Citrus Sinensis ID: 029668

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Protein Sequence
MGKGNRSAAATAAAAAAFFLIMVSCIGSSSGQALAPGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSPGPASPGTQPPSGLAASPSNGNNDNAASGNAGSVLCLLVGLAVAFLI
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHcccccHHHHccccccccccccHHHHHHHHHHcccccccEEccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHcccHccHHEccccccccccccHHHHHHHHHccccHHHHHEEccccccccEEcHHHHHcccHHccccccccHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MGKGNRSAAATAAAAAAFFLIMVSCigsssgqalapgpsmafgpspspeddcltkvlNMSDClsyvtegsnvtvpdkpccpelaglvesnpiclcqllgknntygikIDITralklpsvcgvttppvnlcslagvpieaptgspgpaspgtqppsglaaspsngnndnaasgnaGSVLCLLVGLAVAFLI
Flexible Loop (DISEMBL)
MGKGNRSAAATAAAAAAFFLIMVSCIGSSSGQALAPGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTegsnvtvpdKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSPGPASPGTQPPSGLAASPSNGNNDNAASGNAGSVLCLLVGLAVAFLI
Low Complexity Region (SEG)
MGKGNRSaaataaaaaaFFLIMVSCIGSSSGQALAPGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEaptgspgpaspgtqppsgLaaspsngnndnaasgnagsVLCLLVGLAVAFLI
Disordered region (IsUnstruct)
***********AAAAAAFFLIMVSCIG************************CLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPI*************************************GSVLCLLVGLAVAFL*
Disordered Region (DISOPRED)
*************AAAAFFLIMVSCIGSSSGQAL*********************VLNMSDCLSYVT******VP**PCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVN*************************************************LCLLVGLAVAFLI
Disordered Region (DISEMBL)
***********AAAAAAFFLIMVSCIGSSSGQALAPGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAPT**********************GNNDNAASGNAGSVLCLLVGLAVAFLI
Disordered Region (DISPRO)
*******AAATAAAAAAFFLIMVSCIGSSSGQALAPGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGV**************************************AGSVLCLLVGLAVAFLI
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGKGNRSAAATAAAAAAFFLIMVSCIGSSSGQALAPGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSPGPASPGTQPPSGLAASPSNGNNDNAASGNAGSVLCLLVGLAVAFLI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	190	2.2.26 [Sep-21-2011]
Q9ZVC7	176	Xylogen-like protein 11 O	no	no	0.547	0.590	0.490	6e-19
Q8VYI9	182	Non-specific lipid-transf	no	no	0.684	0.714	0.361	2e-18
Q9ZQI8	169	Non-specific lipid-transf	no	no	0.6	0.674	0.388	1e-16
Q6ASY2	178	Non-specific lipid transf	no	no	0.452	0.483	0.377	1e-08
Q9C7F7	193	Uncharacterized GPI-ancho	no	no	0.721	0.709	0.258	5e-05

>sp|Q9ZVC7|XYP11_ARATH Xylogen-like protein 11 OS=Arabidopsis thaliana GN=XYP11 PE=1 SV=2

 Score = 94.0 bits (232), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 53/108 (49%), Positives = 71/108 (65%), Gaps = 4/108 (3%)

Query: 35  APGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICL 94
           AP P  A GPS SP + CL  +LN+SDC SYV  GSN   P+  CCPELAG+V+S+P C+
Sbjct: 25  APEPIAADGPS-SPVN-CLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQSSPECV 82

Query: 95  CQLLGKNNT--YGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAP 140
           C L G   +  +G+K+D  RA +L ++CGV  P  +LCS+ G P  +P
Sbjct: 83  CNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSLCSVLGFPTISP 130

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYI9|NLTL5_ARATH Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1

 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 76/130 (58%)

Query: 37  GPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQ 96
           G S     +P+P  DC T +LNM+DCLS+V+ G  V  P+  CC  L  +++++  CLC+
Sbjct: 28  GASHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCE 87

Query: 97  LLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSPGPASPGTQPPSG 156
               + + G+ ++IT+A  LP+ C +  P +  C L+  P  AP  +PG A+ G +    
Sbjct: 88  AFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAPGLAPGVAAAGPETAGF 147

Query: 157 LAASPSNGNN 166
           LA +PS+GN+
Sbjct: 148 LAPNPSSGND 157

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZQI8|NLTL2_ARATH Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1

 Score = 86.7 bits (213), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 7/121 (5%)

Query: 51  DCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDI 110
           DC + +LNM+DCLS+VT GS V  P+  CC  L  +V + P CLC+    + + G+ +D+
Sbjct: 26  DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTLDL 85

Query: 111 TRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSPGPASPGTQPPSGLAASPSNGNNDNAA 170
           ++A  LPSVC V  PP   C L      + +G P   +PG  P +G A +P+  +  NAA
Sbjct: 86  SKAASLPSVCKVAAPPSARCGL------SVSGDPPATAPGLSPTAG-AGAPALSSGANAA 138

Query: 171 S 171
           +
Sbjct: 139 T 139

Arabidopsis thaliana (taxid: 3702)

>sp|Q6ASY2|NLTL1_ORYSJ Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica GN=LTPL1 PE=1 SV=1

 Score = 60.1 bits (144), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 4/90 (4%)

Query: 44  PSPSPEDDCLTKVLNMSDCLSYVTEGSNV-TVPDKPCCPELAGLVESNPI--CLCQLLGK 100
           P+P+P  DC  + L ++DCL YVT G    + P K CC E+ G ++ +    CLC     
Sbjct: 32  PAPAPAVDCTAEALKLADCLDYVTPGKTAPSRPSKLCCGEVKGALKDSAAVGCLCAAF-T 90

Query: 101 NNTYGIKIDITRALKLPSVCGVTTPPVNLC 130
           + T  + I+ITRAL LP+ CG      + C
Sbjct: 91  SKTLPLPINITRALHLPAACGADASAFSKC 120

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C7F7|UGPI5_ARATH Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis thaliana GN=At1g27950 PE=1 SV=1

 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 18/155 (11%)

Query: 50  DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYG---- 105
           D+C      ++ CL + T     T+P K CC  +  + E +P CLC ++ +  T G    
Sbjct: 33  DECNQDFQKVTLCLDFAT--GKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALK 90

Query: 106 -IKIDITRALKLPSVCGVTTPPVNLC-SLAGVPIEAP-------TGSPGPASPGTQPPSG 156
            + +   + ++LP+ C +    +  C  L G+   +P         +  P +P  + P+ 
Sbjct: 91  DLGVQEDKLIQLPTSCQLHNASITNCPKLLGISPSSPDAAVFTNNATTTPVAPAGKSPAT 150

Query: 157 LAASPSNGNNDNAASGNAGSVLCLLVGL-AVAFLI 190
            A S   G + +A  G+A  V+ L V L AV+F++
Sbjct: 151 PATSTDKGGSASAKDGHA--VVALAVALMAVSFVL 183

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	190
255561236	211	lipid binding protein, putative [Ricinus	0.805	0.725	0.634	3e-45
223029867	196	non-specific lipid-transfer protein-like	0.868	0.841	0.488	6e-37
225436039	202	PREDICTED: non-specific lipid-transfer p	0.821	0.772	0.517	1e-33
388508148	200	unknown [Lotus japonicus]	0.715	0.68	0.535	2e-31
388496246	200	unknown [Lotus japonicus]	0.721	0.685	0.532	3e-31
449452718	180	PREDICTED: xylogen-like protein 11-like	0.868	0.916	0.497	3e-30
356574517	211	PREDICTED: non-specific lipid-transfer p	0.584	0.526	0.614	7e-30
351724697	216	uncharacterized protein LOC100306166 pre	0.584	0.513	0.608	7e-30
357462043	206	Non-specific lipid-transfer protein-like	0.684	0.631	0.544	3e-29
147827003	163	hypothetical protein VITISV_034012 [Viti	0.584	0.680	0.591	1e-28

>gi|255561236|ref|XP_002521629.1| lipid binding protein, putative [Ricinus communis] gi|223539141|gb|EEF40736.1| lipid binding protein, putative [Ricinus communis]

 Score =  186 bits (473), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/164 (63%), Positives = 120/164 (73%), Gaps = 11/164 (6%)

Query: 38  PSMAFGPS-PSP-EDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLC 95
           P M  GPS P P  +DCLT +LNMSDCLSYVTE SNVTVPDK CCPELAGL++ NPICLC
Sbjct: 45  PEMPLGPSAPGPATNDCLTPLLNMSDCLSYVTESSNVTVPDKNCCPELAGLLDGNPICLC 104

Query: 96  QLLGKNN---TYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAP---TGSPGP--- 146
           QLLG +N   +YG KID+ RALKLPS+C V+TPPV+LCS+AG P+  P     SP P   
Sbjct: 105 QLLGNSNLTESYGFKIDVNRALKLPSICRVSTPPVSLCSVAGYPVPGPIASEASPSPMDN 164

Query: 147 ASPGTQPPSGLAASPSNGNNDNAASGNAGSVLCLLVGLAVAFLI 190
            +PG  PP GLA+SPS GNN N ASG AGS     VGLA +FL+
Sbjct: 165 QTPGVAPPEGLASSPSTGNNGNGASGVAGSAQAFFVGLAFSFLL 208

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223029867|gb|ACM78615.1| non-specific lipid-transfer protein-like protein [Tamarix hispida]

 Score =  159 bits (401), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 88/180 (48%), Positives = 120/180 (66%), Gaps = 15/180 (8%)

Query: 20  LIMVSCIGSSSGQAL-APGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKP 78
           ++ V   G   G  + APGP++  G +    + C+T + NMSDCLSY  +GSN+T PDKP
Sbjct: 21  MVTVEVRGQDGGSVVGAPGPAVDSGGA----NHCITALTNMSDCLSYAEKGSNLTKPDKP 76

Query: 79  CCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIE 138
           CCPELAGLV+SNPICLC+LLGK ++YG++ID+ RALKLP  C V TPP+++CS  G+P+ 
Sbjct: 77  CCPELAGLVDSNPICLCELLGKGSSYGLQIDLNRALKLPETCKVDTPPISMCSTVGIPVG 136

Query: 139 APT-GSPGP-------ASPGTQPPSGLAASPSNGNNDNAASGNAGSVLCLLVGLAVAFLI 190
           APT  + GP       ++PG  P  G+AASP+  ++ N AS NA   L   VG  +A L+
Sbjct: 137 APTLSTEGPTGAMSESSAPGMSPTGGIAASPT--SSKNGASINARCGLMTFVGFGMALLL 194

Source: Tamarix hispida

Species: Tamarix hispida

Genus: Tamarix

Family: Tamaricaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436039|ref|XP_002275145.1| PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Vitis vinifera]

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/170 (51%), Positives = 113/170 (66%), Gaps = 14/170 (8%)

Query: 27  GSSSGQALAPGPSMAF-----GPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCP 81
           G SS   +AP P M       GP+P+  DDC+T VLNMSDCLSYV EGSNVTVPDKPCCP
Sbjct: 36  GPSSYAGIAPAPYMGMPPEPMGPAPA-ADDCVTNVLNMSDCLSYVAEGSNVTVPDKPCCP 94

Query: 82  ELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLC--SLAGVPIEA 139
           ELAGL++S+P+CLC LLG  +TYG+  ++T+AL LP VCGV TPP+++C  S  G P  +
Sbjct: 95  ELAGLLDSHPLCLCTLLGSASTYGV--NVTKALTLPGVCGVPTPPLSMCPGSPTGSPAGS 152

Query: 140 PTGSPGPASPGTQPPSGLAASPSNGNNDNAASGNAGSVLCLLVGLAVAFL 189
           P GSP   S G+ P   +A SP +         ++   L  L+GLA++FL
Sbjct: 153 PAGSPAGLSEGS-PTGSIAESPKSLGTSTIVESSS---LAFLLGLAISFL 198

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508148|gb|AFK42140.1| unknown [Lotus japonicus]

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/155 (53%), Positives = 102/155 (65%), Gaps = 19/155 (12%)

Query: 30  SGQALAPGPSMAFGPSPSPED-DCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVE 88
           S Q+LAP  + A    PSP   DC T + N+SDCL++V  GSN+T PDK CCPE AGL+E
Sbjct: 27  SAQSLAPESASA----PSPAGVDCFTALTNVSDCLTFVEAGSNLTKPDKGCCPEFAGLIE 82

Query: 89  SNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSPGPAS 148
           SNPICLCQLLGK +  GIKI++ +A+KLPSVCGV TPPV+ CS+ GVP+  P  S G A 
Sbjct: 83  SNPICLCQLLGKPDFVGIKINLNKAIKLPSVCGVDTPPVSTCSVIGVPVSLPPSSEGLA- 141

Query: 149 PGTQPPSGLAASPSNG--------NNDNAASGNAG 175
                P G A SPSN         ++D AA G +G
Sbjct: 142 -----PGGSATSPSNAPSSGGPSPSSDEAAVGTSG 171

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496246|gb|AFK36189.1| unknown [Lotus japonicus]

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/156 (53%), Positives = 103/156 (66%), Gaps = 19/156 (12%)

Query: 30  SGQALAPGPSMAFGPSPSPED-DCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVE 88
           S Q+LAP  + A    PSP   DC T + N+SDCL++V  GSN+T PDK CCPE AGL+E
Sbjct: 27  SAQSLAPESASA----PSPAGVDCFTALTNVSDCLTFVEAGSNLTKPDKGCCPEFAGLIE 82

Query: 89  SNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSPGPAS 148
           SNPICLCQLLGK +  GIKI++ +A+KLPSVCGV TPPV+ CS+ GVP+  P  S G A 
Sbjct: 83  SNPICLCQLLGKPDFVGIKINLNKAIKLPSVCGVDTPPVSTCSVIGVPVSLPPSSEGLA- 141

Query: 149 PGTQPPSGLAASPSNG--------NNDNAASGNAGS 176
                P G A SPSN         ++D AA G +G+
Sbjct: 142 -----PGGSATSPSNAPSSGGPSPSSDEAAVGTSGN 172

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452718|ref|XP_004144106.1| PREDICTED: xylogen-like protein 11-like [Cucumis sativus]

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/177 (49%), Positives = 111/177 (62%), Gaps = 12/177 (6%)

Query: 15  AAAFFLIMVSCIGSSSGQALAPGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTV 74
           A A  +IM   I   SGQA APGP  A G     E DC T +L MSDCL YVT GSN T 
Sbjct: 10  AVAVLVIMA--IEGISGQAPAPGPG-AVG-----EVDCFTTLLGMSDCLPYVTTGSNDTK 61

Query: 75  PDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAG 134
           P+K CC ELAGLVE++P CLC+LL   +  G  ID+ RA+KLP+ C V+TP ++LCSL G
Sbjct: 62  PNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLG 121

Query: 135 VPIEAPTGSPGPASPGTQPPS--GLAASPSNGNNDNAASGNAGSVLCLLVGLAVAFL 189
            P+ + + SP P SPG QPP   G + + + GN+ N AS      L   +GLA+AF+
Sbjct: 122 YPVGS-SNSPAP-SPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFI 176

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574517|ref|XP_003555393.1| PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Glycine max]

 Score =  135 bits (341), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 70/114 (61%), Positives = 90/114 (78%), Gaps = 3/114 (2%)

Query: 45  SPSPEDD-CLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNT 103
           +P+PE + CL  + NMSDCL+YV +GS ++ PDK CCPELAGLV+SNPICLC++LGK ++
Sbjct: 35  APAPESNGCLMALANMSDCLTYVEDGSKLSKPDKGCCPELAGLVDSNPICLCEMLGKPDS 94

Query: 104 YGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEA-PTGSPGPA-SPGTQPPS 155
            GIKID+ +ALKLPSVCGVTTPPV+ CS  GVP+   P+ S GP+ +PG   PS
Sbjct: 95  IGIKIDLNKALKLPSVCGVTTPPVSTCSAVGVPVSLPPSMSEGPSIAPGAFSPS 148

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724697|ref|NP_001238602.1| uncharacterized protein LOC100306166 precursor [Glycine max] gi|255627749|gb|ACU14219.1| unknown [Glycine max]

 Score =  135 bits (341), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 70/115 (60%), Positives = 86/115 (74%), Gaps = 4/115 (3%)

Query: 52  CLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDIT 111
           CL  + NMSDCL+YV +GS +  PDK CCPELAGL++SNPICLC+LLGK ++ GIKID+ 
Sbjct: 53  CLMALTNMSDCLTYVEDGSKLAKPDKGCCPELAGLIDSNPICLCELLGKPDSIGIKIDLN 112

Query: 112 RALKLPSVCGVTTPPVNLCSLAGVPIEA-PTGSPGPASPGTQPPSGLAASPSNGN 165
           +ALKLPSVCGVTTPPV+ CS  GVP+   P+ S G  SPG  P     +SPSN +
Sbjct: 113 KALKLPSVCGVTTPPVSTCSAVGVPVSLPPSMSEGSLSPGIAPG---VSSPSNTD 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357462043|ref|XP_003601303.1| Non-specific lipid-transfer protein-like protein [Medicago truncatula] gi|217069950|gb|ACJ83335.1| unknown [Medicago truncatula] gi|355490351|gb|AES71554.1| Non-specific lipid-transfer protein-like protein [Medicago truncatula] gi|388517453|gb|AFK46788.1| unknown [Medicago truncatula]

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/136 (54%), Positives = 96/136 (70%), Gaps = 6/136 (4%)

Query: 28  SSSGQALAPGPSMAFGPSPSPEDD-CLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGL 86
           S++  A +P P  A   +PSP DD CL  + NMSDCL++V +GS +T PDK CCPELAGL
Sbjct: 26  SAAALAQSPAPETAV-LAPSPADDGCLMALTNMSDCLTFVEDGSKLTKPDKGCCPELAGL 84

Query: 87  VESNPICLCQLLGKN--NTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSP 144
           ++ NPICLC+LLG N  +++GIKI++ +ALKLP++CGVTTPPV+ CS  GVP+  P    
Sbjct: 85  IDGNPICLCKLLGSNTADSFGIKINVNKALKLPTICGVTTPPVSACSAIGVPVSLPPSLS 144

Query: 145 GPA-SPGT-QPPSGLA 158
           G A SP     P GLA
Sbjct: 145 GDAMSPNMAMSPKGLA 160

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147827003|emb|CAN64411.1| hypothetical protein VITISV_034012 [Vitis vinifera]

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 87/120 (72%), Gaps = 9/120 (7%)

Query: 27  GSSSGQALAPGPSMAF-----GPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCP 81
           G SS   + P P M       GP+P+  DDC T VLNMSDCLSYV EGSNVTVPDKPCCP
Sbjct: 16  GPSSYXGIXPAPYMGMPPEPMGPAPA-ADDCXTNVLNMSDCLSYVAEGSNVTVPDKPCCP 74

Query: 82  ELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAPT 141
           ELAGL++S+P+CLC LLG  +TYG  +++T+AL LP VCGV TPP+++C +   PI  PT
Sbjct: 75  ELAGLLDSHPLCLCTLLGSASTYG--VNVTKALTLPGVCGVPTPPLSMCPVL-YPIPRPT 131

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	190
TAIR|locus:2101044	193	LTPG2 "glycosylphosphatidylino	0.594	0.585	0.532	5.2e-26
TAIR|locus:2059242	176	AT2G27130 [Arabidopsis thalian	0.605	0.653	0.458	7.8e-23
TAIR|locus:2043750	169	XYP2 "xylogen protein 2" [Arab	0.436	0.491	0.433	8.6e-17
TAIR|locus:2077001	170	AT3G22600 [Arabidopsis thalian	0.452	0.505	0.426	2.9e-16
TAIR|locus:2164411	182	XYP1 "xylogen protein 1" [Arab	0.605	0.631	0.333	2.9e-16
TAIR|locus:2039366	183	AT2G48130 [Arabidopsis thalian	0.457	0.475	0.366	1.1e-14
TAIR|locus:2034325	256	AT1G36150 [Arabidopsis thalian	0.557	0.414	0.357	2.3e-14
TAIR|locus:2138586	208	AT4G08670 [Arabidopsis thalian	0.505	0.461	0.367	3.8e-14
TAIR|locus:505006466	156	AT4G14815 [Arabidopsis thalian	0.431	0.525	0.388	1.6e-13
UNIPROTKB|Q6ASY2	178	LTPL1 "Non-specific lipid tran	0.494	0.528	0.404	3.4e-13

TAIR|locus:2101044 LTPG2 "glycosylphosphatidylinositol-anchored lipid protein transfer 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 65/122 (53%), Positives = 78/122 (63%)

Query:    20 LIMVSCIGSSSGQALAPGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVT--EGSNVTVPDK 77
             LI+ S  G  S Q +   PS   GPS +P  DC+  ++NM+ CLSYVT  EG     PDK
Sbjct:    11 LIVASLTGHVSAQ-MDMSPSS--GPSGAP--DCMANLMNMTGCLSYVTVGEGGGAAKPDK 65

Query:    78 PCCPELAGLVESNPICLCQLLGKNNT--YGIKIDITRALKLPSVCGVTTPPVNLCSLAGV 135
              CCP LAGLVES+P CLC LL  +     GIKID  +ALKLP VCGV TP  +LCSL G+
Sbjct:    66 TCCPALAGLVESSPQCLCYLLSGDMAAQLGIKIDKAKALKLPGVCGVITPDPSLCSLFGI 125

Query:   136 PI 137
             P+
Sbjct:   126 PV 127

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

TAIR|locus:2059242 AT2G27130 [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 55/120 (45%), Positives = 78/120 (65%)

Query:    20 LIMVSCIGSSSGQAL-APGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKP 78
             ++++  +   SGQ+  AP P  A GPS SP + CL  +LN+SDC SYV  GSN   P+  
Sbjct:     9 VLLLLFLSLCSGQSPPAPEPIAADGPS-SPVN-CLVSMLNVSDCFSYVQVGSNEIKPEAA 66

Query:    79 CCPELAGLVESNPICLCQLLGKNNT--YGIKIDITRALKLPSVCGVTTPPVNLCSLAGVP 136
             CCPELAG+V+S+P C+C L G   +  +G+K+D  RA +L ++CGV  P  +LCS+ G P
Sbjct:    67 CCPELAGMVQSSPECVCNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSLCSVLGFP 126

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2043750 XYP2 "xylogen protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 36/83 (43%), Positives = 52/83 (62%)

Query:    51 DCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDI 110
             DC + +LNM+DCLS+VT GS V  P+  CC  L  +V + P CLC+    + + G+ +D+
Sbjct:    26 DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTLDL 85

Query:   111 TRALKLPSVCGVTTPPVNLCSLA 133
             ++A  LPSVC V  PP   C L+
Sbjct:    86 SKAASLPSVCKVAAPPSARCGLS 108

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2077001 AT3G22600 [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 38/89 (42%), Positives = 58/89 (65%)

Query:    47 SPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLL-GKNNTYG 105
             S +  C   +++MS CL+Y+T   N T P++ CC +L+ +V+S+P CLCQ+L G  +  G
Sbjct:    23 SAQSSCTNALISMSPCLNYIT--GNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLG 80

Query:   106 IKIDITRALKLPSVCGVTTPPVNLCSLAG 134
             I ++ T+AL LP  C V TPPV+ C+  G
Sbjct:    81 INVNQTQALGLPRACNVQTPPVSRCNTGG 109

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2164411 XYP1 "xylogen protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 39/117 (33%), Positives = 65/117 (55%)

Query:    20 LIMVSCIGSSSGQALAPGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPC 79
             L ++  +  SS   L  G S     +P+P  DC T +LNM+DCLS+V+ G  V  P+  C
Sbjct:    13 LFLIVLLSLSSVSVL--GASHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTC 70

Query:    80 CPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVP 136
             C  L  +++++  CLC+    + + G+ ++IT+A  LP+ C +  P +  C L+  P
Sbjct:    71 CSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAP 127

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2039366 AT2G48130 [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 33/90 (36%), Positives = 53/90 (58%)

Query:    48 PEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKN-NTYGI 106
             P   C++ +  +S CLSY+T   N T P +PCC  L  +++S+P C+C  +       G+
Sbjct:    26 PSSSCVSTLTTLSPCLSYIT--GNSTTPSQPCCSRLDSVIKSSPQCICSAVNSPIPNIGL 83

Query:   107 KIDITRALKLPSVCGVTTPPVNLCSLAGVP 136
              I+ T+AL+LP+ C + TPP+  C+ A  P
Sbjct:    84 NINRTQALQLPNACNIQTPPLTQCNAATGP 113

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2034325 AT1G36150 [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 39/109 (35%), Positives = 58/109 (53%)

Query:    20 LIMVSCIGSSS--GQALAPGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDK 77
             L++ S +  ++  G    P PSMA  P PS   DC + + +M DCLS++T GS    P K
Sbjct:    12 LLLSSSLSDAADFGSPSQP-PSMAPTPQPSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTK 70

Query:    78 PCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPP 126
              CC  +  ++  +P CLC  L  +   G  +D T+AL +P +C V   P
Sbjct:    71 TCCVGVKTVLNYSPKCLCSALESSREMGFVLDDTKALAMPKICNVPIDP 119

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2138586 AT4G08670 [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 36/98 (36%), Positives = 53/98 (54%)

Query:    36 PGPSMAFGPSPSPED-DCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICL 94
             P  S    P+P P   DC T + +M DCL Y+  GSN T P+K CC  +  +++ NP C+
Sbjct:    31 PAKSPVGAPAPGPSSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCI 90

Query:    95 CQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSL 132
             C  L      GI+++ TRAL  P  C ++  P + C +
Sbjct:    91 CAGLVSAGEMGIELNSTRALATPKACKLSIAPPH-CGI 127

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010584 "pollen exine formation" evidence=RCA

TAIR|locus:505006466 AT4G14815 [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 33/85 (38%), Positives = 53/85 (62%)

Query:    47 SPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLL-GKNNTYG 105
             S +  C   +++M+ CLS++T+  N ++P + CC +LA +V  +  CLCQ+L G  +  G
Sbjct:    21 SAQSSCTNVLISMAPCLSFITQ--NTSLPSQQCCNQLAHVVRYSSECLCQVLDGGGSQLG 78

Query:   106 IKIDITRALKLPSVCGVTTPPVNLC 130
             I ++ T+AL LP  C V TPP + C
Sbjct:    79 INVNETQALALPKACHVETPPASRC 103

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

UNIPROTKB|Q6ASY2 LTPL1 "Non-specific lipid transfer protein-like 1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 40/99 (40%), Positives = 54/99 (54%)

Query:    41 AFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNV-TVPDKPCCPELAG-LVESNPI-CLCQL 97
             A  P+P+P  DC  + L ++DCL YVT G    + P K CC E+ G L +S  + CLC  
Sbjct:    29 ASSPAPAPAVDCTAEALKLADCLDYVTPGKTAPSRPSKLCCGEVKGALKDSAAVGCLCAA 88

Query:    98 LGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVP 136
                + T  + I+ITRAL LP+ CG      + C LA  P
Sbjct:    89 F-TSKTLPLPINITRALHLPAACGADASAFSKC-LAPAP 125

GO:0032578 "aleurone grain membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	190
cd00010	63	cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibit	3e-12
pfam14368	95	pfam14368, LTP_2, Probable lipid transfer	3e-09
pfam00234	74	pfam00234, Tryp_alpha_amyl, Protease inhibitor/see	4e-09
smart00499	79	smart00499, AAI, Plant lipid transfer protein / se	1e-07
cd04660	73	cd04660, nsLTP_like, nsLTP_like: Non-specific lipi	0.001

>gnl|CDD|237980 cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

 Score = 59.0 bits (143), Expect = 3e-12
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 59  MSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIK-IDITRALKLP 117
           ++ CLSY+T G+  T P   CC  L  +V+S+P CLC  L       +   + TRAL LP
Sbjct: 1   LAPCLSYLTGGA--TAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALP 58

Query: 118 SVCGV 122
           + CG+
Sbjct: 59  AACGL 63

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges. Length = 63

>gnl|CDD|222713 pfam14368, LTP_2, Probable lipid transfer

 Score = 51.7 bits (124), Expect = 3e-09
 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 4/94 (4%)

Query: 33  ALAPGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPI 92
           A+    + A  P+P+    C      +  CL Y         P   CC  L   V+++  
Sbjct: 3   AVLLASAAAAPPAPASAASCADS---LLPCLGYCYVNGTAA-PSPACCAALKAAVKADVP 58

Query: 93  CLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPP 126
           CLC L+      G  I++TRA+ LP  CG+T+PP
Sbjct: 59  CLCDLVTSPLAAGFGINLTRAVALPKACGLTSPP 92

The members of this family are probably involved in lipid transfer. The family has several highly conserved cysteines, paired in various ways. Length = 95

>gnl|CDD|215810 pfam00234, Tryp_alpha_amyl, Protease inhibitor/seed storage/LTP family

 Score = 50.6 bits (121), Expect = 4e-09
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 7/80 (8%)

Query: 52  CLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIK-IDI 110
           C   +L ++ C  Y+  G  V  P + CC +L  L      C C  + +    GI+ I+ 
Sbjct: 1   CGQVLLKLAPCAGYLQGGCQV--PSQQCCSQLRQL---QAQCRCTAI-RAIVLGIEGINP 54

Query: 111 TRALKLPSVCGVTTPPVNLC 130
             A  LPS+CGV  P    C
Sbjct: 55  QAAASLPSMCGVNVPYGIDC 74

This family is composed of trypsin-alpha amylase inhibitors, seed storage proteins and lipid transfer proteins from plants. Length = 74

>gnl|CDD|214698 smart00499, AAI, Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

 Score = 47.4 bits (112), Expect = 1e-07
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 52  CLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNN---TYGIKI 108
           C   +L ++ CLSY+  GS    P + CC +L GL   +  C C  L            +
Sbjct: 1   CGQVLLQLAPCLSYLVGGSRGAPPSQQCCSQLRGLN--SAQCRCLALRAAVLGILEIPGL 58

Query: 109 DITRALKLPSVCGVTTPPVN 128
           +   A  LPS CGV  P  +
Sbjct: 59  NAQNAASLPSACGVPPPYTD 78

Length = 79

>gnl|CDD|240018 cd04660, nsLTP_like, nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 5/71 (7%)

Query: 58  NMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLP 117
            +++C  YVT  +    P + CC  L     ++  CLC+         I  D  +A+ LP
Sbjct: 7   LLAECQPYVTGPNPPPPPSRECCAALRR---ADLPCLCRYKTSLVLQII--DPDKAVYLP 61

Query: 118 SVCGVTTPPVN 128
           + CG+  PP +
Sbjct: 62  AKCGLPLPPSS 72

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes. Length = 73

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	190
cd01960	89	nsLTP1 nsLTP1: Non-specific lipid-transfer protein	99.61
cd04660	73	nsLTP_like nsLTP_like: Non-specific lipid-transfer	99.57
PF14368	96	LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A	99.52
cd00010	63	AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI),	99.42
cd01959	66	nsLTP2 nsLTP2: Non-specific lipid-transfer protein	99.31
smart00499	79	AAI Plant lipid transfer protein / seed storage pr	99.06
PF00234	90	Tryp_alpha_amyl: Protease inhibitor/seed storage/L	98.58
PF14547	85	Hydrophob_seed: Hydrophobic seed protein	96.34
cd01958	85	HPS_like HPS_like: Hydrophobic Protein from Soybea	95.99

>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.61  E-value=4.3e-16  Score=114.58  Aligned_cols=79  Identities=32%  Similarity=0.634  Sum_probs=65.4

Q ss_pred             CCchhhhcccccCHHHHhCCCCCCCCChhhHHHHHhcccC-----CCccccccccCCCccCcc-CCHHHHhhhhcccCCC
Q 029668           50 DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVES-----NPICLCQLLGKNNTYGIK-IDITRALKLPSVCGVT  123 (190)
Q Consensus        50 ~~C~~~l~~L~pClpYvtggs~~~~PS~~CC~aLk~l~~~-----d~~CLC~~l~~~~~lg~~-In~trA~aLP~~CgV~  123 (190)
                      .+|.+++..|.||++|+++++  ..|++.||++++++++.     +++|+|+++++. ..++. ||.+|+++||++||++
T Consensus         1 ~~C~~v~~~l~~C~~y~~g~~--~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~-~~~~~~i~~~~a~~LP~~C~v~   77 (89)
T cd01960           1 ISCGQVTSLLAPCLGYLTGGG--PAPSPACCSGVKSLNGLAKTTADRQAACNCLKSA-AAGISGLNPGRAAGLPGKCGVS   77 (89)
T ss_pred             CCHHHHHhhHHhHHHHHhCCC--CCCChHHhhhhHHHhhccCCCCchhhhhhccccc-ccccCCCCHHHHHhChHhcccC
Confidence            479999999999999999865  57999999999999764     568899888775 22333 9999999999999999


Q ss_pred             CC----CCCCCC
Q 029668          124 TP----PVNLCS  131 (190)
Q Consensus       124 ~P----P~s~Cs  131 (190)
                      ++    +.+||+
T Consensus        78 ~~~~i~~~~dC~   89 (89)
T cd01960          78 IPYPISPSTDCS   89 (89)
T ss_pred             CCCCCCCCCCCC
Confidence            76    447774

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.

>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

Probab=99.57  E-value=2.1e-15  Score=107.84  Aligned_cols=73  Identities=30%  Similarity=0.664  Sum_probs=61.2

Q ss_pred             chhhhcccccCHHHHhCCCCCCCCChhhHHHHHhcccCCCccccccccCCCccCccCCHHHHhhhhcccCCCCCCCCCC
Q 029668           52 CLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLC  130 (190)
Q Consensus        52 C~~~l~~L~pClpYvtggs~~~~PS~~CC~aLk~l~~~d~~CLC~~l~~~~~lg~~In~trA~aLP~~CgV~~PP~s~C  130 (190)
                      |...+..|.+|++|++++++...|+..||++||++   +++|+|.+++.. .+. .||.+||++||++||+++++ ++|
T Consensus         1 C~~~~~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~---~~~C~C~~~~~~-~~~-~i~~~~a~~Lp~~Cgv~~p~-~~C   73 (73)
T cd04660           1 CNMDLDLLAECQPYVTGPNPPPPPSRECCAALRRA---DLPCLCRYKTSL-VLQ-IIDPDKAVYLPAKCGLPLPP-SSC   73 (73)
T ss_pred             CCCCHHHHHHHHHHHcCCCCCCCCCHHHHHHHHcC---CcCCEeeccCCC-ccc-ccCHHHHHHHHHHcCCCCCC-CCC
Confidence            66777889999999998653346999999999984   677999988764 333 49999999999999999988 877

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.

>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A

Probab=99.52  E-value=1.4e-15  Score=111.27  Aligned_cols=79  Identities=43%  Similarity=0.909  Sum_probs=50.9

Q ss_pred             CCCCchhhhcccccCHHHHhCCCCCCCCChhhHHHHHhcccCCCccccccccCCCccCccCCHHHHhhhhcccCCCCCCC
Q 029668           48 PEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPV  127 (190)
Q Consensus        48 ~~~~C~~~l~~L~pClpYvtggs~~~~PS~~CC~aLk~l~~~d~~CLC~~l~~~~~lg~~In~trA~aLP~~CgV~~PP~  127 (190)
                      ...+|.+.+....+|+.|++++   ..|+..||+++|++++.++.|||+++++....+++||.+|++.||++||++.++ 
T Consensus        18 ~~~~c~~~l~~c~~~~~~~~~~---~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~in~~~a~~Lp~~Cg~~~~~-   93 (96)
T PF14368_consen   18 CCCSCANSLLPCCPCLCYVTGG---PAPSAACCSALKSVVQADPPCLCQLLNSPGAPGFGINVTRALALPAACGVPVPP-   93 (96)
T ss_dssp             BTTB-HCCCCHH--HHHHHCC--------HHHHHHHCC----HCCHHHCCCC-CCHCHHCCTCHHHHHHHHHCTSS-S--
T ss_pred             CcchhHHHHhccccchhccCCC---CCCCHHHHHHHHHhccCCCCCHHHhcCccccccCCcCHHHHHHHHHHcCCCCCC-
Confidence            5578876654444558898853   489999999999998889999999999863245579999999999999999987 


Q ss_pred             CCC
Q 029668          128 NLC  130 (190)
Q Consensus       128 s~C  130 (190)
                      ++|
T Consensus        94 ~~C   96 (96)
T PF14368_consen   94 SKC   96 (96)
T ss_dssp             ---
T ss_pred             CCC
Confidence            776

>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

Probab=99.42  E-value=9.6e-14  Score=95.37  Aligned_cols=62  Identities=42%  Similarity=0.893  Sum_probs=52.0

Q ss_pred             cccCHHHHhCCCCCCCCChhhHHHHHhcccCCCccccccccCCCccCccC-CHHHHhhhhcccCC
Q 029668           59 MSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKI-DITRALKLPSVCGV  122 (190)
Q Consensus        59 L~pClpYvtggs~~~~PS~~CC~aLk~l~~~d~~CLC~~l~~~~~lg~~I-n~trA~aLP~~CgV  122 (190)
                      |+||++|+++++  ..|+..||++++++++.++.|+|+++++.......+ |.++++.||++|||
T Consensus         1 L~~C~~y~~~~~--~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~~~~~~~a~~LP~~Cgv   63 (63)
T cd00010           1 LAPCLSYLTGGA--TAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAACGL   63 (63)
T ss_pred             CcchHHHHcCCC--CCCChHHHHHHHHHHhcChhhHHHHHcCccccccCcccHHHHHhchHhcCC
Confidence            579999999764  579999999999999889999999999862111133 79999999999996

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.

>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.31  E-value=1.6e-12  Score=92.18  Aligned_cols=61  Identities=31%  Similarity=0.647  Sum_probs=52.6

Q ss_pred             cccccCHHHHhCCCCCCCCChhhHHHHHhcccCCCccccccccCCCccCccCCHHHHhhhhcccCCCCC
Q 029668           57 LNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTP  125 (190)
Q Consensus        57 ~~L~pClpYvtggs~~~~PS~~CC~aLk~l~~~d~~CLC~~l~~~~~lg~~In~trA~aLP~~CgV~~P  125 (190)
                      .+|.+|++|++++.   .|+.+||+.||+    +..|||+|++++ .++..||.++|+.|+++|||.+|
T Consensus         4 ~~L~~C~~ai~~~~---~Ps~~CC~~Lk~----~~~CLC~y~~~p-~l~~~i~~~~A~~l~~~Cgv~~P   64 (66)
T cd01959           4 TQLSPCLPAILGGS---PPSAACCAKLKE----QQSCLCQYAKNP-SLKQYVNSPNARKVLAACGVPYP   64 (66)
T ss_pred             hhcccCHHHHhCCC---CCCHHHHHHHhc----CCCCeeeeecCc-cHHhhcCcHHHHHHHHHcCCCCC
Confidence            47899999999753   799999999998    448999999886 44446999999999999999985

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp

>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

Probab=99.06  E-value=2.6e-10  Score=78.87  Aligned_cols=75  Identities=39%  Similarity=0.787  Sum_probs=59.5

Q ss_pred             chhhhcccccCHHHHhCCCCCCCCChhhHHHHHhcccCCCccccccccCCCccCc----cCCHHHHhhhhcccCCCCCCC
Q 029668           52 CLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGI----KIDITRALKLPSVCGVTTPPV  127 (190)
Q Consensus        52 C~~~l~~L~pClpYvtggs~~~~PS~~CC~aLk~l~~~d~~CLC~~l~~~~~lg~----~In~trA~aLP~~CgV~~PP~  127 (190)
                      |.+.+..+.+|++|+++......|+..||++++.+.  +..|+|..++.. ..+.    .+|..++..||+.||+..+. 
T Consensus         1 C~~~~~~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~--~~~C~C~~~~~~-~~~~~~~~~~~~~~a~~lp~~C~~~~~~-   76 (79)
T smart00499        1 CGQVLLQLAPCLSYLTGGSPGAPPSQQCCSQLRGLN--SAQCRCLALRAA-VLGILEIPGVNAQNAASLPSACGVPPPY-   76 (79)
T ss_pred             ChhhhhhHHhhHHHHcCCCCCCCCchHHHHHHHHhc--ccCCcchhhhcc-cccccchhhhhHHHHHhhHHhcCCCCCC-
Confidence            677788888999999975323578899999999986  788999998875 2222    25999999999999998753 


Q ss_pred             CCC
Q 029668          128 NLC  130 (190)
Q Consensus       128 s~C  130 (190)
                      +.|
T Consensus        77 ~~C   79 (79)
T smart00499       77 TDC   79 (79)
T ss_pred             CCC
Confidence            444

>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]

Probab=98.58  E-value=1.2e-09  Score=79.51  Aligned_cols=67  Identities=34%  Similarity=0.790  Sum_probs=53.5

Q ss_pred             ccccCHHHHhCCCCCCCCChhhHHHHHhcccCCCccccccccCC-Ccc---------CccCCHHHHhhhhcccCCCCCCC
Q 029668           58 NMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKN-NTY---------GIKIDITRALKLPSVCGVTTPPV  127 (190)
Q Consensus        58 ~L~pClpYvtggs~~~~PS~~CC~aLk~l~~~d~~CLC~~l~~~-~~l---------g~~In~trA~aLP~~CgV~~PP~  127 (190)
                      .|.+|..|++++.  ..|+..||++|+++   ++.|.|..++.. ...         ...++..+|..||+.|||.++. 
T Consensus        14 ~l~~c~~~~~~~~--~~~~~~CC~~L~~l---~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~~~~-   87 (90)
T PF00234_consen   14 RLSPCLPYLQGGC--QQPSQQCCQQLRQL---DPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVSPPY-   87 (90)
T ss_dssp             HHHGGHHHHTTSS--SHHHHHHHHHHHHH---HHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSSSSS-
T ss_pred             cccccHHHHhccc--ccchHHHhHHHHHH---hHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCCCCC-
Confidence            3899999999854  26889999999998   889999999864 110         1258999999999999999864 


Q ss_pred             CCC
Q 029668          128 NLC  130 (190)
Q Consensus       128 s~C  130 (190)
                      ++|
T Consensus        88 ~~C   90 (90)
T PF00234_consen   88 TDC   90 (90)
T ss_dssp             S-G
T ss_pred             CCC
Confidence            455

The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....

>PF14547 Hydrophob_seed: Hydrophobic seed protein

Probab=96.34  E-value=0.0016  Score=48.55  Aligned_cols=79  Identities=30%  Similarity=0.648  Sum_probs=54.2

Q ss_pred             chhhhcccccCHHHHh--CCCCCCCCChhhHHHHHhcccCC-CccccccccCCCccC-ccCCHHHH-hhhhcccCCCCCC
Q 029668           52 CLTKVLNMSDCLSYVT--EGSNVTVPDKPCCPELAGLVESN-PICLCQLLGKNNTYG-IKIDITRA-LKLPSVCGVTTPP  126 (190)
Q Consensus        52 C~~~l~~L~pClpYvt--ggs~~~~PS~~CC~aLk~l~~~d-~~CLC~~l~~~~~lg-~~In~trA-~aLP~~CgV~~PP  126 (190)
                      |-....+|.-|.+.+.  +......+..+||.-++++.+.| ..|||..++.. .++ +++|.... ..|-..||-..|+
T Consensus         2 CP~d~lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~-vlg~i~~~ipv~l~~lln~CGk~~p~   80 (85)
T PF14547_consen    2 CPRDALKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKAN-VLGLINVNIPVALNLLLNACGKTVPS   80 (85)
T ss_pred             CCCcchhhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhh-cccccccccccHHHHHHHHhCCcCcC
Confidence            4444456777888771  10111246789999999998876 57999999874 555 44444333 3677889999888


Q ss_pred             CCCCC
Q 029668          127 VNLCS  131 (190)
Q Consensus       127 ~s~Cs  131 (190)
                      .++|.
T Consensus        81 gf~C~   85 (85)
T PF14547_consen   81 GFTCP   85 (85)
T ss_pred             CCcCC
Confidence            88884

>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

Probab=95.99  E-value=0.0067  Score=45.28  Aligned_cols=79  Identities=33%  Similarity=0.688  Sum_probs=54.5

Q ss_pred             CchhhhcccccCHHHHhCCC--CCCCCChhhHHHHHhcccCC-CccccccccCCCccCccCCHHHHhh-hhcccCCCCCC
Q 029668           51 DCLTKVLNMSDCLSYVTEGS--NVTVPDKPCCPELAGLVESN-PICLCQLLGKNNTYGIKIDITRALK-LPSVCGVTTPP  126 (190)
Q Consensus        51 ~C~~~l~~L~pClpYvtggs--~~~~PS~~CC~aLk~l~~~d-~~CLC~~l~~~~~lg~~In~trA~a-LP~~CgV~~PP  126 (190)
                      .|-....+|--|.+-+..-.  ....|..+||.-++++.+.| ..|+|..+|.. .+|+++|..-.+. |-..||-..|+
T Consensus         3 ~CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan-~lgi~~~~pv~l~llln~CGk~~P~   81 (85)
T cd01958           3 TCPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKAN-ILGISINIPVALSLLLNSCGRNVPP   81 (85)
T ss_pred             CCCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeecc-ccCcccccChhHHHHHHHHcCcCCC
Confidence            35444456667777663210  11357789999999998886 57999999874 6676665555554 55679999888


Q ss_pred             CCCC
Q 029668          127 VNLC  130 (190)
Q Consensus       127 ~s~C  130 (190)
                      .++|
T Consensus        82 gf~C   85 (85)
T cd01958          82 GFTC   85 (85)
T ss_pred             CCcC
Confidence            7877

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	190
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	2e-05
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana} Length = 77

 Score = 40.1 bits (93), Expect = 2e-05
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 59  MSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPS 118
           +++C   V+   N T P +PCC  L     ++  CLC            +D   A  LP 
Sbjct: 12  LNECKPAVS-KENPTSPSQPCCTALQH---ADFACLCGYKNSPWLGSFGVDPELASALPK 67

Query: 119 VCGVTTPP 126
            CG+   P
Sbjct: 68  QCGLANAP 75

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A* Length = 93

 Score = 40.6 bits (95), Expect = 2e-05
 Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 7/80 (8%)

Query: 51  DCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVE-----SNPICLCQLLGKNNTYG 105
            C      ++ C+SY       + P   CC  +  L       ++    C  L       
Sbjct: 3   SCGQVASAIAPCISYAR--GQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGV 60

Query: 106 IKIDITRALKLPSVCGVTTP 125
             ++   A  +PS CGV+ P
Sbjct: 61  SGLNAGNAASIPSKCGVSIP 80

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 1e-04
 Identities = 34/172 (19%), Positives = 49/172 (28%), Gaps = 55/172 (31%)

Query: 40  MAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCP---------ELAGLVESN 90
           +      SPE      VL M   L Y  + +  +  D              EL  L++S 
Sbjct: 187 LNLKNCNSPET-----VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK 241

Query: 91  --PICL------------------CQLL----GKNNTYGIKIDITRALKLPSVCGVTTPP 126
               CL                  C++L     K  T  +    T  + L       TP 
Sbjct: 242 PYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD 301

Query: 127 VNL--------CSLAGVPIEAPTGSPGPASPGTQPPSGLAASPSNGNN--DN 168
                      C    +P E  T +P       +  S +A S  +G    DN
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTNP-------RRLSIIAESIRDGLATWDN 346

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	190
d1mida_	91	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	2e-13
d1fk5a_	93	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	7e-10

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 91

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score = 61.0 bits (148), Expect = 2e-13
 Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 51  DCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVES--NPICLCQLLGKNNTYGIKI 108
           +C      M  CL+YV  G   +        +L    +S  +   +C  L         +
Sbjct: 2   NCGQVDSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNL 61

Query: 109 DITRALKLPSVCGVTTP 125
           ++  A  +PS C V  P
Sbjct: 62  NLNNAASIPSKCNVNVP 78

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]} Length = 93

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

 Score = 51.8 bits (124), Expect = 7e-10
 Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 7/80 (8%)

Query: 51  DCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVE-----SNPICLCQLLGKNNTYG 105
            C      ++ C+SY     +   P   CC  +  L       ++    C  L       
Sbjct: 3   SCGQVASAIAPCISYARGQGSG--PSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGV 60

Query: 106 IKIDITRALKLPSVCGVTTP 125
             ++   A  +PS CGV+ P
Sbjct: 61  SGLNAGNAASIPSKCGVSIP 80

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	190
d1fk5a_	93	Plant non-specific lipid-transfer protein (ns-LTP,	99.8
d1mida_	91	Plant non-specific lipid-transfer protein (ns-LTP,	99.8
d1tuka1	67	Non-specific lipid-transfer protein homologue (ns-	99.11
d1l6ha_	69	Non-specific lipid-transfer protein homologue (ns-	99.05
d1hypa_	75	Soybean hydrophobic protein {Soybean (Glycine max)	96.68
g1pnb.1	106	Napin BNIb {Rape (Brassica napus) [TaxId: 3708]}	96.4
d1psya_	125	2S albumin RicC3 {Castor bean (Ricinus communis) [	96.31
d1s6da_	103	Methionine-rich 2S protein (albumin 8) {Common sun	93.7
d1hssa_	120	0.19 alpha-amylase inhibitor {Wheat (Triticum aest	88.44

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

Probab=99.80  E-value=1.2e-21  Score=117.02  Aligned_cols=83  Identities=23%  Similarity=0.455  Sum_probs=70.1

Q ss_pred             CCCCHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCC-----CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             99845411061047778728999999993128999823408-----9863250035888667667988985201214999
Q 029668           49 EDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVES-----NPICLCQLLGKNNTYGIKIDITRALKLPSVCGVT  123 (190)
Q Consensus        49 ~~~C~~~l~~LspCl~YVt~gs~~~~Ps~~CC~aLk~l~~~-----~~~CLC~~l~~~~~lg~~In~trA~~LP~~Cgv~  123 (190)
                      ..+|.+++..|+||++|+++++  ..|+..||+++++|++.     +++|+|+++++......+||.+|+..||+.||++
T Consensus         1 Ai~C~~v~~~l~pCl~Yltg~~--~~Ps~~CC~gv~~l~~~a~t~~dr~~lC~cl~~~~~~~~~in~~ra~~LP~~C~v~   78 (93)
T d1fk5a_           1 AISCGQVASAIAPCISYARGQG--SGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVS   78 (93)
T ss_dssp             CCCHHHHHHHHGGGHHHHTTCS--SSCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTCC
T ss_pred             CCCHHHHHHHHHHHHHHHHCCC--CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf             9888898877620098881899--99997356889999988257764889998265134556785889998335744789


Q ss_pred             CC----CCCCCCCC
Q ss_conf             99----98899989
Q 029668          124 TP----PVNLCSLA  133 (190)
Q Consensus       124 ~p----P~s~C~~~  133 (190)
                      ++    +.+||+++
T Consensus        79 l~~pis~~~dCs~i   92 (93)
T d1fk5a_          79 IPYTISTSTDCSRV   92 (93)
T ss_dssp             CSSCCSTTCCGGGC
T ss_pred             CCCCCCCCCCCCCC
T ss_conf             99998878887767

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.80  E-value=1.2e-21  Score=117.12  Aligned_cols=81  Identities=27%  Similarity=0.491  Sum_probs=68.7

Q ss_pred             CCCHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCC-----CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf             9845411061047778728999999993128999823408-----98632500358886676679889852012149999
Q 029668           50 DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVES-----NPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTT  124 (190)
Q Consensus        50 ~~C~~~l~~LspCl~YVt~gs~~~~Ps~~CC~aLk~l~~~-----~~~CLC~~l~~~~~lg~~In~trA~~LP~~Cgv~~  124 (190)
                      .+|.+++.+|+||++|+++++   +|+..||+++++|++.     +++|+|+++++.......||.+|+.+||++||+++
T Consensus         1 i~C~~v~~~l~pCl~Yl~g~~---~P~~~CC~gv~~L~~~a~t~~d~~~lC~cl~~~~~~~~~in~~ra~~LP~~C~v~~   77 (91)
T d1mida_           1 LNCGQVDSKMKPCLTYVQGGP---GPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNV   77 (91)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCS---CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHCCCC---CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCHHHCCCCC
T ss_conf             978889988875699981899---99930336599999880588869999883553143577869899981567448899


Q ss_pred             C----CCCCCCCC
Q ss_conf             9----98899989
Q 029668          125 P----PVNLCSLA  133 (190)
Q Consensus       125 p----P~s~C~~~  133 (190)
                      |    +.+||+++
T Consensus        78 p~pis~~~dC~~i   90 (91)
T d1mida_          78 PYTISPDIDCSRI   90 (91)
T ss_dssp             CSCCCTTCCGGGC
T ss_pred             CCCCCCCCCCCCC
T ss_conf             9998888888777

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

Probab=99.11  E-value=7.2e-12  Score=71.00  Aligned_cols=61  Identities=30%  Similarity=0.617  Sum_probs=54.4

Q ss_pred             CCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf             061047778728999999993128999823408986325003588866766798898520121499999
Q 029668           57 LNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTP  125 (190)
Q Consensus        57 ~~LspCl~YVt~gs~~~~Ps~~CC~aLk~l~~~~~~CLC~~l~~~~~lg~~In~trA~~LP~~Cgv~~p  125 (190)
                      ..|++|++.|++++   .|+..||..|++    +..|||+|++++ .+...||..++..+-..|||..|
T Consensus         5 ~~L~~C~~Ai~~g~---~PS~~CC~kLke----Q~~ClC~Y~kdP-~~~~yv~spnarkv~~aCgvp~P   65 (67)
T d1tuka1           5 SQLAVCASAILSGA---KPSGECCGNLRA----QQGCFCQYAKDP-TYGQYIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             GGGGGGHHHHHHCC---CCCHHHHHHHHH----HGGGHHHHTTCT-TTHHHHTSHHHHHHHHHTTCCCC
T ss_pred             HHCCCCHHHHHCCC---CCCHHHHHHHHH----CCCCCCEECCCC-CHHHHCCCHHHHHHHHHCCCCCC
T ss_conf             01332688885699---985999998984----487211012782-29987279989999996389899

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=99.05  E-value=7e-12  Score=71.08  Aligned_cols=64  Identities=28%  Similarity=0.669  Sum_probs=55.3

Q ss_pred             CHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf             45411061047778728999999993128999823408986325003588866766798898520121499999
Q 029668           52 CLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTP  125 (190)
Q Consensus        52 C~~~l~~LspCl~YVt~gs~~~~Ps~~CC~aLk~l~~~~~~CLC~~l~~~~~lg~~In~trA~~LP~~Cgv~~p  125 (190)
                      |...  .|++|++.|++++   .|+..||..||+    +..|||+|++++ .+...||..++..+-..|||..|
T Consensus         3 C~p~--~L~~C~~ai~~g~---~PS~~CC~kLke----Q~~ClC~Y~k~P-~~~~yv~spnarkv~~aCgvp~P   66 (69)
T d1l6ha_           3 CNAG--QLTVCTGAIAGGA---RPTAACCSSLRA----QQGCFCQFAKDP-RYGRYVNSPNARKAVSSCGIALP   66 (69)
T ss_dssp             STTT--THHHHHHHHTTCC---STTHHHHHHHHH----HHHHHHHHTTCS-SHHHHTTTTTGGGCCCCCSSCSC
T ss_pred             CCHH--HCCCCHHHHHCCC---CCCHHHHHHHHH----CCCCCCEECCCC-CHHHHCCCHHHHHHHHHCCCCCC
T ss_conf             8820--1243678884799---980999999985----387213022682-29887279989999996299998

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

Probab=96.68  E-value=0.00011  Score=37.23  Aligned_cols=68  Identities=28%  Similarity=0.623  Sum_probs=48.0

Q ss_pred             CCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCHHHHHH-HHCCCCCCCCCCCCCCC
Q ss_conf             610477787289999999931289998234089-8632500358886676679889852-01214999999889998
Q 029668           58 NMSDCLSYVTEGSNVTVPDKPCCPELAGLVESN-PICLCQLLGKNNTYGIKIDITRALK-LPSVCGVTTPPVNLCSL  132 (190)
Q Consensus        58 ~LspCl~YVt~gs~~~~Ps~~CC~aLk~l~~~~-~~CLC~~l~~~~~lg~~In~trA~~-LP~~Cgv~~pP~s~C~~  132 (190)
                      +|.-|.+-+.+.   ..+..+||.-++++.+.+ ..|||..++..   ++ +|....+. |-..||-..|+.++|..
T Consensus         5 Klg~C~nvLg~~---~~~~~~CC~Ll~GL~dleAAvCLCtaika~---~l-lnvpv~l~llln~Cgk~~P~gF~CP~   74 (75)
T d1hypa_           5 DLSICLNILGGS---LGTVDDCCALIGGLGDIEAIVCLCIQLRAL---GI-LNLNRNLQLILNSCGRSYPSNATCPR   74 (75)
T ss_dssp             CCGGGGGGGGTC---CTTHHHHHHHHHTSCHHHHHHHHHHHHHHH---TC-SCHHHHHHHHHHHTTCSSCCCCCCSC
T ss_pred             CHHHHHHHHCCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH---HH-CCCCCHHHHHHHHCCCCCCCCCCCCC
T ss_conf             404699986676---677788636876378889999999999986---31-41530099999981894909891899

>d1psya_ a.52.1.3 (A:) 2S albumin RicC3 {Castor bean (Ricinus communis) [TaxId: 3988]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: 2S albumin RicC3
species: Castor bean (Ricinus communis) [TaxId: 3988]

Probab=96.31  E-value=0.00053  Score=33.98  Aligned_cols=75  Identities=23%  Similarity=0.496  Sum_probs=50.1

Q ss_pred             CCCCCCHHHHC--CCCCCHHHHHCCCCCCCC--------C-----------HHHHHHHHHCCCCCCCCCCCCCCCC-CC-
Q ss_conf             99998454110--610477787289999999--------9-----------3128999823408986325003588-86-
Q 029668           47 SPEDDCLTKVL--NMSDCLSYVTEGSNVTVP--------D-----------KPCCPELAGLVESNPICLCQLLGKN-NT-  103 (190)
Q Consensus        47 ~~~~~C~~~l~--~LspCl~YVt~gs~~~~P--------s-----------~~CC~aLk~l~~~~~~CLC~~l~~~-~~-  103 (190)
                      .....|...+.  .|..|..||........+        .           ..||+.|+.+   ++.|-|..|... .. 
T Consensus        13 ~~~q~Crqe~q~q~L~sCq~Yl~qq~~~~~~~~~~~~~~~~~~~~~e~~~l~qCC~qL~q~---~~~CrC~~l~~~v~~~   89 (125)
T d1psya_          13 SSSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQ   89 (125)
T ss_dssp             SSSSSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC---CCCCCCHHHHHHHHHH
T ss_conf             8563477789765189999999999732478873112432112442417799999999848---9677689999999999


Q ss_pred             ---CCC-CCC----HHHHHHHHCCCCCCC
Q ss_conf             ---676-679----889852012149999
Q 029668          104 ---YGI-KID----ITRALKLPSVCGVTT  124 (190)
Q Consensus       104 ---lg~-~In----~trA~~LP~~Cgv~~  124 (190)
                         .++ .-+    +-+|..||..||+..
T Consensus        90 ~qq~~~~~~~~~~~~q~Ak~LPs~C~i~~  118 (125)
T d1psya_          90 IQQGQLHGEESERVAQRAGEIVSSCGVRC  118 (125)
T ss_dssp             HHHTTCCTTCSHHHHHHHHHHHHHHTCST
T ss_pred             HHHHHHHHHHHHHHHHHHHHCHHHCCCCC
T ss_conf             99887778999999999985714229950

>d1s6da_ a.52.1.3 (A:) Methionine-rich 2S protein (albumin 8) {Common sunflower (Helianthus annuus) [TaxId: 4232]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: Methionine-rich 2S protein (albumin 8)
species: Common sunflower (Helianthus annuus) [TaxId: 4232]

Probab=93.70  E-value=0.0053  Score=29.27  Aligned_cols=75  Identities=19%  Similarity=0.425  Sum_probs=49.7

Q ss_pred             CCCCCCHHHHC---CCCCCHHHHHCCC---CCCC------CC-HHHHHHHHHCCCCCCCCCCCCCCCC--CCCC---CCC
Q ss_conf             99998454110---6104777872899---9999------99-3128999823408986325003588--8667---667
Q 029668           47 SPEDDCLTKVL---NMSDCLSYVTEGS---NVTV------PD-KPCCPELAGLVESNPICLCQLLGKN--NTYG---IKI  108 (190)
Q Consensus        47 ~~~~~C~~~l~---~LspCl~YVt~gs---~~~~------Ps-~~CC~aLk~l~~~~~~CLC~~l~~~--~~lg---~~I  108 (190)
                      .....|...+.   .|..|..||....   ....      +. ..||+.|+.+   ++.|-|..|...  ...+   +.-
T Consensus         6 ~~~q~C~~q~q~qq~L~~Cq~Yl~q~~~~~~~~~~~~~~e~~~~~CC~qL~q~---~~~CrC~~L~~avq~q~~q~~~~~   82 (103)
T d1s6da_           6 RTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQ   82 (103)
T ss_dssp             CCSSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC---CCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             76342799999868589999999999860677787557568999999999808---977727799999998886899999


Q ss_pred             CHHHHHHHHCCCCCCC
Q ss_conf             9889852012149999
Q 029668          109 DITRALKLPSVCGVTT  124 (190)
Q Consensus       109 n~trA~~LP~~Cgv~~  124 (190)
                      -...|.+||..||+..
T Consensus        83 ~~q~Ak~LPs~C~i~P   98 (103)
T d1s6da_          83 VMSMAHNLPIECNLMS   98 (103)
T ss_dssp             HHHHHHHHHHHTTSSS
T ss_pred             HHHHHHHCHHHCCCCC
T ss_conf             9999985737329897

>d1hssa_ a.52.1.2 (A:) 0.19 alpha-amylase inhibitor {Wheat (Triticum aestivum) [TaxId: 4565]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Proteinase/alpha-amylase inhibitors
domain: 0.19 alpha-amylase inhibitor
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=88.44  E-value=0.063  Score=24.20  Aligned_cols=66  Identities=20%  Similarity=0.393  Sum_probs=41.3

Q ss_pred             CCCCCHHHHHCCCCCCCCC----HHHHHHHHHCCCCCCCCCCCCCCCC-C-C---CCC---------------CCCHHHH
Q ss_conf             6104777872899999999----3128999823408986325003588-8-6---676---------------6798898
Q 029668           58 NMSDCLSYVTEGSNVTVPD----KPCCPELAGLVESNPICLCQLLGKN-N-T---YGI---------------KIDITRA  113 (190)
Q Consensus        58 ~LspCl~YVt~gs~~~~Ps----~~CC~aLk~l~~~~~~CLC~~l~~~-~-~---lg~---------------~In~trA  113 (190)
                      -|..|..||..-.....++    ..||+.|..+   +..|-|+.|... + .   .+.               ......+
T Consensus        12 pL~~CR~yv~~q~~G~~~~~~~k~~CC~eLa~i---~~~CRCeALr~~~~~~~~e~G~~~g~~~~e~~PgC~re~~~~~a   88 (120)
T d1hssa_          12 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTA   88 (120)
T ss_dssp             CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS---CTTTHHHHHHHHHHHHHHHCCC---------STTCCHHHHHHHH
T ss_pred             CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             628889999998228998504899999999846---72151099999986112024787786544437899869999999


Q ss_pred             HHHHCCCCCCCCC
Q ss_conf             5201214999999
Q 029668          114 LKLPSVCGVTTPP  126 (190)
Q Consensus       114 ~~LP~~Cgv~~pP  126 (190)
                      ..||+.||+.++.
T Consensus        89 a~Lpa~CNl~tv~  101 (120)
T d1hssa_          89 ASITAVCRLPIVV  101 (120)
T ss_dssp             TTHHHHTTCCEEC
T ss_pred             HHCCCCCCCCCCC
T ss_conf             6066136888558