++   ++++|+++|+++...+......+.+.+||+|||||.|||+...
T Consensus       216 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          216 LMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            9999998765   6679999999988665433222346899999999999999863

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.55  E-value=2.2e-14  Score=112.01  Aligned_cols=153  Identities=14%  Similarity=0.161  Sum_probs=96.8

Q ss_pred             ceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEee-eCCCCCCCCCCCCCCCCceEE---EEEe
Q 029305           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLK-SEEPDNLPKAGKNINPKDNHI---SFQC   90 (195)
Q Consensus        15 ~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~-~~~~~~~~~~~~~~~~g~~Hi---af~v   90 (195)
                      -+.+|+|+|++++.+||+++|||++..+.+.      ...++.+....++. .+.+. ...   +...|++|+   ++.+
T Consensus        12 ~~p~LrV~nr~~~~~FY~~vlG~kll~ee~~------~a~lg~~~~~~~L~lEEsp~-~~~---~~~~Glkh~a~i~i~v   81 (244)
T 3e0r_A           12 IIPTLKANNRKLNETFYIETLGMKALLEESA------FLSLGDQTGLEKLVLEEAPS-MRT---RKVEGRKKLARLIVKV   81 (244)
T ss_dssp             EEEEEEESSHHHHHHHHTTTTCCEEEEECSS------EEEEECTTCCEEEEEEECCT-TTC---BCCCSSCSEEEEEEEE
T ss_pred             EeeEEEECCHHHHHHHHHhccCcEEeeccCc------EEEeecCCCcceEEEEeCCC-ccc---ccccccceeeeEEEEc
Confidence            4689999999999999999999999988663      22444432222222 22221 111   345788888   5999


Q ss_pred             CCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccchhhhhhhhhh
Q 029305           91 ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQ  170 (195)
Q Consensus        91 ~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (195)
                      ++-.++.+.|.. +.++...-..++|   .++|+.||+||.|||+..++...|-...+.       ..+...+-+.-+..
T Consensus        82 p~~~el~~lL~~-~~~~~~~~~gdhg---yA~yl~dPEGn~ieiyae~d~~~l~~v~~~-------~~l~~~~~~~gLs~  150 (244)
T 3e0r_A           82 ENPLEIEGILSK-TDSIHRLYKGQNG---YAFEIFSPEDDLILIHAEDDIASLVEVGEK-------PEFQTDLASISLSK  150 (244)
T ss_dssp             SSHHHHHHHHTT-CSCCSEEEECSSS---EEEEEECTTCCEEEEECCSCGGGCEECSSC-------CCCCCCCSCCCCSS
T ss_pred             CCHHHHHHHHhc-ccccccccccCCc---EEEEEECCCCCeEEEEEcCCHHHhhcccch-------hhccccccccCCCC
Confidence            987777766654 4443221112344   589999999999999998887776321110       11211122443333


Q ss_pred             cCCCCCCCcccccccccccccc
Q 029305          171 EPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                       =+| |+..-.||...+  ||+
T Consensus       151 -fti-~I~LnV~d~~~s--Fy~  168 (244)
T 3e0r_A          151 -FEI-SMELHLPTDIES--FLE  168 (244)
T ss_dssp             -EEE-EEEEEECTTCCC--SCC
T ss_pred             -cEE-EEEEEcCchHHH--Hhh
Confidence             237 999999999777  875

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.54  E-value=3.2e-14  Score=121.02  Aligned_cols=178  Identities=7%  Similarity=-0.016  Sum_probs=114.5

Q ss_pred             CCCCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCC---CCCccEEEeecC-cEEEEeeeCCCCC---------
Q 029305            5 VENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF---DFDGACRLFNYG-MGIHLLKSEEPDN---------   71 (195)
Q Consensus         5 ~~~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~---~~~~~~~~~~~g-~~~~ll~~~~~~~---------   71 (195)
                      +...|.+++|+||.|.|.|+++|.+||+++|||+++.+.+..   .....+ .+..| ..+.|.....+..         
T Consensus        17 ~~~~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~-~l~~g~~~l~L~~~~~~~~~~~~~~~~~   95 (424)
T 1sqd_A           17 KSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASY-LLTSGDLRFLFTAPYSPSLSAGEIKPTT   95 (424)
T ss_dssp             CCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEE-EEEETTEEEEEEEECCGGGTTTCCGGGC
T ss_pred             CCccccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEE-EEcCCCEEEEEecCCCCccccccccccc
Confidence            334577889999999999999999999999999987763210   001122 34333 4566665532210         


Q ss_pred             ---CCCCC--------CCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCC
Q 029305           72 ---LPKAG--------KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL  140 (195)
Q Consensus        72 ---~~~~~--------~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~  140 (195)
                         .+...        ...+.|+.|+||.|+|+++++++|+++|+++...+....+ ......+++|+|..++|+.....
T Consensus        96 ~~p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~  174 (424)
T 1sqd_A           96 TASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAE  174 (424)
T ss_dssp             CCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC
T ss_pred             ccccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCC
Confidence               00000        0123689999999999999999999999999887754322 34677788999999999986543


Q ss_pred             CC-CCCCCcchhhcccccccchhhhh--hhhhhcCCCCCCCcccccccccccccc
Q 029305          141 PV-VPLAGDAVRIRSCTSTVNCNFHQ--QQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       141 ~~-~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                      .. +..-..+     . .+++  ...  ........|.|++..++|+.++.+||.
T Consensus       175 ~~~~~~f~p~-----~-~~~~--~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~  221 (424)
T 1sqd_A          175 DTEKSEFLPG-----F-ERVE--DASSFPLDYGIRRLDHAVGNVPELGPALTYVA  221 (424)
T ss_dssp             ------CCTT-----C-EECC--TTTCCCCCSSEEEEEEEEEECSCHHHHHHHHH
T ss_pred             CCCccccCCC-----c-cccc--ccccCCCcCCcceEeeEEEeeCCHHHHHHHHH
Confidence            21 1000000     0 1111  000  011123468999999999999999984

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.48  E-value=8.3e-13  Score=98.40  Aligned_cols=122  Identities=8%  Similarity=0.021  Sum_probs=76.1

Q ss_pred             cCccceEEEEcCC--HHHHHHHHHhccCCeEeecC-------CCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCC
Q 029305           11 LKSLNHISLVCRS--VEASLDFYQNVLGFFPIRRP-------GSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNIN   80 (195)
Q Consensus        11 i~~i~hv~l~v~d--l~~s~~FY~~~LG~~~~~~~-------~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~   80 (195)
                      .+.+ ++.|.|+|  ++++++||+++||+++....       ...+....+..+..+ ..+.+.........+.   ...
T Consensus        23 ~~~i-~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~~~~~~~~---~~~   98 (166)
T 1xy7_A           23 FTEF-KQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFST---AKS   98 (166)
T ss_dssp             EEEE-EEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCC---CCT
T ss_pred             CceE-EEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCCcccCCcc---ccC
Confidence            3444 78899999  99999999999999987542       100001122223333 3344332111000010   110


Q ss_pred             -CCceEEEEEeCCHHHHHHHHHhCCCeEeccceecC-CcceEEEEEECCCCCEEEEEecC
Q 029305           81 -PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEG-GINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        81 -~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~-~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                       ....|++|.|+|+++++++|+++|++ ..++.... .+ .+.++|.||+||.|+|++..
T Consensus        99 ~~~g~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~-~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A           99 EGSGVTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL-GFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             TSCCCEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT-TEEEEEECTTSCEEEEEC--
T ss_pred             CCCcEEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc-cEEEEEECCCCCEEEEEeec
Confidence             22348999999999999999999999 77664320 23 48999999999999999853

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.48  E-value=1e-13  Score=115.06  Aligned_cols=130  Identities=14%  Similarity=0.264  Sum_probs=88.0

Q ss_pred             CcccCccceEEEEcC--CHHHHHHHHHhccCCeEeecCC-CCCCCc-cEEEeec---CcEEEEeeeCCCC-CCCC---CC
Q 029305            8 PLCLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPG-SFDFDG-ACRLFNY---GMGIHLLKSEEPD-NLPK---AG   76 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~--dl~~s~~FY~~~LG~~~~~~~~-~~~~~~-~~~~~~~---g~~~~ll~~~~~~-~~~~---~~   76 (195)
                      .+.+++|+||.|.|+  |++++.+||+++|||+...... ..++.+ ....+..   +..+.+.+..... ..+.   ..
T Consensus       153 ~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~~  232 (357)
T 2r5v_A          153 DVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLK  232 (357)
T ss_dssp             TCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHHH
T ss_pred             CCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHHHH
Confidence            356889999999999  9999999999999999875421 001111 1112222   2467776654221 0100   00


Q ss_pred             CCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceec-CCcc---------------eEEEEEECCCCCEEEEEec
Q 029305           77 KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE-GGIN---------------VDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        77 ~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~-~~~~---------------~~~~~~~DPdGn~iEi~~~  137 (195)
                      ....+|+.|+||.|+|+++++++|+++|+++...+... ..++               ...+|+.||||+.|||++.
T Consensus       233 ~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          233 DHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             HHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             hcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence            01346899999999999999999999999987765211 0000               1268999999999999985

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.47  E-value=2.7e-14  Score=121.23  Aligned_cols=176  Identities=10%  Similarity=0.032  Sum_probs=114.1

Q ss_pred             CCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCC--CCccEEEeecC-cEEEEeeeCCCCC------CCC---
Q 029305            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD--FDGACRLFNYG-MGIHLLKSEEPDN------LPK---   74 (195)
Q Consensus         7 ~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~--~~~~~~~~~~g-~~~~ll~~~~~~~------~~~---   74 (195)
                      ..|.+++|+||.|.|.|++++.+||++.|||++..+.+...  ......++..| ..+.|.....+..      .+.   
T Consensus        25 ~~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~~  104 (418)
T 1sp8_A           25 DRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSA  104 (418)
T ss_dssp             CSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCH
T ss_pred             ccccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCcccccccccccccc
Confidence            35678999999999999999999999999999887632100  01111144444 4566655432211      000   


Q ss_pred             C-----CCCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCC-CCCCCCCc
Q 029305           75 A-----GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL-PVVPLAGD  148 (195)
Q Consensus        75 ~-----~~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~-~~~p~~~~  148 (195)
                      .     ....+.|+.|+||.|+|+++++++++++|+++...+....+ ......+.+|+|..++|+....- ..|+... 
T Consensus       105 ~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~-~~~~~~i~~~Gg~~~~lvd~~~~~~~~~f~p-  182 (418)
T 1sp8_A          105 AAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDGAAGEPFLP-  182 (418)
T ss_dssp             HHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTTGGGSSSST-
T ss_pred             hhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccC-ceEEEEEecCCCEEEEEEccCCCCCCcccCC-
Confidence            0     00123689999999999999999999999999887744322 23566778999999999986532 2221111 


Q ss_pred             chhhcccccccchhhhhhhhhhcCCCCCCCcccccccccccccc
Q 029305          149 AVRIRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLH  192 (195)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (195)
                      +     . .+++..  +........|.|+++.++|+.++.+||.
T Consensus       183 ~-----~-~~~~~~--~~~~~~~~~idHv~i~V~dl~~a~~FY~  218 (418)
T 1sp8_A          183 G-----F-EGVASP--GAADYGLSRFDHIVGNVPELAPAAAYFA  218 (418)
T ss_dssp             T-----C-EECCCT--TCCCCSEEEEEEEEEECSCHHHHHHHHH
T ss_pred             C-----C-cccCCC--CCCCCCcceEeeEEEecCCHHHHHHHHH
Confidence            1     0 111100  0111123568999999999999999984

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.44  E-value=8.1e-15  Score=121.94  Aligned_cols=170  Identities=12%  Similarity=0.104  Sum_probs=109.4

Q ss_pred             CCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCc-EEEEeeeCCCCCCCCC-CCCCCCCce
Q 029305            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGM-GIHLLKSEEPDNLPKA-GKNINPKDN   84 (195)
Q Consensus         7 ~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~-~~~ll~~~~~~~~~~~-~~~~~~g~~   84 (195)
                      ++|.+++++||.+.|.|++++.+|| +.|||+++.+...   ...+ ++..|. .+.+..  .+...... ....+.++.
T Consensus         6 ~~~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~---~~~~-l~~~g~~~l~l~~--~~~~~~~~~~~~~g~gv~   78 (357)
T 1cjx_A            6 NPMGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRS---KNVH-LYRQGEINLILNN--EPNSIASYFAAEHGPSVC   78 (357)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESS---SSEE-EEEETTEEEEEEC--CSSSHHHHHHHHHSSEEE
T ss_pred             CCcccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCC---eeEE-EEecCCEEEEEEC--CCCchhhhhhhhcCCeEE
Confidence            5788999999999999999999999 7899999876432   1233 454443 333322  21110000 002346899


Q ss_pred             EEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccchhhh
Q 029305           85 HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFH  164 (195)
Q Consensus        85 Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  164 (195)
                      |+||.|+|++++.+++.++|+++...+...+  ......+.+|+|..++++........++. .+   ........  . 
T Consensus        79 ~iaf~V~D~~~~~~~l~~~G~~~~~~~~~~g--~~~~~~~~~~gg~~~~~vd~~~~~~~~~~-~~---f~~~~~~~--~-  149 (357)
T 1cjx_A           79 GMAFRVKDSQKAYNRALELGAQPIHIDTGPM--ELNLPAIKGIGGAPLYLIDRFGEGSSIYD-ID---FVYLEGVE--R-  149 (357)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCBCCCCCCTT--CBCCCEEECGGGCEEEEECCCSSSCCHHH-HH---EEECTTCC--S-
T ss_pred             EEEEEeCCHHHHHHHHHHcCCEEeecCCCCC--cEEEEeeeCCCCeEEEEECCCCCCCCcCC-CC---cccCCccc--c-
Confidence            9999999999999999999999877653221  12456789999999999975432111110 00   00000000  0 


Q ss_pred             hhhhhhcCCCCCCCcccc--cccccccccc
Q 029305          165 QQQIQQEPQINPQSCLSD--SIHAKEDFLH  192 (195)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  192 (195)
                      .-.......|.|+++.++  |+.++.+||.
T Consensus       150 ~~~~~~i~~idHv~l~V~~~dl~~a~~FY~  179 (357)
T 1cjx_A          150 NPVGAGLKVIDHLTHNVYRGRMVYWANFYE  179 (357)
T ss_dssp             SCCTTSEEEEEEECEECCTTHHHHHHHHHH
T ss_pred             CCCCCCeeEECceEEeechhhHHHHHHHHH
Confidence            000112345889999999  9999999994

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.42  E-value=3.4e-12  Score=102.37  Aligned_cols=109  Identities=13%  Similarity=0.084  Sum_probs=76.8

Q ss_pred             ceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCc-----EEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGM-----GIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        15 ~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~-----~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      -++.+.|+|+++|.+||+++||+++......   ++.+..+..+.     .+.+....      .   .......+++|.
T Consensus       185 ~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~  252 (301)
T 2zw5_A          185 VITELPVRDVAATLRLVEAALGARTAFAIGD---PPEFAEAALTPWSAGPRFRLAAVP------G---PGPVEPVRLHLD  252 (301)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEET---TEEEEEEESSSSSSSSEEEEEECC------C---SSCCCCCEEEEE
T ss_pred             eEEEEEeCCHHHHHHHHHHhcCCeEeeecCC---CccEEEEEcCCCccccccccccCC------C---cCCCCceEEEEE
Confidence            4788999999999999999999998743221   11222333321     22221110      0   111234689999


Q ss_pred             eC-CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           90 CE-NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        90 v~-dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      |+ |++++++++.++|+++..++... .++.+.++|.|||||.|||++
T Consensus       253 v~~dvd~~~~~~~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~~~~~~  299 (301)
T 2zw5_A          253 AAGTADSLHRRAVDAGARVDGPPVRR-PWGRSEFVITLPEGHELTVSA  299 (301)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEEEC-TTSCEEEEEECTTSCEEEEEE
T ss_pred             cCccHHHHHHHHHHcCCccccCcccC-CCcceEEEEECCCCCEEEeeC
Confidence            99 99999999999999998776443 345589999999999999987

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.42  E-value=2.1e-12  Score=107.76  Aligned_cols=121  Identities=19%  Similarity=0.219  Sum_probs=77.0

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      ..+.+|+||+|.|+|++++.+||++ |||.+.......+.......+..+...|-+...         ....++++|+||
T Consensus       148 ~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~---------~~~~~~lhHvaf  217 (365)
T 4ghg_A          148 GELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALT---------GGNGPRLHHVAF  217 (365)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSSSCSEEEE---------ESSBSEEEEEEE
T ss_pred             ccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCcccceeee---------cCCCCceeEEEE
Confidence            3568899999999999999999977 999887643211101011122222111111000         023357999999


Q ss_pred             EeCCHHHH---HHHHHhCCCe--EeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           89 QCENMAIV---ERRLKEMKID--YVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        89 ~v~dl~~~---~~~l~~~gv~--~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      .|+|++++   .++|.++|+.  +...+...+-.....+||+||+||.||++....
T Consensus       218 ~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g~  273 (365)
T 4ghg_A          218 STHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDY  273 (365)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             ecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCCc
Confidence            99977665   5688888885  333442222223467999999999999998754

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.38  E-value=4.8e-11  Score=87.21  Aligned_cols=114  Identities=11%  Similarity=-0.050  Sum_probs=74.6

Q ss_pred             eEEEEcC-CHHHHHHHHHhccCCeEeecC--CCCC----------CCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCC
Q 029305           16 HISLVCR-SVEASLDFYQNVLGFFPIRRP--GSFD----------FDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINP   81 (195)
Q Consensus        16 hv~l~v~-dl~~s~~FY~~~LG~~~~~~~--~~~~----------~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~   81 (195)
                      +..|.|. |+++|++||+++||+++....  +..+          ....+..+..+ ..+.+. ...+. . ..  ....
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~-d~~~~-~-~~--~~~~   80 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMAS-DNHPA-Y-PY--EGIK   80 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEE-ECCTT-S-CC--CCCC
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEE-cCCCc-c-CC--CCCC
Confidence            4788898 999999999999999987531  1000          01112223333 223222 21110 0 10  1122


Q ss_pred             CceEEEEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           82 KDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        82 g~~Hiaf~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      | .+++|.|+|   +++++++|. .|.++..++.. ..|+.+.++|.||+|+.|+|...
T Consensus        81 g-~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~-~~wG~r~~~v~Dp~G~~w~l~~~  136 (149)
T 1u6l_A           81 G-CSISLNVDSKAEAERLFNALA-EGGSVQMPLGP-TFWAASFGMFTDRFGVAWMVNCE  136 (149)
T ss_dssp             S-EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEE-ETTEEEEEEEECTTSCEEEEEES
T ss_pred             c-eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccc-cCcccceEEEECCCCCEEEEEEe
Confidence            3 589999998   889999985 79888877644 44566889999999999999984

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.33  E-value=2.1e-12  Score=108.65  Aligned_cols=177  Identities=10%  Similarity=0.028  Sum_probs=112.6

Q ss_pred             CcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCC-CCC--ccEEEeec-CcEEEEeeeCCCCC-CCCCC-CCCCC
Q 029305            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF-DFD--GACRLFNY-GMGIHLLKSEEPDN-LPKAG-KNINP   81 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~-~~~--~~~~~~~~-g~~~~ll~~~~~~~-~~~~~-~~~~~   81 (195)
                      ...+++|+||.+.|.|++++.+||+++|||+.....+-. ...  ..+ .+.. +..+.|.....+.+ ..... ...++
T Consensus         6 ~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~-~l~~G~i~~~L~~p~~p~s~~~a~fl~~hG~   84 (393)
T 3isq_A            6 RGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSH-VIKQGKIVFVLSSALNPWNKEMGDHLVKHGD   84 (393)
T ss_dssp             SCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEE-EEEETTEEEEEEEESSTTCHHHHHHHHHHCS
T ss_pred             CCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEE-EEecCCEEEEEecCCCCCchHHHHHHHhcCC
Confidence            456899999999999999999999999999988743210 001  122 3433 45566665433321 00000 12356


Q ss_pred             CceEEEEEeCCHHHHHHHHHhCCCeEeccceec--CCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhccccccc
Q 029305           82 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTV  159 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~--~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~  159 (195)
                      |..|+||.|+|+++++++++++|+++..++...  +........+++|+|..+.+++...-...-++...  ....    
T Consensus        85 Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y~~~flpg~~--~~~~----  158 (393)
T 3isq_A           85 GVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYE--APAF----  158 (393)
T ss_dssp             EEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSSSCTTCB--SCSC----
T ss_pred             cEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccCcCCCCCCcc--cccc----
Confidence            899999999999999999999999998877432  11135678899999999999975321111111110  0000    


Q ss_pred             chhhhhhhh--hhcCCCCCCCccccc--ccccccccc
Q 029305          160 NCNFHQQQI--QQEPQINPQSCLSDS--IHAKEDFLH  192 (195)
Q Consensus       160 ~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~  192 (195)
                      +. ......  ..=..|.|++...+|  ..++.+||.
T Consensus       159 ~~-~~~~~~~~~~l~~IDHv~i~V~~~~l~~a~~fY~  194 (393)
T 3isq_A          159 MD-PLLPKLPKCSLEMIDHIVGNQPDQEMVSASEWYL  194 (393)
T ss_dssp             CC-TTGGGSCCCCEEEEEEEEEECCTTCHHHHHHHHH
T ss_pred             cc-ccccCCCCCCeeEEeEEEEecCccHHHHHHHHHH
Confidence            00 000000  011358999999998  999999985

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.33  E-value=8.7e-11  Score=84.37  Aligned_cols=116  Identities=16%  Similarity=0.167  Sum_probs=76.1

Q ss_pred             CccceEEEEcC--CHHHHHHHHHhcc-CCeEee--cCCCC--CCCc--cEEEeecCcE-EEEeeeCCCCCCCCCCCCCCC
Q 029305           12 KSLNHISLVCR--SVEASLDFYQNVL-GFFPIR--RPGSF--DFDG--ACRLFNYGMG-IHLLKSEEPDNLPKAGKNINP   81 (195)
Q Consensus        12 ~~i~hv~l~v~--dl~~s~~FY~~~L-G~~~~~--~~~~~--~~~~--~~~~~~~g~~-~~ll~~~~~~~~~~~~~~~~~   81 (195)
                      .+|. ..|.+.  |++++.+||+++| |+++..  +.+..  ...+  .+..+..+.. +.+......   +.   ....
T Consensus         5 ~~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~---~~---~~~~   77 (136)
T 1u7i_A            5 ARVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVR---HA---FDFT   77 (136)
T ss_dssp             CEEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSC---CS---CCCC
T ss_pred             ccce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCCC---CC---CCCC
Confidence            3454 678886  9999999999999 999874  22110  0011  1222333322 322222110   11   1112


Q ss_pred             CceEEEEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           82 KDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        82 g~~Hiaf~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      ....++|.|+|   +++++++|. +|.++..++.. ..|+.+.+++.||+|+.|+|..
T Consensus        78 ~~~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~-~~~G~~~~~~~Dp~G~~w~l~~  133 (136)
T 1u7i_A           78 PAFSFFVDCESNAQIERLAEALS-DGGKALMPLGD-YGFSQRFAWLADRFGVSWQLNL  133 (136)
T ss_dssp             TTEEEEEECCCHHHHHHHHHHHH-TTSEEEEEEEC-CSSSSEEEEEECTTSCEEEEEE
T ss_pred             CceEEEEEcCCHHHHHHHHHHHH-cCCEEeccccc-CCCcceEEEEECCCCCEEEEEe
Confidence            23578999999   999999999 99998877643 4455688899999999999987

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.23  E-value=2.6e-10  Score=82.53  Aligned_cols=116  Identities=9%  Similarity=0.058  Sum_probs=73.6

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhcc-CCeEeec--CCCC----CCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCc
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVL-GFFPIRR--PGSF----DFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKD   83 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~L-G~~~~~~--~~~~----~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~   83 (195)
                      +++|....+.+.|.++|.+||+++| |+++...  .+..    +....+..+..+....+.....+ .  .   .  .. 
T Consensus         3 ~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~d~~~-~--~---~--~~-   73 (139)
T 1tsj_A            3 IPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANS-G--T---E--LP-   73 (139)
T ss_dssp             CCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC---------------C-
T ss_pred             CCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEECCCC-C--C---C--ce-
Confidence            3456555445569999999999999 9998742  1100    00112223444433322222211 1  0   1  11 


Q ss_pred             eEEEEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           84 NHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        84 ~Hiaf~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      ..+++.|+|   +++++++|. .|.++..++.. ..|+.+..+++||+|+.|+|...
T Consensus        74 ~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~-~~wG~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           74 ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTN-MPPYREFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEE-ETTEEEEEEEECTTSCEEEEEEC
T ss_pred             EEEEEECCCHHHHHHHHHHHh-CCCEEeecccc-cCCCceEEEEECCCCCEEEEeec
Confidence            468899986   788899998 79998877643 45677999999999999999974

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.18  E-value=9.6e-11  Score=98.19  Aligned_cols=129  Identities=11%  Similarity=0.206  Sum_probs=86.6

Q ss_pred             cccCccceEEEEcC--CHHHHHHHHHhccCCeEeecCCC----CCCCc-cEEEeec---CcEEEEeeeCCCCCCCC--C-
Q 029305            9 LCLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGS----FDFDG-ACRLFNY---GMGIHLLKSEEPDNLPK--A-   75 (195)
Q Consensus         9 ~~i~~i~hv~l~v~--dl~~s~~FY~~~LG~~~~~~~~~----~~~~~-~~~~~~~---g~~~~ll~~~~~~~~~~--~-   75 (195)
                      ..+.+|+||++.|+  |++++.+||+++|||+.....+.    .+..+ .+..+..   +..+.+.+.........  . 
T Consensus       180 ~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~~~  259 (381)
T 1t47_A          180 RTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEY  259 (381)
T ss_dssp             CSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHH
T ss_pred             CCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHHHH
Confidence            56889999999999  99999999999999998765320    11111 1212222   23466665542111000  0 


Q ss_pred             -CCCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCC-c---------------ceEEEEEECCCCCEEEEEec
Q 029305           76 -GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGG-I---------------NVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        76 -~~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~-~---------------~~~~~~~~DPdGn~iEi~~~  137 (195)
                       ....++|++|+||.|+|+.++.++|+++|+++...+..... .               ....+|-.||+|..+.|++.
T Consensus       260 l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift~  338 (381)
T 1t47_A          260 LEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFTK  338 (381)
T ss_dssp             HHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEBC
T ss_pred             HHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEecc
Confidence             00135689999999999999999999999998876532211 0               01247788999999999874

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.13  E-value=2.3e-09  Score=80.28  Aligned_cols=121  Identities=11%  Similarity=0.114  Sum_probs=77.6

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCC--CCC-----C-----Cc--cEEEeecC-cEEEEeeeCCCCCCC
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPG--SFD-----F-----DG--ACRLFNYG-MGIHLLKSEEPDNLP   73 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~--~~~-----~-----~~--~~~~~~~g-~~~~ll~~~~~~~~~   73 (195)
                      |++.+| ...|.++|.+++++||+++||++++.+..  ..+     .     .+  ....+..+ ..+.+..  .... +
T Consensus        22 mmm~~i-~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D--~~g~-~   97 (172)
T 3l20_A           22 FYMTAL-FPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSD--SFGR-A   97 (172)
T ss_dssp             CCCCEE-EEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEE--CTTC-C
T ss_pred             EecCcE-EEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEEC--CCCC-C
Confidence            444455 56777789999999999999999765311  100     0     11  22233434 3333332  2111 1


Q ss_pred             CCCCCCCCCceEEEEEe--------CCHHHHHHHHHhCC-CeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           74 KAGKNINPKDNHISFQC--------ENMAIVERRLKEMK-IDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        74 ~~~~~~~~g~~Hiaf~v--------~dl~~~~~~l~~~g-v~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                          ....+...+++.+        +++++++++|.+.| +++..++. +..|+.+..+++||+|+.|+|....
T Consensus        98 ----~~~~~~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~-~~~wG~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A           98 ----DKINNGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFA-DQFWGGKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             ----CCCCSSEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEE-ECTTSSEEEEEECTTSCEEEEEEEC
T ss_pred             ----CCCCCcEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCcc-ccCCCcEEEEEECCCCCEEEEEeCC
Confidence                1122334566666        57999999999999 78887663 4456668899999999999998753

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.13  E-value=1.4e-10  Score=96.21  Aligned_cols=130  Identities=13%  Similarity=0.139  Sum_probs=85.8

Q ss_pred             cccCccceEEEEcC--CHHHHHHHHHhccCCeEeecCCC-CCCCc---cEEEeecC-cEEEEeee-CCCCCCCCC--CCC
Q 029305            9 LCLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGS-FDFDG---ACRLFNYG-MGIHLLKS-EEPDNLPKA--GKN   78 (195)
Q Consensus         9 ~~i~~i~hv~l~v~--dl~~s~~FY~~~LG~~~~~~~~~-~~~~~---~~~~~~~g-~~~~ll~~-~~~~~~~~~--~~~   78 (195)
                      ..+.+|+||++.|+  |++++.+||+++|||+....... .+..+   .+.....+ ..+.|.+. .........  ...
T Consensus       154 ~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~~~  233 (357)
T 1cjx_A          154 AGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQF  233 (357)
T ss_dssp             TSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHH
T ss_pred             CCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhHHhc
Confidence            56789999999999  99999999999999998765320 01111   11122223 56777765 222110000  001


Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHhCCCeEec-cceec--------CCcce--------EEEEEEC----CCCCEEEEEec
Q 029305           79 INPKDNHISFQCENMAIVERRLKEMKIDYVK-SRVEE--------GGINV--------DQLFFHD----PDGSMIEICNC  137 (195)
Q Consensus        79 ~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~-~~~~~--------~~~~~--------~~~~~~D----PdGn~iEi~~~  137 (195)
                      ...|++|+||.|+|++++.++|+++|+++.. .+...        +..+.        ..+|-.|    |+|+.++|++.
T Consensus       234 ~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift~  313 (357)
T 1cjx_A          234 NGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFSE  313 (357)
T ss_dssp             TSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEBC
T ss_pred             CCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEecc
Confidence            3567999999999999999999999999877 44100        10010        1367788    88999999875


Q ss_pred             C
Q 029305          138 D  138 (195)
Q Consensus       138 ~  138 (195)
                      +
T Consensus       314 ~  314 (357)
T 1cjx_A          314 T  314 (357)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.04  E-value=1.6e-08  Score=73.00  Aligned_cols=113  Identities=12%  Similarity=0.072  Sum_probs=71.7

Q ss_pred             eEEEEcC-CHHHHHHHHHhccC-CeEeec--CCCC--CCCc--cEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305           16 HISLVCR-SVEASLDFYQNVLG-FFPIRR--PGSF--DFDG--ACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus        16 hv~l~v~-dl~~s~~FY~~~LG-~~~~~~--~~~~--~~~~--~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      ...|.++ |.+++.+||+++|| .++...  .+..  +.++  ....+..+ ..+.+......  ..    ........+
T Consensus        12 ~P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~~~--~~----~~~~~~~~l   85 (138)
T 3oms_A           12 TTFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVN--HN----FTFTPAMSL   85 (138)
T ss_dssp             CEEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECSSC--CS----CCCCTTSCE
T ss_pred             EEEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCCCC--CC----CCCCCCEEE
Confidence            4566677 89999999999999 566432  1100  0111  12234434 33333322111  11    111224568


Q ss_pred             EEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           87 SFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        87 af~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      ++.|+|   +++++++|. .|.++..++. +..|+.+..++.||+|+.|.|..
T Consensus        86 ~l~~~d~~evd~~~~~l~-~Gg~v~~p~~-~~~wg~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           86 YVTCETEEEIDTVFHKLA-QDGAILMPLG-SYPFSKKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             EEEESSHHHHHHHHHHHH-TTCEEEEEEE-EETTEEEEEEEECTTSCEEEEEE
T ss_pred             EEEcCCHHHHHHHHHHHH-cCCeEecCcc-cccCCcEEEEEECCCCCEEEEEe
Confidence            999998   999999995 6878877764 34456689999999999999975

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=98.96  E-value=1.2e-09  Score=91.89  Aligned_cols=104  Identities=13%  Similarity=0.199  Sum_probs=73.2

Q ss_pred             CcccCccceEEEEcCC--HHHHHHHHHhccCCeEeecCCC----CCCCcc-EEEee---cCcEEEEeeeCCCCC-CC-CC
Q 029305            8 PLCLKSLNHISLVCRS--VEASLDFYQNVLGFFPIRRPGS----FDFDGA-CRLFN---YGMGIHLLKSEEPDN-LP-KA   75 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~d--l~~s~~FY~~~LG~~~~~~~~~----~~~~~~-~~~~~---~g~~~~ll~~~~~~~-~~-~~   75 (195)
                      ...+++|+||++.|.|  ++++.+||+++|||+..+..+.    .++.+. +..+.   ....+.|++...... .+ ..
T Consensus       168 ~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I~~  247 (393)
T 3isq_A          168 KCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQE  247 (393)
T ss_dssp             CCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCSBCCHHHH
T ss_pred             CCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCCCCCHHHH
Confidence            3568999999999998  9999999999999998765321    111222 22232   225688887653111 00 00


Q ss_pred             C--CCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccc
Q 029305           76 G--KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSR  111 (195)
Q Consensus        76 ~--~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~  111 (195)
                      .  ...+.|++|+||.|+|+.+.+++|+++|+++...|
T Consensus       248 fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P  285 (393)
T 3isq_A          248 YVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVP  285 (393)
T ss_dssp             HHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             HHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCC
Confidence            0  12467899999999999999999999999988765

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=98.90  E-value=1.7e-09  Score=91.80  Aligned_cols=103  Identities=16%  Similarity=0.176  Sum_probs=71.1

Q ss_pred             CcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCC----CCc---cEEEe-e-cCcEEEEeeeCC---CCCCCCC
Q 029305            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD----FDG---ACRLF-N-YGMGIHLLKSEE---PDNLPKA   75 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~----~~~---~~~~~-~-~g~~~~ll~~~~---~~~~~~~   75 (195)
                      ...+.+|+||++.|.|++++.+||+++|||+..++....+    ..+   .+ +. . ....+.+++...   ..+....
T Consensus       197 ~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~-l~~~~g~~~l~l~e~~~~~~~~s~i~~  275 (424)
T 1sqd_A          197 DYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAV-LASNDEMVLLPINEPVHGTKRKSQIQT  275 (424)
T ss_dssp             CSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEE-EECTTSCSEEEEEEECCC---CCHHHH
T ss_pred             cCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEE-EEcCCCcEEEEEecccccCCCcchhhh
Confidence            3467899999999999999999999999999987642111    111   12 21 1 225677776641   1111100


Q ss_pred             C--CCCCCCceEEEEEeCCHHHHHHHHHh----CCCeEeccc
Q 029305           76 G--KNINPKDNHISFQCENMAIVERRLKE----MKIDYVKSR  111 (195)
Q Consensus        76 ~--~~~~~g~~Hiaf~v~dl~~~~~~l~~----~gv~~~~~~  111 (195)
                      .  ...+.|++|+||.|+|+.++.++|++    .|+++...|
T Consensus       276 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          276 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             hhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence            0  02456899999999999999999999    899998764

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=98.89  E-value=1.7e-09  Score=91.70  Aligned_cols=104  Identities=11%  Similarity=0.155  Sum_probs=70.8

Q ss_pred             CcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCC-------CCccEEEee-cCcEEEEeeeCCC---CCCCCCC
Q 029305            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD-------FDGACRLFN-YGMGIHLLKSEEP---DNLPKAG   76 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~-------~~~~~~~~~-~g~~~~ll~~~~~---~~~~~~~   76 (195)
                      ...+.+|+||++.|.|++++.+||+++|||+..++....+       ....+.... ....+.+.+....   .+.....
T Consensus       194 ~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~f  273 (418)
T 1sp8_A          194 DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTF  273 (418)
T ss_dssp             CCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHH
T ss_pred             CCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccCCCcchhhh
Confidence            3467899999999999999999999999999887542111       111221111 2245666655321   1100000


Q ss_pred             --CCCCCCceEEEEEeCCHHHHHHHHHh----CCCeEeccc
Q 029305           77 --KNINPKDNHISFQCENMAIVERRLKE----MKIDYVKSR  111 (195)
Q Consensus        77 --~~~~~g~~Hiaf~v~dl~~~~~~l~~----~gv~~~~~~  111 (195)
                        ...++|++|+||.|+|+.++.++|++    .|+++...|
T Consensus       274 l~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          274 LDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence              02456899999999999999999999    799998764

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=98.04  E-value=1.6e-05  Score=72.70  Aligned_cols=124  Identities=22%  Similarity=0.270  Sum_probs=76.9

Q ss_pred             cccCccceEEEEc---CCHHHHHHHHHhccCCeEeecCCCCCCCccEEEe-ecC--cEEEEeee-CCCC----------C
Q 029305            9 LCLKSLNHISLVC---RSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLF-NYG--MGIHLLKS-EEPD----------N   71 (195)
Q Consensus         9 ~~i~~i~hv~l~v---~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~~g--~~~~ll~~-~~~~----------~   71 (195)
                      ..+.+...+.+..   ..++++++||+++|++......+..   ..+.++ ..+  ..+++... ++..          .
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (941)
T 3opy_B            5 SLFNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNSNQK---LFWLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRN   81 (941)
T ss_dssp             CCSCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSCSCC---C---EECCTTSCCEEEEECSSCSCHHHHHHHHHHHC
T ss_pred             ceecceeEEEEEeCCHHHHHHHHHHHHhhccceeccccCCc---ceeEEEecCCCeEEEEEEeccccchhHHHHHHHHhh
Confidence            4566777777776   4789999999999999887654421   112123 122  23443322 1100          0


Q ss_pred             CCC---CCCCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           72 LPK---AGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        72 ~~~---~~~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ...   ...-. .-..|++|.+.|++++.++|.+.+.++...|.+.+   -..+|..||+||.|+|....+
T Consensus        82 ~~~~~~~~dW~-~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~---~~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           82 LTRSLYRKDWR-SIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEIS---PFEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             CC-----------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCS---CEEECCSSCCEEEECC-CCSS
T ss_pred             hhccccccccc-ccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCC---CceEEeECCCCCEEEEeccCC
Confidence            110   00011 12239999999999999999999998877663222   269999999999999999764

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=97.64  E-value=5.7e-05  Score=60.34  Aligned_cols=92  Identities=12%  Similarity=0.118  Sum_probs=63.9

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccC-----CeEeecCCCC--CCCccEEEeecCcEEEEeeeCCCCCC--------C-
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLG-----FFPIRRPGSF--DFDGACRLFNYGMGIHLLKSEEPDNL--------P-   73 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG-----~~~~~~~~~~--~~~~~~~~~~~g~~~~ll~~~~~~~~--------~-   73 (195)
                      |+.+|+|+++.|.+++        .||     |.+.....+.  ........+ .+..++++...++...        + 
T Consensus        21 M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~f-dg~YLElIai~~~~~~~~~~~~~~~~   91 (274)
T 3p8a_A           21 MILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYI-NENYIELLDVENNEKLKKMAKTIEGG   91 (274)
T ss_dssp             CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEEESCHHHHHHHTTSTGGG
T ss_pred             ccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEee-CCEEEEEEeecCcccccccccccCcc
Confidence            4688999999999874        467     8876643322  112233245 6789999988754211        0 


Q ss_pred             -CCC-----CCCCCCceEEEEEeCCHHHHHHHHHhCCCeEecc
Q 029305           74 -KAG-----KNINPKDNHISFQCENMAIVERRLKEMKIDYVKS  110 (195)
Q Consensus        74 -~~~-----~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~  110 (195)
                       ...     ...++|+.++|++++|+++..++|.+.|+.+...
T Consensus        92 ~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p  134 (274)
T 3p8a_A           92 VAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGP  134 (274)
T ss_dssp             TCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEE
T ss_pred             chHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCC
Confidence             000     1346799999999999999999999999987543

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=97.63  E-value=0.0044  Score=45.51  Aligned_cols=104  Identities=13%  Similarity=0.047  Sum_probs=64.3

Q ss_pred             eEEEEcC-CHHHHHHHHHhcc-CCeEee--cCCCC---CCCc-c-EEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305           16 HISLVCR-SVEASLDFYQNVL-GFFPIR--RPGSF---DFDG-A-CRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus        16 hv~l~v~-dl~~s~~FY~~~L-G~~~~~--~~~~~---~~~~-~-~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      ...|.++ |.+++.+||+++| |.++..  +.+..   +.++ . ...+..+.....+....+ ..     .. .....+
T Consensus         8 ~PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~~p-~~-----~~-~~~~sl   80 (163)
T 1u69_A            8 TICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGP-AF-----RH-SEAFSF   80 (163)
T ss_dssp             EEEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCT-TC-----CC-CTTEEE
T ss_pred             eEEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECCCC-Cc-----CC-CCceEE
Confidence            3456666 9999999999999 998774  22110   0011 1 123344433333322211 11     11 223468


Q ss_pred             EEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           87 SFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        87 af~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      ++.|+|   +++++++|.+.|.++.     ..|      .++||.|+.|-|...
T Consensus        81 ~v~~~d~~e~d~~~~~L~~~Gg~v~-----~~G------~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           81 QVATDDQAETDRLWNAIVDNGGEES-----ACG------WCRDKWGISWQITPR  123 (163)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCEEC-----STT------EEECTTSCEEEEEEH
T ss_pred             EEEeCCHHHHHHHHHHHHhCCCEEE-----EEE------EEECCCCCEEEEEeE
Confidence            888886   7788899987787776     233      699999999999974

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=97.04  E-value=0.00053  Score=53.48  Aligned_cols=90  Identities=11%  Similarity=0.173  Sum_probs=62.1

Q ss_pred             ccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeC-
Q 029305           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE-   91 (195)
Q Consensus        13 ~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~-   91 (195)
                      .+ ||+|.|.|++++  ||++ +|+      +              ..+.+.+..++ .++... ...-|+..+-|.++ 
T Consensus       152 ti-~I~LnV~d~~~s--Fy~~-~~~------~--------------~~~~F~~a~G~-dl~~~~-~~t~gLe~l~~~v~~  205 (244)
T 3e0r_A          152 EI-SMELHLPTDIES--FLES-SEI------G--------------ASLDFIPAQGQ-DLTVDN-TVTWDLSMLKFLVNE  205 (244)
T ss_dssp             EE-EEEEEECTTCCC--SCCH-HHH------T--------------TTEEEEECCCT-TTTCCT-TSBSSEEEEEEEESS
T ss_pred             EE-EEEEEcCchHHH--Hhhc-cCC------c--------------ccEEEEcccCC-CCCCCC-CCccCceEEEEEeCH
Confidence            37 999999999998  9986 544      1              11222222322 233332 56678888888887 


Q ss_pred             -CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           92 -NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        92 -dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                       |+.++.++|.+.|..+...    .    ..+.+.||.|+.|-+..
T Consensus       206 ~dl~~l~~~L~~~g~~idkk----~----~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          206 LDIASLRQKFESTEYFIPKS----E----KFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             CCHHHHHHHTTTSCEECCTT----C----CEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHHHHhCCceEccc----C----CEEEEECCCCCEEEEEE
Confidence             8999999999887744332    1    47899999999987754

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=96.73  E-value=0.0048  Score=48.40  Aligned_cols=61  Identities=13%  Similarity=-0.003  Sum_probs=41.6

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEee-eCCCCCCCC
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLK-SEEPDNLPK   74 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~-~~~~~~~~~   74 (195)
                      ..+.+|+||.|.|.|++++.+|| ++|||+...+.+.   ...+...+. .+..++. .....+.|.
T Consensus       154 ~~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~~~~---~~~f~~~G~-~g~~i~v~~~~r~W~p~  215 (252)
T 3pkv_A          154 DQLLSIGEINITTSDVEQAATRL-KQAELPVKLDQIE---PAGLNFIGD-QDLFLLLGPPGRRWLFS  215 (252)
T ss_dssp             GGCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGGGCC---TTSCEEEEE-TTEEEEEECSCSBCTTS
T ss_pred             HHCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccCCCC---hheEEEcCC-CcEEEEEcCCCCccccc
Confidence            35789999999999999999999 9999999876432   223324444 4544443 443444443

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=94.94  E-value=0.11  Score=34.63  Aligned_cols=56  Identities=14%  Similarity=0.138  Sum_probs=39.1

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           81 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      .++.|+++.|.|+++..+-..+ .|.++........+ +...+++.-+++ .++|....
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~-~l~l~~~~   60 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEK-NDIKLDLKLGSQ-ELEIFISD   60 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGG-TEEEEEEEETTE-EEEEEECT
T ss_pred             cccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCC-cceEEEEecCCe-EEEEEecc
Confidence            3578999999999999998876 79988654321111 223455665666 89999754

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=93.87  E-value=0.15  Score=34.29  Aligned_cols=56  Identities=11%  Similarity=0.107  Sum_probs=39.8

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           82 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ++.|+++.|.|+++..+-..+ .|.++........ .+....++. .+|..+|+.....
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~-~~~~~~~l~~~~~   61 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPE-HGVSVVFVN-LGNTKMELLHPLG   61 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGG-GTEEEEEEE-CSSSEEEEEEECS
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCC-CCEEEEEEe-cCCEEEEEEecCC
Confidence            578999999999999999987 8998875432211 122444554 4678999987543

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=93.46  E-value=0.41  Score=32.34  Aligned_cols=57  Identities=19%  Similarity=0.229  Sum_probs=40.9

Q ss_pred             CCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           81 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      .++.|+++.|+|+++..+.....|.++..........+.+..++.. +|..+|+.+..
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   62 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPD   62 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEES
T ss_pred             eeeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecC
Confidence            4689999999999999998888899886553222222334555554 67889999853

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=93.13  E-value=0.63  Score=32.09  Aligned_cols=61  Identities=13%  Similarity=0.165  Sum_probs=43.9

Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCC-----cceEEEEEECCCCCEEEEEecCC
Q 029305           79 INPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGG-----INVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        79 ~~~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~-----~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ...++.|+++.|.|+++..+-..+ .|.++.........     ......++.-++|..++|.....
T Consensus        16 ~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   82 (156)
T 3kol_A           16 NLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE   82 (156)
T ss_dssp             SSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTT
T ss_pred             ccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCC
Confidence            345799999999999999998886 79998763211000     01135677888899999998654

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=92.72  E-value=1.4  Score=29.12  Aligned_cols=58  Identities=14%  Similarity=0.155  Sum_probs=42.2

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCC
Q 029305           82 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL  140 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~  140 (195)
                      .+.|+++.|.|+++..+-..+ .|.++....... ..+...+++..++|..++|......
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~l~~~~~~   61 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENK-TKGFNSYFLSFEDGARLEIMSRTDV   61 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEG-GGTEEEEEEECSSSCEEEEEEETTC
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccC-CCCccEEEEEcCCCcEEEEEecCCC
Confidence            478999999999999988854 698876653221 1123566777778999999987543

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=91.87  E-value=1.7  Score=28.75  Aligned_cols=54  Identities=7%  Similarity=0.046  Sum_probs=39.0

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           81 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      .++.|+++.|+|+++..+-..+ .|.++........+ +...+++..+ +..++|..
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~-~~~l~l~~   58 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKR-HDYKLDLKCG-DIELEIFG   58 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTT-TEEEEEEEET-TEEEEEEE
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCC-cceEEEEecC-CeEEEEEe
Confidence            3688999999999999999876 79998765432222 2245556554 45999998

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=90.33  E-value=1.9  Score=27.91  Aligned_cols=79  Identities=11%  Similarity=0.151  Sum_probs=50.0

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccccc
Q 029305           82 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVN  160 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~~  160 (195)
                      ++.|+++.|.|+++..+-..+ .|.++....   +.   ...++..++|..+++......+   ......+...+.++-|
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~---~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~~v~~~~d   73 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GN---AFAVMRDNDGFILTLMKGKEVQ---YPKTFHVGFPQESEEQ   73 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TT---TEEEEECTTCCEEEEEECSSCC---CCTTCCEEEECSSHHH
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccC---CC---cEEEEEcCCCcEEEEEeCCCCC---CCceeEEEEEcCCHHH
Confidence            578999999999999988876 798876532   21   2456777778889988754322   1111122333323356


Q ss_pred             hhhhhhhhh
Q 029305          161 CNFHQQQIQ  169 (195)
Q Consensus       161 ~~~~~~~~~  169 (195)
                      ++...+++.
T Consensus        74 ~~~~~~~l~   82 (113)
T 1xqa_A           74 VDKINQRLK   82 (113)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            666666654

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=89.62  E-value=1.8  Score=29.56  Aligned_cols=57  Identities=21%  Similarity=0.292  Sum_probs=40.9

Q ss_pred             CCceEEEEEeCCHHHHHHHHHhCCCeEeccceecC----------CcceEEEEEECCCC-CEEEEEec
Q 029305           81 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEG----------GINVDQLFFHDPDG-SMIEICNC  137 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~----------~~~~~~~~~~DPdG-n~iEi~~~  137 (195)
                      .++.|+++.|.|+++..+-..+.|.++.......+          .......++.-++| ..|||.+.
T Consensus        10 ~~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           10 LRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             cceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            46889999999999999888778998865431111          11235677777777 79999874

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=89.58  E-value=1.8  Score=30.19  Aligned_cols=60  Identities=10%  Similarity=0.044  Sum_probs=40.3

Q ss_pred             CCCCCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecC-------------CcceEEEEEECCCCCEEEEEecC
Q 029305           78 NINPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEG-------------GINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        78 ~~~~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~-------------~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      ....++.|+++.|.|+++..+...+ .|.++........             ..+.+..++.. .+..|||.+..
T Consensus        15 ~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~leL~~~~   88 (159)
T 3gm5_A           15 LDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-GPLQLELIEPD   88 (159)
T ss_dssp             CCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-TTEEEEEEEEC
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec-CCEEEEEEEEC
Confidence            4456799999999999999998876 8988654221100             11234455543 57889999853

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=89.42  E-value=1.4  Score=31.72  Aligned_cols=59  Identities=5%  Similarity=-0.044  Sum_probs=42.5

Q ss_pred             CCCCCceEEEEEeCCHHHHHHHHH-hCCCeEeccceecCCcceEEEEEECCCC------------------CEEEEEec
Q 029305           78 NINPKDNHISFQCENMAIVERRLK-EMKIDYVKSRVEEGGINVDQLFFHDPDG------------------SMIEICNC  137 (195)
Q Consensus        78 ~~~~g~~Hiaf~v~dl~~~~~~l~-~~gv~~~~~~~~~~~~~~~~~~~~DPdG------------------n~iEi~~~  137 (195)
                      .....+.|+++.|.|+++..+-.. ..|.++........+ ....+++..+++                  ..+|+...
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  107 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIM-KFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHN  107 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTT-TEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEE
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCC-ceeEEEecCCCcccccccccchhhhcccCCceEEEEEe
Confidence            344578999999999999999885 579998765432222 335667777664                  78999764

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=87.69  E-value=2.8  Score=28.37  Aligned_cols=58  Identities=7%  Similarity=0.132  Sum_probs=42.0

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCC-----CEEEEEecCC
Q 029305           81 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDG-----SMIEICNCDV  139 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdG-----n~iEi~~~~~  139 (195)
                      .++.|+++.|.|+++..+...+ .|.++........ .+...+++..+++     ..|+|.+...
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~l~l~~~~~   71 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPE-QGVVEIMMAPAAKLTEHMTQVQVMAPLN   71 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETT-TTEEEEEEESSSSCCTTCCEEEEEEESS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCC-CCeEEEEEEcCCCCcCcceEEEEeecCC
Confidence            4689999999999999988874 7998865432111 1235677777776     8899998543

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=87.24  E-value=2.5  Score=29.65  Aligned_cols=57  Identities=18%  Similarity=0.088  Sum_probs=40.8

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           81 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      .++.|+++.|.|+++..+-..+ .|.++....... +.+.+.+++.. +|..|||++...
T Consensus         7 ~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~-g~~~l~l~~~~~   64 (161)
T 3oa4_A            7 NKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLP-SQGVKIAFLEI-GESKIELLEPLS   64 (161)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEG-GGTEEEEEEEE-TTEEEEEEEESS
T ss_pred             CcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccC-CCCeEEEEEeC-CCeEEEEEeECC
Confidence            4689999999999999999887 899886643211 11234555554 567899998543

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=85.20  E-value=6.7  Score=26.67  Aligned_cols=80  Identities=4%  Similarity=-0.076  Sum_probs=50.3

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccc
Q 029305           80 NPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTST  158 (195)
Q Consensus        80 ~~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~  158 (195)
                      ..++.|+++.|.|+++..+-..+ .|.++.... ....   ..++..+..+..+++.......     ....+...+ ..
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~-~~~~---~~~~~~~~~~~~l~l~~~~~~~-----~~~h~~~~v-~~   95 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLD-SARR---WNFLWVSGRAGMVVLQEEKENW-----QQQHFSFRV-EK   95 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEE-TTTT---EEEEEETTTTEEEEEEECCSSC-----CCCEEEEEE-CG
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEec-CCCc---EEEEEecCCCcEEEEeccCCCC-----CCceEEEEE-eH
Confidence            35789999999999999998865 799887653 1111   2333345567889998863211     111233434 33


Q ss_pred             cchhhhhhhhh
Q 029305          159 VNCNFHQQQIQ  169 (195)
Q Consensus       159 ~~~~~~~~~~~  169 (195)
                      -|++...+++.
T Consensus        96 ~dld~~~~~l~  106 (141)
T 3ghj_A           96 SEIEPLKKALE  106 (141)
T ss_dssp             GGHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            46777766654

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=84.93  E-value=2  Score=33.85  Aligned_cols=35  Identities=3%  Similarity=0.022  Sum_probs=31.4

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCC
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPG   44 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~   44 (195)
                      ...+|.+|.+.+.|.+++.+.|+++||++.....+
T Consensus       187 Ga~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~~  221 (274)
T 3p8a_A          187 KQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEND  221 (274)
T ss_dssp             TTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEECS
T ss_pred             ccceEEEEEEEeCCHHHHHHHHHHHhCCCccccCC
Confidence            35789999999999999999999999999987654

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=84.88  E-value=2  Score=29.20  Aligned_cols=82  Identities=11%  Similarity=0.082  Sum_probs=46.0

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCc-ceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhccccccc
Q 029305           82 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGI-NVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTV  159 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~-~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~  159 (195)
                      ++.|+.+.|.|+++..+-..+ .|.++..... ...+ .....++. .+|..+++......+   ......+...+ ..-
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-~~~~~~~~~~~~~-~g~~~l~l~~~~~~~---~~~~~h~~~~v-~~~   77 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASD-TEQFSLSREKFFL-IGDIWVAIMQGEKLA---ERSYNHIAFKI-DDA   77 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGG-GSTTCCSCEEEEE-ETTEEEEEEECCCCS---SCCSCEEEEEC-CGG
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCC-CccccccceEEEE-ECCEEEEEEeCCCCC---CCCeeEEEEEc-CHH
Confidence            478999999999999988865 7998765431 1111 00111333 257789988754322   11111233333 113


Q ss_pred             chhhhhhhhh
Q 029305          160 NCNFHQQQIQ  169 (195)
Q Consensus       160 ~~~~~~~~~~  169 (195)
                      |++...+++.
T Consensus        78 d~~~~~~~l~   87 (139)
T 1r9c_A           78 DFDRYAERVG   87 (139)
T ss_dssp             GHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            6666666654

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=84.61  E-value=6.4  Score=26.25  Aligned_cols=84  Identities=10%  Similarity=-0.041  Sum_probs=49.3

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcccccc
Q 029305           80 NPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTST  158 (195)
Q Consensus        80 ~~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~  158 (195)
                      ..++.|+.+.|.|+++..+--.+ .|.++....   ..    .+.+...+|..+.|.........+......+...+.+.
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~---~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~v~~~   83 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVT---PR----YVAFPSSGDALFAIWSGGEEPVAEIPRFSEIGIMLPTG   83 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEEC---SS----EEEEECSTTCEEEEESSSCCCCTTSCCCEEEEEEESSH
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcC---CC----EEEEEcCCCcEEEEEeCCCCCcCCCCCcceEEEEeCCH
Confidence            35789999999999998887765 687765432   12    33466677889999875421111111111133333122


Q ss_pred             cchhhhhhhhhh
Q 029305          159 VNCNFHQQQIQQ  170 (195)
Q Consensus       159 ~~~~~~~~~~~~  170 (195)
                      -|+++..+++..
T Consensus        84 ~dv~~~~~~l~~   95 (132)
T 3sk2_A           84 EDVDKLFNEWTK   95 (132)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            347777666554

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=83.04  E-value=7.8  Score=25.51  Aligned_cols=56  Identities=7%  Similarity=0.029  Sum_probs=39.5

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCC---CCEEEEEecC
Q 029305           82 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPD---GSMIEICNCD  138 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPd---Gn~iEi~~~~  138 (195)
                      ++.|+++.|.|+++..+-..+ .|.++........+ ....+++.-++   |..+++....
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~   61 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEY-KYSLAFVGYGPETEEAVIELTYNW   61 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTT-TEEEEEEESSCTTTSCEEEEEEET
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCC-ceEEEEEecCCCCCCcEEEEEEcC
Confidence            468999999999999998876 79988765422222 12345565554   7899998743

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=82.75  E-value=7.8  Score=25.86  Aligned_cols=55  Identities=15%  Similarity=0.146  Sum_probs=37.9

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           82 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ++.|+++.|.|+++..+-..+ .|.++........+ ....+++ . +|..++|.....
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~-~-~~~~l~l~~~~~   60 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTT-SFAHGVL-P-GGLSIVLREHDG   60 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSE-EEEEEEC-T-TSCEEEEEEETT
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCC-ceEEEEE-c-CCCEEEEEeCCC
Confidence            478999999999999988865 79988654321111 1123334 4 788999998643

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=82.68  E-value=11  Score=26.80  Aligned_cols=58  Identities=5%  Similarity=-0.035  Sum_probs=40.4

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCC------------------CCEEEEEecC
Q 029305           80 NPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPD------------------GSMIEICNCD  138 (195)
Q Consensus        80 ~~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPd------------------Gn~iEi~~~~  138 (195)
                      ..++.|+++.|.|+++..+-..+ .|.++.......++ ....+++..++                  |..|||.+..
T Consensus        29 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~  105 (184)
T 2za0_A           29 DFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAM-KFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNW  105 (184)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGG-TEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEET
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCC-CceeEEecccccccCCcccchheeeecCCCceEEEEecC
Confidence            45789999999999999998876 79988754322221 22345555543                  6799998753

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=82.39  E-value=8.4  Score=35.74  Aligned_cols=52  Identities=15%  Similarity=0.277  Sum_probs=38.0

Q ss_pred             ceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           83 DNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        83 ~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ...+.|.+.|+..+.+.|.+..++  ..+.   ..+-..+|..||=||.|-+....+
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~dp~~~~~~~~~~~~  175 (989)
T 3opy_A          124 PGEVTFFTASIDKLKAKLIEIGAE--IIPS---KIDLVEFSTRDPMGDVISFSSYPS  175 (989)
T ss_dssp             SCEEEEECSCHHHHHHHHHHSSCC--BCCC---C--CCCEEEESSSEEEEECCSSSC
T ss_pred             cceEEEEeCcHHHHHHHhhhcccc--cCCC---CCCceeEEEecCCCCEEeeecCCC
Confidence            356899999999999999887333  2221   112247899999999999988654

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=82.30  E-value=6.7  Score=27.10  Aligned_cols=52  Identities=17%  Similarity=0.151  Sum_probs=37.5

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           81 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      .++.|+.+.|.|+++..+--.+ .|.++....   .+    ..++.-++|..+++.....
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~----~~~~~~~~g~~l~l~~~~~   57 (148)
T 3rhe_A            5 SDPNLVLFYVKNPAKSEEFYKNLLDTQPIESS---PT----FAMFVMKTGLRLGLWAQEE   57 (148)
T ss_dssp             --CEEEEEEESCHHHHHHHHHHHHTCCCSEEC---SS----EEEEECTTSCEEEEEEGGG
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHcCCEEeccC---CC----EEEEEcCCCcEEEEecCCc
Confidence            3588999999999999887765 688765432   22    4466667899999987643

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=81.60  E-value=2.1  Score=28.40  Aligned_cols=50  Identities=8%  Similarity=0.170  Sum_probs=36.5

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           81 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      .++.|+++.|.|+++..+-..+ .|.++....   .+    .+++.- +|..+++....
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~~----~~~~~~-~~~~~~l~~~~   59 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---AG----RIALEF-GHQKINLHQLG   59 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---TT----EEEEEE-TTEEEEEEETT
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEEec---CC----eEEEEc-CCEEEEEEcCC
Confidence            4689999999999999998886 799887643   22    223332 46788888754

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=81.25  E-value=5.7  Score=32.27  Aligned_cols=52  Identities=12%  Similarity=0.095  Sum_probs=37.9

Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecC-Cc--------ceEEEEEECCCCC
Q 029305           79 INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEG-GI--------NVDQLFFHDPDGS  130 (195)
Q Consensus        79 ~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~-~~--------~~~~~~~~DPdGn  130 (195)
                      .++.++|+..+|.|++++.+.|+++|++......... +.        -...+.|.|.+|.
T Consensus       232 ~G~~iNHlT~rv~DId~v~~~m~~~G~~~k~~IeGsP~~lLrQTSf~A~~e~v~F~d~~G~  292 (340)
T 3iuz_A          232 EGNAFNHATDRVDDVFGLSEQQXALGRPMXDXVEVSGSGRVXQTAFRADTVRRQFIGAQGE  292 (340)
T ss_dssp             HTTSCSEEEEECSCHHHHHHHHHHTTCCBCSCCEECTTSSEEEEEBCCCEEEEEEECTTSC
T ss_pred             cCCccccccCCcCCHHHHHHHHHHcCCChhhhhcCCcccceeeeeccccceEEEEecCCCc
Confidence            3557899999999999999999999998765432111 11        2356788888874

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=80.18  E-value=11  Score=25.24  Aligned_cols=51  Identities=8%  Similarity=0.008  Sum_probs=37.4

Q ss_pred             CceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           82 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      ++.|+.+.|.|+++..+-..+.|.++.... +...    .+.+.-++|..+++...
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~-~~~~----~~~~~~~~~~~l~l~~~   54 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEA-DSAP----HTEAVLDGGIRLAWDTV   54 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGG-GGCS----EEEEECTTSCEEEEEEH
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecC-CCCc----eEEEEcCCCeEEEEecC
Confidence            578999999999999988877898876543 1111    33444467889999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	195
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	1e-17
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-16
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-16
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	3e-16
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	4e-14
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	5e-14
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	2e-13
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	5e-13
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	1e-12
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	1e-12
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	2e-12
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	4e-12
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	1e-11
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	2e-11
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	8e-10
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	2e-09
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	6e-09
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	1e-08
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	1e-08
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	2e-08
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	2e-08
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	4e-08
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	5e-08
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	7e-08
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	4e-07
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	2e-05
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	3e-05
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	5e-05
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	9e-05
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	1e-04
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	2e-04
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	4e-04
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	0.002
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	0.002

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 73.0 bits (178), Expect = 1e-17
 Identities = 18/124 (14%), Positives = 43/124 (34%), Gaps = 6/124 (4%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           ++ L+H++ + R +E      + V     +    +  F  +   F     I +   +   
Sbjct: 2   IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEK 61

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS 130
              ++  +I            +      R+ ++ +D    R    G     ++F+D D  
Sbjct: 62  LAERSYNHI-----AFKIDDADFDRYAERVGKLGLDMRPPRPRVEG-EGRSIYFYDDDNH 115

Query: 131 MIEI 134
           M E+
Sbjct: 116 MFEL 119

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 70.1 bits (170), Expect = 2e-16
 Identities = 27/122 (22%), Positives = 45/122 (36%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLP 73
           L H  L    ++ S+DFY  VLG   +R   + ++  +     YG        E   N  
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 74  KAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIE 133
                +     HI+   +N A    ++++   +  +      G      F  DPDG  IE
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 122

Query: 134 IC 135
           + 
Sbjct: 123 LI 124

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (172), Expect = 3e-16
 Identities = 30/154 (19%), Positives = 50/154 (32%), Gaps = 26/154 (16%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEE----- 68
           L    L  +  + SLDFY  VLG   I++        +     Y     + K ++     
Sbjct: 24  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 83

Query: 69  ----------------PDNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVK 109
                            D+  ++  N N            +  V     R +E+ + +VK
Sbjct: 84  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 143

Query: 110 SRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVV 143
              +         F  DPDG  IEI N + +  +
Sbjct: 144 KPDDGKM--KGLAFIQDPDGYWIEILNPNKMATL 175

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 70.0 bits (170), Expect = 3e-16
 Identities = 25/136 (18%), Positives = 43/136 (31%), Gaps = 2/136 (1%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIH--LLKSEE 68
           +K  +HIS+V ++   +  FY+NVLG   ++   + D      LF            S  
Sbjct: 4   IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFF 63

Query: 69  PDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPD 128
              L             I     +   +    +  +   VK        N   L F D +
Sbjct: 64  EIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAE 123

Query: 129 GSMIEICNCDVLPVVP 144
           G  + +   +   V  
Sbjct: 124 GLRLVLLVSNGEKVEH 139

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 65.0 bits (157), Expect = 4e-14
 Identities = 15/121 (12%), Positives = 36/121 (29%), Gaps = 5/121 (4%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLP 73
            +H  +    + A+ D +  VLGF+   +    +     +  +     H +         
Sbjct: 6   FDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPEKG 65

Query: 74  KAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIE 133
           +         +      E++      +              G  +   ++F DP G+  E
Sbjct: 66  RLHHV-----SFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNE 120

Query: 134 I 134
           +
Sbjct: 121 V 121

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 63.7 bits (154), Expect = 5e-14
 Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 14/124 (11%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           L  LNH++L    + AS+ FY+++LGF    R           L    + + L +  +  
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQG-----AYLELGSLWLCLSREPQYG 56

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS 130
                  +             + A    +L+   +   K    EG    D  +F DPDG 
Sbjct: 57  GPAADYTH-----YAFGIAAADFARFAAQLRAHGVREWKQNRSEG----DSFYFLDPDGH 107

Query: 131 MIEI 134
            +E 
Sbjct: 108 RLEA 111

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 62.6 bits (151), Expect = 2e-13
 Identities = 19/123 (15%), Positives = 34/123 (27%), Gaps = 2/123 (1%)

Query: 16  HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKA 75
            I+     ++  + FY+  L    I      +              HL  ++        
Sbjct: 12  RIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTAP 71

Query: 76  GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 135
             + +            +A +  +LK M    V+S           +   DPDG  I   
Sbjct: 72  VPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNG--GVTIEDPDGWRIVFM 129

Query: 136 NCD 138
           N  
Sbjct: 130 NSK 132

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 62.2 bits (150), Expect = 5e-13
 Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 15/139 (10%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           L  L+H + V   V     + +  LGF         D        +    +H       +
Sbjct: 3   LVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN 61

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE-----GGINVDQLFFH 125
                     P+ +H++F       + +   +M    +  R+E      G  N   L+  
Sbjct: 62  G---------PRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYIL 112

Query: 126 DPDGSMIEICNCDVLPVVP 144
           DPDG  IEI   D     P
Sbjct: 113 DPDGHRIEIYTQDYYTGDP 131

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 60.4 bits (145), Expect = 1e-12
 Identities = 20/121 (16%), Positives = 36/121 (29%), Gaps = 9/121 (7%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLP 73
             H+ L    +  +L+ Y  +LG   + R    D  G   L  +              L 
Sbjct: 8   PGHVQLRVLDMSKALEHYVELLGLIEMDR----DDQGRVYLKAWTEVDK-----FSLVLR 58

Query: 74  KAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIE 133
           +A +             + +  +ER L        +    E      ++ F  P G   E
Sbjct: 59  EADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFE 118

Query: 134 I 134
           +
Sbjct: 119 L 119

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 60.5 bits (145), Expect = 1e-12
 Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 5/125 (4%)

Query: 12  KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDN 71
           + + H  +    ++ S+ FY   LG   +R+    +         YG  +     E   N
Sbjct: 2   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 61

Query: 72  LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSM 131
                   +    HI+   E++  +   +++  +      ++    +    F  DPDG  
Sbjct: 62  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDV-----PIDYEDESGFMAFVVDPDGYY 116

Query: 132 IEICN 136
           IE+ N
Sbjct: 117 IELLN 121

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 60.0 bits (144), Expect = 2e-12
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 11/124 (8%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           L+SLNH++L    ++ S+ F+  +LG     R  +  +            + +  S +  
Sbjct: 2   LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGD-------LWVCLSYDEA 54

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS 130
                 +  +      +   E+   + +RL++  +   K    EG       +F DPDG 
Sbjct: 55  RQYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEG----ASFYFLDPDGH 110

Query: 131 MIEI 134
            +E+
Sbjct: 111 KLEL 114

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 59.2 bits (142), Expect = 4e-12
 Identities = 21/137 (15%), Positives = 50/137 (36%), Gaps = 12/137 (8%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS-------FDFDGACRLFNYGMGIHL 63
              ++H++  C   + +  +YQ   G+  + R  +            A +L  +   + +
Sbjct: 5   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 64

Query: 64  L---KSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 120
           +     E       A  N     +H++++ +++  V   L+E  +  +    + G     
Sbjct: 65  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 124

Query: 121 QLFFH--DPDGSMIEIC 135
             F H     G +IE+ 
Sbjct: 125 INFMHPKSGKGVLIELT 141

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 58.6 bits (141), Expect = 1e-11
 Identities = 15/125 (12%), Positives = 41/125 (32%), Gaps = 6/125 (4%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           ++ +  + L  R ++        + G+  + R      +   +         ++      
Sbjct: 10  IQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND---QEAIFQSIKGEAFGEIVVKYLD- 65

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS 130
                 K      +H++ + +N A +    +++K     S           L+F + +G 
Sbjct: 66  --GPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGI 123

Query: 131 MIEIC 135
           + EI 
Sbjct: 124 LFEIA 128

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 57.4 bits (137), Expect = 2e-11
 Identities = 18/141 (12%), Positives = 45/141 (31%), Gaps = 18/141 (12%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRR--------------PGSFDFDGACRLFN 56
           L  ++++S+V  S++ ++ F++  +G     R                           +
Sbjct: 7   LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD 65

Query: 57  YGMGIHLLKSEEPDNLPKAGKNINPKD--NHISFQCENMAIVERRLKEMKIDYVKSRVEE 114
               I L +   P  +               + F  E++  +  RL +   + V   V+ 
Sbjct: 66  GHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQY 125

Query: 115 GGINVDQLFFHDPDGSMIEIC 135
              +    +    +G +I + 
Sbjct: 126 EN-SYRLCYIRGVEGILIGLA 145

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 52.1 bits (124), Expect = 8e-10
 Identities = 15/122 (12%), Positives = 37/122 (30%), Gaps = 12/122 (9%)

Query: 13  SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNL 72
           +LN + ++  +V       +++L          F      +       + L ++      
Sbjct: 2   NLNQLDIIVSNVPQVCADLEHILDKKADYANDGF-----AQFTIGSHCLMLSQNHLVPLE 56

Query: 73  PKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMI 132
                        I  + E++    +RL E+ I  +           + L    P G ++
Sbjct: 57  NFQS------GIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAGLVL 109

Query: 133 EI 134
           + 
Sbjct: 110 DF 111

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 51.5 bits (122), Expect = 2e-09
 Identities = 18/128 (14%), Positives = 32/128 (25%), Gaps = 20/128 (15%)

Query: 12  KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDN 71
           +SL ++      V A   F    LG            D             +   +    
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTT-----DNGDLFRIDSRAWRIAVQQGE-- 55

Query: 72  LPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGI--NVDQLFFHD 126
                           ++  + A + +   +LK+  I                  + F D
Sbjct: 56  --------VDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFAD 107

Query: 127 PDGSMIEI 134
           P G  +EI
Sbjct: 108 PFGLPLEI 115

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 50.4 bits (119), Expect = 6e-09
 Identities = 17/129 (13%), Positives = 37/129 (28%), Gaps = 20/129 (15%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           ++ L ++    + V A   F    +G       G                     + +P 
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG-------DAALYRADQRAWRIAVQPG 54

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ-----LFFH 125
                         +   + ++ A +ER   +++   V     +  +   +     L   
Sbjct: 55  E--------LDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQ 106

Query: 126 DPDGSMIEI 134
           DP G  +EI
Sbjct: 107 DPFGLPLEI 115

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 49.6 bits (117), Expect = 1e-08
 Identities = 19/136 (13%), Positives = 38/136 (27%), Gaps = 11/136 (8%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPD 70
           +    ++ +V   +  S +FY +VLG          +      L  +     +L+     
Sbjct: 14  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE--NTIYLRSLEEFIHHNLVLRQGPIA 71

Query: 71  NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS 130
            +            +       +   E   KE+     + +        D +   DP G 
Sbjct: 72  AVAAFA--------YRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGF 123

Query: 131 MIEICNCDVLPVVPLA 146
             E    +   V  L 
Sbjct: 124 PYEFF-YETEHVERLT 138

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 49.8 bits (118), Expect = 1e-08
 Identities = 14/140 (10%), Positives = 37/140 (26%), Gaps = 10/140 (7%)

Query: 7   NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPI--RRPGSFDFDGACRLFNYGMGIHLL 64
           +P  +K ++ +     + + +  +Y    G   +    P +   + A  +   G    +L
Sbjct: 1   DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVL 60

Query: 65  KSEEPDNLPKAGKNINPKDN------HISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 118
            S      P      +           ++ +  +         E     V    E    +
Sbjct: 61  TSVIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEH 120

Query: 119 --VDQLFFHDPDGSMIEICN 136
             V          +   + +
Sbjct: 121 GTVVLAAIATYGKTRHTLVD 140

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 49.0 bits (115), Expect = 2e-08
 Identities = 18/127 (14%), Positives = 43/127 (33%), Gaps = 10/127 (7%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLP 73
           ++  ++V   +  S++FY+  +G                       GI L          
Sbjct: 3   ISLFAVVVEDMAKSMEFYR-KMGVEIPAEA----DSAPHTEAVLDGGIRLAWDTVETVRS 57

Query: 74  KAGKNINPKDN---HISFQCENMAIVERRLKEMKIDYVKSRVE--EGGINVDQLFFHDPD 128
              +   P       I+F+  + A V+++  E+     +  ++              DPD
Sbjct: 58  YDPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPD 117

Query: 129 GSMIEIC 135
           G+++++ 
Sbjct: 118 GNVVDLF 124

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 48.1 bits (113), Expect = 2e-08
 Identities = 19/119 (15%), Positives = 35/119 (29%), Gaps = 13/119 (10%)

Query: 16  HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKA 75
             ++       +  FY ++LG                          +  + E  +    
Sbjct: 5   VANIATPEPARAQAFYGDILGM----PVAMDHGWIVTHASPLEAHAQVSFAREGGS---- 56

Query: 76  GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 134
                     +S + +N   V  R+ +  +      V E    V +LF  DP G +I I
Sbjct: 57  ----GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINI 110

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 48.2 bits (114), Expect = 4e-08
 Identities = 13/133 (9%), Positives = 26/133 (19%), Gaps = 7/133 (5%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLP 73
           + H          ++ FY  VLGF                  ++        +      P
Sbjct: 11  IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFP 70

Query: 74  KAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSR--VEEGGINVDQLFFHDPDGSM 131
                   + +H   Q   +  V      +      +              +   P   +
Sbjct: 71  IP-----KRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMI 125

Query: 132 IEICNCDVLPVVP 144
                     V  
Sbjct: 126 EVEFGWGPRTVDS 138

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 47.3 bits (111), Expect = 5e-08
 Identities = 16/116 (13%), Positives = 37/116 (31%), Gaps = 8/116 (6%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKN 78
           L  R V  +++F+ + LGF  +     F  D    +    + + +   ++          
Sbjct: 10  LTARDVAEAVEFWTDRLGFSRV-----FVEDDFAGVVRDDVTLFISAVQDQVVPDNTQAW 64

Query: 79  INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 134
           +           E   +V    ++     +   VE+      +    DP G+ +  
Sbjct: 65  VWV-RGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGR--EFALRDPAGNCVHF 117

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 47.1 bits (110), Expect = 7e-08
 Identities = 12/121 (9%), Positives = 30/121 (24%), Gaps = 13/121 (10%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLP 73
           + H++L    V A+ +F +   G                          +  ++      
Sbjct: 4   IKHLNLTVADVVAAREFLEKYFGLTCSGT-------------RGNAFAVMRDNDGFILTL 50

Query: 74  KAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIE 133
             GK +           +       ++ +   +           +    +   P G  IE
Sbjct: 51  MKGKEVQYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIE 110

Query: 134 I 134
           +
Sbjct: 111 V 111

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 44.7 bits (104), Expect = 4e-07
 Identities = 17/120 (14%), Positives = 35/120 (29%), Gaps = 8/120 (6%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKN 78
           L    V A++ F+ + LGF        F       +    + +H+ ++E           
Sbjct: 11  LTAVDVPANVSFWVDTLGFEKDFGDRDF-----AGVRRGDIRLHISRTEHQIVADNTSAW 65

Query: 79  INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD 138
           I   D     +    A+      +     +    E       +    DP G+ +     +
Sbjct: 66  IEVTDPDALHEEWARAVST-DYADTSGPAMTPVGESPAGR--EFAVRDPAGNCVHFTAGE 122

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 40.4 bits (94), Expect = 2e-05
 Identities = 23/145 (15%), Positives = 44/145 (30%), Gaps = 13/145 (8%)

Query: 6   ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLK 65
           ENP+ L     I     +       ++  +GF  +    S +      L+  G    +L 
Sbjct: 2   ENPMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSKNVH----LYRQGEINLILN 56

Query: 66  SEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEG--------GI 117
           +E             P    ++F+ ++      R  E+    +               GI
Sbjct: 57  NEPNSIASYFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGI 116

Query: 118 NVDQLFFHDPDGSMIEICNCDVLPV 142
               L+  D  G    I + D + +
Sbjct: 117 GGAPLYLIDRFGEGSSIYDIDFVYL 141

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 41.3 bits (96), Expect = 3e-05
 Identities = 12/105 (11%), Positives = 31/105 (29%), Gaps = 13/105 (12%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGA-----CRLFNYGMG-IHLL 64
           L   +HI      +  +  ++    GF       + D   A       +       + L 
Sbjct: 7   LSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLP 66

Query: 65  KSEEPDNLPKAGKNINPKDN-------HISFQCENMAIVERRLKE 102
            +E      +  +     D+       H++   +++    R ++ 
Sbjct: 67  LNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQA 111

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 39.2 bits (90), Expect = 5e-05
 Identities = 16/117 (13%), Positives = 32/117 (27%), Gaps = 8/117 (6%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKN 78
           L  R  +++  FY+  LGF  + R   +       L                        
Sbjct: 8   LPSRDFDSTAAFYER-LGFGIVFRDAGWMILQRGDLMLEFFAHP----GLDPLASWFSCC 62

Query: 79  INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 135
           +   D    ++      ++         +       GG         DPDG+++ + 
Sbjct: 63  LRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGG---TMAALVDPDGTLLRLI 116

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 39.1 bits (90), Expect = 9e-05
 Identities = 11/113 (9%), Positives = 25/113 (22%), Gaps = 17/113 (15%)

Query: 7   NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG------ 60
           +     + +H+ L C    ++   +   LG     R      + A        G      
Sbjct: 7   DRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLF 66

Query: 61  -----------IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKE 102
                         L S       +   +       ++ +  +     R    
Sbjct: 67  TAPYAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVA 119

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 15/108 (13%), Positives = 39/108 (36%), Gaps = 10/108 (9%)

Query: 11  LKSLNHISLVCR--SVEASLDFYQNVLGF-----FPIRRPGSFDFDGACRLFNYGMGIHL 63
           LK ++H++       +    +FY+ +  F     F I+   +     A    +  + I L
Sbjct: 3   LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPL 62

Query: 64  LKSEEPDNLPKA---GKNINPKDNHISFQCENMAIVERRLKEMKIDYV 108
            +              +       H++F  +++      LK++ + ++
Sbjct: 63  NEESSKGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFM 110

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 2e-04
 Identities = 18/133 (13%), Positives = 44/133 (33%), Gaps = 7/133 (5%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD--FDGACRLFNYGMGIHLLKSEE 68
               + ++    + + +  FY N +GF P+   G      +    +   G  + +L S  
Sbjct: 9   FLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSAL 68

Query: 69  PDNLPKAGKNINPKDN---HISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN--VDQLF 123
                + G ++    +    I+F+ E+   + ++ +E     V+    E      V    
Sbjct: 69  NPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAV 128

Query: 124 FHDPDGSMIEICN 136
                 +   +  
Sbjct: 129 LQTYGDTTHTLVE 141

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.1 bits (85), Expect = 4e-04
 Identities = 12/138 (8%), Positives = 26/138 (18%), Gaps = 23/138 (16%)

Query: 2   KESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGI 61
           K    +   +K  +HI   C         +   LG     +      +     +    G 
Sbjct: 1   KNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGD 60

Query: 62  HLLKSEEPDNLPKAGKNINPKDN-----------------------HISFQCENMAIVER 98
                  P +   +   I P                           ++ + E+      
Sbjct: 61  LRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFS 120

Query: 99  RLKEMKIDYVKSRVEEGG 116
                        +    
Sbjct: 121 ISVANGAIPSSPPIVLNE 138

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 35.9 bits (82), Expect = 0.002
 Identities = 14/114 (12%), Positives = 33/114 (28%), Gaps = 13/114 (11%)

Query: 2   KESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDG------ACRLF 55
             S      ++ L+H       +  +L +     GF       + D         +  L 
Sbjct: 11  ASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLA 70

Query: 56  NYGMGIHLLKSEEPDNLPKAG-------KNINPKDNHISFQCENMAIVERRLKE 102
           +    + L  +E      +          N      H++   E++    R +++
Sbjct: 71  SNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRK 124

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 27/154 (17%), Positives = 52/154 (33%), Gaps = 30/154 (19%)

Query: 11  LKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGSFDFDGA-CRLFNYGMGIHLLKSE 67
            ++++H         +   + FY  V+GF  ++     D       L +  +    LK +
Sbjct: 4   FQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVK 63

Query: 68  EPDNLPKAGKNINPKD-----------NHISFQCENMAIVERRLKEMKI----------D 106
            P N P   K  +  D            HI+    ++    R ++   +          D
Sbjct: 64  FPINEPALAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYD 123

Query: 107 YVKSRVEEGGINVDQLFFH------DPDGSMIEI 134
            +   V +  + VD L         D DG +++I
Sbjct: 124 TLGEWVGDTRVPVDTLRELKILADRDEDGYLLQI 157

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	195
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.89
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.86
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.85
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.85
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.84
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.84
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.84
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.84
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.84
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.83
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.82
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.82
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.81
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.8
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.8
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.79
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.79
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.78
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.78
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.75
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.75
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.74
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.73
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.71
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.7
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.69
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.68
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.65
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.62
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.53
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.52
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.1
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.04
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.02
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	98.95
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.95
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.84
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.48
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.04
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	96.56
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	96.14
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	95.84
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	95.59
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	95.37
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	95.21
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	94.7
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	92.71
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	91.2
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	90.9
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	90.29
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	89.17
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	89.06
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	88.96
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	87.66

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.89  E-value=8.7e-23  Score=147.08  Aligned_cols=133  Identities=18%  Similarity=0.183  Sum_probs=91.6

Q ss_pred             CcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEE-EeecC---cEEEEeeeCCCCCCCCCCCCCCCCc
Q 029305            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACR-LFNYG---MGIHLLKSEEPDNLPKAGKNINPKD   83 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~g---~~~~ll~~~~~~~~~~~~~~~~~g~   83 (195)
                      |..|++|+||+|.|+|+++|.+||+++|||++..+....+....+. .+..+   ....+.....+...+.  ....+++
T Consensus         1 m~~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~   78 (144)
T d1zswa1           1 MYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRT--YRGTNAI   78 (144)
T ss_dssp             SSCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBC--BCCBSEE
T ss_pred             CCcccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCC--ccCCCce
Confidence            4578999999999999999999999999999987654332222221 22221   1122222222211111  1334568


Q ss_pred             eEEEEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCC
Q 029305           84 NHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPL  145 (195)
Q Consensus        84 ~Hiaf~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~  145 (195)
                      .|+||.|++   ++++.++|++.|+.+.... ..+  +.+++||+|||||.|||+++...+..|+
T Consensus        79 ~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~-~~~--~~~~~yf~DPdG~~iEl~~~~~~~~~~w  140 (144)
T d1zswa1          79 TRIGLLVPSEDSLHYWKERFEKFDVKHSEMT-TYA--NRPALQFEDAEGLRLVLLVSNGEKVEHW  140 (144)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHTTCEECCSE-EET--TEEEEEEECTTCCEEEEEECTTCCCTTC
T ss_pred             eEEEEecCCchhHHHHhhhhhccceeeeCcc-ccC--CeEEEEEECCCCCEEEEEEeCCCCCCCC
Confidence            999999997   7788999999999875543 222  4589999999999999999876555544

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.86  E-value=1.5e-21  Score=145.09  Aligned_cols=124  Identities=16%  Similarity=0.246  Sum_probs=87.9

Q ss_pred             CCCCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-c-EEEEeeeCCCCCCCCCCCCCCCC
Q 029305            5 VENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-M-GIHLLKSEEPDNLPKAGKNINPK   82 (195)
Q Consensus         5 ~~~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~-~~~ll~~~~~~~~~~~~~~~~~g   82 (195)
                      ++....|++|+||.|.|+|++++.+||+++|||++..+.+..   ..+ ....+ . ...++.....   +.. ....++
T Consensus         4 vp~~~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~---~~~-~~~~~~   75 (170)
T d1zswa2           4 VPAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQE---AIF-QSIKGEAFGEIVVKYLDG---PTE-KPGRGS   75 (170)
T ss_dssp             SCGGGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSSE---EEE-ESSTTCSTTCEEEEECCS---SBC-BCCBTC
T ss_pred             CChhHHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCce---EEE-EeccCccceEEEeccccc---ccc-ccCccc
Confidence            444457899999999999999999999999999999886531   223 22222 1 1222222211   111 133457


Q ss_pred             ceEEEEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           83 DNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        83 ~~Hiaf~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ++|+||.|+|   ++++.++|.+.|+++.... .. + +.+++||+|||||.|||++..+
T Consensus        76 l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~~~-~~-~-~~~s~Yf~DPdG~~iEl~t~~p  132 (170)
T d1zswa2          76 IHHLAIRVKNDAELAYWEEQVKQRGFHSSGII-DR-F-YFKSLYFRESNGILFEIATDGP  132 (170)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCCCCCE-EC-S-SEEEEEEECTTCCEEEEEEEEE
T ss_pred             cceEEEEeCChHHHHHHHHHHHhcCCCccccc-cC-C-CEEEEEEECCCCcEEEEEECCC
Confidence            8999999985   7788899999999975433 22 2 3589999999999999999754

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.85  E-value=1.2e-20  Score=135.86  Aligned_cols=126  Identities=14%  Similarity=0.217  Sum_probs=90.1

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCC--------CC---ccEEEeec---CcEEEEeeeCCCCCCCC-
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD--------FD---GACRLFNY---GMGIHLLKSEEPDNLPK-   74 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~--------~~---~~~~~~~~---g~~~~ll~~~~~~~~~~-   74 (195)
                      .+++|+||+|.|+|+++|.+||++ |||++..+.....        .+   .....+..   ...+++++......... 
T Consensus         6 ~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~   84 (149)
T d1ss4a_           6 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADH   84 (149)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBC
T ss_pred             CCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcccc
Confidence            468899999999999999999999 9999887532110        00   01112221   24566665433222211 


Q ss_pred             -CCCCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           75 -AGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        75 -~~~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                       .......|..|+||.|+|+++++++|++.|+++..++....+ +.+.+|++|||||.|||++.
T Consensus        85 ~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          85 RTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             cccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence             111345678999999999999999999999999877755433 55889999999999999984

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.85  E-value=4.6e-21  Score=135.47  Aligned_cols=117  Identities=16%  Similarity=0.299  Sum_probs=83.9

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCC---CccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF---DGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~---~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      |+++|+||+|.|+|++++.+||+++|||++..+.+....   ...+ +...+..+.+.....         ....+..|+
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~   70 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKF-FLIGDIWVAIMQGEK---------LAERSYNHI   70 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEE-EEETTEEEEEEECCC---------CSSCCSCEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEE-EecCCEEEeeccccc---------ccccceeee
Confidence            568899999999999999999999999999886543221   1122 222233344433221         223467899


Q ss_pred             EEEeC--CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           87 SFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        87 af~v~--dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +|.++  ++++++++|+++|+++...+.... ++.+.+||.|||||.|||++.
T Consensus        71 ~f~v~~~dv~~~~~~l~~~gv~i~~~~~~~~-~~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          71 AFKIDDADFDRYAERVGKLGLDMRPPRPRVE-GEGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             eecccHHHHHHHHHHHHHCCCeEecCCcccC-CCEEEEEEECCCCCEEEEEEC
Confidence            99887  899999999999999876653332 244789999999999999874

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=4.2e-21  Score=135.30  Aligned_cols=126  Identities=20%  Similarity=0.256  Sum_probs=86.8

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC--cEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g--~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      ++|+|+.|.|+|+++|.+||+++|||++..+.........+.....+  ........... ..... .....+..|+++.
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~   78 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYN-WGVDK-YELGTAYGHIALS   78 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEE-TTCCC-CCCCSSEEEEEEE
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccc-ccccc-ccccccceeeccc
Confidence            46889999999999999999999999998764322222222122221  11111111100 01111 1445678999999


Q ss_pred             eCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           90 CENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        90 v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +++++.+.++++++|..+...+......+.+.+||+|||||.|||++...
T Consensus        79 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~  128 (135)
T d1f9za_          79 VDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             CSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             hHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCC
Confidence            99999999999999999988775555446688999999999999999654

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.84  E-value=2.2e-20  Score=133.77  Aligned_cols=114  Identities=23%  Similarity=0.417  Sum_probs=86.6

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      |+++|+||+|.|+|++++++||+++|||++..+.+.     .+ .+..+ ..+.+.........+    ....+..|++|
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~-----~~-~~~~~~~~~~l~~~~~~~~~~----~~~~~~~h~~~   70 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT-----GA-YLTCGDLWVCLSYDEARQYVP----PQESDYTHYAF   70 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT-----EE-EEEETTEEEEEEECTTCCCCC----GGGSCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc-----cc-ccccccccceeecccccccCC----CcCCccceeee
Confidence            578999999999999999999999999999877542     22 33333 444444433221111    44567789999


Q ss_pred             EeC--CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           89 QCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        89 ~v~--dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      .++  |++++.++|+++|+++...+. .   +.+.+||+|||||.|||+..
T Consensus        71 ~~~~~d~~~~~~~l~~~Gv~~~~~~~-~---~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          71 TVAEEDFEPLSQRLEQAGVTIWKQNK-S---EGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             ECCHHHHHHHHHHHHHTTCCEEECCC-S---SSEEEEEECTTCCEEEEEEC
T ss_pred             echHHHHHHHHHHHHHCCCeEeecCC-C---CceEEEEECCCCCEEEEEEC
Confidence            986  899999999999999876552 2   34789999999999999874

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.84  E-value=1.5e-20  Score=129.50  Aligned_cols=106  Identities=22%  Similarity=0.344  Sum_probs=79.7

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC--cEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g--~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      ++|+||.|.|+|++++++||+++|||++..+.+.    ..+ +...+  ..+.+.....         ...++..|++|.
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~h~~f~   67 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN----AFA-VMRDNDGFILTLMKGKE---------VQYPKTFHVGFP   67 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT----TEE-EEECTTCCEEEEEECSS---------CCCCTTCCEEEE
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC----cce-eeeecceeeeeeeeeec---------ccccccceeeee
Confidence            5789999999999999999999999999887652    222 33333  3444443221         233567899999


Q ss_pred             eCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEE
Q 029305           90 CEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  135 (195)
Q Consensus        90 v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~  135 (195)
                      |++   ++++.++|++.|+++...+. .+   .+.+||+|||||.|||+
T Consensus        68 v~~~~~v~~~~~~l~~~G~~~~~~~~-~~---~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          68 QESEEQVDKINQRLKEDGFLVEPPKH-AH---AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCCCCCEE-C----CEEEEEEETTTEEEEEE
T ss_pred             eccccchhhhhhhHHHcCCccccCCC-Cc---eEEEEEECCCCCEEEEE
Confidence            986   77788999999999766542 22   37899999999999996

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.84  E-value=1.9e-20  Score=130.14  Aligned_cols=113  Identities=15%  Similarity=0.221  Sum_probs=86.5

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCc-EEEEeeeCCCCCCCCCCCCCCCCceEEEEEe
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGM-GIHLLKSEEPDNLPKAGKNINPKDNHISFQC   90 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~-~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v   90 (195)
                      ++|+|+.|.|+|+++|.+||+++||+++....+      .|..+..|. .+.+.....   .+.   ...+...+++|.|
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~------~~~~~~~g~~~l~l~~~~~---~~~---~~~~~~~~~~f~v   68 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQNHL---VPL---ENFQSGIIIHIEV   68 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESSCS---SSC---CCCCSCEEEEEEC
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC------CeEEEEEcCceeeeeeccc---CCC---CCCCcceEEEEEE
Confidence            468999999999999999999999999887644      233455553 444443321   111   2234456899999


Q ss_pred             CCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           91 ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        91 ~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +|+++++++|+++|+++..++... .++.+.+||+|||||.||+++.
T Consensus        69 ~D~d~~~~~l~~~G~~i~~~~~~~-~~g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          69 EDVDQNYKRLNELGIKVLHGPTVT-DWGTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             SCHHHHHHHHHHHTCCEEEEEEEC-TTSCEEEEEECGGGCEEEEEEC
T ss_pred             CCHHHHHHHHHhhccccccceEEe-eCCeEEEEEECCCCCEEEEEEe
Confidence            999999999999999998877543 3456899999999999999974

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.84  E-value=1.3e-20  Score=138.66  Aligned_cols=121  Identities=14%  Similarity=0.200  Sum_probs=85.1

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcE--EEEeeeCCCCCCCCCCCCCCCCceEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG--IHLLKSEEPDNLPKAGKNINPKDNHI   86 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~--~~ll~~~~~~~~~~~~~~~~~g~~Hi   86 (195)
                      |...+++||.|.|+|+++|++||+++|||++..+.........+.....+..  .......          ...+++.|+
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~h~   70 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH----------PEKGRLHHV   70 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEEC----------SSSSEEEEE
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccccccccccc----------CCCCcccee
Confidence            4567899999999999999999999999999875432222222212222211  1111111          233568999


Q ss_pred             EEEeCCHH---HHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           87 SFQCENMA---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        87 af~v~dl~---~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +|.+.+++   ++.++|++.|+++...+...+..+.+++||+|||||.|||+....
T Consensus        71 ~~~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          71 SFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             EEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             EEEEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence            99998655   777999999999887765443334589999999999999998643

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.83  E-value=1.2e-20  Score=135.03  Aligned_cols=130  Identities=12%  Similarity=0.246  Sum_probs=91.1

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEE-------eecCcEEEEeeeCCCCCCCCC---CCC
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRL-------FNYGMGIHLLKSEEPDNLPKA---GKN   78 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~-------~~~g~~~~ll~~~~~~~~~~~---~~~   78 (195)
                      -|+.+|+||+|.|+|+++|.+||+++||+++...............       ...+..+++++...+......   ...
T Consensus         3 ~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~   82 (145)
T d1jc4a_           3 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   82 (145)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccC
Confidence            3589999999999999999999999999998765432111111101       123356788776544332211   014


Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEE--ECCCCCEEEEEecC
Q 029305           79 INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFF--HDPDGSMIEICNCD  138 (195)
Q Consensus        79 ~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~--~DPdGn~iEi~~~~  138 (195)
                      ...|+.|+||.|+|+++++++|+++|+++...+...+..+.+.+|+  .||||+.|||++.+
T Consensus        83 ~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          83 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            4678999999999999999999999999876543332223344445  68999999999974

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.82  E-value=1.1e-19  Score=129.04  Aligned_cols=112  Identities=26%  Similarity=0.369  Sum_probs=83.0

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      |+++|+||+|.|+|++++.+||+++||+++..+.+.    ..+ +...+..++........       ....+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ----GAY-LELGSLWLCLSREPQYG-------GPAADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT----EEE-EEETTEEEEEEECTTCC-------CCCSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc----eee-eecCCeEEEEeeecccc-------ccccccccchhc
Confidence            578999999999999999999999999999887652    222 22333444444333221       233456677777


Q ss_pred             eC--CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           90 CE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        90 v~--dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      ++  |++++.++|+++|+++...+  .+  +.+.+||+|||||.|||+..
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~--~~--~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQN--RS--EGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECC--CS--SSCEEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHHHHCCCcCccCC--Cc--ceeEEEEECCCCCEEEEEEC
Confidence            65  99999999999999986654  22  23689999999999999874

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.82  E-value=2.3e-20  Score=132.69  Aligned_cols=111  Identities=19%  Similarity=0.241  Sum_probs=83.6

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCc---EEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGM---GIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~---~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      |++|+||.|.|+|++++.+||+++|||++..+.+    ...  .+..+.   .+.+..            ....++.|++
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~----~~~--~l~~~~~~~~l~l~~------------~~~~~~~h~~   63 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD----NGD--LFRIDSRAWRIAVQQ------------GEVDDLAFAG   63 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEE--EEESSSBSCSEEEEE------------CTTCEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCC----cce--EEeecCCceEEEEec------------CCCCCceEEE
Confidence            6889999999999999999999999999998765    233  344332   232221            1234689999


Q ss_pred             EEeC---CHHHHHHHHHhCCCeEeccceec--CCcceEEEEEECCCCCEEEEEecCC
Q 029305           88 FQCE---NMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        88 f~v~---dl~~~~~~l~~~gv~~~~~~~~~--~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      |.|.   +++++.++|+++|+++...+...  ...+.+.+||+|||||.|||+....
T Consensus        64 f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~~  120 (131)
T d1lgta1          64 YEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGAS  120 (131)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             EEEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCCC
Confidence            9997   57788999999999998765322  1123478999999999999997543

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.81  E-value=6.5e-20  Score=132.52  Aligned_cols=116  Identities=16%  Similarity=0.098  Sum_probs=85.0

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcE-EEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG-IHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~-~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      ..+++|+||.|.|+|++++++||+++|||++..+.+.    ..+ +...+.. .+......         ...+++.|++
T Consensus        12 ~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~---------~~~~~~~h~~   77 (146)
T d1f1ua1          12 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDEN----TIY-LRSLEEFIHHNLVLRQ---------GPIAAVAAFA   77 (146)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSS----EEE-EECTTCCSSCSEEEEE---------CSSCEEEEEE
T ss_pred             CCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecCC----cee-eecccccccceeeccc---------cCCCCCceee
Confidence            3588999999999999999999999999999987652    222 2222211 11111110         2235789999


Q ss_pred             EEeC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           88 FQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        88 f~v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      |.+.   |++++.++|+++|+++...+......+.+.+||+|||||.|||+...
T Consensus        78 ~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  131 (146)
T d1f1ua1          78 YRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYET  131 (146)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             EeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEec
Confidence            9998   68899999999999997765433322347899999999999999853

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.7e-19  Score=132.72  Aligned_cols=130  Identities=23%  Similarity=0.283  Sum_probs=87.7

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeec--------------------CcEEEEeeeCCC-
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNY--------------------GMGIHLLKSEEP-   69 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--------------------g~~~~ll~~~~~-   69 (195)
                      .-+++|++|.|+|+++|++||+++|||++..+.........+.....                    +....+...... 
T Consensus        21 ~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (176)
T d1qipa_          21 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTE  100 (176)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGG
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeeccc
Confidence            45699999999999999999999999998764331111111101111                    111222222111 


Q ss_pred             ---CCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCC
Q 029305           70 ---DNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPV  142 (195)
Q Consensus        70 ---~~~~~~~~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~  142 (195)
                         ............|+.|+||.++++++++++|+++|+++..++..  +.+...+||+|||||.|||++..+.+.
T Consensus       101 ~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~--g~~~~~~f~~DPdG~~IElvq~~~~~~  174 (176)
T d1qipa_         101 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDD--GKMKGLAFIQDPDGYWIEILNPNKMAT  174 (176)
T ss_dssp             GCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTS--SSSTTCEEEECTTCCEEEEECTTTGGG
T ss_pred             cccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCcc--CCceEEEEEECCCCCEEEEEeCCCCCc
Confidence               01111112345688999999999999999999999999988743  333456899999999999999877553

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.80  E-value=9.2e-20  Score=129.71  Aligned_cols=113  Identities=13%  Similarity=0.202  Sum_probs=83.7

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEE-EEeeeCCCCCCCCCCCCCCCCceEEEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGI-HLLKSEEPDNLPKAGKNINPKDNHISFQ   89 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~-~ll~~~~~~~~~~~~~~~~~g~~Hiaf~   89 (195)
                      |++|+||.|.|+|++++.+||+++|||++..+.+    +..|  +..+... .+....          ....++.|++|.
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~----~~~~--l~~~~~~~~l~~~~----------~~~~~~~h~~f~   65 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG----DAAL--YRADQRAWRIAVQP----------GELDDLAYAGLE   65 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEE--EESSSBSCSEEEEE----------CTTCEEEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc----ceee--eeeeecceeeeeec----------cCCCCceEEEEE
Confidence            6899999999999999999999999999988765    2333  3333221 121111          123468999999


Q ss_pred             eC---CHHHHHHHHHhCCCeEeccceecCC--cceEEEEEECCCCCEEEEEecCC
Q 029305           90 CE---NMAIVERRLKEMKIDYVKSRVEEGG--INVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        90 v~---dl~~~~~~l~~~gv~~~~~~~~~~~--~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      |+   +++++.++|+++|+++...+.....  .....+||.|||||.|||+....
T Consensus        66 v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~~  120 (132)
T d1kw3b1          66 VDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPA  120 (132)
T ss_dssp             CSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             eccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECCC
Confidence            97   5788999999999999876532211  12368999999999999997643

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.79  E-value=1.8e-19  Score=128.64  Aligned_cols=123  Identities=20%  Similarity=0.226  Sum_probs=81.6

Q ss_pred             cCccceEEE----EcCCHHHHHHHHHhccCCeEeecCCCC-CCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceE
Q 029305           11 LKSLNHISL----VCRSVEASLDFYQNVLGFFPIRRPGSF-DFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNH   85 (195)
Q Consensus        11 i~~i~hv~l----~v~dl~~s~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~H   85 (195)
                      +.++.|+.+    .|+|+++|++||+++|||++..+.... .+..++ +...+..+++.....+...+.   ....+..|
T Consensus         3 ~~~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~---~~~~~~~h   78 (137)
T d1twua_           3 FSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVM-FGLPHADYHLEFTQYEGGSTA---PVPHPDSL   78 (137)
T ss_dssp             CSSCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEETTEEEEE-EESSSSSEEEEEEEETTCCCC---CCCCTTCE
T ss_pred             cCCCceEEEEEecccCCHHHHHHHHHhccCCceeeeeccccceeEEE-ecCCCCceeeecccccccccc---cccccCce
Confidence            445555444    558999999999999999998764321 122222 222233333332222111111   33456789


Q ss_pred             EEEEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           86 ISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        86 iaf~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ++|.|++   +++++++|+++|+++..++.+.  ++.+.+||.|||||+|||..+..
T Consensus        79 laf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~--~~~~~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          79 LVFYVPNAVELAAITSKLKHMGYQEVESENPY--WSNGGVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             EEEECCCHHHHHHHHHHHHHTTCCEECCSSHH--HHSSEEEEECTTCCEEEEESSCC
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCeEeCCCCCC--CCceEEEEECCCCCEEEEEcCCC
Confidence            9999985   7888899999999998765433  34478999999999999998754

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.79  E-value=2.7e-19  Score=128.64  Aligned_cols=114  Identities=18%  Similarity=0.260  Sum_probs=80.7

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCc-E--EEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGM-G--IHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~-~--~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      +++|+||.|.|+|++++.+||+++|||++..+...    ..+.....+. .  ...+..           ....+..|++
T Consensus         5 i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~   69 (145)
T d1mpya1           5 VMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ----GRVYLKAWTEVDKFSLVLRE-----------ADEPGMDFMG   69 (145)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT----SCEEEECTTCCBSCSEEEEE-----------CSSCEEEEEE
T ss_pred             CcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeecc----Cccceecccccceeeccccc-----------cCcccceeee
Confidence            78999999999999999999999999999887552    2221222221 1  111111           1223456777


Q ss_pred             EEeC---CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           88 FQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        88 f~v~---dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      |.+.   |++++.++|+++|+++...+........+.+||.|||||.|||+....
T Consensus        70 ~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e  124 (145)
T d1mpya1          70 FKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (145)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             eeehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecc
Confidence            7665   789999999999999876553222223489999999999999997544

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.78  E-value=6.6e-19  Score=124.04  Aligned_cols=120  Identities=13%  Similarity=0.138  Sum_probs=82.9

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEee--cCcEEEEeeeCCCC-CCCCCCCCCCCCceEEEE
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFN--YGMGIHLLKSEEPD-NLPKAGKNINPKDNHISF   88 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--~g~~~~ll~~~~~~-~~~~~~~~~~~g~~Hiaf   88 (195)
                      .+|+|++|.|+|+++|++||++ |||.+......   ...+ .+.  .+..+.+....... ..+........+..|++|
T Consensus         1 ~ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   75 (128)
T d1klla_           1 ARISLFAVVVEDMAKSMEFYRK-MGVEIPAEADS---APHT-EAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAF   75 (128)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGG---CSEE-EEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEE
T ss_pred             CeEeEEEEEcCCHHHHHHHHHH-hCCcccccccc---ccce-eeeccceeeeeecccccccccCCCCCCCccccceeEee
Confidence            3689999999999999999987 89987765442   2222 332  23333333211100 011111134456789999


Q ss_pred             EeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           89 QCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        89 ~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      .|++   +++++++|+++|+++..++.. ..+|.+.+||+|||||.|||++.
T Consensus        76 ~v~~~~~l~~~~~~l~~~G~~~~~~p~~-~~~G~~~~~~~DPdG~~iel~~p  126 (128)
T d1klla_          76 EFPDTASVDKKYAELVDAGYEGHLKPWN-AVWGQRYAIVKDPDGNVVDLFAP  126 (128)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCEEEEEEEE-CTTSEEEEEEECTTSCEEEEEEE
T ss_pred             eeccchhhHHHHHHHHhccCccccCCeE-cCCCcEEEEEECCCCCEEEEEec
Confidence            9986   777899999999999887744 33466899999999999999874

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.78  E-value=6.7e-19  Score=120.45  Aligned_cols=110  Identities=17%  Similarity=0.218  Sum_probs=80.2

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeC
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   91 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~   91 (195)
                      ++| +..|.|+|+++|++||+++|||++....+.     ...+...+....++......       ....+..|++|.++
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~   68 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHGW-----IVTHASPLEAHAQVSFAREG-------GSGTDVPDLSIEVD   68 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECSS-----EEEEEEEEEEEEEEEEESSS-------BTTBCCCSEEEEES
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeecccc-----eeEeccccccceeeeccccc-------CCCCceeEEEEEec
Confidence            455 578999999999999999999999887652     11122222233332222111       22345578999999


Q ss_pred             CHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEE
Q 029305           92 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  135 (195)
Q Consensus        92 dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~  135 (195)
                      |+++++++++++|+++..++... .++.+.+|++|||||.|||+
T Consensus        69 dvd~~~~~l~~~g~~~~~~p~~~-~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          69 NFDEVHARILKAGLPIEYGPVTE-AWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEEC-TTSCEEEEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHhhccccccCCeEc-CCCcEEEEEECCCCCEEEeC
Confidence            99999999999999988776443 34568999999999999985

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.75  E-value=4.8e-18  Score=126.51  Aligned_cols=120  Identities=20%  Similarity=0.219  Sum_probs=77.8

Q ss_pred             ccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcE-EEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMG-IHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus        10 ~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~-~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      .+.+|+||+|.|+|++++++|| ++|||++..+....+..........+.. ..+....          ...+++.|++|
T Consensus         2 ~i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~~~~~~~H~~f   70 (176)
T d1f1ua2           2 ELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTG----------GNGPRMHHVAF   70 (176)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEE----------SSBSEEEEEEE
T ss_pred             ceeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceeccc----------ccCCCccceeE
Confidence            3678999999999999999999 6799998765321111111112222211 1111111          23457899999


Q ss_pred             EeCCH---HHHHHHHHhCCCeE--eccceecCCcceEEEEEECCCCCEEEEEecCCC
Q 029305           89 QCENM---AIVERRLKEMKIDY--VKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL  140 (195)
Q Consensus        89 ~v~dl---~~~~~~l~~~gv~~--~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~  140 (195)
                      .+.++   .++.++|+++|+..  ...+...+......+||+|||||.|||+.....
T Consensus        71 ~~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~~  127 (176)
T d1f1ua2          71 ATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDYY  127 (176)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCC
T ss_pred             EeccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCcc
Confidence            99954   45567888999864  333333222234689999999999999986543

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.75  E-value=2.7e-18  Score=120.91  Aligned_cols=119  Identities=18%  Similarity=0.229  Sum_probs=82.4

Q ss_pred             CccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecC----cEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYG----MGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        12 ~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      ++|+||+|.|+|+++|++||+++|||++..+.........+.....+    ...........   ... .....+..+++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~   77 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG---VTS-YKHDEAYGHIA   77 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETT---CCC-CCCCSSEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccC---ccc-ccCCCccceee
Confidence            57999999999999999999999999998865432222222111111    11111111111   111 14445677899


Q ss_pred             EEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           88 FQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        88 f~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      +.++++.++.+++...++++...+   +  +...+||+|||||.|||++..+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~---~--g~~~~~~~DPdGn~iEl~~~~~  124 (139)
T d2c21a1          78 IGVEDVKELVADMRKHDVPIDYED---E--SGFMAFVVDPDGYYIELLNEKT  124 (139)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEC---S--SSSEEEEECTTSCEEEEEEHHH
T ss_pred             eehhhHHHHHHHHHHcCCceeeCC---C--CcEEEEEECCCCCEEEEEECCC
Confidence            999999999999999999887654   2  3368999999999999998543

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.74  E-value=8.8e-18  Score=122.71  Aligned_cols=122  Identities=12%  Similarity=0.086  Sum_probs=78.3

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCC---CCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF---DFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~---~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      ..+|+||+|.|+|++++.+||+++|||++..+....   ........+..+...+.+...        .....++++|+|
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~--------~~~~~~gl~Hia   79 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALA--------AFPIPKRIHHFM   79 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEE--------CCSCSSSEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeec--------cCCCCCceeEEE
Confidence            368999999999999999999999999987542200   000001011121111111000        012345799999


Q ss_pred             EEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCC-EEEEEecCCCC
Q 029305           88 FQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS-MIEICNCDVLP  141 (195)
Q Consensus        88 f~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn-~iEi~~~~~~~  141 (195)
                      |.|++   +.++.++|+++|+.+..+. ........++|+.||||| .+|+.......
T Consensus        80 f~v~~~ddv~~~~d~l~~~G~~~~g~~-rH~~~~~~s~Y~~DP~G~~~~E~~~~~~~~  136 (156)
T d1kw3b2          80 LQANTIDDVGYAFDRLDAAGRITSLLG-RHTNDQTLSFYADTPSPMIEVEFGWGPRTV  136 (156)
T ss_dssp             EEBSSHHHHHHHHHHHHHTTCBCBCSE-EESSSCCEEEEEECSSTTCEEEEEECCCBC
T ss_pred             EECCCHHHHHHHHHHHHhcCCceecCc-ccCCCCeEEEEEECCCCCeEEEEecCCccc
Confidence            99985   5557799999998765433 322223478999999998 69998865433

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.73  E-value=9.8e-18  Score=122.98  Aligned_cols=133  Identities=10%  Similarity=0.068  Sum_probs=96.2

Q ss_pred             CCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCC--CCccEEEeecC-cEEEEeeeCCCCCCCCC-----CCC
Q 029305            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD--FDGACRLFNYG-MGIHLLKSEEPDNLPKA-----GKN   78 (195)
Q Consensus         7 ~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~--~~~~~~~~~~g-~~~~ll~~~~~~~~~~~-----~~~   78 (195)
                      +++.+.+|+||.|.|+|+++|++||+++|||+++.......  ....+..+..+ ..+.+.+..........     ...
T Consensus         1 ~p~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~   80 (163)
T d1t47a1           1 DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAE   80 (163)
T ss_dssp             CCSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhc
Confidence            36789999999999999999999999999999887543111  11122234333 55666655443221100     012


Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceec--CCcceEEEEEECCCCCEEEEEecCC
Q 029305           79 INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        79 ~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~--~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      .+.|..|+||.|+|+++++++|+++|+++...+...  .+.....+++.+|+|..++|++...
T Consensus        81 ~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          81 HGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             CCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            356899999999999999999999999998887543  3334678999999999999998654

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.71  E-value=1.4e-16  Score=110.63  Aligned_cols=107  Identities=19%  Similarity=0.233  Sum_probs=78.2

Q ss_pred             EEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCCHHHHH
Q 029305           18 SLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVE   97 (195)
Q Consensus        18 ~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~dl~~~~   97 (195)
                      .|.|+|+++|.+||++ |||++....+.    ..+ +...+..+.+......        .......++++.++++++++
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~~----~~~-~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDAG----WMI-LQRGDLMLEFFAHPGL--------DPLASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECSS----EEE-EEETTEEEEEEECTTC--------CGGGCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecCc----eee-eecceecccccccccc--------ccCCCCcEEEEEECCHHHHH
Confidence            4999999999999998 99999987542    222 3334445555544422        11233568999999999999


Q ss_pred             HHHHhCCCeEeccc------eecCCcceEEEEEECCCCCEEEEEecC
Q 029305           98 RRLKEMKIDYVKSR------VEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        98 ~~l~~~gv~~~~~~------~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      +.+++.|+.+....      .....+|.+.+||+|||||.|||++.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence            99999988875432      123445668999999999999999853

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.70  E-value=8.6e-17  Score=111.68  Aligned_cols=106  Identities=13%  Similarity=0.139  Sum_probs=77.7

Q ss_pred             EEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCCHHHHH
Q 029305           18 SLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVE   97 (195)
Q Consensus        18 ~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~dl~~~~   97 (195)
                      .|.|+|+++|++||+++|||++..+.+.    .++ +...+..+++......         ......++++.+++++++.
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~~----~~~-~~~~~~~l~l~~~~~~---------~~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDRD----FAG-VRRGDIRLHISRTEHQ---------IVADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECSS----EEE-EEETTEEEEEEECSCH---------HHHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCCc----eeE-eeeeeeeeeeeccccc---------cccceeEEEEeechhHHHH
Confidence            5999999999999999999999887652    233 3344566777655432         1123568999999999999


Q ss_pred             HHHHhCCCeEeccce------ecCCcceEEEEEECCCCCEEEEEec
Q 029305           98 RRLKEMKIDYVKSRV------EEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        98 ~~l~~~gv~~~~~~~------~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +++.+.++.......      ....++++.+||+|||||+|||...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            999999866543221      0112245899999999999999875

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=5.6e-17  Score=117.05  Aligned_cols=131  Identities=14%  Similarity=0.125  Sum_probs=92.8

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCC--CccEEEeecC-cEEEEeeeCCCCCCCCCC--CCCCCCc
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF--DGACRLFNYG-MGIHLLKSEEPDNLPKAG--KNINPKD   83 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~--~~~~~~~~~g-~~~~ll~~~~~~~~~~~~--~~~~~g~   83 (195)
                      ..+.+++||.|.|+|+++|++||+++|||+...+......  ...+..+..+ ..+.++........+...  .....|+
T Consensus         7 ~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G~   86 (149)
T d1sqia1           7 GRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGV   86 (149)
T ss_dssp             CEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEE
T ss_pred             CceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCeE
Confidence            3578899999999999999999999999998775432111  1122234444 445555544332211100  1335789


Q ss_pred             eEEEEEeCCHHHHHHHHHhCCCeEeccceec--CCcceEEEEEECCCCCEEEEEecCC
Q 029305           84 NHISFQCENMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        84 ~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~--~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      .|+||.|+|+++++++|+++|+++..+|...  .....+.+++..|+|..+||+++..
T Consensus        87 ~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~  144 (149)
T d1sqia1          87 KDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKIN  144 (149)
T ss_dssp             EEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEES
T ss_pred             EEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCC
Confidence            9999999999999999999999998877432  2223467888999999999999754

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.68  E-value=3.3e-16  Score=115.07  Aligned_cols=137  Identities=9%  Similarity=0.035  Sum_probs=95.9

Q ss_pred             CCCCCCCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCcc--EEEeecC-cEEEEeeeCCCCC-------
Q 029305            2 KESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGA--CRLFNYG-MGIHLLKSEEPDN-------   71 (195)
Q Consensus         2 ~~~~~~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~--~~~~~~g-~~~~ll~~~~~~~-------   71 (195)
                      +|...+++.+.+++||++.|+|++++.+||+++|||+...+.........  ...+..+ ..+.+........       
T Consensus         1 ~~p~~~~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   80 (167)
T d1sqda1           1 KNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKP   80 (167)
T ss_dssp             CCCCCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGG
T ss_pred             CCCCCCCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEecccccccccccccc
Confidence            34556778999999999999999999999999999998876432211111  1123333 3333322211100       


Q ss_pred             -----CCCCC--------CCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           72 -----LPKAG--------KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        72 -----~~~~~--------~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                           .+...        .....|+.|+||.|+|+++++++|+++|++...+|....+ +.+.+++..+++...+|+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~-~~~~a~I~~~gd~~~~~v~r~  159 (167)
T d1sqda1          81 TTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYK  159 (167)
T ss_dssp             GCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEEC
T ss_pred             ccccccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCC-CEEEEEEEccCCcEEEEEecC
Confidence                 00000        0124589999999999999999999999999988865543 457789999999999999974


Q ss_pred             C
Q 029305          139 V  139 (195)
Q Consensus       139 ~  139 (195)
                      .
T Consensus       160 ~  160 (167)
T d1sqda1         160 A  160 (167)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.65  E-value=1.8e-15  Score=111.81  Aligned_cols=136  Identities=9%  Similarity=0.016  Sum_probs=95.1

Q ss_pred             CCCCCCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEE--EeecC-cEEEEeeeCCCCCCCC---CC
Q 029305            3 ESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACR--LFNYG-MGIHLLKSEEPDNLPK---AG   76 (195)
Q Consensus         3 ~~~~~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~--~~~~g-~~~~ll~~~~~~~~~~---~~   76 (195)
                      |..++...+.+++||.|.|+|++++++||+++|||+.+.+.........+.  .+..+ ..+.+...........   ..
T Consensus         3 ~~~~d~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (172)
T d1sp8a1           3 NPRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALP   82 (172)
T ss_dssp             CCCCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSST
T ss_pred             CCCCccCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccc
Confidence            344567889999999999999999999999999999987644211111111  23333 2333322222111100   00


Q ss_pred             -----------CCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           77 -----------KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        77 -----------~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                                 ...+.|+.|+||.|+|+++++++|+++|+++..+|....+ +.+.++++.|.+..++|+++.+
T Consensus        83 ~~~~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~-g~~~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          83 SFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             TCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCT
T ss_pred             cCCcchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCC-CEEEEEEECCCCcEEEEEecCC
Confidence                       0134688999999999999999999999999888855433 5688899999888999999865

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.62  E-value=3.8e-15  Score=102.53  Aligned_cols=105  Identities=14%  Similarity=0.209  Sum_probs=74.0

Q ss_pred             eEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEEEeCCHHH
Q 029305           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAI   95 (195)
Q Consensus        16 hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf~v~dl~~   95 (195)
                      ...|.|+|+++|++||+++|||++..+.+.    ..+ +...+..+++......         ...+..++.+.+.+++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~~----~~~-~~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVEDD----FAG-VVRDDVTLFISAVQDQ---------VVPDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECSS----EEE-EEETTEEEEEEECSCT---------TTGGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECCC----eeE-Eecccceeeccccccc---------cCCCCceEEEeeccHHH
Confidence            445999999999999999999999987652    222 3334455666554432         22345678899999999


Q ss_pred             HHHHHHhCCCeEe--------ccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           96 VERRLKEMKIDYV--------KSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        96 ~~~~l~~~gv~~~--------~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      +...+.+...+..        .++.. .+ +++.+||+|||||.|||+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVE-QP-WGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEE-ET-TEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCcee-cC-CEEEEEEECCCCCEEEEEE
Confidence            9888776654432        22322 22 2379999999999999986

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.53  E-value=2.9e-15  Score=108.46  Aligned_cols=125  Identities=15%  Similarity=0.231  Sum_probs=93.0

Q ss_pred             CCCcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEeecCcEEEEeeeCCCCCCCCCC-CCCCCCce
Q 029305            6 ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFNYGMGIHLLKSEEPDNLPKAG-KNINPKDN   84 (195)
Q Consensus         6 ~~~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~~ll~~~~~~~~~~~~-~~~~~g~~   84 (195)
                      .|||.+.+|+||.+.|.|++++.+||++ |||+...+..+   .... ++..|. +.++....+.+...+. ...++|+.
T Consensus         2 ~np~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~---~~~~-l~~~G~-i~ll~~~~~~s~~~~~~~~hg~gv~   75 (150)
T d1cjxa1           2 ENPMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRS---KNVH-LYRQGE-INLILNNEPNSIASYFAAEHGPSVC   75 (150)
T ss_dssp             CCTTCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESS---SSEE-EEEETT-EEEEEECCSSSHHHHHHHHHSSEEE
T ss_pred             CCCCccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccc---eEEE-EEecCc-EEEEecCCCCCHhHhHHhhCCCceE
Confidence            3678899999999999999999999987 99999886442   2233 455553 3343333222211111 25668999


Q ss_pred             EEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecC
Q 029305           85 HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  138 (195)
Q Consensus        85 Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  138 (195)
                      |+||+|+|++++++++.++|++....+...+..  ....++.|+|..+.+++..
T Consensus        76 hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~~g~~--~~~~i~g~gg~~i~Fv~~~  127 (150)
T d1cjxa1          76 GMAFRVKDSQKAYNRALELGAQPIHIDTGPMEL--NLPAIKGIGGAPLYLIDRF  127 (150)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCBCCCCCCTTCB--CCCEEECGGGCEEEEECCC
T ss_pred             EEEEEeCCHHHHHHHHHHCCCEEcccCCCCCce--eeeEEEcCCCCEEEEECcC
Confidence            999999999999999999999988877554433  4667889999999999854

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.52  E-value=9e-14  Score=98.13  Aligned_cols=118  Identities=8%  Similarity=-0.056  Sum_probs=75.6

Q ss_pred             eEEEEcCCHHHHHHHHHhccCCeEeecCCCCCC-------CccEEEeecCcE-EEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF-------DGACRLFNYGMG-IHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        16 hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~-------~~~~~~~~~g~~-~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      ++.+.+.|+++|.+||+++||++++.+....+.       ......+..+.. +.+...... ...... ...+...+++
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~l~   87 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSL-PGFSTA-KSEGSGVTFL   87 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGS-TTCCCC-CTTSCCCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccc-cccccC-CCCCcceEEE
Confidence            456667799999999999999998765431100       011122333333 333322211 111111 2333456999


Q ss_pred             EEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           88 FQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        88 f~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      +.++|+++++.++.+.|.+++.++.. ..++.+.++++||+|+.|+|.+
T Consensus        88 ~~v~d~~~~~~~~~~~g~~~~~~~~~-~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          88 LGTKDAEAAVAKAVDAGAVKVEVTEA-EVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEECCCCHH-HHHTTEEEEEECTTSCEEEEEC
T ss_pred             EeecCcceeEEEeecccceEecCccc-ccccCEEEEEECCCCCEEEEeC
Confidence            99999999999999999999887633 3345588999999999999974

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.10  E-value=6.6e-11  Score=90.43  Aligned_cols=98  Identities=11%  Similarity=0.142  Sum_probs=64.6

Q ss_pred             CcccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCC----CCccE-EEee--c-CcEEEEeeeCCCCCCCCC---C
Q 029305            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD----FDGAC-RLFN--Y-GMGIHLLKSEEPDNLPKA---G   76 (195)
Q Consensus         8 ~~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~----~~~~~-~~~~--~-g~~~~ll~~~~~~~~~~~---~   76 (195)
                      ...+++|+||++.|+|+++++.||+++|||+...+....+    ..+.. ..+.  . ...+.+.+...+......   .
T Consensus         4 d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~F   83 (224)
T d1sp8a2           4 DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTF   83 (224)
T ss_dssp             CCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHH
T ss_pred             CCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHH
Confidence            4578999999999999999999999999999876432111    11111 0111  1 245566655432111110   0


Q ss_pred             --CCCCCCceEEEEEeCCHHHHHHHHHhCCC
Q 029305           77 --KNINPKDNHISFQCENMAIVERRLKEMKI  105 (195)
Q Consensus        77 --~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv  105 (195)
                        ...+.|+.|+||.|+|+.+..+.|+++|+
T Consensus        84 L~~~~g~GiqHIAf~vdDI~~av~~L~arGv  114 (224)
T d1sp8a2          84 LDHHGGPGVQHMALASDDVLRTLREMQARSA  114 (224)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGG
T ss_pred             HHhccCCCceeEEEEeCCHHHHHHHHHhccc
Confidence              12457899999999999999999998753

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.04  E-value=8.9e-11  Score=88.44  Aligned_cols=102  Identities=13%  Similarity=0.126  Sum_probs=67.5

Q ss_pred             ccCccceEEEEcC--CHHHHHHHHHhccCCeEeecCCCCCCCccE--EEe-ec--CcEEEEeeeCCCCCCC-CCC--CCC
Q 029305           10 CLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGSFDFDGAC--RLF-NY--GMGIHLLKSEEPDNLP-KAG--KNI   79 (195)
Q Consensus        10 ~i~~i~hv~l~v~--dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~--~~~-~~--g~~~~ll~~~~~~~~~-~~~--~~~   79 (195)
                      .+++|+||++.|+  |+++++.||+++|||+.....+-.+..+..  ... ..  +..+.+.......... ...  ...
T Consensus         2 Gl~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~   81 (203)
T d1cjxa2           2 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFN   81 (203)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHT
T ss_pred             CCCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcC
Confidence            3688999999997  999999999999999987653211111111  011 11  1233333332211110 000  135


Q ss_pred             CCCceEEEEEeCCHHHHHHHHHhCCCeEeccc
Q 029305           80 NPKDNHISFQCENMAIVERRLKEMKIDYVKSR  111 (195)
Q Consensus        80 ~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~  111 (195)
                      ++|+.|+||.|+|+.+..++|+++|+++...|
T Consensus        82 g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          82 GEGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             SSBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            67899999999999999999999999987654

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.02  E-value=7.6e-10  Score=82.85  Aligned_cols=102  Identities=12%  Similarity=0.183  Sum_probs=67.2

Q ss_pred             ccCccceEEEEcC--CHHHHHHHHHhccCCeEeecCCCCC---CCccEE--EeecC---cEEEEeeeCCCC--CCCCC--
Q 029305           10 CLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGSFD---FDGACR--LFNYG---MGIHLLKSEEPD--NLPKA--   75 (195)
Q Consensus        10 ~i~~i~hv~l~v~--dl~~s~~FY~~~LG~~~~~~~~~~~---~~~~~~--~~~~g---~~~~ll~~~~~~--~~~~~--   75 (195)
                      .+++|+||++.|+  ++++++.||+++|||+........+   ..+...  .....   ..+.+-......  +...+  
T Consensus         3 ~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             cceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhh
Confidence            4789999999998  9999999999999999876432110   011110  11111   223333222111  10000  


Q ss_pred             CCCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccc
Q 029305           76 GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSR  111 (195)
Q Consensus        76 ~~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~  111 (195)
                      ....++|+.|+||.|+|+.+..++|+++|+++...|
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            013457999999999999999999999999998776

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.95  E-value=1.8e-08  Score=70.58  Aligned_cols=113  Identities=13%  Similarity=-0.050  Sum_probs=69.6

Q ss_pred             EEcC-CHHHHHHHHHhccCCeEeecCCCCCCC----------cc--EEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceE
Q 029305           19 LVCR-SVEASLDFYQNVLGFFPIRRPGSFDFD----------GA--CRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNH   85 (195)
Q Consensus        19 l~v~-dl~~s~~FY~~~LG~~~~~~~~~~~~~----------~~--~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~H   85 (195)
                      |..+ |.+++.+||+++||+++..+....+..          +.  ...+..+..........+ ..+    ...++..+
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~-~~~----~~~~~~~~   82 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHP-AYP----YEGIKGCS   82 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCT-TSC----CCCCCSEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCC-ccc----ccCCCcEE
Confidence            4445 999999999999999987642111000          10  011222222211211111 111    23345678


Q ss_pred             EEEEeCCHH--HHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           86 ISFQCENMA--IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        86 iaf~v~dl~--~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +++.+++.+  +.+.++.+.|.+++.++.. ..|+.+..+|+||+|+.|+|...
T Consensus        83 ~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~-~~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          83 ISLNVDSKAEAERLFNALAEGGSVQMPLGP-TFWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             EEEECSSHHHHHHHHHHHHTTSEEEEEEEE-ETTEEEEEEEECTTSCEEEEEES
T ss_pred             EEEEcCCHHHHHHHHhhcccCceeecCccc-cCCCcEEEEEECCCCCEEEEEec
Confidence            899988544  4466666789999887744 45667899999999999999764

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=5.3e-10  Score=84.40  Aligned_cols=103  Identities=15%  Similarity=0.211  Sum_probs=66.9

Q ss_pred             cccCccceEEEEcCC--HHHHHHHHHhccCCeEeecCCCCCC----CccE-EEee-c-C-cEEEEeeeCCCCCCC--CCC
Q 029305            9 LCLKSLNHISLVCRS--VEASLDFYQNVLGFFPIRRPGSFDF----DGAC-RLFN-Y-G-MGIHLLKSEEPDNLP--KAG   76 (195)
Q Consensus         9 ~~i~~i~hv~l~v~d--l~~s~~FY~~~LG~~~~~~~~~~~~----~~~~-~~~~-~-g-~~~~ll~~~~~~~~~--~~~   76 (195)
                      ..++.|+||++.|.+  +++++.||+++|||+..+..+..+.    .+.. ..+. . + ..+.+.+........  .+.
T Consensus        20 ~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~~f   99 (210)
T d1sqia2          20 CNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQEY   99 (210)
T ss_dssp             CCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHHHH
T ss_pred             CCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHHHH
Confidence            468899999999987  9999999999999998764321111    1110 0111 1 1 334343322111000  000


Q ss_pred             --CCCCCCceEEEEEeCCHHHHHHHHHhCCCeEeccc
Q 029305           77 --KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSR  111 (195)
Q Consensus        77 --~~~~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~  111 (195)
                        ...++|+.|+||.|+|+.+..++|+++|+++...|
T Consensus       100 l~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P  136 (210)
T d1sqia2         100 VDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP  136 (210)
T ss_dssp             HHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCC
T ss_pred             HhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence              13577899999999999999999999999998766

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.84  E-value=2.6e-09  Score=81.66  Aligned_cols=96  Identities=11%  Similarity=0.132  Sum_probs=62.7

Q ss_pred             cccCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccE---E--Eee---cCcEEEEeeeCCCCCCCC---C--
Q 029305            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAC---R--LFN---YGMGIHLLKSEEPDNLPK---A--   75 (195)
Q Consensus         9 ~~i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~---~--~~~---~g~~~~ll~~~~~~~~~~---~--   75 (195)
                      ..+++|+||++.|.|++++.+||+++||+.........+....+   .  ...   ....+.+.+...+.....   .  
T Consensus        18 ~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~FL   97 (230)
T d1sqda2          18 YGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYL   97 (230)
T ss_dssp             SSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHH
T ss_pred             CCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHHHH
Confidence            45899999999999999999999999999887764422211111   0  111   114455555432211100   0  


Q ss_pred             CCCCCCCceEEEEEeCCHHHHHHHHHhCC
Q 029305           76 GKNINPKDNHISFQCENMAIVERRLKEMK  104 (195)
Q Consensus        76 ~~~~~~g~~Hiaf~v~dl~~~~~~l~~~g  104 (195)
                      ....++|+.|+||.|+|+.+..++|+++|
T Consensus        98 ~~~~G~GiQHIAf~tdDI~aav~~LrarG  126 (230)
T d1sqda2          98 EHNEGAGLQHLALMSEDIFRTLREMRKRS  126 (230)
T ss_dssp             HHHTSCEEEEEEEEESCHHHHHHHHHHHG
T ss_pred             hhccCCceeEEEEEeCCHHHHHHHHHHhh
Confidence            01457799999999999999999999864

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.48  E-value=6.8e-06  Score=56.92  Aligned_cols=113  Identities=17%  Similarity=0.169  Sum_probs=66.6

Q ss_pred             eEEEEcCCHHHHHHHHHhccCCeEeecC---C-C-CCCCcc--EEEeecC-cEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           16 HISLVCRSVEASLDFYQNVLGFFPIRRP---G-S-FDFDGA--CRLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        16 hv~l~v~dl~~s~~FY~~~LG~~~~~~~---~-~-~~~~~~--~~~~~~g-~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      ++.+.-+|.+++.+||+++||.+.+.+.   + . .+..+.  ...+..+ ..+.+.......  +    ...++...++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~~~--~----~~~~~~~s~~   82 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRH--A----FDFTPAFSFF   82 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCC--S----CCCCTTEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCCCC--C----CCCCCceEEE
Confidence            4555556999999999999998754321   1 0 011111  1123333 334333322111  1    2223446788


Q ss_pred             EEeCCHH---HHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           88 FQCENMA---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        88 f~v~dl~---~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      +.+++.+   .+++.| +.|.++..++ .+..|+.+...++||.|+.|.|.-
T Consensus        83 l~~~~~d~~~~~~~~l-~~gg~v~~p~-~~~~~g~~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          83 VDCESNAQIERLAEAL-SDGGKALMPL-GDYGFSQRFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             EECCCHHHHHHHHHHH-HTTSEEEEEE-ECCSSSSEEEEEECTTSCEEEEEE
T ss_pred             EEeccHHHHHHHHHHH-hcCCEEecCc-ccccccceEEEEECCCCCEEEEEc
Confidence            8888544   344554 6677777665 344556688999999999999864

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.04  E-value=0.00016  Score=49.33  Aligned_cols=109  Identities=10%  Similarity=0.065  Sum_probs=61.1

Q ss_pred             EEEEcC-CHHHHHHHHHhccCCeEeecC---C-CC-CCCcc--EEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEEE
Q 029305           17 ISLVCR-SVEASLDFYQNVLGFFPIRRP---G-SF-DFDGA--CRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISF   88 (195)
Q Consensus        17 v~l~v~-dl~~s~~FY~~~LG~~~~~~~---~-~~-~~~~~--~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hiaf   88 (195)
                      ..|..+ |.+++.+||+++||-..+.+.   + .. +.++.  ...+..+....++....+ ..+        ....+++
T Consensus         8 Pyl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~~~d~~~-~~~--------~~~s~~v   78 (129)
T d1tsja_           8 TFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANS-GTE--------LPISLFV   78 (129)
T ss_dssp             EEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC----------------CCCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEEeecCCC-CCC--------CCEEEEe
Confidence            556666 999999999999975433221   1 00 00111  122333433222222211 111        1234777


Q ss_pred             EeCCHHH---HHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEe
Q 029305           89 QCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  136 (195)
Q Consensus        89 ~v~dl~~---~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~  136 (195)
                      .+++.++   ++++|. .|.+++.+. ....++.+...+.||.|+.|-|..
T Consensus        79 ~~~~~~e~~~~~~~L~-~gg~v~~p~-~~~~~g~~~g~v~D~fGv~W~i~~  127 (129)
T d1tsja_          79 TVKDTIEMERLFNGLK-DEGAILMPK-TNMPPYREFAWVQDKFGVSFQLAL  127 (129)
T ss_dssp             ECSSHHHHHHHHHHHH-TTCEEEEEE-EEETTEEEEEEEECTTSCEEEEEE
T ss_pred             ccCCHHHHHHHHHHhc-cCCEEeccc-ccccccceEEEEECCCCCEEEEeC
Confidence            8886554   556664 455776655 334556688899999999999975

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.56  E-value=0.0015  Score=45.92  Aligned_cols=109  Identities=8%  Similarity=0.019  Sum_probs=61.7

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhccccccc
Q 029305           81 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTV  159 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~  159 (195)
                      .++.|++|.|+|++++.+...+ .|.++........+......+.....+..+.+....... ......+ .......+.
T Consensus        11 ~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~-~~~~~~~~~   88 (167)
T d1sqda1          11 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPS-LSAGEIK-PTTTASIPS   88 (167)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGG-GTTTCCG-GGCCCSSTT
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEecccccc-ccccccc-ccccccccc
Confidence            4689999999999999998875 799877654333332234455455555555555432211 1111111 111110111


Q ss_pred             chhhhh-hhh-hhcCCCCCCCccccccccccccc
Q 029305          160 NCNFHQ-QQI-QQEPQINPQSCLSDSIHAKEDFL  191 (195)
Q Consensus       160 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~  191 (195)
                      .-.... ..+ ...+.+.|+.|.++||+++.+-+
T Consensus        89 ~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l  122 (167)
T d1sqda1          89 FDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS  122 (167)
T ss_dssp             CCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH
T ss_pred             CCcchHHHhhhccCCCceEEEEEeCCHHHHHHHH
Confidence            111111 112 24789999999999999887543

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=96.14  E-value=0.0032  Score=43.93  Aligned_cols=93  Identities=8%  Similarity=0.025  Sum_probs=58.1

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhccccccc
Q 029305           81 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTV  159 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~  159 (195)
                      .++.|++|.|.|+++..+...+ .|.++......+.+......++....+..+++......       .      +  +.
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~-------~------~--~~   70 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKP-------A------T--PW   70 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSC-------C------S--HH
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCC-------C------C--cc
Confidence            4689999999999999999986 79988754422222222344555556666777664221       0      0  00


Q ss_pred             chhhhhhh-hhhcCCCCCCCccccccccccc
Q 029305          160 NCNFHQQQ-IQQEPQINPQSCLSDSIHAKED  189 (195)
Q Consensus       160 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  189 (195)
                       ....... ....+.+.|+.|.++|+.++.+
T Consensus        71 -~~~~~~~~~~~g~G~~hiaf~VdDid~a~~  100 (163)
T d1t47a1          71 -GHFLADHVAEHGDGVVDLAIEVPDARAAHA  100 (163)
T ss_dssp             -HHHHHHHHHHHCSEEEEEEEECSCHHHHHH
T ss_pred             -ccccchhhhcCCCceEEEEEeeCCHHHHHH
Confidence             0011122 2236789999999999988754

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.84  E-value=0.0046  Score=42.31  Aligned_cols=90  Identities=7%  Similarity=-0.032  Sum_probs=53.8

Q ss_pred             CCceEEEEEeCCHHHHHHHHH-hCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhccccccc
Q 029305           81 PKDNHISFQCENMAIVERRLK-EMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTV  159 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~-~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~  159 (195)
                      .+++|++|.|.|++++.+.-. ..|.+.........+......+...-++..+++......+      ..          
T Consensus        10 ~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~----------   73 (149)
T d1sqia1          10 LHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPW------NK----------   73 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTT------CH----------
T ss_pred             eeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCC------Cc----------
Confidence            468899999999999999775 5799876554332222223333344455566666532211      00          


Q ss_pred             chhhhhh-hhhhcCCCCCCCccccccccccc
Q 029305          160 NCNFHQQ-QIQQEPQINPQSCLSDSIHAKED  189 (195)
Q Consensus       160 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  189 (195)
                         ...+ ....++.++|+.|.++|+.++.+
T Consensus        74 ---~~~~~~~~~g~G~~hiaf~V~di~~~~~  101 (149)
T d1sqia1          74 ---EMGDHLVKHGDGVKDIAFEVEDCEHIVQ  101 (149)
T ss_dssp             ---HHHHHHHHHCSEEEEEEEEEECHHHHHH
T ss_pred             ---hhhhhhhhCCCeEEEEEEEeccHHHHHH
Confidence               0111 12246778888888888877654

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=95.59  E-value=0.0089  Score=42.02  Aligned_cols=103  Identities=5%  Similarity=-0.055  Sum_probs=58.5

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhccccccc
Q 029305           81 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTV  159 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~  159 (195)
                      -++.|++|.|.|++++.+...+ .|.++........+......+.....+..+.+........... .   .....   .
T Consensus        12 ~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~---~   84 (172)
T d1sp8a1          12 LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAA-T---AALPS---F   84 (172)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGG-G---CSSTT---C
T ss_pred             CEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhh-h---ccccc---C
Confidence            4789999999999999998875 7988875432222222234444444455555555332111101 0   00011   1


Q ss_pred             chhhhhhh-hhhcCCCCCCCcccccccccccc
Q 029305          160 NCNFHQQQ-IQQEPQINPQSCLSDSIHAKEDF  190 (195)
Q Consensus       160 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  190 (195)
                      .-...... ....+.+.|+.|.++||.++.+-
T Consensus        85 ~~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~  116 (172)
T d1sp8a1          85 SAAAARRFAADHGLAVRAVALRVADAEDAFRA  116 (172)
T ss_dssp             CHHHHHHHHHHHSSEEEEEEEEESCHHHHHHH
T ss_pred             CcchhhhhhhhcCCceEEEEEeeCcHHHHHHH
Confidence            11111111 22478999999999999987653

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=95.37  E-value=0.015  Score=43.07  Aligned_cols=95  Identities=7%  Similarity=0.005  Sum_probs=58.0

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-CCCeEeccc----eecCCcceEEEEEECCCCCE-EEEEecCCCCCCCCCCcchhhccc
Q 029305           82 KDNHISFQCENMAIVERRLKE-MKIDYVKSR----VEEGGINVDQLFFHDPDGSM-IEICNCDVLPVVPLAGDAVRIRSC  155 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~----~~~~~~~~~~~~~~DPdGn~-iEi~~~~~~~~~p~~~~~~~~~~~  155 (195)
                      .+.|+++.|+|++++.+..+. .|.......    ......+.++..+..|+|.. +++.+..    .|..         
T Consensus         9 ~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~----~~~~---------   75 (224)
T d1sp8a2           9 RFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPV----HGTK---------   75 (224)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEEC----CCSS---------
T ss_pred             eeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeec----CCCC---------
Confidence            578999999999999988876 688754322    11122245677888888754 5555521    1111         


Q ss_pred             ccccchhhhhhhhhhcCCCCCCCccccccccccccc
Q 029305          156 TSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFL  191 (195)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (195)
                        .-+.-..+-....-+.|+|+.|.++||.++.+.+
T Consensus        76 --~~s~i~~FL~~~~g~GiqHIAf~vdDI~~av~~L  109 (224)
T d1sp8a2          76 --RRSQIQTFLDHHGGPGVQHMALASDDVLRTLREM  109 (224)
T ss_dssp             --SCCHHHHHHHHHTSSEEEEEEEEETTHHHHHHHH
T ss_pred             --CccHHHHHHHhccCCCceeEEEEeCCHHHHHHHH
Confidence              1111112222234578999999999998876543

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=95.21  E-value=0.016  Score=38.90  Aligned_cols=57  Identities=21%  Similarity=0.292  Sum_probs=40.9

Q ss_pred             CCceEEEEEeCCHHHHHHHHHhCCCeEeccceec----------CCcceEEEEEECCCC-CEEEEEec
Q 029305           81 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE----------GGINVDQLFFHDPDG-SMIEICNC  137 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~----------~~~~~~~~~~~DPdG-n~iEi~~~  137 (195)
                      -++.|+++.|+|+++..+--++.|.++.......          .+...+.+++..++| ..+++++.
T Consensus         8 ~ri~Hv~i~v~Dle~s~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~   75 (149)
T d1ss4a_           8 LRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   75 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             CEEeEEEEEeCCHHHHHHHHHHcCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEee
Confidence            4689999999999999998888898876543221          112346777888876 56777753

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.70  E-value=0.38  Score=33.00  Aligned_cols=104  Identities=12%  Similarity=0.079  Sum_probs=59.0

Q ss_pred             eEEEEcCCHHHHHHHHHhccCC-eEeec--C-CCC-C-CCc-c-EEEeecCcEEEEeeeCCCCCCCCCCCCCCCCceEEE
Q 029305           16 HISLVCRSVEASLDFYQNVLGF-FPIRR--P-GSF-D-FDG-A-CRLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   87 (195)
Q Consensus        16 hv~l~v~dl~~s~~FY~~~LG~-~~~~~--~-~~~-~-~~~-~-~~~~~~g~~~~ll~~~~~~~~~~~~~~~~~g~~Hia   87 (195)
                      -.-+.-.|.+++.+||+++||- ++...  . +.. + ..+ . ...+..+ +..++..+..+..      ......+++
T Consensus         5 ~~L~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~-g~~lm~sD~~~~~------~~~~~~sl~   77 (156)
T d1u69a_           5 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM-GIPCLGLNGGPAF------RHSEAFSFQ   77 (156)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET-TEEEEEEECCTTC------CCCTTEEEE
T ss_pred             EeeeECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEEC-CeEEEeecCCCCC------CCCCCeEEE
Confidence            3344457999999999999964 33331  1 100 0 011 1 1123333 3444444432211      123346788


Q ss_pred             EEeCC---HHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEec
Q 029305           88 FQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  137 (195)
Q Consensus        88 f~v~d---l~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~  137 (195)
                      +.+++   ++.+++.|.+.| ++..+    -|      .+.|..|..|.|+..
T Consensus        78 l~~d~~eE~d~~f~~LsegG-~~~~~----~G------~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          78 VATDDQAETDRLWNAIVDNG-GEESA----CG------WCRDKWGISWQITPR  119 (156)
T ss_dssp             EEESSHHHHHHHHHHHHHTT-CEECS----TT------EEECTTSCEEEEEEH
T ss_pred             EecCCHHHHHHHHHHHhccC-CCCCC----Ce------EEECCCCCEEEeChH
Confidence            88884   667778887665 22221    23      499999999999975

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=92.71  E-value=0.35  Score=30.17  Aligned_cols=52  Identities=13%  Similarity=0.282  Sum_probs=40.8

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCCCEEEEEecCC
Q 029305           82 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  139 (195)
Q Consensus        82 g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~  139 (195)
                      ++.|+.+.|+|+++..+-..+ .|.++....   ++   ..+++.++++..+.+.....
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~   55 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GN---AFAVMRDNDGFILTLMKGKE   55 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TT---TEEEEECTTCCEEEEEECSS
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEee---cC---cceeeeecceeeeeeeeeec
Confidence            578999999999999988776 698886543   22   36678888999999887543

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=91.20  E-value=0.23  Score=32.45  Aligned_cols=56  Identities=16%  Similarity=0.150  Sum_probs=38.0

Q ss_pred             cCccceEEEEcCCHHHHHHHHHhccCCeEeecCCCCCCCccEEEee-----cCcEEEEeeeC
Q 029305           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGACRLFN-----YGMGIHLLKSE   67 (195)
Q Consensus        11 i~~i~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-----~g~~~~ll~~~   67 (195)
                      -.+++|+.+.|.|++++.+-.++ .|.+++.........+....+-     .|..++|++..
T Consensus        84 ~~g~~Hia~~v~di~~~~~~l~~-~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          84 RAGLHHMAWRVDDIDAVSATLRE-RGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHH-HTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCcceEEEEecchHHHHHHHHHH-CCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            35699999999999999999998 8999865432222233322221     35677777653

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=90.90  E-value=0.039  Score=37.93  Aligned_cols=83  Identities=11%  Similarity=0.093  Sum_probs=51.8

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHhCCCeEeccceecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhccccccc
Q 029305           80 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTV  159 (195)
Q Consensus        80 ~~g~~Hiaf~v~dl~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~~~~~~  159 (195)
                      ..|+.|+.|.|+|++++.+.+.+.|.......  ...   ....+.  .|.+..+....        .++     .    
T Consensus         7 ~~Gidhv~fav~d~~~~~~~~~~lGF~~~~~~--~~~---~~~l~~--~G~i~ll~~~~--------~~s-----~----   62 (150)
T d1cjxa1           7 LMGFEFIEFASPTPGTLEPIFEIMGFTKVATH--RSK---NVHLYR--QGEINLILNNE--------PNS-----I----   62 (150)
T ss_dssp             EEEEEEEEEECSSTTSSHHHHHHTTCEEEEEE--SSS---SEEEEE--ETTEEEEEECC--------SSS-----H----
T ss_pred             cCCEEEEEEecCCHHHHHHHHHHhCCEEEecc--cce---EEEEEe--cCcEEEEecCC--------CCC-----H----
Confidence            34789999999999999999999998876543  111   122232  23333333211        110     0    


Q ss_pred             chhhhhhh-hhhcCCCCCCCcccccccccccc
Q 029305          160 NCNFHQQQ-IQQEPQINPQSCLSDSIHAKEDF  190 (195)
Q Consensus       160 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  190 (195)
                          ..+. ....|.++|+.|.++|++++.+-
T Consensus        63 ----~~~~~~~hg~gv~hiaf~V~D~~~a~~~   90 (150)
T d1cjxa1          63 ----ASYFAAEHGPSVCGMAFRVKDSQKAYNR   90 (150)
T ss_dssp             ----HHHHHHHHSSEEEEEEEEESCHHHHHHH
T ss_pred             ----hHhHHhhCCCceEEEEEEeCCHHHHHHH
Confidence                1122 23478999999999999988654

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=90.29  E-value=0.32  Score=34.87  Aligned_cols=92  Identities=11%  Similarity=0.043  Sum_probs=56.1

Q ss_pred             CceEEEEEeC--CHHHHHHHHHh-CCCeEeccc-eecCCcceEEEEEECCCCC-EEEEEecCCCCCCCCCCcchhhcccc
Q 029305           82 KDNHISFQCE--NMAIVERRLKE-MKIDYVKSR-VEEGGINVDQLFFHDPDGS-MIEICNCDVLPVVPLAGDAVRIRSCT  156 (195)
Q Consensus        82 g~~Hiaf~v~--dl~~~~~~l~~-~gv~~~~~~-~~~~~~~~~~~~~~DPdGn-~iEi~~~~~~~~~p~~~~~~~~~~~~  156 (195)
                      .+.|+++.|+  +++++.+..++ .|.+..... ........++..+..|+|. .+.+....                . 
T Consensus         5 ~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~----------------~-   67 (203)
T d1cjxa2           5 VIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEES----------------S-   67 (203)
T ss_dssp             EEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEEC----------------T-
T ss_pred             eeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCC----------------C-
Confidence            3679999998  89999888775 488765432 1222324456666777644 33333310                1 


Q ss_pred             cccchhhhhhhhhhcCCCCCCCcccccccccccc
Q 029305          157 STVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDF  190 (195)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (195)
                      ..-++...+-....-+.|+|+.|.++||.++.+-
T Consensus        68 ~~~sqi~~fl~~~~g~GiqHIAf~vdDI~aav~~  101 (203)
T d1cjxa2          68 KGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDA  101 (203)
T ss_dssp             TCCSHHHHHHHHHTSSBCCEEEEEESCHHHHHHH
T ss_pred             CCccHHHHHHHhcCCCCCceEEEEeCCHHHHHHH
Confidence            1112222222333468999999999999988653

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=89.17  E-value=0.26  Score=35.32  Aligned_cols=96  Identities=9%  Similarity=-0.113  Sum_probs=58.2

Q ss_pred             CCCceEEEEEeC--CHHHHHHHHHh-CCCeEeccce-ec---CCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhh
Q 029305           80 NPKDNHISFQCE--NMAIVERRLKE-MKIDYVKSRV-EE---GGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRI  152 (195)
Q Consensus        80 ~~g~~Hiaf~v~--dl~~~~~~l~~-~gv~~~~~~~-~~---~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~  152 (195)
                      -.++.|+++.|+  +++.+....++ .|........ ++   ......+.-+.+|+|..-.-.+.          .    
T Consensus         4 f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne----------~----   69 (199)
T d1t47a2           4 FQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINE----------P----   69 (199)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEE----------E----
T ss_pred             ceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecc----------c----
Confidence            346899999999  99999988886 4876543221 11   11234666677777653332221          0    


Q ss_pred             cccccccchhhhhhhhhhcCCCCCCCcccccccccccc
Q 029305          153 RSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDF  190 (195)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (195)
                      .+. .+-+.-...-.....+.|+|+.+.++||.++.+-
T Consensus        70 ~~~-~~~s~i~~FL~~~~g~GiQHIAl~tdDI~~av~~  106 (199)
T d1t47a2          70 ALA-KKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRT  106 (199)
T ss_dssp             CCS-SSCCHHHHHHHHHTSCEEEEEEEECSCHHHHHHH
T ss_pred             Ccc-ccccchhhhhhhcCCCcceEEEEEcCCHHHHHHH
Confidence            011 1222222333344578999999999999987653

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.06  E-value=0.42  Score=34.93  Aligned_cols=95  Identities=6%  Similarity=-0.020  Sum_probs=53.8

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-CCCeEecccee----cCCcceEEEEEECCCCC-EEEEEecCCCCCCCCCCcchhhcc
Q 029305           81 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVE----EGGINVDQLFFHDPDGS-MIEICNCDVLPVVPLAGDAVRIRS  154 (195)
Q Consensus        81 ~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~----~~~~~~~~~~~~DPdGn-~iEi~~~~~~~~~p~~~~~~~~~~  154 (195)
                      .++.|+++.|++++++.+.... .|+........    ......++.-+..|+|. .+.+.+.    ..+          
T Consensus        21 ~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~----~~~----------   86 (230)
T d1sqda2          21 RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEP----VHG----------   86 (230)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEE----CCC----------
T ss_pred             CccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEee----cCC----------
Confidence            3478999999999988887764 57665443211    11112355556677763 3444431    111          


Q ss_pred             cccccchhhhhhhhhhcCCCCCCCcccccccccccc
Q 029305          155 CTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDF  190 (195)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (195)
                      . ++.+.-...-....-+.|+|+.+.++||.++.+-
T Consensus        87 ~-~~~sqi~~FL~~~~G~GiQHIAf~tdDI~aav~~  121 (230)
T d1sqda2          87 T-KRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLRE  121 (230)
T ss_dssp             ----CCHHHHHHHHHTSCEEEEEEEEESCHHHHHHH
T ss_pred             C-CCcchHHHHHhhccCCceeEEEEEeCCHHHHHHH
Confidence            1 1111111122233477999999999999887653

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=88.96  E-value=0.48  Score=31.08  Aligned_cols=58  Identities=21%  Similarity=0.290  Sum_probs=39.9

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHh-CCCeEeccceecCCcceEEEEEECCCC---CEEEEEec
Q 029305           80 NPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDG---SMIEICNC  137 (195)
Q Consensus        80 ~~g~~Hiaf~v~dl~~~~~~l~~-~gv~~~~~~~~~~~~~~~~~~~~DPdG---n~iEi~~~  137 (195)
                      -.|++|+++.|.|+++..+-..+ .|.++..........+...+++.+..+   ..+++...
T Consensus         4 i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~   65 (144)
T d1zswa1           4 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEI   65 (144)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEEC
T ss_pred             ccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeeccc
Confidence            35799999999999999999887 799987665333333345556666543   44555443

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.66  E-value=0.47  Score=34.17  Aligned_cols=95  Identities=9%  Similarity=-0.026  Sum_probs=53.5

Q ss_pred             CceEEEEEeCC--HHHHHHHHHh-CCCeEeccc----eecCCcceEEEEEECCCCCEEEEEecCCCCCCCCCCcchhhcc
Q 029305           82 KDNHISFQCEN--MAIVERRLKE-MKIDYVKSR----VEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRS  154 (195)
Q Consensus        82 g~~Hiaf~v~d--l~~~~~~l~~-~gv~~~~~~----~~~~~~~~~~~~~~DPdGn~iEi~~~~~~~~~p~~~~~~~~~~  154 (195)
                      .+.|+++.|++  ++++.+.-++ .|.......    ......+.++..+..|+|..-......      .+        
T Consensus        24 ~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~------~~--------   89 (210)
T d1sqia2          24 IIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEP------AP--------   89 (210)
T ss_dssp             EEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEEC------C---------
T ss_pred             eeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCcccccccccc------CC--------
Confidence            47899999995  9988876653 466543221    111111346777888877543333211      10        


Q ss_pred             cccccchhhhhhhhhhcCCCCCCCccccccccccccc
Q 029305          155 CTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFL  191 (195)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (195)
                      . .+-++-..+-....-+.|+|+.+.++||.++.+-+
T Consensus        90 ~-~~~sqi~~fl~~~~G~GiQHIAf~t~DI~~av~~L  125 (210)
T d1sqia2          90 G-RKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHL  125 (210)
T ss_dssp             -----CHHHHHHHHHTSSEEEEEEEEESCHHHHHHHH
T ss_pred             C-CcccHHHHHHhhcCCCCeeEEEEEcCCHHHHHHHH
Confidence            1 11122122223345789999999999999987654