Citrus Sinensis ID: 029590
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 191 | ||||||
| 356556652 | 235 | PREDICTED: bidirectional sugar transport | 0.801 | 0.651 | 0.625 | 8e-55 | |
| 255639413 | 210 | unknown [Glycine max] | 0.769 | 0.7 | 0.617 | 1e-53 | |
| 356544144 | 235 | PREDICTED: bidirectional sugar transport | 0.827 | 0.672 | 0.592 | 2e-53 | |
| 351722328 | 235 | uncharacterized protein LOC100305842 [Gl | 0.827 | 0.672 | 0.597 | 4e-53 | |
| 225461810 | 235 | PREDICTED: bidirectional sugar transport | 0.774 | 0.629 | 0.620 | 2e-52 | |
| 358343709 | 235 | Protein RUPTURED POLLEN GRAIN [Medicago | 0.795 | 0.646 | 0.612 | 3e-52 | |
| 358348726 | 236 | Protein RUPTURED POLLEN GRAIN [Medicago | 0.769 | 0.622 | 0.612 | 7e-52 | |
| 388506414 | 236 | unknown [Medicago truncatula] | 0.769 | 0.622 | 0.612 | 7e-52 | |
| 217073964 | 236 | unknown [Medicago truncatula] gi|3884951 | 0.769 | 0.622 | 0.606 | 1e-50 | |
| 388521553 | 235 | unknown [Lotus japonicus] | 0.769 | 0.625 | 0.623 | 3e-46 |
| >gi|356556652|ref|XP_003546637.1| PREDICTED: bidirectional sugar transporter SWEET2-like [Glycine max] | Back alignment and taxonomy information |
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Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 115/184 (62%), Positives = 132/184 (71%), Gaps = 31/184 (16%)
Query: 6 TYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMW 65
Y V KDA G+AGNIFAFGLFVSP+PTFRRIIRN STE FSGLPY+Y+LLNC+I +W
Sbjct: 6 AYSICEVGKDAAGVAGNIFAFGLFVSPIPTFRRIIRNGSTEMFSGLPYIYSLLNCMICLW 65
Query: 66 YGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVSYPFSHMHLVYCSGSAICS 125
YGTPL+S DN+LVTTVNSIGAAFQLVYIILF+ Y EK
Sbjct: 66 YGTPLISPDNLLVTTVNSIGAAFQLVYIILFLMYAEK----------------------- 102
Query: 126 VNQFFPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASP 185
+R+VRM+GLLLAV+GIF II+ SLQI + R+MFVG LSCA+LISMFASP
Sbjct: 103 --------ARKVRMVGLLLAVLGIFVIILVGSLQIDDSAMRRMFVGFLSCASLISMFASP 154
Query: 186 LFII 189
LFII
Sbjct: 155 LFII 158
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255639413|gb|ACU20002.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|356544144|ref|XP_003540515.1| PREDICTED: bidirectional sugar transporter SWEET2-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|351722328|ref|NP_001237496.1| uncharacterized protein LOC100305842 [Glycine max] gi|255626749|gb|ACU13719.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|225461810|ref|XP_002285636.1| PREDICTED: bidirectional sugar transporter SWEET2 [Vitis vinifera] gi|302142809|emb|CBI20104.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|358343709|ref|XP_003635940.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|355501875|gb|AES83078.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|388509868|gb|AFK43000.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|358348726|ref|XP_003638394.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|355504329|gb|AES85532.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|388506414|gb|AFK41273.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|217073964|gb|ACJ85342.1| unknown [Medicago truncatula] gi|388495182|gb|AFK35657.1| unknown [Medicago truncatula] gi|388517353|gb|AFK46738.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|388521553|gb|AFK48838.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 191 | ||||||
| TAIR|locus:2099362 | 236 | SWEET2 "AT3G14770" [Arabidopsi | 0.921 | 0.745 | 0.455 | 6.5e-35 | |
| UNIPROTKB|Q8RZQ8 | 273 | SWEET1A "Bidirectional sugar t | 0.465 | 0.326 | 0.494 | 2.3e-31 | |
| UNIPROTKB|B8AYH1 | 261 | SWEET1B "Bidirectional sugar t | 0.455 | 0.333 | 0.517 | 4.2e-30 | |
| UNIPROTKB|Q60EC2 | 261 | SWEET1B "Bidirectional sugar t | 0.455 | 0.333 | 0.517 | 4.2e-30 | |
| UNIPROTKB|A2WR31 | 243 | SWEET2A "Bidirectional sugar t | 0.837 | 0.658 | 0.443 | 2.4e-28 | |
| UNIPROTKB|Q5JJY5 | 243 | SWEET2A "Bidirectional sugar t | 0.837 | 0.658 | 0.443 | 2.4e-28 | |
| UNIPROTKB|B8A833 | 230 | SWEET2B "Bidirectional sugar t | 0.890 | 0.739 | 0.419 | 5e-28 | |
| UNIPROTKB|Q5N8J1 | 230 | SWEET2B "Bidirectional sugar t | 0.890 | 0.739 | 0.419 | 5e-28 | |
| TAIR|locus:2123426 | 258 | SWEET7 [Arabidopsis thaliana ( | 0.528 | 0.391 | 0.405 | 2.7e-25 | |
| UNIPROTKB|Q8W0K2 | 254 | SWEET6B "Bidirectional sugar t | 0.486 | 0.366 | 0.430 | 4.9e-24 |
| TAIR|locus:2099362 SWEET2 "AT3G14770" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 88/193 (45%), Positives = 118/193 (61%)
Query: 9 ALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGT 68
+L++ KD GIAGNIFAFGLFVSP+PTFRRI+RN STE+FSGLPY+YALLNCLI +WYGT
Sbjct: 9 SLSMCKDVAGIAGNIFAFGLFVSPMPTFRRIMRNKSTEQFSGLPYIYALLNCLICLWYGT 68
Query: 69 PLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVSYPFSHMHLVYCS-GSAICSVN 127
P +S N ++ TVNS+GA FQL YIILFI +T+K K+ + +V+ G +
Sbjct: 69 PFISHSNAMLMTVNSVGATFQLCYIILFIMHTDKKNKMKM-LGLLFVVFAVVGVIVAGSL 127
Query: 128 QF-----------FPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCA 176
Q F C V M L VI + +I S++ + PF + L+S +
Sbjct: 128 QIPDQLTRWYFVGFLSCGSLVSMFASPLFVINL--VIRTKSVEFM-PFYLSLSTFLMSAS 184
Query: 177 ALI-SMFASPLFI 188
L+ +F S F+
Sbjct: 185 FLLYGLFNSDAFV 197
|
|
| UNIPROTKB|Q8RZQ8 SWEET1A "Bidirectional sugar transporter SWEET1a" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B8AYH1 SWEET1B "Bidirectional sugar transporter SWEET1b" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q60EC2 SWEET1B "Bidirectional sugar transporter SWEET1b" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2WR31 SWEET2A "Bidirectional sugar transporter SWEET2a" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5JJY5 SWEET2A "Bidirectional sugar transporter SWEET2a" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B8A833 SWEET2B "Bidirectional sugar transporter SWEET2b" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5N8J1 SWEET2B "Bidirectional sugar transporter SWEET2b" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2123426 SWEET7 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8W0K2 SWEET6B "Bidirectional sugar transporter SWEET6b" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00027922001 | SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (235 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 191 | |||
| pfam03083 | 87 | pfam03083, MtN3_slv, Sugar efflux transporter for | 4e-16 |
| >gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange | Back alignment and domain information |
|---|
Score = 69.5 bits (171), Expect = 4e-16
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 17 VGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNI 76
+G+ +F+ +F+SP+ R++I+ S E LP++ LL+ + + YG + +
Sbjct: 3 LGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYG---LLKKDG 59
Query: 77 LVTTVNSIGAAFQLVYIILFITYTEKDK 104
+ N +G +Y+ILFI Y K
Sbjct: 60 YIIIPNGVGCVLGTIYLILFIIYPPKKA 87
|
This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 191 | |||
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 99.96 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 99.87 | |
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 99.57 | |
| COG4095 | 89 | Uncharacterized conserved protein [Function unknow | 99.2 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 98.08 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 96.67 | |
| smart00679 | 32 | CTNS Repeated motif present between transmembrane | 94.22 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 90.78 | |
| PF03650 | 119 | MPC: Uncharacterised protein family (UPF0041); Int | 89.95 | |
| KOG1589 | 118 | consensus Uncharacterized conserved protein [Funct | 88.21 |
| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=211.48 Aligned_cols=147 Identities=43% Similarity=0.725 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHhcccCcccchhHHHHHHHHHHHHHHhcccccCCceEEEeeehhhhhhHH
Q 029590 11 TVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQL 90 (191)
Q Consensus 11 ~~~~~vvg~la~v~si~mflSPlp~~~~I~k~kst~~~s~~p~v~~~~n~~lWl~YGl~~l~~d~~~Ii~~N~~G~~l~~ 90 (191)
+....++|..|+++++++|++|+|+++||+|+||+|++|..||+++++||.+|+.|| .+++||..++.+|++|+++++
T Consensus 3 ~~~~~l~~i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG--~~~~~d~llitIN~~G~~ie~ 80 (243)
T KOG1623|consen 3 NVLLFLFGILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYG--LLKVHDYLLITINGIGLVIET 80 (243)
T ss_pred chHHHHHHHHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhh--hhccCceEEEEEehhcHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999 566646889999999999999
Q ss_pred HHhhhheeeccccccccccccccchhhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeeh
Q 029590 91 VYIILFITYTEKDKKVSYPFSHMHLVYCSGSAICSVNQFFPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFV 170 (191)
Q Consensus 91 ~yl~v~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (191)
+|+..|+.|+++|+... ......++. +..+++++....++++.+.+.+
T Consensus 81 ~Yi~~f~~ya~~k~~~~------------------------------~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~l 128 (243)
T KOG1623|consen 81 VYISIFLYYAPKKKTVK------------------------------IVLALVLGV--IGLIILLTLLLFHDPERRVSVL 128 (243)
T ss_pred HHHHHHheecCchheeE------------------------------eeehHHHHH--HHHHHHHHHHhcCCcceeeeee
Confidence 99999999999888531 011111111 1222334556778899999999
Q ss_pred hhHHHHHHHHHhhhchhhhhC
Q 029590 171 GLLSCAALISMFASPLFIIVR 191 (191)
Q Consensus 171 G~~~~~~~i~my~sPL~~~~~ 191 (191)
|.+|++++++||||||+.||+
T Consensus 129 G~vc~~~nI~~~~sPL~~m~~ 149 (243)
T KOG1623|consen 129 GIVCAVFNISMFAAPLSVIRK 149 (243)
T ss_pred ehhhhhhhHHhhhccHHhhhh
Confidence 999999999999999999974
|
|
| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
|---|
| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
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| >COG4095 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
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| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
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| >smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins | Back alignment and domain information |
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| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
|---|
| >PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function | Back alignment and domain information |
|---|
| >KOG1589 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00