Citrus Sinensis ID: 029359

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190----
MGGCRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGSCYPGTISGELRLPADVAKENIPREEVSN
ccccHHHHHHHHHHcccccccccccccccccccccccccccEEEEHHHHHHHccccccccccHHHHHHccccEEcccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHcccccccccccccccEEccEEEEEEEEEcccccccccccccccccccccccccccccccccc
ccccHHHHHHHHHcccccccccccccccHHHHHHHccccccEEHHHHHHHHcccccccccccHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHcccccccHHHHHHHHcccccEEEEEEEEcccccccccccccccccccccHHHccccHHcccc
mggcrtlqtavgvfggdgesqtdgidahpsltatatvncppiIAVELCRerlgvhpcdkrrsiseyhslfpaidfkliesEDDKLWKADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNdcqtspnqelcprftnceirSVVIVdqsirgscypgtisgelrlpadvakenipreevsn
MGGCRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHpcdkrrsiseyhslfpAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGSCYpgtisgelrlpadvakenipreevsn
MGGCRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGSCYPGTISGELRLPADVAKENIPREEVSN
********TAVGVFG************HPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGSCYPGTISGELR*****************
*GGCRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGSCYPGTISG********************
MGGCRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGSCYPGTISGELRLPADVAKEN********
***CRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGSCYPGTISGELRLPADV**E*********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGGCRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGSCYPGTISGELRLPADVAKENIPREEVSN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query194
449459558 356 PREDICTED: uncharacterized protein LOC10 0.927 0.505 0.566 7e-57
357466833 335 hypothetical protein MTR_3g111310 [Medic 0.932 0.540 0.573 8e-57
388504292 335 unknown [Medicago truncatula] 0.932 0.540 0.573 9e-57
388499766285 unknown [Medicago truncatula] 0.932 0.635 0.568 6e-56
217072596285 unknown [Medicago truncatula] 0.932 0.635 0.568 7e-56
255554559 338 catalytic, putative [Ricinus communis] g 0.938 0.538 0.565 7e-56
15237708282 phosphoglycerate mutase-like protein [Ar 0.948 0.652 0.564 1e-55
145334899243 phosphoglycerate mutase-like protein [Ar 0.927 0.740 0.561 2e-55
449436930289 PREDICTED: uncharacterized protein C5H10 0.969 0.650 0.544 2e-55
388496658 334 unknown [Lotus japonicus] 0.932 0.541 0.558 2e-55
>gi|449459558|ref|XP_004147513.1| PREDICTED: uncharacterized protein LOC101216588 [Cucumis sativus] gi|449511380|ref|XP_004163940.1| PREDICTED: uncharacterized LOC101216588 [Cucumis sativus] Back     alignment and taxonomy information
 Score =  225 bits (573), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 111/196 (56%), Positives = 137/196 (69%), Gaps = 16/196 (8%)

Query: 5   RTLQTAVGVFGGDGESQTDGIDAHPSLTATA---------TVNCPPIIAVELCRERLGVH 55
           RTLQTAVGVFGG+G   T G+D  P + A A         ++NCPPI AVELCRE LGVH
Sbjct: 144 RTLQTAVGVFGGEG--YTPGMDVLPLMIANAGNSARAAISSLNCPPIAAVELCREHLGVH 201

Query: 56  PCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQEKE 115
           PCDKRR+IS+Y  LFPA+DF LIES++D LWKAD RE  EE+ ARG++F+ WLWTR+EKE
Sbjct: 202 PCDKRRNISDYQFLFPAVDFSLIESDEDVLWKADVRETKEELAARGLQFLNWLWTRKEKE 261

Query: 116 IAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGS-----CYPG 170
           IAVV+H  FL  TL A  NDC     +E+C  F NCE+RS+VIVD+S+ GS      YPG
Sbjct: 262 IAVVTHSGFLFHTLTAFGNDCHPLVKKEICKHFANCELRSIVIVDRSMVGSDSSTTNYPG 321

Query: 171 TISGELRLPADVAKEN 186
            +   L +P+D   +N
Sbjct: 322 KVPSGLDIPSDAVDDN 337

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|357466833|ref|XP_003603701.1| hypothetical protein MTR_3g111310 [Medicago truncatula] gi|355492749|gb|AES73952.1| hypothetical protein MTR_3g111310 [Medicago truncatula] Back     alignment and taxonomy information
>gi|388504292|gb|AFK40212.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|388499766|gb|AFK37949.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|217072596|gb|ACJ84658.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|255554559|ref|XP_002518318.1| catalytic, putative [Ricinus communis] gi|223542538|gb|EEF44078.1| catalytic, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15237708|ref|NP_201251.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi|30698022|ref|NP_851266.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi|79332177|ref|NP_001032138.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi|79332197|ref|NP_001032139.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi|145334897|ref|NP_001078794.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi|334188621|ref|NP_001190613.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi|10178227|dbj|BAB11607.1| ZW10-like protein [Arabidopsis thaliana] gi|24030311|gb|AAN41324.1| putative ZW10 protein [Arabidopsis thaliana] gi|222423885|dbj|BAH19906.1| AT5G64460 [Arabidopsis thaliana] gi|332010512|gb|AED97895.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi|332010513|gb|AED97896.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi|332010514|gb|AED97897.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi|332010515|gb|AED97898.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi|332010517|gb|AED97900.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi|332010519|gb|AED97902.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|145334899|ref|NP_001078795.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi|332010518|gb|AED97901.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449436930|ref|XP_004136245.1| PREDICTED: uncharacterized protein C5H10.03-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|388496658|gb|AFK36395.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query194
TAIR|locus:2179381282 AT5G64460 "AT5G64460" [Arabido 0.927 0.638 0.568 6.3e-53
TAIR|locus:2827577271 AT2G17280 "AT2G17280" [Arabido 0.896 0.642 0.502 5e-44
TAIR|locus:504956275231 AT1G09935 [Arabidopsis thalian 0.768 0.645 0.555 5.2e-42
TAIR|locus:2016640343 AT1G58280 [Arabidopsis thalian 0.680 0.384 0.510 5.9e-42
TAIR|locus:1005716755260 AT1G09932 "AT1G09932" [Arabido 0.762 0.569 0.496 2.1e-36
ASPGD|ASPL0000072665329 AN4653 [Emericella nidulans (t 0.520 0.306 0.320 1.6e-05
TAIR|locus:2179381 AT5G64460 "AT5G64460" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 112/197 (56%), Positives = 137/197 (69%)

Query:     5 RTLQTAVGVFGGDGESQTDGIDAHPSLTATA---------TVNCPPIIAVELCRERLGVH 55
             RTLQTAVGVFGG+G   TD  D  P + A A         ++NCPP+I  E CRE LGVH
Sbjct:    83 RTLQTAVGVFGGEG--YTDMSDVLPLMVANAGNSSRAAISSLNCPPVITEESCREHLGVH 140

Query:    56 PCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQEKE 115
             PCD+RRSIS+Y  LFPA+DF LIESE+DKLWKAD RE  EE+ ARG +F+ WLWTR+EKE
Sbjct:   141 PCDQRRSISDYQFLFPAVDFSLIESEEDKLWKADVRETIEELAARGKKFLNWLWTRKEKE 200

Query:   116 IAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGSC-----YPG 170
             IA+V+H  FL  TLNAL N+C     +E+C  F NCE+RS+VIVD+S+ GS      YPG
Sbjct:   201 IAIVTHSGFLFHTLNALQNECHPDVKKEICGHFANCELRSMVIVDRSMLGSDSSVTDYPG 260

Query:   171 TISGELRLPAD-VAKEN 186
              I   + LP+D V  +N
Sbjct:   261 KIPKGIDLPSDAVVDDN 277
GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0005829 "cytosol" evidence=IDA
GO:0009736 "cytokinin mediated signaling pathway" evidence=RCA
TAIR|locus:2827577 AT2G17280 "AT2G17280" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504956275 AT1G09935 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016640 AT1G58280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:1005716755 AT1G09932 "AT1G09932" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000072665 AN4653 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
AT5G64460
unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Phosphoglycerate mutase (InterPro-IPR013078); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G58280.3); Has 385 Blast hits to 382 proteins in 84 species- Archae - 0; Bacteria - 19; Metazoa - 2; Fungi - 201; Plants - 67; Viruses - 0; Other Eukaryotes - 96 (source- NCBI BLink). (282 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT1G16880
uridylyltransferase-related; uridylyltransferase-related; INVOLVED IN- response to cold; LOCATE [...] (290 aa)
   •  • 0.933
AT4G15545
unknown protein; unknown protein; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growt [...] (337 aa)
   •  • 0.926
AT3G30840
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (58 aa)
      • 0.889
AT4G09520
catalytic/ metal ion binding / phosphoglycerate mutase; catalytic/ metal ion binding / phosphog [...] (492 aa)
      • 0.871
AT5G04740
ACT domain-containing protein; ACT domain-containing protein; FUNCTIONS IN- amino acid binding; [...] (301 aa)
      • 0.871
AT3G50520
phosphoglycerate/bisphosphoglycerate mutase family protein; phosphoglycerate/bisphosphoglycerat [...] (230 aa)
      • 0.784
ATMTK
ATMTK (ARABIDOPSIS THALIANA S-METHYL-5-THIORIBOSE KINASE); S-methyl-5-thioribose kinase; encode [...] (420 aa)
      • 0.780
AT1G78050.1-P
PGM (PHOSPHOGLYCERATE/BISPHOSPHOGLYCERATE MUTASE); catalytic/ intramolecular transferase, phosp [...] (332 aa)
      • 0.748
AT5G04120
phosphoglycerate/bisphosphoglycerate mutase family protein; phosphoglycerate/bisphosphoglycerat [...] (238 aa)
      • 0.744
AT3G08590
2,3-biphosphoglycerate-independent phosphoglycerate mutase, putative / phosphoglyceromutase, pu [...] (560 aa)
      • 0.720

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query194
pfam00300154 pfam00300, His_Phos_1, Histidine phosphatase super 0.001
>gnl|CDD|215845 pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1) Back     alignment and domain information 
 Score = 37.4 bits (87), Expect = 0.001
 Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 81  EDDKLWKADAREPFEEVTARGMEFMKWLW-TRQEKEIAVVSHGIFL 125
           ED   ++    E   +V  R    ++ L        + +VSHG  +
Sbjct: 106 EDPADFRPPGGESLADVYERVEAALEELLAKHPGGNVLIVSHGGVI 151

The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Length = 154

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 194
KOG4754248 consensus Predicted phosphoglycerate mutase [Carbo 99.91
PRK13463203 phosphatase PhoE; Provisional 99.91
PRK14116228 gpmA phosphoglyceromutase; Provisional 99.91
PRK14119228 gpmA phosphoglyceromutase; Provisional 99.9
PRK15004199 alpha-ribazole phosphatase; Provisional 99.9
PRK14117230 gpmA phosphoglyceromutase; Provisional 99.9
PRK14118227 gpmA phosphoglyceromutase; Provisional 99.89
TIGR03162177 ribazole_cobC alpha-ribazole phosphatase. Members 99.89
PRK14120249 gpmA phosphoglyceromutase; Provisional 99.89
PRK03482215 phosphoglycerate mutase; Provisional 99.88
TIGR03848204 MSMEG_4193 probable phosphomutase, MSMEG_4193 fami 99.88
TIGR01258245 pgm_1 phosphoglycerate mutase, BPG-dependent, fami 99.88
PRK13462203 acid phosphatase; Provisional 99.88
PRK01112228 phosphoglyceromutase; Provisional 99.88
PTZ00123236 phosphoglycerate mutase like-protein; Provisional 99.87
PRK01295206 phosphoglyceromutase; Provisional 99.87
PRK14115247 gpmA phosphoglyceromutase; Provisional 99.87
PRK07238372 bifunctional RNase H/acid phosphatase; Provisional 99.86
COG0406208 phoE Broad specificity phosphatase PhoE and relate 99.86
PTZ00322664 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas 99.79
PF00300158 His_Phos_1: Histidine phosphatase superfamily (bra 99.71
smart00855155 PGAM Phosphoglycerate mutase family. Phosphoglycer 99.68
PTZ00122299 phosphoglycerate mutase; Provisional 99.55
KOG0235214 consensus Phosphoglycerate mutase [Carbohydrate tr 99.49
cd07067153 HP_PGM_like Histidine phosphatase domain found in 99.3
COG0588230 GpmA Phosphoglycerate mutase 1 [Carbohydrate trans 99.29
KOG0234438 consensus Fructose-6-phosphate 2-kinase/fructose-2 98.94
cd07040153 HP Histidine phosphatase domain found in a functio 98.82
KOG3734272 consensus Predicted phosphoglycerate mutase [Carbo 98.53
KOG4609284 consensus Predicted phosphoglycerate mutase [Gener 98.48
TIGR00249152 sixA phosphohistidine phosphatase SixA. 97.78
PRK10848159 phosphohistidine phosphatase; Provisional 97.02
PRK15416201 lipopolysaccharide core heptose(II)-phosphate phos 96.73
PRK06193206 hypothetical protein; Provisional 94.18
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=99.91  E-value=2.6e-24  Score=172.60  Aligned_cols=166  Identities=48%  Similarity=0.743  Sum_probs=136.1

Q ss_pred             cchhHHHHHHHhhCCCCCCCCCCCCCCCcccccccCCCCCeeeccchhhhcCCCCCCCCCCHHHHHhhCCCCCccccccc
Q 029359            2 GGCRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESE   81 (194)
Q Consensus         2 ~L~RA~qTA~ii~~~~~~~~~~~~~~~p~~~~~~~~~~~pi~~~~~LrE~~g~~~~~eG~~~~el~~~~P~~~~~~~~~~   81 (194)
                      ||+||+|||.+.|+..  .+.++.+..|+|++      +|++  ..|||.+|.++||.|+.++++++.||.+||+....+
T Consensus        79 PMrRtLqT~v~~f~~~--~~e~g~~~~p~~vs------p~~i--~~~rE~lG~hpCD~r~~v~~~~~lfp~~DFs~~~~d  148 (248)
T KOG4754|consen   79 PMRRTLQTMVIAFGGY--LAEDGEDPAPVKVS------PPFI--AVCRETLGDHPCDRRSSVTDLMKLFPAYDFSLCETD  148 (248)
T ss_pred             hHHHHHHHHHHHhcce--eccCCCcCCceeec------chHH--HHHHHHhCCCcccccchhHHHHhhcccccceeeccC
Confidence            7999999999999986  34555444455441      2222  226998899999999999999999999999988777


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCEEEEEechHHHHHHHHHHhcCCCCCCCCCCCCCccCceEEEEEEecC
Q 029359           82 DDKLWKADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQ  161 (194)
Q Consensus        82 ~~~~~~~~~gEs~~~v~~R~~~fL~~l~~~~~~~IlVVSHGg~Ir~ll~~l~~~~~~~~~~~~~~~~~Ncsit~i~~~~~  161 (194)
                      .+..|.+...|+.+....|.+.|++|+.+++++.|+||||+++|+.++..+...++.++... ...+.||+.+.+.+-|.
T Consensus       149 v~~~~~pdy~ed~e~~a~r~re~~~~l~~r~ek~iavvths~fl~~llk~i~k~cd~dv~~~-~~~~~Nce~r~~~i~Dr  227 (248)
T KOG4754|consen  149 VDPLKKPDYREDDEESAARSREFLEWLAKRPEKEIAVVTHSGFLRSLLKKIQKDCDPDVKPE-ILSFSNCEHRSFVIVDR  227 (248)
T ss_pred             cchhccCcchhhHHHHHHhHHHHHHHHHhCccceEEEEEehHHHHHHHHHhccccCcccchh-hhccCCCcCCceeEeee
Confidence            77888888899999999999999999999999999999999999999999988777766321 23468999998877665


Q ss_pred             cccCC----CCCCCCCCCCCC
Q 029359          162 SIRGS----CYPGTISGELRL  178 (194)
Q Consensus       162 ~~~~~----~~~~~~~~~~~~  178 (194)
                      +-.+.    +|||.++.+.|+
T Consensus       228 ~~~~~d~~~n~p~~~~~~~~~  248 (248)
T KOG4754|consen  228 GMLGTDSVTNVPGKIADGGDL  248 (248)
T ss_pred             eeeccccceecCCcccCcCCC
Confidence            55554    899999998874

>PRK13463 phosphatase PhoE; Provisional Back     alignment and domain information
>PRK14116 gpmA phosphoglyceromutase; Provisional Back     alignment and domain information
>PRK14119 gpmA phosphoglyceromutase; Provisional Back     alignment and domain information
>PRK15004 alpha-ribazole phosphatase; Provisional Back     alignment and domain information
>PRK14117 gpmA phosphoglyceromutase; Provisional Back     alignment and domain information
>PRK14118 gpmA phosphoglyceromutase; Provisional Back     alignment and domain information
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase Back     alignment and domain information
>PRK14120 gpmA phosphoglyceromutase; Provisional Back     alignment and domain information
>PRK03482 phosphoglycerate mutase; Provisional Back     alignment and domain information
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family Back     alignment and domain information
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1 Back     alignment and domain information
>PRK13462 acid phosphatase; Provisional Back     alignment and domain information
>PRK01112 phosphoglyceromutase; Provisional Back     alignment and domain information
>PTZ00123 phosphoglycerate mutase like-protein; Provisional Back     alignment and domain information
>PRK01295 phosphoglyceromutase; Provisional Back     alignment and domain information
>PRK14115 gpmA phosphoglyceromutase; Provisional Back     alignment and domain information
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional Back     alignment and domain information
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] Back     alignment and domain information
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional Back     alignment and domain information
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle Back     alignment and domain information
>smart00855 PGAM Phosphoglycerate mutase family Back     alignment and domain information
>PTZ00122 phosphoglycerate mutase; Provisional Back     alignment and domain information
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction Back     alignment and domain information
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction Back     alignment and domain information
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only] Back     alignment and domain information
>TIGR00249 sixA phosphohistidine phosphatase SixA Back     alignment and domain information
>PRK10848 phosphohistidine phosphatase; Provisional Back     alignment and domain information
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional Back     alignment and domain information
>PRK06193 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query194
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-06
1v37_A177 Phosphoglycerate mutase; riken structu genomics/pr 2e-04
3hjg_A213 Putative alpha-ribazole-5'-phosphate phosphatase C 6e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 44.8 bits (105), Expect = 7e-06
 Identities = 32/180 (17%), Positives = 50/180 (27%), Gaps = 66/180 (36%)

Query: 3   GCRTLQTA--VGVF---GGDGESQTDGIDAHPSLTATAT-------VNCPPIIAVELCRE 50
            C+ L T     V         +         +LT           ++C P    +L RE
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP---QDLPRE 321

Query: 51  RLGVHP------------------------CDKRRSISE--------------YHSL--F 70
            L  +P                        CDK  +I E              +  L  F
Sbjct: 322 VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF 381

Query: 71  PA---IDFKLIESEDDKLWKADAREPFEEVTARGMEFMKW-LWTRQEKEIAVVSHGIFLQ 126
           P    I   L+      +W    +     V     +  K+ L  +Q KE  +    I+L+
Sbjct: 382 PPSAHIPTILLS----LIWFDVIKSDVMVVVN---KLHKYSLVEKQPKESTISIPSIYLE 434
>1v37_A Phosphoglycerate mutase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.40A {Thermus thermophilus} SCOP: c.60.1.1 PDB: 1v7q_A 2hia_A 2pa0_A 2p2y_A 2p77_A 2p6m_A 2p9y_A 2p30_A 2ekz_A 2p9f_A 2p79_A 2p78_A 2p2z_A 2p75_A 2owe_A 2enu_A 2ekb_A 2p6o_A 2owd_A 2enw_A ... Length = 177 Back     alignment and structure
>3hjg_A Putative alpha-ribazole-5'-phosphate phosphatase COBC; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.80A {Vibrio parahaemolyticus} Length = 213 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query194
1h2e_A207 Phosphatase, YHFR; hydrolase, broad specificity ph 99.91
3hjg_A213 Putative alpha-ribazole-5'-phosphate phosphatase C 99.89
1fzt_A211 Phosphoglycerate mutase; open B-sheet-helices, iso 99.89
3gp3_A257 2,3-bisphosphoglycerate-dependent phosphoglycerat; 99.89
3kkk_A258 Phosphoglycerate mutase; PGAM, glycolysis, malaria 99.88
4emb_A274 2,3-bisphosphoglycerate-dependent phosphoglycerat; 99.87
2hhj_A267 Bisphosphoglycerate mutase; isomerase; HET: NEP DG 99.87
1qhf_A240 Protein (phosphoglycerate mutase); transferase (ph 99.87
4eo9_A268 2,3-bisphosphoglycerate-dependent phosphoglycerat; 99.86
3r7a_A237 Phosphoglycerate mutase, putative; structural geno 99.86
2a6p_A208 Possible phosphoglycerate mutase GPM2; predicted p 99.86
3d8h_A267 Glycolytic phosphoglycerate mutase; structural gen 99.86
1e58_A249 Phosphoglycerate mutase; phosphohistidine, glycoly 99.86
2qni_A219 AGR_C_517P, uncharacterized protein ATU0299; MCSG, 99.85
1yfk_A262 Phosphoglycerate mutase 1; alpha/beta, isomerase, 99.85
3e9c_A265 ZGC:56074; histidine phosphatase, hydrolase; 2.00A 99.84
1rii_A265 2,3-bisphosphoglycerate-dependent phosphoglycerat; 99.84
3c7t_A263 Ecdysteroid-phosphate phosphatase; ecdysone, 2H-ph 99.83
1v37_A177 Phosphoglycerate mutase; riken structu genomics/pr 99.82
3d4i_A273 STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domai 99.81
3f3k_A265 Uncharacterized protein YKR043C; structural genomi 99.8
3dcy_A275 Regulator protein; OMIM 610775, C12ORF5, tigar, TP 99.79
2axn_A520 6-phosphofructo-2-kinase/fructose-2,6- biphosphata 99.77
1bif_A469 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; 99.76
3mbk_A264 Ubiquitin-associated and SH3 domain-containing PR; 99.76
3eoz_A214 Putative phosphoglycerate mutase; PGAM, malaria, s 99.74
3mxo_A202 Serine/threonine-protein phosphatase PGAM5, mitoc; 99.73
1ujc_A161 Phosphohistidine phosphatase SIXA; alpha-beta fold 99.17
2rfl_A173 Putative phosphohistidine phosphatase SIXA; alpha- 98.96
3fjy_A364 Probable MUTT1 protein; dimer, protein structure i 98.62
3f2i_A172 ALR0221 protein; alpha-beta protein, structural ge 97.86
>1h2e_A Phosphatase, YHFR; hydrolase, broad specificity phosphatase, DPGM homolog; 1.69A {Bacillus stearothermophilus} SCOP: c.60.1.1 PDB: 1h2f_A* 1ebb_A Back     alignment and structure
Probab=99.91  E-value=2.3e-24  Score=173.13  Aligned_cols=132  Identities=20%  Similarity=0.241  Sum_probs=109.8

Q ss_pred             cchhHHHHHHHhhCCCCCCCCCCCCCCCcccccccCCCCCeeeccchhhhcCCCCCCCCCCHHHHHhhCCCCCccccccc
Q 029359            2 GGCRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESE   81 (194)
Q Consensus         2 ~L~RA~qTA~ii~~~~~~~~~~~~~~~p~~~~~~~~~~~pi~~~~~LrE~~g~~~~~eG~~~~el~~~~P~~~~~~~~~~   81 (194)
                      ||+||+|||+++++..+                     +|++++++|+|+.  +|.|+|++.+++.+.||+. |..|..+
T Consensus        55 pl~Ra~qTA~~i~~~~~---------------------~~~~~~~~L~E~~--~G~~eg~~~~e~~~~~p~~-~~~~~~~  110 (207)
T 1h2e_A           55 TSGRALETAEIVRGGRL---------------------IPIYQDERLREIH--LGDWEGKTHDEIRQMDPIA-FDHFWQA  110 (207)
T ss_dssp             SSHHHHHHHHHHHTTCS---------------------CCEEECGGGSCCC--CGGGTTCBHHHHHHHCHHH-HHHHHHC
T ss_pred             ccHHHHHHHHHHHhcCC---------------------CCeEECcccccCC--ceecCCCCHHHHHHHCHHH-HHHHhhC
Confidence            79999999999998762                     5788999999983  5679999999999999964 5555544


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHc-CCCCEEEEEechHHHHHHHHHHhcCCCCCCCCCCCCC-ccCceEEEEEEe
Q 029359           82 DDKLWKADAREPFEEVTARGMEFMKWLWT-RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPR-FTNCEIRSVVIV  159 (194)
Q Consensus        82 ~~~~~~~~~gEs~~~v~~R~~~fL~~l~~-~~~~~IlVVSHGg~Ir~ll~~l~~~~~~~~~~~~~~~-~~Ncsit~i~~~  159 (194)
                      + ..+.+|+|||+.++.+|+..+++++.+ +++++|+|||||++|+++++.+++.+...+   +... +.||+++.++++
T Consensus       111 ~-~~~~~p~gEs~~~~~~R~~~~l~~l~~~~~~~~vlvVsHg~~i~~l~~~l~~~~~~~~---~~~~~~~n~~i~~l~~~  186 (207)
T 1h2e_A          111 P-HLYAPQRGERFCDVQQRALEAVQSIVDRHEGETVLIVTHGVVLKTLMAAFKDTPLDHL---WSPPYMYGTSVTIIEVD  186 (207)
T ss_dssp             G-GGCCCSSSCCHHHHHHHHHHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHTTCCGGGT---TCSCCCCTTCEEEEEEE
T ss_pred             c-cccCCCCCccHHHHHHHHHHHHHHHHHhCCCCeEEEEcCHHHHHHHHHHHhCCCHHHh---hhccCCCCCEEEEEEEE
Confidence            3 346678999999999999999999985 457899999999999999999987654443   2456 899999999997


Q ss_pred             cC
Q 029359          160 DQ  161 (194)
Q Consensus       160 ~~  161 (194)
                      ++
T Consensus       187 ~~  188 (207)
T 1h2e_A          187 GG  188 (207)
T ss_dssp             TT
T ss_pred             CC
Confidence            64
>3hjg_A Putative alpha-ribazole-5'-phosphate phosphatase COBC; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.80A {Vibrio parahaemolyticus} Back     alignment and structure
>1fzt_A Phosphoglycerate mutase; open B-sheet-helices, isomerase; NMR {Schizosaccharomyces pombe} SCOP: c.60.1.1 Back     alignment and structure
>3gp3_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; phosphoglyceromutase, decode, SBRI, niaid, UWPPG, glycolysis isomerase; HET: PG4 SEP; 1.50A {Burkholderia pseudomallei} SCOP: c.60.1.1 PDB: 3fdz_A* 3ezn_A* 3gp5_A* 3gw8_A* 3lnt_A Back     alignment and structure
>3kkk_A Phosphoglycerate mutase; PGAM, glycolysis, malaria, structural genomics, medical STRU genomics of pathogenic protozoa, MSGPP; 2.08A {Plasmodium falciparum 3D7} PDB: 1xq9_A Back     alignment and structure
>4emb_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.30A {Borrelia burgdorferi} Back     alignment and structure
>2hhj_A Bisphosphoglycerate mutase; isomerase; HET: NEP DG2 3PG; 1.50A {Homo sapiens} SCOP: c.60.1.1 PDB: 1t8p_A* 2f90_A* 2a9j_A* 2h4z_A* 2h52_A* 2h4x_A* 3nfy_A Back     alignment and structure
>1qhf_A Protein (phosphoglycerate mutase); transferase (phosphoryl); HET: 3PG; 1.70A {Saccharomyces cerevisiae} SCOP: c.60.1.1 PDB: 5pgm_D 1bq3_D* 1bq4_D 4pgm_A 3pgm_A* Back     alignment and structure
>4eo9_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.45A {Mycobacterium leprae} Back     alignment and structure
>3r7a_A Phosphoglycerate mutase, putative; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE EPE; 1.84A {Bacillus anthracis} Back     alignment and structure
>2a6p_A Possible phosphoglycerate mutase GPM2; predicted phosphoglycerate mutase, structural genomics, PSI, structure initiative; 2.20A {Mycobacterium tuberculosis} Back     alignment and structure
>3d8h_A Glycolytic phosphoglycerate mutase; structural genomics, malaria, glycolysis, I structural genomics consortium, SGC; 2.01A {Cryptosporidium parvum} Back     alignment and structure
>1e58_A Phosphoglycerate mutase; phosphohistidine, glycolysis and gluconeogenesis, isomerase; HET: NEP; 1.25A {Escherichia coli} SCOP: c.60.1.1 PDB: 1e59_A* Back     alignment and structure
>2qni_A AGR_C_517P, uncharacterized protein ATU0299; MCSG, in SITU proteolysis, structural genomics, PSI protein structure initiative; 1.80A {Agrobacterium tumefaciens str} Back     alignment and structure
>1yfk_A Phosphoglycerate mutase 1; alpha/beta, isomerase, hydrolase; HET: CIT; 2.70A {Homo sapiens} PDB: 1yjx_A* Back     alignment and structure
>3e9c_A ZGC:56074; histidine phosphatase, hydrolase; 2.00A {Danio rerio} PDB: 3e9d_A 3e9e_A Back     alignment and structure
>1rii_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; phosphoglyerate mutase, SH3 domain binding, structural genom TBSGC; 1.70A {Mycobacterium tuberculosis} SCOP: c.60.1.1 Back     alignment and structure
>3c7t_A Ecdysteroid-phosphate phosphatase; ecdysone, 2H-phosphatase, PGM, hydrolase; 1.76A {Bombyx mori} Back     alignment and structure
>1v37_A Phosphoglycerate mutase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.40A {Thermus thermophilus} SCOP: c.60.1.1 PDB: 1v7q_A 2hia_A 2pa0_A 2p2y_A 2p77_A 2p6m_A 2p9y_A 2p30_A 2ekz_A 2p9f_A 2p79_A 2p78_A 2p2z_A 2p75_A 2owe_A 2enu_A 2ekb_A 2p6o_A 2owd_A 2enw_A ... Back     alignment and structure
>3d4i_A STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domain, hydrolase; 1.95A {Mus musculus} PDB: 3d6a_A 3db1_A Back     alignment and structure
>3f3k_A Uncharacterized protein YKR043C; structural genomics,, PSI-2, prote structure initiative; 1.75A {Saccharomyces cerevisiae} PDB: 3lg2_A 3oi7_A* 3ll4_A* Back     alignment and structure
>3dcy_A Regulator protein; OMIM 610775, C12ORF5, tigar, TP53-induced glycolysis and apoptosis regulator, CAsp target, structural genomics medical relevance; HET: MSE; 1.75A {Homo sapiens} Back     alignment and structure
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A* Back     alignment and structure
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A Back     alignment and structure
>3mbk_A Ubiquitin-associated and SH3 domain-containing PR; PGM, STS-1, signaling protein, low PH, alternative splicing, cytoplasm, nucleus, phosphoprotein; 1.35A {Mus musculus} PDB: 2ikq_A 2h0q_A Back     alignment and structure
>3eoz_A Putative phosphoglycerate mutase; PGAM, malaria, structural genomics, isomerase, structural GE consortium, SGC; 2.40A {Plasmodium falciparum} Back     alignment and structure
>3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate mutase family member 5, BXLBV68, MGC protein, structural genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo sapiens} PDB: 3o0t_A Back     alignment and structure
>1ujc_A Phosphohistidine phosphatase SIXA; alpha-beta fold, hydrolase; 1.90A {Escherichia coli} PDB: 1ujb_A Back     alignment and structure
>2rfl_A Putative phosphohistidine phosphatase SIXA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 2.35A {Agrobacterium tumefaciens str} Back     alignment and structure
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID} Back     alignment and structure
>3f2i_A ALR0221 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG, function; 2.00A {Nostoc SP} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query194
d1h2ea_207 Broad specificity phosphatase PhoE (YhfR) {Bacillu 99.92
d1fzta_211 Phosphoglycerate mutase {Fission yeast (Schizosacc 99.87
d1e58a_247 Phosphoglycerate mutase {Escherichia coli [TaxId: 99.84
d1bifa2219 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata 99.82
d1riia_243 Phosphoglycerate mutase {Mycobacterium tuberculosi 99.8
d1v37a_171 Alpha-ribazole-5'-phosphate phosphatase {Thermus t 99.8
d1xq9a_241 Phosphoglycerate mutase {Plasmodium falciparum [Ta 99.78
d2hhja1248 Phosphoglycerate mutase {Human (Homo sapiens) [Tax 99.78
d1qhfa_240 Phosphoglycerate mutase {Baker's yeast (Saccharomy 99.71
d1b74a1105 Glutamate racemase {Aquifex pyrophilus [TaxId: 271 84.81
>d1h2ea_ c.60.1.1 (A:) Broad specificity phosphatase PhoE (YhfR) {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphoglycerate mutase-like
superfamily: Phosphoglycerate mutase-like
family: Cofactor-dependent phosphoglycerate mutase
domain: Broad specificity phosphatase PhoE (YhfR)
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=3.5e-25  Score=175.50  Aligned_cols=133  Identities=20%  Similarity=0.222  Sum_probs=110.0

Q ss_pred             cchhHHHHHHHhhCCCCCCCCCCCCCCCcccccccCCCCCeeeccchhhhcCCCCCCCCCCHHHHHhhCCCCCccccccc
Q 029359            2 GGCRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESE   81 (194)
Q Consensus         2 ~L~RA~qTA~ii~~~~~~~~~~~~~~~p~~~~~~~~~~~pi~~~~~LrE~~g~~~~~eG~~~~el~~~~P~~~~~~~~~~   81 (194)
                      ||+||+|||++++...+                     +|++++++|+|+.  +|.|+|++.+++++.||.. +..+..+
T Consensus        55 pl~Ra~qTa~~i~~~~~---------------------~~~~~~~~L~E~~--~g~~~g~~~~e~~~~~~~~-~~~~~~~  110 (207)
T d1h2ea_          55 TSGRALETAEIVRGGRL---------------------IPIYQDERLREIH--LGDWEGKTHDEIRQMDPIA-FDHFWQA  110 (207)
T ss_dssp             SSHHHHHHHHHHHTTCS---------------------CCEEECGGGSCCC--CGGGTTCBHHHHHHHCHHH-HHHHHHC
T ss_pred             ccHHHHHHHhhhccccc---------------------ccccccccccccC--CCccccccccccccccccc-ccccccC
Confidence            79999999999998762                     6889999999973  5679999999999999864 4444433


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHc-CCCCEEEEEechHHHHHHHHHHhcCCCCCCCCCCCCCccCceEEEEEEec
Q 029359           82 DDKLWKADAREPFEEVTARGMEFMKWLWT-RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVD  160 (194)
Q Consensus        82 ~~~~~~~~~gEs~~~v~~R~~~fL~~l~~-~~~~~IlVVSHGg~Ir~ll~~l~~~~~~~~~~~~~~~~~Ncsit~i~~~~  160 (194)
                      + ..+.+++|||+.++..|+..++++|.+ +++++|+|||||++|+++++.+++.+...++.  ...+.|||++++++.+
T Consensus       111 ~-~~~~~~~gEs~~~~~~Rv~~~l~~l~~~~~~~~vlvVsHg~~i~~l~~~l~~~~~~~~~~--~~~~~n~sit~~~~~~  187 (207)
T d1h2ea_         111 P-HLYAPQRGERFCDVQQRALEAVQSIVDRHEGETVLIVTHGVVLKTLMAAFKDTPLDHLWS--PPYMYGTSVTIIEVDG  187 (207)
T ss_dssp             G-GGCCCSSSCCHHHHHHHHHHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHTTCCGGGTTC--SCCCCTTCEEEEEEET
T ss_pred             C-ccccccCCcccccccccchhHHHhhhhccCCCeEEEEECHHHHHHHHHHHhCCCHHHHhh--ccCCCCceEEEEEEEC
Confidence            2 456678999999999999999999985 66789999999999999999999876555431  2357999999999966


Q ss_pred             C
Q 029359          161 Q  161 (194)
Q Consensus       161 ~  161 (194)
                      +
T Consensus       188 ~  188 (207)
T d1h2ea_         188 G  188 (207)
T ss_dssp             T
T ss_pred             C
Confidence            4
>d1fzta_ c.60.1.1 (A:) Phosphoglycerate mutase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
>d1e58a_ c.60.1.1 (A:) Phosphoglycerate mutase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bifa2 c.60.1.4 (A:250-468) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1riia_ c.60.1.1 (A:) Phosphoglycerate mutase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1v37a_ c.60.1.1 (A:) Alpha-ribazole-5'-phosphate phosphatase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1xq9a_ c.60.1.1 (A:) Phosphoglycerate mutase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d2hhja1 c.60.1.1 (A:3-250) Phosphoglycerate mutase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qhfa_ c.60.1.1 (A:) Phosphoglycerate mutase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]} Back     information, alignment and structure