Citrus Sinensis ID: 029469

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---
MIEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQDCEVISNSQLAAMMSMSGMQQALTNQFPDLELKSPLALNPFTSVLDTLKKLLELYFKK
cEEEEEEEccccccEEEEEEEEEEccccEEEEEEEEEEEccccccccccccHHHHHHcccEEEEEcccccccccccEEEEEEccccEEEEEEcccccEEEEEcccccccHHHHHHHHHHHHHccccccccEEccccccccccHHHHHHHccccccccHHcccccccccccccccccccHHHHHHHHHHHHHcc
cccEEEEcccccccEEEEEEEEccccccEEEEEEEEEEEccHHHHHHHHHHHHHHHHHccccEEEccccccccccccEEEEEccccEEEEEccccccEEEEEEccccccHHHHHHHHHHHHHccccHHHccccccccccccHHHHHHHHcccHHHHHHHccccccccccccEccccHHHHHHHHHHHHHHccc
miegvytfdkekpaiqVDTFcvhggpdgyitgirgnvqclpeeeleKNVTDLEKQEMIkgkcylrfptlpfipkepydviatdydnfalvsgakdksfiqiysrtptpgpefIEKYKSYLAnfgydpnkikdtpqdcevISNSQLAAMMSMSGMQQALtnqfpdlelksplalnpfTSVLDTLKKLLELYFKK
miegvytfdkekpaiqVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIATDYDNFALVsgakdksfiqiysrtptpgpefIEKYKSYLANFGYDPNKIKDTPQDCEVISNSQLAAMMSMSGMQQALTNQFPDLELKSPLALNPFTSVLDTLKKLLELYFKK
MIEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQDCEVISNsqlaammsmsgmqqalTNQFPDLELKSPLALNPFTSVLDTLKKLLELYFKK
****VYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIK*****C*V*************************LELKSPLALNPFTSVLDTLKKLLELYF**
*IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCL***********LEKQEMIKGKCYLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQDCE****************************LKSPLALNPFTSVLDTLKKLLELYFK*
MIEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQDCEVISNSQLAAMMSMSGMQQALTNQFPDLELKSPLALNPFTSVLDTLKKLLELYFKK
MIEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQDCEVISNSQLAAMMSMSGMQQALTNQFPDLELKSPLALNPFTSVLDTLKKLLELYFKK
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQDCEVISNSQLAAMMSMSGMQQALTNQFPDLELKSPLALNPFTSVLDTLKKLLELYFKK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query193 2.2.26 [Sep-21-2011]
P51910189 Apolipoprotein D OS=Mus m yes no 0.492 0.502 0.307 0.0002
>sp|P51910|APOD_MOUSE Apolipoprotein D OS=Mus musculus GN=Apod PE=2 SV=1 Back     alignment and function desciption
 Score = 45.8 bits (107), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 22/117 (18%)

Query: 25  GPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIATDY 84
            PDG +  ++G       E  + NV++  K E       ++F   P +P  PY ++ATDY
Sbjct: 82  SPDGTMNQVKG-------EAKQSNVSEPAKLE-------VQF--FPLMPPAPYWILATDY 125

Query: 85  DNFALVSGAK------DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ 135
           +N+ALV             F+ I  R P   PE I   K  L + G D  K+  T Q
Sbjct: 126 ENYALVYSCTTFFWLFHVDFVWILGRNPYLPPETITYLKDILTSNGIDIEKMTTTDQ 182
APOD occurs in the macromolecular complex with lecithin-transport and binding of bilin. Appears to be able to transport a variety of ligands in a number of different contexts.
Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query193
297735981 347 unnamed protein product [Vitis vinifera] 0.984 0.547 0.873 1e-95
359494023 730 PREDICTED: F-box protein At3g62230-like 0.984 0.260 0.873 3e-95
356553331 330 PREDICTED: uncharacterized protein LOC10 0.989 0.578 0.858 1e-94
356501503 329 PREDICTED: uncharacterized protein LOC10 0.989 0.580 0.858 4e-94
77744917 329 chloroplast lipocalin [Glycine max] 0.989 0.580 0.853 7e-94
255563999 341 protein with unknown function [Ricinus c 0.984 0.557 0.863 7e-94
77744911 334 chloroplast lipocalin [Ipomoea nil] 0.984 0.568 0.847 1e-93
449468480 330 PREDICTED: uncharacterized protein LOC10 0.984 0.575 0.857 2e-93
255635556 330 unknown [Glycine max] 0.989 0.578 0.837 4e-91
224124286 342 predicted protein [Populus trichocarpa] 0.984 0.555 0.836 2e-90
>gi|297735981|emb|CBI23955.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  353 bits (907), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 166/190 (87%), Positives = 177/190 (93%)

Query: 3   EGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKC 62
           +GVYTFD E PAIQVDTFCVHGGPDGYITGIRG VQCL EEELEK+ TDLEKQ MI+ KC
Sbjct: 158 QGVYTFDMESPAIQVDTFCVHGGPDGYITGIRGKVQCLEEEELEKSATDLEKQVMIREKC 217

Query: 63  YLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDKSFIQIYSRTPTPGPEFIEKYKSYLAN 122
           YLRFPTLPFIPKEPYDVIATDYD FALVSGAKD+SFIQIYSRTP PGP+FIEKYK+YLAN
Sbjct: 218 YLRFPTLPFIPKEPYDVIATDYDTFALVSGAKDRSFIQIYSRTPNPGPKFIEKYKAYLAN 277

Query: 123 FGYDPNKIKDTPQDCEVISNSQLAAMMSMSGMQQALTNQFPDLELKSPLALNPFTSVLDT 182
           FGYDP+KIKDTPQDCEV+SNS+LAAMMSMSGMQQALTNQFPDL LKSP+  NPFTSV DT
Sbjct: 278 FGYDPSKIKDTPQDCEVMSNSKLAAMMSMSGMQQALTNQFPDLGLKSPIEFNPFTSVFDT 337

Query: 183 LKKLLELYFK 192
           LKKL+ELYFK
Sbjct: 338 LKKLVELYFK 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359494023|ref|XP_002281469.2| PREDICTED: F-box protein At3g62230-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356553331|ref|XP_003545010.1| PREDICTED: uncharacterized protein LOC100814557 [Glycine max] Back     alignment and taxonomy information
>gi|356501503|ref|XP_003519564.1| PREDICTED: uncharacterized protein LOC100787880 [Glycine max] Back     alignment and taxonomy information
>gi|77744917|gb|ABB02412.1| chloroplast lipocalin [Glycine max] Back     alignment and taxonomy information
>gi|255563999|ref|XP_002522999.1| protein with unknown function [Ricinus communis] gi|223537811|gb|EEF39429.1| protein with unknown function [Ricinus communis] Back     alignment and taxonomy information
>gi|77744911|gb|ABB02409.1| chloroplast lipocalin [Ipomoea nil] Back     alignment and taxonomy information
>gi|449468480|ref|XP_004151949.1| PREDICTED: uncharacterized protein LOC101212269 [Cucumis sativus] gi|449489988|ref|XP_004158477.1| PREDICTED: uncharacterized LOC101212269 [Cucumis sativus] Back     alignment and taxonomy information
>gi|255635556|gb|ACU18128.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|224124286|ref|XP_002319293.1| predicted protein [Populus trichocarpa] gi|118489963|gb|ABK96778.1| unknown [Populus trichocarpa x Populus deltoides] gi|222857669|gb|EEE95216.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query193
TAIR|locus:2100407353 CHL "chloroplastic lipocalin" 0.979 0.535 0.694 2.1e-70
MGI|MGI:88056189 Apod "apolipoprotein D" [Mus m 0.533 0.544 0.315 7.4e-05
UNIPROTKB|Q5G8Y9189 ApoD "Apolipoprotein D" [Gallu 0.347 0.354 0.351 0.00026
UNIPROTKB|G3QHM6200 APOD "Uncharacterized protein" 0.367 0.355 0.333 0.0008
UNIPROTKB|P05090189 APOD "Apolipoprotein D" [Homo 0.367 0.375 0.333 0.00091
TAIR|locus:2100407 CHL "chloroplastic lipocalin" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
 Identities = 132/190 (69%), Positives = 152/190 (80%)

Query:     3 EGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKC 62
             +GVYTFD ++ AI+VDTFCVHG PDGYITGIRG VQC+  E+LEK+ TDLEKQEMIK KC
Sbjct:   165 QGVYTFDMKESAIRVDTFCVHGSPDGYITGIRGKVQCVGAEDLEKSETDLEKQEMIKEKC 224

Query:    63 YLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDKSFIQIYSRTPTPGPEFIEKYKSYLAN 122
             +LRFPT+PFIPK PYDVIATDYDN+ALVSGAKDK F+Q+YSRTP PGPEFI KYK+YLA 
Sbjct:   225 FLRFPTIPFIPKLPYDVIATDYDNYALVSGAKDKGFVQVYSRTPNPGPEFIAKYKNYLAQ 284

Query:   123 FGYDPNKIKDTPQDCEVISNXXXXXXXXXXXXXXXXTNQFPDLELKSPLALNPFTSVLDT 182
             FGYDP KIKDTPQDCEV ++                TNQFPDL L+  +  +PFTSV +T
Sbjct:   285 FGYDPEKIKDTPQDCEV-TDAELAAMMSMPGMEQTLTNQFPDLGLRKSVQFDPFTSVFET 343

Query:   183 LKKLLELYFK 192
             LKKL+ LYFK
Sbjct:   344 LKKLVPLYFK 353
GO:0005576 "extracellular region" evidence=ISM
GO:0009535 "chloroplast thylakoid membrane" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0006979 "response to oxidative stress" evidence=IMP
GO:0031977 "thylakoid lumen" evidence=IDA
MGI|MGI:88056 Apod "apolipoprotein D" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q5G8Y9 ApoD "Apolipoprotein D" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|G3QHM6 APOD "Uncharacterized protein" [Gorilla gorilla gorilla (taxid:9595)] Back     alignment and assigned GO terms
UNIPROTKB|P05090 APOD "Apolipoprotein D" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query193
pfam00061140 pfam00061, Lipocalin, Lipocalin / cytosolic fatty- 1e-05
COG3040174 COG3040, Blc, Bacterial lipocalin [Cell envelope b 3e-04
pfam08212140 pfam08212, Lipocalin_2, Lipocalin-like domain 0.002
>gnl|CDD|215686 pfam00061, Lipocalin, Lipocalin / cytosolic fatty-acid binding protein family Back     alignment and domain information 
 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 23/111 (20%), Positives = 36/111 (32%), Gaps = 11/111 (9%)

Query: 36  NVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYD------VIATDYDNFAL 89
            ++ L    L       +  +        +    P              V+ TDYDN+ +
Sbjct: 28  TIKVLENGNLPVTEITQDGGKCKTTSVTFKKTEEPGKLGVNEAGGRKVKVLTTDYDNYLI 87

Query: 90  V-----SGAKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ 135
                    K     ++Y R P   PE +EK+K +L   G D   I    Q
Sbjct: 88  FYQKGDKDGKTTIVRELYGRDPELSPELLEKFKKFLKELGIDEENIVRLYQ 138

Lipocalins are transporters for small hydrophobic molecules, such as lipids, steroid hormones, bilins, and retinoids. The family also encompasses the enzyme prostaglandin D synthase (EC:5.3.99.2). Alignment subsumes both the lipocalin and fatty acid binding protein signatures from PROSITE. This is supported on structural and functional grounds. The structure is an eight-stranded beta barrel. Length = 140
>gnl|CDD|225582 COG3040, Blc, Bacterial lipocalin [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|116798 pfam08212, Lipocalin_2, Lipocalin-like domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 193
KOG4824224 consensus Apolipoprotein D/Lipocalin [Cell wall/me 99.97
PF08212143 Lipocalin_2: Lipocalin-like domain; InterPro: IPR0 99.92
COG3040174 Blc Bacterial lipocalin [Cell envelope biogenesis, 99.91
PRK10477177 outer membrane lipoprotein Blc; Provisional 99.85
PF00061144 Lipocalin: Lipocalin / cytosolic fatty-acid bindin 99.35
PF03973148 Triabin: Triabin; InterPro: IPR005657 This family 97.87
PF02087178 Nitrophorin: Nitrophorin; InterPro: IPR002351 Nitr 97.61
KOG4824224 consensus Apolipoprotein D/Lipocalin [Cell wall/me 97.17
PF07137198 VDE: Violaxanthin de-epoxidase (VDE); InterPro: IP 97.1
PLN02372455 violaxanthin de-epoxidase 94.28
PF11032186 ApoM: Apolipoprotein M (ApoM); InterPro: IPR022734 86.25
>KOG4824 consensus Apolipoprotein D/Lipocalin [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information 
Probab=99.97  E-value=1.6e-31  Score=221.67  Aligned_cols=143  Identities=41%  Similarity=0.622  Sum_probs=125.3

Q ss_pred             ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEe-------cccCCCC
Q 029469            2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFP-------TLPFIPK   74 (193)
Q Consensus         2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~-------~~p~~p~   74 (193)
                      ||+.|++++++|.|.|.|.|+| .+||++..++|.|+++|+. ..++.            .+++|.       ++||  .
T Consensus        68 tt~~y~~~nkngkI~Vln~~v~-r~dG~~n~ieG~atpvn~~-s~k~e------------~kf~~~~p~~~~~~l~~--~  131 (224)
T KOG4824|consen   68 TTGAYTFDNKNGKIHVLNECVH-RPDGKINFIEGKATPVNED-SDKAE------------LKFEFQEPIFEKCFLRF--P  131 (224)
T ss_pred             eeeeeEecCCCceEEEeeeeee-cCCCccceeeeeeeecCCc-hhhhc------------ceeEEecCchHhhccCC--C
Confidence            8999999999999999999998 5999999999999999943 33322            123332       2233  5


Q ss_pred             CCEEEEEEcCCCEEEEEeec------CceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC-CCCcCChHHHHH
Q 029469           75 EPYDVIATDYDNFALVSGAK------DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ-DCEVISNSQLAA  147 (193)
Q Consensus        75 ~dY~Vl~TDYdnYAiV~~c~------~~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q-~C~~~~~~~~~~  147 (193)
                      +.|||+.|||++||++|+|.      +.+++|||||+|++.+|+++++.+++.+.|||+++|+.+|| +||. .+.++++
T Consensus       132 ~iy~Vl~tdyenya~~ysc~alisl~h~df~wIlsRtpn~epEt~~klkn~l~~~gyDpeKl~~Tpq~dcp~-~s~~~~~  210 (224)
T KOG4824|consen  132 PIYFVLGTDYENYADDYSCHALISLKHKDFLWILSRTPNMEPETIAKLKNKLAEEGYDPEKLHDTPQSDCPP-ESAEAAA  210 (224)
T ss_pred             CCcceecccHhheeccccccceeccCCCceEEEEecCCCCChHHHHHHHHHHHHcCCCHHHhccCCccCCCh-hhhhhHH
Confidence            68999999999999999995      45999999999999999999999999999999999999999 7999 8889999


Q ss_pred             HhccchhhhhhhcC
Q 029469          148 MMSMSGMQQALTNQ  161 (193)
Q Consensus       148 ~~~~~~~~~~~~~~  161 (193)
                      ||+||||++.|+||
T Consensus       211 ~~~~~~~~~sl~~~  224 (224)
T KOG4824|consen  211 DMKGPGMEKSLFGK  224 (224)
T ss_pred             hccCcchhhhhccC
Confidence            99999999999986

>PF08212 Lipocalin_2: Lipocalin-like domain; InterPro: IPR000566 Proteins which transport small hydrophobic molecules such as steroids, bilins, retinoids, and lipids share limited regions of sequence homology and a common tertiary structure architecture [, , , , ] Back     alignment and domain information
>COG3040 Blc Bacterial lipocalin [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK10477 outer membrane lipoprotein Blc; Provisional Back     alignment and domain information
>PF00061 Lipocalin: Lipocalin / cytosolic fatty-acid binding protein family fatty acid-binding protein signature lipocalin signature; InterPro: IPR000566 Proteins which transport small hydrophobic molecules such as steroids, bilins, retinoids, and lipids share limited regions of sequence homology and a common tertiary structure architecture [, , , , ] Back     alignment and domain information
>PF03973 Triabin: Triabin; InterPro: IPR005657 This family contains saliva proteins from haematophagous insects that counteract vertebrate host haemostasis events such as coagulation, vasoconstriction and platelet aggregation [] Back     alignment and domain information
>PF02087 Nitrophorin: Nitrophorin; InterPro: IPR002351 Nitrophorins are haemoproteins found in saliva of blood-feeding insects [, ] Back     alignment and domain information
>KOG4824 consensus Apolipoprotein D/Lipocalin [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PF07137 VDE: Violaxanthin de-epoxidase (VDE); InterPro: IPR010788 This family represents a conserved region approximately 350 residues long within plant violaxanthin de-epoxidase (VDE) Back     alignment and domain information
>PLN02372 violaxanthin de-epoxidase Back     alignment and domain information
>PF11032 ApoM: Apolipoprotein M (ApoM); InterPro: IPR022734 ApoM is a 25 kDa plasma protein associated with high-density lipoproteins (HDLs) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query193
2hzq_A174 Apolipoprotein D, APO-D, APOD; lipocalin, beta bar 3e-19
1i4u_A181 Crustacyanin; lipocalin fold, antiparallel beta ba 4e-15
1epa_A164 Epididymal retinoic acid-binding protein; 2.10A {R 4e-15
1kxo_A184 DIGA16; lipocalin, anticalin, genetical engineerin 8e-15
1gka_B174 Crustacyanin A2 subunit; lipocalin, lobster, astax 9e-15
3ebw_A163 PER A 4 allergen; beta barrel, cockroach; HET: PE4 3e-14
1z24_A189 Insecticyanin A form; blue biliprotein, INS-A, chr 4e-14
3fmz_A212 Retinol-binding protein 4; disease mutation, secre 2e-13
1kt6_A183 RBP, plasma retinol-binding protein; transport pro 9e-13
2xst_A161 Lipocalin 15; transport protein, LCN15, MSFL2541; 9e-13
1qwd_A177 Outer membrane lipoprotein BLC; bacterial lipocali 2e-12
3sao_A160 Extracellular fatty acid-binding protein; beta-bar 4e-10
3bx8_A178 Engineered human lipocalin 2; protein design, liga 1e-09
3o22_A162 Prostaglandin-H2 D-isomerase; lipocalin, prostagla 1e-09
2a2u_A181 Protein (alpha-2U-globulin); lipid binding protein 2e-09
1lf7_A182 Complement protein C8gamma; lipocalin, beta barrel 3e-09
3s26_A190 Neutrophil gelatinase-associated lipocalin; beta-b 1e-08
3cbc_A198 Neutrophil gelatinase-associated lipocalin; sidero 6e-08
1gm6_A175 SAL, salivary lipocalin; odorant-binding protein; 3e-07
2l5p_A184 Lipocalin 12; beta barrel, transport protein; NMR 3e-07
3qkg_A193 Protein AMBP; beta barrel, binding protein, bound 3e-07
1ew3_A159 Allergen EQU C 1; lipocalin, beta barrel; 2.30A {E 3e-07
3kff_A162 MUP 4, major urinary protein 4; pheromone, lipocal 6e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
2hlv_A160 Odorant-binding protein; domain swapping, transpor 3e-05
3l4r_A170 Allergen DOG 2, minor allergen CAN F 2; lipocalin 4e-05
1xki_A162 VON ebner'S gland protein; beta barrel, ligand bin 4e-05
1dzk_A157 PIG OBP, odorant-binding protein; lipocalin, trans 5e-05
1exs_A160 Beta-lactoglobulin; lipocalin fold, lipid-binding 1e-04
1bj7_A156 D 2; allergen, lipocalin; 1.80A {Bos taurus} SCOP: 3e-04
2ra6_A166 Trichosurin; lipocalin, beta barrel, glycoprotein, 6e-04
1e5p_A151 Aphrodisin; lipocalin, pheromone, hamster,; HET: M 7e-04
>2hzq_A Apolipoprotein D, APO-D, APOD; lipocalin, beta barrel, bilin-binding protein, transport protein; HET: STR; 1.80A {Homo sapiens} PDB: 2hzr_A Length = 174 Back     alignment and structure
 Score = 79.7 bits (196), Expect = 3e-19
 Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 26/150 (17%)

Query: 2   IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGK 61
           I+  Y+  +    I+V    +    DG +  I G    +   E                K
Sbjct: 40  IQANYSLMEN-GKIKVLNQELR--ADGTVNQIEGEATPVNLTE--------------PAK 82

Query: 62  CYLRFPTLPFIPKEPYDVIATDYDNFALV------SGAKDKSFIQIYSRTPTPGPEFIEK 115
             ++F    F+P  PY ++ATDY+N+ALV      S +    F  I +R     PE ++ 
Sbjct: 83  LEVKFS--WFMPSAPYHILATDYENYALVYSCTSISQSFHVDFAWILARNVALPPETVDS 140

Query: 116 YKSYLANFGYDPNKIKDTPQ-DCEVISNSQ 144
            K+ L +   D  K+  T Q +C  +S   
Sbjct: 141 LKNILTSNNIDVKKMTVTDQVNCPKLSAHH 170
>1i4u_A Crustacyanin; lipocalin fold, antiparallel beta barrel, transport protein; 1.15A {Synthetic} SCOP: b.60.1.1 PDB: 1obq_A 1obu_A 1s2p_A 1h91_A 1gka_A 1s44_A Length = 181 Back     alignment and structure
>1epa_A Epididymal retinoic acid-binding protein; 2.10A {Rattus norvegicus} SCOP: b.60.1.1 PDB: 1epb_A* Length = 164 Back     alignment and structure
>1kxo_A DIGA16; lipocalin, anticalin, genetical engineering, digoxigenin, ligand binding protein; 1.80A {Pieris brassicae} SCOP: b.60.1.1 PDB: 1lke_A* 1lnm_A* 1n0s_A* 1t0v_A 1bbp_A* Length = 184 Back     alignment and structure
>1gka_B Crustacyanin A2 subunit; lipocalin, lobster, astaxanthin, bathochromic, coloration; HET: AXT D12 EPE; 3.23A {Homarus gammarus} SCOP: b.60.1.1 Length = 174 Back     alignment and structure
>3ebw_A PER A 4 allergen; beta barrel, cockroach; HET: PE4; 2.80A {Periplaneta americana} Length = 163 Back     alignment and structure
>1z24_A Insecticyanin A form; blue biliprotein, INS-A, chromophore binding., lipid binding protein; HET: BLV; 2.60A {Manduca sexta} SCOP: b.60.1.1 Length = 189 Back     alignment and structure
>3fmz_A Retinol-binding protein 4; disease mutation, secreted, sensory transduction, transport, vision, vitamin A, transport protein; HET: 2T1; 2.90A {Homo sapiens} Length = 212 Back     alignment and structure
>1kt6_A RBP, plasma retinol-binding protein; transport protein; HET: RTL; 1.10A {Bos taurus} SCOP: b.60.1.1 PDB: 1erb_A* 1fem_A* 1fen_A* 1hbp_A* 1fel_A* 1kt4_A* 1kt3_A* 1kt7_A* 1hbq_A 1aqb_A* 1kt5_A* 1rlb_E* 1rbp_A* 1brq_A 1brp_A* 1jyd_A 1jyj_A 2wqa_E* 3bsz_E* 1qab_E* ... Length = 183 Back     alignment and structure
>2xst_A Lipocalin 15; transport protein, LCN15, MSFL2541; 1.63A {Homo sapiens} Length = 161 Back     alignment and structure
>1qwd_A Outer membrane lipoprotein BLC; bacterial lipocalin, lipid binding protein; 1.75A {Escherichia coli} SCOP: b.60.1.1 PDB: 2aco_A* 3mbt_A Length = 177 Back     alignment and structure
>3sao_A Extracellular fatty acid-binding protein; beta-barrel, siderophore binding protein, transport protein; HET: NKN DBH; 1.80A {Gallus gallus} PDB: 1jzu_A 2kt4_B* 2lbv_A* Length = 160 Back     alignment and structure
>3bx8_A Engineered human lipocalin 2; protein design, ligand binding protein, de novo protein, protein binding; HET: 1PE PE5; 2.00A {Homo sapiens} PDB: 3bx7_A* 3dtq_A 3dsz_A* 1l6m_A* 3tf6_A* 1x71_A* 1x89_A* 1x8u_A* 3fw4_A 3fw5_A 3k3l_A* 3pec_A* 3ped_A* 3tzs_A* 1ngl_A 1dfv_A* 1qqs_A* Length = 178 Back     alignment and structure
>3o22_A Prostaglandin-H2 D-isomerase; lipocalin, prostaglandin synthase; HET: OLA PLM; 1.40A {Homo sapiens} PDB: 3o19_A* 3o2y_A* 2wwp_A 2czt_A 2czu_A 2rq0_A 2e4j_A 2ktd_A* Length = 162 Back     alignment and structure
>2a2u_A Protein (alpha-2U-globulin); lipid binding protein; 2.50A {Rattus norvegicus} SCOP: b.60.1.1 PDB: 2a2g_A Length = 181 Back     alignment and structure
>1lf7_A Complement protein C8gamma; lipocalin, beta barrel, calyx, MAC, immune system; HET: CIT; 1.20A {Homo sapiens} SCOP: b.60.1.1 PDB: 1iw2_A* 2ovd_A* 2ove_A 2ova_A 2rd7_C 3ojy_C* 2qos_C Length = 182 Back     alignment and structure
>3s26_A Neutrophil gelatinase-associated lipocalin; beta-barrel, siderophore binding protein, N-linked glycosyla secreted, transport protein; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 2k23_A Length = 190 Back     alignment and structure
>3cbc_A Neutrophil gelatinase-associated lipocalin; siderocalin, NGAL, enterobactin, glycoprotein, pyrroli carboxylic acid, secreted; HET: DBS; 2.17A {Homo sapiens} PDB: 3hwg_A* 3hwf_A* 3hwe_A* 3u03_A* 3u0d_A* 3cmp_A* 3i0a_A* 3hwd_A 3t1d_A* 3by0_A* Length = 198 Back     alignment and structure
>1gm6_A SAL, salivary lipocalin; odorant-binding protein; HET: NAG; 2.13A {Sus scrofa} SCOP: b.60.1.1 Length = 175 Back     alignment and structure
>2l5p_A Lipocalin 12; beta barrel, transport protein; NMR {Rattus norvegicus} Length = 184 Back     alignment and structure
>3qkg_A Protein AMBP; beta barrel, binding protein, bound chromophore, human plasm system; 2.30A {Homo sapiens} Length = 193 Back     alignment and structure
>1ew3_A Allergen EQU C 1; lipocalin, beta barrel; 2.30A {Equus caballus} SCOP: b.60.1.1 Length = 159 Back     alignment and structure
>3kff_A MUP 4, major urinary protein 4; pheromone, lipocalin, beta barrel, DI bond, pheromone-binding, secreted, transport, transport Pro; 0.96A {Mus musculus} PDB: 3kfg_A 3kfh_A 3kfi_A 2l9c_A 2lb6_A 1i06_A 1i05_A* 1i04_A 1mup_A 1znd_A 1qy0_A* 1qy2_A* 1qy1_A 1zne_A 1zng_A 1znh_A 1znk_A* 1znl_A* 2dm5_A* 2ozq_A ... Length = 162 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2hlv_A Odorant-binding protein; domain swapping, transport protein; HET: LIK; 1.65A {Bos taurus} PDB: 1gt1_A* 1gt3_A* 1gt4_A* 1gt5_A* 1hn2_A* 1obp_A 1g85_A 1pbo_A* Length = 160 Back     alignment and structure
>3l4r_A Allergen DOG 2, minor allergen CAN F 2; lipocalin allergen, disulfide bond, secreted, TRAN lipid binding protein; 1.45A {Canis familiaris} Length = 170 Back     alignment and structure
>1xki_A VON ebner'S gland protein; beta barrel, ligand binding protein, transport protein; 1.80A {Homo sapiens} SCOP: b.60.1.1 PDB: 3eyc_A Length = 162 Back     alignment and structure
>1dzk_A PIG OBP, odorant-binding protein; lipocalin, transport, olfaction, sensory transduction; HET: PRZ; 1.48A {Sus scrofa} SCOP: b.60.1.1 PDB: 1dzj_A* 1dzm_A* 1dzp_A* 1e00_A* 1e02_A* 1e06_A* 1hqp_A* 1a3y_A Length = 157 Back     alignment and structure
>1exs_A Beta-lactoglobulin; lipocalin fold, lipid-binding protein; 2.39A {Sus scrofa} SCOP: b.60.1.1 Length = 160 Back     alignment and structure
>1bj7_A D 2; allergen, lipocalin; 1.80A {Bos taurus} SCOP: b.60.1.1 Length = 156 Back     alignment and structure
>2ra6_A Trichosurin; lipocalin, beta barrel, glycoprotein, MILK protein, secreted, transport, transport protein; 1.50A {Trichosurus vulpecula} PDB: 2r73_A 2r74_A Length = 166 Back     alignment and structure
>1e5p_A Aphrodisin; lipocalin, pheromone, hamster,; HET: MSE; 1.63A {Mesocricetus auratus} SCOP: b.60.1.1 Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query193
3ebw_A163 PER A 4 allergen; beta barrel, cockroach; HET: PE4 99.94
2hzq_A174 Apolipoprotein D, APO-D, APOD; lipocalin, beta bar 99.93
1z24_A189 Insecticyanin A form; blue biliprotein, INS-A, chr 99.9
1qwd_A177 Outer membrane lipoprotein BLC; bacterial lipocali 99.9
1kxo_A184 DIGA16; lipocalin, anticalin, genetical engineerin 99.89
1gka_B174 Crustacyanin A2 subunit; lipocalin, lobster, astax 99.89
1i4u_A181 Crustacyanin; lipocalin fold, antiparallel beta ba 99.89
3fmz_A212 Retinol-binding protein 4; disease mutation, secre 99.88
1kt6_A183 RBP, plasma retinol-binding protein; transport pro 99.86
1gm6_A175 SAL, salivary lipocalin; odorant-binding protein; 99.84
2xst_A161 Lipocalin 15; transport protein, LCN15, MSFL2541; 99.83
3bx8_A178 Engineered human lipocalin 2; protein design, liga 99.83
3s26_A190 Neutrophil gelatinase-associated lipocalin; beta-b 99.82
3cbc_A198 Neutrophil gelatinase-associated lipocalin; sidero 99.82
1lf7_A182 Complement protein C8gamma; lipocalin, beta barrel 99.82
1ew3_A159 Allergen EQU C 1; lipocalin, beta barrel; 2.30A {E 99.82
2l5p_A184 Lipocalin 12; beta barrel, transport protein; NMR 99.82
3o22_A162 Prostaglandin-H2 D-isomerase; lipocalin, prostagla 99.8
1beb_A162 Beta-lactoglobulin; lipocalin, MILK WHEY protein, 99.8
2a2u_A181 Protein (alpha-2U-globulin); lipid binding protein 99.79
1bj7_A156 D 2; allergen, lipocalin; 1.80A {Bos taurus} SCOP: 99.79
1xki_A162 VON ebner'S gland protein; beta barrel, ligand bin 99.78
1e5p_A151 Aphrodisin; lipocalin, pheromone, hamster,; HET: M 99.78
2hlv_A160 Odorant-binding protein; domain swapping, transpor 99.77
1dzk_A157 PIG OBP, odorant-binding protein; lipocalin, trans 99.77
2ra6_A166 Trichosurin; lipocalin, beta barrel, glycoprotein, 99.77
1exs_A160 Beta-lactoglobulin; lipocalin fold, lipid-binding 99.76
3sao_A160 Extracellular fatty acid-binding protein; beta-bar 99.75
1epa_A164 Epididymal retinoic acid-binding protein; 2.10A {R 99.74
3qkg_A193 Protein AMBP; beta barrel, binding protein, bound 99.72
3kff_A162 MUP 4, major urinary protein 4; pheromone, lipocal 99.69
3l4r_A170 Allergen DOG 2, minor allergen CAN F 2; lipocalin 99.62
4ge1_A197 Biogenic amine-binding protein; lipocalin binding 99.57
1x8p_A184 Nitrophorin 4, NP4; lipocalin, beta barrel, ferric 99.53
1pm1_X180 Nitrophorin 2, NP2, prolixin-S; beta barrel, lipoc 99.52
3ebk_A176 Allergen BLA G 4; beta barrel, cockroach, glycopro 99.24
3kq0_A192 Alpha-1-acid glycoprotein 1; plasma protein, polym 99.2
1avg_I142 Triabin; bovine thrombin, thrombin inhibitor, comp 99.09
3fiq_A157 OBP1, RCG36470, odorant-binding protein 1F; lipoca 98.86
3cqn_A185 Violaxanthin DE-epoxidase, chloroplast; lipocalin, 98.7
3bx6_A192 Alpha-1-acid glycoprotein; plasma protein, acute p 97.87
2yg2_A172 Apolipoprotein M; lipid transport, lipocalin, HDL; 80.11
>3ebw_A PER A 4 allergen; beta barrel, cockroach; HET: PE4; 2.80A {Periplaneta americana} Back     alignment and structure
Probab=99.94  E-value=2e-26  Score=184.06  Aligned_cols=117  Identities=20%  Similarity=0.233  Sum_probs=99.3

Q ss_pred             CceeEEEeeCCCCcEEEEeeEEecCCCCeEE-eeeeeEEEcCCcccccchhhhccceeeeceeEEEEe-cccCCCCCCEE
Q 029469            1 MIEGVYTFDKEKPAIQVDTFCVHGGPDGYIT-GIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFP-TLPFIPKEPYD   78 (193)
Q Consensus         1 ~~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~-~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~-~~p~~p~~dY~   78 (193)
                      ++.|+|+++ ++|+|.|.|+| .   +|.+. .+.|+|++.++..++ +.              |+|. .+|+  .++||
T Consensus        39 ~~~a~Y~l~-~dg~i~V~n~~-~---~g~~~~~~~G~a~~~~~~~~~-l~--------------v~f~~~~~~--~~~y~   96 (163)
T 3ebw_A           39 CEYDKYTLD-ENGVIQVTSVA-Y---TNSIRGFITSTGTVPSWTEDT-FD--------------IAYGDDETW--SSTYF   96 (163)
T ss_dssp             CEEEEEEEC-TTSCEEEEEEE-E---CSTTSSEEEEEEECCCBCSSE-EE--------------EBC--------CEEEE
T ss_pred             cceEEEEEC-CCCeEEEEEEe-e---CCeEEEEEEEEEEeCCCCCCc-eE--------------EEeccCCCc--cccEE
Confidence            478999998 68999999999 4   68898 999999998766554 33              6663 2343  78999


Q ss_pred             EEEEcCCCEEEEEeec----CceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC-CCCc
Q 029469           79 VIATDYDNFALVSGAK----DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ-DCEV  139 (193)
Q Consensus        79 Vl~TDYdnYAiV~~c~----~~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q-~C~~  139 (193)
                      |++|||++|||||+|.    +.+++|||||+|+++++++++++++++++||+.++|++++| +|+.
T Consensus        97 Vl~tDY~~Ya~v~~c~~~~~~~~~~wilsR~~~l~~~~~~~~~~~~~~~G~~~~~l~~~~q~~C~~  162 (163)
T 3ebw_A           97 MVGTDYQTYSIVAGCLDNDYSRHLYWIASHETSFDDATKAKVNEVLAPYNLSLDDMEPVDQSYCVQ  162 (163)
T ss_dssp             EEEECSSSCEEEEEEETTEEEEEEEEEEESSSSCCHHHHHHHHHHHGGGTCCGGGSEECCCCTTTT
T ss_pred             EEEeCCCCEEEEEEecCCCccceEEEEEeCCCCCCHHHHHHHHHHHHHcCCCHHHeEECCCCCCCC
Confidence            9999999999999984    35899999999999999999999999999999999999999 5974
>2hzq_A Apolipoprotein D, APO-D, APOD; lipocalin, beta barrel, bilin-binding protein, transport protein; HET: STR; 1.80A {Homo sapiens} PDB: 2hzr_A Back     alignment and structure
>1z24_A Insecticyanin A form; blue biliprotein, INS-A, chromophore binding., lipid binding protein; HET: BLV; 2.60A {Manduca sexta} SCOP: b.60.1.1 Back     alignment and structure
>1qwd_A Outer membrane lipoprotein BLC; bacterial lipocalin, lipid binding protein; 1.75A {Escherichia coli} SCOP: b.60.1.1 PDB: 2aco_A* 3mbt_A Back     alignment and structure
>1kxo_A DIGA16; lipocalin, anticalin, genetical engineering, digoxigenin, ligand binding protein; 1.80A {Pieris brassicae} SCOP: b.60.1.1 PDB: 1lke_A* 1lnm_A* 1n0s_A* 1t0v_A 1bbp_A* Back     alignment and structure
>1gka_B Crustacyanin A2 subunit; lipocalin, lobster, astaxanthin, bathochromic, coloration; HET: AXT D12 EPE; 3.23A {Homarus gammarus} SCOP: b.60.1.1 Back     alignment and structure
>1i4u_A Crustacyanin; lipocalin fold, antiparallel beta barrel, transport protein; 1.15A {Synthetic} SCOP: b.60.1.1 PDB: 1obq_A 1obu_A 1s2p_A 1h91_A 1gka_A 1s44_A Back     alignment and structure
>3fmz_A Retinol-binding protein 4; disease mutation, secreted, sensory transduction, transport, vision, vitamin A, transport protein; HET: 2T1; 2.90A {Homo sapiens} Back     alignment and structure
>1kt6_A RBP, plasma retinol-binding protein; transport protein; HET: RTL; 1.10A {Bos taurus} SCOP: b.60.1.1 PDB: 1erb_A* 1fem_A* 1fen_A* 1hbp_A* 1fel_A* 1kt4_A* 1kt3_A* 1kt7_A* 1hbq_A 1aqb_A* 1kt5_A* 1rlb_E* 1rbp_A* 1brq_A 1brp_A* 1jyd_A 1jyj_A 2wqa_E* 3bsz_E* 1qab_E* ... Back     alignment and structure
>1gm6_A SAL, salivary lipocalin; odorant-binding protein; HET: NAG; 2.13A {Sus scrofa} SCOP: b.60.1.1 Back     alignment and structure
>2xst_A Lipocalin 15; transport protein, LCN15, MSFL2541; 1.63A {Homo sapiens} Back     alignment and structure
>3bx8_A Engineered human lipocalin 2; protein design, ligand binding protein, de novo protein, protein binding; HET: 1PE PE5; 2.00A {Homo sapiens} PDB: 3bx7_A* 3dtq_A 3dsz_A* 1l6m_A* 3tf6_A* 1x71_A* 1x89_A* 1x8u_A* 3fw4_A 3fw5_A 3k3l_A* 3pec_A* 3ped_A* 3tzs_A* 1ngl_A 1dfv_A* 1qqs_A* Back     alignment and structure
>3s26_A Neutrophil gelatinase-associated lipocalin; beta-barrel, siderophore binding protein, N-linked glycosyla secreted, transport protein; HET: NAG BMA MAN; 1.80A {Mus musculus} SCOP: b.60.1.1 PDB: 2k23_A Back     alignment and structure
>3cbc_A Neutrophil gelatinase-associated lipocalin; siderocalin, NGAL, enterobactin, glycoprotein, pyrroli carboxylic acid, secreted; HET: DBS; 2.17A {Homo sapiens} PDB: 3hwg_A* 3hwf_A* 3hwe_A* 3u03_A* 3u0d_A* 3cmp_A* 3i0a_A* 3hwd_A 3t1d_A* 3by0_A* Back     alignment and structure
>1lf7_A Complement protein C8gamma; lipocalin, beta barrel, calyx, MAC, immune system; HET: CIT; 1.20A {Homo sapiens} SCOP: b.60.1.1 PDB: 1iw2_A* 2ovd_A* 2ove_A 2ova_A 2rd7_C 3ojy_C* 2qos_C Back     alignment and structure
>1ew3_A Allergen EQU C 1; lipocalin, beta barrel; 2.30A {Equus caballus} SCOP: b.60.1.1 Back     alignment and structure
>2l5p_A Lipocalin 12; beta barrel, transport protein; NMR {Rattus norvegicus} Back     alignment and structure
>3o22_A Prostaglandin-H2 D-isomerase; lipocalin, prostaglandin synthase; HET: OLA PLM; 1.40A {Homo sapiens} PDB: 3o19_A* 3o2y_A* 2wwp_A 2czt_A 2czu_A 2rq0_A 2e4j_A 2ktd_A* Back     alignment and structure
>1beb_A Beta-lactoglobulin; lipocalin, MILK WHEY protein, bovine, retinol-binding; 1.80A {Bos taurus} SCOP: b.60.1.1 PDB: 3nq3_A* 1b0o_A 1bsq_A 1gx8_A* 1gx9_A* 1gxa_A* 2gj5_A* 2r56_A* 3npo_A 1b8e_A* 3nq9_A* 3qzj_A* 3qzk_A* 3ueu_A* 3uev_A* 3uew_A* 3uex_A* 4dq3_A* 4dq4_A* 1qg5_A ... Back     alignment and structure
>2a2u_A Protein (alpha-2U-globulin); lipid binding protein; 2.50A {Rattus norvegicus} SCOP: b.60.1.1 PDB: 2a2g_A Back     alignment and structure
>1bj7_A D 2; allergen, lipocalin; 1.80A {Bos taurus} SCOP: b.60.1.1 Back     alignment and structure
>1xki_A VON ebner'S gland protein; beta barrel, ligand binding protein, transport protein; 1.80A {Homo sapiens} SCOP: b.60.1.1 PDB: 3eyc_A Back     alignment and structure
>1e5p_A Aphrodisin; lipocalin, pheromone, hamster,; HET: MSE; 1.63A {Mesocricetus auratus} SCOP: b.60.1.1 Back     alignment and structure
>2hlv_A Odorant-binding protein; domain swapping, transport protein; HET: LIK; 1.65A {Bos taurus} PDB: 1gt1_A* 1gt3_A* 1gt4_A* 1gt5_A* 1hn2_A* 1obp_A 1g85_A 1pbo_A* Back     alignment and structure
>1dzk_A PIG OBP, odorant-binding protein; lipocalin, transport, olfaction, sensory transduction; HET: PRZ; 1.48A {Sus scrofa} SCOP: b.60.1.1 PDB: 1dzj_A* 1dzm_A* 1dzp_A* 1e00_A* 1e02_A* 1e06_A* 1hqp_A* 1a3y_A Back     alignment and structure
>2ra6_A Trichosurin; lipocalin, beta barrel, glycoprotein, MILK protein, secreted, transport, transport protein; 1.50A {Trichosurus vulpecula} PDB: 2r73_A 2r74_A Back     alignment and structure
>1exs_A Beta-lactoglobulin; lipocalin fold, lipid-binding protein; 2.39A {Sus scrofa} SCOP: b.60.1.1 Back     alignment and structure
>3sao_A Extracellular fatty acid-binding protein; beta-barrel, siderophore binding protein, transport protein; HET: NKN DBH; 1.80A {Gallus gallus} SCOP: b.60.1.1 PDB: 1jzu_A 2kt4_B* 2lbv_A* Back     alignment and structure
>1epa_A Epididymal retinoic acid-binding protein; 2.10A {Rattus norvegicus} SCOP: b.60.1.1 PDB: 1epb_A* Back     alignment and structure
>3qkg_A Protein AMBP; beta barrel, binding protein, bound chromophore, human plasm system; 2.30A {Homo sapiens} Back     alignment and structure
>3kff_A MUP 4, major urinary protein 4; pheromone, lipocalin, beta barrel, DI bond, pheromone-binding, secreted, transport, transport Pro; 0.96A {Mus musculus} SCOP: b.60.1.1 PDB: 3kfg_A 3kfh_A 3kfi_A 2l9c_A 2lb6_A 1i06_A 1i05_A* 1i04_A 1mup_A 1znd_A 1qy0_A* 1qy2_A* 1qy1_A 1zne_A 1zng_A 1znh_A 1znk_A* 1znl_A* 2dm5_A* 2ozq_A ... Back     alignment and structure
>3l4r_A Allergen DOG 2, minor allergen CAN F 2; lipocalin allergen, disulfide bond, secreted, TRAN lipid binding protein; 1.45A {Canis familiaris} Back     alignment and structure
>4ge1_A Biogenic amine-binding protein; lipocalin binding protein, serotonin, norepinephrine, saliva amine-binding protein; HET: TSS; 2.15A {Rhodnius prolixus} PDB: 4get_A* 4hfo_A Back     alignment and structure
>1x8p_A Nitrophorin 4, NP4; lipocalin, beta barrel, ferric heme, ligand binding protein; HET: HEM; 0.85A {Rhodnius prolixus} SCOP: b.60.1.1 PDB: 1d3s_A* 1eqd_A* 1erx_A* 1ike_A* 1ikj_A* 1d2u_A* 1ml7_A* 1np4_A* 1u0x_A* 1x8n_A* 1koi_A* 1x8o_A* 1x8q_A* 1ywa_A* 1ywb_A* 1ywc_A* 1ywd_A* 2at4_X* 2at5_X* 2at6_X* ... Back     alignment and structure
>1pm1_X Nitrophorin 2, NP2, prolixin-S; beta barrel, lipocalin, imidazole, ferric heme, blood clotting inhibitor; HET: HEM; 1.10A {Rhodnius prolixus} SCOP: b.60.1.1 PDB: 2all_X* 2amm_X* 2hys_A* 1euo_A* 1pee_A* 1t68_X* 2acp_X* 2ah7_X* 2al0_X* 2gtf_X* 2a3f_X* 2eu7_X* 2asn_X* Back     alignment and structure
>3ebk_A Allergen BLA G 4; beta barrel, cockroach, glycoprotein, secreted; 1.90A {Blattella germanica} Back     alignment and structure
>3kq0_A Alpha-1-acid glycoprotein 1; plasma protein, polymorphism, acute phase protein, secreted, pyrrolidone carboxylic acid, lipocalin; 1.80A {Homo sapiens} PDB: 3apu_A* 3apv_A* 3apw_A* 3apx_A* Back     alignment and structure
>1avg_I Triabin; bovine thrombin, thrombin inhibitor, complex (blood coagulation/inhibitor); 2.60A {Triatoma pallidipennis} SCOP: b.60.1.3 Back     alignment and structure
>3fiq_A OBP1, RCG36470, odorant-binding protein 1F; lipocalin, oderant-binding protein, transport protein; 1.60A {Rattus norvegicus} SCOP: b.60.1.0 Back     alignment and structure
>3cqn_A Violaxanthin DE-epoxidase, chloroplast; lipocalin, enzyme, xanthophyll cycle, non photochemical quenching, NPQ, antheraxanthin, zeaxanthin; 2.00A {Arabidopsis thaliana} PDB: 3cqr_A Back     alignment and structure
>2yg2_A Apolipoprotein M; lipid transport, lipocalin, HDL; HET: S1P FLC; 1.70A {Homo sapiens} PDB: 2wex_A* 2wew_A* 2xkl_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 193
d1epba_160 b.60.1.1 (A:) Retinoic acid-binding protein {Rat ( 1e-16
d1gkab_174 b.60.1.1 (B:) Alpha-crustacyanin {European lobster 2e-13
d1z24a1189 b.60.1.1 (A:1-189) Insecticyanin {Tobacco hornworm 4e-13
d1kxoa_171 b.60.1.1 (A:) Bilin-binding protein {Cabbage butte 4e-13
d1qwda_167 b.60.1.1 (A:) Outer membrane lipoprotein Blc {Esch 6e-13
d1lf7a_171 b.60.1.1 (A:) Complement protein C8gamma {Human (H 1e-12
d1i4ua_181 b.60.1.1 (A:) Alpha-crustacyanin {European lobster 3e-12
d1kt7a_175 b.60.1.1 (A:) Retinol binding protein {Cow (Bos ta 7e-12
d1x71a1174 b.60.1.1 (A:4-177) Neutrophil gelatinase-associate 8e-11
d1ew3a_159 b.60.1.1 (A:) Lipocalin allergen {Horse (Equus cab 3e-10
d1jzua_157 b.60.1.1 (A:) Lipocalin q83 {Common quail (Coturni 4e-10
d1gm6a_158 b.60.1.1 (A:) Salivary lipocalin {Pig (Sus scrofa) 6e-09
d1beba_156 b.60.1.1 (A:) beta-Lactoglobulin {Cow (Bos taurus) 1e-08
d1exsa_160 b.60.1.1 (A:) beta-Lactoglobulin {Pig (Sus scrofa) 4e-08
d2a2ua_158 b.60.1.1 (A:) Major urinary protein/alpha-2u-globu 8e-08
d1pm1x_180 b.60.1.1 (X:) Nitrophorin 2 (prolixin-s) {Rhodnius 1e-07
d1znda1157 b.60.1.1 (A:1-157) Major urinary protein/alpha-2u- 3e-07
d1bj7a_150 b.60.1.1 (A:) Lipocalin allergen {Cow (Bos taurus) 5e-07
d1gt1a_158 b.60.1.1 (A:) Odorant-binding protein {Cow (Bos ta 7e-04
d1xkia_139 b.60.1.1 (A:) Von Ebner's gland protein (VEGP, tea 0.002
d1dzka_148 b.60.1.1 (A:) Odorant-binding protein {Pig (Sus sc 0.004
>d1epba_ b.60.1.1 (A:) Retinoic acid-binding protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 160 Back     information, alignment and structure

class: All beta proteins
fold: Lipocalins
superfamily: Lipocalins
family: Retinol binding protein-like
domain: Retinoic acid-binding protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 71.0 bits (173), Expect = 1e-16
 Identities = 23/147 (15%), Positives = 45/147 (30%), Gaps = 16/147 (10%)

Query: 6   YTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLR 65
                ++  +      +        T       C            LEK    +G    +
Sbjct: 25  PGLAHKEEKMGAMVVELKENLLALTTTYYSEDHC-----------VLEKVTATEGDGPAK 73

Query: 66  FPTLPFIPKEPYDVIATDYDNFALV-----SGAKDKSFIQIYSRTPTPGPEFIEKYKSYL 120
           F       K+   V ATDY  +A++             +++YSR+     E +  ++   
Sbjct: 74  FQVTRLSGKKEVVVEATDYLTYAIIDITSLVAGAVHRTMKLYSRSLDDNGEALYNFRKIT 133

Query: 121 ANFGYDPNKIKDTPQDCEVISNSQLAA 147
           ++ G+    +     D   +   Q AA
Sbjct: 134 SDHGFSETDLYILKHDLTCVKVLQSAA 160
>d1gkab_ b.60.1.1 (B:) Alpha-crustacyanin {European lobster (Homarus gammarus) [TaxId: 6707]} Length = 174 Back     information, alignment and structure
>d1z24a1 b.60.1.1 (A:1-189) Insecticyanin {Tobacco hornworm (Manduca sexta) [TaxId: 7130]} Length = 189 Back     information, alignment and structure
>d1kxoa_ b.60.1.1 (A:) Bilin-binding protein {Cabbage butterfly (Pieris brassicae) [TaxId: 7116]} Length = 171 Back     information, alignment and structure
>d1qwda_ b.60.1.1 (A:) Outer membrane lipoprotein Blc {Escherichia coli [TaxId: 562]} Length = 167 Back     information, alignment and structure
>d1lf7a_ b.60.1.1 (A:) Complement protein C8gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 171 Back     information, alignment and structure
>d1i4ua_ b.60.1.1 (A:) Alpha-crustacyanin {European lobster (Homarus gammarus) [TaxId: 6707]} Length = 181 Back     information, alignment and structure
>d1kt7a_ b.60.1.1 (A:) Retinol binding protein {Cow (Bos taurus) [TaxId: 9913]} Length = 175 Back     information, alignment and structure
>d1x71a1 b.60.1.1 (A:4-177) Neutrophil gelatinase-associated lipocalin (NGAL) {Human (Homo sapiens) [TaxId: 9606]} Length = 174 Back     information, alignment and structure
>d1ew3a_ b.60.1.1 (A:) Lipocalin allergen {Horse (Equus caballus), equ c 1 [TaxId: 9796]} Length = 159 Back     information, alignment and structure
>d1jzua_ b.60.1.1 (A:) Lipocalin q83 {Common quail (Coturnix coturnix) [TaxId: 9091]} Length = 157 Back     information, alignment and structure
>d1gm6a_ b.60.1.1 (A:) Salivary lipocalin {Pig (Sus scrofa) [TaxId: 9823]} Length = 158 Back     information, alignment and structure
>d1beba_ b.60.1.1 (A:) beta-Lactoglobulin {Cow (Bos taurus) [TaxId: 9913]} Length = 156 Back     information, alignment and structure
>d1exsa_ b.60.1.1 (A:) beta-Lactoglobulin {Pig (Sus scrofa) [TaxId: 9823]} Length = 160 Back     information, alignment and structure
>d2a2ua_ b.60.1.1 (A:) Major urinary protein/alpha-2u-globulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 158 Back     information, alignment and structure
>d1pm1x_ b.60.1.1 (X:) Nitrophorin 2 (prolixin-s) {Rhodnius prolixus [TaxId: 13249]} Length = 180 Back     information, alignment and structure
>d1znda1 b.60.1.1 (A:1-157) Major urinary protein/alpha-2u-globulin {Mouse (Mus musculus) [TaxId: 10090]} Length = 157 Back     information, alignment and structure
>d1bj7a_ b.60.1.1 (A:) Lipocalin allergen {Cow (Bos taurus), bos d 2 [TaxId: 9913]} Length = 150 Back     information, alignment and structure
>d1gt1a_ b.60.1.1 (A:) Odorant-binding protein {Cow (Bos taurus) [TaxId: 9913]} Length = 158 Back     information, alignment and structure
>d1xkia_ b.60.1.1 (A:) Von Ebner's gland protein (VEGP, tear lipocalin) {Human (Homo sapiens) [TaxId: 9606]} Length = 139 Back     information, alignment and structure
>d1dzka_ b.60.1.1 (A:) Odorant-binding protein {Pig (Sus scrofa) [TaxId: 9823]} Length = 148 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query193
d1i4ua_181 Alpha-crustacyanin {European lobster (Homarus gamm 99.89
d1kxoa_171 Bilin-binding protein {Cabbage butterfly (Pieris b 99.87
d1gkab_174 Alpha-crustacyanin {European lobster (Homarus gamm 99.87
d1kt7a_175 Retinol binding protein {Cow (Bos taurus) [TaxId: 99.86
d1z24a1189 Insecticyanin {Tobacco hornworm (Manduca sexta) [T 99.82
d1lf7a_171 Complement protein C8gamma {Human (Homo sapiens) [ 99.81
d1x71a1174 Neutrophil gelatinase-associated lipocalin (NGAL) 99.8
d1qwda_167 Outer membrane lipoprotein Blc {Escherichia coli [ 99.79
d1ew3a_159 Lipocalin allergen {Horse (Equus caballus), equ c 99.74
d1jzua_157 Lipocalin q83 {Common quail (Coturnix coturnix) [T 99.73
d1epba_160 Retinoic acid-binding protein {Rat (Rattus norvegi 99.73
d1gm6a_158 Salivary lipocalin {Pig (Sus scrofa) [TaxId: 9823] 99.73
d1beba_156 beta-Lactoglobulin {Cow (Bos taurus) [TaxId: 9913] 99.7
d1pm1x_180 Nitrophorin 2 (prolixin-s) {Rhodnius prolixus [Tax 99.69
d1exsa_160 beta-Lactoglobulin {Pig (Sus scrofa) [TaxId: 9823] 99.69
d1znda1157 Major urinary protein/alpha-2u-globulin {Mouse (Mu 99.66
d1x8qa_184 Nitrophorin 4 {Rhodnius prolixus [TaxId: 13249]} 99.66
d2a2ua_158 Major urinary protein/alpha-2u-globulin {Rat (Ratt 99.62
d1bj7a_150 Lipocalin allergen {Cow (Bos taurus), bos d 2 [Tax 99.52
d1xkia_139 Von Ebner's gland protein (VEGP, tear lipocalin) { 99.52
d1avgi_142 Thrombin inhibitor {Triatomine bug (Triatoma palli 99.42
d1gt1a_158 Odorant-binding protein {Cow (Bos taurus) [TaxId: 99.34
d1dzka_148 Odorant-binding protein {Pig (Sus scrofa) [TaxId: 99.16
d1e5pa_149 Aphrodisin, a sex pheromone {Golden hamster (Mesoc 98.84
>d1i4ua_ b.60.1.1 (A:) Alpha-crustacyanin {European lobster (Homarus gammarus) [TaxId: 6707]} Back     information, alignment and structure
class: All beta proteins
fold: Lipocalins
superfamily: Lipocalins
family: Retinol binding protein-like
domain: Alpha-crustacyanin
species: European lobster (Homarus gammarus) [TaxId: 6707]

Probab=99.89  E-value=2e-23  Score=166.31  Aligned_cols=118  Identities=22%  Similarity=0.339  Sum_probs=96.8

Q ss_pred             ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEEE
Q 029469            2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIA   81 (193)
Q Consensus         2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl~   81 (193)
                      +.+.|+++ +++.+.+.+.+.   .+|....+.|++.+.+.+ .+++              .++|+.   .+.++||||+
T Consensus        52 ~~~~yt~~-~~~~~~~~~~~~---~~G~~~~~~g~a~~~~~~-~~kl--------------~v~f~~---~~~~~y~Vl~  109 (181)
T d1i4ua_          52 VRNEYSFD-GKQFVIESTGIA---YDGNLLKRNGKLYPNPFG-EPHL--------------SIDYEN---SFAAPLVILE  109 (181)
T ss_dssp             EEEEEEEC-SSCEEEEEEEEE---TTSCEEEEEEEEEECTTC-CSSE--------------EEEETT---SCEEEEEEEE
T ss_pred             eEEEEEec-CCcEEEEEEEEe---cCCCEEEEEEEEEeCCCC-CceE--------------EEEccC---ccccceEEEE
Confidence            57899997 677776666554   689999999999876543 2332              366632   2367999999


Q ss_pred             EcCCCEEEEEeecC------ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCcCC
Q 029469           82 TDYDNFALVSGAKD------KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEVIS  141 (193)
Q Consensus        82 TDYdnYAiV~~c~~------~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~~~  141 (193)
                      |||++||+||+|..      .+++|||||+|+++++.+++++++++++|||.++|+.++|  +|++-+
T Consensus       110 tDy~~Yavvy~c~~~~~~~~~~~~wIlsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~Q~~~C~~~~  177 (181)
T d1i4ua_         110 TDYSNYACLYSCIDYNFGYHSDFSFIFSRSANLADQYVKKCEAAFKNINVDTTRFVKTVQGSSCPYDT  177 (181)
T ss_dssp             ECSSSEEEEEEEEECTTSEEEEEEEEEESSSSCCHHHHHHHHHHHHHTTCCGGGEEECCCSTTSCHHH
T ss_pred             EccCceeEEEEeeeccCCCceeEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHeEECCCCCCCCCCc
Confidence            99999999999963      3789999999999999999999999999999999999999  498743
>d1kxoa_ b.60.1.1 (A:) Bilin-binding protein {Cabbage butterfly (Pieris brassicae) [TaxId: 7116]} Back     information, alignment and structure
>d1gkab_ b.60.1.1 (B:) Alpha-crustacyanin {European lobster (Homarus gammarus) [TaxId: 6707]} Back     information, alignment and structure
>d1kt7a_ b.60.1.1 (A:) Retinol binding protein {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1z24a1 b.60.1.1 (A:1-189) Insecticyanin {Tobacco hornworm (Manduca sexta) [TaxId: 7130]} Back     information, alignment and structure
>d1lf7a_ b.60.1.1 (A:) Complement protein C8gamma {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1x71a1 b.60.1.1 (A:4-177) Neutrophil gelatinase-associated lipocalin (NGAL) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qwda_ b.60.1.1 (A:) Outer membrane lipoprotein Blc {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ew3a_ b.60.1.1 (A:) Lipocalin allergen {Horse (Equus caballus), equ c 1 [TaxId: 9796]} Back     information, alignment and structure
>d1jzua_ b.60.1.1 (A:) Lipocalin q83 {Common quail (Coturnix coturnix) [TaxId: 9091]} Back     information, alignment and structure
>d1epba_ b.60.1.1 (A:) Retinoic acid-binding protein {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1gm6a_ b.60.1.1 (A:) Salivary lipocalin {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1beba_ b.60.1.1 (A:) beta-Lactoglobulin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1pm1x_ b.60.1.1 (X:) Nitrophorin 2 (prolixin-s) {Rhodnius prolixus [TaxId: 13249]} Back     information, alignment and structure
>d1exsa_ b.60.1.1 (A:) beta-Lactoglobulin {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1znda1 b.60.1.1 (A:1-157) Major urinary protein/alpha-2u-globulin {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1x8qa_ b.60.1.1 (A:) Nitrophorin 4 {Rhodnius prolixus [TaxId: 13249]} Back     information, alignment and structure
>d2a2ua_ b.60.1.1 (A:) Major urinary protein/alpha-2u-globulin {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1bj7a_ b.60.1.1 (A:) Lipocalin allergen {Cow (Bos taurus), bos d 2 [TaxId: 9913]} Back     information, alignment and structure
>d1xkia_ b.60.1.1 (A:) Von Ebner's gland protein (VEGP, tear lipocalin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1avgi_ b.60.1.3 (I:) Thrombin inhibitor {Triatomine bug (Triatoma pallidipennis) [TaxId: 30077]} Back     information, alignment and structure
>d1gt1a_ b.60.1.1 (A:) Odorant-binding protein {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1dzka_ b.60.1.1 (A:) Odorant-binding protein {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1e5pa_ b.60.1.1 (A:) Aphrodisin, a sex pheromone {Golden hamster (Mesocricetus auratus) [TaxId: 10036]} Back     information, alignment and structure