Citrus Sinensis ID: 029821
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 187 | ||||||
| 225459528 | 189 | PREDICTED: cation transport regulator-li | 0.978 | 0.968 | 0.786 | 1e-86 | |
| 351727757 | 185 | uncharacterized protein LOC100305985 [Gl | 0.973 | 0.983 | 0.818 | 4e-86 | |
| 388506294 | 185 | unknown [Lotus japonicus] | 0.973 | 0.983 | 0.796 | 4e-85 | |
| 224082274 | 182 | predicted protein [Populus trichocarpa] | 0.967 | 0.994 | 0.817 | 4e-85 | |
| 255545466 | 190 | Cation transport protein chaC, putative | 0.973 | 0.957 | 0.791 | 5e-84 | |
| 357438635 | 185 | Cation transport regulator-like protein | 0.973 | 0.983 | 0.780 | 9e-84 | |
| 217075360 | 221 | unknown [Medicago truncatula] | 0.957 | 0.809 | 0.776 | 2e-82 | |
| 449455246 | 190 | PREDICTED: cation transport regulator-li | 0.967 | 0.952 | 0.763 | 1e-79 | |
| 18401334 | 199 | cation transport protein ChaC [Arabidops | 0.978 | 0.919 | 0.754 | 1e-76 | |
| 12083292 | 197 | unknown protein [Arabidopsis thaliana] | 0.978 | 0.928 | 0.754 | 1e-76 |
| >gi|225459528|ref|XP_002285846.1| PREDICTED: cation transport regulator-like protein 2 [Vitis vinifera] gi|302141833|emb|CBI19036.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 144/183 (78%), Positives = 173/183 (94%)
Query: 1 MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVC 60
+WVFGYGSLIWKAGF +D+R V FIKGYRRVF+QGSTDHRGTP++PGRTVTLEPAEGE+C
Sbjct: 3 LWVFGYGSLIWKAGFEYDDRRVCFIKGYRRVFYQGSTDHRGTPEYPGRTVTLEPAEGEIC 62
Query: 61 WGAAYKITKKEDKEVAVTYLEVREKQYDKKAYLDLFTDPMATTPAVSGVMVYIASANKQL 120
WG AYK++K+ED+++A+TYLEVREKQYDKKAYLD++ +PMATTP +SGVMVYIAS +K+L
Sbjct: 63 WGVAYKVSKEEDEQIALTYLEVREKQYDKKAYLDVYAEPMATTPVISGVMVYIASPDKKL 122
Query: 121 NSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKALLELGCEDKHVIDLANTVRRILS 180
N NYLGPAS+E+IAKQII AEGPSGPNR+YLFQLE+ALL++GCEDKHV+DLAN VRRILS
Sbjct: 123 NRNYLGPASVEEIAKQIIHAEGPSGPNREYLFQLEQALLQMGCEDKHVMDLANEVRRILS 182
Query: 181 EED 183
E++
Sbjct: 183 EKE 185
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351727757|ref|NP_001235892.1| uncharacterized protein LOC100305985 [Glycine max] gi|255627195|gb|ACU13942.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|388506294|gb|AFK41213.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
| >gi|224082274|ref|XP_002306627.1| predicted protein [Populus trichocarpa] gi|222856076|gb|EEE93623.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255545466|ref|XP_002513793.1| Cation transport protein chaC, putative [Ricinus communis] gi|223546879|gb|EEF48376.1| Cation transport protein chaC, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|357438635|ref|XP_003589593.1| Cation transport regulator-like protein [Medicago truncatula] gi|355478641|gb|AES59844.1| Cation transport regulator-like protein [Medicago truncatula] gi|388508216|gb|AFK42174.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|217075360|gb|ACJ86040.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|449455246|ref|XP_004145364.1| PREDICTED: cation transport regulator-like protein 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|18401334|ref|NP_564490.1| cation transport protein ChaC [Arabidopsis thaliana] gi|29893538|gb|AAP06821.1| unknown protein [Arabidopsis thaliana] gi|110736693|dbj|BAF00310.1| hypothetical protein [Arabidopsis thaliana] gi|332193931|gb|AEE32052.1| cation transport protein ChaC [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|12083292|gb|AAG48805.1|AF332442_1 unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 187 | ||||||
| TAIR|locus:2194854 | 199 | AT1G44790 "AT1G44790" [Arabido | 0.978 | 0.919 | 0.754 | 6.7e-72 | |
| TAIR|locus:2128096 | 227 | AT4G31290 "AT4G31290" [Arabido | 0.983 | 0.810 | 0.535 | 4e-51 | |
| TAIR|locus:2179714 | 216 | AT5G26220 "AT5G26220" [Arabido | 0.957 | 0.828 | 0.516 | 1.8e-48 | |
| ZFIN|ZDB-GENE-050706-146 | 182 | chac2 "ChaC, cation transport | 0.946 | 0.972 | 0.473 | 1.7e-36 | |
| MGI|MGI:1915294 | 178 | Chac2 "ChaC, cation transport | 0.925 | 0.971 | 0.475 | 1.2e-35 | |
| UNIPROTKB|Q8WUX2 | 184 | CHAC2 "Cation transport regula | 0.919 | 0.934 | 0.461 | 9.5e-34 | |
| FB|FBgn0030411 | 311 | CG2540 [Drosophila melanogaste | 0.946 | 0.569 | 0.391 | 3.8e-30 | |
| UNIPROTKB|F1P0B7 | 224 | CHAC1 "Uncharacterized protein | 0.925 | 0.772 | 0.416 | 4.9e-30 | |
| DICTYBASE|DDB_G0286727 | 322 | DDB_G0286727 "chaC-like family | 0.935 | 0.543 | 0.388 | 9.1e-29 | |
| ZFIN|ZDB-GENE-030131-1957 | 196 | chac1 "ChaC, cation transport | 0.914 | 0.872 | 0.407 | 5e-28 |
| TAIR|locus:2194854 AT1G44790 "AT1G44790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 138/183 (75%), Positives = 155/183 (84%)
Query: 1 MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVC 60
MWVFGYGSLIWK GF FDE + GFIKGYRRVFHQGSTDHRGTP FPGRTVTLE A EVC
Sbjct: 3 MWVFGYGSLIWKTGFPFDESLPGFIKGYRRVFHQGSTDHRGTPDFPGRTVTLEAAHEEVC 62
Query: 61 WGAAYKITKKEDKEVAVTYLEVREKQYDKKAYLDLFTDPMATTPAVSGVMVYIASANKQL 120
G AYKITK+EDK A+ +LEVREKQYD+K YLD FTD A+ PAV+GVMVYIAS +K+
Sbjct: 63 CGVAYKITKEEDKRDALLHLEVREKQYDQKEYLDFFTDSNASEPAVAGVMVYIASPDKKS 122
Query: 121 NSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKALLELGCEDKHVIDLANTVRRILS 180
N+NYLGPA LEDIAKQI++A+GPSGPNRDYLF LE+AL +LG +DKHV DLAN VR ILS
Sbjct: 123 NNNYLGPAPLEDIAKQIVKAKGPSGPNRDYLFNLEEALAQLGFKDKHVTDLANQVRHILS 182
Query: 181 EED 183
E +
Sbjct: 183 ESE 185
|
|
| TAIR|locus:2128096 AT4G31290 "AT4G31290" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2179714 AT5G26220 "AT5G26220" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050706-146 chac2 "ChaC, cation transport regulator homolog 2 (E. coli)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1915294 Chac2 "ChaC, cation transport regulator 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8WUX2 CHAC2 "Cation transport regulator-like protein 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0030411 CG2540 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P0B7 CHAC1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0286727 DDB_G0286727 "chaC-like family protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030131-1957 chac1 "ChaC, cation transport regulator-like 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00015371001 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (189 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 187 | |||
| pfam04752 | 178 | pfam04752, ChaC, ChaC-like protein | 2e-77 | |
| COG3703 | 190 | COG3703, ChaC, Uncharacterized protein involved in | 6e-42 | |
| cd06661 | 99 | cd06661, GGCT_like, GGCT-like domains, also called | 4e-11 |
| >gnl|CDD|218243 pfam04752, ChaC, ChaC-like protein | Back alignment and domain information |
|---|
Score = 228 bits (584), Expect = 2e-77
Identities = 92/183 (50%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 1 MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVC 60
+WVFGYGSLIWK GF +DE GFIKGY R F QGSTDHRGTP+ PGR +TLE E C
Sbjct: 1 LWVFGYGSLIWKPGFEYDESRRGFIKGYHRRFCQGSTDHRGTPEQPGRVLTLEEGEEGRC 60
Query: 61 WGAAYKITKKEDKEVAVTYLEVREKQ--YDKKAYLDLFTDPMATT-PAVSGVMVYIASAN 117
WG AY++ +E E + YL+VREK Y+ + + + T P V +VY+A+
Sbjct: 61 WGVAYRVPGEE-AEEVLEYLDVREKVNGYETE-SVPFYPRLDVGTEPVVLRALVYVAT-- 116
Query: 118 KQLNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKALLELGC--EDKHVIDLANTV 175
N YLGPA LE+IA QI A GPSGPN +YLF L K L LG D H+ +L V
Sbjct: 117 -PKNPQYLGPAPLEEIAAQIATAVGPSGPNAEYLFNLAKHLRALGPEIRDDHLEELEELV 175
Query: 176 RRI 178
R+
Sbjct: 176 RKE 178
|
The ChaC protein is thought to be associated with the putative ChaA Ca2+/H+ cation transport protein in Escherichia coli. Its function is not known. This family also includes homologues regions from several other bacterial and eukaryotic proteins. Length = 178 |
| >gnl|CDD|226226 COG3703, ChaC, Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|119400 cd06661, GGCT_like, GGCT-like domains, also called AIG2-like family | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 187 | |||
| PF04752 | 178 | ChaC: ChaC-like protein; InterPro: IPR006840 The C | 100.0 | |
| KOG3182 | 212 | consensus Predicted cation transporter [Inorganic | 100.0 | |
| COG3703 | 190 | ChaC Uncharacterized protein involved in cation tr | 100.0 | |
| PHA03014 | 163 | hypothetical protein; Provisional | 99.8 | |
| cd06661 | 99 | GGCT_like GGCT-like domains, also called AIG2-like | 99.74 | |
| KOG4059 | 193 | consensus Uncharacterized conserved protein [Funct | 99.35 | |
| PF13772 | 83 | AIG2_2: AIG2-like family; PDB: 2QIK_A 2RBH_B 2I5T_ | 99.22 | |
| PF06094 | 102 | AIG2: AIG2-like family; InterPro: IPR009288 AIG2 i | 99.14 | |
| COG2105 | 120 | Uncharacterized conserved protein [Function unknow | 98.01 | |
| KOG4450 | 168 | consensus Uncharacterized conserved protein [Funct | 93.39 |
| >PF04752 ChaC: ChaC-like protein; InterPro: IPR006840 The ChaC protein is thought to be associated with the putative ChaA Ca2+/H+ cation transport protein in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-67 Score=425.17 Aligned_cols=173 Identities=49% Similarity=0.946 Sum_probs=162.5
Q ss_pred CeEEEecccCCCCCCCCCeeeeEEEeCeEEEEEeccCCCCCCCCCCceeeEeeeCCCCcEEEEEEEeCCCCChHHHHHHH
Q 029821 1 MWVFGYGSLIWKAGFHFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVCWGAAYKITKKEDKEVAVTYL 80 (187)
Q Consensus 1 ~wvFgYGSL~w~~~~~~~~~~~a~l~G~~R~f~~~s~~~RGt~~~PG~vl~l~~~~~~~~~Gv~y~v~~~~~~~~~l~~L 80 (187)
|||||||||||||.|++.++++|+|+||+|+|||.|++|||||++||+|+||++++++.||||+|+|++ ++++++|++|
T Consensus 1 ~WVFGYGSLiW~p~f~~~e~~~a~i~Gy~R~F~~~s~~hRGTpe~PGrvltL~~~~~~~c~Gvayrv~~-~~~~~~l~~L 79 (178)
T PF04752_consen 1 LWVFGYGSLIWNPGFPYAERRPAYIKGYHRRFCQGSTDHRGTPEQPGRVLTLDPGEEGSCWGVAYRVPE-EDAEEVLEYL 79 (178)
T ss_pred CEEEEeccceeCCCCCccceEEEEecCcccceEeeccccCCCcCCCcceeeeeeCCCCEEEEEEEEecC-cCHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999888999999999997 8999999999
Q ss_pred HHHhh-cCcccceEEEEeC-CCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCcHHHHHHHHHHH
Q 029821 81 EVREK-QYDKKAYLDLFTD-PMATTPAVSGVMVYIASANKQLNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEKAL 158 (187)
Q Consensus 81 d~RE~-~~y~~~~v~v~~~-~~~~~~~~~~alvYva~~~~~~n~~~~g~~~~~~~a~~I~~a~G~sG~n~eYl~~l~~~L 158 (187)
|.||| ++|...++++++. +....+..+.|+|||++++ ||+|+|+++++++|++|++|+|+||+|.|||++|+++|
T Consensus 80 ~~RE~~~Gy~~~~v~~~~~~~~~~~~~~~~al~yv~~~~---n~~y~g~~~~~~~A~~Ia~a~G~~G~N~eYL~~l~~~L 156 (178)
T PF04752_consen 80 DEREMIGGYTRHWVPFYPEVDTDSGPVIVEALVYVADPD---NPQYLGPLPLEEIARIIATASGPSGSNREYLFNLAEAL 156 (178)
T ss_pred hhcccccccceEEEEEEEeccCCCCceEEEEEEEEecCC---CccccCCCCHHHHHHHHhheECcCcCCHHHHHHHHHHH
Confidence 99999 6788889999872 2222343468999999999 99999999999999999999999999999999999999
Q ss_pred HHcC--CCChhHHHHHHHHHh
Q 029821 159 LELG--CEDKHVIDLANTVRR 177 (187)
Q Consensus 159 ~~lg--i~D~~l~~L~~~v~~ 177 (187)
+++| |.|+||++|+++|++
T Consensus 157 ~~~gp~i~D~~l~~L~~~V~~ 177 (178)
T PF04752_consen 157 RELGPGIRDPHLFALERRVRE 177 (178)
T ss_pred HHhCCCCCChHHHHHHHHHhh
Confidence 9999 999999999999986
|
Its function is not known. This family also includes homologues regions from several other bacterial and eukaryotic proteins. |
| >KOG3182 consensus Predicted cation transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG3703 ChaC Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PHA03014 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd06661 GGCT_like GGCT-like domains, also called AIG2-like family | Back alignment and domain information |
|---|
| >KOG4059 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF13772 AIG2_2: AIG2-like family; PDB: 2QIK_A 2RBH_B 2I5T_B 2Q53_A 2PN7_B 3CRY_A | Back alignment and domain information |
|---|
| >PF06094 AIG2: AIG2-like family; InterPro: IPR009288 AIG2 is an Arabidopsis protein that exhibit RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2 [] | Back alignment and domain information |
|---|
| >COG2105 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG4450 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 187 | |||
| 3cry_A | 188 | Gamma-glutamyl cyclotransferase; enzyme, oxoprolin | 1e-11 | |
| 2qik_A | 285 | UPF0131 protein YKQA; NESG, SR631, structural geno | 3e-08 |
| >3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A Length = 188 | Back alignment and structure |
|---|
Score = 59.8 bits (144), Expect = 1e-11
Identities = 23/161 (14%), Positives = 49/161 (30%), Gaps = 20/161 (12%)
Query: 1 MWVFGYGSLIWKAGF-----HFDERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPA 55
F YGS + V ++ ++ F ++ + + + G T+ +
Sbjct: 17 FLYFAYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFG--NSQGKTSQTWHGGIATIFQS 74
Query: 56 EGEVCWGAAYKITKKEDKEVAVTYLEVREKQYDKKAYLDLFTDPMATTPAVSGVMVYIAS 115
G+ WG +K+ K L+ ++ Y+ + Y+
Sbjct: 75 PGDEVWGVVWKMNKSNLN-----SLDEQQ-GVKSGMYVVIEVKVATQEGKEITCRSYLM- 127
Query: 116 ANKQLNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLFQLEK 156
+ P S K I +G +Y +L+
Sbjct: 128 -----TNYESAPPS-PQYKKIICMGAKENGLPLEYQEKLKA 162
|
| >2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis} Length = 285 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 187 | |||
| 3cry_A | 188 | Gamma-glutamyl cyclotransferase; enzyme, oxoprolin | 99.95 | |
| 2qik_A | 285 | UPF0131 protein YKQA; NESG, SR631, structural geno | 99.95 | |
| 2jqv_A | 165 | AT3G28950, AIG2 protein-like; structural genomics, | 99.78 | |
| 2g0q_A | 173 | AT5G39720.1 protein; structural genomics, protein | 99.72 | |
| 1xhs_A | 121 | Hypothetical UPF0131 protein YTFP; structure, auto | 98.95 | |
| 1v30_A | 124 | Hypothetical UPF0131 protein PH0828; alpha+beta, s | 98.87 | |
| 3jud_A | 153 | AIG2-like domain-containing protein 1; cyclotransf | 98.87 | |
| 1vkb_A | 161 | Hypothetical protein; gamma-glutamyl cyclotransfer | 98.62 | |
| 2qik_A | 285 | UPF0131 protein YKQA; NESG, SR631, structural geno | 98.11 | |
| 3cry_A | 188 | Gamma-glutamyl cyclotransferase; enzyme, oxoprolin | 83.2 |
| >3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-29 Score=201.58 Aligned_cols=158 Identities=15% Similarity=0.242 Sum_probs=124.6
Q ss_pred CeEEEecccCCCCCCCC-----CeeeeEEEeCeEEEEEeccCCCCCCCCCCceeeEeeeCCCCcEEEEEEEeCCCCChHH
Q 029821 1 MWVFGYGSLIWKAGFHF-----DERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVCWGAAYKITKKEDKEV 75 (187)
Q Consensus 1 ~wvFgYGSL~w~~~~~~-----~~~~~a~l~G~~R~f~~~s~~~RGt~~~PG~vl~l~~~~~~~~~Gv~y~v~~~~~~~~ 75 (187)
+|||+||||||++.|.. ....+|+|+||+|.|++.|.+| ++..+|.+++|++++++.|||++|+|++ +
T Consensus 17 ~~~FaYGSlm~~~~~~~~~~~~~~~~~a~l~gy~l~f~~~~~~~--~~~~~g~~~~lv~~~g~~V~G~ly~v~~-----~ 89 (188)
T 3cry_A 17 FLYFAYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFGNSQGKT--SQTWHGGIATIFQSPGDEVWGVVWKMNK-----S 89 (188)
T ss_dssp EEEEECSGGGSHHHHHHHCTTCEEEEEEEEEEEEEEEEEETTCC--CTTTSSCEEEEEEEEEEEEEEEEEEEEG-----G
T ss_pred EEEEEEccCCCHHHHHhhCCCCceEEEEEEcCEEEEECCCCCCC--cCCCCCeeEeEEeCCCCEEEEEEEEECH-----H
Confidence 59999999999988754 2568999999999999997776 5667789999999888999999999987 6
Q ss_pred HHHHHHHHhhc---CcccceEEEEeCCCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCcHHHHH
Q 029821 76 AVTYLEVREKQ---YDKKAYLDLFTDPMATTPAVSGVMVYIASANKQLNSNYLGPASLEDIAKQIIQAEGPSGPNRDYLF 152 (187)
Q Consensus 76 ~l~~Ld~RE~~---~y~~~~v~v~~~~~~~~~~~~~alvYva~~~~~~n~~~~g~~~~~~~a~~I~~a~G~sG~n~eYl~ 152 (187)
.++.||+||+. .|.+..++|.+.++. .+.|+||++++. ++ ..|.++.+.+|+++.+.+|.+.||+.
T Consensus 90 ~l~~LD~~Eg~~~g~Y~r~~v~V~~~~g~----~~~a~vYv~~~~---~~----~~ps~~Yl~~i~~g~~~~gl~~~y~~ 158 (188)
T 3cry_A 90 NLNSLDEQQGVKSGMYVVIEVKVATQEGK----EITCRSYLMTNY---ES----APPSPQYKKIICMGAKENGLPLEYQE 158 (188)
T ss_dssp GHHHHHHHTTGGGTSCEEEEEEEEETTCC----EEEEEEEECSSE---EE----CCCCHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHhCCCCCcEEEEEEEEEeCCCC----EEEEEEEEecCC---CC----CCChHHHHHHHHHHHHHhCcCHHHHH
Confidence 79999999984 688888999887764 368999999876 43 34667788888888888888888877
Q ss_pred HHHHHHHHcCCCChhHHHHHHHHHh
Q 029821 153 QLEKALLELGCEDKHVIDLANTVRR 177 (187)
Q Consensus 153 ~l~~~L~~lgi~D~~l~~L~~~v~~ 177 (187)
+|.. +...|..-+.+.+|++.++.
T Consensus 159 ~L~~-~~~~g~~~p~~~~~~~~~~~ 182 (188)
T 3cry_A 159 KLKA-IEPNDYTGKVSEEIEDIIKK 182 (188)
T ss_dssp HHHT-CCCCCCCSCCCHHHHHHHHC
T ss_pred HHhc-ccccCCCCCCcHHHHHHHHh
Confidence 6643 23335555566666665543
|
| >2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis} | Back alignment and structure |
|---|
| >2jqv_A AT3G28950, AIG2 protein-like; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >2g0q_A AT5G39720.1 protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} | Back alignment and structure |
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| >1xhs_A Hypothetical UPF0131 protein YTFP; structure, autostructure, northeast structural genomics consortium, NESG, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.269.1.1 | Back alignment and structure |
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| >1v30_A Hypothetical UPF0131 protein PH0828; alpha+beta, structural genomics, unknown function; HET: NHE; 1.40A {Pyrococcus horikoshii} SCOP: d.269.1.1 | Back alignment and structure |
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| >3jud_A AIG2-like domain-containing protein 1; cyclotransferase, gamma-glutamylamine cyclotransferase, gamma-glutamyl-epsilon-lysine; 0.98A {Homo sapiens} SCOP: d.269.1.1 PDB: 3jub_A 3juc_A | Back alignment and structure |
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| >1vkb_A Hypothetical protein; gamma-glutamyl cyclotransferase-like fold, structural genomi center for structural genomics, JCSG, protein structure INI PSI; 1.90A {Mus musculus} SCOP: d.269.1.1 PDB: 2kl2_A | Back alignment and structure |
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| >2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis} | Back alignment and structure |
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| >3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A | Back alignment and structure |
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Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 187 | |||
| d1vkba_ | 151 | Hypothetical protein LOC223267 {Mouse (Mus musculu | 99.03 | |
| d1xhsa_ | 113 | Hypothetical protein YtfP {Escherichia coli [TaxId | 98.84 | |
| d1v30a_ | 118 | Hypothetical protein PH0828 {Pyrococcus horikoshii | 98.5 |
| >d1vkba_ d.269.1.1 (A:) Hypothetical protein LOC223267 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a+b) fold: Gamma-glutamyl cyclotransferase-like superfamily: Gamma-glutamyl cyclotransferase-like family: Gamma-glutamyl cyclotransferase-like domain: Hypothetical protein LOC223267 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.03 E-value=2.4e-10 Score=86.83 Aligned_cols=109 Identities=16% Similarity=0.192 Sum_probs=67.4
Q ss_pred eEEEecccCCCCCCCC----CeeeeEEEeCeEEEEEeccCCCCCCCCCCceeeEeeeCCCCcEEEEEEEeCCCCChHHHH
Q 029821 2 WVFGYGSLIWKAGFHF----DERVVGFIKGYRRVFHQGSTDHRGTPKFPGRTVTLEPAEGEVCWGAAYKITKKEDKEVAV 77 (187)
Q Consensus 2 wvFgYGSL~w~~~~~~----~~~~~a~l~G~~R~f~~~s~~~RGt~~~PG~vl~l~~~~~~~~~Gv~y~v~~~~~~~~~l 77 (187)
.||.|||||.....+. .....+...|..+.........-|....|+.+. .++.+..|+|.+|.|++ +.|
T Consensus 5 ~lFvYGTL~~g~~n~~~l~~~~~~~a~~~g~~~t~~~~~l~~~g~~~yP~l~~--~~~~~~~V~G~l~~v~~-----~~l 77 (151)
T d1vkba_ 5 HIFVYGTLKRGQPNHKVMLDHSHGLAAFRGRGCTVESFPLVIAGEHNIPWLLY--LPGKGHCVTGEIYEVDE-----QML 77 (151)
T ss_dssp EEEECSTTSTTSTTTHHHHCGGGCCEEEEEEEEESSCBCEEEETTTTEEEEES--CTTSSBCCEEEEEEECH-----HHH
T ss_pred EEEEEcCCCCCCcChHHHhccccCcceEEEEEEEccceeEEEeCCCCcCEEEe--eCCCCcEEEEEEEEcCH-----HHH
Confidence 4899999997554322 122334444444433221111123444565443 34455689999999986 899
Q ss_pred HHHHHHhh--cCcccceEEEEeCCCC---CCCceeEEEEEEEecC
Q 029821 78 TYLEVREK--QYDKKAYLDLFTDPMA---TTPAVSGVMVYIASAN 117 (187)
Q Consensus 78 ~~Ld~RE~--~~y~~~~v~v~~~~~~---~~~~~~~alvYva~~~ 117 (187)
+.||..|+ ..|++..++|...++. .....+.|++|+.+..
T Consensus 78 ~~LD~~Eg~~~~Y~R~~v~V~l~~~~~~~~~g~~v~A~vY~~~~~ 122 (151)
T d1vkba_ 78 RFLDDFEDCPSMYQRTALQVQVLEWEGDGDPGDSVQCFVYTTATY 122 (151)
T ss_dssp HHHHHHTTTTTSCEEEEEEEEEEEEC----CCSEEEEEEEEESCC
T ss_pred HhhHHhcCCCCceEEEEEEEEeccccccCCCCCEEEEEEEECCCC
Confidence 99999998 4788888888753210 1112468999998765
|
| >d1xhsa_ d.269.1.1 (A:) Hypothetical protein YtfP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1v30a_ d.269.1.1 (A:) Hypothetical protein PH0828 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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