Citrus Sinensis ID: 029515

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190--
Protein Sequence
MLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKKK
Secondary Structure (PSIPRED)
cEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHEEEEEEEEEcccccccHHHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHccccccccHHHHHHHHHHHHHccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHcc
Secondary Structure Prediction (SSPRO)
cEHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccHccccHHHHEHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcHHHHccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHccc
Coil and Loop (DISEMBL)
MLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAvgilpsgvwlpfmqwcgRTLFFLVTACEivqvqdhpsLFITFLAWCLIEVIrypfyalntigacphwltylrytmfiplypigVLGEMLllnqafpymkeknifanffaglpfsyyNVVQVVFVMYPFAWIKLYSHMLKQRGsklgkrqekkkk
Flexible Loop (DISEMBL)
MLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQrgsklgkrqekkkk
Low Complexity Region (SEG)
MLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKKK
Disordered region (IsUnstruct)
*********KSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHML****************
Disordered Region (DISOPRED)
MLLSNL*STKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHML****************
Disordered Region (DISEMBL)
MLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLK***************
Disordered Region (DISPRO)
MLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLG********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	192	2.2.26 [Sep-21-2011]
Q2KIP8	254	Very-long-chain (3R)-3-hy	yes	no	0.843	0.637	0.339	1e-23
Q5RBK3	255	Very-long-chain (3R)-3-hy	yes	no	0.843	0.635	0.339	3e-23
Q6Y1H2	254	Very-long-chain (3R)-3-hy	yes	no	0.843	0.637	0.339	3e-23
Q9D3B1	254	Very-long-chain (3R)-3-hy	yes	no	0.843	0.637	0.333	8e-23
Q9QY80	281	Very-long-chain (3R)-3-hy	no	no	0.859	0.587	0.329	2e-21
Q7SY06	359	Very-long-chain (3R)-3-hy	no	no	0.901	0.481	0.323	6e-21
Q4W1W1	249	Very-long-chain (3R)-3-hy	no	no	0.859	0.662	0.323	1e-20
Q9N1R5	288	Very-long-chain (3R)-3-hy	N/A	no	0.859	0.572	0.323	1e-20
Q8K2C9	362	Very-long-chain (3R)-3-hy	no	no	0.942	0.5	0.310	2e-20
B0YJ81	288	Very-long-chain (3R)-3-hy	no	no	0.864	0.576	0.313	1e-19

>sp|Q2KIP8|HACD2_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2 OS=Bos taurus GN=PTPLB PE=2 SV=2

 Score =  108 bits (271), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 94/171 (54%), Gaps = 9/171 (5%)

Query: 27  QTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLI 86
           QT A LE++H A+GI+PS V L  +Q   R          + +VQ   S+ +  +AW + 
Sbjct: 85  QTGALLEILHCAIGIVPSSVVLTSIQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTIT 144

Query: 87  EVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFF 146
           E+IRY FY  + +   P+ + + RYT+FI LYP+GV GE+L +  A P++++  +++   
Sbjct: 145 EIIRYSFYTFSLLNHLPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYS--- 201

Query: 147 AGLP------FSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKK 191
             LP      F YY  + ++ + Y   + +LY HM+ QR   L   +E KK
Sbjct: 202 ISLPNKYNFSFDYYAFLILIMISYIPLFPQLYFHMIHQRRKILSHTEEHKK 252

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.
Bos taurus (taxid: 9913)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: -

>sp|Q5RBK3|HACD2_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2 OS=Pongo abelii GN=PTPLB PE=2 SV=1

 Score =  108 bits (269), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 9/171 (5%)

Query: 27  QTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLI 86
           QT A LE++H A+GI+PS V L   Q   R          + +VQ   S+ +  +AW + 
Sbjct: 86  QTGALLEILHCAIGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTIT 145

Query: 87  EVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFF 146
           E+IRY FY  + +   P+ + + RYT+FI LYP+GV GE+L +  A P++++  +++   
Sbjct: 146 EIIRYSFYTFSLLNHLPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYS--- 202

Query: 147 AGLP------FSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKK 191
             LP      F YY  + ++ + Y   + +LY HM+ QR   L   +E KK
Sbjct: 203 ISLPNKYNFSFDYYAFLILIMISYIPIFPQLYFHMIHQRRKILSHTEEHKK 253

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Pongo abelii (taxid: 9601)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q6Y1H2|HACD2_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2 OS=Homo sapiens GN=PTPLB PE=1 SV=1

 Score =  108 bits (269), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 9/171 (5%)

Query: 27  QTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLI 86
           QT A LE++H A+GI+PS V L   Q   R          + +VQ   S+ +  +AW + 
Sbjct: 85  QTGALLEILHCAIGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTIT 144

Query: 87  EVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFF 146
           E+IRY FY  + +   P+ + + RYT+FI LYP+GV GE+L +  A P++++  +++   
Sbjct: 145 EIIRYSFYTFSLLNHLPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYS--- 201

Query: 147 AGLP------FSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKK 191
             LP      F YY  + ++ + Y   + +LY HM+ QR   L   +E KK
Sbjct: 202 ISLPNKYNFSFDYYAFLILIMISYIPIFPQLYFHMIHQRRKILSHTEEHKK 252

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q9D3B1|HACD2_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2 OS=Mus musculus GN=Ptplb PE=2 SV=1

 Score =  106 bits (265), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 9/171 (5%)

Query: 27  QTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLI 86
           QT A LE++H A+GI+PS V L   Q   R          + +VQ   S+ +  +AW + 
Sbjct: 85  QTGALLEILHCAIGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTIT 144

Query: 87  EVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFF 146
           E+IRY FY  + +   P+ + + RYT+FI LYP+GV GE+L +  A P++++  +++   
Sbjct: 145 EIIRYSFYTFSLLNHLPYIIKWARYTLFIVLYPMGVTGELLTIYAALPFVRQAGLYS--- 201

Query: 147 AGLP------FSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKK 191
             LP      F Y+  + ++ + Y   + +LY HM+ QR   L   +E KK
Sbjct: 202 ISLPNKYNFSFDYHAFLILIMISYIPLFPQLYFHMIHQRRKVLSHTEEHKK 252

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q9QY80|HACD1_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1 OS=Mus musculus GN=Ptpla PE=2 SV=1

 Score =  102 bits (253), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 5/170 (2%)

Query: 14  GTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDH 73
           G + S  + +   QT A LEVVH  +GI+P+ V +  +Q   R     +    I  +Q+ 
Sbjct: 99  GLYKSIQKTLKFFQTFALLEVVHCLIGIVPTSVLVTGVQVSSRIFMVWLITHSIKPIQNE 158

Query: 74  PSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAF 133
            S+ +  ++W + E+ RY FY  + +   PH++ + RY +FI LYP+GV GE+L +  A 
Sbjct: 159 ESVVLFLVSWTVTEITRYSFYTFSLLDHLPHFIKWARYNLFIILYPVGVAGELLTIYAAL 218

Query: 134 PYMKEKNIFA----NFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQR 179
           PY+K+  +F+    N +  + F YY  + +    Y   + +LY HML+QR
Sbjct: 219 PYVKKSGMFSVRLPNKY-NVSFDYYYFLLITMASYIPLFPQLYFHMLRQR 267

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q7SY06|HADC_DANRE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase OS=Danio rerio GN=ptplad1 PE=2 SV=2

 Score =  100 bits (249), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 3/176 (1%)

Query: 6   LLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTAC 65
           +L   S   TF +  ++++  Q  A +EV++ AVG++ +GV   F+Q  GR     V   
Sbjct: 171 ILGQDSFYDTFHTIADVMYFCQMLAIMEVINPAVGLVKTGVMPAFIQVMGRNFILFVIFG 230

Query: 66  EIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGE 125
            +  +Q+ P +F  F  W  IE+ RYPFY L  I      LT+LRYT+++PLYP+GVL E
Sbjct: 231 SLEDMQNKPVVFFVFYLWSTIEIFRYPFYMLACIDTEWKLLTWLRYTIWMPLYPLGVLAE 290

Query: 126 MLLLNQAFPYMKEKNIFANFF---AGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQ 178
            + + Q+ P   E  + +       GL  S+  ++Q+  V+        + H+ KQ
Sbjct: 291 AVAVIQSIPIFDETKLLSIPLPKATGLSLSFSYILQLYLVVMFLGLFINFRHLFKQ 346

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis. Involved in Rac1-signaling pathways leading to the modulation of gene expression.

Danio rerio (taxid: 7955)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q4W1W1|HACD1_CANFA Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1 OS=Canis familiaris GN=PTPLA PE=2 SV=1

 Score = 99.8 bits (247), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 93/170 (54%), Gaps = 5/170 (2%)

Query: 14  GTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDH 73
           G + S  + +   QT A LE+VH  +GI+P+ V +  +Q   R     +    I  +Q+ 
Sbjct: 67  GLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSVIVAGVQVSSRIFMVWLITHSIKPIQNE 126

Query: 74  PSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAF 133
            S+ +  +AW + E+ RY FY  + +   P+++ + RY  FI LYP+GV+GE+L +  A 
Sbjct: 127 ESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWARYNFFIILYPVGVVGELLTIYAAL 186

Query: 134 PYMKEKNIFA----NFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQR 179
           PY+K+  +F+    N +  + F YY  + +    Y   + +LY HML+QR
Sbjct: 187 PYVKKTGMFSIRLPNKY-NVSFDYYYFLLITMASYIPLFPQLYFHMLRQR 235

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Canis familiaris (taxid: 9615)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q9N1R5|HACD1_SHEEP Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1 OS=Ovis aries GN=PTPLA PE=2 SV=1

 Score = 99.4 bits (246), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 92/170 (54%), Gaps = 5/170 (2%)

Query: 14  GTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDH 73
           G + S  + +   QT A LE+VH  +GI+P+ V +  +Q   R     +    I  +Q+ 
Sbjct: 106 GLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSVLVAGVQVSSRIFMVWLVTHSIKPIQNE 165

Query: 74  PSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAF 133
            S+ +  +AW + E+ RY FY  + +   P+++ + RY  FI LYP+GV GE+L +  A 
Sbjct: 166 ESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWARYNFFIILYPVGVAGELLTIYAAL 225

Query: 134 PYMKEKNIFA----NFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQR 179
           PY+K+  +F+    N +  + F YY  + +    Y   + +LY HML+QR
Sbjct: 226 PYVKKTGMFSIRLPNKY-NVSFDYYYFLLITMASYIPLFPQLYFHMLRQR 274

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Ovis aries (taxid: 9940)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q8K2C9|HACD3_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 3 OS=Mus musculus GN=ptplad1 PE=1 SV=2

 Score = 99.0 bits (245), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 9/190 (4%)

Query: 6   LLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTAC 65
           +L  +S   TF +  ++++  Q  A +E ++ A+G+  + V    +Q+ GR     +   
Sbjct: 174 ILGKESFYDTFHNVADMMYFCQMLALVETLNAAIGVTSTPVLPALIQFLGRNFILFLVFG 233

Query: 66  EIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGE 125
            + ++Q+   +F  F +W  IE+ RYPFY L+ I      LT+LRYTM+IPLYP+G L E
Sbjct: 234 TMEEMQNKAVVFFVFYSWSAIEIFRYPFYMLSCIDMDWKVLTWLRYTMWIPLYPLGCLSE 293

Query: 126 MLLLNQAFPYMKEKNIFANFFAGLP------FSYYNVVQVVFVMYPFAWIKLYSHMLKQR 179
            + + Q+ P   E   F+ F    P      FS++  +QV  VM        + H+ KQR
Sbjct: 294 AVAVIQSIPVFNESGRFS-FTLPYPVKMKVRFSFF--LQVYLVMLFLGLYINFRHLYKQR 350

Query: 180 GSKLGKRQEK 189
             + G++++K
Sbjct: 351 RRRYGQKKKK 360

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis. Involved in Rac1-signaling pathways leading to the modulation of gene expression.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|B0YJ81|HACD1_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1 OS=Homo sapiens GN=PTPLA PE=1 SV=1

 Score = 96.3 bits (238), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 90/169 (53%), Gaps = 3/169 (1%)

Query: 14  GTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDH 73
           G + S  + +   QT A LE+VH  +GI+P+ V +  +Q   R     +    I  +Q+ 
Sbjct: 106 GLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSVIVTGVQVSSRIFMVWLITHSIKPIQNE 165

Query: 74  PSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAF 133
            S+ +  +AW + E+ RY FY  + +   P+++ + RY  FI LYP+GV GE+L +  A 
Sbjct: 166 ESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWARYNFFIILYPVGVAGELLTIYAAL 225

Query: 134 PYMKEKNIFANFFA---GLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQR 179
           P++K+  +F+        + F YY  + +    Y   + +LY HML+QR
Sbjct: 226 PHVKKTGMFSIRLPNKYNVSFDYYYFLLITMASYIPLFPQLYFHMLRQR 274

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	192
224054853	219	predicted protein [Populus trichocarpa]	0.994	0.872	0.583	2e-61
357472425	290	Protein-tyrosine phosphatase-like member	0.989	0.655	0.581	1e-58
388506134	219	unknown [Medicago truncatula]	0.989	0.867	0.581	3e-58
351725325	218	uncharacterized protein LOC100527607 [Gl	0.989	0.871	0.581	3e-57
388495836	219	unknown [Lotus japonicus]	0.973	0.853	0.553	3e-55
297796925	221	hypothetical protein ARALYDRAFT_358193 [	0.994	0.864	0.515	7e-53
79541365	272	Protein-tyrosine phosphatase-like, PTPLA	0.932	0.658	0.541	3e-52
225435072	208	PREDICTED: 3-hydroxyacyl-CoA dehydratase	0.942	0.870	0.552	4e-52
255580590	217	ptpla domain protein, putative [Ricinus	0.921	0.815	0.569	5e-52
26453242	221	unknown protein [Arabidopsis thaliana] g	0.932	0.809	0.541	6e-52

>gi|224054853|ref|XP_002298376.1| predicted protein [Populus trichocarpa] gi|222845634|gb|EEE83181.1| predicted protein [Populus trichocarpa]

 Score =  240 bits (612), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 112/192 (58%), Positives = 149/192 (77%), Gaps = 1/192 (0%)

Query: 2   LLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFL 61
           +L N  ST S+ G +ASAG++I +LQT +FLEV+HGA+G++PSGV  PFMQW GRT F L
Sbjct: 27  ILINFFSTHSLNGAYASAGDLICLLQTVSFLEVIHGALGVVPSGVLFPFMQWGGRTHFVL 86

Query: 62  VTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIG 121
               +I++VQ+ PS+FITF+AW + EVIRY  YALN +G+CP W+TYLRYT FI LYPIG
Sbjct: 87  AIVRQIIEVQELPSVFITFVAWSMAEVIRYSHYALNCVGSCPSWITYLRYTAFIVLYPIG 146

Query: 122 VL-GEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRG 180
           +  GEM  + QA P++K+KN++A+FFA  PFSYY+ ++VV + YPF W+ LY ++LKQR 
Sbjct: 147 LAPGEMWTMYQALPFVKKKNLYADFFAAFPFSYYDFLRVVLLCYPFLWLNLYRYLLKQRR 206

Query: 181 SKLGKRQEKKKK 192
           SKLG+ QE KKK
Sbjct: 207 SKLGRHQETKKK 218

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357472425|ref|XP_003606497.1| Protein-tyrosine phosphatase-like member B [Medicago truncatula] gi|355507552|gb|AES88694.1| Protein-tyrosine phosphatase-like member B [Medicago truncatula]

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 111/191 (58%), Positives = 144/191 (75%), Gaps = 1/191 (0%)

Query: 2   LLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFL 61
           +L NLLST SI GT+ASAG +I  LQ AAFLEV+HGA+G++PSG  LP MQW GRT F L
Sbjct: 28  ILYNLLSTSSITGTYASAGTLISFLQCAAFLEVIHGAIGLVPSGALLPLMQWGGRTHFVL 87

Query: 62  VTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIG 121
                I +VQ+ P +FITFLAW + E+IRY  YA + +G CP W+TY+RYT FI +YP+G
Sbjct: 88  AIVNGIHEVQELPPVFITFLAWSIGEIIRYSHYAFSCLGNCPSWITYIRYTAFIVIYPVG 147

Query: 122 VL-GEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRG 180
           V  GE+ L+ Q+ P +KEKNI+A+ F+ LPFSYY+ ++VV V+YPF W KLY H+ KQR 
Sbjct: 148 VFPGELWLMYQSLPIIKEKNIYADSFSSLPFSYYDFLKVVIVVYPFLWFKLYLHLFKQRR 207

Query: 181 SKLGKRQEKKK 191
           SKL KR++KK+
Sbjct: 208 SKLYKRRDKKR 218

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506134|gb|AFK41133.1| unknown [Medicago truncatula]

 Score =  229 bits (585), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 111/191 (58%), Positives = 144/191 (75%), Gaps = 1/191 (0%)

Query: 2   LLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFL 61
           +L NLLST SI GT+ASAG +I  LQ AAFLEV+HGA+G++PSG  LP MQW GRT F L
Sbjct: 28  ILYNLLSTSSITGTYASAGTLISFLQCAAFLEVIHGAIGLVPSGALLPLMQWGGRTHFVL 87

Query: 62  VTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIG 121
                I +VQ+ P +FITFLAW + E+IRY  YA + +G CP W+TY+RYT FI +YP+G
Sbjct: 88  AIVNGIHEVQELPPVFITFLAWSIGEIIRYSHYAFSCLGNCPSWITYIRYTAFIVIYPVG 147

Query: 122 VL-GEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRG 180
           V  GE+ L+ Q+ P +KEKNI+A+ F+ LPFSYY+ ++VV V+YPF W KLY H+ KQR 
Sbjct: 148 VFPGELWLMYQSLPIIKEKNIYADSFSSLPFSYYDFLKVVIVVYPFLWFKLYLHLFKQRR 207

Query: 181 SKLGKRQEKKK 191
           SKL KR++KK+
Sbjct: 208 SKLYKRRDKKR 218

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725325|ref|NP_001238624.1| uncharacterized protein LOC100527607 [Glycine max] gi|255632745|gb|ACU16724.1| unknown [Glycine max]

 Score =  226 bits (576), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 111/191 (58%), Positives = 141/191 (73%), Gaps = 1/191 (0%)

Query: 2   LLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFL 61
           +L NLL T SI GT+ASA  +I  LQ AAFLEV+HGA+GI+PSGV LP MQW GRT F L
Sbjct: 27  ILYNLLVTASIKGTYASAASLICFLQCAAFLEVIHGAIGIVPSGVLLPLMQWGGRTHFVL 86

Query: 62  VTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIG 121
               ++ ++Q+ PS+FITFLAW + EVIRY  YA   +G CP W+TYLRYT FI LYP+G
Sbjct: 87  AIVRKLDELQELPSVFITFLAWSMGEVIRYSHYAFGCLGNCPSWMTYLRYTAFIVLYPLG 146

Query: 122 V-LGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRG 180
           V  GE+  + QA P +KEKN++A+ F+ LPFSYY+ ++VV + YPF W KLY HM KQR 
Sbjct: 147 VGPGEIWAMYQALPVIKEKNLYADSFSSLPFSYYDFLKVVLIAYPFLWFKLYLHMFKQRR 206

Query: 181 SKLGKRQEKKK 191
           +KL KR +KK+
Sbjct: 207 TKLYKRHDKKR 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388495836|gb|AFK35984.1| unknown [Lotus japonicus]

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 104/188 (55%), Positives = 142/188 (75%), Gaps = 1/188 (0%)

Query: 5   NLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTA 64
           NL+ST SI GT+ASAG++I  LQ AAFLEV+HGA+G++PSGV LP MQW GRT F L   
Sbjct: 32  NLVSTASINGTYASAGQLIIFLQCAAFLEVIHGAIGLVPSGVLLPLMQWGGRTHFVLALV 91

Query: 65  CEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGV-L 123
            ++ +VQ+  S+FITFLAW + EVIRY  YA + +G CP W+TYLRY  F  LYP+GV  
Sbjct: 92  AKLDEVQELTSIFITFLAWSISEVIRYSHYAFSCLGNCPSWITYLRYAAFTVLYPLGVGP 151

Query: 124 GEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKL 183
           GE+  + QA P +K+KN++A+ F+ LPFSYY+ ++VV ++YPF W+KLY H+ KQR +KL
Sbjct: 152 GEIWAMYQALPIIKKKNLYADSFSSLPFSYYDFLRVVLIVYPFLWLKLYLHLFKQRRAKL 211

Query: 184 GKRQEKKK 191
            ++ +KK+
Sbjct: 212 YRQHDKKR 219

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796925|ref|XP_002866347.1| hypothetical protein ARALYDRAFT_358193 [Arabidopsis lyrata subsp. lyrata] gi|297312182|gb|EFH42606.1| hypothetical protein ARALYDRAFT_358193 [Arabidopsis lyrata subsp. lyrata]

 Score =  212 bits (539), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 100/194 (51%), Positives = 140/194 (72%), Gaps = 3/194 (1%)

Query: 2   LLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFL 61
           +L++ LS K+I   +ASAG +I + QT A LEV+HGA+GI+PSG   P MQW GRT F L
Sbjct: 27  ILNSFLSNKTINVAYASAGYLISVFQTVAVLEVLHGAIGIVPSGFLSPLMQWSGRTHFIL 86

Query: 62  VTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIG 121
               +I +VQD P L +T +AWC+ E+IRYP YA   +G+CP+WLTYLRYT FI +YP G
Sbjct: 87  AIVGQIKEVQDSPWLSLTLVAWCIGEMIRYPHYAFTCLGSCPYWLTYLRYTGFIIIYPTG 146

Query: 122 VLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRGS 181
           ++GE+L++ +A PY+KE N++  FF+  PFSYY+ +  V ++YPF W+KLY  + KQR S
Sbjct: 147 LVGELLIMYKALPYVKETNLYVKFFSVFPFSYYDFLWDVLLVYPFLWLKLYLQLFKQRKS 206

Query: 182 KLGKRQE---KKKK 192
           KLGK ++   K+K+
Sbjct: 207 KLGKSEKLHGKRKR 220

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79541365|ref|NP_200785.2| Protein-tyrosine phosphatase-like, PTPLA [Arabidopsis thaliana] gi|332009847|gb|AED97230.1| Protein-tyrosine phosphatase-like, PTPLA [Arabidopsis thaliana]

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 97/179 (54%), Positives = 133/179 (74%)

Query: 1   MLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFF 60
           ++L++ LS K+I   +ASAG +I + QTAA LEV+HGA+GI+PSG   P MQW GRT F 
Sbjct: 77  IILNSFLSNKTIISAYASAGFLISLFQTAAILEVLHGAIGIVPSGFLSPLMQWSGRTHFI 136

Query: 61  LVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPI 120
           L    +I +VQD P L IT +AWC+ E+IRYP YA   +G CP+WLTYLRYT FI +YP 
Sbjct: 137 LAIVGQIKEVQDSPWLSITLVAWCIGEMIRYPHYAFTCLGRCPYWLTYLRYTGFIVIYPT 196

Query: 121 GVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQR 179
           G++GE+L++ +A PY+KE+N++ANFF+  PFSYY+ +  V ++YPF W+KLY  + KQR
Sbjct: 197 GLVGELLIMYKALPYVKERNLYANFFSVFPFSYYDFLWAVLLVYPFLWLKLYLQLFKQR 255

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435072|ref|XP_002284406.1| PREDICTED: 3-hydroxyacyl-CoA dehydratase 2 [Vitis vinifera] gi|297746135|emb|CBI16191.3| unnamed protein product [Vitis vinifera]

 Score =  209 bits (532), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 106/192 (55%), Positives = 137/192 (71%), Gaps = 11/192 (5%)

Query: 2   LLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFL 61
           +LS+ L T+S  G +ASAG+++ +LQT +FLEVVHGA+G++PSGV LP MQW GRT F L
Sbjct: 27  ILSSFLDTRSFNGAYASAGDLVCLLQTVSFLEVVHGAIGLVPSGVLLPLMQWGGRTHFLL 86

Query: 62  VTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIG 121
                IV+VQ+ PS+FITF+AW + EVIRY  YAL+ +G+CP  +TYLRYT FI LYP+G
Sbjct: 87  AIVRRIVEVQELPSVFITFIAWSISEVIRYSHYALHCMGSCPSCITYLRYTAFILLYPVG 146

Query: 122 VL-GEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRG 180
           V  GEM L+ QA P++K KNI          S+Y  V VV + YPF W+KLY H+ KQR 
Sbjct: 147 VAPGEMWLMYQALPFIKRKNI----------SHYYFVWVVLLCYPFLWLKLYLHLFKQRR 196

Query: 181 SKLGKRQEKKKK 192
           SKLGK   KK++
Sbjct: 197 SKLGKHDGKKRR 208

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580590|ref|XP_002531119.1| ptpla domain protein, putative [Ricinus communis] gi|223529315|gb|EEF31284.1| ptpla domain protein, putative [Ricinus communis]

 Score =  209 bits (532), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 102/179 (56%), Positives = 133/179 (74%), Gaps = 2/179 (1%)

Query: 2   LLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFL 61
           +LS L+ST S+   +ASAGE+I +LQ  AFLEV+HGA+G++PSGV  PFMQW GRT F  
Sbjct: 28  ILSTLISTNSVNTAYASAGELICLLQILAFLEVIHGALGLVPSGVLFPFMQWGGRTHFVF 87

Query: 62  VTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIG 121
           +    +++VQ+ PS+FITF  W L EVIRYP YALN +G CP W+ YLRYT FI LYPIG
Sbjct: 88  IVR-NLIEVQELPSVFITFFVWSLSEVIRYPHYALNILGNCPSWINYLRYTAFIVLYPIG 146

Query: 122 VL-GEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQR 179
           +  GEM L+ QA P++K+ ++FANFFA LP +Y++ ++V  V YPF W  LY H+LKQR
Sbjct: 147 IAPGEMWLIYQALPFVKKTSLFANFFAALPLNYHDFLRVGLVCYPFLWFNLYLHLLKQR 205

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|26453242|dbj|BAC43694.1| unknown protein [Arabidopsis thaliana] gi|28950767|gb|AAO63307.1| At5g59770 [Arabidopsis thaliana]

 Score =  209 bits (531), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 97/179 (54%), Positives = 133/179 (74%)

Query: 1   MLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFF 60
           ++L++ LS K+I   +ASAG +I + QTAA LEV+HGA+GI+PSG   P MQW GRT F 
Sbjct: 26  IILNSFLSNKTIISAYASAGFLISLFQTAAILEVLHGAIGIVPSGFLSPLMQWSGRTHFI 85

Query: 61  LVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPI 120
           L    +I +VQD P L IT +AWC+ E+IRYP YA   +G CP+WLTYLRYT FI +YP 
Sbjct: 86  LAIVGQIKEVQDSPWLSITLVAWCIGEMIRYPHYAFTCLGRCPYWLTYLRYTGFIVIYPT 145

Query: 121 GVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQR 179
           G++GE+L++ +A PY+KE+N++ANFF+  PFSYY+ +  V ++YPF W+KLY  + KQR
Sbjct: 146 GLVGELLIMYKALPYVKERNLYANFFSVFPFSYYDFLWAVLLVYPFLWLKLYLQLFKQR 204

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	192
TAIR|locus:2174319	272	AT5G59770 "AT5G59770" [Arabido	1.0	0.705	0.533	1.4e-55
UNIPROTKB|Q2KIP8	254	PTPLB "Very-long-chain (3R)-3-	0.984	0.744	0.314	9.7e-25
UNIPROTKB|Q6Y1H2	254	PTPLB "Very-long-chain (3R)-3-	0.984	0.744	0.314	1.2e-24
MGI|MGI:1918007	254	Ptplb "protein tyrosine phosph	0.984	0.744	0.309	4.2e-24
MGI|MGI:1353592	281	Ptpla "protein tyrosine phosph	0.859	0.587	0.329	2.9e-23
UNIPROTKB|Q4W1W1	249	PTPLA "Very-long-chain (3R)-3-	0.859	0.662	0.323	1.3e-22
UNIPROTKB|B0YJ81	288	PTPLA "Very-long-chain (3R)-3-	0.859	0.572	0.317	7e-22
MGI|MGI:1889341	362	Ptplad1 "protein tyrosine phos	0.942	0.5	0.310	1.1e-21
RGD|1565496	362	Ptplad1 "protein tyrosine phos	0.942	0.5	0.315	1.5e-21
ZFIN|ZDB-GENE-040426-1200	404	ptplad1 "protein tyrosine phos	0.822	0.391	0.335	6e-21

TAIR|locus:2174319 AT5G59770 "AT5G59770" [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 104/195 (53%), Positives = 144/195 (73%)

Query:     1 MLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFF 60
             ++L++ LS K+I   +ASAG +I + QTAA LEV+HGA+GI+PSG   P MQW GRT F 
Sbjct:    77 IILNSFLSNKTIISAYASAGFLISLFQTAAILEVLHGAIGIVPSGFLSPLMQWSGRTHFI 136

Query:    61 LVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPI 120
             L    +I +VQD P L IT +AWC+ E+IRYP YA   +G CP+WLTYLRYT FI +YP 
Sbjct:   137 LAIVGQIKEVQDSPWLSITLVAWCIGEMIRYPHYAFTCLGRCPYWLTYLRYTGFIVIYPT 196

Query:   121 GVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRG 180
             G++GE+L++ +A PY+KE+N++ANFF+  PFSYY+ +  V ++YPF W+KLY  + KQR 
Sbjct:   197 GLVGELLIMYKALPYVKERNLYANFFSVFPFSYYDFLWAVLLVYPFLWLKLYLQLFKQRK 256

Query:   181 SKLGKRQE---KKKK 192
             SKLGK ++   K+K+
Sbjct:   257 SKLGKSKKLHGKRKR 271

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q2KIP8 PTPLB "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2" [Bos taurus (taxid:9913)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 61/194 (31%), Positives = 103/194 (53%)

Query:     2 LLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFL 61
             L+   L+  S    + S  + +   QT A LE++H A+GI+PS V L  +Q   R     
Sbjct:    60 LVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIVPSSVVLTSIQVMSRVFLIW 119

Query:    62 VTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIG 121
                  + +VQ   S+ +  +AW + E+IRY FY  + +   P+ + + RYT+FI LYP+G
Sbjct:   120 AVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARYTLFIVLYPMG 179

Query:   122 VLGEMLLLNQAFPYMKEKNIFA----NFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLK 177
             V GE+L +  A P++++  +++    N +    F YY  + ++ + Y   + +LY HM+ 
Sbjct:   180 VSGELLTIYAALPFVRQAGLYSISLPNKY-NFSFDYYAFLILIMISYIPLFPQLYFHMIH 238

Query:   178 QRGSKLGKRQEKKK 191
             QR   L   +E KK
Sbjct:   239 QRRKILSHTEEHKK 252

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

UNIPROTKB|Q6Y1H2 PTPLB "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2" [Homo sapiens (taxid:9606)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 61/194 (31%), Positives = 102/194 (52%)

Query:     2 LLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFL 61
             L+   L+  S    + S  + +   QT A LE++H A+GI+PS V L   Q   R     
Sbjct:    60 LVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIVPSSVVLTSFQVMSRVFLIW 119

Query:    62 VTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIG 121
                  + +VQ   S+ +  +AW + E+IRY FY  + +   P+ + + RYT+FI LYP+G
Sbjct:   120 AVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARYTLFIVLYPMG 179

Query:   122 VLGEMLLLNQAFPYMKEKNIFA----NFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLK 177
             V GE+L +  A P++++  +++    N +    F YY  + ++ + Y   + +LY HM+ 
Sbjct:   180 VSGELLTIYAALPFVRQAGLYSISLPNKY-NFSFDYYAFLILIMISYIPIFPQLYFHMIH 238

Query:   178 QRGSKLGKRQEKKK 191
             QR   L   +E KK
Sbjct:   239 QRRKILSHTEEHKK 252

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

MGI|MGI:1918007 Ptplb "protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b" [Mus musculus (taxid:10090)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 60/194 (30%), Positives = 101/194 (52%)

Query:     2 LLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFL 61
             L+   L+  S    + S    +   QT A LE++H A+GI+PS V L   Q   R     
Sbjct:    60 LVRAYLAKGSYHSLYYSIERPLKFFQTGALLEILHCAIGIVPSSVVLTSFQVMSRVFLIW 119

Query:    62 VTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIG 121
                  + +VQ   S+ +  +AW + E+IRY FY  + +   P+ + + RYT+FI LYP+G
Sbjct:   120 AVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYIIKWARYTLFIVLYPMG 179

Query:   122 VLGEMLLLNQAFPYMKEKNIFA----NFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLK 177
             V GE+L +  A P++++  +++    N +    F Y+  + ++ + Y   + +LY HM+ 
Sbjct:   180 VTGELLTIYAALPFVRQAGLYSISLPNKY-NFSFDYHAFLILIMISYIPLFPQLYFHMIH 238

Query:   178 QRGSKLGKRQEKKK 191
             QR   L   +E KK
Sbjct:   239 QRRKVLSHTEEHKK 252

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

MGI|MGI:1353592 Ptpla "protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a" [Mus musculus (taxid:10090)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 56/170 (32%), Positives = 93/170 (54%)

Query:    14 GTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDH 73
             G + S  + +   QT A LEVVH  +GI+P+ V +  +Q   R     +    I  +Q+ 
Sbjct:    99 GLYKSIQKTLKFFQTFALLEVVHCLIGIVPTSVLVTGVQVSSRIFMVWLITHSIKPIQNE 158

Query:    74 PSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAF 133
              S+ +  ++W + E+ RY FY  + +   PH++ + RY +FI LYP+GV GE+L +  A 
Sbjct:   159 ESVVLFLVSWTVTEITRYSFYTFSLLDHLPHFIKWARYNLFIILYPVGVAGELLTIYAAL 218

Query:   134 PYMKEKNIFA----NFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQR 179
             PY+K+  +F+    N +  + F YY  + +    Y   + +LY HML+QR
Sbjct:   219 PYVKKSGMFSVRLPNKY-NVSFDYYYFLLITMASYIPLFPQLYFHMLRQR 267

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

UNIPROTKB|Q4W1W1 PTPLA "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1" [Canis lupus familiaris (taxid:9615)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 55/170 (32%), Positives = 93/170 (54%)

Query:    14 GTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDH 73
             G + S  + +   QT A LE+VH  +GI+P+ V +  +Q   R     +    I  +Q+ 
Sbjct:    67 GLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSVIVAGVQVSSRIFMVWLITHSIKPIQNE 126

Query:    74 PSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAF 133
              S+ +  +AW + E+ RY FY  + +   P+++ + RY  FI LYP+GV+GE+L +  A 
Sbjct:   127 ESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWARYNFFIILYPVGVVGELLTIYAAL 186

Query:   134 PYMKEKNIFA----NFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQR 179
             PY+K+  +F+    N +  + F YY  + +    Y   + +LY HML+QR
Sbjct:   187 PYVKKTGMFSIRLPNKY-NVSFDYYYFLLITMASYIPLFPQLYFHMLRQR 235

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0004864 "protein phosphatase inhibitor activity" evidence=IEA

UNIPROTKB|B0YJ81 PTPLA "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1" [Homo sapiens (taxid:9606)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 54/170 (31%), Positives = 92/170 (54%)

Query:    14 GTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDH 73
             G + S  + +   QT A LE+VH  +GI+P+ V +  +Q   R     +    I  +Q+ 
Sbjct:   106 GLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSVIVTGVQVSSRIFMVWLITHSIKPIQNE 165

Query:    74 PSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAF 133
              S+ +  +AW + E+ RY FY  + +   P+++ + RY  FI LYP+GV GE+L +  A 
Sbjct:   166 ESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWARYNFFIILYPVGVAGELLTIYAAL 225

Query:   134 PYMKEKNIFA----NFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQR 179
             P++K+  +F+    N +  + F YY  + +    Y   + +LY HML+QR
Sbjct:   226 PHVKKTGMFSIRLPNKY-NVSFDYYYFLLITMASYIPLFPQLYFHMLRQR 274

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=TAS

GO:0006470 "protein dephosphorylation" evidence=TAS

GO:0007165 "signal transduction" evidence=NAS

GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=TAS

MGI|MGI:1889341 Ptplad1 "protein tyrosine phosphatase-like A domain containing 1" [Mus musculus (taxid:10090)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 59/190 (31%), Positives = 100/190 (52%)

Query:     6 LLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTAC 65
             +L  +S   TF +  ++++  Q  A +E ++ A+G+  + V    +Q+ GR     +   
Sbjct:   174 ILGKESFYDTFHNVADMMYFCQMLALVETLNAAIGVTSTPVLPALIQFLGRNFILFLVFG 233

Query:    66 EIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGE 125
              + ++Q+   +F  F +W  IE+ RYPFY L+ I      LT+LRYTM+IPLYP+G L E
Sbjct:   234 TMEEMQNKAVVFFVFYSWSAIEIFRYPFYMLSCIDMDWKVLTWLRYTMWIPLYPLGCLSE 293

Query:   126 MLLLNQAFPYMKEKNIFANFFAGLP------FSYYNVVQVVFVMYPFAWIKLYSHMLKQR 179
              + + Q+ P   E   F+ F    P      FS++  +QV  VM        + H+ KQR
Sbjct:   294 AVAVIQSIPVFNESGRFS-FTLPYPVKMKVRFSFF--LQVYLVMLFLGLYINFRHLYKQR 350

Query:   180 GSKLGKRQEK 189
               + G++++K
Sbjct:   351 RRRYGQKKKK 360

GO:0005515 "protein binding" evidence=IPI

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IDA

GO:0007254 "JNK cascade" evidence=IDA

GO:0007266 "Rho protein signal transduction" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

RGD|1565496 Ptplad1 "protein tyrosine phosphatase-like A domain containing 1" [Rattus norvegicus (taxid:10116)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 60/190 (31%), Positives = 99/190 (52%)

Query:     6 LLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTAC 65
             L   +S   TF +  ++++  Q  A +E ++ A+G+  S V    +Q+ GR     +   
Sbjct:   174 LYGKESFYDTFHTVADMMYFCQMLALVETLNAAIGVTNSPVLPALIQFLGRNFILFLVFG 233

Query:    66 EIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGE 125
              + ++Q+   +F  F +W  IE+ RYPFY L+ I      LT+LRYTM+IPLYP+G L E
Sbjct:   234 TMEEMQNKAVVFFVFYSWSAIEIFRYPFYMLSCIDMDWKVLTWLRYTMWIPLYPLGCLSE 293

Query:   126 MLLLNQAFPYMKEKNIFANFFAGLP------FSYYNVVQVVFVMYPFAWIKLYSHMLKQR 179
              + + Q+ P   E   F+ F    P      FS++  +QV  VM        + H+ KQR
Sbjct:   294 AVAVIQSIPVFNESGRFS-FTLPYPLRMKVRFSFF--LQVYLVMLFLGLYINFRHLYKQR 350

Query:   180 GSKLGKRQEK 189
               + G++++K
Sbjct:   351 RRRYGQKKKK 360

GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=ISO

GO:0007254 "JNK cascade" evidence=ISO

GO:0007266 "Rho protein signal transduction" evidence=ISO

ZFIN|ZDB-GENE-040426-1200 ptplad1 "protein tyrosine phosphatase-like A domain containing 1" [Danio rerio (taxid:7955)]

 Score = 249 (92.7 bits), Expect = 6.0e-21, P = 6.0e-21
 Identities = 54/161 (33%), Positives = 87/161 (54%)

Query:     6 LLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTAC 65
             +L   S   TF +  ++++  Q  A +EV++ AVG++ +GV   F+Q  GR     V   
Sbjct:   171 ILGQDSFYDTFHTIADVMYFCQMLAIMEVINPAVGLVKTGVMPAFIQVMGRNFILFVIFG 230

Query:    66 EIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGE 125
              +  +Q+ P +F  F  W  IE+ RYPFY L  I      LT+LRYT+++PLYP+GVL E
Sbjct:   231 SLEDMQNKPVVFFVFYLWSTIEIFRYPFYMLACIDTEWKLLTWLRYTIWMPLYPLGVLAE 290

Query:   126 MLLLNQAFPYMKEKNIFANFF---AGLPFSYYNVVQVVFVM 163
              + + Q+ P   E  + +       GL  S+  ++Q+  V+
Sbjct:   291 AVAVIQSIPIFDETKLLSIPLPKATGLSLSFSYILQLYLVV 331

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O14346	HACD_SCHPO	4, ., 2, ., 1, ., -	0.3081	0.8906	0.8221	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.2.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_I1406 hypothetical protein (219 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	192
pfam04387	161	pfam04387, PTPLA, Protein tyrosine phosphatase-lik	1e-54
PLN02838	221	PLN02838, PLN02838, 3-hydroxyacyl-CoA dehydratase	8e-22
COG5198	209	COG5198, Ptpl, Protein tyrosine phosphatase-like p	5e-14

>gnl|CDD|202993 pfam04387, PTPLA, Protein tyrosine phosphatase-like protein, PTPLA

 Score =  170 bits (433), Expect = 1e-54
 Identities = 68/159 (42%), Positives = 96/159 (60%)

Query: 27  QTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLI 86
           QT A LE++H A G++ S V   F+Q   R          + +VQ  P++    +AW + 
Sbjct: 1   QTLAVLEILHAAFGLVRSPVLTTFLQVSSRLFVVWGILYSLPEVQASPAVPSLLIAWSIT 60

Query: 87  EVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFF 146
           E+IRY +YALN +G  P+WLT+LRYT+FI LYP+GVL E+LL+ Q+ PY K+ ++     
Sbjct: 61  EIIRYSYYALNLLGTVPYWLTWLRYTLFIVLYPLGVLSELLLIYQSLPYTKKYSLEMPNA 120

Query: 147 AGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGK 185
               FSYY  +  V ++Y   +  LYSHMLKQR   LGK
Sbjct: 121 LNFSFSYYYFLIFVLLLYIPGFPVLYSHMLKQRRKVLGK 159

This family includes the mammalian protein tyrosine phosphatase-like protein, PTPLA. A significant variation of PTPLA from other protein tyrosine phosphatases is the presence of proline instead of catalytic arginine at the active site. It is thought that PTPLA proteins have a role in the development, differentiation, and maintenance of a number of tissue types. Length = 161

>gnl|CDD|166479 PLN02838, PLN02838, 3-hydroxyacyl-CoA dehydratase subunit of elongase

 Score = 88.3 bits (219), Expect = 8e-22
 Identities = 55/167 (32%), Positives = 80/167 (47%), Gaps = 12/167 (7%)

Query: 27  QTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLI 86
           QTAA LE++HG VG++ S V     Q   R            +V+ H  +    ++W + 
Sbjct: 55  QTAAVLEILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPEVRSHILVTSLVISWSIT 114

Query: 87  EVIRYPFYALN-TIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFA-- 143
           E+IRY F+ +    G  P WL +LRY+ F+ LYP G+  E+ L+  A PYMK    +   
Sbjct: 115 EIIRYSFFGMKEAFGFAPSWLLWLRYSTFLLLYPTGITSEVGLIYIALPYMKASEKYCLR 174

Query: 144 -----NFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGK 185
                NF     F Y+    +V  +Y      +YS+ML QR   L K
Sbjct: 175 MPNKWNF----SFDYFYASILVLAIYVPGSPHMYSYMLGQRKKALSK 217

Length = 221

>gnl|CDD|227525 COG5198, Ptpl, Protein tyrosine phosphatase-like protein (contains Pro instead of catalytic Arg) [General function prediction only]

 Score = 67.2 bits (164), Expect = 5e-14
 Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 13/154 (8%)

Query: 27  QTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLI 86
           QT A +E  + + G + S      MQ   R             + +  +      AW + 
Sbjct: 52  QTFAIMEAANSSAGKVNSRYLTTVMQVISRLFIVWGVFYPYCGIINSWTYPSITTAWSIT 111

Query: 87  EVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFF 146
           E++RY FY     G  P+ L  LRY +F+ LYPIG + EM  L   +             
Sbjct: 112 EIVRYAFYTFRLNGI-PNTLRVLRYNLFLILYPIGFVSEMYCLRALYNA----------- 159

Query: 147 AGLPFSYYNVV-QVVFVMYPFAWIKLYSHMLKQR 179
           AG  FS   VV  +V ++Y   +I L+SHML QR
Sbjct: 160 AGKIFSLLKVVLPIVMLLYIPGFIFLFSHMLAQR 193

Length = 209

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	192
PLN02838	221	3-hydroxyacyl-CoA dehydratase subunit of elongase	100.0
PF04387	164	PTPLA: Protein tyrosine phosphatase-like protein,	100.0
KOG3187	223	consensus Protein tyrosine phosphatase-like protei	100.0
COG5198	209	Ptpl Protein tyrosine phosphatase-like protein (co	100.0

>PLN02838 3-hydroxyacyl-CoA dehydratase subunit of elongase

Probab=100.00  E-value=3.9e-67  Score=443.52  Aligned_cols=180  Identities=31%  Similarity=0.544  Sum_probs=166.2

Q ss_pred             hhccCCccchhHhHhHHHHHHHHHHHHHHHHhhhCCCCCCcchhHHHHHhhhhhheeeecccccccCCchHHHHHHHHHh
Q 029515            6 LLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCL   85 (192)
Q Consensus         6 ~~~~~~~~~~~~~~~~~l~~~Q~~a~lEi~Ha~~GlvrS~~~~t~~Qv~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsl   85 (192)
                      +.++| .+++|++++++++++|++|++||+|+++|+||||+.||++||+||++++|||+...||+++++.++.|++|||+
T Consensus        35 ~~~~~-~~~~~~~v~~~l~~~QtlAilEilHa~~GlVrS~v~~T~~QV~sR~~iv~~v~~~~p~~~~~~~~~~l~~aWs~  113 (221)
T PLN02838         35 LKESG-HEAVYAAVERPLQLAQTAAVLEILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPEVRSHILVTSLVISWSI  113 (221)
T ss_pred             HhccC-cchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcchHHHHHHHHHHHHHHHhhcCcchhcccHHHHHHHHHHH
Confidence            34444 34569999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcchhHHHHhh-hCCCCchhhhcccccccccccchhhHHHHHHHHhccchhhhcccccccC---CCcchHHHHHHHHH
Q 029515           86 IEVIRYPFYALNT-IGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFA---GLPFSYYNVVQVVF  161 (192)
Q Consensus        86 ~EviRY~yY~~~l-~~~~p~~L~WLRYt~FivLYPlGv~~E~~~i~~alp~~~~~~~~s~~mP---~~~f~~~~~l~~~l  161 (192)
                      +|+||||||++++ .|.+|++|+|||||+|+||||+|+.||+.+|++|+|++++++.|+.+||   |++|++.+++++++
T Consensus       114 tEvIRY~yY~~~~~~~~~p~~L~WLRYt~FivLYPlGi~~E~~~i~~al~~~~~~~~~s~~~Pn~~n~sf~~~~~l~~~l  193 (221)
T PLN02838        114 TEIIRYSFFGMKEAFGFAPSWLLWLRYSTFLLLYPTGITSEVGLIYIALPYMKASEKYCLRMPNKWNFSFDYFYASILVL  193 (221)
T ss_pred             HHHHHHHHHHHHHhcCCCcHHHHHHHHhccceecchHHHHHHHHHHHhchhhhcccccchhcCcccccchhHHHHHHHHH
Confidence            9999999999874 5999999999999999999999999999999999999999999999999   44445555678899


Q ss_pred             HHhhhhHHHHHHHHHHHHchhhchh
Q 029515          162 VMYPFAWIKLYSHMLKQRGSKLGKR  186 (192)
Q Consensus       162 ~~yipg~~~ly~hMl~QRkK~l~~~  186 (192)
                      ++|+||+|+||+||++||||+++|+
T Consensus       194 ~~YiPg~~~ly~hM~~QRkK~l~~k  218 (221)
T PLN02838        194 AIYVPGSPHMYSYMLGQRKKALSKS  218 (221)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHhccc
Confidence            9999999999999999999999643

>PF04387 PTPLA: Protein tyrosine phosphatase-like protein, PTPLA; InterPro: IPR007482 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity

Probab=100.00  E-value=1e-64  Score=412.08  Aligned_cols=161  Identities=44%  Similarity=0.802  Sum_probs=155.9

Q ss_pred             HHHHHHHHHHhhhCCCCCCcchhHHHHHhhhhhheeeecccccccCCchHHHHHHHHHhhhhcchhHHHHhhhCCCCchh
Q 029515           27 QTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWL  106 (192)
Q Consensus        27 Q~~a~lEi~Ha~~GlvrS~~~~t~~Qv~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsl~EviRY~yY~~~l~~~~p~~L  106 (192)
                      |++|++||+|+++|+||||+.+|++||+||++++|+++...||++++++++.|++|||++|+||||||+++++|.+|++|
T Consensus         1 Q~~a~lEi~h~~~Glv~S~~~~t~~Qv~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsl~EviRY~yY~~~l~~~~p~~L   80 (164)
T PF04387_consen    1 QTLAVLEILHAALGLVRSPVLTTFMQVFSRLFVVWGVIYPFPEVQSSPAVPLLLIAWSLTEVIRYPYYALKLLGIVPYWL   80 (164)
T ss_pred             CchHHHHHHHHHhccccCccHHHHHHHHHHHHeehhhhccccccccccchhhHHHHHHhhhcchhHHHHHHhcCCCchHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccccccccccchhhHHHHHHHHhccchhhhcccccccC---CCcchHHHHHHHHHHHhhhhHHHHHHHHHHHHchhh
Q 029515          107 TYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFA---GLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKL  183 (192)
Q Consensus       107 ~WLRYt~FivLYPlGv~~E~~~i~~alp~~~~~~~~s~~mP---~~~f~~~~~l~~~l~~yipg~~~ly~hMl~QRkK~l  183 (192)
                      +|||||+|+||||+|++||+.++++|+|++++++.|+.+||   |+++++.+++++++++|+||+|+||+||++||||++
T Consensus        81 ~WLRYs~FivLYPlG~~~E~~~~~~al~~~~~~~~~~~~~pn~~n~~~~~~~~~~~~l~~y~pg~~~ly~hM~~qRrK~l  160 (164)
T PF04387_consen   81 TWLRYSAFIVLYPLGILSELLLIYRALPYIKETKRYSVRMPNSWNFSFSYYYFLIFVLLLYIPGFPFLYSHMLKQRRKKL  160 (164)
T ss_pred             HHHHHhhHhhccchHHHHHHHHHHHhCcccccCCeeeeecCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999   666777788999999999999999999999999999


Q ss_pred             chhh
Q 029515          184 GKRQ  187 (192)
Q Consensus       184 ~~~~  187 (192)
                      +|+|
T Consensus       161 ~~~~  164 (164)
T PF04387_consen  161 GKKK  164 (164)
T ss_pred             ccCC
Confidence            8653

Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This family includes the mammalian protein tyrosine phosphatase-like protein, PTPLA. A significant variation of PTPLA from other protein tyrosine phosphatases is the presence of proline instead of catalytic arginine at the active site. It is thought that PTPLA proteins have a role in the development, differentiation, and maintenance of a number of tissue types [].

>KOG3187 consensus Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg) [General function prediction only]

Probab=100.00  E-value=2.2e-60  Score=400.48  Aligned_cols=185  Identities=35%  Similarity=0.619  Sum_probs=174.8

Q ss_pred             hccCCccchhHhHhHHHHHHHHHHHHHHHHhhhCCCCCCcchhHHHHHhhhhhheeeecccccccCCchHHHHHHHHHhh
Q 029515            7 LSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLI   86 (192)
Q Consensus         7 ~~~~~~~~~~~~~~~~l~~~Q~~a~lEi~Ha~~GlvrS~~~~t~~Qv~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsl~   86 (192)
                      .++|+.+++||++++.+++||++|++|+.|+++|+|+|++++|++||.||++++|++++.+|++++++++..++.||+++
T Consensus        36 ~~~~~~~~~y~si~~~l~~~Qtla~lEi~~~~~g~v~S~~v~t~~Qv~sRl~il~~i~~~~~~~~~~~~~~~l~~~ws~t  115 (223)
T KOG3187|consen   36 LTKGSPAVLYDSIEKVLKFCQTLALLEIINASFGLVKSSPVVTLFQVSSRLFILWGIFHMCSIIQASAVVFFLLIAWSLT  115 (223)
T ss_pred             ccCCCccccHHHHHHHHHHHHHHHHHHHHHHHhccccCCceeeeeeecccceehhhhhhccchhhccchHHHHHHHHHHH
Confidence            45677888899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcchhHHHHhhhCCCCchhhhcccccccccccchhhHHHHHHHHhccchhhhcccccccC---CCcchHHHHHHHHHHH
Q 029515           87 EVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFA---GLPFSYYNVVQVVFVM  163 (192)
Q Consensus        87 EviRY~yY~~~l~~~~p~~L~WLRYt~FivLYPlGv~~E~~~i~~alp~~~~~~~~s~~mP---~~~f~~~~~l~~~l~~  163 (192)
                      |++||+||+++++|..|++++|||||+|++|||+|++||+.++++|+|+.++++.+|++||   |.+||+.+|+++.+++
T Consensus       116 EIiRY~fY~f~~~~~~p~~l~wlRYt~Fi~LYP~Gi~~E~l~i~~al~~~~~~~~~sv~~pn~~n~~f~~~~fL~i~ml~  195 (223)
T KOG3187|consen  116 EIIRYSFYAFNLLGVLPKLLTWLRYTLFILLYPIGITSELLTLYAALPAAGETERFSVVMPNKLNISFDFFSFLWIVMLL  195 (223)
T ss_pred             HHHHHHHHHHHhccCCchhhhHhhhhhheeeecceehhhHHHHHHHHHHhcccceeEEEcCccccchhHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999   5566666678888999


Q ss_pred             hhhhHHHHHHHHHHHHchhhchhhhhhc
Q 029515          164 YPFAWIKLYSHMLKQRGSKLGKRQEKKK  191 (192)
Q Consensus       164 yipg~~~ly~hMl~QRkK~l~~~~~kkk  191 (192)
                      |+||+|++|+||.+||||.++++++|||
T Consensus       196 Yipgf~~l~~hm~~QRkk~l~~~r~~~~  223 (223)
T KOG3187|consen  196 YIPGFYQLYSHMLKQRKKILKKKRKKKK  223 (223)
T ss_pred             HHcchHHHHHHHHHHHHhhcccccccCC
Confidence            9999999999999999999987766653

>COG5198 Ptpl Protein tyrosine phosphatase-like protein (contains Pro instead of catalytic Arg) [General function prediction only]

Probab=100.00  E-value=1.8e-46  Score=304.59  Aligned_cols=164  Identities=29%  Similarity=0.444  Sum_probs=142.9

Q ss_pred             cCCccchhHhHhHHHHHHHHHHHHHHHHhhhCCCCCCcchhHHHHHhhhhhheeeecccccccCCchHHHHHHHHHhhhh
Q 029515            9 TKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEV   88 (192)
Q Consensus         9 ~~~~~~~~~~~~~~l~~~Q~~a~lEi~Ha~~GlvrS~~~~t~~Qv~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsl~Ev   88 (192)
                      +++.+ .|+...+...++|++|++|+.|+.+|.|+|++.||.+||.||++++|||+++.-..-++|.++.+.+|||++|+
T Consensus        35 t~dpa-~f~et~~va~lvQt~ai~E~~ns~~g~v~S~~LtTv~Qv~SRl~ivwgvf~p~~~~i~s~~y~s~~~aWsitei  113 (209)
T COG5198          35 TMDPA-VFHETLRVAGLVQTFAIMEAANSSAGKVNSRYLTTVMQVISRLFIVWGVFYPYCGIINSWTYPSITTAWSITEI  113 (209)
T ss_pred             ccChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHH
Confidence            35566 48999999999999999999999999999999999999999999999999665444458999999999999999


Q ss_pred             cchhHHHHhhhCCCCchhhhcccccccccccchhhHHHHHHHHhccchhhhcccccccCCCcchHH-HHHHHHHHHhhhh
Q 029515           89 IRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYY-NVVQVVFVMYPFA  167 (192)
Q Consensus        89 iRY~yY~~~l~~~~p~~L~WLRYt~FivLYPlGv~~E~~~i~~alp~~~~~~~~s~~mP~~~f~~~-~~l~~~l~~yipg  167 (192)
                      +||.||.+++-| .|..++|||||+|.+|||+|+.+|+.|++.+.--.+.  .|         ++. -.+.+++.+||||
T Consensus       114 vRYafY~F~lng-~p~~l~~lRYNlFlilyPiG~~sE~~~~~~~~naa~~--~~---------Sllk~vl~~~ml~YiPG  181 (209)
T COG5198         114 VRYAFYTFRLNG-IPNTLRVLRYNLFLILYPIGFVSEMYCLRALYNAAGK--IF---------SLLKVVLPIVMLLYIPG  181 (209)
T ss_pred             HHHHHHHHHhcC-CchhhhhhhhhhhhhhcchHHHHHHHHHHHHHHHHHH--HH---------HHHHHHHHHHHHHhCCc
Confidence            999999999855 8999999999999999999999999999887653333  22         222 2356688899999


Q ss_pred             HHHHHHHHHHHHchhhch
Q 029515          168 WIKLYSHMLKQRGSKLGK  185 (192)
Q Consensus       168 ~~~ly~hMl~QRkK~l~~  185 (192)
                      +++||+||++||||..+.
T Consensus       182 f~~lf~HMlaQRkk~~K~  199 (209)
T COG5198         182 FIFLFSHMLAQRKKSRKV  199 (209)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999999853

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00