Citrus Sinensis ID: 029821


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------
MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVCWGAAYKITKKEDKEVAVTYLEVREKQYDKKAYLDLFTDPMATTPAVSGVMVYIASANKQLNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKALLELGCEDKHVIDLANTVRRILSEEDSASK
cEEEEEcccccccccccccEEEEEEEcEEEEcccccccccccccccccEEEEEEcccccEEEEEEEEccccHHHHHHHHHHHHHHccccccEEEEEEccccccccEEEEEEEEEEccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccHHcccc
cEEEEccEEEEccccccccEEEEEEEccEEEEEEcccccccccccccEEEEEEcccccEEEEEEEEEccccHHHHHHHHHHHHHHccccEEEEEEEccccccccccEEEEEEEEcccccccccHcccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccc
MWVFGYGSLIwkagfhfdERVVGFIKGYRRVfhqgstdhrgtpkfpgrtvtlepaegevcwgAAYKITKKEDKEVAVTYLEVREKQYDKKAYldlftdpmattpavSGVMVYIASANKqlnsnylgpasLEDIAKQIIQaegpsgpnrDYLFQLEKALLELGCEDKHVIDLANTVRRILSEEDSASK
MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHqgstdhrgtpkfpgrtvtlepaegevCWGAaykitkkedkEVAVTYLEVREKQYDKKAYLDLFTDPMATTPAVSGVMVYIASANKQLNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKALLELGCEDKHVIDLANTvrrilseedsask
MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVCWGAAYKITKKEDKEVAVTYLEVREKQYDKKAYLDLFTDPMATTPAVSGVMVYIASANKQLNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKALLELGCEDKHVIDLANTVRRILSEEDSASK
*WVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGST*******FPGRTVTLEPAEGEVCWGAAYKITKKEDKEVAVTYLEVREKQYDKKAYLDLFTDPMATTPAVSGVMVYIASANKQLNSNYLGPASLEDIAKQIIQA******NRDYLFQLEKALLELGCEDKHVIDLANTVRRI*********
MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVCWGAAYKITKKEDKEVAVTYLEVREKQYDKKAYLDLFTDPMATTPAVSGVMVYIASANKQLNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKALLELGCEDKHVIDLANTVR***********
MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVCWGAAYKITKKEDKEVAVTYLEVREKQYDKKAYLDLFTDPMATTPAVSGVMVYIASANKQLNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKALLELGCEDKHVIDLANTVRRIL********
MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVCWGAAYKITKKEDKEVAVTYLEVREKQYDKKAYLDLFTDPMATTPAVSGVMVYIASANKQLNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKALLELGCEDKHVIDLANTVRRILSE******
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVCWGAAYKITKKEDKEVAVTYLEVREKQYDKKAYLDLFTDPMATTPAVSGVMVYIASANKQLNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKALLELGCEDKHVIDLANTVRRILSEEDSASK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query187 2.2.26 [Sep-21-2011]
Q4KMJ1182 Cation transport regulato yes no 0.946 0.972 0.473 3e-36
Q641Z5178 Cation transport regulato yes no 0.925 0.971 0.464 4e-36
Q9CQG1178 Cation transport regulato yes no 0.925 0.971 0.464 5e-36
Q5PPV4184 Cation transport regulato N/A no 0.914 0.929 0.475 2e-35
Q8WUX2184 Cation transport regulato yes no 0.925 0.940 0.441 6e-34
Q5ZI66186 Cation transport regulato yes no 0.903 0.908 0.469 8e-34
Q0IIH4176 Cation transport regulato yes no 0.860 0.914 0.436 4e-31
Q5SPB6196 Cation transport regulato no no 0.914 0.872 0.407 8e-27
B3STU3222 Cation transport regulato no no 0.919 0.774 0.385 5e-26
Q8R3J5223 Cation transport regulato no no 0.919 0.771 0.385 8e-26
>sp|Q4KMJ1|CHAC2_DANRE Cation transport regulator-like protein 2 OS=Danio rerio GN=chac2 PE=2 SV=1 Back     alignment and function desciption
 Score =  151 bits (381), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/186 (47%), Positives = 115/186 (61%), Gaps = 9/186 (4%)

Query: 1   MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTL-EPAEGEV 59
           MWVFGYGSLIWK  F ++++ VGF+KG+ R F QGSTDHRG P  PGR VTL E  EG V
Sbjct: 1   MWVFGYGSLIWKVDFPYEDKRVGFVKGFSRRFWQGSTDHRGVPGKPGRVVTLIEDPEGCV 60

Query: 60  CWGAAYKITKKEDKEVAVTYLEVREKQYDKKAYLDLFTDPMATTPAVSGVMVYIASANKQ 119
            WG AYK+   +++EV   YL+ REK       +          P +   ++YI S +  
Sbjct: 61  -WGVAYKLPSGQEQEVK-EYLDYREKGGYGVITVTFHPKDEQQQP-MQDTLLYIGSCD-- 115

Query: 120 LNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKALLELGCE--DKHVIDLANTVRR 177
            N NYLGPA LE IA+QI+++ GPSG N DYLF+L  AL +L  E  D H+  L   V++
Sbjct: 116 -NPNYLGPAPLETIAQQIVKSVGPSGKNTDYLFELADALRQLVPEDLDDHLFSLERLVKQ 174

Query: 178 ILSEED 183
           +  +ED
Sbjct: 175 LQEQED 180





Danio rerio (taxid: 7955)
>sp|Q641Z5|CHAC2_RAT Cation transport regulator-like protein 2 OS=Rattus norvegicus GN=Chac2 PE=2 SV=1 Back     alignment and function description
>sp|Q9CQG1|CHAC2_MOUSE Cation transport regulator-like protein 2 OS=Mus musculus GN=Chac2 PE=2 SV=1 Back     alignment and function description
>sp|Q5PPV4|CHAC2_XENLA Cation transport regulator-like protein 2 OS=Xenopus laevis GN=chac2 PE=2 SV=1 Back     alignment and function description
>sp|Q8WUX2|CHAC2_HUMAN Cation transport regulator-like protein 2 OS=Homo sapiens GN=CHAC2 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZI66|CHAC2_CHICK Cation transport regulator-like protein 2 OS=Gallus gallus GN=chac2 PE=2 SV=1 Back     alignment and function description
>sp|Q0IIH4|CHAC2_BOVIN Cation transport regulator-like protein 2 OS=Bos taurus GN=CHAC2 PE=2 SV=1 Back     alignment and function description
>sp|Q5SPB6|CHAC1_DANRE Cation transport regulator-like protein 1 OS=Danio rerio GN=chac1 PE=2 SV=1 Back     alignment and function description
>sp|B3STU3|CHAC1_RAT Cation transport regulator-like protein 1 OS=Rattus norvegicus GN=Chac1 PE=2 SV=1 Back     alignment and function description
>sp|Q8R3J5|CHAC1_MOUSE Cation transport regulator-like protein 1 OS=Mus musculus GN=Chac1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query187
225459528189 PREDICTED: cation transport regulator-li 0.978 0.968 0.786 1e-86
351727757185 uncharacterized protein LOC100305985 [Gl 0.973 0.983 0.818 4e-86
388506294185 unknown [Lotus japonicus] 0.973 0.983 0.796 4e-85
224082274182 predicted protein [Populus trichocarpa] 0.967 0.994 0.817 4e-85
255545466190 Cation transport protein chaC, putative 0.973 0.957 0.791 5e-84
357438635185 Cation transport regulator-like protein 0.973 0.983 0.780 9e-84
217075360221 unknown [Medicago truncatula] 0.957 0.809 0.776 2e-82
449455246190 PREDICTED: cation transport regulator-li 0.967 0.952 0.763 1e-79
18401334199 cation transport protein ChaC [Arabidops 0.978 0.919 0.754 1e-76
12083292197 unknown protein [Arabidopsis thaliana] 0.978 0.928 0.754 1e-76
>gi|225459528|ref|XP_002285846.1| PREDICTED: cation transport regulator-like protein 2 [Vitis vinifera] gi|302141833|emb|CBI19036.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  324 bits (830), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 144/183 (78%), Positives = 173/183 (94%)

Query: 1   MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVC 60
           +WVFGYGSLIWKAGF +D+R V FIKGYRRVF+QGSTDHRGTP++PGRTVTLEPAEGE+C
Sbjct: 3   LWVFGYGSLIWKAGFEYDDRRVCFIKGYRRVFYQGSTDHRGTPEYPGRTVTLEPAEGEIC 62

Query: 61  WGAAYKITKKEDKEVAVTYLEVREKQYDKKAYLDLFTDPMATTPAVSGVMVYIASANKQL 120
           WG AYK++K+ED+++A+TYLEVREKQYDKKAYLD++ +PMATTP +SGVMVYIAS +K+L
Sbjct: 63  WGVAYKVSKEEDEQIALTYLEVREKQYDKKAYLDVYAEPMATTPVISGVMVYIASPDKKL 122

Query: 121 NSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKALLELGCEDKHVIDLANTVRRILS 180
           N NYLGPAS+E+IAKQII AEGPSGPNR+YLFQLE+ALL++GCEDKHV+DLAN VRRILS
Sbjct: 123 NRNYLGPASVEEIAKQIIHAEGPSGPNREYLFQLEQALLQMGCEDKHVMDLANEVRRILS 182

Query: 181 EED 183
           E++
Sbjct: 183 EKE 185




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727757|ref|NP_001235892.1| uncharacterized protein LOC100305985 [Glycine max] gi|255627195|gb|ACU13942.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388506294|gb|AFK41213.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|224082274|ref|XP_002306627.1| predicted protein [Populus trichocarpa] gi|222856076|gb|EEE93623.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255545466|ref|XP_002513793.1| Cation transport protein chaC, putative [Ricinus communis] gi|223546879|gb|EEF48376.1| Cation transport protein chaC, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357438635|ref|XP_003589593.1| Cation transport regulator-like protein [Medicago truncatula] gi|355478641|gb|AES59844.1| Cation transport regulator-like protein [Medicago truncatula] gi|388508216|gb|AFK42174.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|217075360|gb|ACJ86040.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|449455246|ref|XP_004145364.1| PREDICTED: cation transport regulator-like protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|18401334|ref|NP_564490.1| cation transport protein ChaC [Arabidopsis thaliana] gi|29893538|gb|AAP06821.1| unknown protein [Arabidopsis thaliana] gi|110736693|dbj|BAF00310.1| hypothetical protein [Arabidopsis thaliana] gi|332193931|gb|AEE32052.1| cation transport protein ChaC [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|12083292|gb|AAG48805.1|AF332442_1 unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query187
TAIR|locus:2194854199 AT1G44790 "AT1G44790" [Arabido 0.978 0.919 0.754 6.7e-72
TAIR|locus:2128096227 AT4G31290 "AT4G31290" [Arabido 0.983 0.810 0.535 4e-51
TAIR|locus:2179714216 AT5G26220 "AT5G26220" [Arabido 0.957 0.828 0.516 1.8e-48
ZFIN|ZDB-GENE-050706-146182 chac2 "ChaC, cation transport 0.946 0.972 0.473 1.7e-36
MGI|MGI:1915294178 Chac2 "ChaC, cation transport 0.925 0.971 0.475 1.2e-35
UNIPROTKB|Q8WUX2184 CHAC2 "Cation transport regula 0.919 0.934 0.461 9.5e-34
FB|FBgn0030411311 CG2540 [Drosophila melanogaste 0.946 0.569 0.391 3.8e-30
UNIPROTKB|F1P0B7224 CHAC1 "Uncharacterized protein 0.925 0.772 0.416 4.9e-30
DICTYBASE|DDB_G0286727 322 DDB_G0286727 "chaC-like family 0.935 0.543 0.388 9.1e-29
ZFIN|ZDB-GENE-030131-1957196 chac1 "ChaC, cation transport 0.914 0.872 0.407 5e-28
TAIR|locus:2194854 AT1G44790 "AT1G44790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 138/183 (75%), Positives = 155/183 (84%)

Query:     1 MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVC 60
             MWVFGYGSLIWK GF FDE + GFIKGYRRVFHQGSTDHRGTP FPGRTVTLE A  EVC
Sbjct:     3 MWVFGYGSLIWKTGFPFDESLPGFIKGYRRVFHQGSTDHRGTPDFPGRTVTLEAAHEEVC 62

Query:    61 WGAAYKITKKEDKEVAVTYLEVREKQYDKKAYLDLFTDPMATTPAVSGVMVYIASANKQL 120
              G AYKITK+EDK  A+ +LEVREKQYD+K YLD FTD  A+ PAV+GVMVYIAS +K+ 
Sbjct:    63 CGVAYKITKEEDKRDALLHLEVREKQYDQKEYLDFFTDSNASEPAVAGVMVYIASPDKKS 122

Query:   121 NSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKALLELGCEDKHVIDLANTVRRILS 180
             N+NYLGPA LEDIAKQI++A+GPSGPNRDYLF LE+AL +LG +DKHV DLAN VR ILS
Sbjct:   123 NNNYLGPAPLEDIAKQIVKAKGPSGPNRDYLFNLEEALAQLGFKDKHVTDLANQVRHILS 182

Query:   181 EED 183
             E +
Sbjct:   183 ESE 185




GO:0003674 "molecular_function" evidence=ND
GO:0005737 "cytoplasm" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2128096 AT4G31290 "AT4G31290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179714 AT5G26220 "AT5G26220" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050706-146 chac2 "ChaC, cation transport regulator homolog 2 (E. coli)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:1915294 Chac2 "ChaC, cation transport regulator 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q8WUX2 CHAC2 "Cation transport regulator-like protein 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0030411 CG2540 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1P0B7 CHAC1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0286727 DDB_G0286727 "chaC-like family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-1957 chac1 "ChaC, cation transport regulator-like 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8WUX2CHAC2_HUMANNo assigned EC number0.44190.92510.9402yesno
Q9CQG1CHAC2_MOUSENo assigned EC number0.46400.92510.9719yesno
Q0IIH4CHAC2_BOVINNo assigned EC number0.43640.86090.9147yesno
P87305CHAC_SCHPONo assigned EC number0.34690.94650.8719yesno
Q4KMJ1CHAC2_DANRENo assigned EC number0.47310.94650.9725yesno
Q641Z5CHAC2_RATNo assigned EC number0.46400.92510.9719yesno
Q5ZI66CHAC2_CHICKNo assigned EC number0.46920.90370.9086yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00015371001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (189 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query187
pfam04752178 pfam04752, ChaC, ChaC-like protein 2e-77
COG3703190 COG3703, ChaC, Uncharacterized protein involved in 6e-42
cd0666199 cd06661, GGCT_like, GGCT-like domains, also called 4e-11
>gnl|CDD|218243 pfam04752, ChaC, ChaC-like protein Back     alignment and domain information
 Score =  228 bits (584), Expect = 2e-77
 Identities = 92/183 (50%), Positives = 113/183 (61%), Gaps = 10/183 (5%)

Query: 1   MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVC 60
           +WVFGYGSLIWK GF +DE   GFIKGY R F QGSTDHRGTP+ PGR +TLE  E   C
Sbjct: 1   LWVFGYGSLIWKPGFEYDESRRGFIKGYHRRFCQGSTDHRGTPEQPGRVLTLEEGEEGRC 60

Query: 61  WGAAYKITKKEDKEVAVTYLEVREKQ--YDKKAYLDLFTDPMATT-PAVSGVMVYIASAN 117
           WG AY++  +E  E  + YL+VREK   Y+ +  +  +      T P V   +VY+A+  
Sbjct: 61  WGVAYRVPGEE-AEEVLEYLDVREKVNGYETE-SVPFYPRLDVGTEPVVLRALVYVAT-- 116

Query: 118 KQLNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKALLELGC--EDKHVIDLANTV 175
              N  YLGPA LE+IA QI  A GPSGPN +YLF L K L  LG    D H+ +L   V
Sbjct: 117 -PKNPQYLGPAPLEEIAAQIATAVGPSGPNAEYLFNLAKHLRALGPEIRDDHLEELEELV 175

Query: 176 RRI 178
           R+ 
Sbjct: 176 RKE 178


The ChaC protein is thought to be associated with the putative ChaA Ca2+/H+ cation transport protein in Escherichia coli. Its function is not known. This family also includes homologues regions from several other bacterial and eukaryotic proteins. Length = 178

>gnl|CDD|226226 COG3703, ChaC, Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|119400 cd06661, GGCT_like, GGCT-like domains, also called AIG2-like family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 187
PF04752178 ChaC: ChaC-like protein; InterPro: IPR006840 The C 100.0
KOG3182212 consensus Predicted cation transporter [Inorganic 100.0
COG3703190 ChaC Uncharacterized protein involved in cation tr 100.0
PHA03014163 hypothetical protein; Provisional 99.8
cd0666199 GGCT_like GGCT-like domains, also called AIG2-like 99.74
KOG4059193 consensus Uncharacterized conserved protein [Funct 99.35
PF1377283 AIG2_2: AIG2-like family; PDB: 2QIK_A 2RBH_B 2I5T_ 99.22
PF06094102 AIG2: AIG2-like family; InterPro: IPR009288 AIG2 i 99.14
COG2105120 Uncharacterized conserved protein [Function unknow 98.01
KOG4450168 consensus Uncharacterized conserved protein [Funct 93.39
>PF04752 ChaC: ChaC-like protein; InterPro: IPR006840 The ChaC protein is thought to be associated with the putative ChaA Ca2+/H+ cation transport protein in Escherichia coli Back     alignment and domain information
Probab=100.00  E-value=1.7e-67  Score=425.17  Aligned_cols=173  Identities=49%  Similarity=0.946  Sum_probs=162.5

Q ss_pred             CeEEEecccCCCCCCCCCeeeeEEEeCeEEEEEeccCCCCCCCCCCceeeEeeeCCCCcEEEEEEEeCCCCChHHHHHHH
Q 029821            1 MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVCWGAAYKITKKEDKEVAVTYL   80 (187)
Q Consensus         1 ~wvFgYGSL~w~~~~~~~~~~~a~l~G~~R~f~~~s~~~RGt~~~PG~vl~l~~~~~~~~~Gv~y~v~~~~~~~~~l~~L   80 (187)
                      |||||||||||||.|++.++++|+|+||+|+|||.|++|||||++||+|+||++++++.||||+|+|++ ++++++|++|
T Consensus         1 ~WVFGYGSLiW~p~f~~~e~~~a~i~Gy~R~F~~~s~~hRGTpe~PGrvltL~~~~~~~c~Gvayrv~~-~~~~~~l~~L   79 (178)
T PF04752_consen    1 LWVFGYGSLIWNPGFPYAERRPAYIKGYHRRFCQGSTDHRGTPEQPGRVLTLDPGEEGSCWGVAYRVPE-EDAEEVLEYL   79 (178)
T ss_pred             CEEEEeccceeCCCCCccceEEEEecCcccceEeeccccCCCcCCCcceeeeeeCCCCEEEEEEEEecC-cCHHHHHHHH
Confidence            799999999999999999999999999999999999999999999999999999888999999999997 8999999999


Q ss_pred             HHHhh-cCcccceEEEEeC-CCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCcHHHHHHHHHHH
Q 029821           81 EVREK-QYDKKAYLDLFTD-PMATTPAVSGVMVYIASANKQLNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKAL  158 (187)
Q Consensus        81 d~RE~-~~y~~~~v~v~~~-~~~~~~~~~~alvYva~~~~~~n~~~~g~~~~~~~a~~I~~a~G~sG~n~eYl~~l~~~L  158 (187)
                      |.||| ++|...++++++. +....+..+.|+|||++++   ||+|+|+++++++|++|++|+|+||+|.|||++|+++|
T Consensus        80 ~~RE~~~Gy~~~~v~~~~~~~~~~~~~~~~al~yv~~~~---n~~y~g~~~~~~~A~~Ia~a~G~~G~N~eYL~~l~~~L  156 (178)
T PF04752_consen   80 DEREMIGGYTRHWVPFYPEVDTDSGPVIVEALVYVADPD---NPQYLGPLPLEEIARIIATASGPSGSNREYLFNLAEAL  156 (178)
T ss_pred             hhcccccccceEEEEEEEeccCCCCceEEEEEEEEecCC---CccccCCCCHHHHHHHHhheECcCcCCHHHHHHHHHHH
Confidence            99999 6788889999872 2222343468999999999   99999999999999999999999999999999999999


Q ss_pred             HHcC--CCChhHHHHHHHHHh
Q 029821          159 LELG--CEDKHVIDLANTVRR  177 (187)
Q Consensus       159 ~~lg--i~D~~l~~L~~~v~~  177 (187)
                      +++|  |.|+||++|+++|++
T Consensus       157 ~~~gp~i~D~~l~~L~~~V~~  177 (178)
T PF04752_consen  157 RELGPGIRDPHLFALERRVRE  177 (178)
T ss_pred             HHhCCCCCChHHHHHHHHHhh
Confidence            9999  999999999999986



Its function is not known. This family also includes homologues regions from several other bacterial and eukaryotic proteins.

>KOG3182 consensus Predicted cation transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3703 ChaC Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism] Back     alignment and domain information
>PHA03014 hypothetical protein; Provisional Back     alignment and domain information
>cd06661 GGCT_like GGCT-like domains, also called AIG2-like family Back     alignment and domain information
>KOG4059 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF13772 AIG2_2: AIG2-like family; PDB: 2QIK_A 2RBH_B 2I5T_B 2Q53_A 2PN7_B 3CRY_A Back     alignment and domain information
>PF06094 AIG2: AIG2-like family; InterPro: IPR009288 AIG2 is an Arabidopsis protein that exhibit RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2 [] Back     alignment and domain information
>COG2105 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG4450 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query187
3cry_A188 Gamma-glutamyl cyclotransferase; enzyme, oxoprolin 1e-11
2qik_A285 UPF0131 protein YKQA; NESG, SR631, structural geno 3e-08
>3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A Length = 188 Back     alignment and structure
 Score = 59.8 bits (144), Expect = 1e-11
 Identities = 23/161 (14%), Positives = 49/161 (30%), Gaps = 20/161 (12%)

Query: 1   MWVFGYGSLIWKAGF-----HFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPA 55
              F YGS +                V  ++ ++  F   ++  + +  + G   T+  +
Sbjct: 17  FLYFAYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFG--NSQGKTSQTWHGGIATIFQS 74

Query: 56  EGEVCWGAAYKITKKEDKEVAVTYLEVREKQYDKKAYLDLFTDPMATTPAVSGVMVYIAS 115
            G+  WG  +K+ K          L+ ++       Y+ +                Y+  
Sbjct: 75  PGDEVWGVVWKMNKSNLN-----SLDEQQ-GVKSGMYVVIEVKVATQEGKEITCRSYLM- 127

Query: 116 ANKQLNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEK 156
                 +    P S     K I      +G   +Y  +L+ 
Sbjct: 128 -----TNYESAPPS-PQYKKIICMGAKENGLPLEYQEKLKA 162


>2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis} Length = 285 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query187
3cry_A188 Gamma-glutamyl cyclotransferase; enzyme, oxoprolin 99.95
2qik_A285 UPF0131 protein YKQA; NESG, SR631, structural geno 99.95
2jqv_A165 AT3G28950, AIG2 protein-like; structural genomics, 99.78
2g0q_A173 AT5G39720.1 protein; structural genomics, protein 99.72
1xhs_A121 Hypothetical UPF0131 protein YTFP; structure, auto 98.95
1v30_A124 Hypothetical UPF0131 protein PH0828; alpha+beta, s 98.87
3jud_A153 AIG2-like domain-containing protein 1; cyclotransf 98.87
1vkb_A161 Hypothetical protein; gamma-glutamyl cyclotransfer 98.62
2qik_A 285 UPF0131 protein YKQA; NESG, SR631, structural geno 98.11
3cry_A188 Gamma-glutamyl cyclotransferase; enzyme, oxoprolin 83.2
>3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A Back     alignment and structure
Probab=99.95  E-value=3.6e-29  Score=201.58  Aligned_cols=158  Identities=15%  Similarity=0.242  Sum_probs=124.6

Q ss_pred             CeEEEecccCCCCCCCC-----CeeeeEEEeCeEEEEEeccCCCCCCCCCCceeeEeeeCCCCcEEEEEEEeCCCCChHH
Q 029821            1 MWVFGYGSLIWKAGFHF-----DERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVCWGAAYKITKKEDKEV   75 (187)
Q Consensus         1 ~wvFgYGSL~w~~~~~~-----~~~~~a~l~G~~R~f~~~s~~~RGt~~~PG~vl~l~~~~~~~~~Gv~y~v~~~~~~~~   75 (187)
                      +|||+||||||++.|..     ....+|+|+||+|.|++.|.+|  ++..+|.+++|++++++.|||++|+|++     +
T Consensus        17 ~~~FaYGSlm~~~~~~~~~~~~~~~~~a~l~gy~l~f~~~~~~~--~~~~~g~~~~lv~~~g~~V~G~ly~v~~-----~   89 (188)
T 3cry_A           17 FLYFAYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFGNSQGKT--SQTWHGGIATIFQSPGDEVWGVVWKMNK-----S   89 (188)
T ss_dssp             EEEEECSGGGSHHHHHHHCTTCEEEEEEEEEEEEEEEEEETTCC--CTTTSSCEEEEEEEEEEEEEEEEEEEEG-----G
T ss_pred             EEEEEEccCCCHHHHHhhCCCCceEEEEEEcCEEEEECCCCCCC--cCCCCCeeEeEEeCCCCEEEEEEEEECH-----H
Confidence            59999999999988754     2568999999999999997776  5667789999999888999999999987     6


Q ss_pred             HHHHHHHHhhc---CcccceEEEEeCCCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCcHHHHH
Q 029821           76 AVTYLEVREKQ---YDKKAYLDLFTDPMATTPAVSGVMVYIASANKQLNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLF  152 (187)
Q Consensus        76 ~l~~Ld~RE~~---~y~~~~v~v~~~~~~~~~~~~~alvYva~~~~~~n~~~~g~~~~~~~a~~I~~a~G~sG~n~eYl~  152 (187)
                      .++.||+||+.   .|.+..++|.+.++.    .+.|+||++++.   ++    ..|.++.+.+|+++.+.+|.+.||+.
T Consensus        90 ~l~~LD~~Eg~~~g~Y~r~~v~V~~~~g~----~~~a~vYv~~~~---~~----~~ps~~Yl~~i~~g~~~~gl~~~y~~  158 (188)
T 3cry_A           90 NLNSLDEQQGVKSGMYVVIEVKVATQEGK----EITCRSYLMTNY---ES----APPSPQYKKIICMGAKENGLPLEYQE  158 (188)
T ss_dssp             GHHHHHHHTTGGGTSCEEEEEEEEETTCC----EEEEEEEECSSE---EE----CCCCHHHHHHHHHHHHHTTCCHHHHH
T ss_pred             HHHHHHHHhCCCCCcEEEEEEEEEeCCCC----EEEEEEEEecCC---CC----CCChHHHHHHHHHHHHHhCcCHHHHH
Confidence            79999999984   688888999887764    368999999876   43    34667788888888888888888877


Q ss_pred             HHHHHHHHcCCCChhHHHHHHHHHh
Q 029821          153 QLEKALLELGCEDKHVIDLANTVRR  177 (187)
Q Consensus       153 ~l~~~L~~lgi~D~~l~~L~~~v~~  177 (187)
                      +|.. +...|..-+.+.+|++.++.
T Consensus       159 ~L~~-~~~~g~~~p~~~~~~~~~~~  182 (188)
T 3cry_A          159 KLKA-IEPNDYTGKVSEEIEDIIKK  182 (188)
T ss_dssp             HHHT-CCCCCCCSCCCHHHHHHHHC
T ss_pred             HHhc-ccccCCCCCCcHHHHHHHHh
Confidence            6643 23335555566666665543



>2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis} Back     alignment and structure
>2jqv_A AT3G28950, AIG2 protein-like; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} Back     alignment and structure
>2g0q_A AT5G39720.1 protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} Back     alignment and structure
>1xhs_A Hypothetical UPF0131 protein YTFP; structure, autostructure, northeast structural genomics consortium, NESG, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.269.1.1 Back     alignment and structure
>1v30_A Hypothetical UPF0131 protein PH0828; alpha+beta, structural genomics, unknown function; HET: NHE; 1.40A {Pyrococcus horikoshii} SCOP: d.269.1.1 Back     alignment and structure
>3jud_A AIG2-like domain-containing protein 1; cyclotransferase, gamma-glutamylamine cyclotransferase, gamma-glutamyl-epsilon-lysine; 0.98A {Homo sapiens} SCOP: d.269.1.1 PDB: 3jub_A 3juc_A Back     alignment and structure
>1vkb_A Hypothetical protein; gamma-glutamyl cyclotransferase-like fold, structural genomi center for structural genomics, JCSG, protein structure INI PSI; 1.90A {Mus musculus} SCOP: d.269.1.1 PDB: 2kl2_A Back     alignment and structure
>2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis} Back     alignment and structure
>3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query187
d1vkba_151 Hypothetical protein LOC223267 {Mouse (Mus musculu 99.03
d1xhsa_113 Hypothetical protein YtfP {Escherichia coli [TaxId 98.84
d1v30a_118 Hypothetical protein PH0828 {Pyrococcus horikoshii 98.5
>d1vkba_ d.269.1.1 (A:) Hypothetical protein LOC223267 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Gamma-glutamyl cyclotransferase-like
superfamily: Gamma-glutamyl cyclotransferase-like
family: Gamma-glutamyl cyclotransferase-like
domain: Hypothetical protein LOC223267
species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.03  E-value=2.4e-10  Score=86.83  Aligned_cols=109  Identities=16%  Similarity=0.192  Sum_probs=67.4

Q ss_pred             eEEEecccCCCCCCCC----CeeeeEEEeCeEEEEEeccCCCCCCCCCCceeeEeeeCCCCcEEEEEEEeCCCCChHHHH
Q 029821            2 WVFGYGSLIWKAGFHF----DERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVCWGAAYKITKKEDKEVAV   77 (187)
Q Consensus         2 wvFgYGSL~w~~~~~~----~~~~~a~l~G~~R~f~~~s~~~RGt~~~PG~vl~l~~~~~~~~~Gv~y~v~~~~~~~~~l   77 (187)
                      .||.|||||.....+.    .....+...|..+.........-|....|+.+.  .++.+..|+|.+|.|++     +.|
T Consensus         5 ~lFvYGTL~~g~~n~~~l~~~~~~~a~~~g~~~t~~~~~l~~~g~~~yP~l~~--~~~~~~~V~G~l~~v~~-----~~l   77 (151)
T d1vkba_           5 HIFVYGTLKRGQPNHKVMLDHSHGLAAFRGRGCTVESFPLVIAGEHNIPWLLY--LPGKGHCVTGEIYEVDE-----QML   77 (151)
T ss_dssp             EEEECSTTSTTSTTTHHHHCGGGCCEEEEEEEEESSCBCEEEETTTTEEEEES--CTTSSBCCEEEEEEECH-----HHH
T ss_pred             EEEEEcCCCCCCcChHHHhccccCcceEEEEEEEccceeEEEeCCCCcCEEEe--eCCCCcEEEEEEEEcCH-----HHH
Confidence            4899999997554322    122334444444433221111123444565443  34455689999999986     899


Q ss_pred             HHHHHHhh--cCcccceEEEEeCCCC---CCCceeEEEEEEEecC
Q 029821           78 TYLEVREK--QYDKKAYLDLFTDPMA---TTPAVSGVMVYIASAN  117 (187)
Q Consensus        78 ~~Ld~RE~--~~y~~~~v~v~~~~~~---~~~~~~~alvYva~~~  117 (187)
                      +.||..|+  ..|++..++|...++.   .....+.|++|+.+..
T Consensus        78 ~~LD~~Eg~~~~Y~R~~v~V~l~~~~~~~~~g~~v~A~vY~~~~~  122 (151)
T d1vkba_          78 RFLDDFEDCPSMYQRTALQVQVLEWEGDGDPGDSVQCFVYTTATY  122 (151)
T ss_dssp             HHHHHHTTTTTSCEEEEEEEEEEEEC----CCSEEEEEEEEESCC
T ss_pred             HhhHHhcCCCCceEEEEEEEEeccccccCCCCCEEEEEEEECCCC
Confidence            99999998  4788888888753210   1112468999998765



>d1xhsa_ d.269.1.1 (A:) Hypothetical protein YtfP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v30a_ d.269.1.1 (A:) Hypothetical protein PH0828 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure