Citrus Sinensis ID: 029519

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190--
Protein Sequence
MTVDGILRNVYNTTTASTTDATLLDAQITLVDTNSNLIANENDQNGAVSAGAMKSVDDVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMDVKAFANVTERLSGGVYAFDQPAAASPFQVEGAIVGFGNGVEVVGGRGKRGRVMLEPLDKAAQQRQRRMIKNRESAARSRERKQVTKLCSN
Secondary Structure (PSIPRED)
ccHHHHHHHHccccccccccccccccHHccccccccccccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccHHHHHHHccccEcccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MTVDGILRNvyntttasttdatLLDAQITLvdtnsnlianendqngavsagamkSVDDVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAgavedsaggddmdVKAFANVTERlsggvyafdqpaaaspfqveGAIVGFGngvevvggrgkrgrvmlepLDKAAQQRQRRMIKNRESAARSRERKQVTKLCSN
Flexible Loop (DISEMBL)
mtvdgilrnvyntttasttdatlLDAQITLVDTNSNLIanendqngavsagamksvDDVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMDVKAFANVTERLSGGVYAFDQPAAASPFQVEGAIVGFGNGVEVVggrgkrgrvmlepldkaaqqrqrRMIKnresaarsrerkqvtklcsn
Low Complexity Region (SEG)
MTVDGILRNVYNtttasttdatlldaQITLVDTNSNLIANENDQNGAVSAGAMKSVDDVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMDVKAFANVTERLSGGVYAFDQPAAASPFQVEGAIvgfgngvevvggrgkrgrvMLEPLDKAAQQRQRRMIKNRESAARSRERKQVTKLCSN
Disordered region (IsUnstruct)
****GILRNVYNTTTASTTDATLLDAQITLVDTNSNLIA****************VDDVWREIV******************EDFLAK************MDVKAFANVTERLSGGVYAFDQPAAASPFQVEGAIVGFGNGVEVVGGRG*******************************************
Disordered Region (DISOPRED)
MTVDGILRNVYNTT*****************************************VDDVWR********************LEDFLAKAGA*****************************************************************************************************
Disordered Region (DISEMBL)
MTVDGILRNVYNTTTASTTDATLLDAQITLVDTNSNLIANENDQNGAVSAGAMKSVDDVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMDVKAFANVTERLSGGVYAFDQPAAASPFQVEGAIVGFGNGVEVVGGRGKRGRVMLEPLDK*******************************
Disordered Region (DISPRO)
*TVDGIL*NVYNTT****************************************SVDDVWREIVS**************MTLEDFLAKAGAVEDSAGGDDMDVKAFANVTERLSGGVYAFDQPAAASPFQVEGAIVGFGNGVEVVG*********LEPLDKAA*Q******KNRESAARS**********S*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTVDGILRNVYNTTTASTTDATLLDAQITLVDTNSNLIANENDQNGAVSAGAMKSVDDVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMDVKAFANVTERLSGGVYAFDQPAAASPFQVEGAIVGFGNGVEVVGGRGKRGRVMLEPLDKAAQQRQRRMIKNRESAARSRERKQVTKLCSN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	192	2.2.26 [Sep-21-2011]
P42777	270	G-box-binding factor 4 OS	no	no	0.645	0.459	0.595	2e-30
Q9LES3	297	ABSCISIC ACID-INSENSITIVE	no	no	0.661	0.427	0.333	4e-10
Q9C5Q2	262	ABSCISIC ACID-INSENSITIVE	no	no	0.640	0.469	0.349	5e-08
Q9SJN0	442	Protein ABSCISIC ACID-INS	no	no	0.770	0.334	0.277	8e-07
Q9M7Q5	392	ABSCISIC ACID-INSENSITIVE	no	no	0.234	0.114	0.583	3e-06
Q9M7Q2	431	ABSCISIC ACID-INSENSITIVE	no	no	0.234	0.104	0.583	2e-05
Q6ZDF3	318	bZIP transcription factor	no	no	0.25	0.150	0.460	3e-05
Q9M7Q4	416	ABSCISIC ACID-INSENSITIVE	no	no	0.140	0.064	0.740	0.0003
Q9M7Q3	454	ABSCISIC ACID-INSENSITIVE	no	no	0.031	0.013	0.740	0.0004

>sp|P42777|GBF4_ARATH G-box-binding factor 4 OS=Arabidopsis thaliana GN=GBF4 PE=1 SV=1

 Score =  132 bits (331), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/141 (59%), Positives = 99/141 (70%), Gaps = 17/141 (12%)

Query: 54  KSVDDVWREIVSGEKKE--MKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMDVKAFANVTE 111
           KSVDDVW+EIVSGE+K   MKEE  +++MTLEDFLAKA    D    D++DVK     TE
Sbjct: 85  KSVDDVWKEIVSGEQKTIMMKEEEPEDIMTLEDFLAKAEM--DEGASDEIDVKI---PTE 139

Query: 112 RLSG-GVYAFDQPAA-ASPFQ-VEGAIVGFGNGVEVVGGRGKRGRVMLEPLDKAAQQRQR 168
           RL+  G Y FD P    S FQ VEG++   G GV     RGKRGRVM+E +DKAA QRQ+
Sbjct: 140 RLNNDGSYTFDFPMQRHSSFQMVEGSM---GGGV----TRGKRGRVMMEAMDKAAAQRQK 192

Query: 169 RMIKNRESAARSRERKQVTKL 189
           RMIKNRESAARSRERKQ  ++
Sbjct: 193 RMIKNRESAARSRERKQAYQV 213

Binds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LES3|AI5L2_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana GN=DPBF3 PE=1 SV=1

 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 35/162 (21%)

Query: 54  KSVDDVWREIV------SGEKKEMKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMD----- 102
           K+VD+VW++I       S  ++  K+  + EM TLED L KAG V ++  G + D     
Sbjct: 91  KTVDEVWKDIQQNKNGGSAHERRDKQPTLGEM-TLEDLLLKAGVVTETIPGSNHDGPVGG 149

Query: 103 ------VKAFANVTERLSGGVY----AFDQPAAASPFQV--------EGAIVGFGNGVEV 144
                      N+T+      Y    +  QP A  P+ V        + +++G  +  + 
Sbjct: 150 GSAGSGAGLGQNITQVGPWIQYHQLPSMPQPQAFMPYPVSDMQAMVSQSSLMGGLSDTQT 209

Query: 145 VGGRGKRGRVML-EPLDKAAQQRQRRMIKNRESAARSRERKQ 185
            G    R RV   E ++K  ++RQ+RMIKNRESAARSR RKQ
Sbjct: 210 PG----RKRVASGEVVEKTVERRQKRMIKNRESAARSRARKQ 247

Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C5Q2|AI5L3_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arabidopsis thaliana GN=DPBF4 PE=1 SV=1

 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 69/146 (47%), Gaps = 23/146 (15%)

Query: 54  KSVDDVWREIVSGE-------KKEMKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMDVKAF 106
           K+VD+VWR+I   +           K+  + E+ TLED L +AG V ++       V   
Sbjct: 76  KTVDEVWRDIQQDKNGNGTSTTTTHKQPTLGEI-TLEDLLLRAGVVTET-------VVPQ 127

Query: 107 ANVTERLSGGVYA--FDQPAAASPFQVEGA-----IVGFGNGVEVVGGRGKRGRVMLEPL 159
            NV    S G +     QP     F          +V  G   +     G R RV  E +
Sbjct: 128 ENVVNIASNGQWVEYHHQPQQQQGFMTYPVCEMQDMVMMGGLSDTPQAPG-RKRVAGEIV 186

Query: 160 DKAAQQRQRRMIKNRESAARSRERKQ 185
           +K  ++RQ+RMIKNRESAARSR RKQ
Sbjct: 187 EKTVERRQKRMIKNRESAARSRARKQ 212

Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJN0|ABI5_ARATH Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis thaliana GN=ABI5 PE=1 SV=1

 Score = 53.5 bits (127), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 95/252 (37%), Gaps = 104/252 (41%)

Query: 34  NSNLIANEND--QNGAVSAGAM---KSVDDVWREIV------------------------ 64
           N   IANE+   + G+++  A    K+VD+VW EI                         
Sbjct: 130 NKRGIANESSLPRQGSLTLPAPLCRKTVDEVWSEIHRGGGSGNGGDSNGRSSSSNGQNNA 189

Query: 65  -SGEKKEMKEEAIDEMMTLEDFLAKAGAVED----------------------------- 94
            +G +   ++    EM TLEDFL KAG V +                             
Sbjct: 190 QNGGETAARQPTFGEM-TLEDFLVKAGVVREHPTNPKPNPNPNQNQNPSSVIPAAAQQQL 248

Query: 95  ----------SAGGDDMDVKAFANVTERLSGGVYAFDQPAAA------------------ 126
                     S  G  M V   +   +R  GG Y    P  A                  
Sbjct: 249 YGVFQGTGDPSFPGQAMGVGDPSGYAKRTGGGGYQQAPPVQAGVCYGGGVGFGAGGQQMG 308

Query: 127 -----SPFQVEGAIVGFGN--------GVEVVGGRGKRGRVMLEPLDKAAQQRQRRMIKN 173
                SP   +G  +G G         GV++ G RG++ RV+  P++K  ++RQRRMIKN
Sbjct: 309 MVGPLSPVSSDG--LGHGQVDNIGGQYGVDMGGLRGRK-RVVDGPVEKVVERRQRRMIKN 365

Query: 174 RESAARSRERKQ 185
           RESAARSR RKQ
Sbjct: 366 RESAARSRARKQ 377

Participates in ABA-regulated gene expression during seed development and subsequent vegetative stage by acting as the major mediator of ABA repression of growth. Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 and Em6 genes promoters. Can also trans-activate its own promoter, suggesting that it is autoregulated. Plays a role in sugar-mediated senescence.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q5|AI5L4_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 4 OS=Arabidopsis thaliana GN=ABF1 PE=1 SV=1

 Score = 52.0 bits (123), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 32/48 (66%), Gaps = 3/48 (6%)

Query: 142 VEVVGGRGKRGRVMLEPLDKAAQQRQRRMIKNRESAARSRERKQVTKL 189
           V  V GRG+R    LE   K  ++RQ+RMIKNRESAARSR RKQ   L
Sbjct: 293 VPYVFGRGRRSNTGLE---KVVERRQKRMIKNRESAARSRARKQAYTL 337

Binds to the ABA-responsive element (ABRE). Could participate in abscisic acid-regulated gene expression.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q2|AI5L7_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 7 OS=Arabidopsis thaliana GN=ABF4 PE=1 SV=1

 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 142 VEVVGGRGKRGRVMLEPLDKAAQQRQRRMIKNRESAARSRERKQVTKL 189
           V  V  RG+R    LE   K  ++RQRRMIKNRESAARSR RKQ   L
Sbjct: 333 VPYVLNRGRRSNTGLE---KVIERRQRRMIKNRESAARSRARKQAYTL 377

Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6ZDF3|TRAB1_ORYSJ bZIP transcription factor TRAB1 OS=Oryza sativa subsp. japonica GN=TRAB1 PE=1 SV=1

 Score = 48.5 bits (114), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 34/63 (53%), Gaps = 15/63 (23%)

Query: 123 PAAASPFQVEGAIVGFGNGVEVVGGRGKRGRVMLEPLDKAAQQRQRRMIKNRESAARSRE 182
           P A  P+  EG I G  +G  V               +K  ++RQRRMIKNRESAARSR 
Sbjct: 205 PMAPVPYPFEGVIRGRRSGGNV---------------EKVVERRQRRMIKNRESAARSRA 249

Query: 183 RKQ 185
           RKQ
Sbjct: 250 RKQ 252

Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9M7Q4|AI5L5_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana GN=ABF2 PE=1 SV=1

 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/27 (74%), Positives = 24/27 (88%)

Query: 159 LDKAAQQRQRRMIKNRESAARSRERKQ 185
           ++K  ++RQRRMIKNRESAARSR RKQ
Sbjct: 332 VEKVVERRQRRMIKNRESAARSRARKQ 358

Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q3|AI5L6_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 6 OS=Arabidopsis thaliana GN=ABF3 PE=1 SV=1

 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/27 (74%), Positives = 24/27 (88%)

Query: 159 LDKAAQQRQRRMIKNRESAARSRERKQ 185
           L+K  ++RQ+RMIKNRESAARSR RKQ
Sbjct: 368 LEKVIERRQKRMIKNRESAARSRARKQ 394

Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	192
225460656	275	PREDICTED: G-box-binding factor 4 [Vitis	0.927	0.647	0.611	1e-54
224085121	314	predicted protein [Populus trichocarpa]	0.916	0.560	0.570	1e-44
449497099	301	PREDICTED: G-box-binding factor 4-like [	0.901	0.574	0.558	4e-44
449446409	314	PREDICTED: G-box-binding factor 4-like [	0.921	0.563	0.509	2e-42
224062878	305	predicted protein [Populus trichocarpa]	0.937	0.590	0.533	3e-42
21554353	315	unknown [Arabidopsis thaliana]	0.921	0.561	0.521	4e-42
151303119	250	transcription factor TF3 [Gossypium hirs	0.937	0.72	0.593	4e-42
15240086	315	basic leucine zipper transcription facto	0.921	0.561	0.516	5e-42
297791457	308	hypothetical protein ARALYDRAFT_494588 [	0.937	0.584	0.495	1e-39
255566614	299	transcription factor, putative [Ricinus	0.979	0.628	0.519	9e-38

>gi|225460656|ref|XP_002266826.1| PREDICTED: G-box-binding factor 4 [Vitis vinifera]

 Score =  218 bits (554), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/193 (61%), Positives = 151/193 (78%), Gaps = 15/193 (7%)

Query: 1   MTVDGILRNVYNTTTASTTDATLLDAQITLVDTNSNLIANENDQNGAVSAGAMKSVDDVW 60
           MTVDG+LRNVY  + A  +++TL+DA+ITLVD+ +  +A   +  GA +A   K+VDDVW
Sbjct: 38  MTVDGLLRNVY--SAAPPSESTLVDAEITLVDSGTGAMA---ELEGAPAA---KTVDDVW 89

Query: 61  REIVSGE--KKEMKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMDVKAFANVTERLSGGVY 118
           REIV+G   ++E KEE  D+MMTLEDFLAKAGAVE+   G+D DVK    VT+RLSGG++
Sbjct: 90  REIVAGGGGRRECKEEVEDDMMTLEDFLAKAGAVEEE--GEDRDVK-VPLVTQRLSGGIF 146

Query: 119 AFDQ--PAAASPFQVEGAIVGFGNGVEVVGGRGKRGRVMLEPLDKAAQQRQRRMIKNRES 176
           AFD   P+  +P QVEG+++GFGNG+E+VGGRGKR   +LEPLDKAAQQ+QRRMIKNRES
Sbjct: 147 AFDPVPPSPITPAQVEGSVIGFGNGMEIVGGRGKRRAPVLEPLDKAAQQKQRRMIKNRES 206

Query: 177 AARSRERKQVTKL 189
           AARSRERKQ  ++
Sbjct: 207 AARSRERKQAYQV 219

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085121|ref|XP_002307500.1| predicted protein [Populus trichocarpa] gi|222856949|gb|EEE94496.1| predicted protein [Populus trichocarpa]

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/207 (57%), Positives = 136/207 (65%), Gaps = 31/207 (14%)

Query: 1   MTVDGILRNVYNTTTASTTDATLLDAQITLVDTNSNLIANENDQNGA-------VSAGAM 53
           MTVDGILRNVY    + +T++TLL AQITL++T +       + NG        V     
Sbjct: 57  MTVDGILRNVY---ASPSTESTLLGAQITLMETPNPPPPPPIETNGTDNQDMSVVIPQET 113

Query: 54  KSVDDVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMDVKAFANVTERL 113
           K+ DD+WREIV+G +KEMK+E  DEMMTLEDFLAKAGAV D  G D  DVK      ERL
Sbjct: 114 KTADDIWREIVAG-RKEMKDEP-DEMMTLEDFLAKAGAV-DVVGEDGDDVKMPQ--PERL 168

Query: 114 SGGVYAFDQPAAASPFQV----EGAIVGFGNGVEV-----------VGGRGKRGRVMLEP 158
           SGG+YAFD P   S FQV    EG+IVGFGNGVEV            G   +   V++EP
Sbjct: 169 SGGLYAFD-PVPPSAFQVLDKVEGSIVGFGNGVEVELVAGSGGGGGGGRGKRGRTVVMEP 227

Query: 159 LDKAAQQRQRRMIKNRESAARSRERKQ 185
           LDKAAQQRQRRMIKNRESAARSRERKQ
Sbjct: 228 LDKAAQQRQRRMIKNRESAARSRERKQ 254

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449497099|ref|XP_004160311.1| PREDICTED: G-box-binding factor 4-like [Cucumis sativus]

 Score =  182 bits (463), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/197 (55%), Positives = 139/197 (70%), Gaps = 24/197 (12%)

Query: 1   MTVDGILRNVYNTTTASTTDATLLDAQITLVD---TNSNLIANENDQNGAVSAGAMKSVD 57
           MTVDG+L N +++    T  + LLDAQITLVD   TNS+ + + N  + +V A   K+VD
Sbjct: 57  MTVDGLLPNAFDSN--PTESSILLDAQITLVDPTTTNSSAVIDSNHNSSSV-APPPKTVD 113

Query: 58  DVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMDVKAFANVTERLSGGV 117
           DVWREIVSGE+KE+KEE  +E++TLEDFL K+GAV         DVK F   TERLSGG+
Sbjct: 114 DVWREIVSGERKELKEEVANEIITLEDFLMKSGAVPVE------DVK-FPQ-TERLSGGI 165

Query: 118 YAFDQPAAASPFQ----VEGAIVGFGNGVEVVGGRGKRGRVM-----LEPLDKAAQQRQR 168
           ++FD P  ++ FQ    +EG+I+GF NGV+++G  G  GR       LEPLDKAA+QRQR
Sbjct: 166 FSFD-PIPSTTFQALDKIEGSIIGFANGVDLIGSGGSGGRGKRGRAALEPLDKAAEQRQR 224

Query: 169 RMIKNRESAARSRERKQ 185
           RMIKNRESAARSRERKQ
Sbjct: 225 RMIKNRESAARSRERKQ 241

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446409|ref|XP_004140964.1| PREDICTED: G-box-binding factor 4-like [Cucumis sativus]

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/214 (50%), Positives = 141/214 (65%), Gaps = 37/214 (17%)

Query: 1   MTVDGILRNVYNTTTASTTDATLLDAQITLVDT----------------NSNLIANENDQ 44
           MTVDG+L N +++    T  + LLDAQITLVD+                NS+ + + N  
Sbjct: 57  MTVDGLLPNAFDSNP--TESSILLDAQITLVDSPNPSSLHIDTTTPTTTNSSAVIDSNHN 114

Query: 45  NGAVSAGAMKSVDDVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMDVK 104
           + +V A   K+VDDVWREIVSGE+KE+KEE  +E++TLEDFL K+GAV         DVK
Sbjct: 115 SSSV-APPPKTVDDVWREIVSGERKELKEEVANEIITLEDFLMKSGAVPVE------DVK 167

Query: 105 AFANVTERLSGGVYAFDQPAAASPFQ----VEGAIVGFGNGVEVVGGRGKRGRVM----- 155
            F   TERLSGG+++FD P  ++ FQ    +EG+I+GF NGV+++G  G  GR       
Sbjct: 168 -FPQ-TERLSGGIFSFD-PIPSTTFQALDKIEGSIIGFANGVDLIGSGGSGGRGKRGRAA 224

Query: 156 LEPLDKAAQQRQRRMIKNRESAARSRERKQVTKL 189
           LEPLDKAA+QRQRRMIKNRESAARSRERKQ  ++
Sbjct: 225 LEPLDKAAEQRQRRMIKNRESAARSRERKQAYQV 258

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062878|ref|XP_002300915.1| predicted protein [Populus trichocarpa] gi|222842641|gb|EEE80188.1| predicted protein [Populus trichocarpa]

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/212 (53%), Positives = 137/212 (64%), Gaps = 32/212 (15%)

Query: 1   MTVDGILRNVYNTTTASTTDATLLDAQITLVDTNSNLIANEND-------QNGAVSAGAM 53
           MTVDGILR+VY    + +T++TLLDAQITL+++  +L   + +           +     
Sbjct: 56  MTVDGILRSVY---ASPSTESTLLDAQITLMESPDHLPHPQIETDDTDDQDMSDIIPQEN 112

Query: 54  KSVDDVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMDVKAFANVTERL 113
           K+ DD+WREIV G +KEMK+E  DEMMTLEDFLAKAGAV D  G D  +VK      ERL
Sbjct: 113 KTADDIWREIVVG-RKEMKDEP-DEMMTLEDFLAKAGAV-DVVGEDGDEVKMPP--PERL 167

Query: 114 SGGVYAFDQPAAASPFQV----EGAIVGFGNGVEV------------VGGRGKRGRVMLE 157
           SGG+YAFD    +S FQV    EG+IVGFGNGVEV             G   +   V +E
Sbjct: 168 SGGLYAFDSLPPSS-FQVLDKEEGSIVGFGNGVEVELVAGSGGGGSGGGRGKRGRGVAME 226

Query: 158 PLDKAAQQRQRRMIKNRESAARSRERKQVTKL 189
           PLDKAAQQRQRRMIKNRESAARSRERKQ  ++
Sbjct: 227 PLDKAAQQRQRRMIKNRESAARSRERKQAYQV 258

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21554353|gb|AAM63460.1| unknown [Arabidopsis thaliana]

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/211 (52%), Positives = 138/211 (65%), Gaps = 34/211 (16%)

Query: 1   MTVDGILRNVYNTTTASTTDATLLDAQITLVD-----------TNSNLIANENDQNGAVS 49
           MTV+GIL + + +   + T+++LLDA I L+D           T S+++   +   G  +
Sbjct: 59  MTVEGILHDTFASDPPAPTESSLLDASINLMDASPAPMEITTTTASDVV---DHGGGTET 115

Query: 50  AGAMKSVDDVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAGAVED----SAGGDDMDVKA 105
               KSVD+VWRE+VSGE K MKEE  +E+MTLEDFLAKA AVED    +A  +D+DVK 
Sbjct: 116 TRGGKSVDEVWREMVSGEGKGMKEETSEEIMTLEDFLAKA-AVEDETAVTASAEDLDVKI 174

Query: 106 FANVTERLSGGVYAFDQPAAA-SPFQ----VEGAIVGFGNGVEVVGG--RGKRGRVMLEP 158
              VT       Y FD  A   +PFQ    VEG+IV FGNG++V GG  RGKR RVM+EP
Sbjct: 175 --PVTN------YGFDHSAPPHNPFQMIDKVEGSIVAFGNGLDVYGGGARGKRARVMVEP 226

Query: 159 LDKAAQQRQRRMIKNRESAARSRERKQVTKL 189
           LDKAA QRQRRMIKNRESAARSRERKQ  ++
Sbjct: 227 LDKAAAQRQRRMIKNRESAARSRERKQAYQV 257

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|151303119|gb|ABR92762.1| transcription factor TF3 [Gossypium hirsutum]

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/204 (59%), Positives = 140/204 (68%), Gaps = 24/204 (11%)

Query: 1   MTVDGILRNVYNTTTASTTDATLLDAQITLVDTNSNLIANENDQNGAVSAGA------MK 54
           MTVDGILRNVY  + A +T+ TL+DA ITL+D       +EN +   V   A       K
Sbjct: 45  MTVDGILRNVY--SVAPSTETTLVDASITLIDAPIPNSVSENPEVPQVQTAADCNNNVAK 102

Query: 55  SVDDVWREIVSGEKKE--MKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMDVKAFANVTER 112
           SVD+VWREIVSGE+KE  MKEE  DEMMTLEDFLAKAGAVE++A     +VK      +R
Sbjct: 103 SVDEVWREIVSGERKEITMKEEVPDEMMTLEDFLAKAGAVEEAAAVASAEVKLHP---DR 159

Query: 113 LSGGVYAFDQPAAASPFQV----EGAIVGFGNGVEVVGGRGKRGR------VMLEPLDKA 162
           LSGGVY FD P     FQ+    EG+IVG GNG+EV+G  G  GR      V++EPLDKA
Sbjct: 160 LSGGVYTFD-PVGGGAFQILDKMEGSIVGLGNGMEVIGSGGGGGRGKRGRGVLMEPLDKA 218

Query: 163 AQQRQRRMIKNRESAARSRERKQV 186
           AQQRQRRMIKNRESAARSRERKQV
Sbjct: 219 AQQRQRRMIKNRESAARSRERKQV 242

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15240086|ref|NP_199221.1| basic leucine zipper transcription factor [Arabidopsis thaliana] gi|9758567|dbj|BAB09068.1| unnamed protein product [Arabidopsis thaliana] gi|18175622|gb|AAL59898.1| unknown protein [Arabidopsis thaliana] gi|20465651|gb|AAM20294.1| unknown protein [Arabidopsis thaliana] gi|28317385|tpe|CAD29862.1| TPA: basic leucine zipper transcription factor [Arabidopsis thaliana] gi|332007673|gb|AED95056.1| basic leucine zipper transcription factor [Arabidopsis thaliana]

 Score =  176 bits (445), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/211 (51%), Positives = 138/211 (65%), Gaps = 34/211 (16%)

Query: 1   MTVDGILRNVYNTTTASTTDATLLDAQITLVD-----------TNSNLIANENDQNGAVS 49
           MTV+GIL + + +   + T+++LLDA I L+D           T S+++   +   G  +
Sbjct: 59  MTVEGILHDTFASDPPAPTESSLLDASINLMDASPAPMEITTTTASDVV---DHGGGTET 115

Query: 50  AGAMKSVDDVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAGAVED----SAGGDDMDVKA 105
               KSVD++WRE+VSGE K MKEE  +E+MTLEDFLAKA AVED    +A  +D+DVK 
Sbjct: 116 TRGGKSVDEIWREMVSGEGKGMKEETSEEIMTLEDFLAKA-AVEDETAVTASAEDLDVKI 174

Query: 106 FANVTERLSGGVYAFDQPAAA-SPFQ----VEGAIVGFGNGVEVVGG--RGKRGRVMLEP 158
              VT       Y FD  A   +PFQ    VEG+IV FGNG++V GG  RGKR RVM+EP
Sbjct: 175 --PVTN------YGFDHSAPPHNPFQMIDKVEGSIVAFGNGLDVYGGGARGKRARVMVEP 226

Query: 159 LDKAAQQRQRRMIKNRESAARSRERKQVTKL 189
           LDKAA QRQRRMIKNRESAARSRERKQ  ++
Sbjct: 227 LDKAAAQRQRRMIKNRESAARSRERKQAYQV 257

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297791457|ref|XP_002863613.1| hypothetical protein ARALYDRAFT_494588 [Arabidopsis lyrata subsp. lyrata] gi|297309448|gb|EFH39872.1| hypothetical protein ARALYDRAFT_494588 [Arabidopsis lyrata subsp. lyrata]

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/210 (49%), Positives = 134/210 (63%), Gaps = 30/210 (14%)

Query: 1   MTVDGILRNVYNTTTASTTDATLLDAQITLVD----------TNSNLIANENDQNGAVSA 50
           MTV+GIL + + +   + T+++LLDA ITL+D          T S+++  ++D  G  + 
Sbjct: 51  MTVEGILHDTFASDPPAPTESSLLDASITLMDASPAPMEITTTVSDVV--DHDGGGTETT 108

Query: 51  GAMKSVDDVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMDVKAFANVT 110
              KSVD+VWRE+VSG  K MKEE  +E+MTLEDFLAKA   +++A  +D+DVK      
Sbjct: 109 RGGKSVDEVWREMVSGVGKGMKEETQEEIMTLEDFLAKAAVEDETATAEDLDVKIPPTTN 168

Query: 111 ERLSGGVYAFDQPAAAS-PFQ----VEGAIVGFGNGVEVVGGRG------KRGRVMLEPL 159
                  Y FD  A    PFQ    VEG+IV FGNG++V GG G      KR RVM+EPL
Sbjct: 169 -------YGFDYSAPPHNPFQMIDKVEGSIVAFGNGLDVYGGGGSGGVRGKRARVMVEPL 221

Query: 160 DKAAQQRQRRMIKNRESAARSRERKQVTKL 189
           DKAA QRQRRMIKNRESAARSRERKQ  ++
Sbjct: 222 DKAAAQRQRRMIKNRESAARSRERKQAYQV 251

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566614|ref|XP_002524291.1| transcription factor, putative [Ricinus communis] gi|223536382|gb|EEF38031.1| transcription factor, putative [Ricinus communis]

 Score =  162 bits (409), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/210 (51%), Positives = 134/210 (63%), Gaps = 22/210 (10%)

Query: 1   MTVDGILRN-------VYNTTTA--STTDATLLDAQITLVDTNSNLIANENDQNGAVSAG 51
           MTVDGI+R+       +Y+T     +T D+TLLDAQITL+D  +     + + + A  + 
Sbjct: 60  MTVDGIIRSSNNNNSNIYSTPAPIPTTADSTLLDAQITLIDNPTPPPPPQMETSTAAISQ 119

Query: 52  AMKSVDDVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAGAVEDSAGGDDMDVKAFANVTE 111
           + K+VDDVWREIVSG +KEMKEE  DEMMTLEDFLAKAGAV+     D  D         
Sbjct: 120 SNKTVDDVWREIVSG-RKEMKEEQPDEMMTLEDFLAKAGAVDVVEDEDLDDEVKMPLPLP 178

Query: 112 RLS--GGVYAFDQPA----AASPFQ----VEGAIVGFGNGVEVVGGRGKRGR--VMLEPL 159
                GG+YAFD P     A++ FQ    VEG+IV FGNG    GG   +    V++EPL
Sbjct: 179 SPLSSGGMYAFDSPVSVPQASNAFQILDKVEGSIVAFGNGGNTGGGGRGKRGRSVVMEPL 238

Query: 160 DKAAQQRQRRMIKNRESAARSRERKQVTKL 189
           DKAAQQRQRRMIKNRESAARSRERKQ  ++
Sbjct: 239 DKAAQQRQRRMIKNRESAARSRERKQAYQV 268

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	192
TAIR|locus:2172507	315	AT5G44080 [Arabidopsis thalian	0.916	0.558	0.441	9.4e-27
TAIR|locus:2024224	270	GBF4 "G-box binding factor 4"	0.666	0.474	0.527	1.2e-24
TAIR|locus:2103665	297	AREB3 "ABA-responsive element	0.151	0.097	0.689	3.7e-09
TAIR|locus:2049425	442	ABI5 "ABA INSENSITIVE 5" [Arab	0.145	0.063	0.75	2.1e-07
TAIR|locus:2118969	454	ABF3 "AT4G34000" [Arabidopsis	0.140	0.059	0.740	2.7e-07
UNIPROTKB|Q8RZ35	388	P0489B03.11 "Putative ABA resp	0.135	0.067	0.769	4.3e-07
UNIPROTKB|Q6ZDF3	318	TRAB1 "bZIP transcription fact	0.140	0.084	0.740	5.4e-07
TAIR|locus:2063275	262	EEL "AT2G41070" [Arabidopsis t	0.151	0.110	0.689	5.9e-07
TAIR|locus:2076018	331	DPBF2 "AT3G44460" [Arabidopsis	0.145	0.084	0.678	1.1e-05

TAIR|locus:2172507 AT5G44080 [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 90/204 (44%), Positives = 110/204 (53%)

Query:     1 MTVDGILRNVYNXXXXXXXXXXXXXXQITLVDTN------SNLIANEN-DQNGAV-SAGA 52
             MTV+GIL + +                I L+D +      +   A++  D  G   +   
Sbjct:    59 MTVEGILHDTFASDPPAPTESSLLDASINLMDASPAPMEITTTTASDVVDHGGGTETTRG 118

Query:    53 MKSVDDVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAGAVED----SAGGDDMDVKAFAN 108
              KSVD++WRE+VSGE K MKEE  +E+MTLEDFLAKA AVED    +A  +D+DVK    
Sbjct:   119 GKSVDEIWREMVSGEGKGMKEETSEEIMTLEDFLAKA-AVEDETAVTASAEDLDVKI--P 175

Query:   109 VTERLSGGVYAFDQPAAA-SPFQ----VEGAIXXXXXXXXXXXXXXXXXXX--MLEPLDK 161
             VT       Y FD  A   +PFQ    VEG+I                     M+EPLDK
Sbjct:   176 VTN------YGFDHSAPPHNPFQMIDKVEGSIVAFGNGLDVYGGGARGKRARVMVEPLDK 229

Query:   162 AAQQRQRRMIKNRESAARSRERKQ 185
             AA QRQRRMIKNRESAARSRERKQ
Sbjct:   230 AAAQRQRRMIKNRESAARSRERKQ 253

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2024224 GBF4 "G-box binding factor 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 78/148 (52%), Positives = 94/148 (63%)

Query:    43 DQNGAVSAGAMKSVDDVWREIVSGEKKE--MKEEAIDEMMTLEDFLAKAGAVEDSAGGDD 100
             D+N +V+ G  KSVDDVW+EIVSGE+K   MKEE  +++MTLEDFLAKA    D    D+
Sbjct:    77 DRN-SVNNG--KSVDDVWKEIVSGEQKTIMMKEEEPEDIMTLEDFLAKAEM--DEGASDE 131

Query:   101 MDVKAFANVTERLSG-GVYAFDQPAAA-SPFQ-VEGAIXXXXXXXXXXXXXXXXXXXMLE 157
             +DVK     TERL+  G Y FD P    S FQ VEG++                   M+E
Sbjct:   132 IDVKI---PTERLNNDGSYTFDFPMQRHSSFQMVEGSMGGGVTRGKRGRV-------MME 181

Query:   158 PLDKAAQQRQRRMIKNRESAARSRERKQ 185
              +DKAA QRQ+RMIKNRESAARSRERKQ
Sbjct:   182 AMDKAAAQRQKRMIKNRESAARSRERKQ 209

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

TAIR|locus:2103665 AREB3 "ABA-responsive element binding protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 101 (40.6 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
 Identities = 20/29 (68%), Positives = 25/29 (86%)

Query:   157 EPLDKAAQQRQRRMIKNRESAARSRERKQ 185
             E ++K  ++RQ+RMIKNRESAARSR RKQ
Sbjct:   219 EVVEKTVERRQKRMIKNRESAARSRARKQ 247

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2049425 ABI5 "ABA INSENSITIVE 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 108 (43.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
 Identities = 21/28 (75%), Positives = 25/28 (89%)

Query:   158 PLDKAAQQRQRRMIKNRESAARSRERKQ 185
             P++K  ++RQRRMIKNRESAARSR RKQ
Sbjct:   350 PVEKVVERRQRRMIKNRESAARSRARKQ 377

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IMP;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0048316 "seed development" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA;IMP

GO:0003677 "DNA binding" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0010200 "response to chitin" evidence=IEP

GO:0009739 "response to gibberellin stimulus" evidence=IEP

GO:0009845 "seed germination" evidence=IEP;RCA

GO:0010187 "negative regulation of seed germination" evidence=IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

TAIR|locus:2118969 ABF3 "AT4G34000" [Arabidopsis thaliana (taxid:3702)]

 Score = 100 (40.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
 Identities = 20/27 (74%), Positives = 24/27 (88%)

Query:   159 LDKAAQQRQRRMIKNRESAARSRERKQ 185
             L+K  ++RQ+RMIKNRESAARSR RKQ
Sbjct:   368 LEKVIERRQKRMIKNRESAARSRARKQ 394

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0000303 "response to superoxide" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0008219 "cell death" evidence=RCA

GO:0009755 "hormone-mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

UNIPROTKB|Q8RZ35 P0489B03.11 "Putative ABA response element binding factor" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 100 (40.3 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
 Identities = 20/26 (76%), Positives = 23/26 (88%)

Query:   160 DKAAQQRQRRMIKNRESAARSRERKQ 185
             +K  ++RQRRMIKNRESAARSR RKQ
Sbjct:   299 EKTVERRQRRMIKNRESAARSRARKQ 324

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005634 "nucleus" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0009409 "response to cold" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009651 "response to salt stress" evidence=IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0010152 "pollen maturation" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

UNIPROTKB|Q6ZDF3 TRAB1 "bZIP transcription factor TRAB1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 101 (40.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
 Identities = 20/27 (74%), Positives = 24/27 (88%)

Query:   159 LDKAAQQRQRRMIKNRESAARSRERKQ 185
             ++K  ++RQRRMIKNRESAARSR RKQ
Sbjct:   226 VEKVVERRQRRMIKNRESAARSRARKQ 252

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

TAIR|locus:2063275 EEL "AT2G41070" [Arabidopsis thaliana (taxid:3702)]

 Score = 100 (40.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
 Identities = 20/29 (68%), Positives = 25/29 (86%)

Query:   157 EPLDKAAQQRQRRMIKNRESAARSRERKQ 185
             E ++K  ++RQ+RMIKNRESAARSR RKQ
Sbjct:   184 EIVEKTVERRQKRMIKNRESAARSRARKQ 212

GO:0003677 "DNA binding" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA;TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0048522 "positive regulation of cellular process" evidence=RCA

TAIR|locus:2076018 DPBF2 "AT3G44460" [Arabidopsis thaliana (taxid:3702)]

 Score = 91 (37.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 19/28 (67%), Positives = 23/28 (82%)

Query:   158 PLDKAAQQRQRRMIKNRESAARSRERKQ 185
             P +   ++RQRRMIKNRESAARSR R+Q
Sbjct:   242 PPEILMERRQRRMIKNRESAARSRARRQ 269

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0033613 "activating transcription factor binding" evidence=IPI

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00031758001 SubName- Full=Chromosome chr18 scaffold_59, whole genome shotgun sequence; (275 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	192
smart00338	65	smart00338, BRLZ, basic region leucin zipper	3e-05
pfam00170	64	pfam00170, bZIP_1, bZIP transcription factor	1e-04

>gnl|CDD|197664 smart00338, BRLZ, basic region leucin zipper

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 13/22 (59%), Positives = 19/22 (86%)

Query: 164 QQRQRRMIKNRESAARSRERKQ 185
           ++R+RR  +NRE+A RSRERK+
Sbjct: 4   EKRRRRRERNREAARRSRERKK 25

Length = 65

>gnl|CDD|201054 pfam00170, bZIP_1, bZIP transcription factor

 Score = 38.5 bits (90), Expect = 1e-04
 Identities = 13/21 (61%), Positives = 17/21 (80%)

Query: 165 QRQRRMIKNRESAARSRERKQ 185
           +R+RR  KNRE+A RSR RK+
Sbjct: 5   KRERRRQKNREAARRSRLRKK 25

The Pfam entry includes the basic region and the leucine zipper region. Length = 64

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	192
KOG4343	655	consensus bZIP transcription factor ATF6 [Transcri	98.25
smart00338	65	BRLZ basic region leucin zipper.	97.51
PF00170	64	bZIP_1: bZIP transcription factor cAMP response el	97.04
PF07716	54	bZIP_2: Basic region leucine zipper; InterPro: IPR	96.82
KOG3584	348	consensus cAMP response element binding protein an	96.65
KOG0709	472	consensus CREB/ATF family transcription factor [Tr	96.02
PF03131	92	bZIP_Maf: bZIP Maf transcription factor; InterPro:	92.41

>KOG4343 consensus bZIP transcription factor ATF6 [Transcription]

Probab=98.25  E-value=6.2e-07  Score=86.36  Aligned_cols=32  Identities=50%  Similarity=0.590  Sum_probs=29.9

Q ss_pred             hhhHHHHHHHHHhhhhhHHHHHHHHHHhhhhh
Q 029519          158 PLDKAAQQRQRRMIKNRESAARSRERKQVTKL  189 (192)
Q Consensus       158 ~~~~~~~r~~~r~~~nresa~rsr~rkq~~~~  189 (192)
                      .+|..+-+|+.|||||||||+.||+||++|.+
T Consensus       274 ~~d~kv~krqQRmIKNResA~~SRkKKKEy~~  305 (655)
T KOG4343|consen  274 GSDIKVLKRQQRMIKNRESACQSRKKKKEYML  305 (655)
T ss_pred             ccCHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999986

>smart00338 BRLZ basic region leucin zipper

Probab=97.51  E-value=8.8e-05  Score=51.87  Aligned_cols=27  Identities=48%  Similarity=0.636  Sum_probs=24.6

Q ss_pred             HHHHHHHhhhhhHHHHHHHHHHhhhhh
Q 029519          163 AQQRQRRMIKNRESAARSRERKQVTKL  189 (192)
Q Consensus       163 ~~r~~~r~~~nresa~rsr~rkq~~~~  189 (192)
                      ++++.+|+++||++|+++|.||++|+.
T Consensus         3 ~~k~~rR~~rNR~aA~~~R~rKk~~~~   29 (65)
T smart00338        3 DEKRRRRRERNREAARRSRERKKAEIE   29 (65)
T ss_pred             cHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            468899999999999999999999974

>PF00170 bZIP_1: bZIP transcription factor cAMP response element binding (CREB) protein signature fos transforming protein signature jun transcription factor signature; InterPro: IPR011616 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotic are proteins that contain a basic region mediating sequence-specific DNA-binding followed by a leucine zipper region (see IPR002158 from INTERPRO) required for dimerization

Probab=97.04  E-value=0.00047  Score=48.11  Aligned_cols=26  Identities=46%  Similarity=0.589  Sum_probs=23.4

Q ss_pred             HHHHHHhhhhhHHHHHHHHHHhhhhh
Q 029519          164 QQRQRRMIKNRESAARSRERKQVTKL  189 (192)
Q Consensus       164 ~r~~~r~~~nresa~rsr~rkq~~~~  189 (192)
                      .++.+|+++||++|+++|.||++|+-
T Consensus         4 ~k~~~rr~rNR~AAr~~R~RKk~~~~   29 (64)
T PF00170_consen    4 DKRERRRERNREAARRSRQRKKQYIE   29 (64)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence            47899999999999999999999974

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2H7H_B 2OQQ_B 1S9K_E 1JNM_A 1JUN_A 1FOS_H 1A02_J 1T2K_C 1CI6_A 1DH3_C ....

>PF07716 bZIP_2: Basic region leucine zipper; InterPro: IPR011700 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotes are proteins that contain a basic region mediating sequence-specific DNA-binding, followed by a leucine zipper region (see IPR002158 from INTERPRO), which is required for dimerization

Probab=96.82  E-value=0.0012  Score=44.96  Aligned_cols=26  Identities=46%  Similarity=0.694  Sum_probs=22.8

Q ss_pred             HHHHHHHhhhhhHHHHHHHHHHhhhhh
Q 029519          163 AQQRQRRMIKNRESAARSRERKQVTKL  189 (192)
Q Consensus       163 ~~r~~~r~~~nresa~rsr~rkq~~~~  189 (192)
                      .+.+.+|. +||++|++||.||++|+.
T Consensus         3 ~~~~~rR~-rNr~AA~r~R~rkk~~~~   28 (54)
T PF07716_consen    3 EEKRERRE-RNREAARRSRQRKKQREE   28 (54)
T ss_dssp             HHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence            46778888 999999999999999864

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1NWQ_A 1H89_B 1H88_A 1GTW_B 2E43_A 1IO4_A 1GU4_B 2E42_A 1H8A_B 1GU5_B ....

>KOG3584 consensus cAMP response element binding protein and related transcription factors [Transcription]

Probab=96.65  E-value=0.0015  Score=59.55  Aligned_cols=33  Identities=33%  Similarity=0.572  Sum_probs=29.7

Q ss_pred             hhhHHHHHHHHHhhhhhHHHHHHHHHHhhhhhh
Q 029519          158 PLDKAAQQRQRRMIKNRESAARSRERKQVTKLC  190 (192)
Q Consensus       158 ~~~~~~~r~~~r~~~nresa~rsr~rkq~~~~~  190 (192)
                      ..|....+|+-|++||||-|++=|.||++|.-|
T Consensus       284 ~aee~trKRevRLmKNREAARECRRKKKEYVKC  316 (348)
T KOG3584|consen  284 GAEEATRKREVRLMKNREAARECRRKKKEYVKC  316 (348)
T ss_pred             cchhhhhHHHHHHHhhHHHHHHHHHhHhHHHHH
Confidence            446677789999999999999999999999988

>KOG0709 consensus CREB/ATF family transcription factor [Transcription]

Probab=96.02  E-value=0.0059  Score=58.32  Aligned_cols=31  Identities=32%  Similarity=0.375  Sum_probs=27.4

Q ss_pred             hHHHHHHHHHhhhhhHHHHHHHHHHhhhhhh
Q 029519          160 DKAAQQRQRRMIKNRESAARSRERKQVTKLC  190 (192)
Q Consensus       160 ~~~~~r~~~r~~~nresa~rsr~rkq~~~~~  190 (192)
                      +..+.+|-+|+|+|++||..||+|||+|.=|
T Consensus       246 EEriLKrvRRKIrNK~SAQESRrkKkeYid~  276 (472)
T KOG0709|consen  246 EERILKRVRRKIRNKRSAQESRRKKKEYIDG  276 (472)
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHHhHhhHHHH
Confidence            5567788999999999999999999999754

>PF03131 bZIP_Maf: bZIP Maf transcription factor; InterPro: IPR004826 There are several different types of Maf transcription factors with different roles in the cell

Probab=92.41  E-value=0.21  Score=37.30  Aligned_cols=29  Identities=34%  Similarity=0.385  Sum_probs=24.2

Q ss_pred             hHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 029519          160 DKAAQQRQRRMIKNRESAARSRERKQVTK  188 (192)
Q Consensus       160 ~~~~~r~~~r~~~nresa~rsr~rkq~~~  188 (192)
                      +...-+..+|-+|||..|+++|.||..++
T Consensus        25 q~~~lK~~RRr~KNR~~A~~cR~rk~~~~   53 (92)
T PF03131_consen   25 QIAELKQRRRRLKNRGYAQNCRKRKLDQI   53 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45555778888999999999999998765

MafG and MafH are small Mafs which lack a putative transactivation domain. They behave as transcriptional repressors when they dimerize among themselves. However they also serve as transcriptional activators by dimerizing with other (usually larger) basic-zipper proteins and recruiting them to specific DNA-binding sites. Maf transcription factors contain a conserved basic region leucine zipper (bZIP) domain, which mediates their dimerization and DNA binding property. Neural retina-specific leucine zipper proteins also belong to this family. Together with the basic region, the Maf extended homology region (EHR), conserved only within the Maf family, defines the DNA binding specific to Mafs. This structure enables Mafs to make a broader area of contact with DNA and to recognise longer DNA sequences. In particular, the two residues at the beginning of helix H2 are positioned to recognise the flanking region []. Small Maf proteins heterodimerize with Fos and may act as competitive repressors of the NF2-E2 transcription factor. In mouse, Maf1 may play an early role in axial patterning. Defects in these proteins are a cause of autosomal dominant retinitis pigmentosa. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 2KZ5_A 3A5T_A 1K1V_A 1SKN_P 2WT7_B 2WTY_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	192
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	3e-07
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	8e-05

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1 Length = 55

 Score = 44.7 bits (106), Expect = 3e-07
 Identities = 10/21 (47%), Positives = 17/21 (80%)

Query: 165 QRQRRMIKNRESAARSRERKQ 185
           +R+ R++KNRE+A  SR +K+
Sbjct: 1   KREVRLMKNREAARESRRKKK 21

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1 Length = 61

 Score = 38.5 bits (90), Expect = 8e-05
 Identities = 7/21 (33%), Positives = 18/21 (85%)

Query: 165 QRQRRMIKNRESAARSRERKQ 185
           +R++ + +NR +A+RSR++++
Sbjct: 1   KRRKFLERNRAAASRSRQKRK 21

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	192
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	98.61
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	97.82
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	97.22
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	97.17
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	96.23
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	94.63
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	92.62
1gd2_E	70	Transcription factor PAP1; basic leucine zipper, p	83.88
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	82.01
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	81.12

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1

Probab=98.61  E-value=1.5e-08  Score=69.41  Aligned_cols=26  Identities=38%  Similarity=0.535  Sum_probs=23.7

Q ss_pred             HHHHHhhhhhHHHHHHHHHHhhhhhh
Q 029519          165 QRQRRMIKNRESAARSRERKQVTKLC  190 (192)
Q Consensus       165 r~~~r~~~nresa~rsr~rkq~~~~~  190 (192)
                      +|++|||+|||||++||.|||+|+-+
T Consensus         1 kr~rR~~~NResA~rSR~RKk~~~~~   26 (55)
T 1dh3_A            1 KREVRLMKNREAARESRRKKKEYVKS   26 (55)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHhhHHHHHHHHHHHHHHHHH
Confidence            47899999999999999999999853

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D

Probab=97.82  E-value=8.9e-06  Score=56.48  Aligned_cols=27  Identities=26%  Similarity=0.373  Sum_probs=25.0

Q ss_pred             HHHHHHhhhhhHHHHHHHHHHhhhhhh
Q 029519          164 QQRQRRMIKNRESAARSRERKQVTKLC  190 (192)
Q Consensus       164 ~r~~~r~~~nresa~rsr~rkq~~~~~  190 (192)
                      |+|++|+++||++|++||.||++|+.+
T Consensus         1 Ekr~rrrerNR~AA~rcR~rKk~~~~~   27 (63)
T 2wt7_A            1 EKRRIRRERNKMAAAKCRNRRRELTDT   27 (63)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            579999999999999999999999865

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1

Probab=97.22  E-value=0.00016  Score=49.54  Aligned_cols=26  Identities=31%  Similarity=0.514  Sum_probs=23.7

Q ss_pred             HHHHHhhhhhHHHHHHHHHHhhhhhh
Q 029519          165 QRQRRMIKNRESAARSRERKQVTKLC  190 (192)
Q Consensus       165 r~~~r~~~nresa~rsr~rkq~~~~~  190 (192)
                      +|++|+++||++|.+||.||++|+.+
T Consensus         1 kR~~r~erNr~AA~k~R~rKk~~~~~   26 (61)
T 1t2k_D            1 KRRKFLERNRAAASRSRQKRKVWVQS   26 (61)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            47899999999999999999999864

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D

Probab=97.17  E-value=0.00018  Score=50.24  Aligned_cols=19  Identities=42%  Similarity=0.407  Sum_probs=17.0

Q ss_pred             hhhHHHHHHHHHHhhhhhh
Q 029519          172 KNRESAARSRERKQVTKLC  190 (192)
Q Consensus       172 ~nresa~rsr~rkq~~~~~  190 (192)
                      +|||+|+|||.|||+|+-+
T Consensus        16 rNreAArrsR~RK~~~~~~   34 (63)
T 2dgc_A           16 RNTEAARRSRARKLQRMKQ   34 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHH
Confidence            3999999999999999753

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A

Probab=96.23  E-value=0.0032  Score=43.16  Aligned_cols=25  Identities=32%  Similarity=0.426  Sum_probs=21.1

Q ss_pred             HHHHhhhhhHHHHHHHHHHhhhhhh
Q 029519          166 RQRRMIKNRESAARSRERKQVTKLC  190 (192)
Q Consensus       166 ~~~r~~~nresa~rsr~rkq~~~~~  190 (192)
                      +++|..+||++|++||.||++|+.+
T Consensus         2 ~errr~rNr~AA~k~R~rKk~~~~~   26 (62)
T 1jnm_A            2 AERKRMRNRIAASKSRKRKLERIAR   26 (62)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            4566778999999999999999753

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}

Probab=94.63  E-value=0.034  Score=42.64  Aligned_cols=31  Identities=29%  Similarity=0.370  Sum_probs=26.5

Q ss_pred             hhhHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 029519          158 PLDKAAQQRQRRMIKNRESAARSRERKQVTK  188 (192)
Q Consensus       158 ~~~~~~~r~~~r~~~nresa~rsr~rkq~~~  188 (192)
                      ..+...-+.++|..|||++|+++|.||++..
T Consensus        30 ~~e~~~lK~~RR~lKNR~yAq~CR~rk~~~~   60 (107)
T 3a5t_A           30 KEEIIQLKQRRRTLKNRGYAASCRVKRVTQK   60 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence            4466777889999999999999999998754

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1

Probab=92.62  E-value=0.052  Score=37.46  Aligned_cols=26  Identities=23%  Similarity=0.480  Sum_probs=18.2

Q ss_pred             HHHHHhhhhhHHHHHHHHHHhhhhhh
Q 029519          165 QRQRRMIKNRESAARSRERKQVTKLC  190 (192)
Q Consensus       165 r~~~r~~~nresa~rsr~rkq~~~~~  190 (192)
                      +|.+++..||.+|+|+|.||+++.-+
T Consensus         2 k~~rKr~rNr~AA~R~R~KKk~~~~~   27 (63)
T 1ci6_A            2 KKLKKMEQNKTAATRYRQKKRAEQEA   27 (63)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHH
T ss_pred             chHhHHHHhHHHHHHHHHHHHHHHHH
Confidence            57888999999999999999988754

>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1

Probab=83.88  E-value=0.77  Score=32.53  Aligned_cols=22  Identities=27%  Similarity=0.342  Sum_probs=20.4

Q ss_pred             HHHhhhhhHHHHHHHHHHhhhh
Q 029519          167 QRRMIKNRESAARSRERKQVTK  188 (192)
Q Consensus       167 ~~r~~~nresa~rsr~rkq~~~  188 (192)
                      .||...||++++..|.||++|+
T Consensus        10 ~kR~~qNR~AQRafReRK~~~i   31 (70)
T 1gd2_E           10 SKRKAQNRAAQRAFRKRKEDHL   31 (70)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH
Confidence            5788999999999999999996

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A

Probab=82.01  E-value=0.8  Score=33.06  Aligned_cols=24  Identities=17%  Similarity=0.311  Sum_probs=18.0

Q ss_pred             HHHHHhhhhhHHHHHHHHHHhhhh
Q 029519          165 QRQRRMIKNRESAARSRERKQVTK  188 (192)
Q Consensus       165 r~~~r~~~nresa~rsr~rkq~~~  188 (192)
                      ....|-.+|.+.|+|||.+++...
T Consensus        15 ~Y~~rR~rNN~AakrSR~krk~r~   38 (78)
T 1gu4_A           15 EYKIRRERNNIAVRKSRDKAKMRN   38 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHH
Confidence            333345789999999999987654

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1

Probab=81.12  E-value=0.91  Score=33.41  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=21.0

Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHhhhhh
Q 029519          161 KAAQQRQRRMIKNRESAARSRERKQVTKL  189 (192)
Q Consensus       161 ~~~~r~~~r~~~nresa~rsr~rkq~~~~  189 (192)
                      +.++....|-.+|.+.|+|||.+++....
T Consensus        11 k~d~~Y~~rR~rNN~AarrSR~krk~r~~   39 (87)
T 1hjb_A           11 KHSDEYKIRRERNNIAVRKSRDKAKMRNL   39 (87)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            33344445557899999999999887654

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00