Citrus Sinensis ID: 029443


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---
MVHADGSVIKSWDYLRQNGLQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVEALSYFCF
cccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEccccccccccEEEcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccccccccccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
ccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEccccccccccccEEcHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEHHcHcccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccc
mvhadgsviKSWDYLRQNGLqgfidiwpiPTAVAWKLIACFGAFEAALQLLlpgkrvegpisptghrpvykangvASYAVTLITYLSLWwfgifnptivYDHLGEIYSALIFGSFIFCIFLYIkghlapsstdsgscgniiidfywgmelyprigknfdIKVFTNCRFGMMSWAVLAVTYCIKQVEALSYFCF
mvhadgsvikSWDYLRQNGLQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVEALSYFCF
MVHADGSVIKSWDYLRQNGLQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVEALSYFCF
******SVIKSWDYLRQNGLQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVEALSYFC*
MVHADGSVIKSWDYLRQNGLQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVEALSYFC*
MVHADGSVIKSWDYLRQNGLQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVEALSYFCF
****DGSVIKSWDYLRQNGLQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVEALSYFCF
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooo
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooo
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooo
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MVHADGSVIKSWDYLRQNGLQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVEALSYFCF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query193 2.2.26 [Sep-21-2011]
Q9LDU6 432 7-dehydrocholesterol redu yes no 0.963 0.430 0.806 2e-87
Q54PP1 462 Delta(14)-sterol reductas yes no 0.849 0.354 0.317 4e-15
O88455 471 7-dehydrocholesterol redu yes no 0.870 0.356 0.327 5e-15
Q9Z2Z8 471 7-dehydrocholesterol redu yes no 0.870 0.356 0.322 5e-15
Q5E9J5 475 7-dehydrocholesterol redu yes no 0.860 0.349 0.313 2e-14
Q7ZXH1 473 7-dehydrocholesterol redu N/A no 0.834 0.340 0.307 8e-14
Q6P4M0 473 7-dehydrocholesterol redu no no 0.839 0.342 0.292 2e-13
Q7SXF1 478 7-dehydrocholesterol redu yes no 0.896 0.361 0.280 1e-12
Q9UBM7 475 7-dehydrocholesterol redu yes no 0.854 0.347 0.306 2e-12
P38670 490 Delta(14)-sterol reductas N/A no 0.865 0.340 0.312 1e-10
>sp|Q9LDU6|ST7R_ARATH 7-dehydrocholesterol reductase OS=Arabidopsis thaliana GN=DWF5 PE=1 SV=1 Back     alignment and function desciption
 Score =  321 bits (822), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 150/186 (80%), Positives = 169/186 (90%)

Query: 1   MVHADGSVIKSWDYLRQNGLQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGP 60
           MVH DGSV +++ +  +NG+QG I+IWP PT +AWK+I C+GAFEA LQLLLPGKRVEGP
Sbjct: 33  MVHQDGSVTQTFGFFWENGVQGLINIWPRPTLIAWKIIFCYGAFEAILQLLLPGKRVEGP 92

Query: 61  ISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIF 120
           ISP G+RPVYKANG+A+Y VTL TYL LWWFGIFNP IVYDHLGEI+SALIFGSFIFC+ 
Sbjct: 93  ISPAGNRPVYKANGLAAYFVTLATYLGLWWFGIFNPAIVYDHLGEIFSALIFGSFIFCVL 152

Query: 121 LYIKGHLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTY 180
           LYIKGH+APSS+DSGSCGN+IIDFYWGMELYPRIGK+FDIKVFTNCRFGMMSWAVLAVTY
Sbjct: 153 LYIKGHVAPSSSDSGSCGNLIIDFYWGMELYPRIGKSFDIKVFTNCRFGMMSWAVLAVTY 212

Query: 181 CIKQVE 186
           CIKQ E
Sbjct: 213 CIKQYE 218




Production of cholesterol by reduction of C7-C8 double bond of 7-dehydrocholesterol (7-DHC). Lesions in the gene coding for the enzyme cause dwarfism.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 2EC: 1
>sp|Q54PP1|ERG24_DICDI Delta(14)-sterol reductase OS=Dictyostelium discoideum GN=erg24 PE=3 SV=1 Back     alignment and function description
>sp|O88455|DHCR7_MOUSE 7-dehydrocholesterol reductase OS=Mus musculus GN=Dhcr7 PE=2 SV=1 Back     alignment and function description
>sp|Q9Z2Z8|DHCR7_RAT 7-dehydrocholesterol reductase OS=Rattus norvegicus GN=Dhcr7 PE=2 SV=1 Back     alignment and function description
>sp|Q5E9J5|DHCR7_BOVIN 7-dehydrocholesterol reductase OS=Bos taurus GN=DHCR7 PE=2 SV=1 Back     alignment and function description
>sp|Q7ZXH1|DHCR7_XENLA 7-dehydrocholesterol reductase OS=Xenopus laevis GN=dhcr7 PE=2 SV=1 Back     alignment and function description
>sp|Q6P4M0|DHCR7_XENTR 7-dehydrocholesterol reductase OS=Xenopus tropicalis GN=dhcr7 PE=2 SV=1 Back     alignment and function description
>sp|Q7SXF1|DHCR7_DANRE 7-dehydrocholesterol reductase OS=Danio rerio GN=dhcr7 PE=2 SV=1 Back     alignment and function description
>sp|Q9UBM7|DHCR7_HUMAN 7-dehydrocholesterol reductase OS=Homo sapiens GN=DHCR7 PE=1 SV=1 Back     alignment and function description
>sp|P38670|ERG24_NEUCR Delta(14)-sterol reductase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=erg-3 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query193
39726086 435 sterol delta-7 reductase [Tropaeolum maj 0.963 0.427 0.876 1e-94
359483216 561 PREDICTED: 7-dehydrocholesterol reductas 0.963 0.331 0.881 3e-94
255544518 560 7-dehydrocholesterol reductase, putative 0.963 0.332 0.854 1e-93
297735748 418 unnamed protein product [Vitis vinifera] 0.963 0.444 0.881 3e-93
224113247 434 predicted protein [Populus trichocarpa] 0.963 0.428 0.849 5e-92
118484183 400 unknown [Populus trichocarpa] 0.963 0.465 0.849 8e-92
224100505 437 predicted protein [Populus trichocarpa] 0.963 0.425 0.844 3e-91
74273625 437 sterol delta-7 reductase DWF5 [Gossypium 0.963 0.425 0.854 5e-91
297852742 432 hypothetical protein ARALYDRAFT_474170 [ 0.963 0.430 0.817 9e-87
15222967 432 7-dehydrocholesterol reductase [Arabidop 0.963 0.430 0.806 9e-86
>gi|39726086|gb|AAR29980.1| sterol delta-7 reductase [Tropaeolum majus] Back     alignment and taxonomy information
 Score =  351 bits (900), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 163/186 (87%), Positives = 179/186 (96%)

Query: 1   MVHADGSVIKSWDYLRQNGLQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGP 60
           MVHADGS+ ++WDYLRQNGLQGFIDIWP PT +AWK+I C+GAFEAALQLLLPGKRVEGP
Sbjct: 36  MVHADGSIGQTWDYLRQNGLQGFIDIWPRPTVIAWKIIFCYGAFEAALQLLLPGKRVEGP 95

Query: 61  ISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIF 120
           ISP G+RP+YKANG+A++AVTLITYL LWW+GIFNPTIVYDHLGEI+SALIFGSFIFCIF
Sbjct: 96  ISPAGNRPIYKANGLAAFAVTLITYLGLWWYGIFNPTIVYDHLGEIFSALIFGSFIFCIF 155

Query: 121 LYIKGHLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTY 180
           LY+KGHLAPSS+DSGSCGN+IIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTY
Sbjct: 156 LYLKGHLAPSSSDSGSCGNLIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTY 215

Query: 181 CIKQVE 186
           CIKQ E
Sbjct: 216 CIKQYE 221




Source: Tropaeolum majus

Species: Tropaeolum majus

Genus: Tropaeolum

Family: Tropaeolaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483216|ref|XP_002268455.2| PREDICTED: 7-dehydrocholesterol reductase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255544518|ref|XP_002513320.1| 7-dehydrocholesterol reductase, putative [Ricinus communis] gi|223547228|gb|EEF48723.1| 7-dehydrocholesterol reductase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297735748|emb|CBI18435.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224113247|ref|XP_002316435.1| predicted protein [Populus trichocarpa] gi|222865475|gb|EEF02606.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118484183|gb|ABK93973.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224100505|ref|XP_002311902.1| predicted protein [Populus trichocarpa] gi|222851722|gb|EEE89269.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|74273625|gb|ABA01480.1| sterol delta-7 reductase DWF5 [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|297852742|ref|XP_002894252.1| hypothetical protein ARALYDRAFT_474170 [Arabidopsis lyrata subsp. lyrata] gi|297340094|gb|EFH70511.1| hypothetical protein ARALYDRAFT_474170 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15222967|ref|NP_175460.1| 7-dehydrocholesterol reductase [Arabidopsis thaliana] gi|20140296|sp|Q9LDU6.1|ST7R_ARATH RecName: Full=7-dehydrocholesterol reductase; Short=7-DHC reductase; AltName: Full=Protein DWARF 5; AltName: Full=Sterol Delta(7)-reductase gi|7542561|gb|AAF63498.1|AF239701_1 sterol delta7 reductase [Arabidopsis thaliana] gi|9454565|gb|AAF87888.1|AC012561_21 sterol delta7 reductase [Arabidopsis thaliana] gi|20466246|gb|AAM20440.1| sterol delta7 reductase [Arabidopsis thaliana] gi|23198074|gb|AAN15564.1| sterol delta7 reductase [Arabidopsis thaliana] gi|110742801|dbj|BAE99303.1| sterol delta7 reductase [Arabidopsis thaliana] gi|332194426|gb|AEE32547.1| 7-dehydrocholesterol reductase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query193
TAIR|locus:2008071 432 DWF5 "DWARF 5" [Arabidopsis th 0.963 0.430 0.806 1.3e-84
TIGR_CMR|CBU_1158 455 CBU_1158 "ergosterol biosynthe 0.818 0.347 0.515 6.8e-40
UNIPROTKB|G4NHP6 445 MGG_03765 "7-dehydrocholestero 0.735 0.319 0.372 4.4e-18
UNIPROTKB|F1P4X7 475 DHCR7 "Uncharacterized protein 0.834 0.338 0.318 5.4e-18
MGI|MGI:1298378 471 Dhcr7 "7-dehydrocholesterol re 0.865 0.354 0.324 3.1e-17
RGD|621769 471 Dhcr7 "7-dehydrocholesterol re 0.865 0.354 0.324 3.9e-17
DICTYBASE|DDB_G0284407 462 erg24 "Delta(14)-sterol reduct 0.849 0.354 0.317 4.8e-17
UNIPROTKB|G8JKY2 475 DHCR7 "7-dehydrocholesterol re 0.823 0.334 0.320 1.1e-16
UNIPROTKB|Q5E9J5 475 DHCR7 "7-dehydrocholesterol re 0.823 0.334 0.320 1.4e-16
UNIPROTKB|E2RNQ5 475 DHCR7 "Uncharacterized protein 0.834 0.338 0.318 1.4e-15
TAIR|locus:2008071 DWF5 "DWARF 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
 Identities = 150/186 (80%), Positives = 169/186 (90%)

Query:     1 MVHADGSVIKSWDYLRQNGLQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGP 60
             MVH DGSV +++ +  +NG+QG I+IWP PT +AWK+I C+GAFEA LQLLLPGKRVEGP
Sbjct:    33 MVHQDGSVTQTFGFFWENGVQGLINIWPRPTLIAWKIIFCYGAFEAILQLLLPGKRVEGP 92

Query:    61 ISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIF 120
             ISP G+RPVYKANG+A+Y VTL TYL LWWFGIFNP IVYDHLGEI+SALIFGSFIFC+ 
Sbjct:    93 ISPAGNRPVYKANGLAAYFVTLATYLGLWWFGIFNPAIVYDHLGEIFSALIFGSFIFCVL 152

Query:   121 LYIKGHLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTY 180
             LYIKGH+APSS+DSGSCGN+IIDFYWGMELYPRIGK+FDIKVFTNCRFGMMSWAVLAVTY
Sbjct:   153 LYIKGHVAPSSSDSGSCGNLIIDFYWGMELYPRIGKSFDIKVFTNCRFGMMSWAVLAVTY 212

Query:   181 CIKQVE 186
             CIKQ E
Sbjct:   213 CIKQYE 218




GO:0005634 "nucleus" evidence=ISM
GO:0016020 "membrane" evidence=IEA
GO:0016628 "oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009918 "sterol delta7 reductase activity" evidence=IMP
GO:0016126 "sterol biosynthetic process" evidence=RCA;TAS
GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA;IMP
GO:0005886 "plasma membrane" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006084 "acetyl-CoA metabolic process" evidence=RCA
GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IDA
TIGR_CMR|CBU_1158 CBU_1158 "ergosterol biosynthesis ERG4/ERG24 family protein" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|G4NHP6 MGG_03765 "7-dehydrocholesterol reductase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|F1P4X7 DHCR7 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1298378 Dhcr7 "7-dehydrocholesterol reductase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|621769 Dhcr7 "7-dehydrocholesterol reductase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0284407 erg24 "Delta(14)-sterol reductase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|G8JKY2 DHCR7 "7-dehydrocholesterol reductase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q5E9J5 DHCR7 "7-dehydrocholesterol reductase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RNQ5 DHCR7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LDU6ST7R_ARATH1, ., 3, ., 1, ., 2, 10.80640.96370.4305yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.3.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query193
pfam01222 429 pfam01222, ERG4_ERG24, Ergosterol biosynthesis ERG 8e-23
>gnl|CDD|216371 pfam01222, ERG4_ERG24, Ergosterol biosynthesis ERG4/ERG24 family Back     alignment and domain information
 Score = 94.0 bits (234), Expect = 8e-23
 Identities = 57/165 (34%), Positives = 81/165 (49%), Gaps = 4/165 (2%)

Query: 29  IPTAVAWKLIACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSL 88
                 W +   +  F+A   L LPGK VEG     G +  YK N   S+ +TL     L
Sbjct: 65  EWERYLWTVFLLWYFFQAVFYLTLPGKVVEGLPLSNGRKLPYKINAFWSFLLTLAAIGVL 124

Query: 89  WWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDS---GSCGNIIIDFY 145
            +  +F  T +YD+  +I S+ I  SF   I+LY++   AP        G+ GN+I DF+
Sbjct: 125 HYTQLFELTYLYDNFVQIMSSAILFSFALAIYLYVRSLKAPEEDKDAPGGNSGNLIYDFF 184

Query: 146 WGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVEALSY 190
            G EL PRIG   DIK+F   R G++ W  + +   +KQ E   Y
Sbjct: 185 IGRELNPRIGS-LDIKMFFELRPGLLGWVFINLAALLKQYETYGY 228


Length = 429

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 193
PF01222 432 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 fam 100.0
KOG1435 428 consensus Sterol reductase/lamin B receptor [Lipid 100.0
>PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis Back     alignment and domain information
Probab=100.00  E-value=6.7e-55  Score=397.26  Aligned_cols=163  Identities=45%  Similarity=0.816  Sum_probs=157.7

Q ss_pred             CccHHHHHHHHHHHHHHHHHHhhCCcceeeCcCCCCCCCcccccchhHHHHHHHHHHHHHHHhcccccceehhhHHHHHH
Q 029443           29 IPTAVAWKLIACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYS  108 (193)
Q Consensus        29 ~pt~~a~~~y~~~~~~q~lL~~~lPG~~v~G~~~~~G~rl~Y~~NGl~~~~~t~~~~~~~~~~g~~~~~~i~d~~~~Ll~  108 (193)
                      .||+++|++|++|+++|++|+.++||++++|+|+|||+|++|||||+.++++|+++++++++.++++++.|+|||+++++
T Consensus        65 ~~~~~a~~~~~~~~~~qa~l~~~lPG~~v~G~~l~~G~rL~Yk~NGl~~~~~tl~~~~~l~~~~~~~~~~i~d~~~~L~~  144 (432)
T PF01222_consen   65 LWDWEAWKVYLAWFAFQALLYLVLPGKRVEGPPLPDGKRLKYKCNGLQSFLVTLALFAVLHYYGIFPLTFIYDHFGQLLT  144 (432)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCceEEECcCcCCCCcccEEeCCHHHHHHHHHHHHHHHHcCCCChHhHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcccCCCC------CCCCCCcchhHHHhcCcccCCccccccchhhhhhhchhHHHHHHHHHHHHH
Q 029443          109 ALIFGSFIFCIFLYIKGHLAPSS------TDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCI  182 (193)
Q Consensus       109 ~~~i~s~~~s~~ly~k~~~~p~~------~~~g~sGn~iyDff~G~ELNPRig~~~DlK~f~e~R~gli~w~li~ls~a~  182 (193)
                      +++++|+++|+++|+||+..|+.      +++++|||+||||||||||||||| ++|+|||+|+||||++|.++|+|+++
T Consensus       145 ~~~i~s~~~s~~lyik~~~~~~~~~d~~l~~~~~sGn~iyDff~G~ELNPRig-~~DlK~F~e~R~gli~w~li~ls~a~  223 (432)
T PF01222_consen  145 AANIFSFILSIFLYIKSFRAPSHPKDRQLAPGGNSGNFIYDFFMGRELNPRIG-GFDLKMFCELRPGLIGWLLINLSFAA  223 (432)
T ss_pred             HHHHHHHHHHHHHHHhhhccCCccccccccccCCCCceeeeeeeccccCCCee-eEeeeeeeccChHHHHHHHHHHHHHH
Confidence            99999999999999999998872      369999999999999999999999 89999999999999999999999999


Q ss_pred             HHHHHcCccc
Q 029443          183 KQVEALSYFC  192 (193)
Q Consensus       183 kQy~~~G~i~  192 (193)
                      ||||++|++|
T Consensus       224 ~qye~~G~vs  233 (432)
T PF01222_consen  224 KQYEQYGYVS  233 (432)
T ss_pred             HHHHHhCCCC
Confidence            9999999987



They act by reducing double bonds in precursors of ergosterol []. These proteins are highly hydrophobic and seem to contain seven or eight transmembrane regions. Chicken lamin B receptor that is thought to anchor the lamina to the inner nuclear membrane belongs to this family.; GO: 0016020 membrane

>KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00