Citrus Sinensis ID: 029779

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
MASEAPAKYEDQRAVRENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRIRD
Secondary Structure (PSIPRED)
cccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccccccEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
maseapakyedqrAVRENYFGIDVGLRVLLFSATLVSVIVMATAKqtelvspagipirvsvkakftdspaFIYFVAALSVACLYSIITMLASLsvvskpasAKRLLLYFAFWDVVMLGIVASatgasggvgyiglkgnshsRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRIRD
Flexible Loop (DISEMBL)
maseapakyedqravRENYFGIDVGLRVLLFSATLVSVIVMATakqtelvspagipIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSmlssyslylrird
Low Complexity Region (SEG)
MASEAPAKYEDQRAVRENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLgivasatgasggvgYIGLKGNSHSRWTKICNVYDKYCRHIGSATGVsllaavllvllsmlssyslylRIRD
Disordered region (IsUnstruct)
**************VRENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRI**
Disordered Region (DISOPRED)
*********************IDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYL****
Disordered Region (DISEMBL)
**********DQRAVRENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRIRD
Disordered Region (DISPRO)
****************ENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRI**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASEAPAKYEDQRAVRENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRIRD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	188	2.2.26 [Sep-21-2011]
B9RT03	201	CASP-like protein RCOM_06	N/A	no	0.920	0.860	0.678	7e-57
B9HMP5	196	CASP-like protein POPTRDR	yes	no	0.962	0.923	0.605	3e-55
C6SVQ5	193	CASP-like protein 7 OS=Gl	yes	no	0.882	0.860	0.570	2e-47
A7NW79	208	CASP-like protein VIT_05s	yes	no	0.904	0.817	0.582	5e-46
C6SXZ3	193	CASP-like protein 8 OS=Gl	no	no	0.882	0.860	0.547	8e-46
D2KQI6	194	CASP-like protein Ni6 OS=	N/A	no	0.888	0.860	0.578	7e-45
D7MAF7	194	CASP-like protein ARALYDR	N/A	no	0.872	0.845	0.575	3e-42
Q9FE29	193	CASP-like protein At4g156	yes	no	0.872	0.849	0.563	4e-41
Q1EPG6	191	CASP-like protein MA4_106	N/A	no	0.755	0.743	0.510	6e-41
Q6YT98	207	CASP-like protein Os07g04	yes	no	0.888	0.806	0.494	3e-40

>sp|B9RT03|CSPL5_RICCO CASP-like protein RCOM_0679870 OS=Ricinus communis GN=RCOM_0679870 PE=2 SV=1

 Score =  219 bits (559), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 118/174 (67%), Positives = 144/174 (82%), Gaps = 1/174 (0%)

Query: 15  VRENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIP-IRVSVKAKFTDSPAFIY 73
           +R +YF +DVGLRV LF+ TL +++VM+TAKQTEL    G+P +RV V+AKF  SPAFIY
Sbjct: 25  LRRDYFAVDVGLRVFLFATTLTAIVVMSTAKQTELAPVPGVPGLRVPVEAKFNHSPAFIY 84

Query: 74  FVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYI 133
           FVAALSVACLYSIIT LASL V++KP  A + L Y+A WDV+MLGIVA+ATGA+GGV YI
Sbjct: 85  FVAALSVACLYSIITTLASLGVIAKPIYATKFLFYYALWDVLMLGIVAAATGAAGGVAYI 144

Query: 134 GLKGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRIR 187
           GLKGNSH+RWTKICNVYD +C+H+GSA  +SL A+V+LVLL MLS  SLY R+R
Sbjct: 145 GLKGNSHTRWTKICNVYDTFCKHVGSALAISLAASVVLVLLIMLSVCSLYSRVR 198

Ricinus communis (taxid: 3988)

>sp|B9HMP5|CSPLD_POPTR CASP-like protein POPTRDRAFT_820933 OS=Populus trichocarpa GN=POPTRDRAFT_820933 PE=3 SV=1

 Score =  214 bits (544), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 112/185 (60%), Positives = 146/185 (78%), Gaps = 4/185 (2%)

Query: 2   ASEAPAKYEDQRAVRENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSV 61
           + EAPA +      R NY  + V LR LLF+A++ +V+VM TAKQT++V   G PI V +
Sbjct: 14  SEEAPAAHPR----RSNYSSVHVALRFLLFAASVTAVVVMVTAKQTKIVPVPGFPISVPL 69

Query: 62  KAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVA 121
           +AKF+DSPAFIYF++ALSVA LY I+T LA++S+V KPA A R LL+FA  DV+MLGIVA
Sbjct: 70  EAKFSDSPAFIYFISALSVAGLYGILTTLAAISIVLKPAYATRFLLHFALLDVLMLGIVA 129

Query: 122 SATGASGGVGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYS 181
           SATGA+GGV Y+GLKGNSH RW K+CNVYDK+C+H+GS+  V+L A+VLLVLL+MLS +S
Sbjct: 130 SATGAAGGVAYVGLKGNSHVRWGKVCNVYDKFCQHVGSSIAVALFASVLLVLLTMLSVFS 189

Query: 182 LYLRI 186
           +Y +I
Sbjct: 190 IYRKI 194

Populus trichocarpa (taxid: 3694)

>sp|C6SVQ5|CSPL7_SOYBN CASP-like protein 7 OS=Glycine max PE=2 SV=1

 Score =  188 bits (477), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 97/170 (57%), Positives = 126/170 (74%), Gaps = 4/170 (2%)

Query: 18  NYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAA 77
           +YF  DV LR LLF+A+LV+V+V+ TA QTE++    +P  V   AKF  SPAF+YFVAA
Sbjct: 25  DYFKFDVILRFLLFAASLVAVVVIVTANQTEVIR---VPQPVPWPAKFRYSPAFVYFVAA 81

Query: 78  LSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKG 137
           LSV  LYSIIT LASL   +KPA   +LLLYF  WD ++LGI+ASATG +GGV Y+GLKG
Sbjct: 82  LSVTGLYSIITTLASLLASNKPALKTKLLLYFILWDALILGIIASATGTAGGVAYLGLKG 141

Query: 138 NSH-SRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRI 186
           N H   W KIC+VYDK+CRH+G++  V+L  +V+ VLL  LS+YS++ R+
Sbjct: 142 NRHVVGWNKICHVYDKFCRHVGASIAVALFGSVVTVLLIWLSAYSIHSRV 191

Glycine max (taxid: 3847)

>sp|A7NW79|CSPL7_VITVI CASP-like protein VIT_05s0020g01830 OS=Vitis vinifera GN=VIT_05s0020g01830 PE=2 SV=2

 Score =  183 bits (465), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 99/170 (58%), Positives = 130/170 (76%)

Query: 19  YFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAAL 78
           Y  +DV LR+LL  + + SV+VM T+ QT+L++ AG+P+ VS KAKF +SPAFIYFVAAL
Sbjct: 39  YSALDVVLRILLLGSAVASVVVMVTSVQTKLIAVAGVPVLVSNKAKFQNSPAFIYFVAAL 98

Query: 79  SVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGN 138
           SV  LYSIIT LAS   +SKP+ + + +L+ A WDV+MLG+ ASATG +GGV Y+GLKGN
Sbjct: 99  SVVGLYSIITTLASFIFISKPSCSTKTILHLAIWDVLMLGLAASATGTAGGVAYVGLKGN 158

Query: 139 SHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRIRD 188
           SH  W K+CN YDK+CRH+G +  V+L A++LLVLL  LS ++LY RIR 
Sbjct: 159 SHVGWNKVCNTYDKFCRHVGGSIAVALFASILLVLLVWLSLFTLYSRIRK 208

Vitis vinifera (taxid: 29760)

>sp|C6SXZ3|CSPL8_SOYBN CASP-like protein 8 OS=Glycine max PE=2 SV=1

 Score =  182 bits (463), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 93/170 (54%), Positives = 125/170 (73%), Gaps = 4/170 (2%)

Query: 18  NYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAA 77
           +YF  DV LR +LF+A+LV+V+V+ T  QTE++    +P  V   AKF  +PAF+YFVAA
Sbjct: 25  DYFKFDVILRFVLFAASLVAVVVIVTGNQTEVIL---VPQPVPWPAKFRYTPAFVYFVAA 81

Query: 78  LSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKG 137
           LSV  LYSIIT LASL   +KPA   +LL YF  WD ++LGI+ASATG +GGV Y+GLKG
Sbjct: 82  LSVTGLYSIITTLASLFASNKPALKTKLLPYFILWDALILGIIASATGTAGGVAYLGLKG 141

Query: 138 NSH-SRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRI 186
           NSH   W KIC+VYDK+CRH+G++  V+L  +++ VLL  LS+YS++ R+
Sbjct: 142 NSHVVGWNKICHVYDKFCRHVGASIAVALFGSIVTVLLIWLSAYSIHSRV 191

Glycine max (taxid: 3847)

>sp|D2KQI6|CSPL1_BETVM CASP-like protein Ni6 OS=Beta vulgaris subsp. maritima GN=Ni6 PE=2 SV=1

 Score =  179 bits (455), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 99/171 (57%), Positives = 123/171 (71%), Gaps = 4/171 (2%)

Query: 17  ENYFGIDVGLRVLLFSATLVSVIVMATAKQTEL-VSPAGIPIRVSVKAKFTDSPAFIYFV 75
             Y  +DV LRVLL +A++ SV++M T+KQTE+ VSP G        AKF +SPAFIY V
Sbjct: 24  NKYRVVDVILRVLLLAASIASVVLMVTSKQTEIIVSPFG---SRPNAAKFQNSPAFIYLV 80

Query: 76  AALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGL 135
           AALSVA LYSIIT L SLS + KP    +L       DV++LGIVA+ATG +GGVGYIGL
Sbjct: 81  AALSVAGLYSIITALVSLSYMRKPIVPPKLFWILLIHDVLLLGIVAAATGTAGGVGYIGL 140

Query: 136 KGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRI 186
           KGN+H RW KI NVYDK+CRH+G++  VSL AA +LVLL  +++ SLY RI
Sbjct: 141 KGNTHVRWGKIRNVYDKFCRHVGASIIVSLFAAAVLVLLVFVNANSLYRRI 191

Beta vulgaris subsp. maritima (taxid: 350892)

>sp|D7MAF7|CSPL6_ARALL CASP-like protein ARALYDRAFT_915236 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915236 PE=3 SV=1

 Score =  171 bits (433), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/165 (57%), Positives = 121/165 (73%), Gaps = 1/165 (0%)

Query: 23  DVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVAC 82
            V LR +LF+ATL S++VM T+KQT+ +   G PIR+   AKFT+SPA IYFV ALSVAC
Sbjct: 31  QVVLRFVLFAATLTSIVVMVTSKQTKNIFIPGTPIRIPA-AKFTNSPALIYFVVALSVAC 89

Query: 83  LYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNSHSR 142
            YSI++   ++S   K + +  LLL  A  D VM+GIVASATGA GGV Y+GLKGN   R
Sbjct: 90  FYSIVSTFVTVSAFKKHSCSAILLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEVR 149

Query: 143 WTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRIR 187
           W KICN+YDK+CRH+G A  VSL A+V+L+LLS++S  SLY +IR
Sbjct: 150 WGKICNIYDKFCRHVGGAIAVSLFASVILLLLSIISVLSLYKKIR 194

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

>sp|Q9FE29|CSPLM_ARATH CASP-like protein At4g15610 OS=Arabidopsis thaliana GN=At4g15610 PE=2 SV=1

 Score =  167 bits (423), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/165 (56%), Positives = 121/165 (73%), Gaps = 1/165 (0%)

Query: 23  DVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVAC 82
            V LR +LF+ATL S++VM T+KQT+ +   G PIR+   A+FT+SPA IYFV ALSVAC
Sbjct: 30  QVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIRIPA-AEFTNSPALIYFVVALSVAC 88

Query: 83  LYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNSHSR 142
            YSI++   ++S   K + +  LLL  A  D VM+GIVASATGA GGV Y+GLKGN   R
Sbjct: 89  FYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEVR 148

Query: 143 WTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRIR 187
           W KIC++YDK+CRH+G A  VSL A+V+L+LLS++S  SLY +IR
Sbjct: 149 WGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKKIR 193

Arabidopsis thaliana (taxid: 3702)

>sp|Q1EPG6|CSPL2_MUSAC CASP-like protein MA4_106O17.52 OS=Musa acuminata GN=MA4_106O17.52 PE=3 SV=2

 Score =  166 bits (421), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 74/145 (51%), Positives = 102/145 (70%), Gaps = 3/145 (2%)

Query: 17  ENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVS---PAGIPIRVSVKAKFTDSPAFIY 73
            N FG+D GLR+LL ++ + +++V+ T+KQTE +    P   P  +S  AKF  SPAFIY
Sbjct: 18  PNLFGVDFGLRLLLLASAVSALVVLVTSKQTESIPTSLPPPFPAFISRDAKFQHSPAFIY 77

Query: 74  FVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYI 133
            + ALSV C YSIITM+AS + ++ P+S+ R+L +    D VM G++ASA G +G V Y+
Sbjct: 78  LLVALSVTCFYSIITMVASFAAITSPSSSPRMLFHLVLSDAVMAGVMASAAGTAGSVAYL 137

Query: 134 GLKGNSHSRWTKICNVYDKYCRHIG 158
           GLKGNSH  W K+CNVYDK+CRH+G
Sbjct: 138 GLKGNSHVNWNKVCNVYDKFCRHVG 162

Musa acuminata (taxid: 4641)

>sp|Q6YT98|CSPL7_ORYSJ CASP-like protein Os07g0442900 OS=Oryza sativa subsp. japonica GN=Os07g0442900 PE=2 SV=1

 Score =  164 bits (416), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 84/170 (49%), Positives = 119/170 (70%), Gaps = 3/170 (1%)

Query: 21  GIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIP---IRVSVKAKFTDSPAFIYFVAA 77
           G ++ LR LLF+ +L +++V+ TAKQT +V     P   I   V AK+T SPA IY +AA
Sbjct: 38  GANLALRALLFAVSLSALVVLVTAKQTVMVPFVIRPPQFILAPVPAKYTHSPALIYLLAA 97

Query: 78  LSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKG 137
           L   C YS+IT ++S+ ++S  A + + L Y    DV    ++ASATG +G V ++GLKG
Sbjct: 98  LCATCFYSLITAISSVRLLSSSACSAKTLFYLILLDVFYAAVMASATGTAGAVAWVGLKG 157

Query: 138 NSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRIR 187
           NSH+RW KICNVY K+CRHIGS+T ++L+AA++LVLL+ L++YSLY R R
Sbjct: 158 NSHTRWNKICNVYGKFCRHIGSSTFLALIAAIVLVLLAFLNAYSLYRRSR 207

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	188
255551653	201	conserved hypothetical protein [Ricinus	0.920	0.860	0.678	3e-55
224102631	196	predicted protein [Populus trichocarpa]	0.962	0.923	0.605	2e-53
388503428	190	unknown [Lotus japonicus]	0.861	0.852	0.585	2e-47
351726435	193	CASP-like protein 7 [Glycine max] gi|288	0.882	0.860	0.570	1e-45
225432376	208	PREDICTED: UPF0497 membrane protein 15 [	0.904	0.817	0.582	3e-44
351721899	193	CASP-like protein 8 [Glycine max] gi|288	0.882	0.860	0.547	4e-44
341958524	194	RecName: Full=CASP-like protein Ni6 gi|2	0.888	0.860	0.578	3e-43
297736907	148	unnamed protein product [Vitis vinifera]	0.787	1.0	0.601	8e-43
449495387	195	PREDICTED: CASP-like protein 8-like [Cuc	0.904	0.871	0.541	4e-41
297804684	194	integral membrane family protein [Arabid	0.872	0.845	0.575	1e-40

>gi|255551653|ref|XP_002516872.1| conserved hypothetical protein [Ricinus communis] gi|238055376|sp|B9RT03.1|CSPL5_RICCO RecName: Full=CASP-like protein RCOM_0679870 gi|223543960|gb|EEF45486.1| conserved hypothetical protein [Ricinus communis]

 Score =  219 bits (559), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 118/174 (67%), Positives = 144/174 (82%), Gaps = 1/174 (0%)

Query: 15  VRENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIP-IRVSVKAKFTDSPAFIY 73
           +R +YF +DVGLRV LF+ TL +++VM+TAKQTEL    G+P +RV V+AKF  SPAFIY
Sbjct: 25  LRRDYFAVDVGLRVFLFATTLTAIVVMSTAKQTELAPVPGVPGLRVPVEAKFNHSPAFIY 84

Query: 74  FVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYI 133
           FVAALSVACLYSIIT LASL V++KP  A + L Y+A WDV+MLGIVA+ATGA+GGV YI
Sbjct: 85  FVAALSVACLYSIITTLASLGVIAKPIYATKFLFYYALWDVLMLGIVAAATGAAGGVAYI 144

Query: 134 GLKGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRIR 187
           GLKGNSH+RWTKICNVYD +C+H+GSA  +SL A+V+LVLL MLS  SLY R+R
Sbjct: 145 GLKGNSHTRWTKICNVYDTFCKHVGSALAISLAASVVLVLLIMLSVCSLYSRVR 198

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102631|ref|XP_002312755.1| predicted protein [Populus trichocarpa] gi|341958560|sp|B9HMP5.1|CSPLD_POPTR RecName: Full=CASP-like protein POPTRDRAFT_820933 gi|222852575|gb|EEE90122.1| predicted protein [Populus trichocarpa]

 Score =  214 bits (544), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 112/185 (60%), Positives = 146/185 (78%), Gaps = 4/185 (2%)

Query: 2   ASEAPAKYEDQRAVRENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSV 61
           + EAPA +      R NY  + V LR LLF+A++ +V+VM TAKQT++V   G PI V +
Sbjct: 14  SEEAPAAHPR----RSNYSSVHVALRFLLFAASVTAVVVMVTAKQTKIVPVPGFPISVPL 69

Query: 62  KAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVA 121
           +AKF+DSPAFIYF++ALSVA LY I+T LA++S+V KPA A R LL+FA  DV+MLGIVA
Sbjct: 70  EAKFSDSPAFIYFISALSVAGLYGILTTLAAISIVLKPAYATRFLLHFALLDVLMLGIVA 129

Query: 122 SATGASGGVGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYS 181
           SATGA+GGV Y+GLKGNSH RW K+CNVYDK+C+H+GS+  V+L A+VLLVLL+MLS +S
Sbjct: 130 SATGAAGGVAYVGLKGNSHVRWGKVCNVYDKFCQHVGSSIAVALFASVLLVLLTMLSVFS 189

Query: 182 LYLRI 186
           +Y +I
Sbjct: 190 IYRKI 194

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388503428|gb|AFK39780.1| unknown [Lotus japonicus]

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 99/169 (58%), Positives = 127/169 (75%), Gaps = 7/169 (4%)

Query: 18  NYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAA 77
           +YF  D+ LR LLF+++LV+V+VM T+ QTE V P   P      AKF  SPAFIYFVAA
Sbjct: 27  DYFHFDLILRFLLFASSLVAVVVMVTSNQTEYV-PLPRP------AKFRYSPAFIYFVAA 79

Query: 78  LSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKG 137
            SV+ LYSI+T LASLSV+ KPA   + LLYF FWD ++LGI+ASATG +GGV Y+GLKG
Sbjct: 80  FSVSGLYSILTALASLSVIRKPALKTKFLLYFLFWDALILGILASATGTAGGVAYVGLKG 139

Query: 138 NSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRI 186
           N+H  W KICNVYDKYCRH+G + GV L+ +++ VLL  LS++SL+ R+
Sbjct: 140 NNHVGWHKICNVYDKYCRHVGGSIGVGLVGSIVSVLLVWLSAFSLHSRV 188

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726435|ref|NP_001238662.1| CASP-like protein 7 [Glycine max] gi|288559198|sp|C6SVQ5.1|CSPL7_SOYBN RecName: Full=CASP-like protein 7 gi|255625967|gb|ACU13328.1| unknown [Glycine max]

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 97/170 (57%), Positives = 126/170 (74%), Gaps = 4/170 (2%)

Query: 18  NYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAA 77
           +YF  DV LR LLF+A+LV+V+V+ TA QTE++    +P  V   AKF  SPAF+YFVAA
Sbjct: 25  DYFKFDVILRFLLFAASLVAVVVIVTANQTEVIR---VPQPVPWPAKFRYSPAFVYFVAA 81

Query: 78  LSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKG 137
           LSV  LYSIIT LASL   +KPA   +LLLYF  WD ++LGI+ASATG +GGV Y+GLKG
Sbjct: 82  LSVTGLYSIITTLASLLASNKPALKTKLLLYFILWDALILGIIASATGTAGGVAYLGLKG 141

Query: 138 NSH-SRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRI 186
           N H   W KIC+VYDK+CRH+G++  V+L  +V+ VLL  LS+YS++ R+
Sbjct: 142 NRHVVGWNKICHVYDKFCRHVGASIAVALFGSVVTVLLIWLSAYSIHSRV 191

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432376|ref|XP_002276229.1| PREDICTED: UPF0497 membrane protein 15 [Vitis vinifera] gi|226713780|sp|A7NW79.2|CSPL7_VITVI RecName: Full=CASP-like protein VIT_05s0020g01830

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/170 (58%), Positives = 130/170 (76%)

Query: 19  YFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAAL 78
           Y  +DV LR+LL  + + SV+VM T+ QT+L++ AG+P+ VS KAKF +SPAFIYFVAAL
Sbjct: 39  YSALDVVLRILLLGSAVASVVVMVTSVQTKLIAVAGVPVLVSNKAKFQNSPAFIYFVAAL 98

Query: 79  SVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGN 138
           SV  LYSIIT LAS   +SKP+ + + +L+ A WDV+MLG+ ASATG +GGV Y+GLKGN
Sbjct: 99  SVVGLYSIITTLASFIFISKPSCSTKTILHLAIWDVLMLGLAASATGTAGGVAYVGLKGN 158

Query: 139 SHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRIRD 188
           SH  W K+CN YDK+CRH+G +  V+L A++LLVLL  LS ++LY RIR 
Sbjct: 159 SHVGWNKVCNTYDKFCRHVGGSIAVALFASILLVLLVWLSLFTLYSRIRK 208

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721899|ref|NP_001237481.1| CASP-like protein 8 [Glycine max] gi|288559102|sp|C6SXZ3.1|CSPL8_SOYBN RecName: Full=CASP-like protein 8 gi|255627543|gb|ACU14116.1| unknown [Glycine max]

 Score =  182 bits (463), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 93/170 (54%), Positives = 125/170 (73%), Gaps = 4/170 (2%)

Query: 18  NYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAA 77
           +YF  DV LR +LF+A+LV+V+V+ T  QTE++    +P  V   AKF  +PAF+YFVAA
Sbjct: 25  DYFKFDVILRFVLFAASLVAVVVIVTGNQTEVIL---VPQPVPWPAKFRYTPAFVYFVAA 81

Query: 78  LSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKG 137
           LSV  LYSIIT LASL   +KPA   +LL YF  WD ++LGI+ASATG +GGV Y+GLKG
Sbjct: 82  LSVTGLYSIITTLASLFASNKPALKTKLLPYFILWDALILGIIASATGTAGGVAYLGLKG 141

Query: 138 NSH-SRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRI 186
           NSH   W KIC+VYDK+CRH+G++  V+L  +++ VLL  LS+YS++ R+
Sbjct: 142 NSHVVGWNKICHVYDKFCRHVGASIAVALFGSIVTVLLIWLSAYSIHSRV 191

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|341958524|sp|D2KQI6.1|CSPL1_BETMR RecName: Full=CASP-like protein Ni6 gi|281494397|gb|ADA71986.1| Ni6 protein [Beta vulgaris subsp. maritima]

 Score =  179 bits (455), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 99/171 (57%), Positives = 123/171 (71%), Gaps = 4/171 (2%)

Query: 17  ENYFGIDVGLRVLLFSATLVSVIVMATAKQTEL-VSPAGIPIRVSVKAKFTDSPAFIYFV 75
             Y  +DV LRVLL +A++ SV++M T+KQTE+ VSP G        AKF +SPAFIY V
Sbjct: 24  NKYRVVDVILRVLLLAASIASVVLMVTSKQTEIIVSPFG---SRPNAAKFQNSPAFIYLV 80

Query: 76  AALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGL 135
           AALSVA LYSIIT L SLS + KP    +L       DV++LGIVA+ATG +GGVGYIGL
Sbjct: 81  AALSVAGLYSIITALVSLSYMRKPIVPPKLFWILLIHDVLLLGIVAAATGTAGGVGYIGL 140

Query: 136 KGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRI 186
           KGN+H RW KI NVYDK+CRH+G++  VSL AA +LVLL  +++ SLY RI
Sbjct: 141 KGNTHVRWGKIRNVYDKFCRHVGASIIVSLFAAAVLVLLVFVNANSLYRRI 191

Source: Beta vulgaris subsp. maritima

Species: Beta vulgaris

Genus: Beta

Family: Amaranthaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297736907|emb|CBI26108.3| unnamed protein product [Vitis vinifera]

 Score =  178 bits (452), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 89/148 (60%), Positives = 115/148 (77%)

Query: 41  MATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPA 100
           M T+ QT+L++ AG+P+ VS KAKF +SPAFIYFVAALSV  LYSIIT LAS   +SKP+
Sbjct: 1   MVTSVQTKLIAVAGVPVLVSNKAKFQNSPAFIYFVAALSVVGLYSIITTLASFIFISKPS 60

Query: 101 SAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNSHSRWTKICNVYDKYCRHIGSA 160
            + + +L+ A WDV+MLG+ ASATG +GGV Y+GLKGNSH  W K+CN YDK+CRH+G +
Sbjct: 61  CSTKTILHLAIWDVLMLGLAASATGTAGGVAYVGLKGNSHVGWNKVCNTYDKFCRHVGGS 120

Query: 161 TGVSLLAAVLLVLLSMLSSYSLYLRIRD 188
             V+L A++LLVLL  LS ++LY RIR 
Sbjct: 121 IAVALFASILLVLLVWLSLFTLYSRIRK 148

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449495387|ref|XP_004159824.1| PREDICTED: CASP-like protein 8-like [Cucumis sativus]

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 92/170 (54%), Positives = 125/170 (73%)

Query: 18  NYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAA 77
           N F + V LR ++F+A + SV+VM T+KQT +    G+P    V+AKF DSPAF YFVAA
Sbjct: 25  NLFLVGVVLRFVVFAAAVSSVVVMVTSKQTVVNKLRGVPPGFPVEAKFDDSPAFRYFVAA 84

Query: 78  LSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKG 137
           LSVA  YS++T L+SL V++KP    + LL++A WD  +LG+VASATGA+GGV YIGLKG
Sbjct: 85  LSVAAFYSLVTGLSSLFVIAKPNCHTKSLLHYAIWDTFILGVVASATGAAGGVAYIGLKG 144

Query: 138 NSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRIR 187
           N+H RW K+C  +DK+CRH+G++   SL A+V++VLL  +S  SL+ RIR
Sbjct: 145 NTHVRWDKVCYAFDKFCRHVGASLATSLFASVVMVLLIWISIISLHARIR 194

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297804684|ref|XP_002870226.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|341958534|sp|D7MAF7.1|CSPL6_ARALL RecName: Full=CASP-like protein ARALYDRAFT_915236 gi|297316062|gb|EFH46485.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/165 (57%), Positives = 121/165 (73%), Gaps = 1/165 (0%)

Query: 23  DVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVAC 82
            V LR +LF+ATL S++VM T+KQT+ +   G PIR+   AKFT+SPA IYFV ALSVAC
Sbjct: 31  QVVLRFVLFAATLTSIVVMVTSKQTKNIFIPGTPIRIPA-AKFTNSPALIYFVVALSVAC 89

Query: 83  LYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNSHSR 142
            YSI++   ++S   K + +  LLL  A  D VM+GIVASATGA GGV Y+GLKGN   R
Sbjct: 90  FYSIVSTFVTVSAFKKHSCSAILLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEVR 149

Query: 143 WTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSLYLRIR 187
           W KICN+YDK+CRH+G A  VSL A+V+L+LLS++S  SLY +IR
Sbjct: 150 WGKICNIYDKFCRHVGGAIAVSLFASVILLLLSIISVLSLYKKIR 194

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	188
TAIR|locus:2130479	193	AT4G15610 "AT4G15610" [Arabido	0.739	0.720	0.478	1.1e-30
TAIR|locus:2081091	199	AT3G06390 "AT3G06390" [Arabido	0.739	0.698	0.474	1.6e-29
TAIR|locus:2130494	190	AT4G15620 "AT4G15620" [Arabido	0.702	0.694	0.297	6e-16
TAIR|locus:2130509	190	AT4G15630 "AT4G15630" [Arabido	0.75	0.742	0.292	7.7e-16
TAIR|locus:2128649	197	AT4G20390 "AT4G20390" [Arabido	0.696	0.664	0.306	1.3e-15
TAIR|locus:2163386	197	AT5G44550 [Arabidopsis thalian	0.702	0.670	0.338	1.6e-15
TAIR|locus:2035791	209	AT1G14160 "AT1G14160" [Arabido	0.723	0.650	0.285	7.4e-11
TAIR|locus:2150986	187	CASP5 "Casparian strip membran	0.696	0.700	0.294	7.4e-11
TAIR|locus:2053514	206	CASP1 "AT2G36100" [Arabidopsis	0.702	0.640	0.273	2e-10
UNIPROTKB|A2Y2B7	162	BLE3 "CASP-like protein BLE3"	0.643	0.746	0.296	5.2e-10

TAIR|locus:2130479 AT4G15610 "AT4G15610" [Arabidopsis thaliana (taxid:3702)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 67/140 (47%), Positives = 89/140 (63%)

Query:    24 VGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACL 83
             V LR +LF+ATL S++VM T+KQT+ +   G PIR+   A+FT+SPA IYFV ALSVAC 
Sbjct:    31 VVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIRIPA-AEFTNSPALIYFVVALSVACF 89

Query:    84 YSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNSHSRW 143
             YSI++   ++S   K + +  LLL  A  D VM+              Y+GLKGN   RW
Sbjct:    90 YSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEVRW 149

Query:   144 TKICNVYDKYCRHIGSATGV 163
              KIC++YDK+CRH+G A  V
Sbjct:   150 GKICHIYDKFCRHVGGAIAV 169

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2081091 AT3G06390 "AT3G06390" [Arabidopsis thaliana (taxid:3702)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 66/139 (47%), Positives = 86/139 (61%)

Query:    22 IDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVA 81
             ID+  RVLLFSATL ++IVM T+ QTE+    G+     V A+F DSPAFIYFV AL VA
Sbjct:    37 IDIITRVLLFSATLTALIVMVTSDQTEMTQLPGVSSPAPVSAEFNDSPAFIYFVVALVVA 96

Query:    82 CLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNSHS 141
               Y++I+ L S+S++ KP    +  +Y A  D+VML              YI LKGN   
Sbjct:    97 SFYALISTLVSISLLLKPEFTAQFSIYLASLDMVMLGILASATGTAGGVAYIALKGNEEV 156

Query:   142 RWTKICNVYDKYCRHIGSA 160
              W KICNVYDK+CR+I ++
Sbjct:   157 GWNKICNVYDKFCRYIATS 175

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2130494 AT4G15620 "AT4G15620" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 41/138 (29%), Positives = 76/138 (55%)

Query:    21 GIDVGLRVLLFSATLVSVIVMATAKQTELVS----PAGIPIRVSVKAKFTDSPAFIYFVA 76
             G+++ +RVL    T+ +  V+  AKQT++VS    P   P+ ++  AK +   AF+Y ++
Sbjct:    26 GVELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAFVYNIS 85

Query:    77 ALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLK 136
               ++AC Y+ I++  ++ ++S+   +K+LL+     D+VM+               +GL 
Sbjct:    86 VNAIACGYTAISI--AILMISRGRRSKKLLMVVLLGDLVMVALLFSGTGAASAIGLMGLH 143

Query:   137 GNSHSRWTKICNVYDKYC 154
             GN H  W K+C V+ K+C
Sbjct:   144 GNKHVMWKKVCGVFGKFC 161

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2130509 AT4G15630 "AT4G15630" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 43/147 (29%), Positives = 77/147 (52%)

Query:    21 GIDVGLRVLLFSATLVSVIVMATAKQTELVS----PAGIPIRVSVKAKFTDSPAFIYFVA 76
             G+++ +RVL    T+V+  V+  AKQT++V     P   P+ VS  AK +   AF+Y ++
Sbjct:    26 GLELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNIS 85

Query:    77 ALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLK 136
             A ++AC Y+ I+++  + ++SK   +K LL+     D++M+               +G  
Sbjct:    86 ANAIACGYTAISIV--IVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGRH 143

Query:   137 GNSHSRWTKICNVYDKYCRHIGSATGV 163
             GN H  W K+C V+ K+C     +  +
Sbjct:   144 GNKHVMWKKVCGVFGKFCNQAAVSVAI 170

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0043424 "protein histidine kinase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2128649 AT4G20390 "AT4G20390" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 42/137 (30%), Positives = 75/137 (54%)

Query:    24 VGLRVLLFSATLVSVIVMATAKQTE--LVSPAG-IPIRVSVKAKFTDSPAFIYFVAALSV 80
             +GLR+  F ATL + IVM+  K+T+  +V+  G +PI+ ++ AKF  +PAF++FV A  +
Sbjct:    20 LGLRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLTAKFQHTPAFVFFVIANVM 79

Query:    81 ACLYSIITMLASLSVVSKPASAKRL-LLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNS 139
                ++++ ++  + + S+    K L LL  A  D++                 +G  GN 
Sbjct:    80 VSFHNLLMIV--VQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNGNK 137

Query:   140 HSRWTKICNVYDKYCRH 156
             H++W K+C+ +  YC H
Sbjct:   138 HAKWNKVCDRFTTYCDH 154

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0000041 "transition metal ion transport" evidence=RCA

TAIR|locus:2163386 AT5G44550 [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 46/136 (33%), Positives = 71/136 (52%)

Query:    24 VGLRVLLFSATLVSVIVMATAKQTE--LVSPAG-IPIRVSVKAKFTDSPAFIYFVAALSV 80
             +GLR+L FSATL + IVM   K+T+  +V   G  PI+ +  AKF  +PAF++FV A ++
Sbjct:    20 LGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTPIQATFTAKFDHTPAFVFFVVANAM 79

Query:    81 ACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNSH 140
                ++++ M+A      K       LL  A  D++ +               +G  GN H
Sbjct:    80 VSFHNLL-MIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNGNKH 138

Query:   141 SRWTKICNVYDKYCRH 156
             +RW KIC+ +  YC H
Sbjct:   139 ARWDKICDRFATYCDH 154

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2035791 AT1G14160 "AT1G14160" [Arabidopsis thaliana (taxid:3702)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 42/147 (28%), Positives = 73/147 (49%)

Query:    21 GIDV-GLRVLLFSA--TLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAA 77
             GI V G  + LF+   T+ S + M T  ++ +VS + +   V +K K++D P  ++FV A
Sbjct:    47 GISVLGFVLRLFAVFGTIGSALAMGTTHES-VVSLSQL---VLLKVKYSDLPTLMFFVVA 102

Query:    78 LSVACLYSIITMLASL-SVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLK 136
              +++  Y ++++  S+  + S  A   R++L     D VML              Y+  +
Sbjct:   103 NAISGGYLVLSLPVSIFHIFSTQAKTSRIILLVV--DTVMLALVSSGASAATATVYLAHE 160

Query:   137 GNSHSRWTKICNVYDKYCRHI-GSATG 162
             GN+ + W  IC  +D +C  I GS  G
Sbjct:   161 GNTTANWPPICQQFDGFCERISGSLIG 187

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2150986 CASP5 "Casparian strip membrane domain protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 41/139 (29%), Positives = 65/139 (46%)

Query:    26 LRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYS 85
             LR++ F  T+ S I+M T  +T    P      +  +A++ D PA  +FV A +V   Y 
Sbjct:    32 LRIVAFFNTIGSAILMGTTHET---LPFFTQF-IRFQAEYNDLPALTFFVVANAVVSGYL 87

Query:    86 IITM-LASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNSHSRWT 144
             I+++ LA + +V +     R+LL     DV ML              Y+   GN+ + W 
Sbjct:    88 ILSLTLAFVHIVKRKTQNTRILLIIL--DVAMLGLLTSGASSAAAIVYLAHNGNNKTNWF 145

Query:   145 KICNVYDKYCRHI-GSATG 162
              IC  ++ +C  I GS  G
Sbjct:   146 AICQQFNSFCERISGSLIG 164

GO:0005739 "mitochondrion" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2053514 CASP1 "AT2G36100" [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 38/139 (27%), Positives = 67/139 (48%)

Query:    23 DVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVAC 82
             D  LR+   + T+ +  VM TA++T    P      +  +A + D PAF YFV A++V  
Sbjct:    49 DFLLRLAAIAVTIGAASVMYTAEET---LPFFTQF-LQFQAGYDDLPAFQYFVIAVAVVA 104

Query:    83 LYSIITMLASL-SVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNSHS 141
              Y ++++  S+ S+V   A A RL+L     D +++              Y+   GN  +
Sbjct:   105 SYLVLSLPFSIVSIVRPHAVAPRLILLIC--DTLVVTLNTSAAAAAASITYLAHNGNQST 162

Query:   142 RWTKICNVYDKYCRHIGSA 160
              W  IC  +  +C+++ +A
Sbjct:   163 NWLPICQQFGDFCQNVSTA 181

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0048226 "Casparian strip" evidence=IDA

UNIPROTKB|A2Y2B7 BLE3 "CASP-like protein BLE3" [Oryza sativa Indica Group (taxid:39946)]

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 40/135 (29%), Positives = 65/135 (48%)

Query:    26 LRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYS 85
             LR+   +A   + +VM T+++T   S  GI     ++AK++ +P+FI+FV A +VA  YS
Sbjct:    12 LRLAAAAAAATAAVVMVTSRET--TSFFGI----QMEAKYSYTPSFIFFVVAYAVAAAYS 65

Query:    86 IITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXXYIGLKGNSHSRWTK 145
             ++ +      V   ++  RL L     DVV+                I   GNSH+ W  
Sbjct:    66 LLVL-----AVPAGSALSRLALTT---DVVLGMVLAGAVASAGAISDIAKNGNSHAGWLP 117

Query:   146 ICNVYDKYCRHIGSA 160
             +C     YC H+ +A
Sbjct:   118 VCGQIHAYCNHVMAA 132

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0009741 "response to brassinosteroid stimulus" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A7NW79	CSPL7_VITVI	No assigned EC number	0.5823	0.9042	0.8173	yes	no
B9RT03	CSPL5_RICCO	No assigned EC number	0.6781	0.9202	0.8606	N/A	no
Q6YT98	CSPL7_ORYSJ	No assigned EC number	0.4941	0.8882	0.8067	yes	no
D2KQI6	CSPL1_BETVM	No assigned EC number	0.5789	0.8882	0.8608	N/A	no
D7MAF7	CSPL6_ARALL	No assigned EC number	0.5757	0.8723	0.8453	N/A	no
C6SVQ5	CSPL7_SOYBN	No assigned EC number	0.5705	0.8829	0.8601	yes	no
Q9FE29	CSPLM_ARATH	No assigned EC number	0.5636	0.8723	0.8497	yes	no
B9HMP5	CSPLD_POPTR	No assigned EC number	0.6054	0.9627	0.9234	yes	no
B6U361	CSPL3_MAIZE	No assigned EC number	0.5088	0.8829	0.8217	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_VIII1846 hypothetical protein (196 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	188
TIGR01569	154	TIGR01569, A_tha_TIGR01569, plant integral membran	6e-40
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	8e-34

>gnl|CDD|233471 TIGR01569, A_tha_TIGR01569, plant integral membrane protein TIGR01569

 Score =  132 bits (334), Expect = 6e-40
 Identities = 69/159 (43%), Positives = 101/159 (63%), Gaps = 5/159 (3%)

Query: 24  VGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACL 83
           + LRVL FSATL + IVM T ++T++V    I      KAKF+D PAF+YFV A ++AC 
Sbjct: 1   LILRVLAFSATLAAAIVMGTNRETKVVFVQLIT----FKAKFSDLPAFVYFVVANAIACG 56

Query: 84  YSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNSHSRW 143
           YS+++++ S+  + K       L+   F D+VML +++S T A+  V Y+G  GN  + W
Sbjct: 57  YSLLSLVVSIFGLLKR-RVFFKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGW 115

Query: 144 TKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSL 182
            KIC V+ K+C  I  +  +SL A +LLVLLS+LS+ SL
Sbjct: 116 LKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAISL 154

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized. Length = 154

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score =  117 bits (294), Expect = 8e-34
 Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 7/151 (4%)

Query: 21  GIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSV 80
             ++ LR+  F   L + +VM T KQT+          +  KA F+D PAF Y V A ++
Sbjct: 6   LAELVLRLAAFVLALAAAVVMGTNKQTKPFFF------IQKKASFSDLPAFRYLVVANAI 59

Query: 81  ACLYSIITMLAS-LSVVSKPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNS 139
           A  YS++ ++ S   +  K    K L       D VM  ++ +A  A+  + Y+   GNS
Sbjct: 60  AAGYSLLQLVLSVYLLSRKKPRTKGLAWLLFILDQVMAYLLLAAASAAAAIVYLARNGNS 119

Query: 140 HSRWTKICNVYDKYCRHIGSATGVSLLAAVL 170
           H+ W KICN + ++C    ++  +S LA +L
Sbjct: 120 HANWMKICNQFGRFCNRAAASVALSFLAFLL 150

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	188
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	100.0
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	100.0
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	98.55

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=100.00  E-value=2.1e-45  Score=290.95  Aligned_cols=154  Identities=44%  Similarity=0.722  Sum_probs=142.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccceeecCCCcccccceeeeecchhHHHHHHHHHHHHHHHHHHHHHHHhHhccCCCchh
Q 029779           24 VGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAK  103 (188)
Q Consensus        24 l~LR~~a~~~~l~a~~vM~t~~q~~~~~~~~~~~~~~~~a~f~~~~af~ylv~an~i~~~Ysllql~~~~~~~~~~~~~~  103 (188)
                      ++||+++++++++|+++|+||+|+.++..+    .+++++||+|+++|+|+|++|+|+|+|+++|++++++.++++... 
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~~----~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~~~~-   75 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFVQ----LITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKRRVF-   75 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeecc----cceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccch-
Confidence            479999999999999999999999988621    378899999999999999999999999999999998755544333 


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCccchhhhccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 029779          104 RLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSMLSSYSL  182 (188)
Q Consensus       104 ~~~~~~f~~Dqv~ayLL~saasAAa~i~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Si~lsflA~~~~~~~s~lSa~~L  182 (188)
                      ...|++|++||+++|+++||++||+++++++++||+|.+|+|+|+++++||||+.+|++++|+|++++++++++|++++
T Consensus        76 ~~~~~~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~~~~FC~~~~~sl~~s~~a~v~~~llsv~Sa~~~  154 (154)
T TIGR01569        76 FKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAISL  154 (154)
T ss_pred             hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4589999999999999999999999999999999999999999999999999999999999999999999999999985

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=100.00  E-value=3.5e-40  Score=259.24  Aligned_cols=148  Identities=36%  Similarity=0.598  Sum_probs=137.2

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHhcccceeecCCCcccccceeeeecchhHHHHHHHHHHHHHHHHHHHHHHHhHhc
Q 029779           17 ENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVV   96 (188)
Q Consensus        17 ~~~~~~~l~LR~~a~~~~l~a~~vM~t~~q~~~~~~~~~~~~~~~~a~f~~~~af~ylv~an~i~~~Ysllql~~~~~~~   96 (188)
                      |+.+..+++||+++++++++|+++|++|+||.++.      .++.+++|+|+++|+|+|++|+|+|+|+++|++.+++.+
T Consensus         1 ~~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~~------~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~~~   74 (149)
T PF04535_consen    1 RSLRIASLVLRLLAFVLSLAALAVMATNKQTVSVF------SIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIYSL   74 (149)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhcCCcceee------ccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999886      688899999999999999999999999999999998745


Q ss_pred             c-CCCchhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCccchhhhccchhhhhhhHHHHHHHHHHHHHH
Q 029779           97 S-KPASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVL  170 (188)
Q Consensus        97 ~-~~~~~~~~~~~~f~~Dqv~ayLL~saasAAa~i~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Si~lsflA~~~  170 (188)
                      . ++.+++...|++|++||+++||++|+++||+++++++++||+|.+|+++|+.+++||+|+++|++++|+|+++
T Consensus        75 ~~~~~~~~~~~~~~f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~~~~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   75 SRGKLRSKLLAWFLFILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQFGKFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             HccCCcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccchhhHHHHHHHHHHHHHHHHHC
Confidence            3 3344567799999999999999999999999999999999999999999999999999999999999999874

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=98.55  E-value=2.2e-06  Score=65.27  Aligned_cols=141  Identities=16%  Similarity=0.034  Sum_probs=96.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcccceeecCCCcccccceeeeecchhHHHHHHHHHHHHHHHHHHHHHHHhHhccCC
Q 029779           20 FGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKP   99 (188)
Q Consensus        20 ~~~~l~LR~~a~~~~l~a~~vM~t~~q~~~~~~~~~~~~~~~~a~f~~~~af~ylv~an~i~~~Ysllql~~~~~~~~~~   99 (188)
                      +....+||+++++++++.+.+++....+...            ......++..|.+.+.++...+++.-++..... .+.
T Consensus         3 ~s~~~ilR~lq~~~~~i~~~l~~~~~~~~~~------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~~   69 (144)
T PF01284_consen    3 RSPSGILRILQLVFALIIFGLVASSIATGSQ------------IYGGSPSACGFALFVAVLSFLYTLIFLLLYLFS-LKY   69 (144)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHHHhcccc------------ccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH-Hhc
Confidence            4467899999999999999999987643222            134455778899999999999988877765432 111


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCccchhhhccchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 029779          100 ASAKRLLLYFAFWDVVMLGIVASATGASGGVGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGVSLLAAVLLVLLSM  176 (188)
Q Consensus       100 ~~~~~~~~~~f~~Dqv~ayLL~saasAAa~i~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Si~lsflA~~~~~~~s~  176 (188)
                      ..+....+..+..|.+++.+-+.+..+-+.-..-.+.+++   +.+-+...++-|+...++.+++|+.++.+..+.+
T Consensus        70 ~~~~~~~~~~~~~~~v~~il~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~Aa~~f~~~~~~l~~~s~~  143 (144)
T PF01284_consen   70 RPRIPWPLVEFIFDAVFAILWLAAFIALAAYLSDHSCSNT---GNDYSYSGCSRCGAWKAAAAFGFLNWLLFIVSAV  143 (144)
T ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHHHHHhcCcccccC---CCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            1222334568899999999888765443332211111111   2223344567899999999999999999988765

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00