Citrus Sinensis ID: 029814

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------
Protein Sequence
MRVRGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLIKYSKLIDNSHHPPSSNYKRSLHFVPSTSSIKRQAQDDIHSHHDPKPKPNPKSMPLIKLPLASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRAEFWPC
Secondary Structure (PSIPRED)
ccccccccccccccEEEEccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEcHHHHHHHHHHHHcccccEEEEEEEcccccEEEEEEccHHHHHHHHHccccEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccEcccccccEEEEccccccccEEEccccccccccccccccccccccHEHcccccccccccccccccccEccccccccccccccccccccccccccccccccccHcccccccccccEEEEEEEEEEcccHHHHHHHHHHHHccccEEEEEEccccEEEEEEcccHHHHHHHHHHccccEEccc
Coil and Loop (DISEMBL)
mrvrglmcqsTAAATavcmpndsassvivprsrrppaddhyrntpidddhtRLIKYSklidnshhppssnykrslhfvpstssikrqaqddihshhdpkpkpnpksmpliklplassdqVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMghisptgvlesiskvkraefwpc
Flexible Loop (DISEMBL)
mrvrglmcQSTAaatavcmpndsassvivprsrrppaddhyrntpidddhTRLIKYSKLIDNSHHPPSSNYKRSLHFVPSTSSIKRQAQDDIHSHHDPKPKPNPKSMPLIKLPLASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGhisptgvlesiskvkraefwpc
Low Complexity Region (SEG)
MRVRGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLIKYSKLIDNSHHPPSSNYKRSLHFVPSTSSIKRQAQDDIHSHHDPKPKPNPKSMPLIKLPLASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRAEFWPC
Disordered region (IsUnstruct)
*****************************************************I********************************************************KLPLASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKV********
Disordered Region (DISOPRED)
***************************************************************************************************************************VVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRAEFWPC
Disordered Region (DISEMBL)
MRVRGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLIKYSKLIDNSHHPPSSNYKRSLHFVPST**********************PKSMPLIKLPLASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRAEFWPC
Disordered Region (DISPRO)
************AATAVCMPNDSASSVIVP********************T*L*K**KLIDNSHHPP*SN************************************************QVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRAE*WPC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRVRGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLIKYSKLIDNSHHPPSSNYKRSLHFVPSTSSIKRQAQDDIHSHHDPKPKPNPKSMPLIKLPLASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRAEFWPC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	187	2.2.26 [Sep-21-2011]
Q9SZN7	153	Heavy metal-associated is	no	no	0.352	0.431	0.323	2e-06

>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 121 FQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESIS--K 178
            Q V ++V + C+GC  K+++ +  M+GV+S +++ +  +VTV+G++ P  V+  +S   
Sbjct: 25  LQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRT 84

Query: 179 VKRAEFWP 186
            K+ E WP
Sbjct: 85  GKKVELWP 92

Heavy-metal-binding protein. Binds lead, cadmium and copper. May be involved in heavy-metal transport.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	187
356557541	162	PREDICTED: uncharacterized protein LOC10	0.834	0.962	0.548	2e-38
356510691	166	PREDICTED: uncharacterized protein LOC10	0.791	0.891	0.529	1e-36
296081526	238	unnamed protein product [Vitis vinifera]	0.909	0.714	0.467	2e-35
359485966	193	PREDICTED: uncharacterized protein LOC10	0.839	0.813	0.493	4e-35
147769148	196	hypothetical protein VITISV_043918 [Viti	0.796	0.760	0.552	6e-35
356524858	152	PREDICTED: uncharacterized protein LOC10	0.780	0.960	0.510	2e-33
357147726	187	PREDICTED: uncharacterized protein LOC10	0.930	0.930	0.425	5e-30
218201128	207	hypothetical protein OsI_29189 [Oryza sa	0.962	0.869	0.404	4e-29
115476344	205	Os08g0405700 [Oryza sativa Japonica Grou	0.919	0.839	0.388	4e-28
326499754	192	predicted protein [Hordeum vulgare subsp	0.893	0.869	0.397	7e-28

>gi|356557541|ref|XP_003547074.1| PREDICTED: uncharacterized protein LOC100814406 [Glycine max]

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/186 (54%), Positives = 125/186 (67%), Gaps = 30/186 (16%)

Query: 5   GLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLI---KYSKLID 61
           G MC S  A+TAVC+    A SV+VPR+R   +  H R+  +D   TRLI   KYSKL+D
Sbjct: 4   GFMCHS-EASTAVCI----AGSVVVPRTR---SRRHQRSVSLDG--TRLINYAKYSKLVD 53

Query: 62  NSHHPPSSNYKRSLHFVPSTSSIKRQAQDDIHSHHDPKPKPNPKSMPLIKLPLASSDQVF 121
           +S    SS +          +S  ++   D  S  + K + N +S  L K P   +D VF
Sbjct: 54  SS---TSSRF----------NSAHKKCDSDSVSVPNIKHQEN-ESRELQKKP---TDNVF 96

Query: 122 QVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
           QVVVMRV++HCQGCAGK+KKHLSKMEGVTSFS+D+E+KRVTVMGHISP GVLESISKVKR
Sbjct: 97  QVVVMRVAIHCQGCAGKVKKHLSKMEGVTSFSVDVESKRVTVMGHISPVGVLESISKVKR 156

Query: 182 AEFWPC 187
           AEFW C
Sbjct: 157 AEFWDC 162

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510691|ref|XP_003524069.1| PREDICTED: uncharacterized protein LOC100802591 [Glycine max]

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/185 (52%), Positives = 117/185 (63%), Gaps = 37/185 (20%)

Query: 4   RGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLI---KYSKLI 60
           RG MC S  A+TAVCM      SV+VP+          R   +DD  TRLI   KYSKL+
Sbjct: 13  RGFMCHS-QASTAVCMSTRDPRSVVVPKKLE-------RRVFLDD--TRLINYAKYSKLV 62

Query: 61  DNSHHPPSSNYKRSLHFVPSTSSIKRQAQDDIHSHHDPKPKPNPKSMPLIKLPLASSDQV 120
           +    PP SN       VP    IK + QD + ++        P+ +    L   + + V
Sbjct: 63  E----PPRSNP------VPK---IKLRGQDQVQANE-------PREL----LKTQTDNNV 98

Query: 121 FQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVK 180
           FQVVVMRV++HCQGCAGK+KKHLSKMEGVTSFSID+E+KRVTVMGHISP  VLESISKVK
Sbjct: 99  FQVVVMRVAIHCQGCAGKVKKHLSKMEGVTSFSIDVESKRVTVMGHISPVEVLESISKVK 158

Query: 181 RAEFW 185
           RAEFW
Sbjct: 159 RAEFW 163

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081526|emb|CBI20049.3| unnamed protein product [Vitis vinifera]

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/218 (46%), Positives = 126/218 (57%), Gaps = 48/218 (22%)

Query: 2   RVRGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLI---KYSK 58
           ++RGLMC S  AATAVC+P D   SVIVPR          R      DH+RLI   KYS+
Sbjct: 37  KMRGLMCHS-PAATAVCIPGD-PRSVIVPR----------RPDRTLVDHSRLINNAKYSR 84

Query: 59  LIDNSHHPPSSNYKRSLHFVPSTSSIKRQAQDDIHSHHDPKPKPNP-------------- 104
           L+++    P++  KRS+  VP+     R + + +   H P   P+               
Sbjct: 85  LVESHRFTPAA--KRSV-LVPAMKRGHRPSAEPM-PFHPPSSTPSLDHVFQVRFMIICKE 140

Query: 105 ---------------KSMPLIKLPLASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGV 149
                            + +I L +     +F VVVMRVSLHCQGCAGK+KKHLSKMEGV
Sbjct: 141 IFKYFLITKLLNMSFYKIKIISLYMHCQKNIFNVVVMRVSLHCQGCAGKVKKHLSKMEGV 200

Query: 150 TSFSIDLETKRVTVMGHISPTGVLESISKVKRAEFWPC 187
           TSFSIDLETKRVTVMGH+SP+GVLESISKVK+AE W C
Sbjct: 201 TSFSIDLETKRVTVMGHVSPSGVLESISKVKKAELWSC 238

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485966|ref|XP_002268854.2| PREDICTED: uncharacterized protein LOC100243595 [Vitis vinifera]

 Score =  153 bits (386), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/215 (49%), Positives = 124/215 (57%), Gaps = 58/215 (26%)

Query: 2   RVRGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLI---KYSK 58
           ++RGLMC S  AATAVC+P D   SVIVPR          R      DH+RLI   KYS+
Sbjct: 8   KMRGLMCHS-PAATAVCIPGD-PRSVIVPR----------RPDRTLVDHSRLINNAKYSR 55

Query: 59  LIDNSHHPPSSNYKRSLHFVPSTSSIKRQAQDDIHSHHDPKPKPNPKSMPLIKLPLASSD 118
           L+++    P++  KRS+  VP+     R + +       P P   P S P       S D
Sbjct: 56  LVESHRFTPAA--KRSV-LVPAMKRGHRPSAE-------PMPFHPPSSTP-------SLD 98

Query: 119 QVFQV--------------------------VVMRVSLHCQGCAGKLKKHLSKMEGVTSF 152
            VFQV                          VVMRVSLHCQGCAGK+KKHLSKMEGVTSF
Sbjct: 99  HVFQVRFMIICKVVSPFSTHYHFNHFTNSNVVVMRVSLHCQGCAGKVKKHLSKMEGVTSF 158

Query: 153 SIDLETKRVTVMGHISPTGVLESISKVKRAEFWPC 187
           SIDLETKRVTVMGH+SP+GVLESISKVK+AE W C
Sbjct: 159 SIDLETKRVTVMGHVSPSGVLESISKVKKAELWSC 193

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147769148|emb|CAN60769.1| hypothetical protein VITISV_043918 [Vitis vinifera]

 Score =  152 bits (384), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/181 (55%), Positives = 118/181 (65%), Gaps = 32/181 (17%)

Query: 2   RVRGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLI---KYSK 58
           ++RGLMC S  AATAVC+P D   SVIVPR          R      DH+RLI   KYS+
Sbjct: 8   KMRGLMCHS-PAATAVCIPGD-PRSVIVPR----------RPDRTLVDHSRLINNAKYSR 55

Query: 59  LIDNSHHPPSSNYKRSLHFVPSTSSIKRQAQDDIHSHHDPKPKPNPKSMPLIKLPLASSD 118
           L+++    P++  KRS+  VP+     R + +       P P   P S P       S D
Sbjct: 56  LVESHRFTPAA--KRSV-LVPAMKRGHRPSAE-------PMPFHPPSSTP-------SLD 98

Query: 119 QVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISK 178
            VFQVVVMRVSLHCQGCAGK+KKHLSKMEGVTSFSIDLETKRVTVMGH+SP+GVLESISK
Sbjct: 99  HVFQVVVMRVSLHCQGCAGKVKKHLSKMEGVTSFSIDLETKRVTVMGHVSPSGVLESISK 158

Query: 179 V 179
           +
Sbjct: 159 I 159

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524858|ref|XP_003531045.1| PREDICTED: uncharacterized protein LOC100785162 [Glycine max]

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/182 (51%), Positives = 115/182 (63%), Gaps = 36/182 (19%)

Query: 7   MCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLI---KYSKLIDNS 63
           MC S A+ TAVCM      SV+VP+          R   +DD  TRLI   KYSKL++  
Sbjct: 1   MCHSRAS-TAVCMSTRDPRSVVVPKKLE-------RRVFLDD--TRLINYAKYSKLVE-- 48

Query: 64  HHPPSSNYKRSLHFVPSTSSIKRQAQDDIHSHHDPKPKPNPKSMPLIKLPLASSDQVFQV 123
             PP S+       VP    IK + Q+   ++++P+     ++           + VFQV
Sbjct: 49  --PPRSSP------VPK---IKLRGQEQDQANNEPREFQKKQT----------DNNVFQV 87

Query: 124 VVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRAE 183
           VVMRV++HCQGCAGK+KKHLSKMEGVTSFSID+E+KRVTVMGHISP  VLESISKVKRAE
Sbjct: 88  VVMRVAIHCQGCAGKVKKHLSKMEGVTSFSIDVESKRVTVMGHISPVEVLESISKVKRAE 147

Query: 184 FW 185
           FW
Sbjct: 148 FW 149

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357147726|ref|XP_003574459.1| PREDICTED: uncharacterized protein LOC100834333 [Brachypodium distachyon]

 Score =  135 bits (341), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 115/195 (58%), Gaps = 21/195 (10%)

Query: 1   MRVRGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLIKYSKLI 60
           MR  G++C+S AA TAVC+P D+ S V+  R+ R  A+D      + D     ++Y++L 
Sbjct: 1   MRTGGMLCRSQAA-TAVCVPGDARSMVVGRRADRTIAEDARL---VQD-----VRYARL- 50

Query: 61  DNSHHPPSSNYKRSLHFVPSTSSIKRQAQDDIH--SHHDPKPKPNPKSMPLIKLP----- 113
             +     +   R L    +  +     +      +   P    +PK  P   +      
Sbjct: 51  GGASGCDGAEATRVLSRRRAAPAPAPVPRRRGAPVAVTLPMVTKSPKETPARDMAAAKRT 110

Query: 114 ----LASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISP 169
               +A  DQV QVVVM+V++HCQGCAGK++KH+SKMEGVTSFSIDLE+K+VTVMGH+SP
Sbjct: 111 SAAAVAPGDQVLQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSP 170

Query: 170 TGVLESISKVKRAEF 184
            GVLESISKVK+AE 
Sbjct: 171 EGVLESISKVKKAEL 185

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218201128|gb|EEC83555.1| hypothetical protein OsI_29189 [Oryza sativa Indica Group]

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/210 (40%), Positives = 111/210 (52%), Gaps = 30/210 (14%)

Query: 1   MRVRGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLIKYSKLI 60
           MR  G++C+S AA TAVC+P D+ S ++  R+ R  A+D       D  + RL   S   
Sbjct: 1   MRAGGMLCRSQAA-TAVCVPGDARSMIVSRRADRTIAEDA--RLAHDVRYARLGAASS-- 55

Query: 61  DNSHHPPSSNYKRSLHFVPSTSSIKRQAQDDIHSHHD------------PKPKPNPKSMP 108
                 PS  +      +          Q      H             P    +PK  P
Sbjct: 56  AGGARVPSRRFAAPRQALTPPPPPPPPPQPQPPKQHRRPRRGAGVAVTLPMVTKSPKETP 115

Query: 109 LIKLPLAS-------------SDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSID 155
             ++  A+              DQV QVVVM+V++HCQGCAGK++KH+SKMEGVTSFSID
Sbjct: 116 AREMAAAAAAAKRAPLAAASPGDQVLQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSID 175

Query: 156 LETKRVTVMGHISPTGVLESISKVKRAEFW 185
           LE+K+VTVMGH+SP GVLESISKVK+AE  
Sbjct: 176 LESKKVTVMGHVSPAGVLESISKVKKAELL 205

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115476344|ref|NP_001061768.1| Os08g0405700 [Oryza sativa Japonica Group] gi|37806140|dbj|BAC99589.1| unknown protein [Oryza sativa Japonica Group] gi|113623737|dbj|BAF23682.1| Os08g0405700 [Oryza sativa Japonica Group] gi|215766117|dbj|BAG98345.1| unnamed protein product [Oryza sativa Japonica Group] gi|222640526|gb|EEE68658.1| hypothetical protein OsJ_27250 [Oryza sativa Japonica Group]

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 115/216 (53%), Gaps = 44/216 (20%)

Query: 1   MRVRGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRL---IKYS 57
           MR  G++C+S AA TAVC+P D+ S ++  R+ R  A+D            RL   ++Y+
Sbjct: 1   MRAGGMLCRSQAA-TAVCVPGDARSMIVSRRADRTIAED-----------ARLAHDVRYA 48

Query: 58  KLIDNSH----HPPSSNYKRSLHFVPSTSSIKRQAQDDIHSHHDPKPKPN---------- 103
           +L   +       PS  +      + +              H  P+              
Sbjct: 49  RLGAAASAGGARVPSRRFAAPRQAL-TPPPPPPPPPQPPKQHRRPRRGAGVAVTFPMVTK 107

Query: 104 -PKSMPLIKLPLAS-------------SDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGV 149
            PK  P  ++  A+              DQV QVVVM+V++HCQGCAGK++KH+SKMEGV
Sbjct: 108 SPKETPAREMAAAAAAAKRAPLAAASPGDQVLQVVVMKVAIHCQGCAGKVRKHISKMEGV 167

Query: 150 TSFSIDLETKRVTVMGHISPTGVLESISKVKRAEFW 185
           TSFSIDLE+K+VTVMGH+SP GVLESISKVK+AE  
Sbjct: 168 TSFSIDLESKKVTVMGHVSPAGVLESISKVKKAELL 203

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326499754|dbj|BAJ86188.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  129 bits (323), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 114/209 (54%), Gaps = 42/209 (20%)

Query: 1   MRVRGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRL--IKYSK 58
           MR  G++C+S AA TAVC+P D+ S V+  R+ R           I +D   L  ++Y +
Sbjct: 1   MRAGGMLCRSQAA-TAVCVPGDARSMVVGRRADRAT---------IAEDARVLHDVRYVR 50

Query: 59  LIDNSHHPPSSNYKRSLHFVPSTSSIKRQAQDDIHSHHDPKPKPNPKSMPLI-KLPLAS- 116
           L         +   R         S +R A          +  P   ++P++ K P+ + 
Sbjct: 51  LGGAGVGCDGAGATRV--------SSRRVAPPPPPPMRRRRGAPVAVTLPMVTKSPVETP 102

Query: 117 --------------------SDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDL 156
                                DQ+ QVVVM+V++HCQGCAGK++KH+SKMEGVTSFSIDL
Sbjct: 103 ARDTATAKRAPAAPTAAVAPGDQILQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDL 162

Query: 157 ETKRVTVMGHISPTGVLESISKVKRAEFW 185
           E+K+VTVMGH+SP GVLESISKVK+AE  
Sbjct: 163 ESKKVTVMGHVSPAGVLESISKVKKAELL 191

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	187
TAIR|locus:2181718	319	NAKR1 "SODIUM POTASSIUM ROOT D	0.561	0.329	0.518	1.7e-25
TAIR|locus:2049731	259	NAKR2 "AT2G37390" [Arabidopsis	0.508	0.366	0.494	1.3e-23
TAIR|locus:2065526	265	AT2G28660 "AT2G28660" [Arabido	0.422	0.298	0.604	2.1e-22
TAIR|locus:2083966	248	NAKR3 "SODIUM POTASSIUM ROOT D	0.898	0.677	0.371	1.4e-18
TAIR|locus:2094864	140	AT3G24450 "AT3G24450" [Arabido	0.342	0.457	0.531	7.7e-16
TAIR|locus:2205288	106	ATX1 "homolog of anti-oxidant	0.443	0.783	0.411	1.8e-14
TAIR|locus:2078461	121	CCH "copper chaperone" [Arabid	0.347	0.537	0.454	2.1e-13
TAIR|locus:2180265	352	AT5G27690 [Arabidopsis thalian	0.331	0.176	0.476	1.5e-11
TAIR|locus:1005716648	178	AT2G18196 [Arabidopsis thalian	0.470	0.494	0.351	3.2e-10
TAIR|locus:2133544	150	AT4G08570 "AT4G08570" [Arabido	0.417	0.52	0.387	6.6e-10

TAIR|locus:2181718 NAKR1 "SODIUM POTASSIUM ROOT DEFECTIVE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
 Identities = 57/110 (51%), Positives = 73/110 (66%)

Query:    80 STSSI--KRQAQDDIHSHHDPKPKPNP-KSMPLIKLPLASSDQVFQVVVMRVSLHCQGCA 136
             S SS+  K  +  D      P P P+P +S P    P   +    QVVV+RVSLHC+GCA
Sbjct:   207 SLSSLEDKDVSSPDFKFSPPPPPPPSPPQSSP--PSPPEKNSSSDQVVVLRVSLHCKGCA 264

Query:   137 GKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRAEFWP 186
             GK+KKHLSK++GVTS++ID   K+VTV G ++P  VL SISKVK A+FWP
Sbjct:   265 GKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKNAQFWP 314

GO:0009507 "chloroplast" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009908 "flower development" evidence=IMP

GO:0010015 "root morphogenesis" evidence=IMP

GO:0010233 "phloem transport" evidence=IMP

GO:0055078 "sodium ion homeostasis" evidence=IMP

TAIR|locus:2049731 NAKR2 "AT2G37390" [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
 Identities = 48/97 (49%), Positives = 66/97 (68%)

Query:    89 QDDIHSHHDPKPKPNPKSMPLIKLPLASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEG 148
             QD   +     P    K++   K     +DQ  QVVV++VSLHC+GC GK++KHL++M+G
Sbjct:   150 QDPAKTVEAEAPAGEDKTLTEKKTTCGDTDQ--QVVVLKVSLHCRGCEGKVRKHLARMQG 207

Query:   149 VTSFSIDLETKRVTVMGHISPTGVLESISKVKRAEFW 185
             VTSF+ID   K+VTV G I+P  +L+SISKVK A+FW
Sbjct:   208 VTSFNIDFAAKKVTVTGDITPLEILDSISKVKNAQFW 244

GO:0005575 "cellular_component" evidence=ND

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2065526 AT2G28660 "AT2G28660" [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 49/81 (60%), Positives = 66/81 (81%)

Query:   106 SMPLIKLPLASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG 165
             S+  +  P  S+D   QVVV+RVS+HC+GC GK++KH+SKMEGVTS++IDL TK+VTV+G
Sbjct:   169 SVTNVSSPAPSTDD--QVVVLRVSIHCKGCEGKVRKHISKMEGVTSYTIDLATKKVTVVG 226

Query:   166 HISPTGVLESISKVKRAEFWP 186
              I+P G++ESISKVK A+ WP
Sbjct:   227 KITPVGLVESISKVKFAQLWP 247

GO:0005507 "copper ion binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2083966 NAKR3 "SODIUM POTASSIUM ROOT DEFECTIVE 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 65/175 (37%), Positives = 87/175 (49%)

Query:    15 TAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLIKYSKLIDNSHHPPSSNYKRS 74
             T V   +    SV V + RR  +    +    D    R   +  ++     PP S   R 
Sbjct:    63 TRVPSSSGDGKSVQVDKGRRSNSGSLMKLISYDVSLARK-SFGCVVATPKTPPGST--RY 119

Query:    75 LHFVPSTSSIKRQAQDDIHSHHDPKPKPNPKSM-PLIKLPLASSDQVFQVVVMRVSLHC- 132
             L      S      QD + +       P   S  P+ +   +S     QVVV+RVSLHC 
Sbjct:   120 LLGSDPVSLAGSTGQDTVATEESEASAPKRGSSGPVEEKKKSSGSGSDQVVVLRVSLHCH 179

Query:   133 -QGCAGKLKKHLSKME-GVTSFSIDLETKRVTVMGHISPTGVLESISKVKRAEFW 185
              +GC GK+KKHLSKM+ GVTSF+ID  +K+VTV G I+P  VL  +SKVK A+FW
Sbjct:   180 CRGCQGKVKKHLSKMQVGVTSFNIDFASKKVTVTGDITPLEVLGCLSKVKNAQFW 234

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2094864 AT3G24450 "AT3G24450" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 34/64 (53%), Positives = 51/64 (79%)

Query:   122 QVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
             ++V ++VS+HC GCA K++KH+SK++GVT + ++LE+K+V V G+I P  VLESI KVK 
Sbjct:    74 KIVELKVSMHCYGCAKKVEKHISKLDGVTWYKVELESKKVVVKGNILPVDVLESICKVKN 133

Query:   182 AEFW 185
             A+ W
Sbjct:   134 AQLW 137

GO:0005507 "copper ion binding" evidence=ISS

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2205288 ATX1 "homolog of anti-oxidant 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 35/85 (41%), Positives = 57/85 (67%)

Query:   103 NPKSMPLIK-LPLASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRV 161
             N  S+ L + L +  S  + Q VV+RV++ C+GC G +K+ L KMEGV SF +D++ ++V
Sbjct:    13 NTASLSLFQALSVVESKAMSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKV 72

Query:   162 TVMGHISPTGVLESISKV-KRAEFW 185
             TV G++ P  VL++++K  K+  FW
Sbjct:    73 TVKGNVQPDAVLQTVTKTGKKTAFW 97

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0000785 "chromatin" evidence=IDA

TAIR|locus:2078461 CCH "copper chaperone" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 30/66 (45%), Positives = 46/66 (69%)

Query:   122 QVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKV-K 180
             Q VV++V + CQGC G + + L KMEGV SF ID++ ++VTV G++ P  V +++SK  K
Sbjct:     3 QTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKTGK 62

Query:   181 RAEFWP 186
             +  +WP
Sbjct:    63 KTSYWP 68

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0009507 "chloroplast" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0006598 "polyamine catabolic process" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009698 "phenylpropanoid metabolic process" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA

GO:0000302 "response to reactive oxygen species" evidence=IGI

GO:0006827 "high-affinity iron ion transport" evidence=IGI

GO:0006878 "cellular copper ion homeostasis" evidence=IMP;TAS

GO:0007568 "aging" evidence=IEP

GO:0016531 "copper chaperone activity" evidence=ISS

TAIR|locus:2180265 AT5G27690 [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 30/63 (47%), Positives = 48/63 (76%)

Query:   125 VMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AE 183
             V+RVS+HC+GC  K+KK LSK++GV + +ID++ ++VTV+G++ P  +++ I K  R AE
Sbjct:    33 VLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAE 92

Query:   184 FWP 186
              WP
Sbjct:    93 LWP 95

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:1005716648 AT2G18196 [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 33/94 (35%), Positives = 55/94 (58%)

Query:    98 PKPKPNPKSMPLIK----LPLASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFS 153
             P  KP  KS+  +     +P+A    + Q + ++V + C GC   +K  + K+ GV S  
Sbjct:    19 PHKKPKFKSVSHLNHYHTMPMARPLSL-QTIDLKVRMCCSGCERVVKHAIYKLRGVDSVE 77

Query:   154 IDLETKRVTVMGHISPTGVLESISKV-KRAEFWP 186
             ++LE +RVTV+G++    VL+++ +  KRAEFWP
Sbjct:    78 VNLEMERVTVVGYVERKKVLKAVRRAGKRAEFWP 111

GO:0005576 "extracellular region" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2133544 AT4G08570 "AT4G08570" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 31/80 (38%), Positives = 48/80 (60%)

Query:   109 LIKLPLASSDQVFQVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHI 167
             L+K       +  Q V +RV+ + C+GC  K+K  LS ++GV S  +D++ ++VTV G+I
Sbjct:    13 LLKKRKRKKKKQMQTVALRVARIDCEGCERKIKHVLSGVKGVKSVDVDVKLQKVTVTGYI 72

Query:   168 SPTGVLESI-SKVKRAEFWP 186
              P  VLE+  S  K+ E WP
Sbjct:    73 DPKKVLEAAKSTKKKVELWP 92

GO:0005575 "cellular_component" evidence=ND

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00031583001 SubName- Full=Chromosome chr12 scaffold_57, whole genome shotgun sequence; (206 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	187
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	3e-13
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	3e-12
COG2608	71	COG2608, CopZ, Copper chaperone [Inorganic ion tra	2e-06
PLN02957	238	PLN02957, PLN02957, copper, zinc superoxide dismut	2e-04
PRK10671	834	PRK10671, copA, copper exporting ATPase; Provision	4e-04

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 61.5 bits (150), Expect = 3e-13
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 6/61 (9%)

Query: 120 VFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG--HISPTGVLESIS 177
              V  M     C GC  K++K L K+ GV S  +DLET + TV     +SP  +LE+I 
Sbjct: 1   ELSVEGM----TCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIE 56

Query: 178 K 178
            
Sbjct: 57  D 57

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 58.8 bits (143), Expect = 3e-12
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 124 VVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRAE 183
            +    + C GCA K++K LSK+ GV+S S+DLET +VTV G   P  + +    +++A 
Sbjct: 1   TLRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKLEKLKKAIEKAG 60

Query: 184 F 184
           +
Sbjct: 61  Y 61

Length = 62

>gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 4/44 (9%)

Query: 120 VFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTV 163
             +V  M     C  C   ++K L +++GV S  +DLE    TV
Sbjct: 5   TLKVEGM----TCGHCVKTVEKALEEVDGVASVDVDLEKGTATV 44

Length = 71

>gnl|CDD|215516 PLN02957, PLN02957, copper, zinc superoxide dismutase

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query: 128 VSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
           V + C+GC   +K  L  +EGV +  +DL  + V V+G      +  ++ +  R
Sbjct: 12  VDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGR 65

Length = 238

>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 9/101 (8%)

Query: 86  RQAQDDIHSHHDPKPKP------NPKSMPLIK--LPLASSDQVFQVVVMRVSLHCQGCAG 137
           +QA  D    H PK KP        +++      LP A++D      ++   + C  C  
Sbjct: 57  KQAGYDASVSH-PKAKPLTESSIPSEALTAASEELPAATADDDDSQQLLLSGMSCASCVS 115

Query: 138 KLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISK 178
           +++  L  + GVT   ++L  +   VMG  SP  +++++ K
Sbjct: 116 RVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEK 156

Length = 834

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	187
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.35
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.24
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	98.96
KOG4656	247	consensus Copper chaperone for superoxide dismutas	98.7
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	98.62
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	98.45
PRK10671	834	copA copper exporting ATPase; Provisional	98.25
PRK10671	834	copA copper exporting ATPase; Provisional	98.22
PLN02957	238	copper, zinc superoxide dismutase	98.17
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	97.86
TIGR00003	68	copper ion binding protein. This model describes a	97.76
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	96.32
TIGR02052	92	MerP mercuric transport protein periplasmic compon	92.79
PRK13748	561	putative mercuric reductase; Provisional	82.32

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.35  E-value=4.4e-12  Score=86.00  Aligned_cols=57  Identities=44%  Similarity=0.673  Sum_probs=53.6

Q ss_pred             EEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC
Q 029814          125 VMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR  181 (187)
Q Consensus       125 ~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk  181 (187)
                      +|.| ||+|++|+.+|+++|.+++||.++.+|+.+++++|.++   +++++|.++|+++||
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy   61 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGY   61 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTS
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCc
Confidence            5899 99999999999999999999999999999999999965   467999999999997

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.24  E-value=5.8e-11  Score=84.18  Aligned_cols=63  Identities=25%  Similarity=0.486  Sum_probs=56.3

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEE--e-cCCHHHHHHHHHhCCC-eEe
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM--G-HISPTGVLESISKVKR-AEF  184 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~--g-~v~~eeIveaIekaGk-AeL  184 (187)
                      .+.+|+| ||+|++|+..|+++|.+++||.++++|+..+.+.|.  + ..+.++|.++|+++|| ++.
T Consensus         2 ~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~~aGy~~~~   69 (71)
T COG2608           2 MKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAGYKVEE   69 (71)
T ss_pred             ceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHHHcCCCeee
Confidence            4678999 999999999999999999999999999999777776  3 4799999999999998 443

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=98.96  E-value=4.7e-09  Score=74.59  Aligned_cols=65  Identities=42%  Similarity=0.889  Sum_probs=59.9

Q ss_pred             eeEEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCC-C-eEec
Q 029814          121 FQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVK-R-AEFW  185 (187)
Q Consensus       121 ~~tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaG-k-AeL~  185 (187)
                      ++...+.++|+|.+|..+|++.|..++||.++.+|..+++++|.+.+++..|++.|.+.| + +++|
T Consensus         4 ~~~~v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~~~p~~vl~~l~k~~~k~~~~~   70 (73)
T KOG1603|consen    4 IKTVVLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGNVDPVKLLKKLKKTGGKRAELW   70 (73)
T ss_pred             ccEEEEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEecCHHHHHHHHHhcCCCceEEe
Confidence            456778889999999999999999999999999999999999999999999999999987 5 6665

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=98.70  E-value=5.3e-08  Score=82.92  Aligned_cols=64  Identities=23%  Similarity=0.472  Sum_probs=59.9

Q ss_pred             eEEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEec
Q 029814          122 QVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       122 ~tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~  185 (187)
                      -+.+|.|.|+|.+|++.|+..|..++||.++++|+.++.+.|.+...+.+|++.|+..|+ |.|.
T Consensus         7 ~~~efaV~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p~s~i~~~le~tGr~Avl~   71 (247)
T KOG4656|consen    7 YEAEFAVQMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVPPSEIQNTLENTGRDAVLR   71 (247)
T ss_pred             eeEEEEEechhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCChHHHHHHHHhhChheEEe
Confidence            457899999999999999999999999999999999999999999999999999999996 7663

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.62  E-value=3.4e-08  Score=97.74  Aligned_cols=133  Identities=20%  Similarity=0.339  Sum_probs=100.9

Q ss_pred             cccceeccccceeeeccCCCCCeeEeecCCCCCCCCcccCCCCcccccceeeeehhhccCCCCCCCcccCCcccccCchh
Q 029814            4 RGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLIKYSKLIDNSHHPPSSNYKRSLHFVPSTSS   83 (187)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s   83 (187)
                      .||+|++|       +     .|++..+++.| |.-...+.  +-..++=|-|. ...+..      -.+        ..
T Consensus         1 ~gmtc~ac-------~-----~si~~~~~~~~-g~~~i~vs--l~~~~~~v~~~-~~~~~~------~i~--------~~   50 (951)
T KOG0207|consen    1 KGMTCSAC-------S-----NSIEKAISRKP-GVQKIEVS--LAQKRANVSYD-NIVSPE------SIK--------ET   50 (951)
T ss_pred             CCccHHHH-------h-----hhHHHHHhcCC-CceeEEEE--eccccceEEEe-eccCHH------HHH--------HH
Confidence            39999999       7     89999999866 76666666  55555557776 333222      111        22


Q ss_pred             hccccccCCCccCCCCCCCCCCCCccccCCCCCCCCceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEE
Q 029814           84 IKRQAQDDIHSHHDPKPKPNPKSMPLIKLPLASSDQVFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVT  162 (187)
Q Consensus        84 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVt  162 (187)
                      |+.++|+....+....                    ...+..|++ ||+|.+|+..|++.|+.++|+.++.+.+...+..
T Consensus        51 ied~gf~~~~~~~~~~--------------------~~~~~~l~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~  110 (951)
T KOG0207|consen   51 IEDMGFEASLLSDSEI--------------------TASKCYLSVNGMTCASCVATIERNLRKIEGVESAVVALSASKAE  110 (951)
T ss_pred             hhcccceeeecccCcc--------------------ccceeEEEecCceeHHHHHHHHHHhhccCCcceEEEEeecccee
Confidence            7778777766553111                    111668999 9999999999999999999999999999999999


Q ss_pred             EEec---CCHHHHHHHHHhCCC-eEecc
Q 029814          163 VMGH---ISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       163 V~g~---v~~eeIveaIekaGk-AeL~s  186 (187)
                      +.++   .+++.+.+.|++.|+ +++++
T Consensus       111 v~~dp~v~s~~~~~e~ie~~gf~a~~i~  138 (951)
T KOG0207|consen  111 VIYDPAVTSPDSIAESIEDLGFSAELIE  138 (951)
T ss_pred             EEECCcccCchhHHHHHHhcCccceehh
Confidence            9854   789999999999998 87764

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.45  E-value=2.1e-07  Score=92.29  Aligned_cols=60  Identities=27%  Similarity=0.557  Sum_probs=56.0

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR  181 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk  181 (187)
                      +++.|.| ||.|.+|..+|++.|.+++||.++++++.++++.|.++   ..+.++++.|+..|+
T Consensus       146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie~~~~  209 (951)
T KOG0207|consen  146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIEETGF  209 (951)
T ss_pred             CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHHhhcc
Confidence            6789999 99999999999999999999999999999999999853   689999999999986

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.25  E-value=2.4e-06  Score=84.25  Aligned_cols=62  Identities=24%  Similarity=0.507  Sum_probs=54.4

Q ss_pred             EEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEe
Q 029814          123 VVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEF  184 (187)
Q Consensus       123 tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL  184 (187)
                      ++.+.+ ||+|.+|...+++.+.+++||..+.+++..++..+.+..+...+.+.+++.|| +.+
T Consensus       100 ~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~~s~~~I~~~I~~~Gy~a~~  163 (834)
T PRK10671        100 SQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEA  163 (834)
T ss_pred             eEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEccCCHHHHHHHHHhcCCCccc
Confidence            567889 99999999999999999999999999999999888755677888888898887 544

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.22  E-value=3.6e-06  Score=83.04  Aligned_cols=63  Identities=21%  Similarity=0.382  Sum_probs=55.2

Q ss_pred             eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEec
Q 029814          121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~  185 (187)
                      +++++|.| ||+|++|+.+|+++|++++||..+++++.  +.++.+..+.+.+.+.|++.|| +++.
T Consensus         2 ~~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~~~~~~i~~~i~~~Gy~~~~~   66 (834)
T PRK10671          2 SQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGTASAEALIETIKQAGYDASVS   66 (834)
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEecCCHHHHHHHHHhcCCccccc
Confidence            35789999 99999999999999999999999999994  5566666789999999999998 6653

>PLN02957 copper, zinc superoxide dismutase

Probab=98.17  E-value=1.3e-05  Score=68.78  Aligned_cols=65  Identities=25%  Similarity=0.522  Sum_probs=58.5

Q ss_pred             eEEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEecc
Q 029814          122 QVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       122 ~tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~s  186 (187)
                      .++.|.++|+|.+|+.+|++.|++++||..+.+++..+++.|.+......+.+.|++.|| +++++
T Consensus         6 ~~~~~~VgMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~   71 (238)
T PLN02957          6 LLTEFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRKARLIG   71 (238)
T ss_pred             EEEEEEECccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecCCHHHHHHHHHHcCCcEEEec
Confidence            456678899999999999999999999999999999999999877788899999999998 77754

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.86  E-value=3.9e-05  Score=75.29  Aligned_cols=59  Identities=25%  Similarity=0.570  Sum_probs=53.4

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CC-HHHHHHHHHhCCC
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---IS-PTGVLESISKVKR  181 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~-~eeIveaIekaGk  181 (187)
                      .+.+|.| ||+|.+|+.+|| +|++++||..+.+|+.++++.|..+   .+ .+++...+++.||
T Consensus         2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~~~gy   65 (713)
T COG2217           2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAGY   65 (713)
T ss_pred             ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHHhcCc
Confidence            3568999 999999999999 9999999999999999999999853   34 7899999999997

>TIGR00003 copper ion binding protein

Probab=97.76  E-value=0.00034  Score=43.07  Aligned_cols=60  Identities=28%  Similarity=0.464  Sum_probs=50.5

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR  181 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk  181 (187)
                      .+..+.| |++|..|...+++.++..+++....+++....+.+...   .....+...+...|+
T Consensus         2 ~~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   65 (68)
T TIGR00003         2 QKFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAILDAGY   65 (68)
T ss_pred             cEEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHHHcCC
Confidence            3467999 99999999999999999999999999999999888742   466777777777775

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=96.32  E-value=0.015  Score=57.33  Aligned_cols=61  Identities=18%  Similarity=0.302  Sum_probs=50.9

Q ss_pred             eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec-CCHHHHHHHHHhCCC
Q 029814          121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH-ISPTGVLESISKVKR  181 (187)
Q Consensus       121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~-v~~eeIveaIekaGk  181 (187)
                      ..+..+.+ ||+|.+|..++++.+.+++||..+.+++.++++.+..+ ...+++.+.+++.||
T Consensus        52 ~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~~~I~~aI~~~Gy  114 (741)
T PRK11033         52 GTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQKAGF  114 (741)
T ss_pred             CceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccchHHHHHHHHhccc
Confidence            34567889 99999999999999999999999999999999888643 122667778888887

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=92.79  E-value=2  Score=28.93  Aligned_cols=62  Identities=19%  Similarity=0.370  Sum_probs=46.4

Q ss_pred             EEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEe---cCCHHHHHHHHHhCCC-eEe
Q 029814          123 VVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG---HISPTGVLESISKVKR-AEF  184 (187)
Q Consensus       123 tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g---~v~~eeIveaIekaGk-AeL  184 (187)
                      +..+.+ ++.|..|...++..+...+|+....++.......+..   ......+...+...|+ +++
T Consensus        24 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   90 (92)
T TIGR02052        24 TVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTDAGYPSSL   90 (92)
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            456778 9999999999999999999988888888877766552   2355555566666775 443

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

>PRK13748 putative mercuric reductase; Provisional

Probab=82.32  E-value=7.6  Score=36.38  Aligned_cols=60  Identities=20%  Similarity=0.433  Sum_probs=46.2

Q ss_pred             EEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEe--cCCHHHHHHHHHhCCC-eEe
Q 029814          125 VMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG--HISPTGVLESISKVKR-AEF  184 (187)
Q Consensus       125 ~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g--~v~~eeIveaIekaGk-AeL  184 (187)
                      .+.+ +|+|.+|..+++..+...+++....+++..+...+..  ......+...+...|+ .++
T Consensus         3 ~i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~~~~~~i~~~i~~~g~~~~~   66 (561)
T PRK13748          3 TLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVGTSPDALTAAVAGLGYRATL   66 (561)
T ss_pred             EEEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCeeec
Confidence            4668 9999999999999999999988889999888876663  2355566666666775 443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	187
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	1e-18
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	3e-16
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	4e-15
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	9e-15
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	1e-13
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	4e-09
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	3e-08
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	7e-07
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	1e-07
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	1e-07
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	6e-07
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	7e-07
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	8e-07
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	1e-06
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	8e-07
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	3e-06
2kkh_A	95	Putative heavy metal transporter; zinc transport,	1e-06
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	2e-06
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	2e-06
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	2e-06
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	3e-06
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	3e-06
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	3e-06
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	3e-06
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	4e-06
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	5e-06
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	5e-06
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	2e-05
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	3e-05
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	3e-05
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	3e-05
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	4e-05
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	4e-05
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	5e-05
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	1e-04
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	2e-04
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	4e-04
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	5e-04
2kyz_A	67	Heavy metal binding protein; structural genomics,	8e-04

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 75.6 bits (186), Expect = 1e-18
 Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 1/74 (1%)

Query: 113 PLASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGV 172
             + +      +   V + CQ C   ++K L  + GV    + LE + V V   +    V
Sbjct: 10  SDSGNQGTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEV 69

Query: 173 LESISKV-KRAEFW 185
              +    ++A   
Sbjct: 70  QALLEGTGRQAVLK 83

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 68.6 bits (168), Expect = 3e-16
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 124 VVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKV-KRA 182
               V + C GCA  + + L+K+ GV  + IDL  K+V +    S   +L ++ K  K  
Sbjct: 4   HEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTV 62

Query: 183 EFW 185
            + 
Sbjct: 63  SYL 65

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222

 Score = 69.7 bits (170), Expect = 4e-15
 Identities = 11/66 (16%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 116 SSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLES 175
           +++  ++     + +HC+ C   +K  L  + G+ S + D+E + ++V   ++P+ ++ +
Sbjct: 1   TTNDTYEATYA-IPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINT 59

Query: 176 ISKVKR 181
           +    +
Sbjct: 60  LRNCGK 65

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 65.2 bits (159), Expect = 9e-15
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 122 QVVVMRVSLHCQGCAGKLKKHLSKME-GVTSFSIDLETKRVTVMGHISPTGVLESISK 178
           +     V + C GC+G + K L+K+E  V+   I LE + V V   +    +LE I K
Sbjct: 5   KHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKK 62

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249

 Score = 66.3 bits (161), Expect = 1e-13
 Identities = 11/63 (17%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 116 SSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLES 175
           +++  ++     + +HC+ C   +K  L  + G+ S + D+E + ++V   ++P+ ++ +
Sbjct: 2   TTNDTYEATYA-IPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINT 60

Query: 176 ISK 178
           +  
Sbjct: 61  LRN 63

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85

 Score = 50.6 bits (121), Expect = 4e-09
 Identities = 19/86 (22%), Positives = 28/86 (32%), Gaps = 12/86 (13%)

Query: 93  HSHHDPKPKPNPKSMPLIKLPLASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSF 152
           H HH    + N             +   F V  M     C  CAG +K  + K     + 
Sbjct: 6   HHHHHSSGRENLYF--------QGAGLSFHVEDM----TCGHCAGVIKGAIEKTVPGAAV 53

Query: 153 SIDLETKRVTVMGHISPTGVLESISK 178
             D  ++ V V G      + E I+ 
Sbjct: 54  HADPASRTVVVGGVSDAAHIAEIITA 79

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 50.4 bits (120), Expect = 3e-08
 Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 113 PLASSDQVFQVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHIS 168
            L         + +R+  +HC+ C   +++++ ++ GV S  + LE K   V       S
Sbjct: 11  TLGHQGSHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTS 70

Query: 169 PTGVLESISKVKRAEF 184
           P  +  +I  +    F
Sbjct: 71  PVALQRAIEALPPGNF 86

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 46.5 bits (110), Expect = 7e-07
 Identities = 16/101 (15%), Positives = 29/101 (28%), Gaps = 8/101 (7%)

Query: 86  RQAQDDIHSHHDPKPKPNPKSMPLIKLPLASSDQVFQVVVMRVSL-----HCQGCAGKLK 140
                 +      +             P +      Q       +      C  C   ++
Sbjct: 82  PPGNFKVSLPDGAEGSGTDHRSSSSHSPGSPPRNQVQGTCSTTLIAIAGMTCASCVHSIE 141

Query: 141 KHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLESISK 178
             +S++EGV   S+ L     TV+     ISP  +  +I  
Sbjct: 142 GMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIED 182

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64

 Score = 46.2 bits (110), Expect = 1e-07
 Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 126 MRVSLH-----CQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISK 178
           M + L      C+ CA  + K +   +   +  +DL +K+VT+   +    +  +I+ 
Sbjct: 1   MTIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIAS 58

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66

 Score = 45.7 bits (109), Expect = 1e-07
 Identities = 12/48 (25%), Positives = 21/48 (43%)

Query: 131 HCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISK 178
            C  C   + K L K+ GV    + LE     V G   P  +++++ +
Sbjct: 10  TCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEE 57

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 5/43 (11%)

Query: 126 MRVSLH-----CQGCAGKLKKHLSKMEGVTSFSIDLETKRVTV 163
           M+ +       C  C  K++K + ++EGV+   + +E K V V
Sbjct: 1   MKATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVV 43

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Length = 90

 Score = 44.8 bits (106), Expect = 7e-07
 Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 131 HCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLESISKV 179
           HC+ C   ++  LS ++ V+S  + LE +   V+     ++P  + ++I  V
Sbjct: 13  HCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAV 64

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 45.8 bits (109), Expect = 8e-07
 Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 4/70 (5%)

Query: 113 PLASSDQVFQVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHIS 168
            +         + + ++ + C  C   ++  L++  G+T  S+ L T +  V      I 
Sbjct: 71  VMEDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIG 130

Query: 169 PTGVLESISK 178
           P  +++ I +
Sbjct: 131 PRDIIKIIEE 140

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 3/52 (5%)

Query: 131 HCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLESISKV 179
            C  C   ++++L K  GV S  + L   +  +      I P  + + I  +
Sbjct: 14  TCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDL 65

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 45.9 bits (109), Expect = 8e-07
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 8/66 (12%)

Query: 121 FQVVVMRVSL-----HCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGV 172
           + VV  +         C  CA +++K L+K+EGV +  ++   + VTV       S + +
Sbjct: 69  YHVVTEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDL 128

Query: 173 LESISK 178
            E++ K
Sbjct: 129 KEAVDK 134

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)

Query: 122 QVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLESIS 177
           + + M+VS + C  CA +++K L +M GVT  +++L T+ V V+          + E I 
Sbjct: 6   KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE 65

Query: 178 KV 179
           K+
Sbjct: 66  KL 67

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95

 Score = 43.6 bits (103), Expect = 1e-06
 Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 115 ASSDQVFQVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPT 170
               +  Q     V  + C      ++  L  ++GV  +S+ + ++ V V+     ISP 
Sbjct: 9   KKKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPF 68

Query: 171 GVLESISK 178
            + +++++
Sbjct: 69  QIAKALNE 76

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Length = 84

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 4/62 (6%)

Query: 122 QVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLESIS 177
            V+ M+V  + C  C   ++  + K++GV    + L+ +  T++     IS   + + I 
Sbjct: 9   VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE 68

Query: 178 KV 179
            +
Sbjct: 69  AM 70

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75

 Score = 42.7 bits (101), Expect = 2e-06
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 122 QVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLESIS 177
             V + V  + C  C   +++ + K+ GV    + LE K  T++      +P  + E+I 
Sbjct: 2   NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID 61

Query: 178 K 178
            
Sbjct: 62  D 62

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69

 Score = 42.7 bits (101), Expect = 2e-06
 Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 7/62 (11%)

Query: 120 VFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLESI 176
             QV  M     CQ C   ++  + +++GV++  ++LE  +V V      +S   + ++I
Sbjct: 5   TLQVEGM----SCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAI 60

Query: 177 SK 178
             
Sbjct: 61  ED 62

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71

 Score = 42.3 bits (100), Expect = 3e-06
 Identities = 9/61 (14%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 122 QVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLESIS 177
           + + ++V  + C  C   ++  + ++ GV    + L    V V      ++   ++  I 
Sbjct: 5   EQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIE 64

Query: 178 K 178
            
Sbjct: 65  D 65

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71

 Score = 42.4 bits (100), Expect = 3e-06
 Identities = 12/36 (33%), Positives = 22/36 (61%)

Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG 165
           L C  CA K ++++ ++EGVT   ++    ++TV G
Sbjct: 12  LSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTG 47

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72

 Score = 42.3 bits (100), Expect = 3e-06
 Identities = 15/52 (28%), Positives = 24/52 (46%)

Query: 131 HCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRA 182
            C  C   +KK +SK+EGV+   +  ET++  V    + T V +       A
Sbjct: 13  TCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADA 64

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72

 Score = 42.3 bits (100), Expect = 3e-06
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 122 QVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLESIS 177
           Q  V+ +  + C  C   ++  +SK  GV S  + L     TV       SP  +  +I 
Sbjct: 3   QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62

Query: 178 K 178
            
Sbjct: 63  D 63

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} Length = 74

 Score = 41.9 bits (99), Expect = 4e-06
 Identities = 10/52 (19%), Positives = 21/52 (40%)

Query: 131 HCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRA 182
            C  C+  ++  L  + GV   S+ L   R  V+   +     +   +++ A
Sbjct: 12  TCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDA 63

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79

 Score = 42.0 bits (99), Expect = 5e-06
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 131 HCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLESISK 178
            C  C   +++ + K+ GV    + LE K  T++      +P  + E+I  
Sbjct: 18  TCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDD 68

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Length = 68

 Score = 41.5 bits (98), Expect = 5e-06
 Identities = 8/51 (15%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 131 HCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLESISK 178
            C  C  ++++ + ++ GV    + L+ ++  V     ++  T + ++I++
Sbjct: 10  SCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINE 60

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Length = 77

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 131 HCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLESISK 178
            C  C   ++++L + EG+ S  + L   +  V      I P  + E I +
Sbjct: 13  TCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRE 63

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Length = 72

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 2/49 (4%)

Query: 132 CQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM--GHISPTGVLESISK 178
           C  C   +   L  ++GVT   I L T    V     ++   + E I  
Sbjct: 13  CSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIED 61

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71

 Score = 39.6 bits (93), Expect = 3e-05
 Identities = 10/50 (20%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 131 HCQGCAGKLKKHLSKMEGVTSFSIDLETKR--VTVMGHISPTGVLESISK 178
            C  CA  +++ ++K+ GV S  ++   ++  V+  G  +P  + +++ +
Sbjct: 13  RCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVER 62

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Length = 75

 Score = 39.6 bits (93), Expect = 3e-05
 Identities = 11/52 (21%), Positives = 21/52 (40%)

Query: 131 HCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRA 182
            C  C  K++  L+K  G+   S+ L T +  +       G  + I  ++  
Sbjct: 14  TCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESL 65

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Length = 73

 Score = 39.3 bits (92), Expect = 4e-05
 Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 115 ASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLE 174
           + +   ++V  M     C  CA K++  + ++ GV    +   T+++ V          +
Sbjct: 1   SGTRYSWKVSGM----DCAACARKVENAVRQLAGVNQVQVLFATEKLVV--DADNDIRAQ 54

Query: 175 SISKVKRA 182
             S +++A
Sbjct: 55  VESALQKA 62

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Length = 71

 Score = 39.2 bits (92), Expect = 4e-05
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 131 HCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLESISK 178
            C  CA  +++ L +++GV   S+ + T R+TV      +S   + E I+ 
Sbjct: 13  RCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAA 63

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Length = 69

 Score = 38.8 bits (91), Expect = 5e-05
 Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 132 CQGCAGKLKKHLSKMEGVTSFSIDLETKR--VTVMGHISPTGVLESISK 178
           C  CA  +K+ L K+ GV S  +        + ++   SP  +  +++ 
Sbjct: 11  CDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAG 59

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Length = 76

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 16/52 (30%), Positives = 29/52 (55%)

Query: 131 HCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRA 182
            C  CA +++K L +M GVT  +++L T+ V V+   + TG      K+++ 
Sbjct: 16  TCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKL 67

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Length = 73

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 122 QVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTV 163
           + +V+ +S L C  C  ++KK L +  G     +DL    V  
Sbjct: 5   EKIVLELSGLSCHHCVARVKKALEEA-GAKVEKVDLNEAVVAG 46

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Length = 80

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 14/52 (26%), Positives = 26/52 (50%)

Query: 131 HCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRA 182
            C  CA +++K L+K+EGV +  ++   + VTV  +     V +    V + 
Sbjct: 13  TCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKL 64

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723

 Score = 39.0 bits (92), Expect = 5e-04
 Identities = 7/52 (13%), Positives = 17/52 (32%)

Query: 131 HCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRA 182
            C  C   ++  +  +EGV    ++L T+   +               ++  
Sbjct: 12  TCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDL 63

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Length = 67

 Score = 35.5 bits (82), Expect = 8e-04
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 7/58 (12%)

Query: 126 MRVSLH-----CQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISK 178
           MR  L+     C  C  ++ K L ++ GV ++ + +E K+V V    +   VL+ + +
Sbjct: 1   MRYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETE-NLDSVLKKLEE 56

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	187
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	99.53
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.42
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	99.41
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.41
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	99.34
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	99.22
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	99.2
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	99.2
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	99.18
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	99.18
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	99.18
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	99.18
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	99.16
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	99.15
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	99.15
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	99.15
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	99.12
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	99.12
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	99.12
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	99.12
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	99.12
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	99.11
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	99.11
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	99.09
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	99.07
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	99.06
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	99.06
2kyz_A	67	Heavy metal binding protein; structural genomics,	99.06
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	99.03
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	99.01
2kkh_A	95	Putative heavy metal transporter; zinc transport,	98.98
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.96
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	98.94
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	98.88
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.86
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.83
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	98.82
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	98.67
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.52
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.47
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.3

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=99.53  E-value=4.7e-14  Score=95.21  Aligned_cols=66  Identities=26%  Similarity=0.497  Sum_probs=61.3

Q ss_pred             eeEEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEeccC
Q 029814          121 FQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFWPC  187 (187)
Q Consensus       121 ~~tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~s~  187 (187)
                      |.+.+|.|||+|.+|+.+|+++|++++|| ++++|+.+++++|.+..++++|.++|++.|| +++|++
T Consensus         1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~   67 (68)
T 3iwl_A            1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL   67 (68)
T ss_dssp             -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred             CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence            35678888999999999999999999999 9999999999999998999999999999998 999874

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.42  E-value=7.3e-13  Score=89.51  Aligned_cols=66  Identities=21%  Similarity=0.379  Sum_probs=60.8

Q ss_pred             eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814          121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s  186 (187)
                      |++++|.| ||+|.+|+.+|+++|++++||..+.+|+.+++++|..+   ++.++|.++|++.|| +++++
T Consensus         1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (74)
T 3dxs_X            1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA   71 (74)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred             CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence            56789999 99999999999999999999999999999999999853   689999999999998 88764

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=99.41  E-value=8.7e-13  Score=89.85  Aligned_cols=66  Identities=18%  Similarity=0.358  Sum_probs=61.6

Q ss_pred             CceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEecc
Q 029814          119 QVFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       119 ~~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~s  186 (187)
                      ..|.+++|.| ||+|.+|+.+|+++|++ +||..+.+|+.+++++|.++ +.+.|.++|++.|| +++++
T Consensus         2 ~~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~   69 (73)
T 3fry_A            2 DSVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRS   69 (73)
T ss_dssp             CCCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECC
T ss_pred             CccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecC
Confidence            3577889999 99999999999999999 99999999999999999988 99999999999999 88865

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.41  E-value=1.6e-12  Score=86.57  Aligned_cols=64  Identities=19%  Similarity=0.505  Sum_probs=59.4

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEE--ecCCHHHHHHHHHhCCC-eEec
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM--GHISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~--g~v~~eeIveaIekaGk-AeL~  185 (187)
                      ++++|.| ||+|.+|+.+|+++|++++||..+.+|+.+++++|.  ...+.++|.++|++.|| ++++
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~   69 (69)
T 4a4j_A            2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL   69 (69)
T ss_dssp             EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred             CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence            4678999 999999999999999999999999999999999998  45789999999999998 8775

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=99.34  E-value=6.3e-12  Score=85.01  Aligned_cols=66  Identities=29%  Similarity=0.464  Sum_probs=61.6

Q ss_pred             eeEEEEEecccchhHHHHHHHHhhccC-CceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEecc
Q 029814          121 FQVVVMRVSLHCQGCAGKLKKHLSKME-GVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       121 ~~tv~f~VGM~C~sCa~kIekaL~~l~-GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~s  186 (187)
                      +.+++|.|+|+|.+|+.+|+++|++++ ||.++++|+.+++++|.+..+.++|.+.|++.|| +++|+
T Consensus         4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~   71 (73)
T 1cc8_A            4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK   71 (73)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred             ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence            566788999999999999999999999 9999999999999999988899999999999998 88875

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=99.22  E-value=3.3e-11  Score=77.18  Aligned_cols=58  Identities=19%  Similarity=0.452  Sum_probs=55.1

Q ss_pred             EEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC
Q 029814          124 VVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR  181 (187)
Q Consensus       124 v~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk  181 (187)
                      .+|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|.+..+.+.|.+.|++.||
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~   61 (64)
T 2xmm_A            3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGY   61 (64)
T ss_dssp             EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTC
T ss_pred             EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCC
Confidence            57999 99999999999999999999999999999999999977889999999999997

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=99.20  E-value=3.1e-11  Score=79.16  Aligned_cols=61  Identities=25%  Similarity=0.482  Sum_probs=56.0

Q ss_pred             EEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEec
Q 029814          125 VMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       125 ~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~  185 (187)
                      +|.| ||+|.+|..+|+++|.+++||.++.+|+..++++|.+..+.+.|.+.|++.|| ++.+
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~   65 (66)
T 2roe_A            3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL   65 (66)
T ss_dssp             CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence            5899 99999999999999999999999999999999999655789999999999998 6554

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=99.20  E-value=1.5e-10  Score=75.91  Aligned_cols=62  Identities=15%  Similarity=0.385  Sum_probs=56.7

Q ss_pred             ceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC
Q 029814          120 VFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR  181 (187)
Q Consensus       120 ~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk  181 (187)
                      .|.+.+|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+   .+.+.|.+.|++.||
T Consensus         3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~   68 (71)
T 2l3m_A            3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGY   68 (71)
T ss_dssp             SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTC
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCC
Confidence            466788999 99999999999999999999999999999999999743   678899999999998

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=99.18  E-value=1.3e-10  Score=76.23  Aligned_cols=64  Identities=25%  Similarity=0.381  Sum_probs=57.7

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEec
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~  185 (187)
                      ++.+|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|.++   .+.+.|.+.|++.|| +++.
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (72)
T 1aw0_A            3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred             eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence            3568999 99999999999999999999999999999999999853   578899999999998 7665

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=99.18  E-value=1.6e-10  Score=75.41  Aligned_cols=64  Identities=19%  Similarity=0.480  Sum_probs=56.8

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhCCC-eEec
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH--ISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~--v~~eeIveaIekaGk-AeL~  185 (187)
                      ++.+|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+  .+.+.|.+.|++.|| +.++
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~   70 (71)
T 2xmw_A            3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL   70 (71)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEEE
T ss_pred             cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCceeC
Confidence            5678999 99999999999999999999999999999999999853  678889999999998 6543

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=99.18  E-value=1.8e-10  Score=75.47  Aligned_cols=64  Identities=25%  Similarity=0.411  Sum_probs=57.6

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEec
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~  185 (187)
                      .++.|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|.++   .+.+.|.+.|++.|| +++.
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (72)
T 1osd_A            3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence            4678999 99999999999999999999999999999999999743   578899999999998 6654

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.18  E-value=1.3e-10  Score=84.45  Aligned_cols=66  Identities=23%  Similarity=0.378  Sum_probs=60.9

Q ss_pred             eeEEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEecc
Q 029814          121 FQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       121 ~~tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~s  186 (187)
                      +.+++|.|.|+|.+|+.+|+++|.+++||..+.+|+.+++++|.+..+.+.|.++|++.|| +++|.
T Consensus        18 ~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~   84 (98)
T 2crl_A           18 LCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKG   84 (98)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEE
T ss_pred             ceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEcc
Confidence            4566788899999999999999999999999999999999999988899999999999998 88764

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=99.16  E-value=1.7e-10  Score=77.75  Aligned_cols=67  Identities=22%  Similarity=0.436  Sum_probs=59.9

Q ss_pred             ceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814          120 VFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       120 ~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s  186 (187)
                      ...+++|.| ||+|.+|+.+|+++|.+++||..+.+|+..+++.|..+   .+.+.|.+.|++.|| +++.+
T Consensus         6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   77 (79)
T 1kvi_A            6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   77 (79)
T ss_dssp             TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence            356678999 99999999999999999999999999999999999853   578899999999998 77765

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=99.15  E-value=3.2e-10  Score=75.41  Aligned_cols=64  Identities=23%  Similarity=0.469  Sum_probs=57.5

Q ss_pred             EEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814          123 VVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       123 tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s  186 (187)
                      +++|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+   .+.+.|.+.|++.|| +++++
T Consensus         3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (75)
T 3cjk_B            3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   71 (75)
T ss_dssp             EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred             EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence            467999 99999999999999999999999999999999999853   578899999999998 76653

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=99.15  E-value=2.1e-10  Score=74.15  Aligned_cols=61  Identities=18%  Similarity=0.457  Sum_probs=55.7

Q ss_pred             EEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEec
Q 029814          125 VMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       125 ~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~  185 (187)
                      +|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+   .+.+.|.+.|++.|| ++++
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   68 (68)
T 1cpz_A            3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred             EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcccC
Confidence            5899 99999999999999999999999999999999999853   578899999999998 7664

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=99.15  E-value=2.9e-10  Score=75.62  Aligned_cols=64  Identities=17%  Similarity=0.272  Sum_probs=56.7

Q ss_pred             eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecC-CHHHHHHHHHhCCC-eEe
Q 029814          121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHI-SPTGVLESISKVKR-AEF  184 (187)
Q Consensus       121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v-~~eeIveaIekaGk-AeL  184 (187)
                      |.+++|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|.++. ..+.|.+.|++.|| +..
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~   68 (73)
T 1mwy_A            2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRD   68 (73)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEE
T ss_pred             CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCcccc
Confidence            56788999 999999999999999999999999999999999998542 36788999999998 543

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=99.12  E-value=2.3e-10  Score=74.83  Aligned_cols=62  Identities=19%  Similarity=0.372  Sum_probs=55.9

Q ss_pred             EEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhCCC-eEecc
Q 029814          125 VMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH--ISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       125 ~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~--v~~eeIveaIekaGk-AeL~s  186 (187)
                      +|.| ||+|.+|..+|+++|.+++||..+.+|+..+++.|..+  .+.++|.+.|++.|| +.+.+
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~~   68 (69)
T 2kt2_A            3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLAD   68 (69)
T ss_dssp             CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECCC
T ss_pred             EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeCC
Confidence            5899 99999999999999999999999999999999999743  578899999999998 76653

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=99.12  E-value=1.3e-10  Score=78.10  Aligned_cols=66  Identities=21%  Similarity=0.375  Sum_probs=59.3

Q ss_pred             eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814          121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s  186 (187)
                      |.+.+|.| ||+|.+|..+|+++|.+++||..+.+|+..+++.|..+   .+.+.|.+.|++.|| +.++.
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   72 (77)
T 1y3j_A            2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE   72 (77)
T ss_dssp             CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred             CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence            66788999 99999999999999999999999999999999999853   578899999999998 76654

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=99.12  E-value=1.7e-10  Score=81.70  Aligned_cols=63  Identities=21%  Similarity=0.249  Sum_probs=57.1

Q ss_pred             CceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC
Q 029814          119 QVFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR  181 (187)
Q Consensus       119 ~~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk  181 (187)
                      ..+.+.+|.| ||+|.+|+.+|+++|.+++||..+.+|+.+++++|.+..+.+.|.++|+++||
T Consensus        19 ~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy   82 (85)
T 2k2p_A           19 FQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGY   82 (85)
T ss_dssp             ---CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTC
T ss_pred             ccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCC
Confidence            3445678999 99999999999999999999999999999999999987889999999999998

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=99.12  E-value=3.2e-10  Score=80.19  Aligned_cols=66  Identities=20%  Similarity=0.425  Sum_probs=58.7

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhC---CC-eEeccC
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKV---KR-AEFWPC  187 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIeka---Gk-AeL~s~  187 (187)
                      .+++|.| ||+|.+|+.+|+++|.+++||..+++|+.++++.|..+   ++.+.|.++|++.   || +.++++
T Consensus         3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~   76 (90)
T 2g9o_A            3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSE   76 (90)
T ss_dssp             EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCC
T ss_pred             cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCC
Confidence            3568999 99999999999999999999999999999999999843   5788999999999   58 887753

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=99.12  E-value=5.6e-10  Score=71.33  Aligned_cols=61  Identities=20%  Similarity=0.457  Sum_probs=55.3

Q ss_pred             eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC
Q 029814          121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR  181 (187)
Q Consensus       121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk  181 (187)
                      |.+.+|.| ||+|.+|..+|++.|..++||..+.+|+..+++.|..+   .+.+.|.+.|++.||
T Consensus         1 m~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~   65 (69)
T 2qif_A            1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGY   65 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTC
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCC
Confidence            34568999 99999999999999999999999999999999999743   578899999999998

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=99.11  E-value=3e-10  Score=74.45  Aligned_cols=64  Identities=23%  Similarity=0.439  Sum_probs=57.7

Q ss_pred             EEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhCCC-eEecc
Q 029814          123 VVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH--ISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       123 tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~--v~~eeIveaIekaGk-AeL~s  186 (187)
                      ++.|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+  .+.+.|.+.|++.|| +++++
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~   70 (72)
T 1fvq_A            3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence            467999 99999999999999999999999999999999999853  578899999999998 77764

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=99.11  E-value=4.4e-10  Score=73.94  Aligned_cols=66  Identities=27%  Similarity=0.474  Sum_probs=58.7

Q ss_pred             ceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEe---cCCHHHHHHHHHhCCC-eEec
Q 029814          120 VFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG---HISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       120 ~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g---~v~~eeIveaIekaGk-AeL~  185 (187)
                      .+.+..|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..   ..+.+.|.+.|++.|| ++++
T Consensus         4 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   74 (76)
T 1opz_A            4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE   74 (76)
T ss_dssp             CCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred             cceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence            356778999 9999999999999999999999999999999999974   2578899999999998 6654

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=99.09  E-value=4.6e-10  Score=77.45  Aligned_cols=66  Identities=21%  Similarity=0.403  Sum_probs=59.1

Q ss_pred             eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814          121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s  186 (187)
                      ..+++|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+   ++.+.|.+.|++.|| +++++
T Consensus         8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   78 (84)
T 1q8l_A            8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKK   78 (84)
T ss_dssp             CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSC
T ss_pred             ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecC
Confidence            35678999 99999999999999999999999999999999999853   578899999999998 77654

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=99.07  E-value=4.8e-10  Score=75.06  Aligned_cols=66  Identities=23%  Similarity=0.422  Sum_probs=58.6

Q ss_pred             eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814          121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s  186 (187)
                      |.+..|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+   .+.+.|.+.|++.|| +.+++
T Consensus         2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~   72 (80)
T 1jww_A            2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG   72 (80)
T ss_dssp             CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECC
T ss_pred             ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecC
Confidence            45678999 99999999999999999999999999999999999743   578889999999998 76653

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=99.06  E-value=6.9e-10  Score=71.70  Aligned_cols=61  Identities=26%  Similarity=0.511  Sum_probs=55.2

Q ss_pred             eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC
Q 029814          121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR  181 (187)
Q Consensus       121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk  181 (187)
                      +.+.+|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+   .+.+.+.+.|++.||
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~   66 (71)
T 2ldi_A            2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGY   66 (71)
T ss_dssp             CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTC
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCC
Confidence            35578999 99999999999999999999999999999999999743   577889999999998

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=99.06  E-value=5.4e-10  Score=71.82  Aligned_cols=59  Identities=24%  Similarity=0.440  Sum_probs=53.9

Q ss_pred             EEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhCCC
Q 029814          123 VVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH--ISPTGVLESISKVKR  181 (187)
Q Consensus       123 tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~--v~~eeIveaIekaGk  181 (187)
                      +.+|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+  .+.+.|.+.|++.||
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~   63 (66)
T 1yg0_A            2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQ   63 (66)
T ss_dssp             EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTC
T ss_pred             eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCC
Confidence            357899 99999999999999999999999999999999999853  478889999999997

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=99.06  E-value=4.4e-10  Score=73.91  Aligned_cols=60  Identities=25%  Similarity=0.527  Sum_probs=54.0

Q ss_pred             EEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEec
Q 029814          124 VVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       124 v~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~  185 (187)
                      .+|.| ||+|.+|..+|+++|.++ ||..+.+|+..+++.|..+.. +.|.+.|++.|| +.++
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~~   64 (67)
T 2kyz_A            3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVESY   64 (67)
T ss_dssp             EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCBC
T ss_pred             EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceeeE
Confidence            57999 999999999999999999 999999999999999986555 889999999998 5543

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=99.03  E-value=7.2e-10  Score=73.11  Aligned_cols=63  Identities=22%  Similarity=0.462  Sum_probs=56.0

Q ss_pred             EEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEec
Q 029814          123 VVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       123 tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~  185 (187)
                      ++.|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|.++   .+.+.|.+.|++.|| +.+.
T Consensus         5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   72 (75)
T 1yjr_A            5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLV   72 (75)
T ss_dssp             CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEES
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceee
Confidence            457999 99999999999999999999999999999999999854   456889999999998 6654

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=99.01  E-value=1.1e-09  Score=81.71  Aligned_cols=64  Identities=20%  Similarity=0.434  Sum_probs=58.1

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEec
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~  185 (187)
                      .++.|.| ||+|.+|+.+|+++|++++||..+.+|+.++++.|.++   ++.++|.++|++.|| ++++
T Consensus        80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~  148 (149)
T 2ew9_A           80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA  148 (149)
T ss_dssp             SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred             ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence            3568999 99999999999999999999999999999999999853   578999999999998 7765

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=98.98  E-value=3.5e-09  Score=74.86  Aligned_cols=69  Identities=19%  Similarity=0.346  Sum_probs=60.5

Q ss_pred             CCceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814          118 DQVFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       118 ~~~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s  186 (187)
                      ...|.+..|.| ||+|.+|...|++.|..++||..+.+|+..+.+.|..+   ++.+.|.+.|+..|| +.++.
T Consensus        12 ~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   85 (95)
T 2kkh_A           12 VKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRV   85 (95)
T ss_dssp             SSCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred             ccceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEec
Confidence            34567789999 99999999999999999999999999999999999853   478899999999998 66643

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.96  E-value=1.8e-09  Score=81.13  Aligned_cols=65  Identities=23%  Similarity=0.440  Sum_probs=59.0

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s  186 (187)
                      .++.|.| ||+|.+|+++|+++|.+++||..+.+|+.++++.|..+   ++.+.|.+.|++.|| +.+++
T Consensus        74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~  143 (151)
T 1p6t_A           74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG  143 (151)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred             cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcC
Confidence            4578999 99999999999999999999999999999999999843   688999999999998 77764

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=98.88  E-value=4.9e-09  Score=69.37  Aligned_cols=56  Identities=29%  Similarity=0.622  Sum_probs=49.3

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR  181 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk  181 (187)
                      .+.+|.| ||+|.+|..+|+++|.+++||..+.+|+..+++.|.+...    .+.|+++||
T Consensus         3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy   59 (71)
T 2aj0_A            3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGA   59 (71)
T ss_dssp             CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHT
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCC
Confidence            3568999 9999999999999999999999999999999999987654    456777886

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.86  E-value=1.1e-08  Score=81.73  Aligned_cols=65  Identities=23%  Similarity=0.453  Sum_probs=58.5

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s  186 (187)
                      .++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..+++.|..+   ++.+.|.+.|++.|| +.+++
T Consensus       122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~  191 (202)
T 2rop_A          122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVS  191 (202)
T ss_dssp             EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC-
T ss_pred             eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcC
Confidence            4678999 99999999999999999999999999999999999853   578999999999998 77764

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.83  E-value=1.4e-08  Score=75.75  Aligned_cols=65  Identities=20%  Similarity=0.366  Sum_probs=57.9

Q ss_pred             eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEe---cCCHHHHHHHHHhCCC-eEec
Q 029814          121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG---HISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g---~v~~eeIveaIekaGk-AeL~  185 (187)
                      |++++|.| ||+|.+|..+|++.|.+++||..+.+|+.++++.|..   ..+.+.+.+.|++.|| +.++
T Consensus         3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   72 (149)
T 2ew9_A            3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVM   72 (149)
T ss_dssp             CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred             cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEee
Confidence            67789999 9999999999999999999999999999999999874   2577889999999998 5543

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.82  E-value=1.4e-08  Score=84.72  Aligned_cols=65  Identities=18%  Similarity=0.506  Sum_probs=59.7

Q ss_pred             eEEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEecc
Q 029814          122 QVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       122 ~tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~s  186 (187)
                      .+++|.|.|+|.+|+.+|+++|++++||.++++|+.+++++|.+..+.++|.++|++.|| ++++.
T Consensus         6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~   71 (222)
T 1qup_A            6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRG   71 (222)
T ss_dssp             EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEEC
T ss_pred             eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCcccccc
Confidence            456788899999999999999999999999999999999999988899999999999998 77764

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.67  E-value=6.2e-08  Score=82.38  Aligned_cols=63  Identities=19%  Similarity=0.540  Sum_probs=58.3

Q ss_pred             EEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEec
Q 029814          123 VVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       123 tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~  185 (187)
                      +++|.|.|+|.+|+.+|+++|.+++||.++++|+.+++++|.+..+.++|.++|++.|| ++++
T Consensus         8 ~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~   71 (249)
T 1jk9_B            8 EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIR   71 (249)
T ss_dssp             EEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEE
T ss_pred             eEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccc
Confidence            45788889999999999999999999999999999999999987899999999999998 7664

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.52  E-value=3e-07  Score=73.27  Aligned_cols=61  Identities=23%  Similarity=0.509  Sum_probs=53.4

Q ss_pred             CceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhC
Q 029814          119 QVFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKV  179 (187)
Q Consensus       119 ~~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIeka  179 (187)
                      ..+.+++|.| ||+|.+|+.+|+++|.+++||..+.+++..+++.|..+   .+.+.|.+.|++.
T Consensus        17 ~~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~   81 (202)
T 2rop_A           17 SHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEAL   81 (202)
T ss_dssp             ---CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTS
T ss_pred             CccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHh
Confidence            3456678999 99999999999999999999999999999999999743   5788899999988

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.47  E-value=5.1e-07  Score=67.60  Aligned_cols=61  Identities=30%  Similarity=0.551  Sum_probs=54.1

Q ss_pred             eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC
Q 029814          121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR  181 (187)
Q Consensus       121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk  181 (187)
                      +.+..|.| ||+|.+|..+|++.|.+++||..+.+++..+++.+...   .+...+.+.+++.||
T Consensus         5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~   69 (151)
T 1p6t_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGY   69 (151)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTC
T ss_pred             ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCC
Confidence            35578999 99999999999999999999999999999999998742   577889999998887

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.30  E-value=1.1e-06  Score=83.87  Aligned_cols=59  Identities=19%  Similarity=0.340  Sum_probs=54.9

Q ss_pred             EEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC
Q 029814          123 VVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR  181 (187)
Q Consensus       123 tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk  181 (187)
                      +++|.| ||+|.+|+.+|++.|.+++||.++++|+.++++.|..+   .+.+++.++|++.||
T Consensus         3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy   65 (723)
T 3j09_A            3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGY   65 (723)
T ss_dssp             CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCC
T ss_pred             eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCC
Confidence            367999 99999999999999999999999999999999999853   689999999999997

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	187
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	4e-14
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	2e-12
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	1e-11
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	3e-11
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	3e-10
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	3e-10
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	3e-10
d1q8la_	84	d.58.17.1 (A:) Menkes copper-transporting ATPase {	2e-09
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	3e-09
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	3e-09
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	3e-09
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	8e-09
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	1e-08
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	2e-08

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.1 bits (151), Expect = 4e-14
 Identities = 11/63 (17%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 116 SSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLES 175
           +++  ++     + +HC+ C   +K  L  + G+ S + D+E + ++V   ++P+ ++ +
Sbjct: 1   TTNDTYEAT-YAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINT 59

Query: 176 ISK 178
           +  
Sbjct: 60  LRN 62

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.9 bits (140), Expect = 2e-12
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 122 QVVVMRVSLHCQGCAGKLKKHLSKME-GVTSFSIDLETKRVTVMGHISPTGVLESISK 178
           +     V + C GC+G + K L+K+E  V+   I LE + V V   +    +LE I K
Sbjct: 4   KHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKK 61

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 55.6 bits (134), Expect = 1e-11
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 126 MRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKV-KRAEF 184
             V + C GCA  + + L+K+ G   + IDL  K+V +    S   +L ++ K  K   +
Sbjct: 5   FSVDMTCGGCAEAVSRVLNKLGG-VKYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSY 63

Query: 185 W 185
            
Sbjct: 64  L 64

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 54.4 bits (131), Expect = 3e-11
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 122 QVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLESIS 177
           Q V + V  + C  C   +KK +SK+EGV+   +  ET++  V       S   + ++ +
Sbjct: 3   QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA 62

Query: 178 K 178
            
Sbjct: 63  D 63

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (125), Expect = 3e-10
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 122 QVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLESIS 177
           Q  V+ +  + C  C   ++  +SK  GV S  + L     TV       SP  +  +I 
Sbjct: 3   QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62

Query: 178 K 178
            
Sbjct: 63  D 63

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 51.7 bits (124), Expect = 3e-10
 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 122 QVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVK 180
           + + M+VS + C  CA +++K L +M GVT  +++L T+ V V+   + TG      K++
Sbjct: 6   KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE 65

Query: 181 RAEF 184
           +  +
Sbjct: 66  KLGY 69

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.7 bits (124), Expect = 3e-10
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 3/60 (5%)

Query: 122 QVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM--GHISPTGVLESISK 178
           + V++ V  + C  C   +   L  ++GVT   I L T    V     ++   + E I  
Sbjct: 2   REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIED 61

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 2e-09
 Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 122 QVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVK 180
            V+ M+V  + C  C   ++  + K++GV    + L+ +  T++       V E   +++
Sbjct: 9   VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE 68

Query: 181 RAEF 184
              F
Sbjct: 69  AMGF 72

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 49.4 bits (118), Expect = 3e-09
 Identities = 12/63 (19%), Positives = 30/63 (47%), Gaps = 7/63 (11%)

Query: 119 QVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM---GHISPTGVLES 175
           Q F V  M     C  C  ++++ + ++ GV    + L+ ++  V     ++  T + ++
Sbjct: 2   QEFSVKGM----SCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQA 57

Query: 176 ISK 178
           I++
Sbjct: 58  INE 60

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 49.0 bits (117), Expect = 3e-09
 Identities = 10/55 (18%), Positives = 26/55 (47%)

Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRAEF 184
           + CQ C   ++  + +++GV++  ++LE  +V V        V +    ++   +
Sbjct: 11  MSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGY 65

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 49.2 bits (117), Expect = 3e-09
 Identities = 11/56 (19%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 124 VVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISK 178
           + + V  + C+ CA  + K +   +   +  +DL +K+VT+   +    +  +I+ 
Sbjct: 3   IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIAS 58

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (115), Expect = 8e-09
 Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 124 VVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRA 182
           V + V  + C  C   +++ + K+ GV    + LE K  T++              +   
Sbjct: 10  VTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDM 69

Query: 183 EF 184
            F
Sbjct: 70  GF 71

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 48.0 bits (114), Expect = 1e-08
 Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 122 QVVVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVK 180
           +     +  + C  CA +++K L+K+EGV +  ++   + VTV  +     V +    V 
Sbjct: 2   EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD 61

Query: 181 RAEF 184
           +  +
Sbjct: 62  KLGY 65

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 47.1 bits (112), Expect = 2e-08
 Identities = 10/55 (18%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRAEF 184
           + C  CA K++  + ++ GV    +   T+++ V          +  S +++A +
Sbjct: 12  MDCAACARKVENAVRQLAGVNQVQVLFATEKLVV--DADNDIRAQVESALQKAGY 64

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	187
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.58
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.54
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.52
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.52
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.5
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.49
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.48
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.47
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.47
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.46
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.4
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.39
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.36
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.34
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	91.39
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	89.78
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	81.74

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.58  E-value=3.8e-15  Score=101.74  Aligned_cols=63  Identities=27%  Similarity=0.521  Sum_probs=59.7

Q ss_pred             EEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEecc
Q 029814          123 VVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       123 tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~s  186 (187)
                      +++|.|+|+|++|+++|+++|++++|+ ++++|+.+++++|+++++++.|+++|+++|| |+||.
T Consensus         2 k~ef~V~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~~~Gy~a~lig   65 (66)
T d1fe0a_           2 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG   65 (66)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEE
T ss_pred             CEEEEEccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCHHHHHHHHHHhCCeEEEee
Confidence            578999999999999999999999998 6999999999999999999999999999998 99873

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.54  E-value=1.1e-14  Score=100.83  Aligned_cols=63  Identities=19%  Similarity=0.540  Sum_probs=60.2

Q ss_pred             EEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEec
Q 029814          123 VVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       123 tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~  185 (187)
                      +.+|.|+|+|++|+++|+++|++++||.++.+|+.+++++|++.+++++|+++|++.|| |.|.
T Consensus         7 ~~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~G~~A~l~   70 (72)
T d1qupa2           7 EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIR   70 (72)
T ss_dssp             EEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEE
T ss_pred             EEEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHHHhCCCEEEe
Confidence            46799999999999999999999999999999999999999999999999999999998 8875

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.52  E-value=2.9e-14  Score=98.74  Aligned_cols=62  Identities=29%  Similarity=0.499  Sum_probs=59.3

Q ss_pred             ceeEEEEEecccchhHHHHHHHHhhcc-CCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC
Q 029814          120 VFQVVVMRVSLHCQGCAGKLKKHLSKM-EGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR  181 (187)
Q Consensus       120 ~~~tv~f~VGM~C~sCa~kIekaL~~l-~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk  181 (187)
                      .+++++|.|+|+|++|+++|+++|+++ +||.++++|+.+++++|.+.+++++|.++|+++||
T Consensus         2 ~~kt~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~   64 (72)
T d1cc8a_           2 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGK   64 (72)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSS
T ss_pred             CcEEEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHHHHCC
Confidence            468899999999999999999999999 59999999999999999999999999999999998

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.52  E-value=1.5e-14  Score=99.56  Aligned_cols=65  Identities=23%  Similarity=0.440  Sum_probs=60.5

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEe--cCCHHHHHHHHHhCCC-eEecc
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG--HISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g--~v~~eeIveaIekaGk-AeL~s  186 (187)
                      ++++|.| ||+|++|+.+|+++|.+++||.++++|+.+++++|..  ..+.++|.++|+++|| ++++.
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~a~~~~   70 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHTTCCCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHhCCCeEEcc
Confidence            5689999 9999999999999999999999999999999999984  4789999999999999 98874

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.50  E-value=4.6e-14  Score=96.11  Aligned_cols=61  Identities=18%  Similarity=0.461  Sum_probs=57.4

Q ss_pred             EEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEe---cCCHHHHHHHHHhCCC-eEec
Q 029814          125 VMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG---HISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       125 ~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g---~v~~eeIveaIekaGk-AeL~  185 (187)
                      +|.| ||+|++|+.+|+++|++++||.++++|+.+++++|..   .++.++|.++|+++|| ++++
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~vi   68 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEEC
Confidence            6899 9999999999999999999999999999999999984   3789999999999998 8875

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.49  E-value=6.1e-14  Score=96.48  Aligned_cols=64  Identities=25%  Similarity=0.412  Sum_probs=59.8

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEe---cCCHHHHHHHHHhCCC-eEec
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG---HISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g---~v~~eeIveaIekaGk-AeL~  185 (187)
                      ++++|.| ||+|++|+.+|++.|++++||.++++|+.++++.|..   .++.++|.+.|++.|| ++|+
T Consensus         3 qt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v~   71 (72)
T d1osda_           3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhcCCCeEeC
Confidence            6789999 9999999999999999999999999999999999984   3789999999999998 8875

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.48  E-value=1.9e-14  Score=97.14  Aligned_cols=61  Identities=20%  Similarity=0.463  Sum_probs=58.1

Q ss_pred             EEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eE
Q 029814          123 VVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AE  183 (187)
Q Consensus       123 tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-Ae  183 (187)
                      +++|.| ||+|++|+.+|+++|++++||.++++|+.+++++|.+.+++++|.++|+++|| +|
T Consensus         2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~~GY~ve   64 (64)
T d1sb6a_           2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGHEVE   64 (64)
T ss_dssp             EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHHHCCCCC
T ss_pred             eEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHHcCCCCC
Confidence            468999 99999999999999999999999999999999999998999999999999998 64

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.4e-13  Score=96.28  Aligned_cols=70  Identities=21%  Similarity=0.400  Sum_probs=64.0

Q ss_pred             CCceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEeccC
Q 029814          118 DQVFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWPC  187 (187)
Q Consensus       118 ~~~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s~  187 (187)
                      ...+.+++|.| ||+|++|+.+|+++|++++||.++++|+.+++++|..+   ++..+|.++|+++|| +.+.++
T Consensus         4 ~~~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~~~   78 (79)
T d1kvja_           4 SMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNP   78 (79)
T ss_dssp             STTCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSC
T ss_pred             CCCceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhcCCCcEeCCC
Confidence            35678899999 99999999999999999999999999999999999843   799999999999999 887654

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.1e-13  Score=94.85  Aligned_cols=64  Identities=25%  Similarity=0.369  Sum_probs=59.4

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEe---cCCHHHHHHHHHhCCC-eEec
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG---HISPTGVLESISKVKR-AEFW  185 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g---~v~~eeIveaIekaGk-AeL~  185 (187)
                      ++..|+| ||+|++|+.+|+++|.+++||.++++|+.+++++|..   .++.++|.++|+++|| ++|.
T Consensus         3 ~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l~   71 (72)
T d2aw0a_           3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred             EEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEeC
Confidence            5678999 9999999999999999999999999999999999984   3789999999999999 8775

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.46  E-value=1.5e-13  Score=93.62  Aligned_cols=61  Identities=20%  Similarity=0.457  Sum_probs=57.6

Q ss_pred             eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC
Q 029814          121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR  181 (187)
Q Consensus       121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk  181 (187)
                      |++.+|+| ||+|++|+.+|+++|++++||.++++|+.+++++|..+   ++.++|.+.|++.||
T Consensus         1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy   65 (69)
T d2qifa1           1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGY   65 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTC
T ss_pred             CcEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHhCC
Confidence            57889999 99999999999999999999999999999999999843   789999999999998

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=4.6e-13  Score=94.86  Aligned_cols=68  Identities=21%  Similarity=0.359  Sum_probs=61.4

Q ss_pred             CceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEe---cCCHHHHHHHHHhCCC-eEecc
Q 029814          119 QVFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG---HISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       119 ~~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g---~v~~eeIveaIekaGk-AeL~s  186 (187)
                      .....++|.| ||+|.+|+.+|+++|++++||.++++|+.+++++|..   .++.+.|.+.|+++|| +.+..
T Consensus         6 ~~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~~   78 (84)
T d1q8la_           6 AGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKK   78 (84)
T ss_dssp             SSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSC
T ss_pred             CCCEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHHhCCccEEcC
Confidence            4456789999 9999999999999999999999999999999999984   3789999999999998 77753

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.39  E-value=4e-13  Score=93.84  Aligned_cols=65  Identities=23%  Similarity=0.436  Sum_probs=60.1

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEe---cCCHHHHHHHHHhCCC-eEecc
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG---HISPTGVLESISKVKR-AEFWP  186 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g---~v~~eeIveaIekaGk-AeL~s  186 (187)
                      ++++|.| ||+|.+|+.+|++.|..++||.++++|+.++++.|.+   .++.++|.++|+++|| +.+++
T Consensus         2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (79)
T d1p6ta2           2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG   71 (79)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHHHCCceEECC
Confidence            4678999 9999999999999999999999999999999999985   3789999999999998 88764

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.36  E-value=8.3e-13  Score=90.43  Aligned_cols=61  Identities=30%  Similarity=0.551  Sum_probs=57.1

Q ss_pred             eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEe---cCCHHHHHHHHHhCCC
Q 029814          121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG---HISPTGVLESISKVKR  181 (187)
Q Consensus       121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g---~v~~eeIveaIekaGk  181 (187)
                      ..+++|+| ||+|++|+.+|+++|.+++||.++++|+.+++++|..   .++.++|.++|+++||
T Consensus         5 ~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy   69 (72)
T d1p6ta1           5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGY   69 (72)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTC
T ss_pred             ceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHhCC
Confidence            35789999 9999999999999999999999999999999999974   3789999999999998

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=1.2e-12  Score=90.09  Aligned_cols=62  Identities=18%  Similarity=0.327  Sum_probs=56.7

Q ss_pred             eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec-CCHHHHHHHHHhCCC-eE
Q 029814          122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH-ISPTGVLESISKVKR-AE  183 (187)
Q Consensus       122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~-v~~eeIveaIekaGk-Ae  183 (187)
                      ++++|.| ||+|++|+.+|+++|.+++||.++++|+.+++++|..+ ...++|.+.|.++|| ++
T Consensus         3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~GY~v~   67 (73)
T d1mwza_           3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLR   67 (73)
T ss_dssp             CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCCCC
T ss_pred             CEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHHHcCCccc
Confidence            4578999 99999999999999999999999999999999999864 457899999999998 54

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.39  E-value=0.0073  Score=39.64  Aligned_cols=51  Identities=10%  Similarity=0.171  Sum_probs=34.2

Q ss_pred             cccccceeccccceeeeccCCCCCeeEeecCCCCCCCCcccCCCCcccccceeeeeh---------hhccCCCCC
Q 029814            2 RVRGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLIKYSK---------LIDNSHHPP   67 (187)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~   67 (187)
                      .+.||.|.+|       +     .+|+-.-...| |+..+++.  +......|.|++         ++++.||.+
T Consensus         7 ~V~GM~C~~C-------~-----~~Ie~~l~~~~-gV~~v~V~--~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~a   66 (72)
T d2ggpb1           7 AVHGMTCSAC-------T-----NTINTQLRALK-GVTKCDIS--LVTNECQVTYDNEVTADSIKEIIEDCGFDC   66 (72)
T ss_dssp             ECTTCCSSTT-------T-----HHHHHHHTTST-TEEEEEEC--TTTCEEEEEECSSCCHHHHHHHHHHTTCCC
T ss_pred             EECCcccHHH-------H-----HHHHHHHhcCC-CceEEEEE--CCCCEEEEEECCCCCHHHHHHHHHHhCCCe
Confidence            5899999999       4     55665555544 66667666  555666677764         344777765

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.78  E-value=0.014  Score=39.56  Aligned_cols=55  Identities=20%  Similarity=0.310  Sum_probs=33.0

Q ss_pred             CcccccceeccccceeeeccCCCCCeeEeecCCCCCCCCcccCCCCcccccceeeeeh----------hhccCCCCCCCc
Q 029814            1 MRVRGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLIKYSK----------LIDNSHHPPSSN   70 (187)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~   70 (187)
                      ++|.||+|.+|       +     .+|+-.-...| |+..++..  +...+..|.|.+          ++++.||+++..
T Consensus        13 l~V~GMtC~~C-------~-----~~Ie~~l~~~~-GV~~v~vn--~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~   77 (84)
T d1q8la_          13 MKVEGMTCHSC-------T-----STIEGKIGKLQ-GVQRIKVS--LDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVK   77 (84)
T ss_dssp             EEECCTTTCSS-------C-----HHHHHHHHTCT-TEEEEEEC--STTTEEEEEECTTTCCHHHHHHHHHHTTCCEECS
T ss_pred             EEECCeEcHHH-------H-----HHHHHHHhcCC-CceEEEEE--CCCCEEceeecccccCHHHHHHHHHHhCCccEEc
Confidence            47899999999       3     45554445434 55555554  444444455553          455888875433

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.74  E-value=0.039  Score=35.81  Aligned_cols=43  Identities=19%  Similarity=0.385  Sum_probs=28.0

Q ss_pred             CcccccceeccccceeeeccCCCCCeeEeecCCCCCCCCcccCCCCcccccceeeeeh
Q 029814            1 MRVRGLMCQSTAAATAVCMPNDSASSVIVPRSRRPPADDHYRNTPIDDDHTRLIKYSK   58 (187)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   58 (187)
                      ++|.||.|.+|       +     ..|+-.-...| |+..+++.  +......|.|++
T Consensus         7 l~V~GM~C~~C-------~-----~~Ie~~l~~~~-GV~~v~v~--~~~~~v~v~~d~   49 (72)
T d2aw0a_           7 INIDGMTCNSC-------V-----QSIEGVISKKP-GVKSIRVS--LANSNGTVEYDP   49 (72)
T ss_dssp             EEEECCCSHHH-------H-----HHHHHHHHTST-TCCCEEEE--TTTTEEEEEECT
T ss_pred             EEECCcccHHH-------H-----HHHHHHHhcCC-CcEEEEEE--CCCCEEEEEECC
Confidence            36899999999       3     45555555544 66666665  555566677754