Citrus Sinensis ID: 029542

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190--
MSNHLGTAGSNNSGGPPVALNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYIVESLRQ
ccccccccccccccccccccEEEEEEccccccEEcccccccccccccccEEEEEEcccccccccccccccccccccccccccEEEEEcccccccccEEEEEEEEEEEEEEccccccEEEEEEccccccccccccccccHHHHHHHHHHHHHccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHcc
cccccccccccccccccccHHHHHHHcccccccccccccccccccccccEEEEEEEEcccccccccEEEEccccccccccccEEEEEcccccccccEEEEEEEEEEEEEEcccEEEEEEEEEcccHHHcccccHHHccHHHHHHHHHHHHHccHHHHHHEEEcccccHHHHHHHHHHHHHHHHHHHHHHHcc
msnhlgtagsnnsggppvaLNERILSsmshrsvaahpwhdleigpgapavcncvdrvlyssvvyphnygfiprticedsdpmDVLVLMqepvlpgsflrcraiglmpmidqgekddKIIAvcaddpefrhykdikelpphRLAEIRRFFEDYKknenkkvdvedflPAEAAIEAIKYSMDLYASYIVESLRQ
msnhlgtagsnnsggppVALNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPmidqgekdDKIIAVCADDPEFrhykdikelpphrLAEIRRFFEdykknenkkvdvedflPAEAAIEAIKYSMDLYASYIVESLRQ
MSNHLGTAGSNNSGGPPVALNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYIVESLRQ
********************************VAAHPWHDLEIGPGAPAVCNCVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYIV*****
*******************LNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYIV*****
*************GGPPVALNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYIVESLRQ
*****************VAL**RILSSMSHRSVAAHPWHDLEIGPGAPAVCNCVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYIVESLR*
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MSNHLGTAGSNNSGGPPVALNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYIVESLRQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query192 2.2.26 [Sep-21-2011]
Q0DYB1214 Soluble inorganic pyropho yes no 0.921 0.827 0.758 1e-83
A2X8Q3214 Soluble inorganic pyropho N/A no 0.921 0.827 0.758 1e-83
P21216218 Soluble inorganic pyropho yes no 0.921 0.811 0.758 7e-83
O48556214 Soluble inorganic pyropho N/A no 1.0 0.897 0.705 1e-81
Q43187211 Soluble inorganic pyropho N/A no 0.901 0.819 0.743 1e-79
O23979215 Soluble inorganic pyropho N/A no 0.963 0.860 0.674 3e-73
Q949J1192 Soluble inorganic pyropho N/A no 0.848 0.848 0.559 2e-54
O26363176 Inorganic pyrophosphatase yes no 0.786 0.857 0.456 3e-35
Q8EZ21178 Inorganic pyrophosphatase yes no 0.770 0.831 0.452 6e-35
Q72MG4178 Inorganic pyrophosphatase yes no 0.770 0.831 0.452 6e-35
>sp|Q0DYB1|IPYR_ORYSJ Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1 Back     alignment and function desciption
 Score =  308 bits (789), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 151/199 (75%), Positives = 163/199 (81%), Gaps = 22/199 (11%)

Query: 16  PPVALNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCV--------------------- 54
           PP ALNERILSSMS + VAAHPWHDLEIGPGAPAV NCV                     
Sbjct: 16  PPAALNERILSSMSQKHVAAHPWHDLEIGPGAPAVFNCVVEIPRGSKVKYELDKATGLIK 75

Query: 55  -DRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGE 113
            DRVLYSSVVYPHNYGFIPRT+CED DPMDVLVLMQE V+PG FLR RAIGLMPMIDQGE
Sbjct: 76  VDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQEQVVPGCFLRARAIGLMPMIDQGE 135

Query: 114 KDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIE 173
           KDDKIIAVCADDPE+RH++DIKE+PPHRL EIRRFFEDYKKNENK+V V +FLPAE AI 
Sbjct: 136 KDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFEDYKKNENKEVAVNEFLPAEDAIN 195

Query: 174 AIKYSMDLYASYIVESLRQ 192
           AIKYSMDLY +YI+ESLR+
Sbjct: 196 AIKYSMDLYGAYIIESLRK 214

Oryza sativa subsp. japonica (taxid: 39947)
EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: 1
>sp|A2X8Q3|IPYR_ORYSI Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. indica GN=IPP PE=2 SV=1 Back     alignment and function description
>sp|P21216|IPYR2_ARATH Soluble inorganic pyrophosphatase 2 OS=Arabidopsis thaliana GN=PPA2 PE=2 SV=2 Back     alignment and function description
>sp|O48556|IPYR_MAIZE Soluble inorganic pyrophosphatase OS=Zea mays GN=IPP PE=2 SV=1 Back     alignment and function description
>sp|Q43187|IPYR_SOLTU Soluble inorganic pyrophosphatase OS=Solanum tuberosum GN=PPA PE=2 SV=1 Back     alignment and function description
>sp|O23979|IPYR_HORVD Soluble inorganic pyrophosphatase OS=Hordeum vulgare var. distichum GN=IPP PE=2 SV=1 Back     alignment and function description
>sp|Q949J1|IPYR2_CHLRE Soluble inorganic pyrophosphatase 2 OS=Chlamydomonas reinhardtii GN=ppa2 PE=1 SV=1 Back     alignment and function description
>sp|O26363|IPYR_METTH Inorganic pyrophosphatase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=ppa PE=3 SV=1 Back     alignment and function description
>sp|Q8EZ21|IPYR_LEPIN Inorganic pyrophosphatase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) GN=ppa PE=3 SV=1 Back     alignment and function description
>sp|Q72MG4|IPYR_LEPIC Inorganic pyrophosphatase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) GN=ppa PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query192
449451549239 PREDICTED: soluble inorganic pyrophospha 1.0 0.803 0.794 3e-92
359476682215 PREDICTED: soluble inorganic pyrophospha 1.0 0.893 0.790 5e-91
388515711216 unknown [Lotus japonicus] 0.994 0.884 0.788 6e-91
255561090212 inorganic pyrophosphatase, putative [Ric 0.989 0.896 0.803 6e-91
118484220220 unknown [Populus trichocarpa] 0.994 0.868 0.789 2e-90
224094817213 predicted protein [Populus trichocarpa] 0.994 0.896 0.789 3e-90
118489670212 unknown [Populus trichocarpa x Populus d 0.968 0.877 0.799 4e-89
351727729213 uncharacterized protein LOC100306258 [Gl 0.994 0.896 0.775 3e-88
388504010216 unknown [Medicago truncatula] 0.994 0.884 0.766 5e-88
357483543213 Soluble inorganic pyrophosphatase [Medic 0.994 0.896 0.766 5e-88
>gi|449451549|ref|XP_004143524.1| PREDICTED: soluble inorganic pyrophosphatase-like [Cucumis sativus] gi|449522764|ref|XP_004168396.1| PREDICTED: soluble inorganic pyrophosphatase-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  342 bits (878), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 170/214 (79%), Positives = 177/214 (82%), Gaps = 22/214 (10%)

Query: 1   MSNHLGTAGSNNSGGPPVALNERILSSMSHRSVAAHPWHDLEIGPGAPAVCNCV------ 54
           M N  G   S N G P + LNERILSS+S RSVAAHPWHDLEIGPGAP+V NCV      
Sbjct: 26  MENSAGGGSSANMGFPRIRLNERILSSLSRRSVAAHPWHDLEIGPGAPSVFNCVVEIGKG 85

Query: 55  ----------------DRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFL 98
                           DRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFL
Sbjct: 86  SKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFL 145

Query: 99  RCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENK 158
           R RAIGLMPMIDQGE+DDKIIAVCADDPEFRHY DIKE+PPHRLAEIRRFFEDYKKNENK
Sbjct: 146 RARAIGLMPMIDQGERDDKIIAVCADDPEFRHYTDIKEIPPHRLAEIRRFFEDYKKNENK 205

Query: 159 KVDVEDFLPAEAAIEAIKYSMDLYASYIVESLRQ 192
           KVDVEDFLPAEAAI+AIKYSMDLYA+YIVESLRQ
Sbjct: 206 KVDVEDFLPAEAAIDAIKYSMDLYAAYIVESLRQ 239

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359476682|ref|XP_002264695.2| PREDICTED: soluble inorganic pyrophosphatase-like [Vitis vinifera] gi|297735129|emb|CBI17491.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|388515711|gb|AFK45917.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|255561090|ref|XP_002521557.1| inorganic pyrophosphatase, putative [Ricinus communis] gi|223539235|gb|EEF40828.1| inorganic pyrophosphatase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|118484220|gb|ABK93990.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224094817|ref|XP_002310249.1| predicted protein [Populus trichocarpa] gi|222853152|gb|EEE90699.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118489670|gb|ABK96636.1| unknown [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|351727729|ref|NP_001236147.1| uncharacterized protein LOC100306258 [Glycine max] gi|255628027|gb|ACU14358.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388504010|gb|AFK40071.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357483543|ref|XP_003612058.1| Soluble inorganic pyrophosphatase [Medicago truncatula] gi|355513393|gb|AES95016.1| Soluble inorganic pyrophosphatase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query192
TAIR|locus:2062195218 PPa2 "pyrophosphorylase 2" [Ar 0.723 0.637 0.899 1.7e-78
TAIR|locus:2084066216 PPa4 "pyrophosphorylase 4" [Ar 0.723 0.643 0.820 7.5e-78
TAIR|locus:2200965212 PPa1 "pyrophosphorylase 1" [Ar 0.723 0.655 0.820 2e-77
TAIR|locus:2041424216 PPa3 "pyrophosphorylase 3" [Ar 0.723 0.643 0.827 7.5e-76
TAIR|locus:2116997216 PPa5 "pyrophosphorylase 5" [Ar 0.723 0.643 0.791 1.6e-73
UNIPROTKB|Q949J1192 ppa2 "Soluble inorganic pyroph 0.718 0.718 0.661 8.8e-55
TIGR_CMR|DET_0367211 DET_0367 "inorganic pyrophosph 0.666 0.606 0.429 4.2e-24
TIGR_CMR|CJE_0741172 CJE_0741 "inorganic pyrophosph 0.671 0.75 0.416 5.5e-22
UNIPROTKB|P65746162 ppa "Inorganic pyrophosphatase 0.666 0.790 0.396 2.4e-21
UNIPROTKB|P0A7A9176 ppa [Escherichia coli K-12 (ta 0.661 0.721 0.423 1.3e-20
TAIR|locus:2062195 PPa2 "pyrophosphorylase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 658 (236.7 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
 Identities = 125/139 (89%), Positives = 132/139 (94%)

Query:    54 VDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGE 113
             VDRVLYSS+VYPHNYGFIPRTICEDSDPMDVLVLMQEPVL GSFLR RAIGLMPMIDQGE
Sbjct:    80 VDRVLYSSIVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLTGSFLRARAIGLMPMIDQGE 139

Query:   114 KDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIE 173
             KDDKIIAVCADDPEFRHY+DIKELPPHRLAEIRRFFEDYKKNENKKVDVE FLPA+AAI+
Sbjct:   140 KDDKIIAVCADDPEFRHYRDIKELPPHRLAEIRRFFEDYKKNENKKVDVEAFLPAQAAID 199

Query:   174 AIKYSMDLYASYIVESLRQ 192
             AIK SMDLYA+YI   L++
Sbjct:   200 AIKDSMDLYAAYIKAGLQR 218
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0004427 "inorganic diphosphatase activity" evidence=IEA;NAS
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0006796 "phosphate-containing compound metabolic process" evidence=IEA
GO:0008152 "metabolic process" evidence=ISS
GO:0016020 "membrane" evidence=ISS
GO:0016462 "pyrophosphatase activity" evidence=ISS
TAIR|locus:2084066 PPa4 "pyrophosphorylase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200965 PPa1 "pyrophosphorylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041424 PPa3 "pyrophosphorylase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116997 PPa5 "pyrophosphorylase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q949J1 ppa2 "Soluble inorganic pyrophosphatase 2" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0367 DET_0367 "inorganic pyrophosphatase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_0741 CJE_0741 "inorganic pyrophosphatase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
UNIPROTKB|P65746 ppa "Inorganic pyrophosphatase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
UNIPROTKB|P0A7A9 ppa [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q43187IPYR_SOLTU3, ., 6, ., 1, ., 10.74350.90100.8199N/Ano
O48556IPYR_MAIZE3, ., 6, ., 1, ., 10.70561.00.8971N/Ano
P21216IPYR2_ARATH3, ., 6, ., 1, ., 10.75870.92180.8119yesno
O23979IPYR_HORVD3, ., 6, ., 1, ., 10.67460.96350.8604N/Ano
Q0DYB1IPYR_ORYSJ3, ., 6, ., 1, ., 10.75870.92180.8271yesno
Q949J1IPYR2_CHLRE3, ., 6, ., 1, ., 10.55910.84890.8489N/Ano
A2X8Q3IPYR_ORYSI3, ., 6, ., 1, ., 10.75870.92180.8271N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.6.1.10.979
3rd Layer3.6.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00024902001
SubName- Full=Chromosome chr4 scaffold_32, whole genome shotgun sequence; (232 aa)
(Vitis vinifera)
Predicted Functional Partners:
atpA
RecName- Full=ATP synthase subunit alpha; Short=ATPase subunit alpha; EC=3.6.3.14; AltName- Ful [...] (507 aa)
     •• 0.919
atp1
RecName- Full=ATP synthase subunit alpha;; Produces ATP from ADP in the presence of a proton gr [...] (495 aa)
     •• 0.918
GSVIVG00029622001
SubName- Full=Chromosome chr9 scaffold_49, whole genome shotgun sequence; (623 aa)
     •• 0.917
GSVIVG00032341001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (629 aa)
     •• 0.916
GSVIVG00036158001
SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (488 aa)
     •• 0.906
GSVIVG00030440001
RecName- Full=ATP synthase subunit beta; EC=3.6.3.14;; Produces ATP from ADP in the presence of [...] (560 aa)
     •• 0.906
GSVIVG00015498001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (509 aa)
     •• 0.905
GSVIVG00017772001
RecName- Full=ATP synthase subunit beta; EC=3.6.3.14;; Produces ATP from ADP in the presence of [...] (554 aa)
     •• 0.905
GSVIVG00038692001
SubName- Full=Chromosome chr18 scaffold_96, whole genome shotgun sequence; (110 aa)
     •  0.899
GSVIVG00038691001
SubName- Full=Chromosome chr18 scaffold_96, whole genome shotgun sequence; (134 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query192
PLN02373188 PLN02373, PLN02373, soluble inorganic pyrophosphat 1e-127
cd00412155 cd00412, pyrophosphatase, Inorganic pyrophosphatas 6e-70
pfam00719156 pfam00719, Pyrophosphatase, Inorganic pyrophosphat 3e-66
COG0221171 COG0221, Ppa, Inorganic pyrophosphatase [Energy pr 3e-51
PRK02230184 PRK02230, PRK02230, inorganic pyrophosphatase; Pro 4e-42
PRK01250176 PRK01250, PRK01250, inorganic pyrophosphatase; Pro 8e-42
PRK00642205 PRK00642, PRK00642, inorganic pyrophosphatase; Pro 2e-33
PLN02707267 PLN02707, PLN02707, Soluble inorganic pyrophosphat 3e-14
>gnl|CDD|178001 PLN02373, PLN02373, soluble inorganic pyrophosphatase Back     alignment and domain information 
 Score =  356 bits (915), Expect = e-127
 Identities = 150/188 (79%), Positives = 158/188 (84%), Gaps = 22/188 (11%)

Query: 27  SMSHRSVAAHPWHDLEIGPGAPAVCNCV----------------------DRVLYSSVVY 64
           SMS RSVAAHPWHDLEIGPGAPA+ NCV                      DRVLYSSVVY
Sbjct: 1   SMSRRSVAAHPWHDLEIGPGAPAIFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVY 60

Query: 65  PHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD 124
           PHNYGFIPRT+CED+DP+DVLVLMQEPVLPG FLR RAIGLMPMIDQGEKDDKIIAVCAD
Sbjct: 61  PHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCAD 120

Query: 125 DPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYAS 184
           DPE+RHY DIKELPPHRLAEIRRFFEDYKKNENK+V V DFLPAEAAIEAI+YSMDLYA 
Sbjct: 121 DPEYRHYTDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPAEAAIEAIQYSMDLYAE 180

Query: 185 YIVESLRQ 192
           YIVESLR+
Sbjct: 181 YIVESLRR 188

Length = 188
>gnl|CDD|238239 cd00412, pyrophosphatase, Inorganic pyrophosphatase Back     alignment and domain information
>gnl|CDD|189686 pfam00719, Pyrophosphatase, Inorganic pyrophosphatase Back     alignment and domain information
>gnl|CDD|223299 COG0221, Ppa, Inorganic pyrophosphatase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|179388 PRK02230, PRK02230, inorganic pyrophosphatase; Provisional Back     alignment and domain information
>gnl|CDD|179262 PRK01250, PRK01250, inorganic pyrophosphatase; Provisional Back     alignment and domain information
>gnl|CDD|179080 PRK00642, PRK00642, inorganic pyrophosphatase; Provisional Back     alignment and domain information
>gnl|CDD|178309 PLN02707, PLN02707, Soluble inorganic pyrophosphatase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 192
PLN02373188 soluble inorganic pyrophosphatase 100.0
PLN02707267 Soluble inorganic pyrophosphatase 100.0
PRK00642205 inorganic pyrophosphatase; Provisional 100.0
PRK01250176 inorganic pyrophosphatase; Provisional 100.0
PRK02230184 inorganic pyrophosphatase; Provisional 100.0
COG0221171 Ppa Inorganic pyrophosphatase [Energy production a 100.0
PF00719156 Pyrophosphatase: Inorganic pyrophosphatase; InterP 100.0
cd00412155 pyrophosphatase Inorganic pyrophosphatase. These e 100.0
KOG1626279 consensus Inorganic pyrophosphatase/Nucleosome rem 100.0
>PLN02373 soluble inorganic pyrophosphatase Back     alignment and domain information 
Probab=100.00  E-value=3e-63  Score=414.14  Aligned_cols=164  Identities=91%  Similarity=1.482  Sum_probs=159.3

Q ss_pred             cCCCCcccccCCCCCCCCCCCCeEEEE----------------------eeeccccccccccCCCCCcccCCCCCcceeE
Q 029542           28 MSHRSVAAHPWHDLEIGPGAPAVCNCV----------------------DRVLYSSVVYPHNYGFIPRTICEDSDPMDVL   85 (192)
Q Consensus        28 ~~~~~~~~spwhdipl~~~~p~~vn~v----------------------DR~l~~~~~yP~NYGfIP~T~~~DgDPLDvl   85 (192)
                      |+++...+||||+||++++.|+.||+|                      ||++++++.||||||||||||++||||||||
T Consensus         2 ~~~~~~~~~~whdi~~~~~~~~~v~vVIEIP~gs~~KyE~dk~~g~i~~Dr~l~~~~~yP~nYGfIP~T~~~DgDPLDvl   81 (188)
T PLN02373          2 MSRRSVAAHPWHDLEIGPGAPAIFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVL   81 (188)
T ss_pred             cccccccCCccccCCCCCCCCCEEEEEEEECCCCCeeEEEccCCCCEEEeeecccCCcCCcccccccccccCCCCccEEE
Confidence            677788999999999999999999999                      8999999999999999999999999999999


Q ss_pred             EecCccCCCeeEEEEEEeEEEEeeeCCCCCceEEEEecCCCCcCCCCCCCCCChhHHHHHHHHHHHhhcCCCceeEeccc
Q 029542           86 VLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDF  165 (192)
Q Consensus        86 vl~~~p~~~G~v~~vrviGvl~miD~ge~D~KiIaV~~~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~legK~v~~~~~  165 (192)
                      ||++.|+.||++++|||||+|+|+|+||.|||||||+++||+|++|+|++|||++++++|+|||++||.+|||++++++|
T Consensus        82 vl~~~~~~~G~vi~~R~iG~l~m~D~ge~D~KiIaV~~~dp~~~~i~dl~Dl~~~~l~~I~~fF~~YK~legK~v~v~g~  161 (188)
T PLN02373         82 VLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYTDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDF  161 (188)
T ss_pred             EecCCCCCCceEEEEEEEEEEEEeeCCCCCCeEEEEECCCcccccCCChHHCCHHHHHHHHHHHHHhcccCCCeEEeCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHhc
Q 029542          166 LPAEAAIEAIKYSMDLYASYIVESLR  191 (192)
Q Consensus       166 ~~~~~A~~vI~~~~~~y~~~~~~~~~  191 (192)
                      .|+++|+++|++|+++|++++.+.++
T Consensus       162 ~~~~~A~~~I~~~~~~y~~~~~~~~~  187 (188)
T PLN02373        162 LPAEAAIEAIQYSMDLYAEYIVESLR  187 (188)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999999999887664

>PLN02707 Soluble inorganic pyrophosphatase Back     alignment and domain information
>PRK00642 inorganic pyrophosphatase; Provisional Back     alignment and domain information
>PRK01250 inorganic pyrophosphatase; Provisional Back     alignment and domain information
>PRK02230 inorganic pyrophosphatase; Provisional Back     alignment and domain information
>COG0221 Ppa Inorganic pyrophosphatase [Energy production and conversion] Back     alignment and domain information
>PF00719 Pyrophosphatase: Inorganic pyrophosphatase; InterPro: IPR008162 Inorganic pyrophosphatase (3 Back     alignment and domain information
>cd00412 pyrophosphatase Inorganic pyrophosphatase Back     alignment and domain information
>KOG1626 consensus Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38 [Energy production and conversion] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query192
1twl_A186 Inorganic Pyrophosphatase From Pyrococcus Furiosus 9e-31
1ude_A195 Crystal Structure Of The Inorganic Pyrophosphatase 5e-30
3i98_A178 X-Ray Crystallographic Structure Of Inorganic Pyrop 2e-27
3q46_A178 Magnesium Activated Inorganic Pyrophosphatase From 2e-27
3r6e_A178 The Structure Of Thermococcus Thioreducens' Inorgan 3e-24
2bqx_A173 Inorganic Pyrophosphatase From The Pathogenic Bacte 1e-22
1qez_A173 Sulfolobus Acidocaldarius Inorganic Pyrophosphatase 2e-22
1ygz_A173 Crystal Structure Of Inorganic Pyrophosphatase From 5e-22
2uxs_A169 2.7a Crystal Structure Of Inorganic Pyrophosphatase 2e-21
1sxv_A172 1.3a Crystal Structure Of Rv3628, Mycobacterium Tub 3e-21
1wcf_A171 1.54 A Crystal Structure Of Rv3628, Mycobacterium T 3e-21
2prd_A174 Crystal Structure Of Inorganic Pyrophosphatase From 1e-20
3sw5_A180 Crystal Structure Of Inorganic Pyrophosphatase From 2e-20
2eip_A175 Inorganic Pyrophosphatase Length = 175 3e-20
3d53_A173 2.2 A Crystal Structure Of Inorganic Pyrophosphatas 4e-20
1obw_A175 Structure Of Inorganic Pyrophosphatase Length = 175 5e-20
1mjz_A175 Structure Of Inorganic Pyrophosphatase Mutant D97n 7e-20
1mjw_A175 Structure Of Inorganic Pyrophosphatase Mutant D42n 7e-20
1mjx_A175 Structure Of Inorganic Pyrophosphatase Mutant D65n 7e-20
1mjy_A175 Structure Of Inorganic Pyrophosphatase Mutant D70n 1e-19
2au7_A175 The R43q Active Site Variant Of E.Coli Inorganic Py 1e-19
4ecp_A167 X-Ray Crystal Structure Of Inorganic Pyrophosphate 2e-19
3d63_A196 Crystal Structure Of Inorganic Pyrophosphatase From 2e-19
3fq3_A197 Crystal Structure Of Inorganic Phosphatase From Bru 2e-19
3lo0_A193 Crystal Structure Of Inorganic Pyrophosphatase From 2e-18
3ld3_A199 Crystal Structure Of Inorganic Phosphatase From Ana 4e-18
3tr4_A178 Structure Of An Inorganic Pyrophosphatase (Ppa) Fro 4e-16
3i4q_A176 Structure Of A Putative Inorganic Pyrophosphatase F 1e-15
2ik0_A286 Yeast Inorganic Pyrophosphatase Variant E48d With M 7e-09
1ypp_A286 Acid Anhydride Hydrolase Length = 286 7e-09
1wgi_A286 Structure Of Inorganic Pyrophosphatase Length = 286 7e-09
8prk_A287 The R78k And D117e Active Site Variants Of Saccharo 7e-09
1m38_A287 Structure Of Inorganic Pyrophosphatase Length = 287 7e-09
1huk_A281 Refined Structure Of Yeast Inorganic Pyrophosphatas 8e-09
1huj_A281 Refined Structure Of Yeast Inorganic Pyrophosphatas 8e-09
2ik1_A286 Yeast Inorganic Pyrophosphatase Variant Y93f With M 2e-08
2ik7_A286 Yeast Inorganic Pyrophosphatase Variant D120n With 2e-08
117e_A286 The R78k And D117e Active Site Variants Of Saccharo 2e-08
2ik6_A286 Yeast Inorganic Pyrophosphatase Variant D120e With 2e-08
2ik9_A286 Yeast Inorganic Pyrophosphatase Variant D152e With 2e-08
2ik2_A286 Yeast Inorganic Pyrophosphatase Variant D115e With 2e-08
1pyp_A285 X-Ray Diffraction Study Of Inorganic Pyrophosphatas 6e-08
>pdb|1TWL|A Chain A, Inorganic Pyrophosphatase From Pyrococcus Furiosus Pfu-264096-001 Length = 186 Back     alignment and structure 
Iteration: 1

 Score =  129 bits (325), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 99/171 (57%), Gaps = 22/171 (12%)
Query: 34  AAHPWHDLEIGPGAPAVCNCV----------------------DRVLYSSVVYPHNYGFI 71
            ++P+HDLE GP  P V   +                      DRVLYS   YP +YG I
Sbjct: 8   GSNPFHDLEPGPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGII 67
Query: 72  PRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHY 131
           PRT  ED DP D++V+M+EPV P + +  R IGL  MID G+KD K++AV  +DP F+ +
Sbjct: 68  PRTWYEDDDPFDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDW 127
Query: 132 KDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLY 182
           KDI ++P   L EI  FF+ YK+ + K++ VE +  AEAA   I  ++++Y
Sbjct: 128 KDIDDVPKAFLDEIAHFFKRYKELQGKEIIVEGWEGAEAAKREILRAIEMY 178
>pdb|1UDE|A Chain A, Crystal Structure Of The Inorganic Pyrophosphatase From The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3 Length = 195 Back     alignment and structure
>pdb|3I98|A Chain A, X-Ray Crystallographic Structure Of Inorganic Pyrophosphatase At 298k From Archaeon Thermococcus Thioreducens Length = 178 Back     alignment and structure
>pdb|3Q46|A Chain A, Magnesium Activated Inorganic Pyrophosphatase From Thermococcus Thioreducens Bound To Hydrolyzed Product At 0.99 Angstrom Resolution Length = 178 Back     alignment and structure
>pdb|3R6E|A Chain A, The Structure Of Thermococcus Thioreducens' Inorganic Pyrophosphatase Bound To Sulfate Length = 178 Back     alignment and structure
>pdb|2BQX|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium Helicobacter Pylori-Kinetic And Structural Properties Length = 173 Back     alignment and structure
>pdb|1QEZ|A Chain A, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An Archael Pyrophosphatase. Length = 173 Back     alignment and structure
>pdb|1YGZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Helicobacter Pylori Length = 173 Back     alignment and structure
>pdb|2UXS|A Chain A, 2.7a Crystal Structure Of Inorganic Pyrophosphatase (rv3628) From Mycobacterium Tuberculosis At Ph 7.5 Length = 169 Back     alignment and structure
>pdb|1SXV|A Chain A, 1.3a Crystal Structure Of Rv3628, Mycobacterium Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph5.0 Length = 172 Back     alignment and structure
>pdb|1WCF|A Chain A, 1.54 A Crystal Structure Of Rv3628, Mycobacterium Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph7.0 Length = 171 Back     alignment and structure
>pdb|2PRD|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Thermus Thermophilus Length = 174 Back     alignment and structure
>pdb|3SW5|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Bartonella Henselae Length = 180 Back     alignment and structure
>pdb|2EIP|A Chain A, Inorganic Pyrophosphatase Length = 175 Back     alignment and structure
>pdb|3D53|A Chain A, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From Rickettsia Prowazekii Length = 173 Back     alignment and structure
>pdb|1OBW|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 175 Back     alignment and structure
>pdb|1MJZ|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D97n Length = 175 Back     alignment and structure
>pdb|1MJW|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D42n Length = 175 Back     alignment and structure
>pdb|1MJX|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D65n Length = 175 Back     alignment and structure
>pdb|1MJY|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D70n Length = 175 Back     alignment and structure
>pdb|2AU7|A Chain A, The R43q Active Site Variant Of E.Coli Inorganic Pyrophosphatase Length = 175 Back     alignment and structure
>pdb|4ECP|A Chain A, X-Ray Crystal Structure Of Inorganic Pyrophosphate Ppa From Mycobacterium Leprae Length = 167 Back     alignment and structure
>pdb|3D63|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Burkholderia Pseudomallei Length = 196 Back     alignment and structure
>pdb|3FQ3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Brucella Melitensis Length = 197 Back     alignment and structure
>pdb|3LO0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Ehrlichia Chaffeensis Length = 193 Back     alignment and structure
>pdb|3LD3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Anaplasma Phagocytophilum At 1.75a Resolution Length = 199 Back     alignment and structure
>pdb|3TR4|A Chain A, Structure Of An Inorganic Pyrophosphatase (Ppa) From Coxiella Burnetii Length = 178 Back     alignment and structure
>pdb|3I4Q|A Chain A, Structure Of A Putative Inorganic Pyrophosphatase From The Oil- Degrading Bacterium Oleispira Antarctica Length = 176 Back     alignment and structure
>pdb|2IK0|A Chain A, Yeast Inorganic Pyrophosphatase Variant E48d With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|1YPP|A Chain A, Acid Anhydride Hydrolase Length = 286 Back     alignment and structure
>pdb|1WGI|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 286 Back     alignment and structure
>pdb|8PRK|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces Cerevisiae Soluble Inorganic Pyrophosphatase: Structural Studies And Mechanistic Implications Length = 287 Back     alignment and structure
>pdb|1M38|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 287 Back     alignment and structure
>pdb|1HUK|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And Its K61r Mutant Length = 281 Back     alignment and structure
>pdb|1HUJ|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And Its K61r Mutant Length = 281 Back     alignment and structure
>pdb|2IK1|A Chain A, Yeast Inorganic Pyrophosphatase Variant Y93f With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|2IK7|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120n With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|117E|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces Cerevisiae Soluble Inorganic Pyrophosphatase: Structural Studies And Mechanistic Implications Length = 286 Back     alignment and structure
>pdb|2IK6|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120e With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|2IK9|A Chain A, Yeast Inorganic Pyrophosphatase Variant D152e With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|2IK2|A Chain A, Yeast Inorganic Pyrophosphatase Variant D115e With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|1PYP|A Chain A, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From Baker,S Yeast At The 3 Angstroms Resolution (Russian) Length = 285 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query192
3q46_A178 TT-ippase; inorganic pyrophosphatase, hydrolase; H 2e-79
3gvf_A196 Inorganic pyrophosphatase; structural genomics, hy 7e-76
1sxv_A172 Inorganic pyrophosphatase; structural genomics, pp 1e-75
2prd_A174 Pyrophosphate phosphohydrolase; 2.00A {Thermus the 1e-75
3ld3_A199 Inorganic pyrophosphatase; structural genomics, se 2e-75
1qez_A173 Ppase, S-ppase, protein (inorganic pyrophosphatase 7e-74
2bqx_A173 Inorganic pyrophosphatase; hydrolase; 1.90A {Helic 1e-72
2au7_A175 Inorganic pyrophosphatase; hydrolase, mutant; 1.05 2e-72
3fq3_A197 Inorganic pyrophosphatase:bacterial/archaeal INOR 5e-72
3tr4_A178 Inorganic pyrophosphatase; central intermediary me 9e-70
3d53_A173 Inorganic pyrophosphatase; seattle structural G ce 1e-68
1e9g_A286 Ppase, inorganic pyrophosphatase; pyrophosphate ph 1e-55
>3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A Length = 178 Back     alignment and structure
 Score =  233 bits (597), Expect = 2e-79
 Identities = 64/170 (37%), Positives = 94/170 (55%), Gaps = 22/170 (12%)

Query: 36  HPWHDLEIGPGAPAVCNC----------------------VDRVLYSSVVYPHNYGFIPR 73
           +P+H+LE GP  P V                         +DRVLYS   YP +YG IP+
Sbjct: 2   NPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVDYGIIPQ 61

Query: 74  TICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKD 133
           T  +D DP D++V+M+EPV P + +  R IG+M M D G+KD K++AV  +DP F  +KD
Sbjct: 62  TWYDDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKD 121

Query: 134 IKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYA 183
           I ++P   L EI  FF+ YK+ + K   +E +  AE A   I  ++++Y 
Sbjct: 122 ISDVPKAFLDEIAHFFQRYKELQGKTTKIEGWGNAEEAKREILRAIEMYK 171
>3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A* Length = 196 Back     alignment and structure
>1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A Length = 172 Back     alignment and structure
>2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1 Length = 174 Back     alignment and structure
>3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A Length = 199 Back     alignment and structure
>1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1 Length = 173 Back     alignment and structure
>2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A Length = 173 Back     alignment and structure
>2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A* Length = 175 Back     alignment and structure
>3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A Length = 197 Back     alignment and structure
>3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} Length = 178 Back     alignment and structure
>3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A* Length = 173 Back     alignment and structure
>1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A Length = 286 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query192
3q46_A178 TT-ippase; inorganic pyrophosphatase, hydrolase; H 100.0
3gvf_A196 Inorganic pyrophosphatase; structural genomics, hy 100.0
3fq3_A197 Inorganic pyrophosphatase:bacterial/archaeal INOR 100.0
2prd_A174 Pyrophosphate phosphohydrolase; 2.00A {Thermus the 100.0
3ld3_A199 Inorganic pyrophosphatase; structural genomics, se 100.0
2au7_A175 Inorganic pyrophosphatase; hydrolase, mutant; 1.05 100.0
1e9g_A286 Ppase, inorganic pyrophosphatase; pyrophosphate ph 100.0
2bqx_A173 Inorganic pyrophosphatase; hydrolase; 1.90A {Helic 100.0
3d53_A173 Inorganic pyrophosphatase; seattle structural G ce 100.0
3tr4_A178 Inorganic pyrophosphatase; central intermediary me 100.0
1qez_A173 Ppase, S-ppase, protein (inorganic pyrophosphatase 100.0
1sxv_A172 Inorganic pyrophosphatase; structural genomics, pp 100.0
>3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} SCOP: b.40.5.1 PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A Back     alignment and structure
Probab=100.00  E-value=4.3e-64  Score=415.02  Aligned_cols=153  Identities=42%  Similarity=0.769  Sum_probs=148.3

Q ss_pred             cccCCCCCCCCCCCCeEEEE----------------------eeeccccccccccCCCCCcccCCCCCcceeEEecCccC
Q 029542           35 AHPWHDLEIGPGAPAVCNCV----------------------DRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPV   92 (192)
Q Consensus        35 ~spwhdipl~~~~p~~vn~v----------------------DR~l~~~~~yP~NYGfIP~T~~~DgDPLDvlvl~~~p~   92 (192)
                      +||||+||++.+.|++||+|                      ||+|++++.||+|||||||||++||||||||||++.|+
T Consensus         1 ~spwhdi~~g~~~p~~~nvvIEIP~gs~~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl~~~~~   80 (178)
T 3q46_A            1 MNPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVDYGIIPQTWYDDGDPFDIMVIMREPV   80 (178)
T ss_dssp             CCTTTTSCSCSBTTTBCCCEEEECTTCCEEEEECTTTSCEEEEEECSSSCCCSSEEEECTTCCBTTTBCCEEEECCSSCC
T ss_pred             CCccccCCCCCCCCCEEEEEEEECCCCCeeEEECCCCCCEEEeecccCCCCCCcccccCCCccCCCCCeeEEEEEcCCCC
Confidence            68999999999999999999                      89999999999999999999999999999999999999


Q ss_pred             CCeeEEEEEEeEEEEeeeCCCCCceEEEEecCCCCcCCCCCCCCCChhHHHHHHHHHHHhhcCCCceeEeccccCHHHHH
Q 029542           93 LPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAI  172 (192)
Q Consensus        93 ~~G~v~~vrviGvl~miD~ge~D~KiIaV~~~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~legK~v~~~~~~~~~~A~  172 (192)
                      .|||+++|||||+|+|+|+||+|||||||+++||+|++|+|++|||++++++|+|||++||.+|||++++.+|.++++|+
T Consensus        81 ~pG~vi~~r~iGvl~m~Dege~D~KiiaV~~~Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~legK~v~~~g~~~~~~A~  160 (178)
T 3q46_A           81 YPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKDISDVPKAFLDEIAHFFQRYKELQGKTTKIEGWGNAEEAK  160 (178)
T ss_dssp             CTTCBC-CEEEEEEEEEETTEECCEEEEECTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTGGGTCCEEEEEEEEHHHHH
T ss_pred             CCceEEEEEEEEEEEeecCCCccceEEEeeCCCccccccCChHHCCHHHHHHHHHHHHHhcCcCCCceEeccccCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 029542          173 EAIKYSMDLYASYIV  187 (192)
Q Consensus       173 ~vI~~~~~~y~~~~~  187 (192)
                      ++|++|+++|++++.
T Consensus       161 ~~I~~~~~~~~~~~~  175 (178)
T 3q46_A          161 REILRAIEMYKEKFG  175 (178)
T ss_dssp             HHHHHHHHHHHHC-C
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999998764
>3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A* Back     alignment and structure
>3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A Back     alignment and structure
>2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1 Back     alignment and structure
>3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A Back     alignment and structure
>2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A* Back     alignment and structure
>1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A Back     alignment and structure
>2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A Back     alignment and structure
>3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A* Back     alignment and structure
>3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} SCOP: b.40.5.0 Back     alignment and structure
>1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1 Back     alignment and structure
>1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 192
d1twla_173 b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcu 2e-51
d2prda_174 b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus t 5e-45
d1e9ga_284 b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's y 2e-44
d1i40a_175 b.40.5.1 (A:) Inorganic pyrophosphatase {Escherich 3e-43
d1qeza_170 b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon 7e-40
>d1twla_ b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcus furiosus [TaxId: 2261]} Length = 173 Back     information, alignment and structure

class: All beta proteins
fold: OB-fold
superfamily: Inorganic pyrophosphatase
family: Inorganic pyrophosphatase
domain: Inorganic pyrophosphatase
species: Pyrococcus furiosus [TaxId: 2261]

 Score =  161 bits (408), Expect = 2e-51
 Identities = 70/169 (41%), Positives = 98/169 (57%), Gaps = 22/169 (13%)

Query: 36  HPWHDLEIGPGAPAVCNCV----------------------DRVLYSSVVYPHNYGFIPR 73
           +P+HDLE GP  P V   +                      DRVLYS   YP +YG IPR
Sbjct: 1   NPFHDLEPGPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPR 60

Query: 74  TICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKD 133
           T  ED DP D++V+M+EPV P + +  R IGL  MID G+KD K++AV  +DP F+ +KD
Sbjct: 61  TWYEDDDPFDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKD 120

Query: 134 IKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLY 182
           I ++P   L EI  FF+ YK+ + K++ VE +  AEAA   I  ++++Y
Sbjct: 121 IDDVPKAFLDEIAHFFKRYKELQGKEIIVEGWEGAEAAKREILRAIEMY 169
>d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus thermophilus [TaxId: 274]} Length = 174 Back     information, alignment and structure
>d1e9ga_ b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 284 Back     information, alignment and structure
>d1i40a_ b.40.5.1 (A:) Inorganic pyrophosphatase {Escherichia coli [TaxId: 562]} Length = 175 Back     information, alignment and structure
>d1qeza_ b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 170 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query192
d1twla_173 Inorganic pyrophosphatase {Pyrococcus furiosus [Ta 100.0
d1e9ga_284 Inorganic pyrophosphatase {Baker's yeast (Saccharo 100.0
d2prda_174 Inorganic pyrophosphatase {Thermus thermophilus [T 100.0
d1qeza_170 Inorganic pyrophosphatase {Archaeon Sulfolobus aci 100.0
d1i40a_175 Inorganic pyrophosphatase {Escherichia coli [TaxId 100.0
>d1twla_ b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
class: All beta proteins
fold: OB-fold
superfamily: Inorganic pyrophosphatase
family: Inorganic pyrophosphatase
domain: Inorganic pyrophosphatase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=3.9e-61  Score=393.56  Aligned_cols=150  Identities=47%  Similarity=0.839  Sum_probs=146.5

Q ss_pred             ccCCCCCCCCCCCCeEEEE----------------------eeeccccccccccCCCCCcccCCCCCcceeEEecCccCC
Q 029542           36 HPWHDLEIGPGAPAVCNCV----------------------DRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVL   93 (192)
Q Consensus        36 spwhdipl~~~~p~~vn~v----------------------DR~l~~~~~yP~NYGfIP~T~~~DgDPLDvlvl~~~p~~   93 (192)
                      |||||||++++.|++||||                      ||.+++++.||+|||||||||++||||||||||++.|+.
T Consensus         1 ~pwhdi~~~~~~p~~vn~viEIP~gs~~KyE~dk~~g~~~~dr~l~~~~~yP~nYGfiP~T~~~DgDPLDvlvl~~~~~~   80 (173)
T d1twla_           1 NPFHDLEPGPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPRTWYEDDDPFDIMVIMREPVY   80 (173)
T ss_dssp             CHHHHSCSCSBTTTBEEEEEEECTTCSEEEEECTTTCCEEEEEECSSSCCCSSEEEECTTCCBCCB-CCEEEECCSSCCC
T ss_pred             CCccCCCCCCCCCCeEEEEEEECCCCCcCEEEccCCCceeeeeecCCCccCCcccceeeccccCCCCCchheeccccccC
Confidence            7999999999999999999                      899999999999999999999999999999999999999


Q ss_pred             CeeEEEEEEeEEEEeeeCCCCCceEEEEecCCCCcCCCCCCCCCChhHHHHHHHHHHHhhcCCCceeEeccccCHHHHHH
Q 029542           94 PGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIE  173 (192)
Q Consensus        94 ~G~v~~vrviGvl~miD~ge~D~KiIaV~~~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~legK~v~~~~~~~~~~A~~  173 (192)
                      ||++++|||||+|+|+|+||.|||||||+++||+|++++|++||+++++++|++||++||.++||++++.+|.|+++|++
T Consensus        81 ~G~vv~~r~iG~l~m~D~ge~D~Kiiav~~~dp~~~~i~~i~dl~~~~l~~I~~fF~~YK~~egK~v~v~g~~~~~~A~k  160 (173)
T d1twla_          81 PLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFFKRYKELQGKEIIVEGWEGAEAAKR  160 (173)
T ss_dssp             TTCEEEEEEEEEEEEEETTEECCEEEEEETTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTGGGTCCEEEEEEEEHHHHHH
T ss_pred             CceEEEEEEEEEEEeccCCCccceEEEEecCCchhhccCChHHCCHHHHHHHHHHHHHcCCCCCCceEEcCccCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 029542          174 AIKYSMDLYASY  185 (192)
Q Consensus       174 vI~~~~~~y~~~  185 (192)
                      +|++||++|++.
T Consensus       161 ~I~~~~~~y~~~  172 (173)
T d1twla_         161 EILRAIEMYKEK  172 (173)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhh
Confidence            999999999873
>d1e9ga_ b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1qeza_ b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1i40a_ b.40.5.1 (A:) Inorganic pyrophosphatase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure