Citrus Sinensis ID: 029582
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 191 | ||||||
| 363807364 | 183 | uncharacterized protein LOC100811705 pre | 0.570 | 0.595 | 0.721 | 2e-41 | |
| 356577066 | 176 | PREDICTED: glucan endo-1,3-beta-glucosid | 0.549 | 0.596 | 0.718 | 1e-40 | |
| 359472536 | 193 | PREDICTED: glucan endo-1,3-beta-glucosid | 0.963 | 0.953 | 0.55 | 2e-40 | |
| 363814437 | 217 | uncharacterized protein LOC100801269 pre | 0.549 | 0.483 | 0.709 | 3e-39 | |
| 224098966 | 184 | predicted protein [Populus trichocarpa] | 0.926 | 0.961 | 0.515 | 4e-39 | |
| 356494987 | 215 | PREDICTED: glucan endo-1,3-beta-glucosid | 0.549 | 0.488 | 0.7 | 2e-38 | |
| 357475031 | 194 | Glucan endo-1,3-beta-glucosidase-like pr | 0.560 | 0.551 | 0.666 | 4e-38 | |
| 357475033 | 195 | Glucan endo-1,3-beta-glucosidase-like pr | 0.549 | 0.538 | 0.678 | 5e-38 | |
| 225457225 | 207 | PREDICTED: glucan endo-1,3-beta-glucosid | 0.979 | 0.903 | 0.516 | 7e-38 | |
| 359472538 | 114 | PREDICTED: glucan endo-1,3-beta-glucosid | 0.544 | 0.912 | 0.636 | 2e-35 |
| >gi|363807364|ref|NP_001242632.1| uncharacterized protein LOC100811705 precursor [Glycine max] gi|255639201|gb|ACU19899.1| unknown [Glycine max] | Back alignment and taxonomy information |
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Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/115 (72%), Positives = 95/115 (82%), Gaps = 6/115 (5%)
Query: 1 MALIAYLVLFMAMTGHSTALYCLCKQGLSQSVLQKAIDYACGAGADCTPILQNGVCWNPN 60
MAL+ YLVLF+A+T HS+ALYCLCK G+S LQKAIDYACG+GADCTPILQNG C+ PN
Sbjct: 1 MALLVYLVLFLALTDHSSALYCLCKDGVSDQTLQKAIDYACGSGADCTPILQNGACYQPN 60
Query: 61 TVQDHCNYAVNSYFQRKGQTPGSCDFAGAAATN-----AAGGCVYPSTGSPGTGT 110
TV+DHCNYAVNSY+QRKG PG+CDFAGAA TN A+ GCVYPS+ S TGT
Sbjct: 61 TVKDHCNYAVNSYYQRKGNAPGTCDFAGAATTNANPPTASSGCVYPSSPS-NTGT 114
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356577066|ref|XP_003556650.1| PREDICTED: glucan endo-1,3-beta-glucosidase-like protein At1g69295-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|359472536|ref|XP_003631162.1| PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 3-like isoform 2 [Vitis vinifera] gi|147767697|emb|CAN73948.1| hypothetical protein VITISV_027381 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|363814437|ref|NP_001242853.1| uncharacterized protein LOC100801269 precursor [Glycine max] gi|255640987|gb|ACU20773.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224098966|ref|XP_002311337.1| predicted protein [Populus trichocarpa] gi|222851157|gb|EEE88704.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356494987|ref|XP_003516362.1| PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 2-like [Glycine max] gi|255627417|gb|ACU14053.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|357475031|ref|XP_003607801.1| Glucan endo-1,3-beta-glucosidase-like protein [Medicago truncatula] gi|355508856|gb|AES89998.1| Glucan endo-1,3-beta-glucosidase-like protein [Medicago truncatula] gi|388519303|gb|AFK47713.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|357475033|ref|XP_003607802.1| Glucan endo-1,3-beta-glucosidase-like protein [Medicago truncatula] gi|355508857|gb|AES89999.1| Glucan endo-1,3-beta-glucosidase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|225457225|ref|XP_002284112.1| PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 3 [Vitis vinifera] gi|297733880|emb|CBI15127.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359472538|ref|XP_002267413.2| PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 3-like isoform 1 [Vitis vinifera] gi|297738081|emb|CBI27282.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 191 | ||||||
| TAIR|locus:2027428 | 184 | PDCB3 "plasmodesmata callose-b | 0.450 | 0.467 | 0.604 | 9.1e-29 | |
| TAIR|locus:2159436 | 201 | PDCB1 "plasmodesmata callose-b | 0.450 | 0.427 | 0.558 | 1.8e-25 | |
| TAIR|locus:2142778 | 194 | E13L3 ""glucan endo-1,3-beta-g | 0.434 | 0.427 | 0.595 | 9.7e-25 | |
| TAIR|locus:2014829 | 197 | AT1G13830 "AT1G13830" [Arabido | 0.450 | 0.436 | 0.511 | 2.9e-23 | |
| TAIR|locus:505006212 | 222 | PDCB4 "plasmodesmata callose-b | 0.445 | 0.382 | 0.546 | 6.1e-23 | |
| TAIR|locus:504955930 | 168 | AT2G03505 "AT2G03505" [Arabido | 0.450 | 0.511 | 0.511 | 1.3e-22 | |
| TAIR|locus:2140882 | 231 | AT4G13600 [Arabidopsis thalian | 0.497 | 0.411 | 0.435 | 1.5e-19 | |
| TAIR|locus:2197980 | 197 | AT1G26450 "AT1G26450" [Arabido | 0.445 | 0.431 | 0.476 | 1.1e-18 | |
| TAIR|locus:1009023225 | 227 | AT2G30933 "AT2G30933" [Arabido | 0.340 | 0.286 | 0.447 | 7.9e-14 | |
| TAIR|locus:2206355 | 397 | AT1G79480 [Arabidopsis thalian | 0.366 | 0.176 | 0.442 | 8e-14 |
| TAIR|locus:2027428 PDCB3 "plasmodesmata callose-binding protein 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 52/86 (60%), Positives = 72/86 (83%)
Query: 1 MALIAYLVLFMAMTGHSTALYCLCKQGLSQSVLQKAIDYACGAGADCTPILQNGVCWNPN 60
MA+ +++ +AM GHS+ +C+CK+GLS+++LQK +DYACGAGADC PI Q G C+NPN
Sbjct: 1 MAVFVLVMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNPN 60
Query: 61 TVQDHCNYAVNSYFQRKGQTPGSCDF 86
TV+ HC+YAVNS+FQ+KGQ+ G+CDF
Sbjct: 61 TVKSHCSYAVNSFFQKKGQSLGTCDF 86
|
|
| TAIR|locus:2159436 PDCB1 "plasmodesmata callose-binding protein 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2142778 E13L3 ""glucan endo-1,3-beta-glucosidase-like protein 3"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2014829 AT1G13830 "AT1G13830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:505006212 PDCB4 "plasmodesmata callose-binding protein 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:504955930 AT2G03505 "AT2G03505" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2140882 AT4G13600 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2197980 AT1G26450 "AT1G26450" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:1009023225 AT2G30933 "AT2G30933" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2206355 AT1G79480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| grail3.0010024201 | hypothetical protein (184 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 191 | |||
| smart00768 | 85 | smart00768, X8, Possibly involved in carbohydrate | 7e-30 | |
| pfam07983 | 77 | pfam07983, X8, X8 domain | 3e-20 | |
| pfam05642 | 727 | pfam05642, Sporozoite_P67, Sporozoite P67 surface | 8e-05 | |
| COG3889 | 872 | COG3889, COG3889, Predicted solute binding protein | 1e-04 | |
| TIGR04216 | 782 | TIGR04216, halo_surf_glyco, major cell surface gly | 6e-04 |
| >gnl|CDD|197867 smart00768, X8, Possibly involved in carbohydrate binding | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 7e-30
Identities = 40/85 (47%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 20 LYCLCKQGLSQSVLQKAIDYACGAGADCTPILQNGVCWNPNTVQDHCNYAVNSYFQRKGQ 79
L+C+ K ++ LQ A+DYACG GADCT I G C++PNTV+ H +YA NSY+Q++GQ
Sbjct: 1 LWCVAKPDADEAALQAALDYACGQGADCTAIQPGGSCYSPNTVKAHASYAFNSYYQKQGQ 60
Query: 80 TPGSCDFAGAAATNAA----GGCVY 100
+ G+CDF+G A G C +
Sbjct: 61 SSGACDFSGTATITTTDPSTGSCKF 85
|
The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. Length = 85 |
| >gnl|CDD|219681 pfam07983, X8, X8 domain | Back alignment and domain information |
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| >gnl|CDD|218673 pfam05642, Sporozoite_P67, Sporozoite P67 surface antigen | Back alignment and domain information |
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| >gnl|CDD|226406 COG3889, COG3889, Predicted solute binding protein [General function prediction only] | Back alignment and domain information |
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| >gnl|CDD|234504 TIGR04216, halo_surf_glyco, major cell surface glycoprotein | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 191 | |||
| smart00768 | 85 | X8 Possibly involved in carbohydrate binding. The | 99.97 | |
| PF07983 | 78 | X8: X8 domain; InterPro: IPR012946 The X8 domain [ | 99.93 |
| >smart00768 X8 Possibly involved in carbohydrate binding | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-31 Score=199.37 Aligned_cols=81 Identities=49% Similarity=1.077 Sum_probs=77.3
Q ss_pred cceeeCCCCCHHHHHHHHHHhhCCCCCCcccCCCCcccCCCChhhhHhHHHHHHHHHhCCCCCCCCCCCceEEee----c
Q 029582 20 LYCLCKQGLSQSVLQKAIDYACGAGADCTPILQNGVCWNPNTVQDHCNYAVNSYFQRKGQTPGSCDFAGAAATNA----A 95 (191)
Q Consensus 20 lwCVak~~~~~~~Lq~~ldyACg~g~DCs~I~~gGsCyspct~~~haSYAfNsYYQ~~~~~~~aCdF~GtAtltt----~ 95 (191)
+|||+|+++++++||++|||||++++||++|++||+||+||++++|+|||||+|||++++..++|||+|.|++++ +
T Consensus 1 ~wCv~~~~~~~~~l~~~~~yaCg~~~dC~~I~~~g~c~~~~~~~~~aS~a~N~YYq~~~~~~~aC~F~G~a~~~~~~ps~ 80 (85)
T smart00768 1 LWCVAKPDADEAALQAALDYACGQGADCTAIQPGGSCYSPNTVKAHASYAFNSYYQKQGQSSGACDFGGTATITTTDPST 80 (85)
T ss_pred CccccCCCCCHHHHHHHHHHHhcCCCCccccCCCCcccCCCCHHHHHHHHHHHHHHHcCCCCCcCCCCCceEEEecCCCC
Confidence 599999999999999999999998799999999999999999999999999999999999999999999999977 5
Q ss_pred Cceee
Q 029582 96 GGCVY 100 (191)
Q Consensus 96 gsC~f 100 (191)
++|+|
T Consensus 81 ~~C~~ 85 (85)
T smart00768 81 GSCKF 85 (85)
T ss_pred CccCC
Confidence 67875
|
The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
| >PF07983 X8: X8 domain; InterPro: IPR012946 The X8 domain [] contains 6 conserved cysteine residues that presumably form three disulphide bridges | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 191 | ||||
| 2jon_A | 101 | Solution Structure Of The C-Terminal Domain Ole E 9 | 1e-10 |
| >pdb|2JON|A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 Length = 101 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 191 | |||
| 2jon_A | 101 | Beta-1,3-glucanase; olive pollen, allergen; NMR {O | 3e-28 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 8e-19 |
| >2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea} Length = 101 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-28
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 14 TGHSTALYCLCKQGLSQSVLQKAIDYACGAGADCTPILQNGVCWNPNTVQDHCNYAVNSY 73
T + +C+ K G+S L I+YAC G DC PI G C+ PNTV+ H Y +N Y
Sbjct: 6 TPKAAGSWCVPKPGVSDDQLTGNINYACSQGIDCGPIQPGGACFEPNTVKAHAAYVMNLY 65
Query: 74 FQRKGQTPGSCDFAGAAATNA----AGGCVYPSTGS 105
+Q G+ +CDF+ A G C +PS +
Sbjct: 66 YQHAGRNSWNCDFSQTATLTNTNPSYGACNFPSGSN 101
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Length = 555 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 191 | |||
| 2jon_A | 101 | Beta-1,3-glucanase; olive pollen, allergen; NMR {O | 100.0 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 99.92 |
| >2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-35 Score=222.75 Aligned_cols=88 Identities=39% Similarity=0.850 Sum_probs=83.6
Q ss_pred CCCccceeeCCCCCHHHHHHHHHHhhCCCCCCcccCCCCcccCCCChhhhHhHHHHHHHHHhCCCCCCCCCCCceEEee-
Q 029582 16 HSTALYCLCKQGLSQSVLQKAIDYACGAGADCTPILQNGVCWNPNTVQDHCNYAVNSYFQRKGQTPGSCDFAGAAATNA- 94 (191)
Q Consensus 16 ~~~slwCVak~~~~~~~Lq~~ldyACg~g~DCs~I~~gGsCyspct~~~haSYAfNsYYQ~~~~~~~aCdF~GtAtltt- 94 (191)
..+++|||+|+++++++||++|||||++++||++|++||+||+||++++|+|||||+|||++++..++|||+|+|+|++
T Consensus 8 ~~~~~wCVak~~~~~~~l~~~ldyACg~gaDC~~I~~gg~Cy~p~t~~~haSyAfN~YYq~~~~~~~aCdF~G~A~it~~ 87 (101)
T 2jon_A 8 KAAGSWCVPKPGVSDDQLTGNINYACSQGIDCGPIQPGGACFEPNTVKAHAAYVMNLYYQHAGRNSWNCDFSQTATLTNT 87 (101)
T ss_dssp CCCSCEEEECTTSCHHHHHHHHHHHTTTSSSSSTTCCCSSSCSSCCTTHHHHHHHHHHHHHHTSSGGGCCSCSSEEEESS
T ss_pred CCCCcEEEECCCCCHHHHHHHHHHHcCCCCCccccCcCCcccCCCCHHHHHHHHHHHHHHHcCCCCCccCCCCeEEEeec
Confidence 3467899999999999999999999998889999999999999999999999999999999999999999999999987
Q ss_pred ---cCceeeccc
Q 029582 95 ---AGGCVYPST 103 (191)
Q Consensus 95 ---~gsC~fp~s 103 (191)
+++|+|+.+
T Consensus 88 dPS~g~C~f~~~ 99 (101)
T 2jon_A 88 NPSYGACNFPSG 99 (101)
T ss_dssp CCCCSSSCCCCS
T ss_pred CCCCCceecCCC
Confidence 789999874
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00