Citrus Sinensis ID: 029500

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190--
Protein Sequence
MATTLLSHSLLSASILNSNNNCKFCYVGSIQSSKPVWKSCKVRAIKEETEEKTSSSASASAEEITKKYGLEAGLWQIFRSKEEGNAEGDKKKSRGDQTKELLAKYGGAYLATSITLSLISFSLCYVLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRFPPTVALTPIVARWIGKKVENEK
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccHHHHcccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccHHHHHHHHHHHHHccccccccEEEEHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHcccccccEEEEEEEcccccccccccEEEEEEEcccccccccccccHHHHHHHHccHHcHHEEEEccccccccccccccHHHHHHHHHHHHHHHHHHEHHHHHHHHHHHHHHEHHccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MATTLLSHSLLSASIlnsnnnckfcyvgsiqsskpvwkSCKVRAIKEeteektsssasASAEEITKKYGLEAGLWQIFRskeegnaegdkkksrgDQTKELLAKYGGAYLATSITLSLISFSLCYVLIAAGVDVQALLQKVgistdatgeKVGIFALAYAahkaaspirfpptvalTPIVARWIgkkvenek
Flexible Loop (DISEMBL)
MATTLLSHSLLSASILNSNNNCKFCYVgsiqsskpvwkSCKVRAIkeeteektsssasasaeeITKKYGLEAGLWQIFRSkeegnaegdkkksrgdqTKELLAKYGGAYLATSITLSLISFSLCYVLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKaaspirfpptvaLTPIVARwigkkvenek
Low Complexity Region (SEG)
MATTllshsllsasilnsnnnCKFCYVGSIQSSKPVWKSCKVRaikeeteektsssasasaeeitkkYGLEAGLWQIFRSKEEGNAEGDKKKSRGDQTKELLAKYGGAYlatsitlslisfslCYVLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRFPPTVALTPIVARWIGKKVENEK
Disordered region (IsUnstruct)
*********LLSASILNSNNNCKFCYVGSIQSSKPVWKSCKVRA**********************KYGLEAGLWQIF**********************LLAKYGGAYLATSITLSLISFSLCYVLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRFPPTVALTPIVARWIGK******
Disordered Region (DISOPRED)
****************************************************************************************************LLAKYGGAYLATSITLSLISFSLCYVLIAAGVDVQALLQKVGIST****EKVGIFALAYAAHKAASPIRFPPTVALTPIVARW**K******
Disordered Region (DISEMBL)
MATTLLSHSLLSASILNSNNNCKFCYVGSIQSSKPVWKSCKVRAI*****************EITKKYGLEAGLWQIFRSKE*************DQTKELLAKYGGAYLATSITLSLISFSLCYVLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRFPPTVALTPIVARWIGKKVENEK
Disordered Region (DISPRO)
*********LLSASILNSNNNCKFCYVGSIQSSKPVWKSCKVRAIKEET***********AEEITKKYGLEAGLWQIFRSK***********SRGDQTKELLAKYGGAYLATSITLSLISFSLCYVLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRFPPTVALTPIVARWIGKK*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATTLLSHSLLSASILNSNNNCKFCYVGSIQSSKPVWKSCKVRAIKEETEEKTSSSASASAEEITKKYGLEAGLWQIFRSKEEGNAEGDKKKSRGDQTKELLAKYGGAYLATSITLSLISFSLCYVLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRFPPTVALTPIVARWIGKKVENEK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	192	2.2.26 [Sep-21-2011]
Q96KR6	192	Protein FAM210B OS=Homo s	yes	no	0.510	0.510	0.323	4e-10
Q9D8B6	190	Protein FAM210B OS=Mus mu	yes	no	0.552	0.557	0.312	1e-09

>sp|Q96KR6|F210B_HUMAN Protein FAM210B OS=Homo sapiens GN=FAM210B PE=1 SV=2

 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 4/102 (3%)

Query: 89  DKKKSRGDQTKELLAKYGGAYLATSITLSLISFSLCYVLIAAGVDVQALLQKVGISTDAT 148
           +KK+S+  Q K++  +YG   ++  I +SLIS  + Y+++++GVD+ A+L K+G      
Sbjct: 80  EKKQSKSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVSSGVDMPAILLKLGFKESLV 139

Query: 149 GEKVG----IFALAYAAHKAASPIRFPPTVALTPIVARWIGK 186
             K+      F +AYA HK  +P+R   T+   P++ R+  K
Sbjct: 140 QSKMAAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFRK 181

Homo sapiens (taxid: 9606)

>sp|Q9D8B6|F210B_MOUSE Protein FAM210B OS=Mus musculus GN=Fam210b PE=2 SV=3

 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 6/112 (5%)

Query: 79  RSKEEGNA--EGDKKKSRGDQTKELLAKYGGAYLATSITLSLISFSLCYVLIAAGVDVQA 136
           R+ E G +    +KK SR  Q K++  +YG   ++  I +SL+S  + Y ++++G+D+ A
Sbjct: 66  RTPEPGGSVTGTEKKLSRTQQLKKVFQEYGAVGVSMHIGISLVSLGIFYTVVSSGIDMSA 125

Query: 137 LLQKVGISTDATGEKVG----IFALAYAAHKAASPIRFPPTVALTPIVARWI 184
           +L K+G        K+      F +AYA HK  +P+R   T+   P V R+ 
Sbjct: 126 ILLKLGFKESLVQSKMAAGTSTFVVAYAIHKLFAPVRISITLVSVPFVVRYF 177

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	192
357471623	188	Transmembrane protein C20orf108 [Medicag	0.979	1.0	0.718	2e-62
388522805	188	unknown [Medicago truncatula]	0.979	1.0	0.713	2e-62
363807412	192	uncharacterized protein LOC100820351 [Gl	0.994	0.994	0.704	9e-61
356542780	191	PREDICTED: uncharacterized protein LOC10	0.989	0.994	0.715	2e-60
255565749	194	conserved hypothetical protein [Ricinus	0.984	0.974	0.731	4e-60
388512999	192	unknown [Lotus japonicus]	0.989	0.989	0.695	2e-55
225464842	196	PREDICTED: transmembrane protein C20orf1	0.994	0.974	0.666	1e-53
224104867	204	predicted protein [Populus trichocarpa]	1.0	0.941	0.678	2e-51
449444807	192	PREDICTED: protein FAM210B-like [Cucumis	0.786	0.786	0.782	8e-51
297826037	199	hypothetical protein ARALYDRAFT_901624 [	0.942	0.909	0.657	1e-50

>gi|357471623|ref|XP_003606096.1| Transmembrane protein C20orf108 [Medicago truncatula] gi|355507151|gb|AES88293.1| Transmembrane protein C20orf108 [Medicago truncatula]

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/192 (71%), Positives = 155/192 (80%), Gaps = 4/192 (2%)

Query: 1   MATTLLSHSLLSASILNSNNNCKFCYVGSIQSSKPVWKSCKVRAIKEETEEKTSSSASAS 60
           M T  L  S   AS L++  + +FC + SIQS K   K  +VRA+KE+TEE  SSS  +S
Sbjct: 1   MTTFSLLPSPSCASFLSNKKSSRFCSLASIQSRKSNVKVLRVRAVKEKTEEIKSSSKQSS 60

Query: 61  AEEITKKYGLEAGLWQIFRSKEEGNAEGDKKKSRGDQTKELLAKYGGAYLATSITLSLIS 120
            EE+TKKYGLEAGLW+IF SKEEG    D++KS+GDQ KELLAKYGGAYLATSITLSLIS
Sbjct: 61  PEEVTKKYGLEAGLWKIFSSKEEG----DQQKSKGDQAKELLAKYGGAYLATSITLSLIS 116

Query: 121 FSLCYVLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRFPPTVALTPIV 180
           F+LCYVLI AGVDVQ LLQKVGISTDATGEKVG FALAYAAHKAASPIRFPPTVALTPIV
Sbjct: 117 FALCYVLINAGVDVQTLLQKVGISTDATGEKVGTFALAYAAHKAASPIRFPPTVALTPIV 176

Query: 181 ARWIGKKVENEK 192
           A WIGKK + +K
Sbjct: 177 AGWIGKKADKDK 188

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388522805|gb|AFK49464.1| unknown [Medicago truncatula]

 Score =  243 bits (621), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/192 (71%), Positives = 154/192 (80%), Gaps = 4/192 (2%)

Query: 1   MATTLLSHSLLSASILNSNNNCKFCYVGSIQSSKPVWKSCKVRAIKEETEEKTSSSASAS 60
           M T  L  S   AS L++  + +FC + SIQS K   K  +VRA+KE+TEE  SSS  +S
Sbjct: 1   MTTFSLPPSPSCASFLSNKKSSRFCSLASIQSRKSNVKVLRVRAVKEKTEEIKSSSKQSS 60

Query: 61  AEEITKKYGLEAGLWQIFRSKEEGNAEGDKKKSRGDQTKELLAKYGGAYLATSITLSLIS 120
            EE+TKKYGLEAGLW+IF SKEEG    D++KS+GDQ KELLAKYGGAYLATSITLSLIS
Sbjct: 61  PEEVTKKYGLEAGLWKIFSSKEEG----DQQKSKGDQAKELLAKYGGAYLATSITLSLIS 116

Query: 121 FSLCYVLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRFPPTVALTPIV 180
           F+ CYVLI AGVDVQ LLQKVGISTDATGEKVG FALAYAAHKAASPIRFPPTVALTPIV
Sbjct: 117 FAFCYVLINAGVDVQTLLQKVGISTDATGEKVGTFALAYAAHKAASPIRFPPTVALTPIV 176

Query: 181 ARWIGKKVENEK 192
           A WIGKK + +K
Sbjct: 177 AGWIGKKADKDK 188

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807412|ref|NP_001242383.1| uncharacterized protein LOC100820351 [Glycine max] gi|255647100|gb|ACU24018.1| unknown [Glycine max]

 Score =  238 bits (607), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 136/193 (70%), Positives = 154/193 (79%), Gaps = 2/193 (1%)

Query: 1   MATTLLSHSLLSASILNSNNNCKFCYVGSIQSSKP-VWKSCKVRAIKEETEEKTSSSASA 59
           M T+LL  S   ASIL+   N + C   S  + K  V K  +VRA+KE+TEE  S S  +
Sbjct: 1   MTTSLLLPSPSCASILSKGTN-RICTRASFHTLKSHVKKGFRVRALKEKTEEIESPSQQS 59

Query: 60  SAEEITKKYGLEAGLWQIFRSKEEGNAEGDKKKSRGDQTKELLAKYGGAYLATSITLSLI 119
           S EE+TKKYGLEAGLWQIF SKEEG    ++ KS+GDQ KELLAKYGGAYLATSITLSLI
Sbjct: 60  SPEEVTKKYGLEAGLWQIFSSKEEGKDNSEQPKSKGDQAKELLAKYGGAYLATSITLSLI 119

Query: 120 SFSLCYVLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRFPPTVALTPI 179
           SF+LCY LI+AG+DVQ+LLQKVGISTDATGEKVG FALAYAAHKAASPIRFPPTVALTPI
Sbjct: 120 SFALCYALISAGIDVQSLLQKVGISTDATGEKVGTFALAYAAHKAASPIRFPPTVALTPI 179

Query: 180 VARWIGKKVENEK 192
           +A WIGKKVE +K
Sbjct: 180 LAGWIGKKVEKDK 192

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542780|ref|XP_003539843.1| PREDICTED: uncharacterized protein LOC100811827 [Glycine max]

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/193 (71%), Positives = 155/193 (80%), Gaps = 3/193 (1%)

Query: 1   MATTLLSHSLLSASILNSNNNCKFCYVGSIQSSKP-VWKSCKVRAIKEETEEKTSSSASA 59
           M T+LL  S   A+IL+   N + C   S  S K  V K  +VRA+KE+TEE  S S  +
Sbjct: 1   MTTSLLLPSPSCAAILSKGTN-RICTRASFHSLKSHVKKGFRVRALKEKTEEIESPSQPS 59

Query: 60  SAEEITKKYGLEAGLWQIFRSKEEGNAEGDKKKSRGDQTKELLAKYGGAYLATSITLSLI 119
           S EE+TKKYGLEAGLWQIF SKEEG  +  ++KS+GDQ KELLAKYGGAYLATSITLSLI
Sbjct: 60  SPEEVTKKYGLEAGLWQIFSSKEEGK-DNSQQKSKGDQAKELLAKYGGAYLATSITLSLI 118

Query: 120 SFSLCYVLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRFPPTVALTPI 179
           SF+LCY LI+AG+DVQALLQKVGISTDATGEKVG FALAYAAHKAASPIRFPPTVALTPI
Sbjct: 119 SFALCYALISAGIDVQALLQKVGISTDATGEKVGTFALAYAAHKAASPIRFPPTVALTPI 178

Query: 180 VARWIGKKVENEK 192
           VA WIGKKVE +K
Sbjct: 179 VAGWIGKKVEKDK 191

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565749|ref|XP_002523864.1| conserved hypothetical protein [Ricinus communis] gi|223536952|gb|EEF38590.1| conserved hypothetical protein [Ricinus communis]

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 142/194 (73%), Positives = 160/194 (82%), Gaps = 5/194 (2%)

Query: 1   MATTL-LSHSLLSASILNSNNNCKFCYVGSIQSSKPVWKSCKVRAIKEETEEKTSSSASA 59
           MAT L LS    +AS L++ N CK  Y GS+Q  K  +K+   RAIKE+T+  +SSS+S+
Sbjct: 1   MATPLQLSPPFPAASFLSNKNFCKH-YTGSLQPLKSTFKNFSTRAIKEKTD--SSSSSSS 57

Query: 60  SAEEITKKYGLEAGLWQIFRSKEE-GNAEGDKKKSRGDQTKELLAKYGGAYLATSITLSL 118
           SAE+ITKKYGLEAGLWQIF +KEE    +G+ KKS+GDQ KELLAKYGGAYLATSITLS 
Sbjct: 58  SAEDITKKYGLEAGLWQIFSTKEERKEGDGETKKSKGDQAKELLAKYGGAYLATSITLSF 117

Query: 119 ISFSLCYVLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRFPPTVALTP 178
           ISFSLCY LI AG+DVQALLQKVGISTDATGEKVG FALAYAAHKAASPIRFPPTVALTP
Sbjct: 118 ISFSLCYALINAGIDVQALLQKVGISTDATGEKVGTFALAYAAHKAASPIRFPPTVALTP 177

Query: 179 IVARWIGKKVENEK 192
           IVA WIGKKV+ EK
Sbjct: 178 IVATWIGKKVDKEK 191

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512999|gb|AFK44561.1| unknown [Lotus japonicus]

 Score =  220 bits (561), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/194 (69%), Positives = 152/194 (78%), Gaps = 4/194 (2%)

Query: 1   MATTLLSHSLLSASILNSNNNCKFCYVGSIQSSKPVWKSCKVRAIKEETEE--KTSSSAS 58
           M+T LL  S   AS+L S  +     + SI S KP+ K  +VRA++E+TEE    SS  S
Sbjct: 1   MSTFLLLPSPSCASLL-SKESATVSNLASIHSHKPLVKGFRVRALREKTEEIKSPSSQTS 59

Query: 59  ASAEEITKKYGLEAGLWQIFRSKEEGNAEGDKKKSRGDQTKELLAKYGGAYLATSITLSL 118
           +SAEE+TKKYGLEAGLW+IF SKEE N    +K S+GDQ KELLAKYGGAYLATSITLSL
Sbjct: 60  SSAEEVTKKYGLEAGLWKIFSSKEEENGNSGEK-SKGDQAKELLAKYGGAYLATSITLSL 118

Query: 119 ISFSLCYVLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRFPPTVALTP 178
           ISF+LCY LI AGVDVQ+LLQKVGIS +  GEKVG FALAYAAHKAASPIRFPPTVALTP
Sbjct: 119 ISFTLCYALINAGVDVQSLLQKVGISPNEAGEKVGTFALAYAAHKAASPIRFPPTVALTP 178

Query: 179 IVARWIGKKVENEK 192
           IVA WIGKKVE EK
Sbjct: 179 IVANWIGKKVEKEK 192

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464842|ref|XP_002271410.1| PREDICTED: transmembrane protein C20orf108 [Vitis vinifera] gi|296084861|emb|CBI28270.3| unnamed protein product [Vitis vinifera]

 Score =  214 bits (545), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/195 (66%), Positives = 148/195 (75%), Gaps = 4/195 (2%)

Query: 1   MATTLLSHSLLSASILNSNNNCKFCYVGSIQSSKPVWKSCKVRAIKEETEE----KTSSS 56
           MA  LL     SAS+  +    +     S   SKP +   +VRAIKE+TEE      S S
Sbjct: 1   MAGALLGTCFSSASLSINTREFRIGSSASTPPSKPNFTCFRVRAIKEKTEEIRTPSPSPS 60

Query: 57  ASASAEEITKKYGLEAGLWQIFRSKEEGNAEGDKKKSRGDQTKELLAKYGGAYLATSITL 116
           +S SA+EIT+K+GLEAGLW+IF SK+E    G ++KS+G++ KELLAKYGGAYLATSITL
Sbjct: 61  SSPSAQEITEKFGLEAGLWKIFSSKDEEKEGGKREKSKGEEAKELLAKYGGAYLATSITL 120

Query: 117 SLISFSLCYVLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRFPPTVAL 176
           SLISFSLCY LI AGVDVQALLQKVGIS DATGEKVG FALAYAAHKAASPIRFPPTVAL
Sbjct: 121 SLISFSLCYALINAGVDVQALLQKVGISVDATGEKVGTFALAYAAHKAASPIRFPPTVAL 180

Query: 177 TPIVARWIGKKVENE 191
           TPIVA WIGK V+ E
Sbjct: 181 TPIVASWIGKIVDKE 195

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104867|ref|XP_002313598.1| predicted protein [Populus trichocarpa] gi|222850006|gb|EEE87553.1| predicted protein [Populus trichocarpa]

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/202 (67%), Positives = 155/202 (76%), Gaps = 10/202 (4%)

Query: 1   MATTLLSHSLL---SASILNSNNNCKFCYVGSIQSSKPVWKSCKVRAIKEETEEKTSSSA 57
           MATT L   L    SAS LN+ +   +C    IQ S   +K  + RAIKE+TEE+ + S+
Sbjct: 3   MATTTLQVQLPPFSSASFLNNKSFKNYCCSTYIQPSNSSFKRLQTRAIKEKTEEREAPSS 62

Query: 58  SAS-------AEEITKKYGLEAGLWQIFRSKEEGNAEGDKKKSRGDQTKELLAKYGGAYL 110
           S+S        EE+TKKYGLEAGLW+IF SKEE   EG+K KS+GDQ KELLAKYGGAYL
Sbjct: 63  SSSSSSSSSSVEEVTKKYGLEAGLWKIFSSKEEEKEEGEKTKSKGDQAKELLAKYGGAYL 122

Query: 111 ATSITLSLISFSLCYVLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRF 170
           ATSITLSLISFSLCY LI+AG+DVQA+L KVGISTDA GEKVG FALAYAAHKAASPIRF
Sbjct: 123 ATSITLSLISFSLCYALISAGIDVQAVLLKVGISTDANGEKVGTFALAYAAHKAASPIRF 182

Query: 171 PPTVALTPIVARWIGKKVENEK 192
           PPTVALTPIVA WIGKK + EK
Sbjct: 183 PPTVALTPIVAGWIGKKADKEK 204

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444807|ref|XP_004140165.1| PREDICTED: protein FAM210B-like [Cucumis sativus] gi|449519846|ref|XP_004166945.1| PREDICTED: protein FAM210B-like [Cucumis sativus]

 Score =  205 bits (521), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 122/156 (78%), Positives = 135/156 (86%), Gaps = 5/156 (3%)

Query: 38  KSCKVRAIKEETEE--KTSSSASASAEEITKKYGLEAGLWQIFRSKEEGNAEGDKKKSRG 95
           K  +V+A+K++T E  + S S+S+SA+E+TKKYGLEAGLW+IF SKEEG  EG  K S+G
Sbjct: 39  KPFRVQALKQKTGEIERPSPSSSSSADEVTKKYGLEAGLWKIFSSKEEG--EGTNK-SKG 95

Query: 96  DQTKELLAKYGGAYLATSITLSLISFSLCYVLIAAGVDVQALLQKVGISTDATGEKVGIF 155
           DQ KELLAKYGGAYLATSITLSLISFSLCY LI+AGVDVQ LLQKVGIS D TGEKVG F
Sbjct: 96  DQAKELLAKYGGAYLATSITLSLISFSLCYALISAGVDVQVLLQKVGISIDETGEKVGTF 155

Query: 156 ALAYAAHKAASPIRFPPTVALTPIVARWIGKKVENE 191
           ALAYAAHKAASPIRFPPTVALTPIVA WIGKKVE E
Sbjct: 156 ALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKE 191

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826037|ref|XP_002880901.1| hypothetical protein ARALYDRAFT_901624 [Arabidopsis lyrata subsp. lyrata] gi|297326740|gb|EFH57160.1| hypothetical protein ARALYDRAFT_901624 [Arabidopsis lyrata subsp. lyrata]

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/187 (65%), Positives = 144/187 (77%), Gaps = 6/187 (3%)

Query: 12  SASILNSNNNCKFCYVGSIQSSKPVWKSCKVRAIKEETEEKTSSSASAS----AEEITKK 67
           S+S+LN+ N     +  SI SS   ++   VR   EE E+ TSS +       AEE+TKK
Sbjct: 11  SSSLLNTTNLQIRFFNSSIPSSSKKFRCRAVREKAEEIEKNTSSPSPPPPPPSAEEVTKK 70

Query: 68  YGLEAGLWQIFRSKEEGNAEGD--KKKSRGDQTKELLAKYGGAYLATSITLSLISFSLCY 125
           YGLE GLW+I  SK++  ++G+  KKKS+ D+ KELLAKYGGAYLATSITLSLISFSLCY
Sbjct: 71  YGLEVGLWKILSSKDDEGSDGEDKKKKSKTDEAKELLAKYGGAYLATSITLSLISFSLCY 130

Query: 126 VLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRFPPTVALTPIVARWIG 185
           VL+ +GVDVQALL KVGIST+ TGEKVG FALAYAAHKAASPIRFPPTVALTPIVA WIG
Sbjct: 131 VLVTSGVDVQALLLKVGISTNETGEKVGAFALAYAAHKAASPIRFPPTVALTPIVASWIG 190

Query: 186 KKVENEK 192
           KKV+ EK
Sbjct: 191 KKVDKEK 197

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	192
TAIR|locus:2039610	201	AT2G27290 "AT2G27290" [Arabido	0.651	0.621	0.685	1.1e-41
DICTYBASE|DDB_G0290495	233	DDB_G0290495 [Dictyostelium di	0.515	0.424	0.313	5.5e-09
UNIPROTKB|Q96KR6	192	FAM210B "Protein FAM210B" [Hom	0.510	0.510	0.274	9.7e-09
MGI|MGI:1914267	190	Fam210b "family with sequence	0.520	0.526	0.285	2e-08
ZFIN|ZDB-GENE-050913-122	223	zgc:112435 "zgc:112435" [Danio	0.505	0.434	0.274	2.6e-07
TAIR|locus:2047022	129	AT2G20940 "AT2G20940" [Arabido	0.182	0.271	0.485	9e-06

TAIR|locus:2039610 AT2G27290 "AT2G27290" [Arabidopsis thaliana (taxid:3702)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 87/127 (68%), Positives = 98/127 (77%)

Query:    68 YGLEAGLWQIFRSKEEGNAEGD--KKKSRGDQTKELLAKYGGAYXXXXXXXXXXXXXXCY 125
             YGLE GLW+I  SK++  ++GD  KKKS+ D+ KELLAKYGGAY              CY
Sbjct:    71 YGLEVGLWKILSSKDDEGSDGDNKKKKSKTDEAKELLAKYGGAYLATSITLSLISFSLCY 130

Query:   126 VLIAAGVDVQALLQKVGISTDATGEKVGIFALAYAAHKAASPIRFPPTVALTPIVARWIG 185
             VL+ +GVDVQALL KVGIST+ TGEKVG FALAYAAHKAASPIRFPPTVALTPIVA WIG
Sbjct:   131 VLVTSGVDVQALLLKVGISTNETGEKVGAFALAYAAHKAASPIRFPPTVALTPIVANWIG 190

Query:   186 KKVENEK 192
             KKV+ EK
Sbjct:   191 KKVDKEK 197

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

DICTYBASE|DDB_G0290495 DDB_G0290495 [Dictyostelium discoideum (taxid:44689)]

 Score = 135 (52.6 bits), Expect = 5.5e-09, P = 5.5e-09
 Identities = 32/102 (31%), Positives = 53/102 (51%)

Query:    90 KKKSRGDQTKELLAKYGGAYXXXXXXXXXXXXXXCYVLIAAGVDVQALLQKVGISTDATG 149
             KK S G++ K + +KYG                  YVL ++GVD+   L  + I  +A  
Sbjct:   132 KKLSTGEKIKYMFSKYGKLALIVHFGIYFATMGSFYVLFSSGVDINNALDFLHIPRNAVN 191

Query:   150 EKVGIFALAYAAHKAASPIRFPPTVALTPIVARWI---GKKV 188
               +G FA+A+A  K ++ +R P T+   P++AR++   GKK+
Sbjct:   192 PSLGAFAVAFACTKISTVVRTPLTLITVPLLARYLSRAGKKL 233

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|Q96KR6 FAM210B "Protein FAM210B" [Homo sapiens (taxid:9606)]

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 28/102 (27%), Positives = 50/102 (49%)

Query:    89 DKKKSRGDQTKELLAKYGGAYXXXXXXXXXXXXXXCYVLIAAGVDVQALLQKVGISTDAT 148
             +KK+S+  Q K++  +YG                  Y+++++GVD+ A+L K+G      
Sbjct:    80 EKKQSKSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVSSGVDMPAILLKLGFKESLV 139

Query:   149 GEKVGI----FALAYAAHKAASPIRFPPTVALTPIVARWIGK 186
               K+      F +AYA HK  +P+R   T+   P++ R+  K
Sbjct:   140 QSKMAAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFRK 181

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1914267 Fam210b "family with sequence similarity 210, member B" [Mus musculus (taxid:10090)]

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 30/105 (28%), Positives = 49/105 (46%)

Query:    84 GNAEGDKKK-SRGDQTKELLAKYGGAYXXXXXXXXXXXXXXCYVLIAAGVDVQALLQKVG 142
             G+  G +KK SR  Q K++  +YG                  Y ++++G+D+ A+L K+G
Sbjct:    72 GSVTGTEKKLSRTQQLKKVFQEYGAVGVSMHIGISLVSLGIFYTVVSSGIDMSAILLKLG 131

Query:   143 ISTDATGEKVGI----FALAYAAHKAASPIRFPPTVALTPIVARW 183
                     K+      F +AYA HK  +P+R   T+   P V R+
Sbjct:   132 FKESLVQSKMAAGTSTFVVAYAIHKLFAPVRISITLVSVPFVVRY 176

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-050913-122 zgc:112435 "zgc:112435" [Danio rerio (taxid:7955)]

 Score = 120 (47.3 bits), Expect = 2.6e-07, P = 2.6e-07
 Identities = 28/102 (27%), Positives = 50/102 (49%)

Query:    86 AEGDK-KKSRGDQTKELLAKYGGAYXXXXXXXXXXXXXXCYVLIAAGVDVQALLQKVGIS 144
             A+G + K S+  Q +++  +YG                  Y+ +++G+DV +LL K+G S
Sbjct:   107 ADGSELKASKVQQLRQVFQQYGAVGVSFHICISLISLGIFYLAVSSGLDVASLLCKLGFS 166

Query:   145 TDATGEKVG----IFALAYAAHKAASPIRFPPTVALTPIVAR 182
                   ++     +F LAYA HK  +P+R   T+   P++ R
Sbjct:   167 EAVVQSRLAAGTSVFVLAYAVHKLFAPLRISITLVCVPLIVR 208

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2047022 AT2G20940 "AT2G20940" [Arabidopsis thaliana (taxid:3702)]

 Score = 80 (33.2 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
 Identities = 17/35 (48%), Positives = 24/35 (68%)

Query:   153 GIFALAYAAHKAASPIRFPPTVALTPIVARWIGKK 187
             G  ALA   +KA  PIR P T+ALTP +AR++ ++
Sbjct:    88 GALALAVLCNKALFPIRVPITMALTPPIARFLRQR 122

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0006457 "protein folding" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00037280001 SubName- Full=Chromosome undetermined scaffold_87, whole genome shotgun sequence; (196 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	192
pfam06916	88	pfam06916, DUF1279, Protein of unknown function (D	2e-28

>gnl|CDD|191640 pfam06916, DUF1279, Protein of unknown function (DUF1279)

 Score =  101 bits (253), Expect = 2e-28
 Identities = 40/88 (45%), Positives = 58/88 (65%), Gaps = 4/88 (4%)

Query: 96  DQTKELLAKYGGAYLATSITLSLISFSLCYVLIAAGVDVQALLQKVGISTDATGEKV--- 152
            + K+L  KYG   L    ++SL SF + Y+L+++GVDV +LL+K+GIS     +     
Sbjct: 1   QRFKKLFKKYGYVALGVHFSISLASFGIFYLLVSSGVDVISLLEKLGISDSVVEKLSASS 60

Query: 153 -GIFALAYAAHKAASPIRFPPTVALTPI 179
            G FA+AYA HK A+PIR+P T+ALTP+
Sbjct: 61  WGTFAIAYAIHKIATPIRYPITLALTPL 88

This family represents the C-terminus (approx. 120 residues) of a number of eukaryotic proteins of unknown function. Length = 88

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	192
PF06916	91	DUF1279: Protein of unknown function (DUF1279); In	99.96
KOG4526	170	consensus Predicted membrane protein [Function unk	99.93
KOG4082	268	consensus Uncharacterized conserved protein [Funct	99.77
KOG4526	170	consensus Predicted membrane protein [Function unk	90.81

>PF06916 DUF1279: Protein of unknown function (DUF1279); InterPro: IPR009688 This entry represents the C terminus (approx

Probab=99.96  E-value=1.9e-29  Score=188.67  Aligned_cols=84  Identities=45%  Similarity=0.758  Sum_probs=79.1

Q ss_pred             HHHHHHHHHhcchhhhhhhhhhhhhhhhhHHHHHcCCCHHHHHHHhCCC---CCC----cCcchhHHHHHHHHHhhcccc
Q 029500           96 DQTKELLAKYGGAYLATSITLSLISFSLCYVLIAAGVDVQALLQKVGIS---TDA----TGEKVGIFALAYAAHKAASPI  168 (192)
Q Consensus        96 qRlK~L~KkYG~vaL~vyi~lS~isf~~~Y~aV~sGVDV~~lL~~vGi~---~~~----~~e~~gtfalAYaihK~l~Pv  168 (192)
                      ||+|+|+|+||+++|+||+++|++||++||++|++|+|+.++++++|++   ++.    .++.+|+|++||++||+++|+
T Consensus         1 qr~K~l~k~YG~~~l~vy~~~s~~~~~~~y~~v~~GvDv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lAy~~~K~~~Pv   80 (91)
T PF06916_consen    1 QRLKQLFKKYGYVALGVYLGLSFISLGSCYLAVSSGVDVIALLESLGISVGWESKVEKKKNSSAGTFALAYAIHKLLEPV   80 (91)
T ss_pred             CcHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhhhhhhcccccHHHHHHHHHHHhhhhhh
Confidence            7999999999999999999999999999999999999999999999999   443    256799999999999999999


Q ss_pred             cccceeeecHH
Q 029500          169 RFPPTVALTPI  179 (192)
Q Consensus       169 R~plTlaiTP~  179 (192)
                      |+++|+++||.
T Consensus        81 R~~lT~~~TP~   91 (91)
T PF06916_consen   81 RLPLTLAITPY   91 (91)
T ss_pred             eeeeeeeecCC
Confidence            99999999994

120 residues) of a number of eukaryotic proteins of unknown function.

>KOG4526 consensus Predicted membrane protein [Function unknown]

Probab=99.93  E-value=1.7e-26  Score=191.40  Aligned_cols=153  Identities=31%  Similarity=0.351  Sum_probs=127.2

Q ss_pred             cccccchhhhhhhhhhhccCCCccccHHHHhhhhcccccchhhcccccCCCCCC----CCCCChhHHHHHHHHHhcchhh
Q 029500           35 PVWKSCKVRAIKEETEEKTSSSASASAEEITKKYGLEAGLWQIFRSKEEGNAEG----DKKKSRGDQTKELLAKYGGAYL  110 (192)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~gl~a~~~~~~~sk~~~~~~~----~~k~S~~qRlK~L~KkYG~vaL  110 (192)
                      +..+.+|||+..+..+.+.-.+..+   ...+++|.+-+.|..-+.++..+..+    +++.++.+.+|..+++||.+++
T Consensus         5 ~~~~~~~c~~~~~~~~~~~~~~~p~---s~~~~~g~~~~~~~~~~~t~~~G~~~~~~k~~k~sk~~~ik~~~~~y~~~~V   81 (170)
T KOG4526|consen    5 RRDKSARCRAARKPLLLLAGASVPP---SQSSKMGTCLSSSNPSYGTETTGVKGSVTKYGKSSKVVYIKFYFADYGAVFV   81 (170)
T ss_pred             cccccccCccccCCCCCcccCcCCc---ccCcccCCCcccCCCcccccccccchhhhhhcchhHHHHHHHHHHHcCCceE
Confidence            3456789999988887762211111   11233999999999888777654322    4578899999999999999999


Q ss_pred             hhhhhhhhhhhhhhHHHHHcCCCHHHHHHHhCCCCCCcC----cchhHHHHHHHHHhhcccccccceeeecHHHHHHHhc
Q 029500          111 ATSITLSLISFSLCYVLIAAGVDVQALLQKVGISTDATG----EKVGIFALAYAAHKAASPIRFPPTVALTPIVARWIGK  186 (192)
Q Consensus       111 ~vyi~lS~isf~~~Y~aV~sGVDV~~lL~~vGi~~~~~~----e~~gtfalAYaihK~l~PvR~plTlaiTP~IaR~Lrr  186 (192)
                      .+|+.+|.+++++||+++.+|+|+..++.+.|+++..+.    ..+++|++||+|||+|.|||+|+|+++||.+|||||+
T Consensus        82 ~~~~~~s~is~~~~y~vv~sgvd~~~~l~~~g~~e~~~e~k~ssg~s~la~AyaiHKal~pvRvpiT~altP~iar~lr~  161 (170)
T KOG4526|consen   82 EVHTLGSEISLGLFYAVVNSGVDLVAVLLKSGFSENKVEQKASSGGSELALAYAIHKALAPVRVPITAALTPPIARYLRK  161 (170)
T ss_pred             EEeehhhheeheeeeeecccccchHHHHhhhccccchHHHHhhhhhhHHHHHHHHHhhhceeeecceeeccHHHHHHHHh
Confidence            999999999999999999999999999999999988643    2457999999999999999999999999999999999


Q ss_pred             cCcc
Q 029500          187 KVEN  190 (192)
Q Consensus       187 ~~~~  190 (192)
                      .+-.
T Consensus       162 ~~i~  165 (170)
T KOG4526|consen  162 KGIL  165 (170)
T ss_pred             cccc
Confidence            9854

>KOG4082 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.77  E-value=9.9e-20  Score=156.11  Aligned_cols=100  Identities=22%  Similarity=0.259  Sum_probs=94.7

Q ss_pred             CCCChhHHHHHHHHHhcchhhhhhhhhhhhhhhhhHHHHHcCCCHHHHHHHhCCCCCC------cCcchhHHHHHHHHHh
Q 029500           90 KKKSRGDQTKELLAKYGGAYLATSITLSLISFSLCYVLIAAGVDVQALLQKVGISTDA------TGEKVGIFALAYAAHK  163 (192)
Q Consensus        90 ~k~S~~qRlK~L~KkYG~vaL~vyi~lS~isf~~~Y~aV~sGVDV~~lL~~vGi~~~~------~~e~~gtfalAYaihK  163 (192)
                      .++.+++++|.|+|+||+++|++|...+..||+.+|+++++||||.++|+++++++..      ..|.+|..++||++||
T Consensus       104 A~k~LFAK~K~~fKqYWYiaiPaHaasctaWF~afYllsKSGVDViaLLewiHlpdaIiEKVk~spedaG~vaiali~YK  183 (268)
T KOG4082|consen  104 ANKGLFAKFKHMFKQYWYIAIPAHAASCTAWFGAFYLLSKSGVDVIALLEWIHLPDAIIEKVKGSPEDAGHVAIALICYK  183 (268)
T ss_pred             cchhHHHHHHHHHHhheeeeehHHHHHHHHHHHHhheeeccCCcHHHHHHHHcCcHHHHHHhcCCccccchhhHHHHHHH
Confidence            3688999999999999999999999999999999999999999999999999999865      3568999999999999


Q ss_pred             hcccccccceeeecHHHHHHHhccCc
Q 029500          164 AASPIRFPPTVALTPIVARWIGKKVE  189 (192)
Q Consensus       164 ~l~PvR~plTlaiTP~IaR~Lrr~~~  189 (192)
                      +.+|+|+.+|+.++....++||+.|.
T Consensus       184 iAmPfRY~~TL~~iqasf~tLrq~Gk  209 (268)
T KOG4082|consen  184 IAMPFRYALTLGCIQASFKTLRQHGK  209 (268)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999884

>KOG4526 consensus Predicted membrane protein [Function unknown]

Probab=90.81  E-value=0.067  Score=45.27  Aligned_cols=46  Identities=13%  Similarity=0.140  Sum_probs=41.0

Q ss_pred             CCCChhHHHHHHHHHhcchhhhhhhhhhhhhhhhhHHHHHcCCCHH
Q 029500           90 KKKSRGDQTKELLAKYGGAYLATSITLSLISFSLCYVLIAAGVDVQ  135 (192)
Q Consensus        90 ~k~S~~qRlK~L~KkYG~vaL~vyi~lS~isf~~~Y~aV~sGVDV~  135 (192)
                      ...+..++.|.++++||+..+++|+..++.+++.||+.++.+....
T Consensus        45 ~~~t~~~G~~~~~~k~~k~sk~~~ik~~~~~y~~~~V~~~~~~s~i   90 (170)
T KOG4526|consen   45 SYGTETTGVKGSVTKYGKSSKVVYIKFYFADYGAVFVEVHTLGSEI   90 (170)
T ss_pred             cccccccccchhhhhhcchhHHHHHHHHHHHcCCceEEEeehhhhe
Confidence            4567789999999999999999999999999999999999866443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00