Citrus Sinensis ID: 029590


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-
MILTITYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVSYPFSHMHLVYCSGSAICSVNQFFPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIIVR
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccEEEEEEHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEHHHHHHHHHHHHHHHHHHHHHc
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccccEEEEEEcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHcc
MILTITYQALTVLKDAVGIAGNIFAfglfvspvptfRRIIRnhsteefsglPYVYALLNCLITMwygtplvsadniLVTTVNSIGAAFQLVYIILFITYTekdkkvsypfshmhLVYCsgsaicsvnqffplCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFAsplfiivr
MILTITYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNhsteefsglPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVSYPFSHMHLVYCSGSAICSVNQFFPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMfasplfiivr
MILTITYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVSYPFSHMHLVYCSGSAICSVNQFFPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIIVR
*ILTITYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVSYPFSHMHLVYCSGSAICSVNQFFPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIIV*
********ALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVSYPFSHMHLVYCSGSAICSVNQFFPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIIVR
MILTITYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVSYPFSHMHLVYCSGSAICSVNQFFPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIIVR
MILTITYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVSYPFSHMHLVYCSGSAICSVNQFFPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIIVR
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHi
oooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo
ooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiii
oooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooooo
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHi
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MILTITYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVSYPFSHMHLVYCSGSAICSVNQFFPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIIVR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query191 2.2.26 [Sep-21-2011]
Q9LH79236 Bidirectional sugar trans yes no 0.785 0.635 0.541 1e-45
Q5JJY5243 Bidirectional sugar trans yes no 0.748 0.588 0.477 2e-36
A2WR31243 Bidirectional sugar trans N/A no 0.748 0.588 0.477 2e-36
Q5N8J1230 Bidirectional sugar trans no no 0.738 0.613 0.444 2e-32
B8A833230 Bidirectional sugar trans N/A no 0.738 0.613 0.444 2e-32
Q8RZQ8 273 Bidirectional sugar trans no no 0.738 0.516 0.383 1e-27
Q8L9J7247 Bidirectional sugar trans no no 0.738 0.570 0.366 1e-25
Q60EC2 261 Bidirectional sugar trans no no 0.743 0.544 0.372 2e-23
B8AYH1 261 Bidirectional sugar trans N/A no 0.743 0.544 0.372 2e-23
Q0J349265 Bidirectional sugar trans no no 0.492 0.354 0.457 5e-21
>sp|Q9LH79|SWET2_ARATH Bidirectional sugar transporter SWEET2 OS=Arabidopsis thaliana GN=SWEET2 PE=2 SV=1 Back     alignment and function desciption
 Score =  182 bits (462), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/181 (54%), Positives = 121/181 (66%), Gaps = 31/181 (17%)

Query: 9   ALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGT 68
           +L++ KD  GIAGNIFAFGLFVSP+PTFRRI+RN STE+FSGLPY+YALLNCLI +WYGT
Sbjct: 9   SLSMCKDVAGIAGNIFAFGLFVSPMPTFRRIMRNKSTEQFSGLPYIYALLNCLICLWYGT 68

Query: 69  PLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVSYPFSHMHLVYCSGSAICSVNQ 128
           P +S  N ++ TVNS+GA FQL YIILFI +T+K  K                       
Sbjct: 69  PFISHSNAMLMTVNSVGATFQLCYIILFIMHTDKKNK----------------------- 105

Query: 129 FFPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFI 188
                   ++MLGLL  V  +  +IVA SLQI +  +R  FVG LSC +L+SMFASPLF+
Sbjct: 106 --------MKMLGLLFVVFAVVGVIVAGSLQIPDQLTRWYFVGFLSCGSLVSMFASPLFV 157

Query: 189 I 189
           I
Sbjct: 158 I 158




Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.
Arabidopsis thaliana (taxid: 3702)
>sp|Q5JJY5|SWT2A_ORYSJ Bidirectional sugar transporter SWEET2a OS=Oryza sativa subsp. japonica GN=SWEET2A PE=2 SV=1 Back     alignment and function description
>sp|A2WR31|SWT2A_ORYSI Bidirectional sugar transporter SWEET2a OS=Oryza sativa subsp. indica GN=SWEET2A PE=3 SV=2 Back     alignment and function description
>sp|Q5N8J1|SWT2B_ORYSJ Bidirectional sugar transporter SWEET2b OS=Oryza sativa subsp. japonica GN=SWEET2B PE=2 SV=1 Back     alignment and function description
>sp|B8A833|SWT2B_ORYSI Bidirectional sugar transporter SWEET2b OS=Oryza sativa subsp. indica GN=SWEET2B PE=3 SV=1 Back     alignment and function description
>sp|Q8RZQ8|SWT1A_ORYSJ Bidirectional sugar transporter SWEET1a OS=Oryza sativa subsp. japonica GN=SWEET1A PE=2 SV=1 Back     alignment and function description
>sp|Q8L9J7|SWET1_ARATH Bidirectional sugar transporter SWEET1 OS=Arabidopsis thaliana GN=SWEET1 PE=1 SV=1 Back     alignment and function description
>sp|Q60EC2|SWT1B_ORYSJ Bidirectional sugar transporter SWEET1b OS=Oryza sativa subsp. japonica GN=SWEET1B PE=2 SV=1 Back     alignment and function description
>sp|B8AYH1|SWT1B_ORYSI Bidirectional sugar transporter SWEET1b OS=Oryza sativa subsp. indica GN=SWEET1B PE=3 SV=1 Back     alignment and function description
>sp|Q0J349|SWT7B_ORYSJ Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. japonica GN=SWEET7B PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query191
356556652235 PREDICTED: bidirectional sugar transport 0.801 0.651 0.625 8e-55
255639413210 unknown [Glycine max] 0.769 0.7 0.617 1e-53
356544144235 PREDICTED: bidirectional sugar transport 0.827 0.672 0.592 2e-53
351722328235 uncharacterized protein LOC100305842 [Gl 0.827 0.672 0.597 4e-53
225461810235 PREDICTED: bidirectional sugar transport 0.774 0.629 0.620 2e-52
358343709235 Protein RUPTURED POLLEN GRAIN [Medicago 0.795 0.646 0.612 3e-52
358348726236 Protein RUPTURED POLLEN GRAIN [Medicago 0.769 0.622 0.612 7e-52
388506414236 unknown [Medicago truncatula] 0.769 0.622 0.612 7e-52
217073964236 unknown [Medicago truncatula] gi|3884951 0.769 0.622 0.606 1e-50
388521553235 unknown [Lotus japonicus] 0.769 0.625 0.623 3e-46
>gi|356556652|ref|XP_003546637.1| PREDICTED: bidirectional sugar transporter SWEET2-like [Glycine max] Back     alignment and taxonomy information
 Score =  218 bits (556), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 115/184 (62%), Positives = 132/184 (71%), Gaps = 31/184 (16%)

Query: 6   TYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMW 65
            Y    V KDA G+AGNIFAFGLFVSP+PTFRRIIRN STE FSGLPY+Y+LLNC+I +W
Sbjct: 6   AYSICEVGKDAAGVAGNIFAFGLFVSPIPTFRRIIRNGSTEMFSGLPYIYSLLNCMICLW 65

Query: 66  YGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVSYPFSHMHLVYCSGSAICS 125
           YGTPL+S DN+LVTTVNSIGAAFQLVYIILF+ Y EK                       
Sbjct: 66  YGTPLISPDNLLVTTVNSIGAAFQLVYIILFLMYAEK----------------------- 102

Query: 126 VNQFFPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASP 185
                   +R+VRM+GLLLAV+GIF II+  SLQI +   R+MFVG LSCA+LISMFASP
Sbjct: 103 --------ARKVRMVGLLLAVLGIFVIILVGSLQIDDSAMRRMFVGFLSCASLISMFASP 154

Query: 186 LFII 189
           LFII
Sbjct: 155 LFII 158




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255639413|gb|ACU20002.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356544144|ref|XP_003540515.1| PREDICTED: bidirectional sugar transporter SWEET2-like [Glycine max] Back     alignment and taxonomy information
>gi|351722328|ref|NP_001237496.1| uncharacterized protein LOC100305842 [Glycine max] gi|255626749|gb|ACU13719.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|225461810|ref|XP_002285636.1| PREDICTED: bidirectional sugar transporter SWEET2 [Vitis vinifera] gi|302142809|emb|CBI20104.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|358343709|ref|XP_003635940.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|355501875|gb|AES83078.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|388509868|gb|AFK43000.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|358348726|ref|XP_003638394.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|355504329|gb|AES85532.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] Back     alignment and taxonomy information
>gi|388506414|gb|AFK41273.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|217073964|gb|ACJ85342.1| unknown [Medicago truncatula] gi|388495182|gb|AFK35657.1| unknown [Medicago truncatula] gi|388517353|gb|AFK46738.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|388521553|gb|AFK48838.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query191
TAIR|locus:2099362236 SWEET2 "AT3G14770" [Arabidopsi 0.921 0.745 0.455 6.5e-35
UNIPROTKB|Q8RZQ8273 SWEET1A "Bidirectional sugar t 0.465 0.326 0.494 2.3e-31
UNIPROTKB|B8AYH1261 SWEET1B "Bidirectional sugar t 0.455 0.333 0.517 4.2e-30
UNIPROTKB|Q60EC2261 SWEET1B "Bidirectional sugar t 0.455 0.333 0.517 4.2e-30
UNIPROTKB|A2WR31243 SWEET2A "Bidirectional sugar t 0.837 0.658 0.443 2.4e-28
UNIPROTKB|Q5JJY5243 SWEET2A "Bidirectional sugar t 0.837 0.658 0.443 2.4e-28
UNIPROTKB|B8A833230 SWEET2B "Bidirectional sugar t 0.890 0.739 0.419 5e-28
UNIPROTKB|Q5N8J1230 SWEET2B "Bidirectional sugar t 0.890 0.739 0.419 5e-28
TAIR|locus:2123426258 SWEET7 [Arabidopsis thaliana ( 0.528 0.391 0.405 2.7e-25
UNIPROTKB|Q8W0K2254 SWEET6B "Bidirectional sugar t 0.486 0.366 0.430 4.9e-24
TAIR|locus:2099362 SWEET2 "AT3G14770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
 Identities = 88/193 (45%), Positives = 118/193 (61%)

Query:     9 ALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGT 68
             +L++ KD  GIAGNIFAFGLFVSP+PTFRRI+RN STE+FSGLPY+YALLNCLI +WYGT
Sbjct:     9 SLSMCKDVAGIAGNIFAFGLFVSPMPTFRRIMRNKSTEQFSGLPYIYALLNCLICLWYGT 68

Query:    69 PLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVSYPFSHMHLVYCS-GSAICSVN 127
             P +S  N ++ TVNS+GA FQL YIILFI +T+K  K+      + +V+   G  +    
Sbjct:    69 PFISHSNAMLMTVNSVGATFQLCYIILFIMHTDKKNKMKM-LGLLFVVFAVVGVIVAGSL 127

Query:   128 QF-----------FPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCA 176
             Q            F  C   V M    L VI +  +I   S++ + PF   +   L+S +
Sbjct:   128 QIPDQLTRWYFVGFLSCGSLVSMFASPLFVINL--VIRTKSVEFM-PFYLSLSTFLMSAS 184

Query:   177 ALI-SMFASPLFI 188
              L+  +F S  F+
Sbjct:   185 FLLYGLFNSDAFV 197


GO:0003674 "molecular_function" evidence=ND
GO:0005886 "plasma membrane" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0005887 "integral to plasma membrane" evidence=ISS
GO:0051119 "sugar transmembrane transporter activity" evidence=ISS
UNIPROTKB|Q8RZQ8 SWEET1A "Bidirectional sugar transporter SWEET1a" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|B8AYH1 SWEET1B "Bidirectional sugar transporter SWEET1b" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q60EC2 SWEET1B "Bidirectional sugar transporter SWEET1b" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|A2WR31 SWEET2A "Bidirectional sugar transporter SWEET2a" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q5JJY5 SWEET2A "Bidirectional sugar transporter SWEET2a" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|B8A833 SWEET2B "Bidirectional sugar transporter SWEET2b" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q5N8J1 SWEET2B "Bidirectional sugar transporter SWEET2b" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2123426 SWEET7 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8W0K2 SWEET6B "Bidirectional sugar transporter SWEET6b" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LH79SWET2_ARATHNo assigned EC number0.54140.78530.6355yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00027922001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (235 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query191
pfam0308387 pfam03083, MtN3_slv, Sugar efflux transporter for 4e-16
>gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange Back     alignment and domain information
 Score = 69.5 bits (171), Expect = 4e-16
 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 17  VGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNI 76
           +G+   +F+  +F+SP+   R++I+  S E    LP++  LL+  + + YG   +   + 
Sbjct: 3   LGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYG---LLKKDG 59

Query: 77  LVTTVNSIGAAFQLVYIILFITYTEKDK 104
            +   N +G     +Y+ILFI Y  K  
Sbjct: 60  YIIIPNGVGCVLGTIYLILFIIYPPKKA 87


This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 191
KOG1623243 consensus Multitransmembrane protein [General func 99.96
PF0308387 MtN3_slv: Sugar efflux transporter for intercellul 99.87
KOG1623243 consensus Multitransmembrane protein [General func 99.57
COG409589 Uncharacterized conserved protein [Function unknow 99.2
PF0419361 PQ-loop: PQ loop repeat 98.08
TIGR00951220 2A43 Lysosomal Cystine Transporter. 96.67
smart0067932 CTNS Repeated motif present between transmembrane 94.22
TIGR00951220 2A43 Lysosomal Cystine Transporter. 90.78
PF03650119 MPC: Uncharacterised protein family (UPF0041); Int 89.95
KOG1589118 consensus Uncharacterized conserved protein [Funct 88.21
>KOG1623 consensus Multitransmembrane protein [General function prediction only] Back     alignment and domain information
Probab=99.96  E-value=3.5e-29  Score=211.48  Aligned_cols=147  Identities=43%  Similarity=0.725  Sum_probs=123.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHhcccCcccchhHHHHHHHHHHHHHHhcccccCCceEEEeeehhhhhhHH
Q 029590           11 TVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQL   90 (191)
Q Consensus        11 ~~~~~vvg~la~v~si~mflSPlp~~~~I~k~kst~~~s~~p~v~~~~n~~lWl~YGl~~l~~d~~~Ii~~N~~G~~l~~   90 (191)
                      +....++|..|+++++++|++|+|+++||+|+||+|++|..||+++++||.+|+.||  .+++||..++.+|++|+++++
T Consensus         3 ~~~~~l~~i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG--~~~~~d~llitIN~~G~~ie~   80 (243)
T KOG1623|consen    3 NVLLFLFGILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYG--LLKVHDYLLITINGIGLVIET   80 (243)
T ss_pred             chHHHHHHHHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhh--hhccCceEEEEEehhcHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999  566646889999999999999


Q ss_pred             HHhhhheeeccccccccccccccchhhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeeh
Q 029590           91 VYIILFITYTEKDKKVSYPFSHMHLVYCSGSAICSVNQFFPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFV  170 (191)
Q Consensus        91 ~yl~v~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (191)
                      +|+..|+.|+++|+...                              ......++.  +..+++++....++++.+.+.+
T Consensus        81 ~Yi~~f~~ya~~k~~~~------------------------------~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~l  128 (243)
T KOG1623|consen   81 VYISIFLYYAPKKKTVK------------------------------IVLALVLGV--IGLIILLTLLLFHDPERRVSVL  128 (243)
T ss_pred             HHHHHHheecCchheeE------------------------------eeehHHHHH--HHHHHHHHHHhcCCcceeeeee
Confidence            99999999999888531                              011111111  1222334556778899999999


Q ss_pred             hhHHHHHHHHHhhhchhhhhC
Q 029590          171 GLLSCAALISMFASPLFIIVR  191 (191)
Q Consensus       171 G~~~~~~~i~my~sPL~~~~~  191 (191)
                      |.+|++++++||||||+.||+
T Consensus       129 G~vc~~~nI~~~~sPL~~m~~  149 (243)
T KOG1623|consen  129 GIVCAVFNISMFAAPLSVIRK  149 (243)
T ss_pred             ehhhhhhhHHhhhccHHhhhh
Confidence            999999999999999999974



>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] Back     alignment and domain information
>KOG1623 consensus Multitransmembrane protein [General function prediction only] Back     alignment and domain information
>COG4095 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function Back     alignment and domain information
>KOG1589 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00