Citrus Sinensis ID: 029720

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDR
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHEEEEHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MEASLCTWSVFRSLLAILQWWVFNVTVIITNkwifqkldfkfplsVSCIHFICSSIGAYLVIKVLklkplitvepedrwrrifpMSFVFCINIVLGNVSLRYIPVSfmqtiksftPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDR
Flexible Loop (DISEMBL)
MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAEsllhsykfdr
Low Complexity Region (SEG)
MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYlvikvlklkpliTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDR
Disordered region (IsUnstruct)
****LCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSY****
Disordered Region (DISOPRED)
***********RSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL*HS*****
Disordered Region (DISEMBL)
MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDR
Disordered Region (DISPRO)
*****CTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	189	2.2.26 [Sep-21-2011]
Q9C521	336	UDP-galactose transporter	yes	no	0.952	0.535	0.955	7e-97
Q9SFE9	341	GDP-mannose transporter G	no	no	0.957	0.530	0.922	5e-95
Q6DBP3	309	Probable sugar phosphate/	no	no	0.952	0.582	0.338	5e-26
Q5XF09	308	Probable sugar phosphate/	no	no	0.888	0.545	0.339	3e-25
Q9FYE5	309	Probable sugar phosphate/	no	no	0.968	0.592	0.342	5e-24
Q9SS40	355	Probable sugar phosphate/	no	no	0.888	0.473	0.339	1e-22
Q9LDH3	361	Probable sugar phosphate/	no	no	0.767	0.401	0.337	7e-20
Q5VQL3	393	Phosphoenolpyruvate/phosp	no	no	0.846	0.407	0.321	4e-14
Q9M5A9	388	Glucose-6-phosphate/phosp	no	no	0.761	0.371	0.318	1e-13
P0CK96	405	Solute carrier family 35	yes	no	0.915	0.427	0.282	2e-13

>sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1

 Score =  352 bits (904), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 172/180 (95%), Positives = 176/180 (97%)

Query: 9   SVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLK 68
           S+FRSLLAILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICSSIGAY+VIKVLKLK
Sbjct: 5   SMFRSLLAILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLK 64

Query: 69  PLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 128
           PLI V+PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR
Sbjct: 65  PLIVVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 124

Query: 129 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFD 188
           KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLH YKFD
Sbjct: 125 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFD 184

UDP-galactose transporter that transports UDP-galactose, UDP-glucose and GDP-fucose.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1

 Score =  346 bits (888), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 167/181 (92%), Positives = 176/181 (97%)

Query: 8   WSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKL 67
           W++FRSLL+ILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICSSIGAY+VIKVLKL
Sbjct: 10  WTMFRSLLSILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKL 69

Query: 68  KPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVW 127
           KPLI V+PEDRWRRIFPMSFVFCINIVLGN+SLRYIPVSFMQTIKS TPATTVVLQWLVW
Sbjct: 70  KPLIVVDPEDRWRRIFPMSFVFCINIVLGNISLRYIPVSFMQTIKSLTPATTVVLQWLVW 129

Query: 128 RKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKF 187
           RKYFDWRIWASLVPIVGGILLTS+TELSFN+FGFCAALFGCLATSTKTILAESLLH YKF
Sbjct: 130 RKYFDWRIWASLVPIVGGILLTSITELSFNVFGFCAALFGCLATSTKTILAESLLHGYKF 189

Query: 188 D 188
           D
Sbjct: 190 D 190

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBP3|PT505_ARATH Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1

 Score =  117 bits (292), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 106/180 (58%)

Query: 5   LCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKV 64
           + T   F ++  +  W+  N+ V++ NK++     FK+P+ ++  H    S+ +Y+ I  
Sbjct: 3   MATNGRFFTIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAW 62

Query: 65  LKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQW 124
           LK+ P+ T+    ++ +I  +S VFC+++V GN+SLR++PVSF Q I + TP  T V  +
Sbjct: 63  LKMVPMQTIRSRVQFFKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAY 122

Query: 125 LVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS 184
           L+ RK   W  + +LVP+V G+++ S  E SF++FGF   +    A + K++L   LL S
Sbjct: 123 LMTRKKEAWLTYFTLVPVVTGVVIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 182

Arabidopsis thaliana (taxid: 3702)

>sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1

 Score =  114 bits (285), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 101/168 (60%)

Query: 17  ILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPE 76
           +  W+  N+ V++ NK++     FK+P+ ++  H    S+ +Y+ I  +K+ P+ T+   
Sbjct: 15  VASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKMVPMQTIRSR 74

Query: 77  DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIW 136
            ++ +I  +S VFC+++V GN+SLR++PVSF Q I + TP  T V  +L+  K   W  +
Sbjct: 75  VQFLKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLITFKREAWLTY 134

Query: 137 ASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS 184
            +LVP+V G+++ S +E SF++FGF   +    A + K++L   LL S
Sbjct: 135 FTLVPVVTGVVIASGSEPSFHLFGFIMCIAATAARALKSVLQGILLSS 182

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FYE5|PT504_ARATH Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1

 Score =  110 bits (275), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 106/184 (57%), Gaps = 1/184 (0%)

Query: 1   MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYL 60
           M +S    ++F S L I+ W+  N+ V++ NK++     FKFP+ ++  H    +I +Y+
Sbjct: 1   MSSSAKKQTLFISTL-IISWYSSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYI 59

Query: 61  VIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTV 120
            I  LKL PL  ++   ++ ++  +S VFC ++V GN+SLRY+PVSF Q + + TP  T 
Sbjct: 60  SIVFLKLVPLQHLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTA 119

Query: 121 VLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAES 180
           +  +L+  K   W  + +LVP+V G+++ S  E  F+ FGF   +    A + K++L   
Sbjct: 120 LFAYLMTFKREAWVTYGALVPVVAGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGI 179

Query: 181 LLHS 184
           LL S
Sbjct: 180 LLSS 183

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SS40|PT310_ARATH Probable sugar phosphate/phosphate translocator At3g10290 OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1

 Score =  106 bits (264), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 98/168 (58%)

Query: 17  ILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPE 76
           I+ W+  N+ V++ NK++     FKFP+ ++  H    +I +Y+ I  LKL PL  ++  
Sbjct: 62  IILWYTSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYVSIVFLKLVPLQYLKSR 121

Query: 77  DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIW 136
            ++ ++  +S VFC ++V GN+SLRY+PVSF Q + + TP  T +  +++  K   W  +
Sbjct: 122 SQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYIMTFKREAWVTY 181

Query: 137 ASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS 184
            +LVP+V G+++ S  E  F+ FGF   +    A + K++L   LL S
Sbjct: 182 GALVPVVTGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSS 229

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=2 SV=1

 Score = 97.1 bits (240), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 86/145 (59%)

Query: 17  ILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPE 76
           I  W+  N+ V++ NK++     F++P+ ++  H +  +  +  VI +  + P   +   
Sbjct: 63  IAAWFGSNIGVLLLNKYLLFYYGFRYPIFLTMTHMLSCAAYSSAVINIAGIVPRQHILSR 122

Query: 77  DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIW 136
            ++ +I  +S +FC+++V GN SLRYIPVSF Q I + TP  T V  +L+  K     ++
Sbjct: 123 RQFLKILSLSAIFCLSVVCGNTSLRYIPVSFNQAIGATTPFFTAVFSFLITCKTESTEVY 182

Query: 137 ASLVPIVGGILLTSVTELSFNMFGF 161
            +L+P+V GI+L S +E SF++FGF
Sbjct: 183 LALLPVVSGIVLASNSEPSFHLFGF 207

Arabidopsis thaliana (taxid: 3702)

>sp|Q5VQL3|PPT3_ORYSJ Phosphoenolpyruvate/phosphate translocator 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT3 PE=2 SV=1

 Score = 77.8 bits (190), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 8/168 (4%)

Query: 17  ILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKV--LKLKPLITVE 74
           I+ W++ N+   I NK + Q L F + ++   + F     G++++  +  LKL P   + 
Sbjct: 99  IVAWYLLNIYFNIYNKQVLQPLPFPYTITAFQLAF-----GSFVIFLMWALKLHPAPRIS 153

Query: 75  PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWR 134
              +  +I P++    +  V  N+SL  + VSF  TIK+  P  TV+L      +     
Sbjct: 154 -ISQLAKIAPLAAGHMLGTVFTNMSLSKVAVSFTHTIKASEPFFTVLLSAFFLGETPSLL 212

Query: 135 IWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLL 182
           +  SLVPIVGG+ L S+TELSFN  GF +A+   L   ++ +L++ LL
Sbjct: 213 VLGSLVPIVGGVALASLTELSFNWIGFWSAMASNLLYQSRNVLSKKLL 260

Phosphoenolpyruvate/phosphate translocator that transports phosphoenolpyruvate (PEP) and dihydroxyacetone phosphate.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9M5A9|GPT1_ARATH Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1

 Score = 76.3 bits (186), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 20  WWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPE--- 76
           WW  NV   I NK +     + +P   S +     S+ A  ++ ++     I   P+   
Sbjct: 104 WWALNVVFNIYNKKVLNA--YPYPWLTSTL-----SLAAGSLMMLISWAVGIVETPKTDF 156

Query: 77  DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIW 136
           D W+ +FP++    I  V   VS+  + VSF   IKS  PA +V++   +  + F   ++
Sbjct: 157 DFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPTSVY 216

Query: 137 ASLVPIVGGILLTSVTELSFNMFGFCAALFGCLA 170
            SL+PI+GG  L+++TEL+FNM GF  A+   LA
Sbjct: 217 LSLIPIIGGCALSALTELNFNMIGFMGAMISNLA 250

Glucose 6-phosphate (Glc6P) transporter. Transports also inorganic phosphate, 3-phosphoglycerate, triose phosphates and, to a leser extent, phosphoenolpyruvate. Responsible for the transport of Glc6P into plastids of heterotrophic tissues where it can be used as a carbon source for starch biosynthesis, as substrate for fatty acid biosynthesis or as substrate for NADPH generation via the oxidative pentose phosphate pathway (OPPP). Required for pollen maturation and embryo sac development.

Arabidopsis thaliana (taxid: 3702)

>sp|P0CK96|S352B_HUMAN Solute carrier family 35 member E2B OS=Homo sapiens GN=SLC35E2B PE=2 SV=1

 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 25/198 (12%)

Query: 3   ASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVI 62
           + L  WS  R+LL +  W+ F+   +  NK+I   L  + P  +  +  + ++     VI
Sbjct: 66  SDLGVWSS-RALLYLTLWFFFSFCTLFLNKYILSLLGGE-PSMLGAVQMLSTT-----VI 118

Query: 63  KVLKLKPLITVEP----EDRWRRIFPMSFVFCI---------NIVLGNVSLRYIPVSFMQ 109
             +K     T+ P    + + R  +P +F+  +          +VLG VSL+ + VSF +
Sbjct: 119 GCVK-----TLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAE 173

Query: 110 TIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCL 169
           T+KS  P  TV++  ++  +Y    +  SL+P++GG+ L + TE+SFN+ GF AAL   +
Sbjct: 174 TVKSSAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNI 233

Query: 170 ATSTKTILAESLLHSYKF 187
               + + ++ LL   K+
Sbjct: 234 MDCLQNVFSKKLLSGDKY 251

Putative transporter.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
255550574	342	conserved hypothetical protein [Ricinus	0.989	0.546	0.935	3e-98
225459544	340	PREDICTED: UDP-galactose transporter 1 i	0.989	0.55	0.935	3e-97
356552668	342	PREDICTED: UDP-galactose transporter 1-l	0.989	0.546	0.925	2e-96
357438617	342	Solute carrier family 35 member E3 [Medi	0.989	0.546	0.919	2e-96
356549087	342	PREDICTED: UDP-galactose transporter 1-l	0.989	0.546	0.925	2e-96
224084874	342	predicted protein [Populus trichocarpa]	0.989	0.546	0.930	3e-96
358248912	345	uncharacterized protein LOC100778350 [Gl	0.994	0.544	0.925	7e-96
356509420	345	PREDICTED: UDP-galactose transporter 1-l	0.994	0.544	0.920	1e-95
388508342	342	unknown [Medicago truncatula]	0.989	0.546	0.914	1e-95
297789749	336	hypothetical protein ARALYDRAFT_497286 [	0.952	0.535	0.961	2e-95

>gi|255550574|ref|XP_002516337.1| conserved hypothetical protein [Ricinus communis] gi|223544567|gb|EEF46084.1| conserved hypothetical protein [Ricinus communis]

 Score =  362 bits (930), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 175/187 (93%), Positives = 181/187 (96%)

Query: 2   EASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLV 61
           E+ LC WSVFRSLLAI+QWWVFNVTVII NKWIFQKLDFKFPL+VSC+HFICSSIGAYL 
Sbjct: 3   ESVLCQWSVFRSLLAIIQWWVFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSSIGAYLA 62

Query: 62  IKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 121
           IKVLKLKPLI V+PEDRWRRIFPMSFVFC+NIVLGNVSLRYIPVSFMQTIKSFTPATTVV
Sbjct: 63  IKVLKLKPLIVVDPEDRWRRIFPMSFVFCVNIVLGNVSLRYIPVSFMQTIKSFTPATTVV 122

Query: 122 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 181
           LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL
Sbjct: 123 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 182

Query: 182 LHSYKFD 188
           LH YKFD
Sbjct: 183 LHGYKFD 189

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459544|ref|XP_002285850.1| PREDICTED: UDP-galactose transporter 1 isoform 1 [Vitis vinifera] gi|225459546|ref|XP_002285851.1| PREDICTED: UDP-galactose transporter 1 isoform 2 [Vitis vinifera] gi|147794987|emb|CAN67423.1| hypothetical protein VITISV_006650 [Vitis vinifera] gi|302141824|emb|CBI19027.3| unnamed protein product [Vitis vinifera]

 Score =  359 bits (921), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 175/187 (93%), Positives = 180/187 (96%)

Query: 2   EASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLV 61
           E+ LC WS FRSLLAILQWW FNVTVII NKWIFQKLDFKFPLSVSCIHFICS+IGAYLV
Sbjct: 3   ESLLCQWSAFRSLLAILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCIHFICSAIGAYLV 62

Query: 62  IKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 121
           IKVLKLKPLI V+PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV
Sbjct: 63  IKVLKLKPLIVVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 122

Query: 122 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 181
           LQW+VWRKYF+WRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL
Sbjct: 123 LQWMVWRKYFEWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 182

Query: 182 LHSYKFD 188
           LH YKFD
Sbjct: 183 LHGYKFD 189

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552668|ref|XP_003544685.1| PREDICTED: UDP-galactose transporter 1-like [Glycine max]

 Score =  357 bits (915), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 173/187 (92%), Positives = 178/187 (95%)

Query: 2   EASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLV 61
           E  +C WSVFRSLLAILQWW FNVTVII NKWIFQKLDFKFPLSVSCIHFICS+IG Y+V
Sbjct: 3   EGVICQWSVFRSLLAILQWWAFNVTVIIINKWIFQKLDFKFPLSVSCIHFICSAIGGYVV 62

Query: 62  IKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 121
           IKVLKLKPLITV+PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV
Sbjct: 63  IKVLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 122

Query: 122 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 181
           LQWLVWRKYFDWRIWASL+PIVGGILLTSVTELSFN FGFCAAL GCLATSTKTILAESL
Sbjct: 123 LQWLVWRKYFDWRIWASLIPIVGGILLTSVTELSFNAFGFCAALLGCLATSTKTILAESL 182

Query: 182 LHSYKFD 188
           LH YKFD
Sbjct: 183 LHGYKFD 189

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357438617|ref|XP_003589584.1| Solute carrier family 35 member E3 [Medicago truncatula] gi|355478632|gb|AES59835.1| Solute carrier family 35 member E3 [Medicago truncatula]

 Score =  356 bits (914), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 172/187 (91%), Positives = 180/187 (96%)

Query: 2   EASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLV 61
           E  +C WSV RSLLAILQWW FNVTVII NKWIFQKLDFKFPLSVSCIHFICS+IGAY+V
Sbjct: 3   EGLVCQWSVVRSLLAILQWWAFNVTVIIMNKWIFQKLDFKFPLSVSCIHFICSAIGAYVV 62

Query: 62  IKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 121
           IKVLKLKPLI+V+P+DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV
Sbjct: 63  IKVLKLKPLISVDPQDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 122

Query: 122 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 181
           LQWLVWRKYFDWRIWASLVPIVGGILLTS+TELSFNMFGFCAALFGCLATSTKTILAE+L
Sbjct: 123 LQWLVWRKYFDWRIWASLVPIVGGILLTSITELSFNMFGFCAALFGCLATSTKTILAEAL 182

Query: 182 LHSYKFD 188
           LH YKFD
Sbjct: 183 LHGYKFD 189

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549087|ref|XP_003542929.1| PREDICTED: UDP-galactose transporter 1-like [Glycine max]

 Score =  356 bits (914), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 173/187 (92%), Positives = 178/187 (95%)

Query: 2   EASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLV 61
           E  +C WSVFRSLLAILQWW FNVTVII NKWIFQKLDFKFPLSVSCIHFICS+IG Y+V
Sbjct: 3   EEVICQWSVFRSLLAILQWWAFNVTVIIINKWIFQKLDFKFPLSVSCIHFICSAIGGYVV 62

Query: 62  IKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 121
           IKVLKLKPLITV+PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV
Sbjct: 63  IKVLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 122

Query: 122 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 181
           LQWLVWRKYFDWRIWASL+PIVGGILLTSVTELSFN FGFCAAL GCLATSTKTILAESL
Sbjct: 123 LQWLVWRKYFDWRIWASLIPIVGGILLTSVTELSFNAFGFCAALLGCLATSTKTILAESL 182

Query: 182 LHSYKFD 188
           LH YKFD
Sbjct: 183 LHGYKFD 189

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084874|ref|XP_002307432.1| predicted protein [Populus trichocarpa] gi|118483791|gb|ABK93788.1| unknown [Populus trichocarpa] gi|222856881|gb|EEE94428.1| predicted protein [Populus trichocarpa]

 Score =  355 bits (912), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 174/187 (93%), Positives = 180/187 (96%)

Query: 2   EASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLV 61
           E+ +  WSVFRSLLAILQWW FNVTVII NKWIFQKLDFKFPL+VSCIHFICSSIGAY+V
Sbjct: 3   ESVIFQWSVFRSLLAILQWWGFNVTVIIMNKWIFQKLDFKFPLTVSCIHFICSSIGAYVV 62

Query: 62  IKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 121
           IKVLK+KPLI VEPEDRWRRIFPMSFVFCINIVLGNVSLR+IPVSFMQTIKSFTPATTVV
Sbjct: 63  IKVLKIKPLIVVEPEDRWRRIFPMSFVFCINIVLGNVSLRFIPVSFMQTIKSFTPATTVV 122

Query: 122 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 181
           LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL
Sbjct: 123 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 182

Query: 182 LHSYKFD 188
           LH YKFD
Sbjct: 183 LHGYKFD 189

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248912|ref|NP_001240217.1| uncharacterized protein LOC100778350 [Glycine max] gi|255644617|gb|ACU22811.1| unknown [Glycine max]

 Score =  355 bits (910), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 175/189 (92%), Positives = 180/189 (95%), Gaps = 1/189 (0%)

Query: 1   MEASLC-TWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAY 59
           ME S    WSV RSLL+ILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICSSIGAY
Sbjct: 1   MEESFVFQWSVIRSLLSILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSSIGAY 60

Query: 60  LVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT 119
           +VIK+LKLKPLITV+PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT
Sbjct: 61  VVIKLLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT 120

Query: 120 VVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAE 179
           VVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAE
Sbjct: 121 VVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAE 180

Query: 180 SLLHSYKFD 188
           SLLH YKFD
Sbjct: 181 SLLHGYKFD 189

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509420|ref|XP_003523447.1| PREDICTED: UDP-galactose transporter 1-like [Glycine max]

 Score =  354 bits (908), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 174/189 (92%), Positives = 180/189 (95%), Gaps = 1/189 (0%)

Query: 1   MEASLC-TWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAY 59
           ME S    WSV RSLL+ILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICSSIGAY
Sbjct: 1   MEESFVFQWSVIRSLLSILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSSIGAY 60

Query: 60  LVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT 119
           +VIK+LKLKPLITV+PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT
Sbjct: 61  VVIKLLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT 120

Query: 120 VVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAE 179
           VVLQWLVWRKYFDWRIWASL+PIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAE
Sbjct: 121 VVLQWLVWRKYFDWRIWASLIPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAE 180

Query: 180 SLLHSYKFD 188
           SLLH YKFD
Sbjct: 181 SLLHGYKFD 189

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508342|gb|AFK42237.1| unknown [Medicago truncatula]

 Score =  354 bits (908), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 171/187 (91%), Positives = 179/187 (95%)

Query: 2   EASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLV 61
           E  +C WSV RSLLAILQWW FNVTVII NKWIFQK DFKFPLSVSCIHFICS+IGAY+V
Sbjct: 3   EGLVCQWSVVRSLLAILQWWAFNVTVIIMNKWIFQKSDFKFPLSVSCIHFICSAIGAYVV 62

Query: 62  IKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 121
           IKVLKLKPLI+V+P+DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV
Sbjct: 63  IKVLKLKPLISVDPQDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 122

Query: 122 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 181
           LQWLVWRKYFDWRIWASLVPIVGGILLTS+TELSFNMFGFCAALFGCLATSTKTILAE+L
Sbjct: 123 LQWLVWRKYFDWRIWASLVPIVGGILLTSITELSFNMFGFCAALFGCLATSTKTILAEAL 182

Query: 182 LHSYKFD 188
           LH YKFD
Sbjct: 183 LHGYKFD 189

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297789749|ref|XP_002862808.1| hypothetical protein ARALYDRAFT_497286 [Arabidopsis lyrata subsp. lyrata] gi|297308543|gb|EFH39066.1| hypothetical protein ARALYDRAFT_497286 [Arabidopsis lyrata subsp. lyrata]

 Score =  353 bits (906), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 173/180 (96%), Positives = 176/180 (97%)

Query: 9   SVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLK 68
           S+FRSLLAILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICSSIGAY+VIKVLKLK
Sbjct: 5   SMFRSLLAILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLK 64

Query: 69  PLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 128
           PLI VEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR
Sbjct: 65  PLIVVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 124

Query: 129 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFD 188
           KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLH YKFD
Sbjct: 125 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFD 184

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
TAIR|locus:2204690	336	AT1G77610 [Arabidopsis thalian	0.952	0.535	0.894	6.2e-85
TAIR|locus:2201138	341	GONST5 "golgi nucleotide sugar	0.989	0.548	0.845	2.7e-84
DICTYBASE|DDB_G0287319	348	DDB_G0287319 "TPT transporter	0.878	0.477	0.36	7.6e-25
TAIR|locus:2166384	309	AT5G05820 [Arabidopsis thalian	0.920	0.563	0.321	2e-24
TAIR|locus:2074713	308	AT3G11320 [Arabidopsis thalian	0.920	0.564	0.316	3.3e-24
TAIR|locus:2146683	309	AT5G04160 "AT5G04160" [Arabido	0.968	0.592	0.309	1.3e-22
TAIR|locus:2076239	355	AT3G10290 [Arabidopsis thalian	0.925	0.492	0.312	4.3e-22
TAIR|locus:2034730	361	AT1G12500 [Arabidopsis thalian	0.878	0.459	0.305	1.5e-19
UNIPROTKB|F1PZV1	405	SLC35E2B "Uncharacterized prot	0.973	0.454	0.282	1.5e-15
UNIPROTKB|P0CK96	405	SLC35E2B "Solute carrier famil	0.973	0.454	0.282	1.5e-15

TAIR|locus:2204690 AT1G77610 [Arabidopsis thaliana (taxid:3702)]

 Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
 Identities = 161/180 (89%), Positives = 164/180 (91%)

Query:     9 SVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYXXXXXXXXX 68
             S+FRSLLAILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICSSIGAY         
Sbjct:     5 SMFRSLLAILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLK 64

Query:    69 XXXTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 128
                 V+PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR
Sbjct:    65 PLIVVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 124

Query:   129 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFD 188
             KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLH YKFD
Sbjct:   125 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFD 184

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005457 "GDP-fucose transmembrane transporter activity" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0015783 "GDP-fucose transport" evidence=IDA

GO:0015786 "UDP-glucose transport" evidence=IDA

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2201138 GONST5 "golgi nucleotide sugar transporter 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
 Identities = 159/188 (84%), Positives = 167/188 (88%)

Query:     2 EASLCT-WSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYX 60
             E SL   W++FRSLL+ILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICSSIGAY 
Sbjct:     3 EGSLWRQWTMFRSLLSILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYI 62

Query:    61 XXXXXXXXXXXTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTV 120
                         V+PEDRWRRIFPMSFVFCINIVLGN+SLRYIPVSFMQTIKS TPATTV
Sbjct:    63 VIKVLKLKPLIVVDPEDRWRRIFPMSFVFCINIVLGNISLRYIPVSFMQTIKSLTPATTV 122

Query:   121 VLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAES 180
             VLQWLVWRKYFDWRIWASLVPIVGGILLTS+TELSFN+FGFCAALFGCLATSTKTILAES
Sbjct:   123 VLQWLVWRKYFDWRIWASLVPIVGGILLTSITELSFNVFGFCAALFGCLATSTKTILAES 182

Query:   181 LLHSYKFD 188
             LLH YKFD
Sbjct:   183 LLHGYKFD 190

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IGI

GO:0006863 "purine nucleobase transport" evidence=RCA

DICTYBASE|DDB_G0287319 DDB_G0287319 "TPT transporter family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 63/175 (36%), Positives = 104/175 (59%)

Query:    16 AILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIH-FICSSIGAYXXXXXXXXXXXXTVE 74
             A+  W++ N++ +I NK+I+  L F +P++++ IH F+C  IG+             TV+
Sbjct:    20 ALALWFILNISTLILNKYIYSSLYFYYPITLTAIHMFVCW-IGSVAVLRVYKLIPLITVQ 78

Query:    75 PEDR-WRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVW------ 127
                + +  I  +S +FC NIV GNVSLR++PVSFMQT+KS  P  TV+L  L +      
Sbjct:    79 WSGKQFINIMILSILFCSNIVFGNVSLRWVPVSFMQTVKSSVPLFTVILTTLFFSNIGGK 138

Query:   128 RKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLL 182
             +  F    + S++PIVGG+ + S++E++FN  GF AAL   + ++   I++  +L
Sbjct:   139 KTTFTRGTYLSMIPIVGGVCVASLSEVNFNQAGFIAALASSILSAVFAIVSGLIL 193

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2166384 AT5G05820 [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 56/174 (32%), Positives = 97/174 (55%)

Query:    11 FRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYXXXXXXXXXXX 70
             F ++  +  W+  N+ V++ NK++     FK+P+ ++  H    S+ +Y           
Sbjct:     9 FFTIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWLKMVPM 68

Query:    71 XTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKY 130
              T+    ++ +I  +S VFC+++V GN+SLR++PVSF Q I + TP  T V  +L+ RK 
Sbjct:    69 QTIRSRVQFFKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLMTRKK 128

Query:   131 FDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS 184
               W  + +LVP+V G+++ S  E SF++FGF   +    A + K++L   LL S
Sbjct:   129 EAWLTYFTLVPVVTGVVIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 182

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2074713 AT3G11320 [Arabidopsis thaliana (taxid:3702)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 55/174 (31%), Positives = 97/174 (55%)

Query:    11 FRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYXXXXXXXXXXX 70
             F ++  +  W+  N+ V++ NK++     FK+P+ ++  H    S+ +Y           
Sbjct:     9 FFTIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKMVPM 68

Query:    71 XTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKY 130
              T+    ++ +I  +S VFC+++V GN+SLR++PVSF Q I + TP  T V  +L+  K 
Sbjct:    69 QTIRSRVQFLKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLITFKR 128

Query:   131 FDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS 184
               W  + +LVP+V G+++ S +E SF++FGF   +    A + K++L   LL S
Sbjct:   129 EAWLTYFTLVPVVTGVVIASGSEPSFHLFGFIMCIAATAARALKSVLQGILLSS 182

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2146683 AT5G04160 "AT5G04160" [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 57/184 (30%), Positives = 99/184 (53%)

Query:     1 MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYX 60
             M +S    ++F S L I+ W+  N+ V++ NK++     FKFP+ ++  H    +I +Y 
Sbjct:     1 MSSSAKKQTLFISTL-IISWYSSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYI 59

Query:    61 XXXXXXXXXXXTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTV 120
                         ++   ++ ++  +S VFC ++V GN+SLRY+PVSF Q + + TP  T 
Sbjct:    60 SIVFLKLVPLQHLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTA 119

Query:   121 VLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAES 180
             +  +L+  K   W  + +LVP+V G+++ S  E  F+ FGF   +    A + K++L   
Sbjct:   120 LFAYLMTFKREAWVTYGALVPVVAGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGI 179

Query:   181 LLHS 184
             LL S
Sbjct:   180 LLSS 183

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2076239 AT3G10290 [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 55/176 (31%), Positives = 96/176 (54%)

Query:     9 SVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYXXXXXXXXX 68
             ++F S L IL W+  N+ V++ NK++     FKFP+ ++  H    +I +Y         
Sbjct:    55 TLFISSLIIL-WYTSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYVSIVFLKLV 113

Query:    69 XXXTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 128
                 ++   ++ ++  +S VFC ++V GN+SLRY+PVSF Q + + TP  T +  +++  
Sbjct:   114 PLQYLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYIMTF 173

Query:   129 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS 184
             K   W  + +LVP+V G+++ S  E  F+ FGF   +    A + K++L   LL S
Sbjct:   174 KREAWVTYGALVPVVTGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSS 229

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

TAIR|locus:2034730 AT1G12500 [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 52/170 (30%), Positives = 91/170 (53%)

Query:    17 ILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYXXXXXXXXXXXXT--VE 74
             I  W+  N+ V++ NK++     F++P+ ++  H +  S  AY               + 
Sbjct:    63 IAAWFGSNIGVLLLNKYLLFYYGFRYPIFLTMTHML--SCAAYSSAVINIAGIVPRQHIL 120

Query:    75 PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWR 134
                ++ +I  +S +FC+++V GN SLRYIPVSF Q I + TP  T V  +L+  K     
Sbjct:   121 SRRQFLKILSLSAIFCLSVVCGNTSLRYIPVSFNQAIGATTPFFTAVFSFLITCKTESTE 180

Query:   135 IWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS 184
             ++ +L+P+V GI+L S +E SF++FGF   +      + K+++   +L S
Sbjct:   181 VYLALLPVVSGIVLASNSEPSFHLFGFLICVASTAGRALKSVVQGIILTS 230

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

UNIPROTKB|F1PZV1 SLC35E2B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 201 (75.8 bits), Expect = 1.5e-15, P = 1.5e-15
 Identities = 54/191 (28%), Positives = 96/191 (50%)

Query:     1 MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSS-IGA- 58
             +E+ L  WS  R+LL +  W+ F+   +  NK+I   L+ + P  +  +  + ++ IG  
Sbjct:    64 IESDLGVWSS-RALLYLTLWFFFSFCTLFLNKYILSLLEGE-PSMLGAVQMLSTTFIGCI 121

Query:    59 --YXXXXXXXXXXXXTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTP 116
               +            +  P      +F     F   +VLG VSL+ + VSF +T+KS  P
Sbjct:   122 KIFVPCCLYQHKTRLSYPPNFIMIMLFVGLMRFA-TVVLGLVSLKNVAVSFAETVKSSAP 180

Query:   117 ATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTI 176
               TV++  ++  +Y    +  SL+P++GG+ L + TE+SFN+ GF AAL   +    + +
Sbjct:   181 IFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNV 240

Query:   177 LAESLLHSYKF 187
              ++ LL   K+
Sbjct:   241 FSKKLLSGDKY 251

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|P0CK96 SLC35E2B "Solute carrier family 35 member E2B" [Homo sapiens (taxid:9606)]

 Score = 201 (75.8 bits), Expect = 1.5e-15, P = 1.5e-15
 Identities = 54/191 (28%), Positives = 94/191 (49%)

Query:     1 MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSS-IGAY 59
             +E+ L  WS  R+LL +  W+ F+   +  NK+I   L  + P  +  +  + ++ IG  
Sbjct:    64 IESDLGVWSS-RALLYLTLWFFFSFCTLFLNKYILSLLGGE-PSMLGAVQMLSTTVIGCV 121

Query:    60 XXXX---XXXXXXXXTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTP 116
                            +  P      +F     F   +VLG VSL+ + VSF +T+KS  P
Sbjct:   122 KTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFA-TVVLGLVSLKNVAVSFAETVKSSAP 180

Query:   117 ATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTI 176
               TV++  ++  +Y    +  SL+P++GG+ L + TE+SFN+ GF AAL   +    + +
Sbjct:   181 IFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNV 240

Query:   177 LAESLLHSYKF 187
              ++ LL   K+
Sbjct:   241 FSKKLLSGDKY 251

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9C521	UGAL1_ARATH	No assigned EC number	0.9555	0.9523	0.5357	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00015381001 SubName- Full=Putative uncharacterized protein (Chromosome chr18 scaffold_1, whole genome shotgun sequence); (340 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	189
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	1e-16
PTZ00343	350	PTZ00343, PTZ00343, triose or hexose phosphate/pho	4e-13
pfam08449	303	pfam08449, UAA, UAA transporter family	3e-04

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score = 75.5 bits (186), Expect = 1e-16
 Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 6/170 (3%)

Query: 20  WWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLV-IKVLKLKPLITVEPEDR 78
           W+  NV   I NK +     F +P   + I     S+   L     L  +  I+      
Sbjct: 10  WYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSA---L 64

Query: 79  WRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWAS 138
            + + P++ V  I  V  NVSL  + VSF  TIK+  P  +VVL      + F   +W S
Sbjct: 65  LKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLS 124

Query: 139 LVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFD 188
           L+PIVGG+ L S TELSFN  GF +A+   +   ++ I ++  +     D
Sbjct: 125 LLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLD 174

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional

 Score = 66.3 bits (162), Expect = 4e-13
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 4/168 (2%)

Query: 12  RSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLI 71
           +  L  L W+  NV  ++ NK     L    P ++S +      + A L+      + + 
Sbjct: 49  KLALLFLTWYALNVLYVVDNKLALNML--PLPWTISSLQLFVGWLFA-LLYWATGFRKIP 105

Query: 72  TVEPEDRW-RRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKY 130
            ++    + +   P             +S+    VSF   +K+  P  T +L  L  +++
Sbjct: 106 RIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQF 165

Query: 131 FDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILA 178
            +   + SL+PIVGG+ L SV EL F    F  A+   L +S ++I A
Sbjct: 166 LNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFA 213

Length = 350

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 4/107 (3%)

Query: 42  FPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLR 101
           F   ++   F+  S+   L + + K         +   +    +   F ++ VL N +L+
Sbjct: 31  FGNLLTFAQFLFISLVGLLYLLLFKK----LKPRKIPLKTYVLIVATFFLSSVLNNEALK 86

Query: 102 YIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL 148
           YI        KS      ++L  L++ K +    + S + I  G+++
Sbjct: 87  YISYPTHVIFKSCKLIPVMILGILIYGKRYSSLQYLSALLITLGVII 133

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	189
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.96
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.95
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.89
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.85
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.83
PLN00411	358	nodulin MtN21 family protein; Provisional	99.8
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.75
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.74
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.74
PRK11272	292	putative DMT superfamily transporter inner membran	99.73
PRK11689	295	aromatic amino acid exporter; Provisional	99.72
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.72
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.72
PRK15430	296	putative chloramphenical resistance permease RarD;	99.69
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.61
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.57
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.54
KOG1582	367	consensus UDP-galactose transporter related protei	99.5
KOG1581	327	consensus UDP-galactose transporter related protei	99.47
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.45
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.45
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.41
KOG2765	416	consensus Predicted membrane protein [Function unk	99.39
KOG1580	337	consensus UDP-galactose transporter related protei	99.36
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.27
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.25
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.21
COG2510	140	Predicted membrane protein [Function unknown]	99.2
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.18
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.04
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.96
COG2962	293	RarD Predicted permeases [General function predict	98.92
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.88
PLN00411	358	nodulin MtN21 family protein; Provisional	98.84
PRK11272	292	putative DMT superfamily transporter inner membran	98.77
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.74
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.74
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.65
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.63
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.61
PRK11689	295	aromatic amino acid exporter; Provisional	98.54
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.49
KOG2766	336	consensus Predicted membrane protein [Function unk	98.47
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.47
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.4
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.38
PRK15430	296	putative chloramphenical resistance permease RarD;	98.21
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.2
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.1
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.07
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.92
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.78
COG2076	106	EmrE Membrane transporters of cations and cationic	97.76
PRK11431	105	multidrug efflux system protein; Provisional	97.75
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.75
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.7
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.68
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.66
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	97.45
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.31
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.26
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.22
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.21
COG2962	293	RarD Predicted permeases [General function predict	97.13
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.98
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.68
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.64
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.51
PRK13499	345	rhamnose-proton symporter; Provisional	96.38
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	95.29
KOG2765	416	consensus Predicted membrane protein [Function unk	95.03
KOG2922	335	consensus Uncharacterized conserved protein [Funct	94.84
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	94.62
KOG4510	346	consensus Permease of the drug/metabolite transpor	94.03
KOG1581	327	consensus UDP-galactose transporter related protei	92.97
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	92.47
PRK13499	345	rhamnose-proton symporter; Provisional	91.68
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	90.83
KOG1580	337	consensus UDP-galactose transporter related protei	90.05
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	89.17
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	85.69
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	85.26
KOG3912	372	consensus Predicted integral membrane protein [Gen	84.8

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=2.2e-27  Score=197.01  Aligned_cols=174  Identities=23%  Similarity=0.418  Sum_probs=155.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCC-hhHHHHHHHHHHH
Q 029720            9 SVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVE-PEDRWRRIFPMSF   87 (189)
Q Consensus         9 ~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~   87 (189)
                      .+++..+.|..|+.+|+..++.||+++++  +|+|++++++|++++.+.+.+.+. .+.++.++.+ ++++++.++|+|+
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~llp~gl  122 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWA-TGFRKIPRIKSLKLFLKNFLPQGL  122 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999997  889999999999999887766543 2333333343 4567889999999


Q ss_pred             HHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccccchHHHHHHHHHH
Q 029720           88 VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFG  167 (189)
Q Consensus        88 ~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~s  167 (189)
                      ++.......+.|+++++++++++++++.|+++++++++++|||++++++++++++++|+.+++.+|.++++.|++++++|
T Consensus       123 ~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s  202 (350)
T PTZ00343        123 CHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLS  202 (350)
T ss_pred             HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHH
Confidence            98777777889999999999999999999999999999999999999999999999999999888888899999999999


Q ss_pred             HHHHHHHHHHHHHhhccC
Q 029720          168 CLATSTKTILAESLLHSY  185 (189)
Q Consensus       168 ~~~~a~~~v~~~~l~~~~  185 (189)
                      ++++++|+++.|+..+++
T Consensus       203 ~~~~a~~~i~~k~~~~~~  220 (350)
T PTZ00343        203 NLGSSLRSIFAKKTMKNK  220 (350)
T ss_pred             HHHHHHHHHHHHHHhccc
Confidence            999999999999998764

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.96  E-value=6.9e-27  Score=190.33  Aligned_cols=173  Identities=31%  Similarity=0.470  Sum_probs=152.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHHHH
Q 029720           12 RSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCI   91 (189)
Q Consensus        12 ~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~   91 (189)
                      ++++.+..|+.+|++.++.||+++++  |++|..+++.|+.++.+.+.+.+. .+.+++++.+ +++++.+++.|++++.
T Consensus         2 ~~~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~g~~~~~   77 (302)
T TIGR00817         2 QTGLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKIS-SALLKLLLPVAIVHTI   77 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCC-HHHHHHHHHHHHHHHH
Confidence            57889999999999999999999996  889999999999999887766632 2223333443 5678999999999999


Q ss_pred             HHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccccchHHHHHHHHHHHHHH
Q 029720           92 NIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLAT  171 (189)
Q Consensus        92 ~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~  171 (189)
                      ++.++|.|++|+++++++++++++|+++++++++++|||++++++.+++++++|+.+...+|.+++..|+++++.++++|
T Consensus        78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~  157 (302)
T TIGR00817        78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITF  157 (302)
T ss_pred             HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999887777778888999999999999


Q ss_pred             HHHHHHHHHhhccCCCC
Q 029720          172 STKTILAESLLHSYKFD  188 (189)
Q Consensus       172 a~~~v~~~~l~~~~~~~  188 (189)
                      ++|.++.|+..++.+.|
T Consensus       158 a~~~v~~k~~~~~~~~~  174 (302)
T TIGR00817       158 VSRNIFSKKAMTIKSLD  174 (302)
T ss_pred             HHHHHHHHHhhccCCCC
Confidence            99999999998744444

specificities overlap.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.95  E-value=9.8e-28  Score=194.14  Aligned_cols=184  Identities=40%  Similarity=0.693  Sum_probs=166.9

Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHH
Q 029720            5 LCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFP   84 (189)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~   84 (189)
                      ..++...+...++..|++++++.++.||++++.++||+|++++..|++.+.+...... ..|..|..+.+++.+++.++|
T Consensus        10 ~~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~-~l~~~~~~~~~~~~~~~~llp   88 (316)
T KOG1441|consen   10 GQLKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIK-VLKLVPPSKISSKLPLRTLLP   88 (316)
T ss_pred             cccchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHH-HhcCCCCCccccccchHHHHH
Confidence            3455567788899999999999999999999988899999999999998888776664 446666655556789999999


Q ss_pred             HHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccccchHHHHHHH
Q 029720           85 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAA  164 (189)
Q Consensus        85 ~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~  164 (189)
                      +|++++++.++.|.|+++++++++|++|+++|++++++++++.+|+++++.+++++.++.||.+++.+|.++|+.|+..+
T Consensus        89 l~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a  168 (316)
T KOG1441|consen   89 LGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISA  168 (316)
T ss_pred             HHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhc--cCCCCC
Q 029720          165 LFGCLATSTKTILAESLLH--SYKFDR  189 (189)
Q Consensus       165 l~s~~~~a~~~v~~~~l~~--~~~~~~  189 (189)
                      +.+.+..++++++.|++++  ++++|+
T Consensus       169 ~~s~~~~al~~I~~~~ll~~~~~~~~~  195 (316)
T KOG1441|consen  169 MISNLAFALRNILSKKLLTSKGESLNS  195 (316)
T ss_pred             HHHHHHHHHHHHHHHHhhhccccccCc
Confidence            9999999999999999994  556653

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.89  E-value=1.1e-21  Score=156.45  Aligned_cols=174  Identities=23%  Similarity=0.393  Sum_probs=155.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHHH
Q 029720           11 FRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFC   90 (189)
Q Consensus        11 ~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~   90 (189)
                      .+..+..+.|+.+|+.+.++||+++++++||...++..+|.+.+.+.+...-+ .|..+.++++ ++..|+++|.++.+.
T Consensus        11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~-~~lv~~~~l~-~~~~kk~~P~~~lf~   88 (314)
T KOG1444|consen   11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKR-LGLVNFRPLD-LRTAKKWFPVSLLFV   88 (314)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH-hceeecCCcC-hHHHHHHccHHHHHH
Confidence            35678899999999999999999999966665556666999999988877744 4655555665 457888999999999


Q ss_pred             HHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccccchHHHHHHHHHHHHH
Q 029720           91 INIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLA  170 (189)
Q Consensus        91 ~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~  170 (189)
                      +++..+..+++|+|+|+++++|+.+|+++++.+..++|.++++..|.++....+|.......|..++..|+.|++.+.++
T Consensus        89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~  168 (314)
T KOG1444|consen   89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLT  168 (314)
T ss_pred             HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCC
Q 029720          171 TSTKTILAESLLHSYK  186 (189)
Q Consensus       171 ~a~~~v~~~~l~~~~~  186 (189)
                      .+.+.++.|+..+.-+
T Consensus       169 ~a~~~v~~kk~vd~~~  184 (314)
T KOG1444|consen  169 TAAFVVYVKKSVDSAN  184 (314)
T ss_pred             HHHHHHHHHHhhcccc
Confidence            9999999999987544

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.85  E-value=9.5e-21  Score=149.86  Aligned_cols=175  Identities=22%  Similarity=0.380  Sum_probs=156.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhc-CC--CccCChhHHHHHHHHHH
Q 029720           10 VFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKL-KP--LITVEPEDRWRRIFPMS   86 (189)
Q Consensus        10 ~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~-~~--~~~~~~~~~~~~~l~~~   86 (189)
                      .+.+...+..|+++|++..+.+|..-.+  |++|+.++.+|.++-.+......+..+. .|  +...+++++.++..|.+
T Consensus        14 rV~~L~lVl~yY~~Si~Ltf~~~~~~~~--f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPta   91 (349)
T KOG1443|consen   14 RVLTLALVLLYYFLSIGLTFYFKWLTKN--FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTA   91 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhcC--cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhh
Confidence            4556666799999999999999888876  8899999999999988887777655332 22  23457889999999999


Q ss_pred             HHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccccchHHHHHHHHH
Q 029720           87 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALF  166 (189)
Q Consensus        87 ~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~  166 (189)
                      +..++.+.++|.|++|++++.|++.|+.+++|+.+++..+.=|++++.-.+.+.++-+|+.+.++.+.+++..|+.+.+.
T Consensus        92 lata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~  171 (349)
T KOG1443|consen   92 LATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLA  171 (349)
T ss_pred             hhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhccCC
Q 029720          167 GCLATSTKTILAESLLHSYK  186 (189)
Q Consensus       167 s~~~~a~~~v~~~~l~~~~~  186 (189)
                      +.++.++...+.+.++++++
T Consensus       172 aS~~sGlRW~~tQ~ll~~~~  191 (349)
T KOG1443|consen  172 ASLLSGLRWAFTQMLLRNQP  191 (349)
T ss_pred             HHHhhhhhHHHHHHHHhcCc
Confidence            99999999999999998765

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.83  E-value=4e-19  Score=144.95  Aligned_cols=169  Identities=20%  Similarity=0.312  Sum_probs=135.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHHHHHHHHh
Q 029720           17 ILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLG   96 (189)
Q Consensus        17 ~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~   96 (189)
                      ..+|..|..-....+|..-+.++.++|..+++.|++++.+...+.....+ .+  + +++.++++.++.++++.++..++
T Consensus         6 ~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-~~--~-~~~~~~~~~~~~~~~~~~~~~~~   81 (303)
T PF08449_consen    6 AGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-FP--K-SRKIPLKKYAILSFLFFLASVLS   81 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-cc--C-CCcChHHHHHHHHHHHHHHHHHH
Confidence            34455544433444454444444447999999999999988777654433 11  1 24557888999999999999999


Q ss_pred             hhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccc----cc------hHHHHHHHHH
Q 029720           97 NVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL----SF------NMFGFCAALF  166 (189)
Q Consensus        97 ~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~----~~------~~~G~~~~l~  166 (189)
                      |.|++|+|+|+++++|++.|+++++++++++|||++++++++++++++|+.+...+|.    +.      +..|+++.++
T Consensus        82 ~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~  161 (303)
T PF08449_consen   82 NAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLL  161 (303)
T ss_pred             HHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999875442    11      1239999999


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCC
Q 029720          167 GCLATSTKTILAESLLHSYKFDR  189 (189)
Q Consensus       167 s~~~~a~~~v~~~~l~~~~~~~~  189 (189)
                      +.+++|++.+++|+..++|+.++
T Consensus       162 sl~~~a~~~~~qe~~~~~~~~~~  184 (303)
T PF08449_consen  162 SLLLDAFTGVYQEKLFKKYGKSP  184 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcH
Confidence            99999999999999999988764

; GO: 0055085 transmembrane transport

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.80  E-value=1.2e-17  Score=138.82  Aligned_cols=176  Identities=14%  Similarity=0.115  Sum_probs=139.6

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhc-CCCccCChhHHHHHHHHH
Q 029720            7 TWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKL-KPLITVEPEDRWRRIFPM   85 (189)
Q Consensus         7 ~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~   85 (189)
                      ||+..+...+.+.-=.++.++..+.|..++. |.+ |..+.++|+.++.+++.++.+..++ ++.++. .++++..+...
T Consensus         8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~-~~~~~~~l~l~   84 (358)
T PLN00411          8 WRREAVFLTAMLATETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPL-SVSILSKIGLL   84 (358)
T ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcc-hHHHHHHHHHH
Confidence            5666666666666667788999999999986 788 9999999999999988877654332 111111 23345556666


Q ss_pred             HHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHH------hhcccChhHHHHHHHHHHhhhhhcc-ccc----
Q 029720           86 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLV------WRKYFDWRIWASLVPIVGGILLTSV-TEL----  154 (189)
Q Consensus        86 ~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~------~~e~~s~~~~~~~~l~~~Gv~l~~~-~~~----  154 (189)
                      +++......+.+.+++|++++.++++.++.|++++++++++      +|||++++++.++++.++|+.+... ++.    
T Consensus        85 g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~  164 (358)
T PLN00411         85 GFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFV  164 (358)
T ss_pred             HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccc
Confidence            66655566689999999999999999999999999999999      6999999999999999999987543 110    


Q ss_pred             -------------------cch-HHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 029720          155 -------------------SFN-MFGFCAALFGCLATSTKTILAESLLHSY  185 (189)
Q Consensus       155 -------------------~~~-~~G~~~~l~s~~~~a~~~v~~~~l~~~~  185 (189)
                                         +.+ ..|+.+++.++++||+|.+.+|+..+++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~  215 (358)
T PLN00411        165 ASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY  215 (358)
T ss_pred             ccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence                               112 4599999999999999999999998876

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.75  E-value=2.4e-16  Score=129.24  Aligned_cols=179  Identities=15%  Similarity=0.216  Sum_probs=134.5

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcC-CCccCChhHHHHHHHH
Q 029720            6 CTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLK-PLITVEPEDRWRRIFP   84 (189)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~l~   84 (189)
                      .+|+.++..+..=.=..|..+....+..+-++ |++.|...++.-++.-.++.......++.. +..+. .+.++++.+.
T Consensus         7 ~~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~-~~~~~w~y~l   84 (334)
T PF06027_consen    7 FTRRFWIVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKV-LKRPWWKYFL   84 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhh-cchhHHHHHH
Confidence            44444444433333334445666777777776 788898888777766555444333222111 11111 1345666777


Q ss_pred             HHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccc---------c
Q 029720           85 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL---------S  155 (189)
Q Consensus        85 ~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~---------~  155 (189)
                      ++++...++.+.+.|++|++++..|++.++..+++++++++++|+|+++.+++|++++++|+.+....|.         +
T Consensus        85 la~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~  164 (334)
T PF06027_consen   85 LALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGS  164 (334)
T ss_pred             HHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCC
Confidence            8999999999999999999999999999999999999999999999999999999999999998765541         2


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 029720          156 FNMFGFCAALFGCLATSTKTILAESLLHSYK  186 (189)
Q Consensus       156 ~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~  186 (189)
                      ....|+++++.++++||+++++.|+..++++
T Consensus       165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~~~  195 (334)
T PF06027_consen  165 NPILGDLLALLGAILYAVSNVLEEKLVKKAP  195 (334)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence            3478999999999999999999999998764

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00688 rarD rarD protein

Probab=99.74  E-value=3.7e-16  Score=124.43  Aligned_cols=161  Identities=12%  Similarity=0.045  Sum_probs=120.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC----C-ccCChhHHHHHHHHH
Q 029720           11 FRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKP----L-ITVEPEDRWRRIFPM   85 (189)
Q Consensus        11 ~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~----~-~~~~~~~~~~~~l~~   85 (189)
                      ........+|+......    |. .++  .+ |.++.++|++++.+.+.+.....+.+.    + +..++++.+......
T Consensus         5 ~~~i~a~~~wg~~~~~~----k~-~~~--~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (256)
T TIGR00688         5 IVSLLASFLFGYMYYYS----KL-LKP--LP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLC   76 (256)
T ss_pred             HHHHHHHHHHHHHHHHH----HH-hcc--CC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHH
Confidence            34555666777666544    87 443  67 999999999999887665543322110    0 011112223334556


Q ss_pred             HHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccccchHHHHHHHH
Q 029720           86 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAAL  165 (189)
Q Consensus        86 ~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l  165 (189)
                      +++...+..+++.|+++++++.++++.++.|+++++++++++|||++++++.++++.++|+.+....+.+.+    .+++
T Consensus        77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l  152 (256)
T TIGR00688        77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEAL  152 (256)
T ss_pred             HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHH
Confidence            667788999999999999999999999999999999999999999999999999999999987654322222    3578


Q ss_pred             HHHHHHHHHHHHHHHhhc
Q 029720          166 FGCLATSTKTILAESLLH  183 (189)
Q Consensus       166 ~s~~~~a~~~v~~~~l~~  183 (189)
                      .++++|+.|.+..|+..+
T Consensus       153 ~aa~~~a~~~i~~~~~~~  170 (256)
T TIGR00688       153 VLAFSFTAYGLIRKALKN  170 (256)
T ss_pred             HHHHHHHHHHHHHhhcCC
Confidence            899999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.74  E-value=8.6e-19  Score=137.00  Aligned_cols=172  Identities=19%  Similarity=0.334  Sum_probs=149.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHHHHHHhcC------CCccCChhHHHHHHH
Q 029720           12 RSLLAILQWWVFNVTVIITNKWIFQK--LDFKFPLSVSCIHFICSSIGAYLVIKVLKLK------PLITVEPEDRWRRIF   83 (189)
Q Consensus        12 ~~~~~~~~~~~~s~~~~~~nK~~~~~--~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~l   83 (189)
                      +...+...+..+|+++.+.||++++.  .+.+-|..++++|++++..++..+.+...+.      |+.+++ -+..++.+
T Consensus        28 ~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ld-l~t~r~vl  106 (347)
T KOG1442|consen   28 QVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLD-LATARQVL  106 (347)
T ss_pred             chhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCccccc-HHHHHhhc
Confidence            44556778889999999999999996  3467899999999999999998876553322      233332 35688899


Q ss_pred             HHHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcccc---ccchHHH
Q 029720           84 PMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE---LSFNMFG  160 (189)
Q Consensus        84 ~~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G  160 (189)
                      |+++.+.+.+.++|.+++|+++++|++-|+.+.+|+++++++++|++-+.....++.+++.|-.+.+.+|   ...++.|
T Consensus       107 plsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~G  186 (347)
T KOG1442|consen  107 PLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIG  186 (347)
T ss_pred             chhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhh
Confidence            9999999999999999999999999999999999999999999999999999999999999999988776   5678999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcc
Q 029720          161 FCAALFGCLATSTKTILAESLLHS  184 (189)
Q Consensus       161 ~~~~l~s~~~~a~~~v~~~~l~~~  184 (189)
                      .++++.+.++.|+..+++|+.+.+
T Consensus       187 vifGVlaSl~vAlnaiytkk~l~~  210 (347)
T KOG1442|consen  187 VIFGVLASLAVALNAIYTKKVLPP  210 (347)
T ss_pred             hHHHHHHHHHHHHHHHhhheeccc
Confidence            999999999999999999987754

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.73  E-value=1.4e-15  Score=123.48  Aligned_cols=161  Identities=14%  Similarity=0.204  Sum_probs=126.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHH-H
Q 029720           12 RSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVF-C   90 (189)
Q Consensus        12 ~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~   90 (189)
                      ..+....+|+....    ..|...++  .+ |..++++|+.++.+.+.+.....+ ++   .+++++++.....+.+. .
T Consensus        12 ~~~~~~~iWg~~~~----~~K~~~~~--~~-p~~~~~~R~~~a~l~ll~~~~~~~-~~---~~~~~~~~~~~~~g~~~~~   80 (292)
T PRK11272         12 ALFALYIIWGSTYL----VIRIGVES--WP-PLMMAGVRFLIAGILLLAFLLLRG-HP---LPTLRQWLNAALIGLLLLA   80 (292)
T ss_pred             HHHHHHHHHhhHHH----HHHHHhcc--CC-HHHHHHHHHHHHHHHHHHHHHHhC-CC---CCcHHHHHHHHHHHHHHHH
Confidence            34445556666555    44988885  77 999999999999988877654422 11   12344566666677654 4


Q ss_pred             HHHHHhhhhh-ccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccc-cccchHHHHHHHHHHH
Q 029720           91 INIVLGNVSL-RYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT-ELSFNMFGFCAALFGC  168 (189)
Q Consensus        91 ~~~~~~~~sl-~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G~~~~l~s~  168 (189)
                      ....+.+.+. ++++++..+++.++.|+++++++.+ +|||++++++.++++.++|+.+...+ +.+.+..|+.+++.++
T Consensus        81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~  159 (292)
T PRK11272         81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIAS  159 (292)
T ss_pred             HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHH
Confidence            5667777888 9999999999999999999999986 69999999999999999999887543 3455678999999999


Q ss_pred             HHHHHHHHHHHHhhcc
Q 029720          169 LATSTKTILAESLLHS  184 (189)
Q Consensus       169 ~~~a~~~v~~~~l~~~  184 (189)
                      ++||.|.+..|+..++
T Consensus       160 ~~~a~~~~~~~~~~~~  175 (292)
T PRK11272        160 ASWAFGSVWSSRLPLP  175 (292)
T ss_pred             HHHHHHHHHHHhcCCC
Confidence            9999999999997654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.72  E-value=5.3e-16  Score=126.10  Aligned_cols=164  Identities=13%  Similarity=0.174  Sum_probs=123.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHH
Q 029720            8 WSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSF   87 (189)
Q Consensus         8 ~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   87 (189)
                      ++......++.+|+......    |..+++  +| |..+.++|+.++.+++.++.   + +|+  . ++++++..+..++
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~----k~~~~~--~~-P~~~~~~R~~~a~l~l~~~~---~-~~~--~-~~~~~~~~~~~~l   69 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLI----RGVSES--LG-PVGGAAMIYSVSGLLLLLTV---G-FPR--L-RQFPKRYLLAGGL   69 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHH----HHHHcc--CC-hHHHHHHHHHHHHHHHHHHc---c-ccc--c-ccccHHHHHHHhH
Confidence            34456667788888766544    998886  88 99999999999988876542   1 122  1 1222333333344


Q ss_pred             HHHHHHHHhhhhhc----cccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccc---------
Q 029720           88 VFCINIVLGNVSLR----YIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL---------  154 (189)
Q Consensus        88 ~~~~~~~~~~~sl~----~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~---------  154 (189)
                      .+.....+.+.+++    +.+.....++.++.|+++++++++++|||++++++.++++.++|+.+...++.         
T Consensus        70 ~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~  149 (295)
T PRK11689         70 LFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELIN  149 (295)
T ss_pred             HHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhh
Confidence            45566666666664    46777788999999999999999999999999999999999999988754332         


Q ss_pred             --cchHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 029720          155 --SFNMFGFCAALFGCLATSTKTILAESLLHSY  185 (189)
Q Consensus       155 --~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~  185 (189)
                        +.+..|+.+++.++++||.|.++.||..+++
T Consensus       150 ~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~  182 (295)
T PRK11689        150 NIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK  182 (295)
T ss_pred             ccccChHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence              1235699999999999999999999987654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.72  E-value=5.2e-16  Score=123.40  Aligned_cols=148  Identities=15%  Similarity=0.106  Sum_probs=121.3

Q ss_pred             HHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHH-HHHHHHHHhhhhhccccHhH
Q 029720           29 ITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSF-VFCINIVLGNVSLRYIPVSF  107 (189)
Q Consensus        29 ~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~sl~~~~v~~  107 (189)
                      ...|+.+++ ..| |..+.+.|+..+.+.+.+..+. +      .+++ +++..+..+. ...++..+.+.|++|++++.
T Consensus         6 ~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~-~------~~~~-~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~   75 (260)
T TIGR00950         6 VVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLRR-R------PPLK-RLLRLLLLGALQIGVFYVLYFVAVKRLPVGE   75 (260)
T ss_pred             HHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHh-c------cCHh-HHHHHHHHHHHHHHHHHHHHHHHHHhcChhh
Confidence            456998886 345 9999999999888877665432 2      1223 4444555554 56788899999999999999


Q ss_pred             HHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccc-cccchHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 029720          108 MQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT-ELSFNMFGFCAALFGCLATSTKTILAESLLHSYK  186 (189)
Q Consensus       108 ~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~  186 (189)
                      .+++.++.|+++++++.+++|||++++++.++.+.++|+.+...+ +.+.+..|+.+++.++++|+.+.++.|+..++++
T Consensus        76 ~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~  155 (260)
T TIGR00950        76 AALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEG  155 (260)
T ss_pred             hHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCC
Confidence            999999999999999999999999999999999999998887543 3455678999999999999999999999987654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.72  E-value=1.3e-15  Score=123.94  Aligned_cols=163  Identities=14%  Similarity=0.243  Sum_probs=125.0

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHH
Q 029720            6 CTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPM   85 (189)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~   85 (189)
                      .+++.........+|+......    |..+++  ++ |..+.++|+.++.+.+.+..   + +++  .    +++..+..
T Consensus         2 ~~~~~l~~l~~~~~Wg~~~~~~----k~~~~~--~~-p~~~~~~R~~~a~~~l~~~~---~-~~~--~----~~~~~~~~   64 (299)
T PRK11453          2 SRKDGVLALLVVVVWGLNFVVI----KVGLHN--MP-PLMLAGLRFMLVAFPAIFFV---A-RPK--V----PLNLLLGY   64 (299)
T ss_pred             CHHHHHHHHHHHHHHhhhHHHH----HHHHhc--CC-HHHHHHHHHHHHHHHHHHHh---c-CCC--C----chHHHHHH
Confidence            3455667777888888877755    988875  77 99999999998776654432   1 121  1    12233344


Q ss_pred             HHHH-HHHHHHhhhhhcc-ccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcccc---ccchHHH
Q 029720           86 SFVF-CINIVLGNVSLRY-IPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE---LSFNMFG  160 (189)
Q Consensus        86 ~~~~-~~~~~~~~~sl~~-~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G  160 (189)
                      ++.. .....+...+++| .+.+...++.++.|+++.+++++++|||++++++.++++.++|+.+...++   .+.+..|
T Consensus        65 g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G  144 (299)
T PRK11453         65 GLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLG  144 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHH
Confidence            5433 3455566778887 688999999999999999999999999999999999999999998876432   2345679


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccC
Q 029720          161 FCAALFGCLATSTKTILAESLLHSY  185 (189)
Q Consensus       161 ~~~~l~s~~~~a~~~v~~~~l~~~~  185 (189)
                      +.+++.++++|+.|.++.|+..+++
T Consensus       145 ~~l~l~aal~~a~~~v~~~~~~~~~  169 (299)
T PRK11453        145 FMLTLAAAFSWACGNIFNKKIMSHS  169 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccc
Confidence            9999999999999999999987554

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.69  E-value=4e-15  Score=120.99  Aligned_cols=161  Identities=12%  Similarity=0.055  Sum_probs=117.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCC--ccCChhHHHHHHHHHHHH
Q 029720           11 FRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPL--ITVEPEDRWRRIFPMSFV   88 (189)
Q Consensus        11 ~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~   88 (189)
                      ....+...+|+...+.    .|.. +  +.+ |..+.++|+.++.+.+.+.....+..+.  ++.++++++......+..
T Consensus        11 ~~~l~a~~~wg~~~~~----~k~~-~--~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (296)
T PRK15430         11 LLALAAYFIWGIAPAY----FKLI-Y--YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVL   82 (296)
T ss_pred             HHHHHHHHHHHHHHHH----HHHh-c--CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHH
Confidence            3444455566655443    3875 3  377 9999999999998877665443221110  001112222223333455


Q ss_pred             HHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccccchHHHHHHHHHHH
Q 029720           89 FCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGC  168 (189)
Q Consensus        89 ~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~  168 (189)
                      .+.+..+++.+++++|++..+++.++.|+++++++++++|||++++++.++++.++|+.+....+.+.+    .+++.++
T Consensus        83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa  158 (296)
T PRK15430         83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLA  158 (296)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHH
Confidence            678899999999999999999999999999999999999999999999999999999998753322221    4688899


Q ss_pred             HHHHHHHHHHHHhhc
Q 029720          169 LATSTKTILAESLLH  183 (189)
Q Consensus       169 ~~~a~~~v~~~~l~~  183 (189)
                      ++||.|.++.|+..+
T Consensus       159 ~~~a~~~i~~r~~~~  173 (296)
T PRK15430        159 FSFAFYGLVRKKIAV  173 (296)
T ss_pred             HHHHHHHHHHHhcCC
Confidence            999999999998754

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.61  E-value=1.4e-13  Score=111.83  Aligned_cols=171  Identities=11%  Similarity=0.015  Sum_probs=122.8

Q ss_pred             ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHH
Q 029720            2 EASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRR   81 (189)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   81 (189)
                      ..|+..-|..+.....+.-..+........|+.+++  ++ |..+.++|+.++.+++.+..+..+  +  ..+ +++++.
T Consensus         2 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~~K~~~~~--~~-~~~~~~~R~~~a~l~l~~~~~~~~--~--~~~-~~~~~~   73 (293)
T PRK10532          2 PGSLRKLPVWLPILLLLIAMASIQSGASLAKSLFPL--VG-APGVTALRLALGTLILIAIFKPWR--L--RFA-KEQRLP   73 (293)
T ss_pred             CCcccccccchHHHHHHHHHHHHHhhHHHHHHHHHH--cC-HHHHHHHHHHHHHHHHHHHHhHHh--c--cCC-HHHHHH
Confidence            334443344444444444333333444467999986  78 999999999999988876643211  1  222 345666


Q ss_pred             HHHHHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccc---cccchH
Q 029720           82 IFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT---ELSFNM  158 (189)
Q Consensus        82 ~l~~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~---~~~~~~  158 (189)
                      .+..++.......+.+.+++|+|++..+++..+.|+++++++.    |+++..  ..+.+.++|+.+....   ..+.+.
T Consensus        74 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~  147 (293)
T PRK10532         74 LLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDL  147 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHH--HHHHHHHHHHheeeecCCCcccCCh
Confidence            7778887777888899999999999999999999999998873    565544  4456778998876421   233467


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 029720          159 FGFCAALFGCLATSTKTILAESLLHSYK  186 (189)
Q Consensus       159 ~G~~~~l~s~~~~a~~~v~~~~l~~~~~  186 (189)
                      .|+.+++.++++|+.|.+..|+..++++
T Consensus       148 ~G~ll~l~aa~~~a~~~v~~r~~~~~~~  175 (293)
T PRK10532        148 TGAALALGAGACWAIYILSGQRAGAEHG  175 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence            8999999999999999999999977653

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.57  E-value=2.1e-14  Score=109.70  Aligned_cols=163  Identities=17%  Similarity=0.314  Sum_probs=142.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHHHHHHH
Q 029720           15 LAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIV   94 (189)
Q Consensus        15 ~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~   94 (189)
                      ...+.|.+.|+.+.+.||++++..||+-...+.+.|..++.+.+.++- ..|..+.    +..+.|++.|.+++....+.
T Consensus         9 ~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk-~l~~~~f----R~t~aK~WfpiSfLLv~MIy   83 (309)
T COG5070           9 TASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILK-FLRLVEF----RLTKAKKWFPISFLLVVMIY   83 (309)
T ss_pred             hHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHH-HHhHhhe----ehhhhhhhcCHHHHHHHHHH
Confidence            456789999999999999999999998888999999999988776663 3343222    13367788899999999999


Q ss_pred             HhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcccccc--------chHHHHHHHHH
Q 029720           95 LGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELS--------FNMFGFCAALF  166 (189)
Q Consensus        95 ~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~--------~~~~G~~~~l~  166 (189)
                      ....|++|.++|.+++++.++.+.++..+..++|.+.+--+..+-++.+.....+.++|.+        .+ .|++|+..
T Consensus        84 t~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~  162 (309)
T COG5070          84 TSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFT  162 (309)
T ss_pred             hcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEeh
Confidence            9999999999999999999999999999999999999999999999999999999888863        33 69999999


Q ss_pred             HHHHHHHHHHHHHHhhc
Q 029720          167 GCLATSTKTILAESLLH  183 (189)
Q Consensus       167 s~~~~a~~~v~~~~l~~  183 (189)
                      +.+..+.|....|+..+
T Consensus       163 NclssaafVL~mrkri~  179 (309)
T COG5070         163 NCLSSAAFVLIMRKRIK  179 (309)
T ss_pred             hhHhHHHHHHHHHHhhc
Confidence            99999999999988764

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.54  E-value=7.3e-13  Score=106.94  Aligned_cols=155  Identities=10%  Similarity=0.031  Sum_probs=112.8

Q ss_pred             HHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 029720           24 NVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYI  103 (189)
Q Consensus        24 s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~sl~~~  103 (189)
                      .......+|...++   +++.  .+++...+.+.+.+.......++..+.++++.+...+..+........+.+.++++.
T Consensus        13 ~a~~~~~~k~~~~~---~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   87 (281)
T TIGR03340        13 HAGWNLMAKSHADK---EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHA   87 (281)
T ss_pred             HHHHHHHHhhcCCc---hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            33444556866654   2243  466666666666555443211121122234344444445556678888999999999


Q ss_pred             cHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 029720          104 PVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE-LSFNMFGFCAALFGCLATSTKTILAESLL  182 (189)
Q Consensus       104 ~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~-~~~~~~G~~~~l~s~~~~a~~~v~~~~l~  182 (189)
                      +++..+.+.++.|+++++++++++||+++++++.++.++++|+.+...++ .+.+..|+.+++.++++|+.|.+..|+..
T Consensus        88 ~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~  167 (281)
T TIGR03340        88 DVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAA  167 (281)
T ss_pred             ChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccc
Confidence            99999999999999999999999999999999999999999998875433 33456799999999999999999988764


Q ss_pred             c
Q 029720          183 H  183 (189)
Q Consensus       183 ~  183 (189)
                      +
T Consensus       168 ~  168 (281)
T TIGR03340       168 L  168 (281)
T ss_pred             c
Confidence            4

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.50  E-value=2.7e-13  Score=106.37  Aligned_cols=179  Identities=15%  Similarity=0.162  Sum_probs=149.2

Q ss_pred             ccchhhhHHHHHHHHHHHHH-HHHHHHHHHHHhhcCCCC-chhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHH
Q 029720            4 SLCTWSVFRSLLAILQWWVF-NVTVIITNKWIFQKLDFK-FPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRR   81 (189)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~-s~~~~~~nK~~~~~~~f~-~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   81 (189)
                      +++|+++|..++.|..-.++ ......+..++++..||+ |.+.+|+.|+.+=..+..+-..  ..++++   +..+||.
T Consensus        34 ~ls~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~--~~~~k~---r~iP~rt  108 (367)
T KOG1582|consen   34 NLSDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQ--LIQTKR---RVIPWRT  108 (367)
T ss_pred             ccccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEE--eecccc---eecchhH
Confidence            57889999888887776654 456668889999988997 8899999999875544333221  222222   2346777


Q ss_pred             HHHHHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcccc----ccch
Q 029720           82 IFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE----LSFN  157 (189)
Q Consensus        82 ~l~~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~----~~~~  157 (189)
                      ...++.+..+...+.|.|+.|+|.|...++|++..+.+++.+.++.++|.++..+.+..+..+|.++.+..|    .++|
T Consensus       109 Y~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~  188 (367)
T KOG1582|consen  109 YVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFN  188 (367)
T ss_pred             hhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcc
Confidence            778899999999999999999999999999999999999999999999999999999999999999988766    5788


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 029720          158 MFGFCAALFGCLATSTKTILAESLLHSYKF  187 (189)
Q Consensus       158 ~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~  187 (189)
                      ..|+.+.-.+.+++|+-...+|+..++++-
T Consensus       189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~  218 (367)
T KOG1582|consen  189 LIGVMMISGALLADAVIGNVQEKAMKMNPA  218 (367)
T ss_pred             eeeHHHHHHHHHHHHHhhHHHHHHHhhCCC
Confidence            999999999999999999999999987653

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.47  E-value=4.6e-12  Score=100.83  Aligned_cols=147  Identities=16%  Similarity=0.138  Sum_probs=127.6

Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHH
Q 029720           39 DFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPAT  118 (189)
Q Consensus        39 ~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~  118 (189)
                      +|++|.++.++|-+++.++-.....+++   ++ .+.++++++.-.+++....+..++..|++|+|.|+..+.|++.-+.
T Consensus        47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k---~~-~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIP  122 (327)
T KOG1581|consen   47 RFEHSLFLVFCQRLVALLVSYAMLKWWK---KE-LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIP  122 (327)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhccc---cc-CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhH
Confidence            5888999999999999998866655432   22 2345577778889999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccChhHHHHHHHHHHhhhhhcccc---------ccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 029720          119 TVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE---------LSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDR  189 (189)
Q Consensus       119 ~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~---------~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~  189 (189)
                      +++++.+++|+|++..+++...++.+|+.+....+         .+.++.|+.++..+.+++++-+..++++.+++++++
T Consensus       123 Vmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~  202 (327)
T KOG1581|consen  123 VMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSS  202 (327)
T ss_pred             HHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccH
Confidence            99999999999999999999999999999865432         135689999999999999999999999999988764

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.45  E-value=1.1e-12  Score=92.47  Aligned_cols=119  Identities=22%  Similarity=0.480  Sum_probs=96.2

Q ss_pred             HHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHH-HHHHHHHhhhhhccccH
Q 029720           27 VIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFV-FCINIVLGNVSLRYIPV  105 (189)
Q Consensus        27 ~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~sl~~~~v  105 (189)
                      ....+|...++  ++ |...+++|+.++.+ +.+.....+..+....+ ++++...+..+.+ ...+..+.+.++++.++
T Consensus         6 ~~~~~k~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~   80 (126)
T PF00892_consen    6 YSVFSKKLLKK--IS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLS-PRQWLWLLFLGLLGTALAYLLYFYALKYISA   80 (126)
T ss_pred             HHHHHHHHhcc--CC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCC-hhhhhhhhHhhccceehHHHHHHHHHHhcch
Confidence            44567988886  77 99999999999997 54444443322222333 3455556667766 58899999999999999


Q ss_pred             hHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhc
Q 029720          106 SFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (189)
Q Consensus       106 ~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  150 (189)
                      +..+.+..+.|+++++++++++||+++++++.++++++.|+.+..
T Consensus        81 ~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   81 SIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.45  E-value=4.1e-11  Score=95.89  Aligned_cols=150  Identities=17%  Similarity=0.167  Sum_probs=110.6

Q ss_pred             HHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHHHHHHHHhhhhhccccHhHH
Q 029720           29 ITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFM  108 (189)
Q Consensus        29 ~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~sl~~~~v~~~  108 (189)
                      ...|...++  ...+....+.|.....+...+... .+...... ..++.++..+..++.......+.+.++++++++..
T Consensus        24 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (292)
T COG0697          24 IALKLAVES--LDPFLFAAALRFLIAALLLLPLLL-LEPRGLRP-ALRPWLLLLLLALLGLALPFLLLFLALKYTSASVA   99 (292)
T ss_pred             HHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHH-hhcccccc-cccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHH
Confidence            344666654  232556666699888877333322 11110111 11212233444445667888999999999999999


Q ss_pred             HHHhhhhHHHHHHHHH-HHhhcccChhHHHHHHHHHHhhhhhccccccc---hHHHHHHHHHHHHHHHHHHHHHHHhh
Q 029720          109 QTIKSFTPATTVVLQW-LVWRKYFDWRIWASLVPIVGGILLTSVTELSF---NMFGFCAALFGCLATSTKTILAESLL  182 (189)
Q Consensus       109 ~il~~~~pi~~~il~~-~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~---~~~G~~~~l~s~~~~a~~~v~~~~l~  182 (189)
                      +.+.++.|+++.+++. +++|||++++++.++.+...|+.++...+...   +..|+.+++.++++++++.+..|+..
T Consensus       100 ~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~  177 (292)
T COG0697         100 SLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS  177 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999997 67799999999999999999999987655433   36899999999999999999999887

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.41  E-value=5e-12  Score=100.10  Aligned_cols=109  Identities=20%  Similarity=0.308  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccc---
Q 029720           78 RWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL---  154 (189)
Q Consensus        78 ~~~~~l~~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~---  154 (189)
                      +..++..-+++|..+..+.+.++++.+++.+|+++++..+++++++++++|+|.+++||.++.+.+.|+.+...++.   
T Consensus        16 ~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~   95 (244)
T PF04142_consen   16 DTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSS   95 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccc
Confidence            44556667788999999999999999999999999999999999999999999999999999999999998653221   


Q ss_pred             ------c--------chHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 029720          155 ------S--------FNMFGFCAALFGCLATSTKTILAESLLHSYK  186 (189)
Q Consensus       155 ------~--------~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~  186 (189)
                            +        ....|++..+.+.++.++..++.|+++|+.+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~  141 (244)
T PF04142_consen   96 DNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN  141 (244)
T ss_pred             ccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence                  1        1257999999999999999999999999865

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.39  E-value=8.1e-12  Score=101.94  Aligned_cols=100  Identities=15%  Similarity=0.195  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccc--------cch
Q 029720           86 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL--------SFN  157 (189)
Q Consensus        86 ~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~--------~~~  157 (189)
                      ..+.......+|.|+.+++++..+++.+++-.|+..++.++..||+++.|.+++.+.++|+++++.+|.        +-+
T Consensus       166 c~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~  245 (416)
T KOG2765|consen  166 CPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRP  245 (416)
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccch
Confidence            334467888899999999999999999999999999999999999999999999999999999887642        223


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 029720          158 MFGFCAALFGCLATSTKTILAESLLHSY  185 (189)
Q Consensus       158 ~~G~~~~l~s~~~~a~~~v~~~~l~~~~  185 (189)
                      ..|.++++++++.||+|.++.||..+++
T Consensus       246 llG~llaL~sA~~YavY~vllk~~~~~e  273 (416)
T KOG2765|consen  246 LLGNLLALLSALLYAVYTVLLKRKIGDE  273 (416)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            6899999999999999999999998765

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.36  E-value=2e-12  Score=99.71  Aligned_cols=171  Identities=17%  Similarity=0.247  Sum_probs=133.2

Q ss_pred             HHHHHHHHHHHHHHHHHHH--HHHHhhc---CCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHH
Q 029720           12 RSLLAILQWWVFNVTVIIT--NKWIFQK---LDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMS   86 (189)
Q Consensus        12 ~~~~~~~~~~~~s~~~~~~--nK~~~~~---~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~   86 (189)
                      .+....++|...++..-=.  .||-.+.   ..|.+...+.+.|+..+.+..-++..+   +++.+.+ +.+-+.....+
T Consensus        17 ca~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~i---r~~~~~D-~t~~~~YaAcs   92 (337)
T KOG1580|consen   17 CAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLI---RKKTEID-NTPTKMYAACS   92 (337)
T ss_pred             EecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheee---ccccccc-CCcchHHHHHH
Confidence            4445556666656543211  1222111   248889999999999999887665433   3333343 44566677889


Q ss_pred             HHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcccc-------ccchHH
Q 029720           87 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE-------LSFNMF  159 (189)
Q Consensus        87 ~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~-------~~~~~~  159 (189)
                      +.+.+.....|.+++|+|.|+..+-+++.||.+++++.++.+++.+|+++++++++++||++.-+.+       .+..-.
T Consensus        93 ~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~  172 (337)
T KOG1580|consen   93 ASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGF  172 (337)
T ss_pred             HHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccch
Confidence            9999999999999999999999999999999999999999999999999999999999999987653       122247


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCC
Q 029720          160 GFCAALFGCLATSTKTILAESLLHSYK  186 (189)
Q Consensus       160 G~~~~l~s~~~~a~~~v~~~~l~~~~~  186 (189)
                      |-++.++|...+++....+++..+.|+
T Consensus       173 GElLL~lSL~mDGlTg~~Qdrira~yq  199 (337)
T KOG1580|consen  173 GELLLILSLAMDGLTGSIQDRIRASYQ  199 (337)
T ss_pred             HHHHHHHHHHhcccchhHHHHHHHhhc
Confidence            899999999999999999999987765

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.27  E-value=2.6e-10  Score=90.13  Aligned_cols=170  Identities=12%  Similarity=0.101  Sum_probs=129.9

Q ss_pred             HHHHHHHHHHHHHHHhhc-----CCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCcc-------CChhH----HHHHHH
Q 029720           20 WWVFNVTVIITNKWIFQK-----LDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLIT-------VEPED----RWRRIF   83 (189)
Q Consensus        20 ~~~~s~~~~~~nK~~~~~-----~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~-------~~~~~----~~~~~l   83 (189)
                      -..+++...++.||.-+.     .+|+.|+..+..-++--.++++.+...+++...+.       ..+.+    ..+..+
T Consensus        11 mvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl   90 (372)
T KOG3912|consen   11 MVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFL   90 (372)
T ss_pred             hhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceec
Confidence            344566777888987653     45888988887777655566655533322111110       01111    244466


Q ss_pred             HHHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccc---------
Q 029720           84 PMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL---------  154 (189)
Q Consensus        84 ~~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~---------  154 (189)
                      |-+++-..+..+.+.++.+++++.+|++|-...+|+.+++.-+++++++.++|+++..+..|+..+...|.         
T Consensus        91 ~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d  170 (372)
T KOG3912|consen   91 PPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTD  170 (372)
T ss_pred             ChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccc
Confidence            77788888888889999999999999999999999999999999999999999999999999998765431         


Q ss_pred             -cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 029720          155 -SFNMFGFCAALFGCLATSTKTILAESLLHSYKFDR  189 (189)
Q Consensus       155 -~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~  189 (189)
                       +.-..|+.+.+++-+.-|.+.++.+|.+++++.+|
T Consensus       171 ~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~p  206 (372)
T KOG3912|consen  171 YSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAP  206 (372)
T ss_pred             cccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCH
Confidence             22257999999999999999999999999988776

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.25  E-value=7.4e-11  Score=82.72  Aligned_cols=106  Identities=18%  Similarity=0.381  Sum_probs=81.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCC--ccCChhHHHHHHHHHHHHHH-HHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHH
Q 029720           48 CIHFICSSIGAYLVIKVLKLKPL--ITVEPEDRWRRIFPMSFVFC-INIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQW  124 (189)
Q Consensus        48 ~~r~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~-~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~  124 (189)
                      .+|..++.+.+.......+..+.  +.. +++++......+.... .+..++..|+++.+ +....+.++.|++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~   79 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRAL-RRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSW   79 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHH
Confidence            46788888877766554332111  111 1234454555566554 88999999999999 5888999999999999999


Q ss_pred             HHhhcccChhHHHHHHHHHHhhhhhcccccc
Q 029720          125 LVWRKYFDWRIWASLVPIVGGILLTSVTELS  155 (189)
Q Consensus       125 ~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~  155 (189)
                      +++|||++++++.++.++++|+.+...+|.+
T Consensus        80 ~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   80 LFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            9999999999999999999999999877654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.21  E-value=1.7e-09  Score=87.88  Aligned_cols=157  Identities=17%  Similarity=0.140  Sum_probs=115.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHHHH
Q 029720           12 RSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCI   91 (189)
Q Consensus        12 ~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~   91 (189)
                      .....+++|+...+-.    |.+.   +++ |..+.  |..++.+++.......+ .|+.  +.+..+..-+..++..+.
T Consensus         5 ~~lia~~~wGs~g~~~----k~~~---g~~-~~~~~--~~~~g~l~~~~~~~~~~-~~~~--~~~~~~~~g~l~G~~w~i   71 (290)
T TIGR00776         5 IALIPALFWGSFVLIN----VKIG---GGP-YSQTL--GTTFGALILSIAIAIFV-LPEF--WALSIFLVGLLSGAFWAL   71 (290)
T ss_pred             HHHHHHHHHhhhHHHH----hccC---CCH-HHHHH--HHHHHHHHHHHHHHHHh-CCcc--cccHHHHHHHHHHHHHHh
Confidence            4556777888777655    6554   356 33333  67777776655544333 2221  112233333344555778


Q ss_pred             HHHHhhhhhccccHhHHHHHhh-hhHHHHHHHHHHHhhcccChhH----HHHHHHHHHhhhhhcccccc-------ch-H
Q 029720           92 NIVLGNVSLRYIPVSFMQTIKS-FTPATTVVLQWLVWRKYFDWRI----WASLVPIVGGILLTSVTELS-------FN-M  158 (189)
Q Consensus        92 ~~~~~~~sl~~~~v~~~~il~~-~~pi~~~il~~~~~~e~~s~~~----~~~~~l~~~Gv~l~~~~~~~-------~~-~  158 (189)
                      .+.++..|.++++++.+..+.+ ..|++..+.+.+++||+.++++    ..+++++++|+.+....+.+       .+ .
T Consensus        72 g~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~  151 (290)
T TIGR00776        72 GQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFK  151 (290)
T ss_pred             hhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchh
Confidence            8899999999999999999988 8888999999999999999999    99999999999987543211       33 6


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Q 029720          159 FGFCAALFGCLATSTKTILAESL  181 (189)
Q Consensus       159 ~G~~~~l~s~~~~a~~~v~~~~l  181 (189)
                      .|++++++++++|+.|.+..|+.
T Consensus       152 ~Gi~~~l~sg~~y~~~~~~~~~~  174 (290)
T TIGR00776       152 KGILLLLMSTIGYLVYVVVAKAF  174 (290)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHc
Confidence            89999999999999999999976

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.20  E-value=2.8e-10  Score=79.92  Aligned_cols=131  Identities=18%  Similarity=0.112  Sum_probs=104.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCc-cCChhHHHHHHHHHHHHHHHHHH
Q 029720           16 AILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLI-TVEPEDRWRRIFPMSFVFCINIV   94 (189)
Q Consensus        16 ~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~   94 (189)
                      +.++-..+.....+..|..++.  .+ |.+-++.|..+....+..+....|..... +.+ ++.+.-+..-|+.-+.+..
T Consensus         7 ~ALLsA~fa~L~~iF~KIGl~~--vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~-~k~~lflilSGla~glswl   82 (140)
T COG2510           7 YALLSALFAGLTPIFAKIGLEG--VD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIG-PKSWLFLILSGLAGGLSWL   82 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHhccc--cC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccC-cceehhhhHHHHHHHHHHH
Confidence            3334444455566788999986  56 99999999999988888776655432221 123 3345555556677789999


Q ss_pred             HhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhc
Q 029720           95 LGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (189)
Q Consensus        95 ~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  150 (189)
                      +++.+++.-++|-..=+..++|+++++++++++|||++.++|+++.++++|+.+.+
T Consensus        83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            99999999999999999999999999999999999999999999999999998765

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.18  E-value=1e-08  Score=83.63  Aligned_cols=164  Identities=15%  Similarity=0.246  Sum_probs=124.3

Q ss_pred             HHHHHHHHHHHHHhhcC--CCCchhHHHHHHHHHHHHHHHHHHHHHh----cCCCccCC-----hhHHHHHHHHHHHHHH
Q 029720           22 VFNVTVIITNKWIFQKL--DFKFPLSVSCIHFICSSIGAYLVIKVLK----LKPLITVE-----PEDRWRRIFPMSFVFC   90 (189)
Q Consensus        22 ~~s~~~~~~nK~~~~~~--~f~~p~~l~~~r~~~~~~~l~~~~~~~~----~~~~~~~~-----~~~~~~~~l~~~~~~~   90 (189)
                      +.+.+..+..||.-...  .|. |.+..++--.+-.+++........    .++.+.++     .+.+..+...-++.|+
T Consensus        25 ~~~~~l~l~l~ys~~~~~~~f~-~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYa  103 (345)
T KOG2234|consen   25 AQNTALTLLLRYSRTREKPMFL-PTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYA  103 (345)
T ss_pred             HHHhhHHHHHHHHhcCCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHH
Confidence            34556667778777654  354 777777766666666665544431    11112221     1213444555677888


Q ss_pred             HHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcc---cc--------ccchHH
Q 029720           91 INIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV---TE--------LSFNMF  159 (189)
Q Consensus        91 ~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~---~~--------~~~~~~  159 (189)
                      .++.+...++.+.+++++++..++....|+++..++++||.+++||.++++.++|+.+...   ++        .+..+.
T Consensus       104 lqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~  183 (345)
T KOG2234|consen  104 LQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFL  183 (345)
T ss_pred             HhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhh
Confidence            8888999999999999999999999999999999999999999999999999999999762   11        123478


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCC
Q 029720          160 GFCAALFGCLATSTKTILAESLLHSYK  186 (189)
Q Consensus       160 G~~~~l~s~~~~a~~~v~~~~l~~~~~  186 (189)
                      |....+.+.++.++-.++.|+++|+-+
T Consensus       184 G~~avl~~c~~SgfAgvYfEkiLK~s~  210 (345)
T KOG2234|consen  184 GLVAVLVACFLSGFAGVYFEKILKGSN  210 (345)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999999999998754

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.04  E-value=2.2e-08  Score=79.43  Aligned_cols=131  Identities=13%  Similarity=0.085  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHH-HHH
Q 029720           13 SLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFV-FCI   91 (189)
Q Consensus        13 ~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~   91 (189)
                      .....+.-..+.....+..|...++.+-+ +.....+|+.++.+.+.+.....+ .+ ...+ ...+...+..+.+ ...
T Consensus       129 G~~~~l~a~~~~a~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~~  204 (260)
T TIGR00950       129 GLLLGLGSGISFALGTVLYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLG-PN-PQAL-SLQWGALLYLGLIGTAL  204 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcC-CC-CCcc-hHHHHHHHHHHHHHHHH
Confidence            33333333444444555678887653322 455666788888888777654322 12 1222 3344445556665 468


Q ss_pred             HHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhh
Q 029720           92 NIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGIL  147 (189)
Q Consensus        92 ~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~  147 (189)
                      +..+++.++++.+++..+++..+.|+++++++++++||+++.+++.|..+++.|+.
T Consensus       205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            89999999999999999999999999999999999999999999999999999863

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.96  E-value=8.7e-10  Score=86.95  Aligned_cols=150  Identities=19%  Similarity=0.321  Sum_probs=116.1

Q ss_pred             HHHhhcCCCC-chhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHHHHHHHHhhhhhcc-ccHhHHH
Q 029720           32 KWIFQKLDFK-FPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRY-IPVSFMQ  109 (189)
Q Consensus        32 K~~~~~~~f~-~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~sl~~-~~v~~~~  109 (189)
                      ..+.++  .| +-..+|+.|+++.+.-.++.-  .+   ....+++.+.|........+.....++|.++++ ++.|.+.
T Consensus        23 E~L~~~--~pgsgNLITFaqFlFia~eGlif~--sk---f~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHi   95 (330)
T KOG1583|consen   23 ELLVRN--EPGSGNLITFAQFLFIATEGLIFT--SK---FFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHI   95 (330)
T ss_pred             HHHHHh--CCCCeeehHHHHHHHHHHhceeee--cc---ccccCCCCchhhhheehheeeeeeeeccceeeecccceEEE
Confidence            455554  22 356899999987666544431  12   222233445666666777788888999999998 5999999


Q ss_pred             HHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcc---cccc--------------ch--HHHHHHHHHHHHH
Q 029720          110 TIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV---TELS--------------FN--MFGFCAALFGCLA  170 (189)
Q Consensus       110 il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~---~~~~--------------~~--~~G~~~~l~s~~~  170 (189)
                      ++|+.+++.++++++++.|+|++.+|+.+++++.+|+++.+.   .|.+              +.  ..|+.+..++.+.
T Consensus        96 IfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~  175 (330)
T KOG1583|consen   96 IFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLL  175 (330)
T ss_pred             EEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999998653   2211              11  3699999999999


Q ss_pred             HHHHHHHHHHhhccCCCC
Q 029720          171 TSTKTILAESLLHSYKFD  188 (189)
Q Consensus       171 ~a~~~v~~~~l~~~~~~~  188 (189)
                      .|...+++|...|||.-+
T Consensus       176 sa~mgiyqE~~Y~kyGKh  193 (330)
T KOG1583|consen  176 SAYMGIYQETTYQKYGKH  193 (330)
T ss_pred             HHHHHHHHHHHHHHhcCC
Confidence            999999999999988654

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.92  E-value=2.3e-07  Score=74.01  Aligned_cols=159  Identities=14%  Similarity=0.093  Sum_probs=117.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCC-cc-CChhHHHHHHHHHHHH
Q 029720           11 FRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPL-IT-VEPEDRWRRIFPMSFV   88 (189)
Q Consensus        11 ~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~-~~-~~~~~~~~~~l~~~~~   88 (189)
                      .-.+.+-..|+....    ..|.+-.   .| +.++...|.+.+...........|..+. .+ .++++.+......++.
T Consensus        10 l~~l~Ay~lwG~lp~----y~kll~~---~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962          10 LLALLAYLLWGLLPL----YFKLLEP---LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             HHHHHHHHHHHHHHH----HHHHHcc---CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            344445555555443    4477665   47 9999999999998888777655442211 11 1111233334445556


Q ss_pred             HHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccccchHHHHHHHHHHH
Q 029720           89 FCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGC  168 (189)
Q Consensus        89 ~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~  168 (189)
                      .+.+...+..|...-.+--.++-....|++.++++.+++|||+++-|++++.++.+||..-.....++++....+    +
T Consensus        82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a  157 (293)
T COG2962          82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----A  157 (293)
T ss_pred             HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----H
Confidence            688899999999998888888999999999999999999999999999999999999999887777788765444    5


Q ss_pred             HHHHHHHHHHHHh
Q 029720          169 LATSTKTILAESL  181 (189)
Q Consensus       169 ~~~a~~~v~~~~l  181 (189)
                      ++|++|...-|++
T Consensus       158 ~sf~~Ygl~RK~~  170 (293)
T COG2962         158 LSFGLYGLLRKKL  170 (293)
T ss_pred             HHHHHHHHHHHhc
Confidence            6889998877665

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.88  E-value=2.2e-07  Score=72.72  Aligned_cols=139  Identities=14%  Similarity=0.124  Sum_probs=111.3

Q ss_pred             HHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHHHHHHHHhhhhhccccHhHHH
Q 029720           30 TNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQ  109 (189)
Q Consensus        30 ~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~sl~~~~v~~~~  109 (189)
                      ..|.++..  +. |.-.+++|..++.+++..+.|-++.+    . .++++...+..|...+..+.+.+.|++.+|.+...
T Consensus        30 ~Ak~LFP~--vG-~~g~t~lRl~~aaLIll~l~RPwr~r----~-~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAV  101 (292)
T COG5006          30 FAKSLFPL--VG-AAGVTALRLAIAALILLALFRPWRRR----L-SKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAV  101 (292)
T ss_pred             HHHHHccc--cC-hhhHHHHHHHHHHHHHHHHhhHHHhc----c-ChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhh
Confidence            45777775  56 99999999999999998887765532    2 24467778889999999999999999999999999


Q ss_pred             HHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccc---cccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 029720          110 TIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT---ELSFNMFGFCAALFGCLATSTKTILAESLL  182 (189)
Q Consensus       110 il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~---~~~~~~~G~~~~l~s~~~~a~~~v~~~~l~  182 (189)
                      .+-.+.|+.++.++-    +|.  +..+-+.+.+.|..+....   ..+.|+.|..+++.+..||+.|.+..||.-
T Consensus       102 AiEF~GPL~vA~~~s----Rr~--~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g  171 (292)
T COG5006         102 AIEFTGPLAVALLSS----RRL--RDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAG  171 (292)
T ss_pred             hhhhccHHHHHHHhc----cch--hhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhc
Confidence            999999998877653    333  3444556677787775432   256789999999999999999999999887

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.84  E-value=3.8e-07  Score=76.22  Aligned_cols=122  Identities=14%  Similarity=0.143  Sum_probs=87.3

Q ss_pred             HHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCc--cCChhHHHHHHHHHHHHHHHHHHHhhhhhccccHh
Q 029720           29 ITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLI--TVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVS  106 (189)
Q Consensus        29 ~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~sl~~~~v~  106 (189)
                      +..|...++  +|.+...+++++.++.+.+.+........+..  ..........++..+++..+.+.+++.++++.++.
T Consensus       206 il~~~~~~~--~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t~lay~lw~~~v~~~ga~  283 (358)
T PLN00411        206 ILQAHIMSE--YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIITSVYYVIHSWTVRHKGPL  283 (358)
T ss_pred             HHHHHHHHH--cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHHHHHHHHHHHHHhccCch
Confidence            445666654  66456778888887777665544332211110  01111112224444444456788899999999999


Q ss_pred             HHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccc
Q 029720          107 FMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT  152 (189)
Q Consensus       107 ~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~  152 (189)
                      ...+...+.|++++++++++++|++++.+++|.+++++|+.++..+
T Consensus       284 ~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~  329 (358)
T PLN00411        284 YLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG  329 (358)
T ss_pred             HHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999999997643

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.77  E-value=6e-07  Score=72.87  Aligned_cols=121  Identities=11%  Similarity=0.072  Sum_probs=89.9

Q ss_pred             HHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHH-HHHHHHHhhhhhccccHh
Q 029720           28 IITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFV-FCINIVLGNVSLRYIPVS  106 (189)
Q Consensus        28 ~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~sl~~~~v~  106 (189)
                      .+.+|..-+    ++|...+.+|+.++...+.+.....+ .+....++.+.+..++..+++ ......+++.++++.+++
T Consensus       166 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~  240 (292)
T PRK11272        166 SVWSSRLPL----PVGMMAGAAEMLAAGVVLLIASLLSG-ERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPA  240 (292)
T ss_pred             HHHHHhcCC----CcchHHHHHHHHHHHHHHHHHHHHcC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHH
Confidence            344565432    23566778899888887766543322 111111223345556666665 467888999999999999


Q ss_pred             HHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcccc
Q 029720          107 FMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE  153 (189)
Q Consensus       107 ~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~  153 (189)
                      ..+++..+.|++.++++++++||+++..++.|..+++.|+.+....+
T Consensus       241 ~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        241 LATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998876543

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.74  E-value=2.2e-09  Score=84.44  Aligned_cols=169  Identities=16%  Similarity=0.270  Sum_probs=118.8

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHH
Q 029720            7 TWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMS   86 (189)
Q Consensus         7 ~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~   86 (189)
                      |+.+....+..+. ++++.++.+..|...    ++ |..+.-.|+++-.++..++... .+.+..  .++..-+.++.-+
T Consensus        34 d~p~~gl~l~~vs-~ff~~~~vv~t~~~e----~~-p~e~a~~r~l~~mlit~pcliy-~~~~v~--gp~g~R~~LiLRg  104 (346)
T KOG4510|consen   34 DKPNLGLLLLTVS-YFFNSCMVVSTKVLE----ND-PMELASFRLLVRMLITYPCLIY-YMQPVI--GPEGKRKWLILRG  104 (346)
T ss_pred             CCCccCceehhhH-HHHhhHHHhhhhhhc----cC-hhHhhhhhhhhehhhhheEEEE-Eeeeee--cCCCcEEEEEeeh
Confidence            3444455555556 555666666666544    34 9999999977777766665432 112210  1111122233345


Q ss_pred             HHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcc-----ccc-------
Q 029720           87 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV-----TEL-------  154 (189)
Q Consensus        87 ~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~-----~~~-------  154 (189)
                      .....+..+..+|++|.+.+-+.++...+|.|+.++++.++||++|....++..+.+.||++.+.     +|.       
T Consensus       105 ~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s  184 (346)
T KOG4510|consen  105 FMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSS  184 (346)
T ss_pred             hhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccc
Confidence            55566777888999999999999999999999999999999999999999999999999998653     221       


Q ss_pred             --cchHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 029720          155 --SFNMFGFCAALFGCLATSTKTILAESLLHS  184 (189)
Q Consensus       155 --~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~  184 (189)
                        +.+..|.+.++.++++-|---++.|++-|+
T Consensus       185 ~~~~~~~gt~aai~s~lf~asvyIilR~iGk~  216 (346)
T KOG4510|consen  185 QVEYDIPGTVAAISSVLFGASVYIILRYIGKN  216 (346)
T ss_pred             cccccCCchHHHHHhHhhhhhHHHHHHHhhcc
Confidence              234568888888888877777777777554

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.74  E-value=1.4e-06  Score=63.74  Aligned_cols=130  Identities=12%  Similarity=0.043  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHHHHHhhc-----CCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCC-cc---C-----C-hhHHHHHHHH
Q 029720           20 WWVFNVTVIITNKWIFQK-----LDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPL-IT---V-----E-PEDRWRRIFP   84 (189)
Q Consensus        20 ~~~~s~~~~~~nK~~~~~-----~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~-~~---~-----~-~~~~~~~~l~   84 (189)
                      -.++.....+..|..+++     .+.+ |..+..+....+.+.+.+.....+..+. +.   .     + ..+.+..++.
T Consensus         8 s~~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (153)
T PF03151_consen    8 SSLFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLIL   86 (153)
T ss_pred             HHHHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHH
Confidence            334455555666777776     4666 9999999999999988887665443211 00   0     0 1233444555


Q ss_pred             HHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhc
Q 029720           85 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (189)
Q Consensus        85 ~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  150 (189)
                      .++............++++++-.++++.....+.+.++++++++|+++..++.|+.+.++|+.+.+
T Consensus        87 ~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   87 SGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            556667888888999999999999999999999999999999999999999999999999998754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.65  E-value=3.7e-06  Score=68.35  Aligned_cols=127  Identities=13%  Similarity=0.088  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHH-HHHHHH
Q 029720           17 ILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVF-CINIVL   95 (189)
Q Consensus        17 ~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~   95 (189)
                      .+.=.++.....+..|...++  .+ |...+ ++..++.+.+.+......  +....+ ...+...+.++++. .+++.+
T Consensus       153 ~l~aa~~~a~~~v~~r~~~~~--~~-~~~~~-~~~~~~~~~l~~~~~~~~--~~~~~~-~~~~~~~l~lgv~~t~~~~~l  225 (293)
T PRK10532        153 ALGAGACWAIYILSGQRAGAE--HG-PATVA-IGSLIAALIFVPIGALQA--GEALWH-WSILPLGLAVAILSTALPYSL  225 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcc--CC-chHHH-HHHHHHHHHHHHHHHHcc--CcccCC-HHHHHHHHHHHHHHHHHHHHH
Confidence            333334444455566776654  44 66664 455556655555543321  111111 22333345566654 678889


Q ss_pred             hhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhc
Q 029720           96 GNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (189)
Q Consensus        96 ~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  150 (189)
                      ++.++++.++...+++....|++..++++++++|+++..+++|..+++.|++...
T Consensus       226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~  280 (293)
T PRK10532        226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST  280 (293)
T ss_pred             HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999998874

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.63  E-value=1.5e-06  Score=60.71  Aligned_cols=64  Identities=20%  Similarity=0.360  Sum_probs=59.7

Q ss_pred             HHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhc
Q 029720           87 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (189)
Q Consensus        87 ~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  150 (189)
                      ..+.....+...+++..|++.+..+.++.|+++++.+++++||++++++++++.++++|+.+..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3467889999999999999999999999999999999999999999999999999999998764

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.61  E-value=9.4e-07  Score=71.99  Aligned_cols=135  Identities=10%  Similarity=-0.030  Sum_probs=91.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhH--------HHHH-HHHHH
Q 029720           16 AILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPED--------RWRR-IFPMS   86 (189)
Q Consensus        16 ~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~-~l~~~   86 (189)
                      .++.-..+.....+..|...++.+.+ |..++.+++..+.+.+.+.....+..+....+..+        .... .+..+
T Consensus       149 ~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (302)
T TIGR00817       149 SAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAA  227 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHH
Confidence            34444444444556677777633466 99999999999988887775543211100000000        0010 11112


Q ss_pred             H-HHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcc
Q 029720           87 F-VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (189)
Q Consensus        87 ~-~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~  151 (189)
                      . .+...+.+++.+++++++..+++.....|++++++++++++|+++..+++|..++++|+.+...
T Consensus       228 ~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       228 MGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            1 2222234556799999999999999999999999999999999999999999999999998764

specificities overlap.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.54  E-value=6.7e-06  Score=66.89  Aligned_cols=74  Identities=16%  Similarity=0.258  Sum_probs=65.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcc
Q 029720           78 RWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (189)
Q Consensus        78 ~~~~~l~~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~  151 (189)
                      .+-.++..++.....+.+++.++++.++...+.+....|++.+++++++++|+++..++++.++++.|+.+...
T Consensus       214 ~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        214 AIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            44445555555677899999999999999999999999999999999999999999999999999999887643

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.49  E-value=2e-05  Score=64.14  Aligned_cols=130  Identities=13%  Similarity=0.088  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC-----CccCChhHHHHHHHHHHHHH-HHHHHH
Q 029720           22 VFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKP-----LITVEPEDRWRRIFPMSFVF-CINIVL   95 (189)
Q Consensus        22 ~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~-~~~~~~   95 (189)
                      .+.....+..|...++.+-+.......+++..+.+.........+..+     ....+ .+.+..++.++++- .+++.+
T Consensus       153 l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~i~~t~~~~~l  231 (299)
T PRK11453        153 FSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTID-MTTILSLMYLAFVATIVGYGI  231 (299)
T ss_pred             HHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCC-HHHHHHHHHHHHHHHHHHHHH
Confidence            333344455576554311111334555666655544433322211100     01122 23455566666544 578889


Q ss_pred             hhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccc
Q 029720           96 GNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT  152 (189)
Q Consensus        96 ~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~  152 (189)
                      ++.++++.++.....+....|++..++++++++|+++..+++|..+++.|+.+...+
T Consensus       232 ~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        232 WGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999999999999999886543

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.47  E-value=6.4e-09  Score=81.40  Aligned_cols=172  Identities=12%  Similarity=0.184  Sum_probs=125.2

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHH
Q 029720            7 TWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMS   86 (189)
Q Consensus         7 ~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~   86 (189)
                      +++.+..+...=.-..|.-+..+.+.++-+. +.+-|...++.-...=+++..+...+++  +.    -+..|+..+.++
T Consensus        13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~~----~~~~~~hYilla   85 (336)
T KOG2766|consen   13 TKKTLIGLGLGQILSLLITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR--KY----IKAKWRHYILLA   85 (336)
T ss_pred             chhhhheeeHHHHHHHHHHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh--HH----HHHHHHHhhhee
Confidence            5555444433333344566667788887775 4667887777766655554444443321  11    122455566677


Q ss_pred             HHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccc-------cch-H
Q 029720           87 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL-------SFN-M  158 (189)
Q Consensus        87 ~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~-------~~~-~  158 (189)
                      +.-.-++.+-..|.||++....+++.+-..+-+++++|+++|.|..+.++.|+.++++|+.+++..|.       ..| .
T Consensus        86 ~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~  165 (336)
T KOG2766|consen   86 FVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPV  165 (336)
T ss_pred             EEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCc
Confidence            66666666677899999999999999999999999999999999999999999999999998766542       233 5


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccC
Q 029720          159 FGFCAALFGCLATSTKTILAESLLHSY  185 (189)
Q Consensus       159 ~G~~~~l~s~~~~a~~~v~~~~l~~~~  185 (189)
                      .|+++.+.++-+||..++..+.+-|+-
T Consensus       166 ~GD~lvi~GATlYaVSNv~EEflvkn~  192 (336)
T KOG2766|consen  166 KGDFLVIAGATLYAVSNVSEEFLVKNA  192 (336)
T ss_pred             cCcEEEEecceeeeeccccHHHHHhcC
Confidence            799999999999999999888877653

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.47  E-value=1.1e-07  Score=72.10  Aligned_cols=109  Identities=17%  Similarity=0.175  Sum_probs=99.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcccc--
Q 029720           76 EDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE--  153 (189)
Q Consensus        76 ~~~~~~~l~~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~--  153 (189)
                      |..++...|.+++..+....+..+++.++++..+.+.++.--|+.+++++.+|+|+..-++++.++++.|+.+..+.|  
T Consensus        50 k~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~  129 (290)
T KOG4314|consen   50 KLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE  129 (290)
T ss_pred             eeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch
Confidence            445666788889999999999999999999999999999999999999999999999999999999999999887644  


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 029720          154 LSFNMFGFCAALFGCLATSTKTILAESLLHS  184 (189)
Q Consensus       154 ~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~  184 (189)
                      ...++.|+..++.|+...|+|-+.-|.....
T Consensus       130 ~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGn  160 (290)
T KOG4314|consen  130 HADEIIGIACAVGSAFMAALYKVLFKMFIGN  160 (290)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            5678999999999999999999999988754

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.40  E-value=3.7e-05  Score=64.17  Aligned_cols=135  Identities=10%  Similarity=0.024  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCC-----CCchhHHHHHHHHHHHHHHHHHHHHHhcCCC--------ccCChhHHHH
Q 029720           14 LLAILQWWVFNVTVIITNKWIFQKLD-----FKFPLSVSCIHFICSSIGAYLVIKVLKLKPL--------ITVEPEDRWR   80 (189)
Q Consensus        14 ~~~~~~~~~~s~~~~~~nK~~~~~~~-----f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~   80 (189)
                      .+.++.-.+++....+..|..+++.+     .+ +..+..++..++.+++.+.....+..+.        ...+ ...+.
T Consensus       196 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~-~~~~~  273 (350)
T PTZ00343        196 FWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLT-ASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMT-NYTKG  273 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhccc-ccchH
Confidence            33344444445556667788776532     34 6667777788888888776543321100        0000 00111


Q ss_pred             HHHHHHHHHHHHHHHhh----hhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhc
Q 029720           81 RIFPMSFVFCINIVLGN----VSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (189)
Q Consensus        81 ~~l~~~~~~~~~~~~~~----~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  150 (189)
                      ..+...+..+....++|    .+++++++..+++.....|+++.++++++++|+++..+++|..++++|+.+.+
T Consensus       274 ~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        274 IIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            12222223344444555    69999999999999999999999999999999999999999999999998865

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.38  E-value=5.3e-06  Score=66.96  Aligned_cols=62  Identities=15%  Similarity=0.175  Sum_probs=57.8

Q ss_pred             HHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhh
Q 029720           87 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL  148 (189)
Q Consensus        87 ~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l  148 (189)
                      ......+.+++.++++.+++........+|++..+++++++||+++..++.|..++++|+.+
T Consensus       219 ~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       219 LMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            34567888999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.21  E-value=0.00012  Score=59.57  Aligned_cols=66  Identities=8%  Similarity=0.019  Sum_probs=60.2

Q ss_pred             HHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhc
Q 029720           85 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (189)
Q Consensus        85 ~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  150 (189)
                      .++.....+.+++.++++.+++..+.+....|++..++++++++|+++..++.++.++++|+.+..
T Consensus       219 ~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        219 AGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            444556788999999999999999999999999999999999999999999999999988887754

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.20  E-value=8.9e-05  Score=60.27  Aligned_cols=127  Identities=13%  Similarity=0.021  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHH----HHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHH
Q 029720           12 RSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFI----CSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSF   87 (189)
Q Consensus        12 ~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   87 (189)
                      +...+.+.=.++.......+|..    +.+ |...++.|+.    .+.+...+.   .+.+|   .+.+ .....+..++
T Consensus       152 ~Gi~~~l~sg~~y~~~~~~~~~~----~~~-~~~~~~~~~~g~~~~~~~~~~~~---~~~~~---~~~~-~~~~~~~~Gi  219 (290)
T TIGR00776       152 KGILLLLMSTIGYLVYVVVAKAF----GVD-GLSVLLPQAIGMVIGGIIFNLGH---ILAKP---LKKY-AILLNILPGL  219 (290)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHc----CCC-cceehhHHHHHHHHHHHHHHHHH---hcccc---hHHH-HHHHHHHHHH
Confidence            44444444444445555667754    245 8888777766    333332222   11111   1222 3333444777


Q ss_pred             HHHHHHHHhhhhhc-cccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHH----HHHHHHHHhhhhhc
Q 029720           88 VFCINIVLGNVSLR-YIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIW----ASLVPIVGGILLTS  150 (189)
Q Consensus        88 ~~~~~~~~~~~sl~-~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~----~~~~l~~~Gv~l~~  150 (189)
                      +......++..+.+ +.+++.+.++.+..|+...+.+++++||+.+++++    ++.+++++|+.+..
T Consensus       220 ~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       220 MWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            78888999999999 99999999999999999999999999999999999    99999999988764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.10  E-value=2.9e-05  Score=55.66  Aligned_cols=69  Identities=17%  Similarity=0.268  Sum_probs=61.5

Q ss_pred             HHHH-HHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHH--HhhcccChhHHHHHHHHHHhhhhhccc
Q 029720           84 PMSF-VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWL--VWRKYFDWRIWASLVPIVGGILLTSVT  152 (189)
Q Consensus        84 ~~~~-~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~--~~~e~~s~~~~~~~~l~~~Gv~l~~~~  152 (189)
                      ..++ ++.++..+.+.+++..|++.+.-+.+..++.+.+.++.  ++||++++++++++.++++|+.+...+
T Consensus        52 ~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         52 LLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            4554 57889999999999999999999999999889888885  799999999999999999999998654

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.07  E-value=0.00061  Score=54.26  Aligned_cols=76  Identities=17%  Similarity=0.242  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHHHHH-HHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccc
Q 029720           77 DRWRRIFPMSFVFC-INIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT  152 (189)
Q Consensus        77 ~~~~~~l~~~~~~~-~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~  152 (189)
                      ..+......+++.. ....+.+.+++..+++..+.+....|++.+++++++++|+++.+++.+..+++.|+.+....
T Consensus       212 ~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         212 RAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            35555666666655 58899999999999999999999999999999999999999999999999999999887543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.92  E-value=8.7e-05  Score=52.42  Aligned_cols=71  Identities=13%  Similarity=0.209  Sum_probs=62.4

Q ss_pred             HHHHHHHHHHHHHHhhhhhccccHhHHHHHh-hhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccc
Q 029720           82 IFPMSFVFCINIVLGNVSLRYIPVSFMQTIK-SFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT  152 (189)
Q Consensus        82 ~l~~~~~~~~~~~~~~~sl~~~~v~~~~il~-~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~  152 (189)
                      .+...++++.+..+...++++.|++.+..+- ....+.+.+.+++++||++++.+++++.++++|+......
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            3445567788999999999999999988774 6899999999999999999999999999999999987543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.78  E-value=0.00025  Score=49.37  Aligned_cols=67  Identities=19%  Similarity=0.371  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHhhhhhccccHhHHHHHh-hhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcc
Q 029720           85 MSFVFCINIVLGNVSLRYIPVSFMQTIK-SFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (189)
Q Consensus        85 ~~~~~~~~~~~~~~sl~~~~v~~~~il~-~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~  151 (189)
                      .-+++..+..+...++++.|++.+.... ....+.+.+.+++++||++++.++.++.++++|+.....
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            4456788888889999999999988885 478899999999999999999999999999999998754

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.76  E-value=0.00025  Score=48.76  Aligned_cols=69  Identities=14%  Similarity=0.213  Sum_probs=59.9

Q ss_pred             HHHHHHHHHHHHHhhhhhccccHhHHHHH-hhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcc
Q 029720           83 FPMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (189)
Q Consensus        83 l~~~~~~~~~~~~~~~sl~~~~v~~~~il-~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~  151 (189)
                      +...+++..++.+-..++++.|++.+..+ .-...+.+++.+++++||+.+..+++++.++++|+.....
T Consensus        34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            33456678889999999999999987755 6678889999999999999999999999999999987654

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.75  E-value=0.00032  Score=48.41  Aligned_cols=68  Identities=13%  Similarity=0.111  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHhhhhhccccHhHHHHHh-hhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcc
Q 029720           84 PMSFVFCINIVLGNVSLRYIPVSFMQTIK-SFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (189)
Q Consensus        84 ~~~~~~~~~~~~~~~sl~~~~v~~~~il~-~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~  151 (189)
                      ....++..+..+-..+++..|++.+..+- -...+.+.+.+++++||++++.++.++.++++|+.....
T Consensus        34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            34556788888999999999999887664 488899999999999999999999999999999988753

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.75  E-value=0.0015  Score=53.30  Aligned_cols=138  Identities=10%  Similarity=0.142  Sum_probs=102.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHH--Hh-cCCCccC--ChhHHHHHHHHHHH
Q 029720           13 SLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKV--LK-LKPLITV--EPEDRWRRIFPMSF   87 (189)
Q Consensus        13 ~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~--~~-~~~~~~~--~~~~~~~~~l~~~~   87 (189)
                      ....+....++........|.++++++-+ |....++.-..+.+...+....  .+ ..+..+.  +.++.+..++..++
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~-~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~  233 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKS-PWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL  233 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence            45566666677777777888888877766 8888888888888877666544  22 1111111  11234555556666


Q ss_pred             HHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcc
Q 029720           88 VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (189)
Q Consensus        88 ~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~  151 (189)
                      .......+.+...+..+....+++..+--+++++++.+++++++++.+|.|+.++++|..+-..
T Consensus       234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence            6666666667778889999999999999999999999999999999999999999999988654

; GO: 0055085 transmembrane transport

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.70  E-value=0.00042  Score=48.12  Aligned_cols=67  Identities=15%  Similarity=0.301  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHhhhhhccccHhHHHHH-hhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhc
Q 029720           84 PMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (189)
Q Consensus        84 ~~~~~~~~~~~~~~~sl~~~~v~~~~il-~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  150 (189)
                      .....+..+..+-..++++.|++.+-.+ .....+.+.+.+++++||++++.++.++.++++|+....
T Consensus        40 ~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         40 LSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            3455677888889999999999988766 457789999999999999999999999999999998753

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.68  E-value=0.0012  Score=53.00  Aligned_cols=104  Identities=18%  Similarity=0.161  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhccccHhHHHHH-hhhhHHHHHHHHHHHhhcccChhHH----HHHHHHHHhhhhhcc
Q 029720           77 DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIW----ASLVPIVGGILLTSV  151 (189)
Q Consensus        77 ~~~~~~l~~~~~~~~~~~~~~~sl~~~~v~~~~il-~~~~pi~~~il~~~~~~e~~s~~~~----~~~~l~~~Gv~l~~~  151 (189)
                      +.+..-+..+++.+.+...+..|+++..++...=+ ....-+.+.+.++++++|-.+.+++    ++++++++|+.+.+.
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            35666666788899999999999999988877644 4667778999999999998877766    488999999999876


Q ss_pred             cccc--------chHHHHHHHHHHHHHHHHHHHHHHH
Q 029720          152 TELS--------FNMFGFCAALFGCLATSTKTILAES  180 (189)
Q Consensus       152 ~~~~--------~~~~G~~~~l~s~~~~a~~~v~~~~  180 (189)
                      .|.+        ....|+...+++.+.|..|.+..|-
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~  159 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA  159 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence            5522        2256999999999999999999765

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.66  E-value=0.0023  Score=50.55  Aligned_cols=128  Identities=9%  Similarity=0.053  Sum_probs=84.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHH-HHHHH
Q 029720           16 AILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVF-CINIV   94 (189)
Q Consensus        16 ~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~   94 (189)
                      +.+.-+.|+..+++..|.+=+.  -+ ...-...-+.++.++..++-....   .+.+....-.-.-+-.+++. .+.+.
T Consensus       152 ~Al~AG~~Wa~YIv~G~r~g~~--~~-g~~g~a~gm~vAaviv~Pig~~~a---g~~l~~p~ll~laLgvavlSSalPYs  225 (292)
T COG5006         152 LALGAGACWALYIVLGQRAGRA--EH-GTAGVAVGMLVAALIVLPIGAAQA---GPALFSPSLLPLALGVAVLSSALPYS  225 (292)
T ss_pred             HHHHHhHHHHHHHHHcchhccc--CC-CchHHHHHHHHHHHHHhhhhhhhc---chhhcChHHHHHHHHHHHHhcccchH
Confidence            3334445566666666655532  23 333444566667766666643211   11111111111112222332 57788


Q ss_pred             HhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhh
Q 029720           95 LGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT  149 (189)
Q Consensus        95 ~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~  149 (189)
                      ++..++.+.|...+.++.+..|.+.++.++++++|++|..||+++..+++++.-.
T Consensus       226 LEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~  280 (292)
T COG5006         226 LEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS  280 (292)
T ss_pred             HHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999999999999999999999998877643

>TIGR00803 nst UDP-galactose transporter

Probab=97.45  E-value=0.00039  Score=54.11  Aligned_cols=84  Identities=17%  Similarity=0.089  Sum_probs=69.3

Q ss_pred             ccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccccc---------------------------c
Q 029720          103 IPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL---------------------------S  155 (189)
Q Consensus       103 ~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~---------------------------~  155 (189)
                      +++|.....++..|+++++.+....+|+++..++++..+...|+.....+|.                           +
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            5789999999999999999999999999999999999999999875322110                           2


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 029720          156 FNMFGFCAALFGCLATSTKTILAESLLHSYK  186 (189)
Q Consensus       156 ~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~  186 (189)
                      ..+.|....+.+..+.++-.+++|+..|+++
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~  112 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGD  112 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCC
Confidence            3466777788888899999999999887654

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.31  E-value=0.01  Score=49.25  Aligned_cols=134  Identities=12%  Similarity=0.148  Sum_probs=83.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhH-HHHHHHHHHHHHH
Q 029720           12 RSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPED-RWRRIFPMSFVFC   90 (189)
Q Consensus        12 ~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~   90 (189)
                      ..+..+.+|++.++    ..|+..++  .+ +......-.+++.++..+.....++.+.++.++.. .....+-.++...
T Consensus       172 l~l~~a~lya~~nV----~~E~~v~~--~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf  244 (334)
T PF06027_consen  172 LALLGAILYAVSNV----LEEKLVKK--AP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLF  244 (334)
T ss_pred             HHHHHHHHHHHHHH----HHHHhccc--CC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHH
Confidence            34445555555444    45777775  44 44444444444555444433322322222333221 1222222223334


Q ss_pred             HHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhccc
Q 029720           91 INIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT  152 (189)
Q Consensus        91 ~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~  152 (189)
                      ....+....++..++.+..+--.++.++.++.+.+++|+++++..++|.+++++|..+....
T Consensus       245 ~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~  306 (334)
T PF06027_consen  245 LFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA  306 (334)
T ss_pred             HHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence            44445577788888888888889999999999999999999999999999999999997653

Some of the sequences in this family are annotated as putative membrane proteins.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.26  E-value=0.012  Score=47.35  Aligned_cols=125  Identities=12%  Similarity=0.071  Sum_probs=81.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHHHHH
Q 029720           13 SLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCIN   92 (189)
Q Consensus        13 ~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~   92 (189)
                      .....++=......+....|+.    +.+ |....+-|..- .++..+......  ++ ...+++.++ -+..++.++.+
T Consensus       139 gi~~Ll~stigy~~Y~~~~~~~----~~~-~~~~~lPqaiG-m~i~a~i~~~~~--~~-~~~~k~~~~-nil~G~~w~ig  208 (269)
T PF06800_consen  139 GILALLISTIGYWIYSVIPKAF----HVS-GWSAFLPQAIG-MLIGAFIFNLFS--KK-PFFEKKSWK-NILTGLIWGIG  208 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc----CCC-hhHhHHHHHHH-HHHHHHHHhhcc--cc-cccccchHH-hhHHHHHHHHH
Confidence            3333333333344555556652    244 77777777553 333333322212  11 222233344 44588999999


Q ss_pred             HHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHH----HHHHHHHHhhh
Q 029720           93 IVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIW----ASLVPIVGGIL  147 (189)
Q Consensus        93 ~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~----~~~~l~~~Gv~  147 (189)
                      ..++..|.+.+.++..-.+.++.++...+.+.+++||+=++|++    .+++++++|.+
T Consensus       209 nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  209 NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999888765    45555555544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.22  E-value=0.035  Score=40.16  Aligned_cols=121  Identities=12%  Similarity=0.143  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 029720           24 NVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYI  103 (189)
Q Consensus        24 s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~sl~~~  103 (189)
                      ......+|-.+-++.  .+|..-++.-+.++.+.+.+.....+..+.... ++.+++.+ .-+++-.....+...+....
T Consensus        13 i~~q~~~N~~L~~~~--gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~-~~~p~w~~-lGG~lG~~~V~~~~~~vp~l   88 (138)
T PF04657_consen   13 IALQAAFNGQLGKAL--GSPLVASFISFGVGFILLLIILLITGRPSLASL-SSVPWWAY-LGGLLGVFFVLSNIILVPRL   88 (138)
T ss_pred             HHHHHHHHHHHHHHh--CccHHHHHHHHHHHHHHHHHHHHHhcccccchh-ccCChHHh-ccHHHHHHHHHHHHHHhhhh
Confidence            334445666666653  359999999999898888777666443222222 12234433 36677788888899999999


Q ss_pred             cHhHHHHH-hhhhHHHHHHHHHH----HhhcccChhHHHHHHHHHHhhhh
Q 029720          104 PVSFMQTI-KSFTPATTVVLQWL----VWRKYFDWRIWASLVPIVGGILL  148 (189)
Q Consensus       104 ~v~~~~il-~~~~pi~~~il~~~----~~~e~~s~~~~~~~~l~~~Gv~l  148 (189)
                      +++..+.+ -..+-+..++.+.+    .-|+++++++.+++.++++|+.+
T Consensus        89 G~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   89 GAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            98888866 56677788888887    35788999999999999999864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.21  E-value=0.0019  Score=43.56  Aligned_cols=57  Identities=9%  Similarity=0.237  Sum_probs=35.5

Q ss_pred             HHHHHHHHHHhhhhhccccHhHHHHH-hhhhHHHHHHHHHHHhhcccChhHHHHHHHH
Q 029720           86 SFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPI  142 (189)
Q Consensus        86 ~~~~~~~~~~~~~sl~~~~v~~~~il-~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~  142 (189)
                      ...+..+..+...++++.|++...-+ .....+.+.+.+.+++||+++..++.++.++
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            34678899999999999999998655 5689999999999999999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.13  E-value=0.057  Score=43.61  Aligned_cols=128  Identities=13%  Similarity=0.133  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCC-ccCChhHHHHHHHHHHHHHHHHHHHhhh
Q 029720           20 WWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPL-ITVEPEDRWRRIFPMSFVFCINIVLGNV   98 (189)
Q Consensus        20 ~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~   98 (189)
                      +...|.+.....|...+   .+ +.+=-+..+..-..............+. ...+....+..+...|...+....++..
T Consensus       155 ~la~sf~~Ygl~RK~~~---v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~  230 (293)
T COG2962         155 ALALSFGLYGLLRKKLK---VD-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAA  230 (293)
T ss_pred             HHHHHHHHHHHHHHhcC---Cc-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHH
Confidence            34444455444454444   34 5555556666555555444433332221 0101223455566677888999999999


Q ss_pred             hhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcc
Q 029720           99 SLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (189)
Q Consensus        99 sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~  151 (189)
                      |-+.+|.++.-.+....|....+++.++++|+++..+..+-+.+-.|+++.+.
T Consensus       231 aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~  283 (293)
T COG2962         231 AAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI  283 (293)
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998887654

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.98  E-value=0.0033  Score=51.63  Aligned_cols=140  Identities=9%  Similarity=-0.004  Sum_probs=102.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCCchhHHHHHHHHHHHHHHH-HHHHHHhcCCCc----cCChhHHHHHH
Q 029720           10 VFRSLLAILQWWVFNVTVIITNKWIFQ--KLDFKFPLSVSCIHFICSSIGAY-LVIKVLKLKPLI----TVEPEDRWRRI   82 (189)
Q Consensus        10 ~~~~~~~~~~~~~~s~~~~~~nK~~~~--~~~f~~p~~l~~~r~~~~~~~l~-~~~~~~~~~~~~----~~~~~~~~~~~   82 (189)
                      ++..+..+..+......-++..|.++.  ..+.+ ++.+..++.-++...+. ++....+. +..    ..++.-.....
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~-~~~~~~~~~~~~~~~~~~  238 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEG-NKFVGFLTAPWFVTFLIL  238 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcc-cceeeeeccccchhhHHH
Confidence            345566677777777777788888884  34677 99999999888888888 76544221 111    10121123333


Q ss_pred             HHHHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcc
Q 029720           83 FPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (189)
Q Consensus        83 l~~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~  151 (189)
                      +..+.+....+......+..+++=++++.....-+.+...++++++++.++.+..|..+++.|+.+.+.
T Consensus       239 ~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  239 LLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence            344455555566677788899999999999999999999999999999999999999999999999764

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.68  E-value=0.0047  Score=50.51  Aligned_cols=66  Identities=17%  Similarity=0.274  Sum_probs=59.5

Q ss_pred             HHH-HHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhc
Q 029720           85 MSF-VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (189)
Q Consensus        85 ~~~-~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  150 (189)
                      .|+ .+..+..++..|+.+.|.+..+=+.+...++.++++..++|||++++.+.|+.+++.|+.+..
T Consensus        55 ~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   55 IGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            443 456777899999999999999999999999999999999999999999999999999988753

>TIGR00803 nst UDP-galactose transporter

Probab=96.64  E-value=0.046  Score=42.42  Aligned_cols=64  Identities=5%  Similarity=0.014  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhh
Q 029720           85 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL  148 (189)
Q Consensus        85 ~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l  148 (189)
                      ..+..+....+-...++|.+.....+...+.++++.+++.++++|+++..++.+..+++.|+.+
T Consensus       158 ~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       158 VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            4455566777788899999999999999999999999999999999999999999999988754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.51  E-value=0.0088  Score=41.72  Aligned_cols=70  Identities=23%  Similarity=0.298  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhccccHhHHHHH-hhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhh
Q 029720           79 WRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT  149 (189)
Q Consensus        79 ~~~~l~~~~~~~~~~~~~~~sl~~~~v~~~~il-~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~  149 (189)
                      ++..+|..+ +..+...++..+...+++...-+ .+++=++|++.++++.+|..+++.++++.+++.|+.+.
T Consensus        42 ~~y~ipf~l-Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   42 PKYIIPFLL-NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            444444444 33445556668888888888866 59999999999999999999999999999999998763

Many members are annotated as potential transmembrane proteins.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.38  E-value=0.24  Score=41.34  Aligned_cols=99  Identities=12%  Similarity=0.148  Sum_probs=75.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccccHhHHHHH-hhhhHHHHHHHHHHHhhccc---C----hhHHHHHHHHHHhhhhh
Q 029720           78 RWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYF---D----WRIWASLVPIVGGILLT  149 (189)
Q Consensus        78 ~~~~~l~~~~~~~~~~~~~~~sl~~~~v~~~~il-~~~~pi~~~il~~~~~~e~~---s----~~~~~~~~l~~~Gv~l~  149 (189)
                      .+...+..+++.+.+...+..+.++..++...-+ .-+.-++..++..++++|-.   +    .--..+++++++|+.+.
T Consensus        72 ~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~  151 (345)
T PRK13499         72 TLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIV  151 (345)
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHH
Confidence            3444555677888999999999999999888755 56667788888888887643   2    23458889999999997


Q ss_pred             cc----ccc--------cc-hHHHHHHHHHHHHHHHHHHH
Q 029720          150 SV----TEL--------SF-NMFGFCAALFGCLATSTKTI  176 (189)
Q Consensus       150 ~~----~~~--------~~-~~~G~~~~l~s~~~~a~~~v  176 (189)
                      ..    .|.        +. ...|+++++++.+.++.|..
T Consensus       152 s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~  191 (345)
T PRK13499        152 GRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSF  191 (345)
T ss_pred             HHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence            66    332        12 25799999999999999993

>TIGR00688 rarD rarD protein

Probab=95.29  E-value=0.92  Score=35.79  Aligned_cols=49  Identities=6%  Similarity=0.208  Sum_probs=43.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHH
Q 029720           78 RWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLV  126 (189)
Q Consensus        78 ~~~~~l~~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~  126 (189)
                      ++...+..+++....+.+.+.++++.|++..+....+.|++.++++.++
T Consensus       207 ~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       207 IWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            5666666777767899999999999999999999999999999998764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.03  E-value=0.4  Score=40.22  Aligned_cols=125  Identities=9%  Similarity=0.042  Sum_probs=86.3

Q ss_pred             HHHHHHHhhcC--CCCchhHHHHHHHHHHHHHHHHHHHHHh--cCCCccCChhHHHHHHHHHHHH-HHHHHHHhhhhhcc
Q 029720           28 IITNKWIFQKL--DFKFPLSVSCIHFICSSIGAYLVIKVLK--LKPLITVEPEDRWRRIFPMSFV-FCINIVLGNVSLRY  102 (189)
Q Consensus        28 ~~~nK~~~~~~--~f~~p~~l~~~r~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~sl~~  102 (189)
                      .++-|.=.++.  +.+-|....+.-. ++.+.+++......  ..++..+|...++-.++..++. ...+=.++..|.-.
T Consensus       263 ~vllk~~~~~eg~rvdi~lffGfvGL-fnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~l  341 (416)
T KOG2765|consen  263 TVLLKRKIGDEGERVDIQLFFGFVGL-FNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLL  341 (416)
T ss_pred             HHHHHhhcccccccccHHHHHHHHHH-HHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHh
Confidence            33447766654  3554555554433 35555554333222  2344445444445445444533 35677788888889


Q ss_pred             ccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcccc
Q 029720          103 IPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE  153 (189)
Q Consensus       103 ~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~  153 (189)
                      ++.-..++-.+.+.+..++.+.++.++++++..++|.+.+++|-++++..+
T Consensus       342 Ts~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  342 TSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             ccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence            999999999999999999999999999999999999999999998887654

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=94.84  E-value=0.015  Score=47.56  Aligned_cols=66  Identities=9%  Similarity=0.129  Sum_probs=60.6

Q ss_pred             HHH-HHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhc
Q 029720           85 MSF-VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (189)
Q Consensus        85 ~~~-~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  150 (189)
                      .|. .+..+-..++.|+.+.|.+..+-+.+++.+..++++..++||++++.-.+|+.++++|..+.+
T Consensus        69 ~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV  135 (335)
T KOG2922|consen   69 AGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIV  135 (335)
T ss_pred             HHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEE
Confidence            454 567888999999999999999999999999999999999999999999999999999977754

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.62  E-value=1.3  Score=32.55  Aligned_cols=132  Identities=10%  Similarity=0.099  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccCChhHHHHHHHHHHHHHHHHHHH
Q 029720           16 AILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVL   95 (189)
Q Consensus        16 ~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~   95 (189)
                      ..+.-+.+.....-.|-.+-+.  -++|..=++.-+.+++..+..+.......+......+.+|+.+ .-|.+-+.....
T Consensus         9 ~~i~aG~~l~~Q~~iN~qL~~~--~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~-~GG~lGa~~vt~   85 (150)
T COG3238           9 FAILAGALLPLQAAINGRLARY--LGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAW-IGGLLGAIFVTS   85 (150)
T ss_pred             HHHHHhhhhhhHHHHHHHHHHH--cCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHH-Hccchhhhhhhh
Confidence            3334444444555567767665  3468888888888888777666555332232221122233333 344444555555


Q ss_pred             hhhhhccccHhHHHHH-hhhhHHHHHHHHHH-Hh---hcccChhHHHHHHHHHHhhhhhc
Q 029720           96 GNVSLRYIPVSFMQTI-KSFTPATTVVLQWL-VW---RKYFDWRIWASLVPIVGGILLTS  150 (189)
Q Consensus        96 ~~~sl~~~~v~~~~il-~~~~pi~~~il~~~-~~---~e~~s~~~~~~~~l~~~Gv~l~~  150 (189)
                      +........+...+.+ -+..-+..++.+.+ ++   +++++..++.+++++++|+.+..
T Consensus        86 s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          86 SILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             hHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            5556666666665544 67777888888877 33   46789999999999999966554

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=94.03  E-value=0.07  Score=42.79  Aligned_cols=72  Identities=11%  Similarity=0.085  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhh
Q 029720           78 RWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT  149 (189)
Q Consensus        78 ~~~~~l~~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~  149 (189)
                      ++....-+|++..++.++-..++|.=-++-.++.+.+..++..+.+.+++++.|++..|+|.+.++.....+
T Consensus       252 dr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~  323 (346)
T KOG4510|consen  252 DRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV  323 (346)
T ss_pred             ceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence            455566688888888888889999999999999999999999999999999999999999998877766554

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=92.97  E-value=1.4  Score=35.96  Aligned_cols=137  Identities=16%  Similarity=0.178  Sum_probs=87.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhc-CCCccC--ChhHHHHHHHHHHH
Q 029720           11 FRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKL-KPLITV--EPEDRWRRIFPMSF   87 (189)
Q Consensus        11 ~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~-~~~~~~--~~~~~~~~~l~~~~   87 (189)
                      +...+.+..+..+=..++-.-+.++++++.+ +..+.+.--++..+.........+. .+..++  ..+|.+++++..+.
T Consensus       171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~  249 (327)
T KOG1581|consen  171 PIGILLLFGYLLFDGFTNATQDSLFKKYKVS-SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST  249 (327)
T ss_pred             hHhHHHHHHHHHHHhhHHhHHHHHhccCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence            4455555555554444555556677765555 6555554444444433333222221 111000  12457888988999


Q ss_pred             HHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhh
Q 029720           88 VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL  148 (189)
Q Consensus        88 ~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l  148 (189)
                      +.+.+..+-..-++.-..-+.+++.-+-=+++++++.+.++.+.++.||.++..+..|+.+
T Consensus       250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            8877776665555555555666677777889999999999999999999999999988876

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=92.47  E-value=4.5  Score=32.08  Aligned_cols=129  Identities=13%  Similarity=0.031  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHh-cCCCccCChhHHHHHHHH-HHHH
Q 029720           11 FRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLK-LKPLITVEPEDRWRRIFP-MSFV   88 (189)
Q Consensus        11 ~~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~l~-~~~~   88 (189)
                      ....+.++.-.++|..-.+.++.++++.+  .|..+--.|+-...+.+.+.....+ ..+..+...-+.+..... ....
T Consensus       113 ~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~  190 (244)
T PF04142_consen  113 LLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIFL  190 (244)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHHH
Confidence            34455566666667666677778888644  3666666776665555544432222 111111000111211222 2234


Q ss_pred             HHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHH
Q 029720           89 FCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVP  141 (189)
Q Consensus        89 ~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l  141 (189)
                      .+.+-+.-...++|.+-=.-....+...+.++++++.+++.+++....+|..+
T Consensus       191 ~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  191 QAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             HHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            45566666778899988888888999999999999999999999988877643

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK13499 rhamnose-proton symporter; Provisional

Probab=91.68  E-value=7.1  Score=32.70  Aligned_cols=69  Identities=7%  Similarity=0.052  Sum_probs=45.3

Q ss_pred             HHHHHHHHHHHHHhhhhhccccHhHHHH---Hh-hhhHHHHHHHHHHHhhcccC------hhHHHHHHHHHHhhhhhccc
Q 029720           83 FPMSFVFCINIVLGNVSLRYIPVSFMQT---IK-SFTPATTVVLQWLVWRKYFD------WRIWASLVPIVGGILLTSVT  152 (189)
Q Consensus        83 l~~~~~~~~~~~~~~~sl~~~~v~~~~i---l~-~~~pi~~~il~~~~~~e~~s------~~~~~~~~l~~~Gv~l~~~~  152 (189)
                      ...++....+..++..+-...++....+   +. ++..++..+-+. ++||+=+      +-.+.+++++++|..+...+
T Consensus       264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            3455667778888877777775554444   66 554455555555 6888755      44467888888887776543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=90.83  E-value=3.4  Score=33.94  Aligned_cols=137  Identities=9%  Similarity=-0.087  Sum_probs=88.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCC--ccCC-h--hHHHHHHHHHHHH
Q 029720           14 LLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPL--ITVE-P--EDRWRRIFPMSFV   88 (189)
Q Consensus        14 ~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~--~~~~-~--~~~~~~~l~~~~~   88 (189)
                      ..+......+........|.-.+.-+++ -..+.++.-+.....+.....+++..+.  ...+ +  ...+..+..-+++
T Consensus       159 Y~w~~~n~~~~a~~~v~~kk~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~  237 (314)
T KOG1444|consen  159 YSWALANCLTTAAFVVYVKKSVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVM  237 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHH
Confidence            3455555555566666777777765565 5666677777777776666555442220  0000 1  1123333333344


Q ss_pred             HHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcc
Q 029720           89 FCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (189)
Q Consensus        89 ~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~  151 (189)
                      ..+-..+...+.+.+|+..+++.....-..+.+...++++++.++....|+.+.+.|..+.++
T Consensus       238 gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  238 GFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             HHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence            445666777788889998888888777777777777778888999999999999888887654

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=90.05  E-value=0.51  Score=37.33  Aligned_cols=70  Identities=9%  Similarity=0.142  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhh
Q 029720           79 WRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL  148 (189)
Q Consensus        79 ~~~~l~~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l  148 (189)
                      ++.+..+++..+++.++-..-..+-++-.-+++..+--.|+.+.+.++++..++.+||++..++..|...
T Consensus       241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA  310 (337)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence            5556666777777777666655555555555666677789999999999999999999999999988775

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=89.17  E-value=6.7  Score=32.72  Aligned_cols=162  Identities=13%  Similarity=0.077  Sum_probs=91.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHH-HHHHHHHHHHHHHHHHHhcCCC----ccCChhHHHHHHHHHH
Q 029720           12 RSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSC-IHFICSSIGAYLVIKVLKLKPL----ITVEPEDRWRRIFPMS   86 (189)
Q Consensus        12 ~~~~~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~-~r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~l~~~   86 (189)
                      ..+++..+-.+++.+..+--|.+=+   +  .++-.+ .|.+++.++.=....... .|.    ....+.+........+
T Consensus         7 ~Gii~h~iGg~~~~sfy~P~kkvk~---W--sWEs~Wlv~gi~swli~P~~~a~l~-ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    7 LGIIFHAIGGFASGSFYVPFKKVKG---W--SWESYWLVQGIFSWLIVPWLWALLA-IPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             HHHHHHHHHHHHhhhhccchhhcCC---c--cHHHHHHHHHHHHHHHHHHHHHHHh-CCcHHHHHHhCChhHHHHHHHHH
Confidence            3444555555666666555554432   2  233332 355555554422221111 121    0011234555566678


Q ss_pred             HHHHHHHHHhhhhhccccHhHHHHH-hhhhHHHHHHHHHHHh-------hcccChhHHHHHHHHHHhhhhhcc----cc-
Q 029720           87 FVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVW-------RKYFDWRIWASLVPIVGGILLTSV----TE-  153 (189)
Q Consensus        87 ~~~~~~~~~~~~sl~~~~v~~~~il-~~~~pi~~~il~~~~~-------~e~~s~~~~~~~~l~~~Gv~l~~~----~~-  153 (189)
                      ++...+...+-.+.+|+.++..+-+ --+.-.+-.++-.++.       .++-.....+++++.++|+.+...    .| 
T Consensus        81 ~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~  160 (344)
T PF06379_consen   81 VLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK  160 (344)
T ss_pred             HHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh
Confidence            8888888888889999887776633 1222222222222222       223345678999999999998642    11 


Q ss_pred             ------ccch-HHHHHHHHHHHHHHHHHHHHHH
Q 029720          154 ------LSFN-MFGFCAALFGCLATSTKTILAE  179 (189)
Q Consensus       154 ------~~~~-~~G~~~~l~s~~~~a~~~v~~~  179 (189)
                            .++| ..|.+.+++|.+..|.++.-.+
T Consensus       161 ~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~  193 (344)
T PF06379_consen  161 ELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD  193 (344)
T ss_pred             hhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence                  1334 3699999999999999887554

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=85.69  E-value=0.66  Score=36.89  Aligned_cols=71  Identities=10%  Similarity=0.039  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHH----HHHHHHHhhhh
Q 029720           78 RWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWA----SLVPIVGGILL  148 (189)
Q Consensus        78 ~~~~~l~~~~~~~~~~~~~~~sl~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~----~~~l~~~Gv~l  148 (189)
                      +...-...++..+.++.+...|-+.+.+++.-.+.++..+...+-+.+++|||=+.+++.    ++++++.|..+
T Consensus       208 ~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~  282 (288)
T COG4975         208 YTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL  282 (288)
T ss_pred             HHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence            333344578888888888888999999999999999999999999999999999988864    45555555444

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=85.26  E-value=17  Score=28.79  Aligned_cols=119  Identities=7%  Similarity=-0.036  Sum_probs=77.0

Q ss_pred             HHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhc-CCC---ccCChhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 029720           26 TVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKL-KPL---ITVEPEDRWRRIFPMSFVFCINIVLGNVSLR  101 (189)
Q Consensus        26 ~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~-~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~sl~  101 (189)
                      +..+..|...+-.+|. -..-.++.-..+..++..+..+.+. .|.   ..+ +.|....+..-|++..+...+.-..+.
T Consensus       169 afVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl-~~d~l~am~ISgl~svgiSy~saWcvr  246 (309)
T COG5070         169 AFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNL-SVDSLMAMFISGLCSVGISYCSAWCVR  246 (309)
T ss_pred             HHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCC-ChHHHHHHHHHHHHHhhhhhccceeEe
Confidence            3444444444433455 5555666666666666555544332 111   111 234455666667777777778888888


Q ss_pred             cccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhh
Q 029720          102 YIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGI  146 (189)
Q Consensus       102 ~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv  146 (189)
                      -++...+++..++.-...++-+.++++|..++..+.++++.....
T Consensus       247 VtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg  291 (309)
T COG5070         247 VTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSG  291 (309)
T ss_pred             ehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHH
Confidence            899999999999988888888888888888887777766554433

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=84.80  E-value=20  Score=29.34  Aligned_cols=133  Identities=13%  Similarity=0.143  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCcc---------C-ChhHHHHH----
Q 029720           16 AILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLIT---------V-EPEDRWRR----   81 (189)
Q Consensus        16 ~~~~~~~~s~~~~~~nK~~~~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~---------~-~~~~~~~~----   81 (189)
                      .+...++..+.+..=.|++..+ +.+ |.....++..++.+++.++.....+.|..+         . ++.+.++.    
T Consensus       181 IiiaqiivaiQ~v~Eek~l~~~-nV~-pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~  258 (372)
T KOG3912|consen  181 IIIAQIIVAIQMVCEEKQLKKS-NVA-PLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQES  258 (372)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhc-cCC-HHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCC
Confidence            4455556666665556666554 677 999999999999777766654443333221         1 11111111    


Q ss_pred             --HHHHHHHHHHHHHHhhhh----hccccHhHHHHHhhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhc
Q 029720           82 --IFPMSFVFCINIVLGNVS----LRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (189)
Q Consensus        82 --~l~~~~~~~~~~~~~~~s----l~~~~v~~~~il~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  150 (189)
                        +......+..++.+.|.+    -++.|+.+-.++-+.-..++=+++..+..|++..-|+++-++...|.++..
T Consensus       259 p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  259 PSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             chhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              111112233344444432    355677778888888888899999999999999999999999999998864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	189
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.61
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.51

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.61  E-value=2.4e-07  Score=63.59  Aligned_cols=69  Identities=19%  Similarity=0.378  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHhhhhhccccHhHHHHH-hhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcccc
Q 029720           85 MSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE  153 (189)
Q Consensus        85 ~~~~~~~~~~~~~~sl~~~~v~~~~il-~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~  153 (189)
                      ..+.+..+..+...++++.|++....+ ....|+++++.+++++||++++.+++++.++++|+.+....+
T Consensus        36 ~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            345678889999999999999999888 899999999999999999999999999999999999876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.51  E-value=1.9e-07  Score=66.63  Aligned_cols=67  Identities=19%  Similarity=0.394  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHHhhhhhccccHhHHHHH-hhhhHHHHHHHHHHHhhcccChhHHHHHHHHHHhhhhhcc
Q 029720           85 MSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (189)
Q Consensus        85 ~~~~~~~~~~~~~~sl~~~~v~~~~il-~~~~pi~~~il~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~  151 (189)
                      ..+.+.++..+.+.++++.|++....+ ....|+++++++++++||++++.+++++.++++|+.+...
T Consensus        36 ~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            345678899999999999999988887 8999999999999999999999999999999999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00