Citrus Sinensis ID: 029443
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 193 | ||||||
| 39726086 | 435 | sterol delta-7 reductase [Tropaeolum maj | 0.963 | 0.427 | 0.876 | 1e-94 | |
| 359483216 | 561 | PREDICTED: 7-dehydrocholesterol reductas | 0.963 | 0.331 | 0.881 | 3e-94 | |
| 255544518 | 560 | 7-dehydrocholesterol reductase, putative | 0.963 | 0.332 | 0.854 | 1e-93 | |
| 297735748 | 418 | unnamed protein product [Vitis vinifera] | 0.963 | 0.444 | 0.881 | 3e-93 | |
| 224113247 | 434 | predicted protein [Populus trichocarpa] | 0.963 | 0.428 | 0.849 | 5e-92 | |
| 118484183 | 400 | unknown [Populus trichocarpa] | 0.963 | 0.465 | 0.849 | 8e-92 | |
| 224100505 | 437 | predicted protein [Populus trichocarpa] | 0.963 | 0.425 | 0.844 | 3e-91 | |
| 74273625 | 437 | sterol delta-7 reductase DWF5 [Gossypium | 0.963 | 0.425 | 0.854 | 5e-91 | |
| 297852742 | 432 | hypothetical protein ARALYDRAFT_474170 [ | 0.963 | 0.430 | 0.817 | 9e-87 | |
| 15222967 | 432 | 7-dehydrocholesterol reductase [Arabidop | 0.963 | 0.430 | 0.806 | 9e-86 |
| >gi|39726086|gb|AAR29980.1| sterol delta-7 reductase [Tropaeolum majus] | Back alignment and taxonomy information |
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Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 163/186 (87%), Positives = 179/186 (96%)
Query: 1 MVHADGSVIKSWDYLRQNGLQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGP 60
MVHADGS+ ++WDYLRQNGLQGFIDIWP PT +AWK+I C+GAFEAALQLLLPGKRVEGP
Sbjct: 36 MVHADGSIGQTWDYLRQNGLQGFIDIWPRPTVIAWKIIFCYGAFEAALQLLLPGKRVEGP 95
Query: 61 ISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIF 120
ISP G+RP+YKANG+A++AVTLITYL LWW+GIFNPTIVYDHLGEI+SALIFGSFIFCIF
Sbjct: 96 ISPAGNRPIYKANGLAAFAVTLITYLGLWWYGIFNPTIVYDHLGEIFSALIFGSFIFCIF 155
Query: 121 LYIKGHLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTY 180
LY+KGHLAPSS+DSGSCGN+IIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTY
Sbjct: 156 LYLKGHLAPSSSDSGSCGNLIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTY 215
Query: 181 CIKQVE 186
CIKQ E
Sbjct: 216 CIKQYE 221
|
Source: Tropaeolum majus Species: Tropaeolum majus Genus: Tropaeolum Family: Tropaeolaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359483216|ref|XP_002268455.2| PREDICTED: 7-dehydrocholesterol reductase-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255544518|ref|XP_002513320.1| 7-dehydrocholesterol reductase, putative [Ricinus communis] gi|223547228|gb|EEF48723.1| 7-dehydrocholesterol reductase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|297735748|emb|CBI18435.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224113247|ref|XP_002316435.1| predicted protein [Populus trichocarpa] gi|222865475|gb|EEF02606.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|118484183|gb|ABK93973.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224100505|ref|XP_002311902.1| predicted protein [Populus trichocarpa] gi|222851722|gb|EEE89269.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|74273625|gb|ABA01480.1| sterol delta-7 reductase DWF5 [Gossypium hirsutum] | Back alignment and taxonomy information |
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| >gi|297852742|ref|XP_002894252.1| hypothetical protein ARALYDRAFT_474170 [Arabidopsis lyrata subsp. lyrata] gi|297340094|gb|EFH70511.1| hypothetical protein ARALYDRAFT_474170 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|15222967|ref|NP_175460.1| 7-dehydrocholesterol reductase [Arabidopsis thaliana] gi|20140296|sp|Q9LDU6.1|ST7R_ARATH RecName: Full=7-dehydrocholesterol reductase; Short=7-DHC reductase; AltName: Full=Protein DWARF 5; AltName: Full=Sterol Delta(7)-reductase gi|7542561|gb|AAF63498.1|AF239701_1 sterol delta7 reductase [Arabidopsis thaliana] gi|9454565|gb|AAF87888.1|AC012561_21 sterol delta7 reductase [Arabidopsis thaliana] gi|20466246|gb|AAM20440.1| sterol delta7 reductase [Arabidopsis thaliana] gi|23198074|gb|AAN15564.1| sterol delta7 reductase [Arabidopsis thaliana] gi|110742801|dbj|BAE99303.1| sterol delta7 reductase [Arabidopsis thaliana] gi|332194426|gb|AEE32547.1| 7-dehydrocholesterol reductase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 193 | ||||||
| TAIR|locus:2008071 | 432 | DWF5 "DWARF 5" [Arabidopsis th | 0.963 | 0.430 | 0.806 | 1.3e-84 | |
| TIGR_CMR|CBU_1158 | 455 | CBU_1158 "ergosterol biosynthe | 0.818 | 0.347 | 0.515 | 6.8e-40 | |
| UNIPROTKB|G4NHP6 | 445 | MGG_03765 "7-dehydrocholestero | 0.735 | 0.319 | 0.372 | 4.4e-18 | |
| UNIPROTKB|F1P4X7 | 475 | DHCR7 "Uncharacterized protein | 0.834 | 0.338 | 0.318 | 5.4e-18 | |
| MGI|MGI:1298378 | 471 | Dhcr7 "7-dehydrocholesterol re | 0.865 | 0.354 | 0.324 | 3.1e-17 | |
| RGD|621769 | 471 | Dhcr7 "7-dehydrocholesterol re | 0.865 | 0.354 | 0.324 | 3.9e-17 | |
| DICTYBASE|DDB_G0284407 | 462 | erg24 "Delta(14)-sterol reduct | 0.849 | 0.354 | 0.317 | 4.8e-17 | |
| UNIPROTKB|G8JKY2 | 475 | DHCR7 "7-dehydrocholesterol re | 0.823 | 0.334 | 0.320 | 1.1e-16 | |
| UNIPROTKB|Q5E9J5 | 475 | DHCR7 "7-dehydrocholesterol re | 0.823 | 0.334 | 0.320 | 1.4e-16 | |
| UNIPROTKB|E2RNQ5 | 475 | DHCR7 "Uncharacterized protein | 0.834 | 0.338 | 0.318 | 1.4e-15 |
| TAIR|locus:2008071 DWF5 "DWARF 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 150/186 (80%), Positives = 169/186 (90%)
Query: 1 MVHADGSVIKSWDYLRQNGLQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGP 60
MVH DGSV +++ + +NG+QG I+IWP PT +AWK+I C+GAFEA LQLLLPGKRVEGP
Sbjct: 33 MVHQDGSVTQTFGFFWENGVQGLINIWPRPTLIAWKIIFCYGAFEAILQLLLPGKRVEGP 92
Query: 61 ISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIF 120
ISP G+RPVYKANG+A+Y VTL TYL LWWFGIFNP IVYDHLGEI+SALIFGSFIFC+
Sbjct: 93 ISPAGNRPVYKANGLAAYFVTLATYLGLWWFGIFNPAIVYDHLGEIFSALIFGSFIFCVL 152
Query: 121 LYIKGHLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTY 180
LYIKGH+APSS+DSGSCGN+IIDFYWGMELYPRIGK+FDIKVFTNCRFGMMSWAVLAVTY
Sbjct: 153 LYIKGHVAPSSSDSGSCGNLIIDFYWGMELYPRIGKSFDIKVFTNCRFGMMSWAVLAVTY 212
Query: 181 CIKQVE 186
CIKQ E
Sbjct: 213 CIKQYE 218
|
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| TIGR_CMR|CBU_1158 CBU_1158 "ergosterol biosynthesis ERG4/ERG24 family protein" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G4NHP6 MGG_03765 "7-dehydrocholesterol reductase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P4X7 DHCR7 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| MGI|MGI:1298378 Dhcr7 "7-dehydrocholesterol reductase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|621769 Dhcr7 "7-dehydrocholesterol reductase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0284407 erg24 "Delta(14)-sterol reductase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G8JKY2 DHCR7 "7-dehydrocholesterol reductase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5E9J5 DHCR7 "7-dehydrocholesterol reductase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RNQ5 DHCR7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 193 | |||
| pfam01222 | 429 | pfam01222, ERG4_ERG24, Ergosterol biosynthesis ERG | 8e-23 |
| >gnl|CDD|216371 pfam01222, ERG4_ERG24, Ergosterol biosynthesis ERG4/ERG24 family | Back alignment and domain information |
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Score = 94.0 bits (234), Expect = 8e-23
Identities = 57/165 (34%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 29 IPTAVAWKLIACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSL 88
W + + F+A L LPGK VEG G + YK N S+ +TL L
Sbjct: 65 EWERYLWTVFLLWYFFQAVFYLTLPGKVVEGLPLSNGRKLPYKINAFWSFLLTLAAIGVL 124
Query: 89 WWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDS---GSCGNIIIDFY 145
+ +F T +YD+ +I S+ I SF I+LY++ AP G+ GN+I DF+
Sbjct: 125 HYTQLFELTYLYDNFVQIMSSAILFSFALAIYLYVRSLKAPEEDKDAPGGNSGNLIYDFF 184
Query: 146 WGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVEALSY 190
G EL PRIG DIK+F R G++ W + + +KQ E Y
Sbjct: 185 IGRELNPRIGS-LDIKMFFELRPGLLGWVFINLAALLKQYETYGY 228
|
Length = 429 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 193 | |||
| PF01222 | 432 | ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 fam | 100.0 | |
| KOG1435 | 428 | consensus Sterol reductase/lamin B receptor [Lipid | 100.0 |
| >PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis | Back alignment and domain information |
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Probab=100.00 E-value=6.7e-55 Score=397.26 Aligned_cols=163 Identities=45% Similarity=0.816 Sum_probs=157.7
Q ss_pred CccHHHHHHHHHHHHHHHHHHhhCCcceeeCcCCCCCCCcccccchhHHHHHHHHHHHHHHHhcccccceehhhHHHHHH
Q 029443 29 IPTAVAWKLIACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYS 108 (193)
Q Consensus 29 ~pt~~a~~~y~~~~~~q~lL~~~lPG~~v~G~~~~~G~rl~Y~~NGl~~~~~t~~~~~~~~~~g~~~~~~i~d~~~~Ll~ 108 (193)
.||+++|++|++|+++|++|+.++||++++|+|+|||+|++|||||+.++++|+++++++++.++++++.|+|||+++++
T Consensus 65 ~~~~~a~~~~~~~~~~qa~l~~~lPG~~v~G~~l~~G~rL~Yk~NGl~~~~~tl~~~~~l~~~~~~~~~~i~d~~~~L~~ 144 (432)
T PF01222_consen 65 LWDWEAWKVYLAWFAFQALLYLVLPGKRVEGPPLPDGKRLKYKCNGLQSFLVTLALFAVLHYYGIFPLTFIYDHFGQLLT 144 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCceEEECcCcCCCCcccEEeCCHHHHHHHHHHHHHHHHcCCCChHhHHHHHHHHHH
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCC------CCCCCCcchhHHHhcCcccCCccccccchhhhhhhchhHHHHHHHHHHHHH
Q 029443 109 ALIFGSFIFCIFLYIKGHLAPSS------TDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCI 182 (193)
Q Consensus 109 ~~~i~s~~~s~~ly~k~~~~p~~------~~~g~sGn~iyDff~G~ELNPRig~~~DlK~f~e~R~gli~w~li~ls~a~ 182 (193)
+++++|+++|+++|+||+..|+. +++++|||+||||||||||||||| ++|+|||+|+||||++|.++|+|+++
T Consensus 145 ~~~i~s~~~s~~lyik~~~~~~~~~d~~l~~~~~sGn~iyDff~G~ELNPRig-~~DlK~F~e~R~gli~w~li~ls~a~ 223 (432)
T PF01222_consen 145 AANIFSFILSIFLYIKSFRAPSHPKDRQLAPGGNSGNFIYDFFMGRELNPRIG-GFDLKMFCELRPGLIGWLLINLSFAA 223 (432)
T ss_pred HHHHHHHHHHHHHHHhhhccCCccccccccccCCCCceeeeeeeccccCCCee-eEeeeeeeccChHHHHHHHHHHHHHH
Confidence 99999999999999999998872 369999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHcCccc
Q 029443 183 KQVEALSYFC 192 (193)
Q Consensus 183 kQy~~~G~i~ 192 (193)
||||++|++|
T Consensus 224 ~qye~~G~vs 233 (432)
T PF01222_consen 224 KQYEQYGYVS 233 (432)
T ss_pred HHHHHhCCCC
Confidence 9999999987
|
They act by reducing double bonds in precursors of ergosterol []. These proteins are highly hydrophobic and seem to contain seven or eight transmembrane regions. Chicken lamin B receptor that is thought to anchor the lamina to the inner nuclear membrane belongs to this family.; GO: 0016020 membrane |
| >KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00