Citrus Sinensis ID: 029946

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-----
Protein Sequence
MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDSKSKSE
Secondary Structure (PSIPRED)
cEEEEEEccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccEEEEHHHHHHHHHHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccccccHHHHccHHHEccccccHccEEEEEHHHHHHHHHHHHHHHHHccccHHHHcccccccc
Coil and Loop (DISEMBL)
MFLFAFLgkvtkggaynpltvlasgisgdfsnflftvgaripaqvigsiTGVRfildtfpqigrgpslnvgihhgaLTEGLLTFAIVTISLGLarkipgsfyMKTWISSVSKLALHIlgsdmtggcmnpasVMGWAYargdhitkEHILVYWLAPIQATVIALWLFKLVVrplaeekkdskskse
Flexible Loop (DISEMBL)
MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRplaeekkdskskse
Low Complexity Region (SEG)
MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAeekkdskskse
Disordered region (IsUnstruct)
*FLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP*************
Disordered Region (DISOPRED)
MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVV***************
Disordered Region (DISEMBL)
MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPL************
Disordered Region (DISPRO)
MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAE**********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHoooRRRRRRRRRRRRRRRooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDSKSKSE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	185	2.2.26 [Sep-21-2011]
Q9M1K3	237	Probable aquaporin SIP2-1	yes	no	1.0	0.780	0.681	6e-75
Q9ATM1	249	Aquaporin SIP2-1 OS=Zea m	N/A	no	1.0	0.742	0.536	4e-52
Q10M80	250	Aquaporin SIP2-1 OS=Oryza	yes	no	1.0	0.74	0.523	5e-52
Q5VR89	246	Aquaporin SIP1-1 OS=Oryza	no	no	0.913	0.686	0.363	2e-20
Q9ATM2	243	Aquaporin SIP1-2 OS=Zea m	N/A	no	0.902	0.687	0.374	4e-20
Q9ATM3	245	Aquaporin SIP1-1 OS=Zea m	N/A	no	0.913	0.689	0.375	4e-20
Q9FK43	243	Probable aquaporin SIP1-2	no	no	0.956	0.728	0.315	4e-18
Q9M8W5	240	Aquaporin SIP1-1 OS=Arabi	no	no	0.902	0.695	0.331	8e-15
P08995	271	Nodulin-26 OS=Glycine max	no	no	0.848	0.579	0.288	4e-06
Q7PWV1	250	Aquaporin AQPAn.G OS=Anop	yes	no	0.702	0.52	0.276	0.0001

>sp|Q9M1K3|SIP21_ARATH Probable aquaporin SIP2-1 OS=Arabidopsis thaliana GN=SIP2-1 PE=2 SV=1

 Score =  280 bits (715), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 126/185 (68%), Positives = 159/185 (85%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP 60
           MF+FA+L + TKGG YNPLT LA+G+SG FS+F+F+V  RIP +VIGSI  V+ I+  FP
Sbjct: 53  MFIFAYLQQATKGGLYNPLTALAAGVSGGFSSFIFSVFVRIPVEVIGSILAVKHIIHVFP 112

Query: 61  QIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGS 120
           +IG+GP LNV IHHGALTEG+LTF IV +S+GL RKIPGSF+MKTWI S++KL LHILGS
Sbjct: 113 EIGKGPKLNVAIHHGALTEGILTFFIVLLSMGLTRKIPGSFFMKTWIGSLAKLTLHILGS 172

Query: 121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDS 180
           D+TGGCMNPA+VMGWAYARG+HITKEH+LVYWL P++AT++A+W FK+V +PL EE++  
Sbjct: 173 DLTGGCMNPAAVMGWAYARGEHITKEHLLVYWLGPVKATLLAVWFFKVVFKPLTEEQEKP 232

Query: 181 KSKSE 185
           K+KSE
Sbjct: 233 KAKSE 237

Water channel required to facilitate the transport of water across cell membrane. Inactive in yeast cells.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9ATM1|SIP21_MAIZE Aquaporin SIP2-1 OS=Zea mays GN=SIP2-1 PE=2 SV=1

 Score =  204 bits (518), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 102/190 (53%), Positives = 136/190 (71%), Gaps = 5/190 (2%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGIS--GDFSNFLFTVGARIPAQVIGSITGVRFILDT 58
           MFLFA+L   + G +YNPLTVLA+ ++  G  + +LFT  ARIPAQVIG++ GV+ I  T
Sbjct: 60  MFLFAWLEAASGGASYNPLTVLAAALASHGGPAVYLFTAFARIPAQVIGAVLGVKLIQVT 119

Query: 59  FPQIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHIL 118
           FP +G+G  L+VG HHGAL EGL TF +V +S+ L +K   SF+MKTWI+S+ K  +H+L
Sbjct: 120 FPNVGKGARLSVGAHHGALAEGLATFMVVMVSVTLKKKEMKSFFMKTWITSIWKNTIHLL 179

Query: 119 GSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP--LAEE 176
            SD+TGG MNPAS   WAYARGDH T +H+LVYWLAP+QAT++ +W      +P  + E+
Sbjct: 180 SSDITGGIMNPASAFAWAYARGDHTTFDHLLVYWLAPLQATLLGVWAVTFFTKPKKIKEQ 239

Query: 177 KKD-SKSKSE 185
           K D +K K E
Sbjct: 240 KVDENKIKKE 249

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Zea mays (taxid: 4577)

>sp|Q10M80|SIP21_ORYSJ Aquaporin SIP2-1 OS=Oryza sativa subsp. japonica GN=SIP2-1 PE=2 SV=1

 Score =  203 bits (517), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 99/189 (52%), Positives = 132/189 (69%), Gaps = 4/189 (2%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDF--SNFLFTVGARIPAQVIGSITGVRFILDT 58
           MF FA+L   T G +YNPLTVLA  ++     S +LF    R+PAQV GSI GV+ I   
Sbjct: 62  MFFFAWLEGFTGGASYNPLTVLAGALASRAGPSLYLFAAFVRMPAQVFGSILGVKLIRAA 121

Query: 59  FPQIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHIL 118
            P++G+G  L+VG+HHGAL EGL TF +V +S+ L +K    F+MKTWISS+ K+  H+L
Sbjct: 122 LPKVGKGAPLSVGVHHGALAEGLATFMVVIVSVTLKKKEMKGFFMKTWISSIWKMTFHLL 181

Query: 119 GSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP--LAEE 176
            SD+TGG MNPAS   WAYARGDH T +H+LVYWLAP+QAT++ +W+  L+ +P  + EE
Sbjct: 182 SSDITGGVMNPASAFAWAYARGDHTTFDHLLVYWLAPLQATLLGVWVVTLLTKPKKIEEE 241

Query: 177 KKDSKSKSE 185
             +SK+K E
Sbjct: 242 ADESKTKKE 250

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q5VR89|SIP11_ORYSJ Aquaporin SIP1-1 OS=Oryza sativa subsp. japonica GN=SIP1-1 PE=2 SV=2

 Score = 98.6 bits (244), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 92/176 (52%), Gaps = 7/176 (3%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLA---SGISGDFSNFLFTVGARIPAQVIGSITGVRFILD 57
           +F F  L     G ++NP  + A   +G+S    + LF +  R PAQ  G++ G   I +
Sbjct: 58  LFAFNLLCDALGGASFNPTALAAFHAAGLSSPRHSSLFPLALRFPAQAAGAVGGAMAISE 117

Query: 58  TFPQIGR----GPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKL 113
             P+  +    GPSL V +H GA  E +LTF I    L +  K P +  +KTW+ S+S +
Sbjct: 118 LMPEQYKHMLGGPSLKVDLHTGAAAELVLTFVITLAVLWIIVKGPRNPIVKTWMLSISTV 177

Query: 114 ALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLV 169
            L + G+  TG  MNPA+  GWAY    H T E   VYW+ P    V+A W+F+ V
Sbjct: 178 CLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAWVFRAV 233

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9ATM2|SIP12_MAIZE Aquaporin SIP1-2 OS=Zea mays GN=SIP1-2 PE=2 SV=1

 Score = 97.8 bits (242), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 89/171 (52%), Gaps = 4/171 (2%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP 60
           +F+F  L     G ++NP  V A   +G  S  LF++  R+PAQ  G++ G   I +  P
Sbjct: 58  LFVFNILCDALGGASFNPTGVAAFYAAGVTSPSLFSIALRLPAQAAGAVGGALAISELMP 117

Query: 61  QIGR----GPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALH 116
              R    GPSL V  H GA  E +LTF I    L +  K P +  +KTW+ S+  L L 
Sbjct: 118 AQYRHMLGGPSLKVDPHTGAGAELVLTFVITLAVLLIIVKGPRNPIIKTWMISICTLCLV 177

Query: 117 ILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFK 167
           + G+  TG  MNPA+  GWAY    H T E   VYW+ P    ++A W+F+
Sbjct: 178 LSGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFIGAILAAWIFR 228

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Zea mays (taxid: 4577)

>sp|Q9ATM3|SIP11_MAIZE Aquaporin SIP1-1 OS=Zea mays GN=SIP1-1 PE=2 SV=1

 Score = 97.8 bits (242), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 93/173 (53%), Gaps = 4/173 (2%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP 60
           +F F  L     G ++NP    AS  +G  S  LF+V  R PAQ  G++ G   I +  P
Sbjct: 60  LFTFDLLCGALGGASFNPTDFAASYAAGLDSPSLFSVALRFPAQAAGAVGGALAISELMP 119

Query: 61  QIGR----GPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALH 116
              +    GPSL V  H GAL EG+LTF I    L +  K P +  +KT + S S +++ 
Sbjct: 120 AQYKHTLAGPSLKVDPHTGALAEGVLTFVITLTVLWVIVKGPRNVILKTLLLSTSIVSVI 179

Query: 117 ILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLV 169
           + G++ TG  MNPA+  GWAY    H T E + VYW+ P    ++A W+F++V
Sbjct: 180 LAGAEYTGPSMNPANAFGWAYVNNWHNTWEQLYVYWICPFIGAMLAGWIFRVV 232

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.

Zea mays (taxid: 4577)

>sp|Q9FK43|SIP12_ARATH Probable aquaporin SIP1-2 OS=Arabidopsis thaliana GN=SIP1-2 PE=2 SV=1

 Score = 90.9 bits (224), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 102/184 (55%), Gaps = 7/184 (3%)

Query: 3   LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQ- 61
           +F  +G V  G ++NP    A   +G  S+ LF++  R PAQ IG+  G   I++  P+ 
Sbjct: 58  IFTVIGNVLGGASFNPCGNAAFYTAGVSSDSLFSLAIRSPAQAIGAAGGAITIMEMIPEK 117

Query: 62  ----IGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHI 117
               IG  PSL  G H+GA++E +L+F++  + L +  + P     KT++ +++ +++ +
Sbjct: 118 YKTRIGGKPSLQFGAHNGAISEVVLSFSVTFLVLLIILRGPRKLLAKTFLLALATVSVFV 177

Query: 118 LGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLV--VRPLAE 175
           +GS  T   MNPA   GWAY    H T +H  VYW++     +++  LF+++    PL +
Sbjct: 178 VGSKFTRPFMNPAIAFGWAYIYKSHNTWDHFYVYWISSYTGAILSAMLFRIIFPAPPLVQ 237

Query: 176 EKKD 179
           +K+ 
Sbjct: 238 KKQK 241

Water channel required to facilitate the transport of water across cell membrane.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M8W5|SIP11_ARATH Aquaporin SIP1-1 OS=Arabidopsis thaliana GN=SIP1-1 PE=2 SV=1

 Score = 80.1 bits (196), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 1   MFLFAFLGKVTKGGA-YNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITG----VRFI 55
           +F++  +  V  G A +NP    A  ++G   + LF++  R+PAQ IG+  G    + FI
Sbjct: 53  IFVYVSIFTVIFGSASFNPTGSAAFYVAGVPGDTLFSLAIRLPAQAIGAAGGALAIMEFI 112

Query: 56  LDTFPQIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLAL 115
            + +  +  GPSL V +H GA+ E +L+F I    L +  + P     KT++ +++ ++ 
Sbjct: 113 PEKYKHMIGGPSLQVDVHTGAIAETILSFGITFAVLLIILRGPRRLLAKTFLLALATISF 172

Query: 116 HILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFK 167
            + GS  TG  MNPA   GWAY    H T +HI VYW++     + A  LF+
Sbjct: 173 VVAGSKYTGPAMNPAIAFGWAYMYSSHNTWDHIYVYWISSFVGALSAALLFR 224

Water channel required to facilitate the transport of water across cell membrane.

Arabidopsis thaliana (taxid: 3702)

>sp|P08995|NO26_SOYBN Nodulin-26 OS=Glycine max PE=1 SV=2

 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 27/184 (14%)

Query: 12  KGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITG---VRFIL----DTFP-QIG 63
            GG +NP   +A   +  F   L  V A + AQ++GSI     +R +     D F   + 
Sbjct: 92  SGGHFNPAVTIAFASTRRFP--LIQVPAYVVAQLLGSILASGTLRLLFMGNHDQFSGTVP 149

Query: 64  RGPSLNVGIHHGALTEGLLTFAIVTISLGLA--RKIPGSFYMKTWISSVSKLALH-ILGS 120
            G +L   +      E ++TF ++ +  G+A   +  G F     I+  S L L+ I+G 
Sbjct: 150 NGTNLQAFVF-----EFIMTFFLMFVICGVATDNRAVGEF---AGIAIGSTLLLNVIIGG 201

Query: 121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVV---RPLAEEK 177
            +TG  MNPA  +G A+  G++   E I +Y LAP+   +   W++ +V    +PL+E  
Sbjct: 202 PVTGASMNPARSLGPAFVHGEY---EGIWIYLLAPVVGAIAGAWVYNIVRYTDKPLSETT 258

Query: 178 KDSK 181
           K + 
Sbjct: 259 KSAS 262

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. This aquaporin may function in transporting small molecules across the peribacteroid membranes.

Glycine max (taxid: 3847)

>sp|Q7PWV1|AQP_ANOGA Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4

 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 29/159 (18%)

Query: 41  IPAQVIGSITGVRFILDTFPQ--------IGRGPSLNVGIHHGALTEGLLTFAIVTISLG 92
           I +Q IG+I G   I    P          G  P L+ G   G L E L+TF +V +  G
Sbjct: 103 IVSQCIGAIAGAAVIKAATPSEVVGGLGVTGIAPGLSTG--QGVLIEALITFMLVFVVHG 160

Query: 93  LARKIPGSFYMKTWISSVSKLAL-------HILGSDMTGGCMNPASVMGWAYARGDHITK 145
           +          +T +   + LA+       H+     TG  MNPA   G A   G++   
Sbjct: 161 VCDN------RRTDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGNY--- 211

Query: 146 EHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDSKSKS 184
             + VYW+ PI   ++A  +++L  +     K D +S S
Sbjct: 212 TDLWVYWVGPIVGGIVAGAVYRLFFK---VRKGDEESNS 247

Forms a water-specific channel.

Anopheles gambiae (taxid: 7165)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	185
224137540	238	aquaporin, MIP family, SIP subfamily [Po	1.0	0.777	0.811	8e-84
255565376	240	aquaporin sip2.1, putative [Ricinus comm	1.0	0.770	0.784	6e-81
388509678	239	unknown [Lotus japonicus]	1.0	0.774	0.751	1e-80
225440240	236	PREDICTED: probable aquaporin SIP2-1 [Vi	0.929	0.728	0.813	6e-79
224086703	238	aquaporin, MIP family, SIP subfamily [Po	0.972	0.756	0.765	2e-78
356571855	236	PREDICTED: probable aquaporin SIP2-1-lik	1.0	0.783	0.745	6e-77
449437680	238	PREDICTED: probable aquaporin SIP2-1-lik	1.0	0.777	0.740	4e-76
357509129	239	hypothetical protein MTR_7g088310 [Medic	1.0	0.774	0.731	8e-75
334186042	260	putative aquaporin SIP2-1 [Arabidopsis t	1.0	0.711	0.681	1e-73
15230175	237	putative aquaporin SIP2-1 [Arabidopsis t	1.0	0.780	0.681	3e-73

>gi|224137540|ref|XP_002322583.1| aquaporin, MIP family, SIP subfamily [Populus trichocarpa] gi|222867213|gb|EEF04344.1| aquaporin, MIP family, SIP subfamily [Populus trichocarpa]

 Score =  314 bits (805), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 151/186 (81%), Positives = 169/186 (90%), Gaps = 1/186 (0%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP 60
           MFLFAFLGKVTKGGAYNPLT+L+S ISGDFS FLFT+GARIPAQVIGSITGVR  +DTFP
Sbjct: 53  MFLFAFLGKVTKGGAYNPLTILSSAISGDFSQFLFTIGARIPAQVIGSITGVRLFIDTFP 112

Query: 61  QIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGS 120
           +IG GP L V IH GALTEGLLTFAIVTISLGLARKIPGSF+MKTWISSVSKL+LHILGS
Sbjct: 113 EIGLGPRLTVDIHKGALTEGLLTFAIVTISLGLARKIPGSFFMKTWISSVSKLSLHILGS 172

Query: 121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDS 180
           D+TGGCMNPASVMGWAYARGDHITKEHILVYWLAPI+ T++A+W FKL+ RP  +++K+ 
Sbjct: 173 DLTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIEGTLLAVWTFKLLFRPQKQDEKEK 232

Query: 181 -KSKSE 185
            K K+E
Sbjct: 233 LKGKTE 238

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565376|ref|XP_002523679.1| aquaporin sip2.1, putative [Ricinus communis] gi|223537079|gb|EEF38714.1| aquaporin sip2.1, putative [Ricinus communis]

 Score =  305 bits (781), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 146/186 (78%), Positives = 166/186 (89%), Gaps = 1/186 (0%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP 60
           MF FAFLGK++KG AYNPLT+ +S ISGDFS FL TVGARIPAQVIGSITGV  ++ TFP
Sbjct: 55  MFFFAFLGKISKGAAYNPLTIFSSAISGDFSQFLLTVGARIPAQVIGSITGVTLVIQTFP 114

Query: 61  QIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGS 120
           +IG GP LNV IH GALTEGLLTFAIVTISLGLARKIPGSF+MKTWISSVSKL LHILGS
Sbjct: 115 EIGFGPRLNVDIHRGALTEGLLTFAIVTISLGLARKIPGSFFMKTWISSVSKLTLHILGS 174

Query: 121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDS 180
           D+TGG MNPASVMGWAYARGDHITKEHILVYWLAP++AT++A+W FKL+VRP  +E+K++
Sbjct: 175 DLTGGVMNPASVMGWAYARGDHITKEHILVYWLAPVEATLLAVWTFKLLVRPTTQERKEN 234

Query: 181 -KSKSE 185
            K KS+
Sbjct: 235 LKGKSD 240

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388509678|gb|AFK42905.1| unknown [Lotus japonicus]

 Score =  303 bits (777), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 139/185 (75%), Positives = 167/185 (90%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP 60
           MF FAFL KVT+GGAYNPLTVL+  ISGDFSNF++ +G+RIPAQV+GSI GV+ ++DT P
Sbjct: 55  MFFFAFLAKVTRGGAYNPLTVLSGAISGDFSNFIYCLGSRIPAQVLGSIVGVKLLIDTIP 114

Query: 61  QIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGS 120
           ++GRGP LN+ IH GALTEGLLTFAIV++SLGLA KIPGSF+MKTWISS+SKL LHILGS
Sbjct: 115 EVGRGPRLNIDIHRGALTEGLLTFAIVSVSLGLATKIPGSFFMKTWISSLSKLTLHILGS 174

Query: 121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDS 180
           D+TGGCMNPA+VMGWAYARGDHIT+EHILVYWLAPI+AT++A+W FKL+V P+ E+K  S
Sbjct: 175 DLTGGCMNPAAVMGWAYARGDHITREHILVYWLAPIEATILAVWTFKLLVPPVKEDKTGS 234

Query: 181 KSKSE 185
           KSKS+
Sbjct: 235 KSKSD 239

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440240|ref|XP_002283874.1| PREDICTED: probable aquaporin SIP2-1 [Vitis vinifera] gi|297741728|emb|CBI32860.3| unnamed protein product [Vitis vinifera]

 Score =  298 bits (763), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 140/172 (81%), Positives = 159/172 (92%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP 60
           MF FAFLGK++KGGAYNPLTVLA  ISGDFS FLFTVGARIPAQVIGSITGVR +++TFP
Sbjct: 52  MFFFAFLGKISKGGAYNPLTVLAGAISGDFSRFLFTVGARIPAQVIGSITGVRLLINTFP 111

Query: 61  QIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGS 120
           ++G GP L V IHHGALTEG LTFAIV ISLGL+R IPGSF+MKTWISSVSKLALHILGS
Sbjct: 112 EVGFGPRLTVDIHHGALTEGFLTFAIVMISLGLSRNIPGSFFMKTWISSVSKLALHILGS 171

Query: 121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 172
           D+TGGCMNPA+VMGWAYARGDHITKEHILVYWLAP++AT++A+W F+L+V+P
Sbjct: 172 DLTGGCMNPAAVMGWAYARGDHITKEHILVYWLAPMEATLLAVWTFRLLVQP 223

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086703|ref|XP_002307939.1| aquaporin, MIP family, SIP subfamily [Populus trichocarpa] gi|222853915|gb|EEE91462.1| aquaporin, MIP family, SIP subfamily [Populus trichocarpa]

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 140/183 (76%), Positives = 160/183 (87%), Gaps = 3/183 (1%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP 60
           +F FAFL KVTKG ++NPL VL+S ISGDFS+FLFT+G RIPAQVIGSIT VR ++DTFP
Sbjct: 53  LFFFAFLAKVTKGASFNPLAVLSSAISGDFSHFLFTIGTRIPAQVIGSITAVRLLIDTFP 112

Query: 61  QIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGS 120
           +IGRGP LNV IH GALTEGLL F +VTISLGLARKIPGSF+MKTWISS+SKL+LHILGS
Sbjct: 113 EIGRGPRLNVDIHKGALTEGLLAFGVVTISLGLARKIPGSFFMKTWISSISKLSLHILGS 172

Query: 121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDS 180
           D+TGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQ  ++A + FKL+ RP   +K+D 
Sbjct: 173 DLTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQGALLAAYTFKLLFRP---QKQDE 229

Query: 181 KSK 183
           K K
Sbjct: 230 KEK 232

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356571855|ref|XP_003554087.1| PREDICTED: probable aquaporin SIP2-1-like [Glycine max]

 Score =  291 bits (746), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 138/185 (74%), Positives = 159/185 (85%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP 60
           MF FAFL KVT+GGAYNPLTVLA  IS DF+NFL+  GARIP QV+GSI GV+ ++DT P
Sbjct: 52  MFFFAFLVKVTRGGAYNPLTVLADAISRDFNNFLYCAGARIPTQVVGSIVGVKLLIDTIP 111

Query: 61  QIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGS 120
           ++G GP LNV IH GALTEGLLTFAIVTISLGLA KI  +F+MKTWISS+SKL LHILGS
Sbjct: 112 EVGLGPRLNVDIHRGALTEGLLTFAIVTISLGLASKIRENFFMKTWISSLSKLTLHILGS 171

Query: 121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDS 180
           D+TGGCMNPASVMGWAYARGDHITKEH LVYWLAPI+AT++A+W FK +V+P  E+K  S
Sbjct: 172 DLTGGCMNPASVMGWAYARGDHITKEHFLVYWLAPIEATILAVWTFKFLVQPGKEDKSTS 231

Query: 181 KSKSE 185
           KSKS+
Sbjct: 232 KSKSD 236

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437680|ref|XP_004136619.1| PREDICTED: probable aquaporin SIP2-1-like [Cucumis sativus] gi|449519786|ref|XP_004166915.1| PREDICTED: probable aquaporin SIP2-1-like [Cucumis sativus]

 Score =  289 bits (739), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 137/185 (74%), Positives = 158/185 (85%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP 60
           MF FAFL K++ G AYNPLT+L++  SGDFS FLFTVGARIPAQVIG+IT VR I+ TFP
Sbjct: 54  MFFFAFLVKISNGSAYNPLTILSAAFSGDFSKFLFTVGARIPAQVIGAITAVRLIIHTFP 113

Query: 61  QIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGS 120
           + GRGP L VGIHHGALTEGLLTFAIV+ISLGL+RKI G+F+MKTWISS+SKL LHILGS
Sbjct: 114 EAGRGPRLAVGIHHGALTEGLLTFAIVSISLGLSRKIVGNFFMKTWISSLSKLTLHILGS 173

Query: 121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDS 180
           D+TGGCMNPASVMGWAYARG+HIT EHILVYW+APIQ T+ A+  FKL+ R   +EK + 
Sbjct: 174 DLTGGCMNPASVMGWAYARGEHITTEHILVYWIAPIQGTIAAVLTFKLIFRQPKQEKVNM 233

Query: 181 KSKSE 185
           K KSE
Sbjct: 234 KKKSE 238

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357509129|ref|XP_003624853.1| hypothetical protein MTR_7g088310 [Medicago truncatula] gi|217075650|gb|ACJ86185.1| unknown [Medicago truncatula] gi|355499868|gb|AES81071.1| hypothetical protein MTR_7g088310 [Medicago truncatula] gi|388495752|gb|AFK35942.1| unknown [Medicago truncatula]

 Score =  285 bits (728), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 136/186 (73%), Positives = 158/186 (84%), Gaps = 1/186 (0%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP 60
           MFLFAFL KV++GG YNPLTVLA  IS    NFLF V  RIPAQV GSI GV+ ++DT P
Sbjct: 54  MFLFAFLAKVSRGGVYNPLTVLADAISRGVLNFLFCVAFRIPAQVFGSIVGVKLLIDTIP 113

Query: 61  QIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLAR-KIPGSFYMKTWISSVSKLALHILG 119
           ++G+GP LNV IH GALTEGLLTFAIV+ISLGLA  KI G+F+MKTWISS+SKL LHILG
Sbjct: 114 EVGQGPRLNVDIHQGALTEGLLTFAIVSISLGLATTKIYGNFFMKTWISSLSKLTLHILG 173

Query: 120 SDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKD 179
           SD+TGGCMNPA+VMGWAYARGDHITKEHILVYWLAPI+AT+ A+W FK +VRP+ E+K  
Sbjct: 174 SDLTGGCMNPAAVMGWAYARGDHITKEHILVYWLAPIEATIFAVWTFKFIVRPVIEQKAV 233

Query: 180 SKSKSE 185
           SK+KS+
Sbjct: 234 SKTKSD 239

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334186042|ref|NP_001190113.1| putative aquaporin SIP2-1 [Arabidopsis thaliana] gi|332646071|gb|AEE79592.1| putative aquaporin SIP2-1 [Arabidopsis thaliana]

 Score =  280 bits (717), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 126/185 (68%), Positives = 159/185 (85%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP 60
           MF+FA+L + TKGG YNPLT LA+G+SG FS+F+F+V  RIP +VIGSI  V+ I+  FP
Sbjct: 53  MFIFAYLQQATKGGLYNPLTALAAGVSGGFSSFIFSVFVRIPVEVIGSILAVKHIIHVFP 112

Query: 61  QIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGS 120
           +IG+GP LNV IHHGALTEG+LTF IV +S+GL RKIPGSF+MKTWI S++KL LHILGS
Sbjct: 113 EIGKGPKLNVAIHHGALTEGILTFFIVLLSMGLTRKIPGSFFMKTWIGSLAKLTLHILGS 172

Query: 121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDS 180
           D+TGGCMNPA+VMGWAYARG+HITKEH+LVYWL P++AT++A+W FK+V +PL EE++  
Sbjct: 173 DLTGGCMNPAAVMGWAYARGEHITKEHLLVYWLGPVKATLLAVWFFKVVFKPLTEEQEKP 232

Query: 181 KSKSE 185
           K+KSE
Sbjct: 233 KAKSE 237

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15230175|ref|NP_191254.1| putative aquaporin SIP2-1 [Arabidopsis thaliana] gi|32363418|sp|Q9M1K3.1|SIP21_ARATH RecName: Full=Probable aquaporin SIP2-1; AltName: Full=Small basic intrinsic protein 2-1; Short=AtSIP2;1 gi|14423566|gb|AAK62465.1|AF387020_1 putative protein [Arabidopsis thaliana] gi|6911865|emb|CAB72165.1| putative protein [Arabidopsis thaliana] gi|21592762|gb|AAM64711.1| small basic membrane integral protein ZmSIP2-1 [Arabidopsis thaliana] gi|30023710|gb|AAP13388.1| At3g56950 [Arabidopsis thaliana] gi|332646070|gb|AEE79591.1| putative aquaporin SIP2-1 [Arabidopsis thaliana]

 Score =  280 bits (715), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 126/185 (68%), Positives = 159/185 (85%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP 60
           MF+FA+L + TKGG YNPLT LA+G+SG FS+F+F+V  RIP +VIGSI  V+ I+  FP
Sbjct: 53  MFIFAYLQQATKGGLYNPLTALAAGVSGGFSSFIFSVFVRIPVEVIGSILAVKHIIHVFP 112

Query: 61  QIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGS 120
           +IG+GP LNV IHHGALTEG+LTF IV +S+GL RKIPGSF+MKTWI S++KL LHILGS
Sbjct: 113 EIGKGPKLNVAIHHGALTEGILTFFIVLLSMGLTRKIPGSFFMKTWIGSLAKLTLHILGS 172

Query: 121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDS 180
           D+TGGCMNPA+VMGWAYARG+HITKEH+LVYWL P++AT++A+W FK+V +PL EE++  
Sbjct: 173 DLTGGCMNPAAVMGWAYARGEHITKEHLLVYWLGPVKATLLAVWFFKVVFKPLTEEQEKP 232

Query: 181 KSKSE 185
           K+KSE
Sbjct: 233 KAKSE 237

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	185
TAIR|locus:2146268	243	SIP1;2 [Arabidopsis thaliana (	0.902	0.687	0.319	6.1e-23
TAIR|locus:2103010	240	SIP1A "small and basic intrins	0.924	0.712	0.337	4.3e-22
UNIPROTKB|O77750	323	AQP4 "Aquaporin-4" [Bos taurus	0.810	0.464	0.296	4.5e-07
UNIPROTKB|I3LAR7	240	AQP4 "Uncharacterized protein"	0.810	0.625	0.290	1e-06
UNIPROTKB|P55087	323	AQP4 "Aquaporin-4" [Homo sapie	0.810	0.464	0.290	1.2e-06
UNIPROTKB|F1PEB5	293	AQP4 "Uncharacterized protein"	0.810	0.511	0.296	3.8e-06
RGD|2143	323	Aqp4 "aquaporin 4" [Rattus nor	0.816	0.467	0.304	5.8e-06
UNIPROTKB|F1LQ18	333	Aqp4 "Aquaporin-4" [Rattus nor	0.816	0.453	0.304	6.5e-06
MGI|MGI:107387	323	Aqp4 "aquaporin 4" [Mus muscul	0.816	0.467	0.304	6.6e-06
DICTYBASE|DDB_G0267378	279	aqpA "aquaporin A" [Dictyostel	0.881	0.584	0.248	1.2e-05

TAIR|locus:2146268 SIP1;2 [Arabidopsis thaliana (taxid:3702)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 55/172 (31%), Positives = 96/172 (55%)

Query:     3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQ- 61
             +F  +G V  G ++NP    A   +G  S+ LF++  R PAQ IG+  G   I++  P+ 
Sbjct:    58 IFTVIGNVLGGASFNPCGNAAFYTAGVSSDSLFSLAIRSPAQAIGAAGGAITIMEMIPEK 117

Query:    62 ----IGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHI 117
                 IG  PSL  G H+GA++E +L+F++  + L +  + P     KT++ +++ +++ +
Sbjct:   118 YKTRIGGKPSLQFGAHNGAISEVVLSFSVTFLVLLIILRGPRKLLAKTFLLALATVSVFV 177

Query:   118 LGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLV 169
             +GS  T   MNPA   GWAY    H T +H  VYW++     +++  LF+++
Sbjct:   178 VGSKFTRPFMNPAIAFGWAYIYKSHNTWDHFYVYWISSYTGAILSAMLFRII 229

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0015250 "water channel activity" evidence=IGI;IDA

GO:0046685 "response to arsenic-containing substance" evidence=RCA

TAIR|locus:2103010 SIP1A "small and basic intrinsic protein 1A" [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 60/178 (33%), Positives = 95/178 (53%)

Query:     1 MFLFAFLGKVTKGGA-YNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTF 59
             +F++  +  V  G A +NP    A  ++G   + LF++  R+PAQ IG+  G   I++  
Sbjct:    53 IFVYVSIFTVIFGSASFNPTGSAAFYVAGVPGDTLFSLAIRLPAQAIGAAGGALAIMEFI 112

Query:    60 PQ-----IGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLA 114
             P+     IG GPSL V +H GA+ E +L+F I    L +  + P     KT++ +++ ++
Sbjct:   113 PEKYKHMIG-GPSLQVDVHTGAIAETILSFGITFAVLLIILRGPRRLLAKTFLLALATIS 171

Query:   115 LHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 172
               + GS  TG  MNPA   GWAY    H T +HI VYW++     + A  LF+ +  P
Sbjct:   172 FVVAGSKYTGPAMNPAIAFGWAYMYSSHNTWDHIYVYWISSFVGALSAALLFRSIFPP 229

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0015250 "water channel activity" evidence=IGI;IDA

GO:0046685 "response to arsenic-containing substance" evidence=RCA

UNIPROTKB|O77750 AQP4 "Aquaporin-4" [Bos taurus (taxid:9913)]

 Score = 126 (49.4 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 51/172 (29%), Positives = 81/172 (47%)

Query:    13 GGAYNPLTVLASGISGDFS--NFLFTVGARIPAQVIGSITGVRFILDTFPQI--GRGPSL 68
             GG  NP   +A   +   S    +F + A+    +IG+  G+ +++ T P +  G G + 
Sbjct:    93 GGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGA--GILYLV-TPPSVVGGLGVTT 149

Query:    69 ---NVGIHHGALTEGLLTFAIV-TISLGLARK---IPGSFYMKTWISSVSKLAL-HILGS 120
                N+   HG L E ++TF +V TI      K   + GS  +   IS    +A+ H+   
Sbjct:   150 VHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGIS----VAIGHLFAI 205

Query:   121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 172
             + TG  MNPA   G A   G+    E+  +YW+ PI   V+A  L++ V  P
Sbjct:   206 NYTGASMNPARSFGPAVIMGNW---ENHWIYWVGPIIGAVLAGGLYEYVFCP 254

GO:0071346 "cellular response to interferon-gamma" evidence=IEA

GO:0070295 "renal water absorption" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0015250 "water channel activity" evidence=IEA

GO:0009897 "external side of plasma membrane" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|I3LAR7 AQP4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 123 (48.4 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 50/172 (29%), Positives = 80/172 (46%)

Query:    13 GGAYNPLTVLASGISGDFS--NFLFTVGARIPAQVIGSITGVRFILDTFPQI--GRGPSL 68
             GG  NP   +A   +   S    +F + A+    +IG+  G+ +++ T P +  G G + 
Sbjct:    10 GGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGA--GILYLV-TPPSVVGGLGVTT 66

Query:    69 ---NVGIHHGALTEGLLTFAIV-TISLGLARK---IPGSFYMKTWISSVSKLAL-HILGS 120
                N+   HG L E ++TF +V TI      K   + GS  +    S    +A+ H+   
Sbjct:    67 VHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFS----VAIGHLFAI 122

Query:   121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 172
             + TG  MNPA   G A   G+    E+  +YW+ PI   V+A  L++ V  P
Sbjct:   123 NYTGASMNPARSFGPAVIMGNW---ENHWIYWVGPIIGAVLAGGLYEYVFCP 171

GO:0071346 "cellular response to interferon-gamma" evidence=IEA

GO:0070295 "renal water absorption" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0015250 "water channel activity" evidence=IEA

GO:0009897 "external side of plasma membrane" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|P55087 AQP4 "Aquaporin-4" [Homo sapiens (taxid:9606)]

 Score = 124 (48.7 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 50/172 (29%), Positives = 81/172 (47%)

Query:    13 GGAYNPLTVLASGISGDFS--NFLFTVGARIPAQVIGSITGVRFILDTFPQI--GRGPSL 68
             GG  NP   +A   +   S    +F + A+    +IG+  G+ +++ T P +  G G ++
Sbjct:    93 GGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGA--GILYLV-TPPSVVGGLGVTM 149

Query:    69 ---NVGIHHGALTEGLLTFAIV-TISLGLARK---IPGSFYMKTWISSVSKLAL-HILGS 120
                N+   HG L E ++TF +V TI      K   + GS  +    S    +A+ H+   
Sbjct:   150 VHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFS----VAIGHLFAI 205

Query:   121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 172
             + TG  MNPA   G A   G+    E+  +YW+ PI   V+A  L++ V  P
Sbjct:   206 NYTGASMNPARSFGPAVIMGNW---ENHWIYWVGPIIGAVLAGGLYEYVFCP 254

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0007565 "female pregnancy" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=IEA

GO:0009314 "response to radiation" evidence=IEA

GO:0015288 "porin activity" evidence=IEA

GO:0015670 "carbon dioxide transport" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0030315 "T-tubule" evidence=IEA

GO:0042538 "hyperosmotic salinity response" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0051260 "protein homooligomerization" evidence=IEA

GO:0051384 "response to glucocorticoid stimulus" evidence=IEA

GO:0070295 "renal water absorption" evidence=IEA

GO:0071392 "cellular response to estradiol stimulus" evidence=IEA

GO:0050891 "multicellular organismal water homeostasis" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA;TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0071346 "cellular response to interferon-gamma" evidence=IDA

GO:0009897 "external side of plasma membrane" evidence=IDA

GO:0006810 "transport" evidence=TAS

GO:0005372 "water transmembrane transporter activity" evidence=TAS

GO:0007399 "nervous system development" evidence=TAS

GO:0007588 "excretion" evidence=TAS

GO:0006833 "water transport" evidence=TAS

GO:0015250 "water channel activity" evidence=EXP

GO:0055085 "transmembrane transport" evidence=TAS

UNIPROTKB|F1PEB5 AQP4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 121 (47.7 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 51/172 (29%), Positives = 80/172 (46%)

Query:    13 GGAYNPLTVLASGISGDFS--NFLFTVGARIPAQVIGSITGVRFILDTFPQI--GRGPSL 68
             GG  NP   +A   +   S    +F V A+    +IG+  G+ +++ T P +  G G + 
Sbjct:    93 GGHINPAVTVAMVCTRKISIAKSVFYVAAQCLGAIIGA--GILYLV-TPPSVVGGLGVTT 149

Query:    69 ---NVGIHHGALTEGLLTFAIV-TISLGLARK---IPGSFYMKTWISSVSKLAL-HILGS 120
                N+   HG L E ++TF +V TI      K   + GS  +    S    +A+ H+   
Sbjct:   150 VHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVALAIGFS----VAIGHLFAI 205

Query:   121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 172
             + TG  MNPA   G A   G+    E+  +YW+ PI   V+A  L++ V  P
Sbjct:   206 NYTGASMNPARSFGPAVIMGNW---ENHWIYWVGPIIGAVLAGGLYEYVFCP 254

GO:0016021 "integral to membrane" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

RGD|2143 Aqp4 "aquaporin 4" [Rattus norvegicus (taxid:10116)]

 Score = 117 (46.2 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
 Identities = 52/171 (30%), Positives = 77/171 (45%)

Query:    13 GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFI-LDTFPQI--GRGPSL- 68
             GG  NP   +A   +   S  +      I AQ +G+I G   + L T P +  G G +  
Sbjct:    93 GGHINPAVTVAMVCTRKIS--IAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTV 150

Query:    69 --NVGIHHGALTEGLLTFAIV-TISLGLARK---IPGSFYMKTWISSVSKLAL-HILGSD 121
               N+   HG L E ++TF +V TI      K   + GS  +    S    +A+ H+   +
Sbjct:   151 HGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVALAIGFS----VAIGHLFAIN 206

Query:   122 MTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 172
              TG  MNPA   G A   G+    E+  +YW+ PI   V+A  L++ V  P
Sbjct:   207 YTGASMNPARSFGPAVIMGNW---ENHWIYWVGPIIGAVLAGALYEYVFCP 254

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0005887 "integral to plasma membrane" evidence=IDA

GO:0005911 "cell-cell junction" evidence=IEA;ISO

GO:0006833 "water transport" evidence=ISO;IDA

GO:0007565 "female pregnancy" evidence=IEP

GO:0007605 "sensory perception of sound" evidence=IEA;ISO

GO:0009314 "response to radiation" evidence=IEP

GO:0009897 "external side of plasma membrane" evidence=IEA;ISO

GO:0015250 "water channel activity" evidence=ISO;IDA

GO:0015288 "porin activity" evidence=IDA

GO:0015670 "carbon dioxide transport" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0016323 "basolateral plasma membrane" evidence=IEA;ISO

GO:0030104 "water homeostasis" evidence=ISO

GO:0030315 "T-tubule" evidence=IDA

GO:0042383 "sarcolemma" evidence=IDA

GO:0042538 "hyperosmotic salinity response" evidence=IEP

GO:0043234 "protein complex" evidence=IDA

GO:0050891 "multicellular organismal water homeostasis" evidence=ISO

GO:0051260 "protein homooligomerization" evidence=IDA

GO:0051384 "response to glucocorticoid stimulus" evidence=IEP

GO:0055085 "transmembrane transport" evidence=ISO

GO:0070295 "renal water absorption" evidence=IEA;ISO

GO:0071346 "cellular response to interferon-gamma" evidence=IEA;ISO

GO:0071392 "cellular response to estradiol stimulus" evidence=IEP

UNIPROTKB|F1LQ18 Aqp4 "Aquaporin-4" [Rattus norvegicus (taxid:10116)]

 Score = 117 (46.2 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
 Identities = 52/171 (30%), Positives = 77/171 (45%)

Query:    13 GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFI-LDTFPQI--GRGPSL- 68
             GG  NP   +A   +   S  +      I AQ +G+I G   + L T P +  G G +  
Sbjct:   103 GGHINPAVTVAMVCTRKIS--IAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTV 160

Query:    69 --NVGIHHGALTEGLLTFAIV-TISLGLARK---IPGSFYMKTWISSVSKLAL-HILGSD 121
               N+   HG L E ++TF +V TI      K   + GS  +    S    +A+ H+   +
Sbjct:   161 HGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVALAIGFS----VAIGHLFAIN 216

Query:   122 MTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 172
              TG  MNPA   G A   G+    E+  +YW+ PI   V+A  L++ V  P
Sbjct:   217 YTGASMNPARSFGPAVIMGNW---ENHWIYWVGPIIGAVLAGALYEYVFCP 264

GO:0005215 "transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:107387 Aqp4 "aquaporin 4" [Mus musculus (taxid:10090)]

 Score = 116 (45.9 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
 Identities = 52/171 (30%), Positives = 76/171 (44%)

Query:    13 GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFI-LDTFPQI--GRGPSL- 68
             GG  NP   +A   +   S  +      I AQ +G+I G   + L T P +  G G +  
Sbjct:    93 GGHINPAVTVAMVCTRKIS--IAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGLGVTTV 150

Query:    69 --NVGIHHGALTEGLLTFAIV-TISLGLARK---IPGSFYMKTWISSVSKLAL-HILGSD 121
               N+   HG L E ++TF +V TI      K   + GS  +    S    +A+ H+   +
Sbjct:   151 HGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFS----VAIGHLFAIN 206

Query:   122 MTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 172
              TG  MNPA   G A   G+     H  +YW+ PI   V+A  L++ V  P
Sbjct:   207 YTGASMNPARSFGPAVIMGNWAN--H-WIYWVGPIMGAVLAGALYEYVFCP 254

GO:0005215 "transporter activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0005887 "integral to plasma membrane" evidence=ISO;TAS

GO:0005911 "cell-cell junction" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006833 "water transport" evidence=ISO;IMP;IDA;TAS

GO:0007605 "sensory perception of sound" evidence=IMP

GO:0009897 "external side of plasma membrane" evidence=ISO

GO:0015250 "water channel activity" evidence=ISO;IDA

GO:0015288 "porin activity" evidence=ISO

GO:0015670 "carbon dioxide transport" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=NAS

GO:0016323 "basolateral plasma membrane" evidence=IDA

GO:0030104 "water homeostasis" evidence=IMP;NAS

GO:0030315 "T-tubule" evidence=ISO

GO:0042383 "sarcolemma" evidence=ISO

GO:0043234 "protein complex" evidence=ISO

GO:0051260 "protein homooligomerization" evidence=ISO

GO:0055085 "transmembrane transport" evidence=IDA

GO:0070295 "renal water absorption" evidence=IGI;IMP

GO:0071346 "cellular response to interferon-gamma" evidence=ISO

DICTYBASE|DDB_G0267378 aqpA "aquaporin A" [Dictyostelium discoideum (taxid:44689)]

 Score = 118 (46.6 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 46/185 (24%), Positives = 83/185 (44%)

Query:     1 MFLFAFLGKVT--KGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDT 58
             M L A +  V+   G   NP   LA+ +SG     L      + AQ++G I G   +   
Sbjct:    78 MALAALIWAVSGVSGCNLNPAVTLANLLSGRVG--LIDSLYYVAAQILGCIAGAGILYGC 135

Query:    59 FPQIGRGPSLNVGIHHGA--LTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSK---- 112
              P + R   +++G+ H A  +  G      + ++  L   + G+     W   +++    
Sbjct:   136 LPNMYR---IDLGVPHLAPGMNTGQAFLMEMMLTSILCLCVLGTSVFNVWDRRLNRIAPF 192

Query:   113 ---LALHI---LGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLF 166
                LAL I   +G + +GG +NP  V+G +   G      H  VYWL PI   ++A +++
Sbjct:   193 AIGLALFIGVAIGFNFSGGALNPVRVLGPSIISG---VWSHHWVYWLGPIVGAILAAFIY 249

Query:   167 KLVVR 171
             + +++
Sbjct:   250 RCLLQ 254

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q10M80	SIP21_ORYSJ	No assigned EC number	0.5238	1.0	0.74	yes	no
Q9M1K3	SIP21_ARATH	No assigned EC number	0.6810	1.0	0.7805	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_XVI1012 aquaporin, MIP family, SIP subfamily (238 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	185
cd00333	228	cd00333, MIP, Major intrinsic protein (MIP) superf	4e-06
COG0580	241	COG0580, GlpF, Glycerol uptake facilitator and rel	6e-06
pfam00230	218	pfam00230, MIP, Major intrinsic protein	2e-05
TIGR00861	216	TIGR00861, MIP, MIP family channel proteins	2e-04

>gnl|CDD|238204 cd00333, MIP, Major intrinsic protein (MIP) superfamily

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 40/174 (22%), Positives = 63/174 (36%), Gaps = 19/174 (10%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIGRG------- 65
           GG  NP   LA  + G F   L  V   I AQ++G+I G   +   +  +          
Sbjct: 57  GGHINPAVTLALAVGGRFP--LIRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNI 114

Query: 66  --------PSLNVGIHHGALTEGLLTFAIVTISLGLA--RKIPGSFYMKTWISSVSKLAL 115
                   PS  V   +    E + TF +V +          P    +      +   A+
Sbjct: 115 VAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPPPGGLAPLAIGLLVAAI 174

Query: 116 HILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLV 169
            + G  +TG  MNPA  +G A   G      +  VYW+ P+   +    ++  V
Sbjct: 175 GLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228

Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms. Length = 228

>gnl|CDD|223653 COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]

 Score = 44.5 bits (106), Expect = 6e-06
 Identities = 40/181 (22%), Positives = 63/181 (34%), Gaps = 28/181 (15%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGV------------RFILDTFP 60
           G   NP   +A  + G F      V   I AQV+G+  G                 D   
Sbjct: 64  GAHLNPAVTIALAVRGRFP--WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLA 121

Query: 61  QIGRGPSLNVGIH--HGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHIL 118
            +G   +   G       L E + TF +V   L L      +         +   A+ + 
Sbjct: 122 SLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNANAGFAPLAIGLLVTAIGLS 181

Query: 119 GSDMTGGCMNPA---------SVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLV 169
               TG  +NPA         S+ GWA  +GD     +  +  + PI   ++   L+KL+
Sbjct: 182 LGPTTGTAINPARDLGPRLAHSLAGWAANKGDS---SYFWIPVIGPIVGAILGALLYKLL 238

Query: 170 V 170
           +
Sbjct: 239 L 239

Length = 241

>gnl|CDD|215807 pfam00230, MIP, Major intrinsic protein

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 36/163 (22%), Positives = 55/163 (33%), Gaps = 15/163 (9%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITG---VRFI---LDTFPQIGRGP 66
           G   NP    A  +    S  L      I AQ++G+I G   ++ +   L          
Sbjct: 62  GAHLNPAVTFALLVGRRIS--LLRAIYYIIAQLLGAICGAALLKGVTNGLQRAGGFANSL 119

Query: 67  SLNVGIHHGALTEGLLTFAIVTISLGLA---RKIPGSFYMKTWISSVSKLALHILGSDMT 123
           +  V      + E +LTF +V          R           I   +    H+ G   T
Sbjct: 120 APGVNAGQAFVVEIILTFQLVYTVFATTDDPRNGSLGHVAPLAIGF-AVFLNHLAGGPYT 178

Query: 124 GGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLF 166
           G  MNPA   G A         +   VYW+ P+    +A  ++
Sbjct: 179 GASMNPARSFGPAVVLWKW---DDHWVYWVGPLIGAALAALVY 218

MIP (Major Intrinsic Protein) family proteins exhibit essentially two distinct types of channel properties: (1) specific water transport by the aquaporins, and (2) small neutral solutes transport, such as glycerol by the glycerol facilitators. Length = 218

>gnl|CDD|233156 TIGR00861, MIP, MIP family channel proteins

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 12/163 (7%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP-------QIGRG 65
           G   NP   +A  +   F   L  V   I AQ+IG+I G   +             +   
Sbjct: 57  GAHLNPAVTIALLLGRRFP--LKRVPVYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGS 114

Query: 66  PSLNVGIHHGALTEGLLTFAIVTISLGLA--RKIPGSFYMKTWISSVSKLALHILGSDMT 123
            S  V        E + T  +V +       R              +    +H+     T
Sbjct: 115 ASAGVSSGQAFFVEFIGTAILVLVIFATTDDRNRVPRGGFAPLAIGLLVFLIHLSMGPYT 174

Query: 124 GGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLF 166
           G  MNPA  +G A   G      +  VYW+ PI   ++   ++
Sbjct: 175 GTGMNPARSLGPALFAGLAGW-GNHWVYWVGPIIGAILGALVY 216

1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is large and diverse, possessing over 100 members that all form transmembrane channels. These channel proteins function in water, smallcarbohydrate (e.g., glycerol), urea, NH3, CO2 and possibly ion transport by an energy independent mechanism. They are found ubiquitously in bacteria, archaeaand eukaryotes. The MIP family contains two major groups of channels: aquaporins and glycerol facilitators.The known aquaporins cluster loosely together as do the known glycerol facilitators. MIP family proteins are believed to form aqueous pores that selectively allow passive transport of their solute(s) across the membrane with minimal apparent recognition. Aquaporins selectively transport water (but not glycerol) while glycerol facilitators selectively transport glycerol but not water. Some aquaporins can transport NH3 and CO2. Glycerol facilitators function as solute nonspecific channels, and may transport glycerol, dihydroxyacetone, propanediol, urea and other small neutral molecules in physiologically importantprocesses. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes [Transport and binding proteins, Unknown substrate]. Length = 216

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	185
KOG0223	238	consensus Aquaporin (major intrinsic protein famil	100.0
PLN00184	296	aquaporin NIP1; Provisional	100.0
PLN00026	298	aquaporin NIP; Provisional	100.0
PLN00182	283	putative aquaporin NIP4; Provisional	100.0
PRK05420	231	aquaporin Z; Provisional	100.0
PF00230	227	MIP: Major intrinsic protein; InterPro: IPR000425	100.0
COG0580	241	GlpF Glycerol uptake facilitator and related perme	100.0
PLN00027	252	aquaporin TIP; Provisional	100.0
PLN00166	250	aquaporin TIP2; Provisional	100.0
PLN00167	256	aquaporin TIP5; Provisional	100.0
PTZ00016	294	aquaglyceroporin; Provisional	100.0
PLN00183	274	putative aquaporin NIP7; Provisional	100.0
KOG0224	316	consensus Aquaporin (major intrinsic protein famil	100.0
cd00333	228	MIP Major intrinsic protein (MIP) superfamily. Mem	100.0
TIGR00861	216	MIP MIP family channel proteins. processes. Some m	100.0
PLN00026	298	aquaporin NIP; Provisional	99.74
PLN00184	296	aquaporin NIP1; Provisional	99.73
PLN00166	250	aquaporin TIP2; Provisional	99.68
PLN00183	274	putative aquaporin NIP7; Provisional	99.67
PLN00167	256	aquaporin TIP5; Provisional	99.65
PTZ00016	294	aquaglyceroporin; Provisional	99.64
PLN00182	283	putative aquaporin NIP4; Provisional	99.64
cd00333	228	MIP Major intrinsic protein (MIP) superfamily. Mem	99.63
PRK05420	231	aquaporin Z; Provisional	99.62
PLN00027	252	aquaporin TIP; Provisional	99.62
COG0580	241	GlpF Glycerol uptake facilitator and related perme	99.57
TIGR00861	216	MIP MIP family channel proteins. processes. Some m	99.54
KOG0224	316	consensus Aquaporin (major intrinsic protein famil	99.52
KOG0223	238	consensus Aquaporin (major intrinsic protein famil	99.5
PF00230	227	MIP: Major intrinsic protein; InterPro: IPR000425	99.4
PF04632	650	FUSC: Fusaric acid resistance protein family; Inte	84.99

>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.5e-46  Score=298.27  Aligned_cols=168  Identities=26%  Similarity=0.393  Sum_probs=153.0

Q ss_pred             EEEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-------CCCCCCCcchHH
Q 029946            2 FLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI-------GRGPSLNVGIHH   74 (185)
Q Consensus         2 ~~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-------~~~~~~~~s~~~   74 (185)
                      ..|+++|+|| |||+|||||+++++.|++  ++.+++.|+.+|++|+++|+++++.+.|.+       ...+.++.+..|
T Consensus        57 v~i~~~g~iS-GaH~NPAVT~a~~~~~~i--sl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q  133 (238)
T KOG0223|consen   57 VLVYSTGHIS-GAHFNPAVTLAFAVGGKI--SLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQ  133 (238)
T ss_pred             HHHhhhcccc-ccccCHHHHHHHHHhCCC--cHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcch
Confidence            4678999999 999999999999999999  999999999999999999999999999873       235667889999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhh
Q 029946           75 GALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLA  154 (185)
Q Consensus        75 ~~~~E~~~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~  154 (185)
                      +++.|++.||.|++++++...|. ++..+.|+.+|+++.+.+++.+++||++|||||+|||++..+   .|+++|+||+|
T Consensus       134 ~~~~E~ilTf~Lv~~v~~~a~d~-~~~~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~---~w~~hwiYwvg  209 (238)
T KOG0223|consen  134 GLVIEIILTFILVFTVFATATDP-RRSELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG---SWDDHWIYWVG  209 (238)
T ss_pred             hHHHHHHHHHHHhheeEEEeecC-CCcccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc---CCCcEEEEEhh
Confidence            99999999999999999955433 333789999999999999999999999999999999999987   69999999999


Q ss_pred             hHHHHHHHHHHHHHhcCCchhh
Q 029946          155 PIQATVIALWLFKLVVRPLAEE  176 (185)
Q Consensus       155 p~~Ga~~a~~~~~~~~~~~~~~  176 (185)
                      |++|+++++++|+.++.++.+|
T Consensus       210 P~~Ga~~a~~~y~~v~~~~~~~  231 (238)
T KOG0223|consen  210 PLLGAILAALIYRLVFIPDESE  231 (238)
T ss_pred             HHHHHHHHHHHHHHhccCcccc
Confidence            9999999999999999998333

>PLN00184 aquaporin NIP1; Provisional

Probab=100.00  E-value=1.1e-42  Score=287.58  Aligned_cols=173  Identities=23%  Similarity=0.256  Sum_probs=148.3

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC----------CCCCCCcch
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG----------RGPSLNVGI   72 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~----------~~~~~~~s~   72 (185)
                      .++++|+|| |||+|||||++.++.|++  +|++.+.|+++|++|+++|+.+++.+++...          ....+..+.
T Consensus       101 ~i~~~g~iS-GaH~NPAVTla~al~g~~--~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~  177 (296)
T PLN00184        101 LIYSLGHIS-GAHINPAVTIAFASCGRF--PLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSD  177 (296)
T ss_pred             HHHHhcCCC-ccccCHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcH
Confidence            456789999 999999999999999999  9999999999999999999999999885321          011223478


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHh
Q 029946           73 HHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYW  152 (185)
Q Consensus        73 ~~~~~~E~~~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~  152 (185)
                      .++++.|+++||+|+++++++.+++.+.....|+.+|+++.++.++.+++||++|||||||+|+++.+   .|+++|+||
T Consensus       178 ~~af~~E~i~TfvLv~~il~~~~~~~~~~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~---~~~~~WVy~  254 (296)
T PLN00184        178 LQAFVMEFIVTFYLMFIISGVATDNRAIGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG---CYKGIWIYI  254 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHheeccCcCCCcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh---cccccchHH
Confidence            99999999999999999998866433333477999999999999999999999999999999999876   688999999


Q ss_pred             hhhHHHHHHHHHHHHHhcCCchhhhcccc
Q 029946          153 LAPIQATVIALWLFKLVVRPLAEEKKDSK  181 (185)
Q Consensus       153 v~p~~Ga~~a~~~~~~~~~~~~~~~~~~k  181 (185)
                      +||++|+++++++|++++.++...++..|
T Consensus       255 vgPilGa~laal~y~~l~~~~~~~~~~~~  283 (296)
T PLN00184        255 VAPTLGAIAGAWVYNTVRYTDKPLREITK  283 (296)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCcchhhcc
Confidence            99999999999999999876655444443

>PLN00026 aquaporin NIP; Provisional

Probab=100.00  E-value=4.6e-41  Score=277.63  Aligned_cols=167  Identities=21%  Similarity=0.214  Sum_probs=144.9

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC--CCCCCCcchHHHHHHHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG--RGPSLNVGIHHGALTEG   80 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--~~~~~~~s~~~~~~~E~   80 (185)
                      .++++|+|| |||+|||||++.++.|++  +|++.+.|+++|++|+++|+.+++.++++..  +...++.+..++++.|+
T Consensus       118 ~i~~~g~IS-GaHlNPAVTla~al~g~~--~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~~g~t~p~~s~~~a~~~Ef  194 (298)
T PLN00026        118 VILSTGHIS-GAHLNPSLTIAFAALRHF--PWKHVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEF  194 (298)
T ss_pred             HHHHhhccC-ccccCHHHHHHHHHhCCC--cHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCceeeecccHHHHHHHHH
Confidence            456789999 999999999999999999  9999999999999999999999999986531  11223568899999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhhHHHHH
Q 029946           81 LLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATV  160 (185)
Q Consensus        81 ~~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p~~Ga~  160 (185)
                      ++|++|+++++++.++++......++.+|+++++.+++.+++||+++||||||+|+++.+   +|.++|+||++|++|++
T Consensus       195 i~TfiLv~vi~~v~~~~~~~~~~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~---~~~~~wVy~vaPilGAi  271 (298)
T PLN00026        195 IITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG---NYRAIWIYLVAPTLGAL  271 (298)
T ss_pred             HHHHHHHHhheeeecCCCCcCCccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC---CchheeHHHHHHHHHHH
Confidence            999999999997754332223356899999999999999999999999999999999865   79999999999999999


Q ss_pred             HHHHHHHHhcCCchh
Q 029946          161 IALWLFKLVVRPLAE  175 (185)
Q Consensus       161 ~a~~~~~~~~~~~~~  175 (185)
                      +++++|+.+..++.+
T Consensus       272 lga~ly~~~~~~~~~  286 (298)
T PLN00026        272 AGAGTYTAVKLREED  286 (298)
T ss_pred             HHHHHHHHHhCcccc
Confidence            999999998655544

>PLN00182 putative aquaporin NIP4; Provisional

Probab=100.00  E-value=3.8e-40  Score=271.03  Aligned_cols=163  Identities=19%  Similarity=0.265  Sum_probs=142.6

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC---CCCCCCCcchHHHHHHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI---GRGPSLNVGIHHGALTE   79 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~---~~~~~~~~s~~~~~~~E   79 (185)
                      .+++++++| |||+|||||++.++.|++  +|.+.+.|+++|++|+++|+++++.+++..   .....++.+..++++.|
T Consensus        89 ~i~~~g~iS-Gah~NPAVTla~~~~~~~--~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p~~s~~~a~~~E  165 (283)
T PLN00182         89 MIYSTGHIS-GAHFNPAVTVTFAIFRRF--PWYQVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFGTTPTDSSGQALVAE  165 (283)
T ss_pred             HHHHhcCCC-ccccCHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeeCCCCcchHHHHHHH
Confidence            356789999 999999999999999999  999999999999999999999999988542   12223345788999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhhHHHH
Q 029946           80 GLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQAT  159 (185)
Q Consensus        80 ~~~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p~~Ga  159 (185)
                      +++|++|+++++...+++.......++.+|+++++..++.+++||+++||||+|+|+++.+   .|.++|+||++|++|+
T Consensus       166 ~l~TfiLv~~i~~~~~~~~~~~~~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~---~~~~~wvY~vap~lGA  242 (283)
T PLN00182        166 IIISFLLMFVISGVATDSRAVGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG---RYKGIWVYIVGPFVGI  242 (283)
T ss_pred             HHHHHHHHHHHHhheeccccCCcchhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc---cccceeHHHHHHHHHH
Confidence            9999999999998765332233457899999999999999999999999999999999876   6889999999999999


Q ss_pred             HHHHHHHHHhcC
Q 029946          160 VIALWLFKLVVR  171 (185)
Q Consensus       160 ~~a~~~~~~~~~  171 (185)
                      ++++++|++++.
T Consensus       243 ~lgally~~l~~  254 (283)
T PLN00182        243 IAGGFVYNLIRF  254 (283)
T ss_pred             HHHHHHHHHHhc
Confidence            999999999984

>PRK05420 aquaporin Z; Provisional

Probab=100.00  E-value=7.8e-40  Score=263.18  Aligned_cols=165  Identities=21%  Similarity=0.293  Sum_probs=142.6

Q ss_pred             EeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC--------C-C------CCC
Q 029946            4 FAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG--------R-G------PSL   68 (185)
Q Consensus         4 i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--------~-~------~~~   68 (185)
                      +++++++| |+|+|||||++.++.|++  +|++.+.|+++|++|+++|+.+++.++++..        . .      ...
T Consensus        51 i~~~g~iS-G~h~NPAvtl~~~~~~~i--~~~~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (231)
T PRK05420         51 AYAVGHIS-GGHFNPAVSVGLWAGGRF--PAKELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPG  127 (231)
T ss_pred             HHHHhCcc-cccCCHHHHHHHHHhCCC--CHHHhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCC
Confidence            56789999 999999999999999999  9999999999999999999999998875420        0 0      012


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccc
Q 029946           69 NVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHI  148 (185)
Q Consensus        69 ~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~  148 (185)
                      ..+..++++.|+++|++|+++++...++++ .....|+.+|+.+..+.++.+++||+++||||||+|+++.+ +..|+++
T Consensus       128 ~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~-~~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g-~~~~~~~  205 (231)
T PRK05420        128 GYSLLAALVCEVVLTAFFLLVILGATDKRA-PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG-GWALEQL  205 (231)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHhCCCC-CCcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhC-CCCccce
Confidence            346789999999999999999999887543 23467999999999999999999999999999999999986 2345689


Q ss_pred             hhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946          149 LVYWLAPIQATVIALWLFKLVVRPL  173 (185)
Q Consensus       149 ~vy~v~p~~Ga~~a~~~~~~~~~~~  173 (185)
                      |+||++|++|+++++++|+++++++
T Consensus       206 wvy~vgP~~Ga~laa~~y~~l~~~~  230 (231)
T PRK05420        206 WLFWVAPIVGAIIGGLIYRLLLEKD  230 (231)
T ss_pred             EEeehHHHHHHHHHHHHHHHHhccC
Confidence            9999999999999999999987654

>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]

Probab=100.00  E-value=6.5e-40  Score=263.07  Aligned_cols=158  Identities=24%  Similarity=0.384  Sum_probs=140.6

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-----C--CCCCCCcchHHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI-----G--RGPSLNVGIHHG   75 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-----~--~~~~~~~s~~~~   75 (185)
                      .+++++++| |||+|||||++.++.|++  ++++++.|+++|++|+++|+.+++.++++.     .  ..+.++.+..++
T Consensus        61 ~i~~~~~iS-GaH~NPaVTla~~l~g~~--~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~  137 (227)
T PF00230_consen   61 LIYAFGPIS-GAHFNPAVTLAFALTGRI--SWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQA  137 (227)
T ss_dssp             HHHHHHHHH-TSS-SHHHHHHHHHTTSS--SHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHH
T ss_pred             hhhhhhhcc-ccccccchhhheeeeeee--cccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhh
Confidence            356789999 999999999999999999  999999999999999999999999999872     1  246677899999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCC--cchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhh
Q 029946           76 ALTEGLLTFAIVTISLGLARKIPGS--FYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWL  153 (185)
Q Consensus        76 ~~~E~~~Tf~lv~~i~~~~~~~~~~--~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v  153 (185)
                      ++.|+++|++|+++++...+++.+.  ..+.|+.+|+++.+..+..++.||+++||||+++|+++.+   .|+++|+||+
T Consensus       138 ~~~E~~~t~il~~~i~~~~~~~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~---~~~~~wvy~~  214 (227)
T PF00230_consen  138 FFSEFIGTFILVLVILAVADDKRKFPLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSG---IWDYFWVYWV  214 (227)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSTTSSSTSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHT---HHTTTTHHHH
T ss_pred             hhhhhhhhhHHHhhhhhhcccccccccccccceeEEEEEeecccccccccccccCchhhcCceeecc---cCCeEEEEEe
Confidence            9999999999999999998864332  2467999999999999999999999999999999999987   4999999999


Q ss_pred             hhHHHHHHHHHHH
Q 029946          154 APIQATVIALWLF  166 (185)
Q Consensus       154 ~p~~Ga~~a~~~~  166 (185)
                      +|++|+++++++|
T Consensus       215 ~P~~Ga~~a~~~Y  227 (227)
T PF00230_consen  215 GPFIGAILAALLY  227 (227)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHhhC
Confidence            9999999999987

These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....

>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.6e-39  Score=259.94  Aligned_cols=165  Identities=22%  Similarity=0.258  Sum_probs=141.6

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----C-----------CCCC
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI----G-----------RGPS   67 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----~-----------~~~~   67 (185)
                      .++++|+|| |||+|||||+++++.|++  +|++.+.|+++|++||++|+.++|.+++..    .           ..|.
T Consensus        55 ~iy~~g~iS-GaHlNPAVTi~la~~g~f--p~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~  131 (241)
T COG0580          55 AIYAFGGIS-GAHLNPAVTIALAVRGRF--PWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPG  131 (241)
T ss_pred             HHHhccCcC-ccccChHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCC
Confidence            467899999 999999999999999999  999999999999999999999999998642    1           1222


Q ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHh---CCCC-
Q 029946           68 LNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYAR---GDHI-  143 (185)
Q Consensus        68 ~~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~---~~~~-  143 (185)
                      . .+..++++.|+++||+|++.+++..++++.+....|+.+|+.++.+.+..++.||..+|||||+|||+..   ++.. 
T Consensus       132 ~-~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~  210 (241)
T COG0580         132 G-YSLGQAFLIEFVGTFVLVLGILALTDDGNANAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAAN  210 (241)
T ss_pred             c-ccHHHHHHHHHHHHHHHHHHHHHhhccCcccccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccC
Confidence            2 3678999999999999999999988633224458999999999999999999999999999999999943   3111 


Q ss_pred             --CcccchhHhhhhHHHHHHHHHHHHHhcC
Q 029946          144 --TKEHILVYWLAPIQATVIALWLFKLVVR  171 (185)
Q Consensus       144 --~~~~~~vy~v~p~~Ga~~a~~~~~~~~~  171 (185)
                        ++.|.|+||++|++|+++++++|+.++.
T Consensus       211 ~g~~~y~wipvigpiiGa~lg~~~~~~~~~  240 (241)
T COG0580         211 KGDSSYFWIPVIGPIVGAILGALLYKLLLG  240 (241)
T ss_pred             CCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence              1258999999999999999999998764

>PLN00027 aquaporin TIP; Provisional

Probab=100.00  E-value=2.2e-39  Score=263.59  Aligned_cols=165  Identities=22%  Similarity=0.230  Sum_probs=144.1

Q ss_pred             EeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC---CCCCCCCcchHHHHHHHH
Q 029946            4 FAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI---GRGPSLNVGIHHGALTEG   80 (185)
Q Consensus         4 i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~---~~~~~~~~s~~~~~~~E~   80 (185)
                      +++.+++| |+|+|||+|++.++.|++  +|.+...|+++|++|+++|+.+.+.+.++.   ...+.++.+..++++.|+
T Consensus        73 i~~~~~iS-Gah~NPAvtl~~~~~g~~--~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  149 (252)
T PLN00027         73 VSVGANIS-GGHVNPAVTFGAFIGGNI--TLLRGILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGVWNAFVFEI  149 (252)
T ss_pred             HHHHcccC-ccccChHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCccHHHHHHHHH
Confidence            45678999 999999999999999999  999999999999999999999999887653   123445678899999999


Q ss_pred             HHHHHHHHHHHHhhcCCCC--CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhhHHH
Q 029946           81 LLTFAIVTISLGLARKIPG--SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQA  158 (185)
Q Consensus        81 ~~Tf~lv~~i~~~~~~~~~--~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p~~G  158 (185)
                      ++||+|+++++....++++  .....|+.+|+.+..+.++.+++||+++||||||+|+++.+   .|+++|+||+||++|
T Consensus       150 i~Tf~Lv~~i~~~~~~~~~~~~~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~---~~~~~wvy~vgP~~G  226 (252)
T PLN00027        150 VMTFGLVYTVYATAVDPKKGDLGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW---TWTNHWVYWAGPLIG  226 (252)
T ss_pred             HHHHHHHHHHHHhccccccCCccchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh---cchhhhHHHHHHHHH
Confidence            9999999999987543221  12467999999999999999999999999999999999976   689999999999999


Q ss_pred             HHHHHHHHHHhcCCch
Q 029946          159 TVIALWLFKLVVRPLA  174 (185)
Q Consensus       159 a~~a~~~~~~~~~~~~  174 (185)
                      +++++++|++++.++.
T Consensus       227 a~laa~~y~~l~~~~~  242 (252)
T PLN00027        227 GGIAGLVYELIFIGST  242 (252)
T ss_pred             HHHHHHHHHHHhcCCc
Confidence            9999999999986533

>PLN00166 aquaporin TIP2; Provisional

Probab=100.00  E-value=2.5e-39  Score=262.67  Aligned_cols=166  Identities=23%  Similarity=0.278  Sum_probs=144.7

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC---CCCCCCcchHHHHHHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG---RGPSLNVGIHHGALTE   79 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~---~~~~~~~s~~~~~~~E   79 (185)
                      .+++++++| |+|+|||+|++.++.|++  +|.+...|+++|++|+++|+.+.+.+++++.   .....+.+..++++.|
T Consensus        70 ~i~~~g~iS-Gah~NPAvt~~~~l~g~~--~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  146 (250)
T PLN00166         70 GVSIAANIS-GGHLNPAVTLGLAIGGNI--TIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVME  146 (250)
T ss_pred             HHHHHhccc-ccccCHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHH
Confidence            356789999 999999999999999999  9999999999999999999999999886531   1233456889999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCC--CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhhHH
Q 029946           80 GLLTFAIVTISLGLARKIPG--SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQ  157 (185)
Q Consensus        80 ~~~Tf~lv~~i~~~~~~~~~--~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p~~  157 (185)
                      +++||+|+++++...+++.+  .....|+.+|+.++.+.+..+++||+++||||+|+|+++.+   .|+++|+||++|++
T Consensus       147 ~v~Tf~Lv~~i~~~~~~~~~~~~~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~---~~~~~wvywvgPi~  223 (250)
T PLN00166        147 IVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG---DFSQIWIYWVGPLV  223 (250)
T ss_pred             HHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC---CCcccchhhHHHHH
Confidence            99999999999988653221  12468999999999999999999999999999999999976   69999999999999


Q ss_pred             HHHHHHHHHHHhcCCch
Q 029946          158 ATVIALWLFKLVVRPLA  174 (185)
Q Consensus       158 Ga~~a~~~~~~~~~~~~  174 (185)
                      |+++++++|+.++.+..
T Consensus       224 Ga~~aa~~y~~l~~~~~  240 (250)
T PLN00166        224 GGALAGLIYGDVFIGSY  240 (250)
T ss_pred             HHHHHHHHHHHHhcccC
Confidence            99999999998875443

>PLN00167 aquaporin TIP5; Provisional

Probab=100.00  E-value=1.9e-39  Score=264.16  Aligned_cols=174  Identities=21%  Similarity=0.282  Sum_probs=149.8

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC---CCCCCCcchHHHHHHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG---RGPSLNVGIHHGALTE   79 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~---~~~~~~~s~~~~~~~E   79 (185)
                      .+++++++| |+|+|||+|++.++.|++  +|++.+.|+++|++|+++|+.+.+.++++..   .....+.+..++++.|
T Consensus        74 ~i~~~g~iS-Gah~NPAvtl~~~~~g~~--~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E  150 (256)
T PLN00167         74 AVYIAANIS-GGHVNPAVTFGMAVGGHI--SVPTAMFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLE  150 (256)
T ss_pred             HHHHhhccc-ccccCHHHHHHHHHhCCC--cHhhhhHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHH
Confidence            356789999 999999999999999999  9999999999999999999999999876531   1122345678899999


Q ss_pred             HHHHHHHHHHHHHhhcCCCC-CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhhHHH
Q 029946           80 GLLTFAIVTISLGLARKIPG-SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQA  158 (185)
Q Consensus        80 ~~~Tf~lv~~i~~~~~~~~~-~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p~~G  158 (185)
                      +++|++|+++++...+++.+ .....|+.+|+.+..+.++.+++||+++||||||+|+++.+   .|+++|+||+||++|
T Consensus       151 ~i~T~~L~~~i~~~~~~~~~~~~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~---~~~~~wvywvgP~~G  227 (256)
T PLN00167        151 GVLTFGLVYTVYAAGDPRRGLLGAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG---SFKNQAVYWVGPLLG  227 (256)
T ss_pred             HHHHHHHHHHHHHhccccccCCCCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc---CccCcEEEeHHHHHH
Confidence            99999999999988774322 22367899999999999999999999999999999999875   688999999999999


Q ss_pred             HHHHHHHHHHhcCCchhhhccccc
Q 029946          159 TVIALWLFKLVVRPLAEEKKDSKS  182 (185)
Q Consensus       159 a~~a~~~~~~~~~~~~~~~~~~k~  182 (185)
                      +++++++|++++.+..+|..++..
T Consensus       228 a~l~a~~y~~l~~~~~~~~~~~~~  251 (256)
T PLN00167        228 GAVAGLLYDNVVFPTQDDRGSSTG  251 (256)
T ss_pred             HHHHHHHHHHHhCCCcCCCCCCcc
Confidence            999999999999887776665543

>PTZ00016 aquaglyceroporin; Provisional

Probab=100.00  E-value=1.9e-39  Score=268.78  Aligned_cols=168  Identities=18%  Similarity=0.243  Sum_probs=142.3

Q ss_pred             EeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC--------------------
Q 029946            4 FAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG--------------------   63 (185)
Q Consensus         4 i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--------------------   63 (185)
                      +++++++| |||+|||||++.++.|++  +|++.+.|+++|++|+++|++++|.++++..                    
T Consensus        98 i~~~g~iS-G~h~NPAVTla~~l~g~i--~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (294)
T PTZ00016         98 LLVSAGIS-GGHLNPAVTLGNAVFGKF--PWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGV  174 (294)
T ss_pred             HHHhcccC-cCccCHHHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccce
Confidence            46788999 999999999999999999  9999999999999999999999999876410                    


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCC-CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhC--
Q 029946           64 RGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPG-SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARG--  140 (185)
Q Consensus        64 ~~~~~~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~-~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~--  140 (185)
                      +.+.++.+..++++.|+++|++|+++++.+.+++.. .....|+.+|+.+..+.++.++.||+++||||||||+++..  
T Consensus       175 f~t~p~~s~~~a~~~E~i~T~iLv~~ila~~d~~~~~~~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~  254 (294)
T PTZ00016        175 FATYPREGNFYAIFSELILTAILLLVILAITDPNNCPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAIL  254 (294)
T ss_pred             eeCCCCccHHHHHHHHHHHHHHHHHHHHHhccCccCCCcCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHh
Confidence            011234677899999999999999999999875422 12357899999999999999999999999999999999862  


Q ss_pred             -CCCCcc----cchhHhhhhHHHHHHHHHHHHHhcCCch
Q 029946          141 -DHITKE----HILVYWLAPIQATVIALWLFKLVVRPLA  174 (185)
Q Consensus       141 -~~~~~~----~~~vy~v~p~~Ga~~a~~~~~~~~~~~~  174 (185)
                       +...|.    ++|+||+||++|+++++++|++++.+..
T Consensus       255 ~g~~~~~~~~~~~WVy~vgP~vGa~~aally~~ll~~~~  293 (294)
T PTZ00016        255 WGSEVFTKDNYYFWVPLVAPFVGAVLGMFLYDKFIPPLI  293 (294)
T ss_pred             ccccccCcCCceeeeeehHHHHHHHHHHHHHHHHhCCCC
Confidence             112343    6899999999999999999999987653

>PLN00183 putative aquaporin NIP7; Provisional

Probab=100.00  E-value=4.7e-38  Score=257.73  Aligned_cols=166  Identities=20%  Similarity=0.245  Sum_probs=144.7

Q ss_pred             EeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC--CCCCCCcchHHHHHHHHH
Q 029946            4 FAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG--RGPSLNVGIHHGALTEGL   81 (185)
Q Consensus         4 i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--~~~~~~~s~~~~~~~E~~   81 (185)
                      +++++++| |+|+|||+|++.++.|++  +|++.+.|+++|++|+++|+.+.+.+++...  ....+..+..++++.|++
T Consensus        93 i~~~g~vS-Gah~NPAvTla~~l~g~i--~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~p~~~~~~~~~~E~v  169 (274)
T PLN00183         93 VFSIGSIS-GAHVNPSVTIAFATFGHF--PWSKVPLYITAQTVGSVLATYVGVSVYGVKADLMTTKPAQGCSSAFWVEFI  169 (274)
T ss_pred             HHHhhccC-ccccCHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCcccHHHHHHHHHH
Confidence            45789999 999999999999999999  9999999999999999999999998886532  122334467899999999


Q ss_pred             HHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhhHHHHHH
Q 029946           82 LTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVI  161 (185)
Q Consensus        82 ~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p~~Ga~~  161 (185)
                      +|++|+++++...++++......++.+|+.+++.+++.+++||+++||||+|+|+++..   .|+++|+||++|++|+++
T Consensus       170 ~T~iLv~~i~~~~~~~~~~~~~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~~---~~~~~wvy~vapilGail  246 (274)
T PLN00183        170 ATFIVMFLAASLTSQPQSLGHLSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSW---DFKDIWIYITAPTIGAVA  246 (274)
T ss_pred             HHHHHHHhhheeeccccCCCCceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhCC---ChhheehHHHHHHHHHHH
Confidence            99999999998877532233456899999999999999999999999999999999864   799999999999999999


Q ss_pred             HHHHHHHhcCCchh
Q 029946          162 ALWLFKLVVRPLAE  175 (185)
Q Consensus       162 a~~~~~~~~~~~~~  175 (185)
                      ++++|++++.+...
T Consensus       247 aa~l~~~l~~~~~~  260 (274)
T PLN00183        247 GALMFHLLRLRTQP  260 (274)
T ss_pred             HHHHHHHHhccCCC
Confidence            99999999876654

>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.8e-38  Score=257.27  Aligned_cols=170  Identities=18%  Similarity=0.233  Sum_probs=147.2

Q ss_pred             EEEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-------------------
Q 029946            2 FLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI-------------------   62 (185)
Q Consensus         2 ~~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-------------------   62 (185)
                      +-+++-|+|| |||+|||||+++++.||+  +|+|.++|+++|++||++|++.+|.++.+.                   
T Consensus        79 ~gVyvag~iS-GgHlNPAVS~a~~~~g~~--p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAg  155 (316)
T KOG0224|consen   79 MGVYVAGRIS-GGHLNPAVSLAMCILGRL--PWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAG  155 (316)
T ss_pred             HHHHhhcccc-ccccCHHHHHHHHHhcCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceE
Confidence            4466789999 999999999999999999  999999999999999999999999998542                   


Q ss_pred             --CCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCC-CCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHh
Q 029946           63 --GRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIP-GSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYAR  139 (185)
Q Consensus        63 --~~~~~~~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~-~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~  139 (185)
                        ...|.+.++++++|+.|+++|.+|+.+++++.|++. ....+.|+.+|+.++++....+..||..+||||||+||+++
T Consensus       156 iFaTyP~p~ls~~n~F~DqfigTa~L~~~l~aI~D~rN~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~  235 (316)
T KOG0224|consen  156 IFATYPAPHLSLWNGFFDQFIGTAMLVLCLFAITDKRNPIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFT  235 (316)
T ss_pred             EEeecCchHhhhhHHHHHHHHHHHHHHhheeEEecCCCCCCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHH
Confidence              014677899999999999999999999999999643 34457899999999999999999999999999999999985


Q ss_pred             ---CC--C---CCcccchhHhhhhHHHHHHHHHHHHHhcCCch
Q 029946          140 ---GD--H---ITKEHILVYWLAPIQATVIALWLFKLVVRPLA  174 (185)
Q Consensus       140 ---~~--~---~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~  174 (185)
                         ++  +   ..-.+.|+.|++|++|+++++++|+++..-+.
T Consensus       236 ~~aGyG~~vF~~~~~~~WvPivgPl~Gai~G~~iY~~~Ig~h~  278 (316)
T KOG0224|consen  236 SIAGYGPEVFSAGHNWWWVPIVGPLIGAILGGWIYDFFIGFHI  278 (316)
T ss_pred             HHHhcchhhcccCCceeeeeehhhhhhhhhhhhhheeeeeccC
Confidence               21  1   11146799999999999999999999885543

>cd00333 MIP Major intrinsic protein (MIP) superfamily

Probab=100.00  E-value=8.1e-37  Score=245.58  Aligned_cols=163  Identities=25%  Similarity=0.379  Sum_probs=143.2

Q ss_pred             EeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC------C---------CCCCC
Q 029946            4 FAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI------G---------RGPSL   68 (185)
Q Consensus         4 i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~------~---------~~~~~   68 (185)
                      +++++++| |+|+|||+|++.++.|++  +|++.+.|+++|++|+++|+.+.+.+++++      .         +.|.+
T Consensus        49 ~~~~~~~s-ga~~NPa~t~~~~~~~~~--~~~~~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (228)
T cd00333          49 VYAVGHIS-GGHINPAVTLALAVGGRF--PLIRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSP  125 (228)
T ss_pred             HHHhccCC-CCeEcHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCC
Confidence            46788999 999999999999999999  999999999999999999999999987642      0         13455


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhhcCCCC--CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcc
Q 029946           69 NVGIHHGALTEGLLTFAIVTISLGLARKIPG--SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKE  146 (185)
Q Consensus        69 ~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~--~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~  146 (185)
                      +.+..++++.|+++|++|++.++...+++++  +....++.+|+.+.+..++.+++||+++|||||++++++.+....|+
T Consensus       126 ~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~  205 (228)
T cd00333         126 GVSNGNAFFVEFIGTFILVLVVFATTDDPNGPPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWH  205 (228)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHccccccCCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccc
Confidence            6788999999999999999999998875432  34467899999999999999999999999999999999876333599


Q ss_pred             cchhHhhhhHHHHHHHHHHHHHh
Q 029946          147 HILVYWLAPIQATVIALWLFKLV  169 (185)
Q Consensus       147 ~~~vy~v~p~~Ga~~a~~~~~~~  169 (185)
                      ++|+||++|++|+++++++|+++
T Consensus       206 ~~~vy~vap~lGai~aa~l~~~~  228 (228)
T cd00333         206 YFWVYWVGPLIGAIAGALVYDYV  228 (228)
T ss_pred             eeehhhhHHHHHHHHHHHHHHhC
Confidence            99999999999999999999863

Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.

>TIGR00861 MIP MIP family channel proteins

Probab=100.00  E-value=3.2e-36  Score=240.28  Aligned_cols=160  Identities=22%  Similarity=0.269  Sum_probs=138.8

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC----C---CCCCCcchHHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG----R---GPSLNVGIHHG   75 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~----~---~~~~~~s~~~~   75 (185)
                      .+++++++| |+|+|||+|++.++.|++  +|++.+.|+++|++|+++|+.+.+.++++..    .   .+.++.+..++
T Consensus        48 ~~~~~~~~s-g~h~NPavt~~~~l~~~~--~~~~~~~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
T TIGR00861        48 LVYCVGGIS-GAHLNPAVTIALLLGRRF--PLKRVPVYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQA  124 (216)
T ss_pred             HHHHHhccc-ccccCHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHH
Confidence            356778999 999999999999999999  9999999999999999999999999887531    1   12345688999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCC--CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhh
Q 029946           76 ALTEGLLTFAIVTISLGLARKIPG--SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWL  153 (185)
Q Consensus        76 ~~~E~~~Tf~lv~~i~~~~~~~~~--~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v  153 (185)
                      ++.|+++|++|+++++...+++++  +....++.+|+.+....+..+++||+++||||+++++++++ ...|+++|+||+
T Consensus       125 ~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~-~~~~~~~~vy~v  203 (216)
T TIGR00861       125 FFVEFIGTAILVLVIFATTDPRNRVPRGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAG-LAGWGNHWVYWV  203 (216)
T ss_pred             HHHHHHHHHHHHHHHheeecCCCCCCCCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhc-cccccceeHHHH
Confidence            999999999999999988774322  22368999999999999999999999999999999999875 246899999999


Q ss_pred             hhHHHHHHHHHHH
Q 029946          154 APIQATVIALWLF  166 (185)
Q Consensus       154 ~p~~Ga~~a~~~~  166 (185)
                      +|++|+++++.+|
T Consensus       204 ap~~Ga~~a~~~y  216 (216)
T TIGR00861       204 GPIIGAILGALVY  216 (216)
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999998775

processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.

>PLN00026 aquaporin NIP; Provisional

Probab=99.74  E-value=1.2e-17  Score=138.48  Aligned_cols=106  Identities=17%  Similarity=0.249  Sum_probs=87.9

Q ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHHhhc-CC-CC--Ccch-hHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhC
Q 029946           66 PSLNVGIHHGALTEGLLTFAIVTISLGLAR-KI-PG--SFYM-KTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARG  140 (185)
Q Consensus        66 ~~~~~s~~~~~~~E~~~Tf~lv~~i~~~~~-~~-~~--~~~~-~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~  140 (185)
                      +..+.+.++.++.|+++||+|++++++... ++ .+  .... .++.+|+++++.+++.+++||+|+||||++++++..+
T Consensus        64 ~~~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~  143 (298)
T PLN00026         64 PPPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRH  143 (298)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCC
Confidence            344667789999999999999999997533 21 11  1122 3579999999999999999999999999999999753


Q ss_pred             CCCCcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946          141 DHITKEHILVYWLAPIQATVIALWLFKLVVRPL  173 (185)
Q Consensus       141 ~~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~  173 (185)
                        ..|.+.|+||++|++|+++|+++++.++.+.
T Consensus       144 --~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~  174 (298)
T PLN00026        144 --FPWKHVPAYIAAQVSASICASFALKGVFHPF  174 (298)
T ss_pred             --CcHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence              5799999999999999999999999998653

>PLN00184 aquaporin NIP1; Provisional

Probab=99.73  E-value=2.7e-17  Score=136.52  Aligned_cols=103  Identities=14%  Similarity=0.173  Sum_probs=85.2

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhhcC-CCC--Ccch--hHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCC
Q 029946           69 NVGIHHGALTEGLLTFAIVTISLGLARK-IPG--SFYM--KTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHI  143 (185)
Q Consensus        69 ~~s~~~~~~~E~~~Tf~lv~~i~~~~~~-~~~--~~~~--~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~  143 (185)
                      +.+..+.++.|+++||+|++++++.... ..+  ....  .++.+|+++++.+++.+++||+|+||||++++++..+  .
T Consensus        50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~--~  127 (296)
T PLN00184         50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGR--F  127 (296)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCC--C
Confidence            3456789999999999999999987631 111  1112  3467799999999999999999999999999999643  4


Q ss_pred             CcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946          144 TKEHILVYWLAPIQATVIALWLFKLVVRPL  173 (185)
Q Consensus       144 ~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~  173 (185)
                      .|.+.|+||++|++|+++|+++++.++...
T Consensus       128 ~~~~~~~YiiaQllGA~lga~~~~~l~~~~  157 (296)
T PLN00184        128 PLKQVPAYVISQVIGSTLAAATLRLLFGLD  157 (296)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence            799999999999999999999999988643

>PLN00166 aquaporin TIP2; Provisional

Probab=99.68  E-value=3.3e-16  Score=127.42  Aligned_cols=101  Identities=22%  Similarity=0.295  Sum_probs=84.4

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcC----C--CC--C-cc-hhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHh
Q 029946           70 VGIHHGALTEGLLTFAIVTISLGLARK----I--PG--S-FY-MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYAR  139 (185)
Q Consensus        70 ~s~~~~~~~E~~~Tf~lv~~i~~~~~~----~--~~--~-~~-~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~  139 (185)
                      .+..+.++.|+++||+|+++.++...+    .  ++  . .. ..++.+|+.+++.+++.+++||+|+||||++++.+..
T Consensus        15 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g   94 (250)
T PLN00166         15 VASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGG   94 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhC
Confidence            456788999999999999999988542    1  10  1 11 2467899999999999999999999999999999963


Q ss_pred             CCCCCcccchhHhhhhHHHHHHHHHHHHHhcCC
Q 029946          140 GDHITKEHILVYWLAPIQATVIALWLFKLVVRP  172 (185)
Q Consensus       140 ~~~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~  172 (185)
                        ...|.+.|+||++|++|+++++.+++.++.+
T Consensus        95 --~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~  125 (250)
T PLN00166         95 --NITIITGFFYWIAQCLGSIVACLLLVFVTNG  125 (250)
T ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence              3478899999999999999999999988754

>PLN00183 putative aquaporin NIP7; Provisional

Probab=99.67  E-value=4e-16  Score=128.32  Aligned_cols=103  Identities=15%  Similarity=0.157  Sum_probs=86.7

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhhcCC-C-CC-cch--hHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCC
Q 029946           69 NVGIHHGALTEGLLTFAIVTISLGLARKI-P-GS-FYM--KTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHI  143 (185)
Q Consensus        69 ~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~-~-~~-~~~--~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~  143 (185)
                      +.+.++.++.|+++||+++++++....++ . ++ ...  .++.+|+++++.+++.+++||+|+||||++++++..+  .
T Consensus        41 ~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~--i  118 (274)
T PLN00183         41 DLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGH--F  118 (274)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcC--C
Confidence            56778999999999999999999876532 1 11 112  4578999999999999999999999999999999743  4


Q ss_pred             CcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946          144 TKEHILVYWLAPIQATVIALWLFKLVVRPL  173 (185)
Q Consensus       144 ~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~  173 (185)
                      .|.+.|+||++|++|+++|+.+++.++...
T Consensus       119 ~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~  148 (274)
T PLN00183        119 PWSKVPLYITAQTVGSVLATYVGVSVYGVK  148 (274)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            788999999999999999999998887653

>PLN00167 aquaporin TIP5; Provisional

Probab=99.65  E-value=1e-15  Score=124.93  Aligned_cols=102  Identities=22%  Similarity=0.361  Sum_probs=85.9

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhhcCC----CCC------cchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHH
Q 029946           69 NVGIHHGALTEGLLTFAIVTISLGLARKI----PGS------FYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYA  138 (185)
Q Consensus        69 ~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~----~~~------~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~  138 (185)
                      ..+.++.++.|+++||+|+++.++...++    +++      ....++.+|+.+++.+++.+++||+|+|||+++++.+.
T Consensus        18 ~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~   97 (256)
T PLN00167         18 TRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVG   97 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHh
Confidence            34567899999999999999999886521    111      12467999999999999999999999999999999996


Q ss_pred             hCCCCCcccchhHhhhhHHHHHHHHHHHHHhcCC
Q 029946          139 RGDHITKEHILVYWLAPIQATVIALWLFKLVVRP  172 (185)
Q Consensus       139 ~~~~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~  172 (185)
                      .+  ..|.+.|+||++|++|+++++.+++.++..
T Consensus        98 g~--~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~  129 (256)
T PLN00167         98 GH--ISVPTAMFYWISQMLASVMACLFLKVTTVG  129 (256)
T ss_pred             CC--CcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence            43  578999999999999999999999888654

>PTZ00016 aquaglyceroporin; Provisional

Probab=99.64  E-value=1.2e-15  Score=126.76  Aligned_cols=103  Identities=16%  Similarity=0.150  Sum_probs=85.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCCC--C---CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCc
Q 029946           71 GIHHGALTEGLLTFAIVTISLGLARKIP--G---SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITK  145 (185)
Q Consensus        71 s~~~~~~~E~~~Tf~lv~~i~~~~~~~~--~---~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~  145 (185)
                      +..+.++.|+++|++++++.++...+..  +   +....++.+|+.+++.+++.+++||+|+|||+++++.+..+  ..|
T Consensus        48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~--i~~  125 (294)
T PTZ00016         48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGK--FPW  125 (294)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhcc--CCH
Confidence            4568899999999999999988764311  1   11234678999999999999999999999999999999644  579


Q ss_pred             ccchhHhhhhHHHHHHHHHHHHHhcCCchh
Q 029946          146 EHILVYWLAPIQATVIALWLFKLVVRPLAE  175 (185)
Q Consensus       146 ~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~~  175 (185)
                      .+.|.||++|++|+++|+.+.+.++++..+
T Consensus       126 ~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~  155 (294)
T PTZ00016        126 KKLPGYFVAQLLGAFVGAACVYGLYYGFFK  155 (294)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence            999999999999999999999888876544

>PLN00182 putative aquaporin NIP4; Provisional

Probab=99.64  E-value=1.5e-15  Score=125.30  Aligned_cols=101  Identities=16%  Similarity=0.189  Sum_probs=83.8

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcC-C-C-CC-c-chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCC
Q 029946           70 VGIHHGALTEGLLTFAIVTISLGLARK-I-P-GS-F-YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHIT  144 (185)
Q Consensus        70 ~s~~~~~~~E~~~Tf~lv~~i~~~~~~-~-~-~~-~-~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~  144 (185)
                      .+..+.++.|+++||+|+++.++.... + . ++ . ....+.+|+.++..+++.+++||+|+|||+++++++..+  .+
T Consensus        39 ~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~--~~  116 (283)
T PLN00182         39 VCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRR--FP  116 (283)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcC--CC
Confidence            356688999999999999999987542 1 1 11 1 122468999999999999999999999999999999754  57


Q ss_pred             cccchhHhhhhHHHHHHHHHHHHHhcCC
Q 029946          145 KEHILVYWLAPIQATVIALWLFKLVVRP  172 (185)
Q Consensus       145 ~~~~~vy~v~p~~Ga~~a~~~~~~~~~~  172 (185)
                      |.+.|+||++|++|+++|+++.+.++..
T Consensus       117 ~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~  144 (283)
T PLN00182        117 WYQVPLYIGAQLTGSLLASLTLRLMFNV  144 (283)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999888743

>cd00333 MIP Major intrinsic protein (MIP) superfamily

Probab=99.63  E-value=1.2e-15  Score=122.69  Aligned_cols=100  Identities=20%  Similarity=0.189  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCC--C---Cc-chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccc
Q 029946           75 GALTEGLLTFAIVTISLGLARKIP--G---SF-YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHI  148 (185)
Q Consensus        75 ~~~~E~~~Tf~lv~~i~~~~~~~~--~---~~-~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~  148 (185)
                      .++.|+++|++++++.++...+..  +   .+ ...++.+|+.+...+++.+++||+|+|||+++++.+..+  .+|.+.
T Consensus         2 ~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~--~~~~~~   79 (228)
T cd00333           2 KYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGR--FPLIRV   79 (228)
T ss_pred             hhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCC--CCHHHH
Confidence            478899999999999998865311  1   11 245789999999999999999999999999999999754  479999


Q ss_pred             hhHhhhhHHHHHHHHHHHHHhcCCchhh
Q 029946          149 LVYWLAPIQATVIALWLFKLVVRPLAEE  176 (185)
Q Consensus       149 ~vy~v~p~~Ga~~a~~~~~~~~~~~~~~  176 (185)
                      |+||++|++|+++++.+++.++.++.++
T Consensus        80 ~~y~~aq~~Ga~~~~~~~~~~~~~~~~~  107 (228)
T cd00333          80 IPYIIAQLLGAILGAALLYGLYYGLYLE  107 (228)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHhh
Confidence            9999999999999999999988876553

Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.

>PRK05420 aquaporin Z; Provisional

Probab=99.62  E-value=4.3e-15  Score=119.70  Aligned_cols=98  Identities=18%  Similarity=0.219  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcC--C-CC-C-cch-hHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcc
Q 029946           73 HHGALTEGLLTFAIVTISLGLARK--I-PG-S-FYM-KTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKE  146 (185)
Q Consensus        73 ~~~~~~E~~~Tf~lv~~i~~~~~~--~-~~-~-~~~-~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~  146 (185)
                      .+.++.|+++|++|+++.+.....  + ++ + ... .++.+|+++++.+++.+++||+|+|||+++++.+..  ..+|.
T Consensus         2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~--~i~~~   79 (231)
T PRK05420          2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGG--RFPAK   79 (231)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhC--CCCHH
Confidence            478899999999999998876431  1 11 1 122 368999999999999999999999999999999973  35799


Q ss_pred             cchhHhhhhHHHHHHHHHHHHHhcCC
Q 029946          147 HILVYWLAPIQATVIALWLFKLVVRP  172 (185)
Q Consensus       147 ~~~vy~v~p~~Ga~~a~~~~~~~~~~  172 (185)
                      +.|.||++|++|+++++.+.+.++.+
T Consensus        80 ~~~~Y~~aQ~lGa~~ga~l~~~~~~~  105 (231)
T PRK05420         80 ELVPYIIAQVVGGIAAAAVLYLIASG  105 (231)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999877777654

>PLN00027 aquaporin TIP; Provisional

Probab=99.62  E-value=3.9e-15  Score=121.39  Aligned_cols=100  Identities=22%  Similarity=0.293  Sum_probs=82.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhc------CCCC--C-c-chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhC
Q 029946           71 GIHHGALTEGLLTFAIVTISLGLAR------KIPG--S-F-YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARG  140 (185)
Q Consensus        71 s~~~~~~~E~~~Tf~lv~~i~~~~~------~~~~--~-~-~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~  140 (185)
                      ...+.++.|+++|++|+++.++...      ++.+  . . ...++.+|+.+++.+++.+++||+|+||||++++.+.. 
T Consensus        18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g-   96 (252)
T PLN00027         18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGG-   96 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhC-
Confidence            3568899999999999999997742      1111  1 1 14579999999999999999999999999999999843 


Q ss_pred             CCCCcccchhHhhhhHHHHHHHHHHHHHhcCC
Q 029946          141 DHITKEHILVYWLAPIQATVIALWLFKLVVRP  172 (185)
Q Consensus       141 ~~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~  172 (185)
                       ...|.+.|+||++|++|+++++.+++.+...
T Consensus        97 -~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~  127 (252)
T PLN00027         97 -NITLLRGILYWIAQLLGSVVACLLLKFSTGG  127 (252)
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence             3478899999999999999999999877643

>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]

Probab=99.57  E-value=1.5e-14  Score=116.18  Aligned_cols=106  Identities=18%  Similarity=0.135  Sum_probs=88.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhc----CCCCC---cc-hhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCC
Q 029946           71 GIHHGALTEGLLTFAIVTISLGLAR----KIPGS---FY-MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDH  142 (185)
Q Consensus        71 s~~~~~~~E~~~Tf~lv~~i~~~~~----~~~~~---~~-~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~  142 (185)
                      +..+-++.|+++|++|++...++..    ++.++   .. ...+.+|+.+++.+++.+++||+|+|||++++.++..+  
T Consensus         3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~--   80 (241)
T COG0580           3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGR--   80 (241)
T ss_pred             cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCC--
Confidence            4456689999999999999887754    12111   12 24689999999999999999999999999999999655  


Q ss_pred             CCcccchhHhhhhHHHHHHHHHHHHHhcCCchhhhc
Q 029946          143 ITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKK  178 (185)
Q Consensus       143 ~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~~~~~  178 (185)
                      .+|.+...||++|++|+++++.+...++.++.++.|
T Consensus        81 fp~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~  116 (241)
T COG0580          81 FPWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETE  116 (241)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhc
Confidence            589999999999999999999999999988887666

>TIGR00861 MIP MIP family channel proteins

Probab=99.54  E-value=3.4e-14  Score=113.40  Aligned_cols=95  Identities=21%  Similarity=0.246  Sum_probs=80.2

Q ss_pred             HHHHHHHHHHHHHHHhhcC---CC--CC-----cchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCccc
Q 029946           78 TEGLLTFAIVTISLGLARK---IP--GS-----FYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEH  147 (185)
Q Consensus        78 ~E~~~Tf~lv~~i~~~~~~---~~--~~-----~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~  147 (185)
                      .|+++|++|+++.+....+   ++  ++     ....++.+|+.+...+++.+++||+|+|||+++++.+..+  .+|.+
T Consensus         1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~--~~~~~   78 (216)
T TIGR00861         1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRR--FPLKR   78 (216)
T ss_pred             CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCC--CCHHH
Confidence            4999999999999988653   11  11     1235789999999999999999999999999999999754  47999


Q ss_pred             chhHhhhhHHHHHHHHHHHHHhcCCch
Q 029946          148 ILVYWLAPIQATVIALWLFKLVVRPLA  174 (185)
Q Consensus       148 ~~vy~v~p~~Ga~~a~~~~~~~~~~~~  174 (185)
                      .|+||++|++|+++++.+++.++.+..
T Consensus        79 ~~~y~~aQ~~Ga~~~~~~~~~~~~~~~  105 (216)
T TIGR00861        79 VPVYIVAQLIGAILGAALLYGLTSGLF  105 (216)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccccc
Confidence            999999999999999999998887653

processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.

>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]

Probab=99.52  E-value=2.8e-14  Score=116.57  Aligned_cols=103  Identities=17%  Similarity=0.177  Sum_probs=86.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcC-----CCCCcch-hHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCC
Q 029946           71 GIHHGALTEGLLTFAIVTISLGLARK-----IPGSFYM-KTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHIT  144 (185)
Q Consensus        71 s~~~~~~~E~~~Tf~lv~~i~~~~~~-----~~~~~~~-~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~  144 (185)
                      ...+.+++||++|++|++..+++..+     ...+... .-+.+|+.++..+++.+.+||+|+|||++++..++.+  .+
T Consensus        30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~--~p  107 (316)
T KOG0224|consen   30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGR--LP  107 (316)
T ss_pred             HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcC--CC
Confidence            46788999999999999998887652     1223322 2488999999999999999999999999999999865  58


Q ss_pred             cccchhHhhhhHHHHHHHHHHHHHhcCCchh
Q 029946          145 KEHILVYWLAPIQATVIALWLFKLVVRPLAE  175 (185)
Q Consensus       145 ~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~~  175 (185)
                      |.++.+|.++|++||.+++......+.+...
T Consensus       108 ~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~  138 (316)
T KOG0224|consen  108 WKKFPVYVLAQFIGAFLGAATVYGLYYDAIN  138 (316)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999887777766554

>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]

Probab=99.50  E-value=1.3e-13  Score=111.03  Aligned_cols=103  Identities=19%  Similarity=0.221  Sum_probs=88.3

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhhcCCC-----CCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCC
Q 029946           69 NVGIHHGALTEGLLTFAIVTISLGLARKIP-----GSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHI  143 (185)
Q Consensus        69 ~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~-----~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~  143 (185)
                      ..+.+|..+.||++|++++++.+......+     .......+..|+++++.+++.+++||+|+|||++++..+..+  .
T Consensus         7 ~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~--i   84 (238)
T KOG0223|consen    7 SVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGK--I   84 (238)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCC--C
Confidence            456789999999999999999998876221     112235689999999999999999999999999999888644  6


Q ss_pred             CcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946          144 TKEHILVYWLAPIQATVIALWLFKLVVRPL  173 (185)
Q Consensus       144 ~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~  173 (185)
                      ++.+...||++|++|+++++.+.+.+.+.+
T Consensus        85 sl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~  114 (238)
T KOG0223|consen   85 SLFRAVAYIVAQLLGAIAGAALLKVVTPGQ  114 (238)
T ss_pred             cHHHhHHHHHHHHHHHHHHHHHHheecCcc
Confidence            888999999999999999999999998885

>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]

Probab=99.40  E-value=7.6e-13  Score=106.11  Aligned_cols=102  Identities=19%  Similarity=0.171  Sum_probs=82.2

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhc---CCCCC-------c-chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHH
Q 029946           70 VGIHHGALTEGLLTFAIVTISLGLAR---KIPGS-------F-YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYA  138 (185)
Q Consensus        70 ~s~~~~~~~E~~~Tf~lv~~i~~~~~---~~~~~-------~-~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~  138 (185)
                      .+.+|.++.|+++|+++++..+....   +...+       . ....+..|+.+...+++.+++||+|+|||.+++..+.
T Consensus         5 ~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~   84 (227)
T PF00230_consen    5 PSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFALT   84 (227)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhheeee
Confidence            45789999999999999999887532   11111       1 1234667889999999999999999999999998886


Q ss_pred             hCCCCCcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946          139 RGDHITKEHILVYWLAPIQATVIALWLFKLVVRPL  173 (185)
Q Consensus       139 ~~~~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~  173 (185)
                      .+  .+|.+...|+++|++|+++|+.+.+.++++.
T Consensus        85 g~--~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~  117 (227)
T PF00230_consen   85 GR--ISWKKAIVYIIAQFLGAFLGALLVYALYPDS  117 (227)
T ss_dssp             TS--SSHHHHHHHHHHHHHHHHHHHHHHHHHSTHH
T ss_pred             ee--ecccceeeEEeeccccccccccchhhcccCc
Confidence            43  5888999999999999999999999888774

These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....

>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate

Probab=84.99  E-value=31  Score=31.59  Aligned_cols=115  Identities=17%  Similarity=0.138  Sum_probs=67.9

Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhHHH
Q 029946           28 GDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWI  107 (185)
Q Consensus        28 g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~~~~~~~~~  107 (185)
                      ...+++.+....++...++|+.+|....+.++|.-.       + ..    ++...+...+...+....+|+   .....
T Consensus       380 a~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~~~-------~-f~----~L~l~l~~~l~~~~~~~~~p~---~~~~g  444 (650)
T PF04632_consen  380 ATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPHLD-------G-FP----LLALVLAPFLFLGGLLMARPR---TAYIG  444 (650)
T ss_pred             cCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-------c-HH----HHHHHHHHHHHHHHHHHcCch---HHHHH
Confidence            333558899999999999999999999999998731       1 11    111111111212222222333   33445


Q ss_pred             HHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhhHHHHHHHHHHHHHhcCCch
Q 029946          108 SSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLA  174 (185)
Q Consensus       108 igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~  174 (185)
                      .++.+...... .+......|++.-+-     +           .++.++|.+++.+.++.+.+...
T Consensus       445 ~~~~v~f~~~~-~~~n~~~~d~~~f~n-----~-----------~la~l~G~~~a~l~~~li~p~~~  494 (650)
T PF04632_consen  445 LGFAVFFLLLL-GPGNPYSYDFATFLN-----R-----------ALAILLGIVIAALVFRLIRPFSP  494 (650)
T ss_pred             HHHHHHHHHHh-cCCCCCCCCHHHHHH-----H-----------HHHHHHHHHHHHHHHHHHCCCCh
Confidence            55555444433 333345556553221     1           56778999999999998877664

It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	185
2b6o_A	263	Aquaporin-0, lens fiber major intrinsic protein; a	2e-10
3iyz_A	340	Aquaporin-4; water transport, water channel, two-d	2e-10
3cn5_A	304	Aquaporin; membrane protein, transmembrane, transp	2e-10
1j4n_A	271	Aquaporin 1; membrane protein, channel protein, tr	3e-10
2zz9_A	301	Aquaporin-4; water transport, water channel, two-d	3e-10
3d9s_A	266	Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro	2e-09
2w2e_A	279	AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating	8e-09
3gd8_A	223	Aquaporin-4; proton exclusion, structural genomics	9e-09
2o9g_A	234	Aquaporin Z; integral membrane protein, structural	6e-08
3llq_A	256	Aquaporin Z 2; aquaporin tetramer, membrane protei	2e-07
2f2b_A	246	Aquaporin AQPM; protein, integral membrane protein	1e-06

>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Length = 263

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 33/177 (18%), Positives = 56/177 (31%), Gaps = 12/177 (6%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITG---VRFILDTFPQIGRG---P 66
           G   NP    A  +    S  L      + AQ++G++ G   +  +     +        
Sbjct: 64  GAHVNPAVTFAFLVGSQMS--LLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTL 121

Query: 67  SLNVGIHHGALTEGLLTFAIVTISLGLA-RKIPGSFYMKTWISSVSKLALHILGSDMTGG 125
              V +    + E  LT   V         +  G           S    H+ G   TG 
Sbjct: 122 HPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGA 181

Query: 126 CMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDSKS 182
            MNPA     A    +     +  VYW+ P+    +   L+  ++ P  +   +  S
Sbjct: 182 GMNPARSFAPAILTRNF---TNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLS 235

>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Length = 340

 Score = 57.5 bits (139), Expect = 2e-10
 Identities = 47/177 (26%), Positives = 68/177 (38%), Gaps = 12/177 (6%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITG---VRFILDTFPQIGRG---P 66
           GG  NP   +A   +   S  +      I AQ +G+I G   +  +       G G    
Sbjct: 110 GGHINPAVTVAMVCTRKIS--IAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTV 167

Query: 67  SLNVGIHHGALTEGLLTFAIVTISLGLA-RKIPGSFYMKTWISSVSKLALHILGSDMTGG 125
             N+   HG L E ++TF +V         K              S    H+   + TG 
Sbjct: 168 HGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGA 227

Query: 126 CMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDSKS 182
            MNPA   G A   G+    E+  +YW+ PI   V+A  L++ V  P  E K+  K 
Sbjct: 228 SMNPARSFGPAVIMGNW---ENHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKE 281

>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Length = 304

 Score = 57.0 bits (138), Expect = 2e-10
 Identities = 32/176 (18%), Positives = 59/176 (33%), Gaps = 14/176 (7%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITG---VRFILDTFPQIGRG---- 65
           GG  NP       ++      L      + AQ +G+I G   V+  +        G    
Sbjct: 120 GGHINPAVTFGLFLARKVE--LLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANS 177

Query: 66  PSLNVGIHHGALTEGLLTFAIVTISLGLA-RKIPGSFYMKTWISSV----SKLALHILGS 120
            +L          E + TF +V         K          ++ +    +   +H+   
Sbjct: 178 VALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATI 237

Query: 121 DMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEE 176
            +TG  +NPA   G A     +   +   ++W+ P     +A    + V+R  A +
Sbjct: 238 PITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAAAIK 293

>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A Length = 271

 Score = 56.6 bits (137), Expect = 3e-10
 Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 12/174 (6%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITG---VRFILDTFPQIGRG---P 66
           G   NP   L   +S   S  +      I AQ +G+I     +  I  + P    G    
Sbjct: 74  GAHLNPAVTLGLLLSCQIS--VLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNAL 131

Query: 67  SLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLAL-HILGSDMTGG 125
           +  V    G   E + T  +V   L    +          ++    +AL H+L  D TG 
Sbjct: 132 APGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVALGHLLAIDYTGC 191

Query: 126 CMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKD 179
            +NPA   G +    +    +   ++W+ P     +A+ ++  ++ P + +  D
Sbjct: 192 GINPARSFGSSVITHNF---QDHWIFWVGPFIGAALAVLIYDFILAPRSSDLTD 242

>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Length = 301

 Score = 56.7 bits (137), Expect = 3e-10
 Identities = 47/177 (26%), Positives = 68/177 (38%), Gaps = 12/177 (6%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITG---VRFILDTFPQIGRG---P 66
           GG  NP   +A   +   S  +      I AQ +G+I G   +  +       G G    
Sbjct: 71  GGHINPAVTVAMVCTRKIS--IAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTV 128

Query: 67  SLNVGIHHGALTEGLLTFAIVTISLGLA-RKIPGSFYMKTWISSVSKLALHILGSDMTGG 125
             N+   HG L E ++TF +V         K              S    H+   + TG 
Sbjct: 129 HGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGA 188

Query: 126 CMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDSKS 182
            MNPA   G A   G+    E+  +YW+ PI   V+A  L++ V  P  E K+  K 
Sbjct: 189 SMNPARSFGPAVIMGNW---ENHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKE 242

>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Length = 266

 Score = 54.7 bits (132), Expect = 2e-09
 Identities = 39/177 (22%), Positives = 63/177 (35%), Gaps = 17/177 (9%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITG---VRFILDTFPQIGRG---P 66
           GG  NP   LA  +    S  L      + AQ++G+I G   +  +     +        
Sbjct: 66  GGHINPAITLALLVGNQIS--LLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNAL 123

Query: 67  SLNVGIHHGALTEGLLTFAIVTISLGLA----RKIPGSFYMKTWISSVSKLALHILGSDM 122
           + N       + E +LTF +                GS  +   +S       H++G   
Sbjct: 124 NNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVT---LGHLVGIYF 180

Query: 123 TGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKD 179
           TG  MNPA   G A             V+W+ PI   V+A  L+  ++ P +    +
Sbjct: 181 TGCSMNPARSFGPAVVMNR--FSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSE 235

>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A* Length = 279

 Score = 52.8 bits (127), Expect = 8e-09
 Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 7/167 (4%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITG---VRFILDTFPQIGRGPSLN 69
           GG  NP   LA  ++       F        Q++  +        +              
Sbjct: 108 GGNLNPAVTLALVLARAIP--PFRGILMAFTQIVAGMAAAGAASAMTPGEIAFANALGGG 165

Query: 70  VGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNP 129
                G   E   T  +    L LA +   + +   ++  ++ L  H++    TG  +NP
Sbjct: 166 ASRTRGLFLEAFGTAILCLTVLMLAVEKHRATWFAPFVIGIALLIAHLICIYYTGAGLNP 225

Query: 130 ASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEE 176
           A   G A A        +  +YWL PI    +A  ++++      + 
Sbjct: 226 ARSFGPAVAARSF--PNYHWIYWLGPILGAFLAYSIWQMWKWLNYQT 270

>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens} Length = 223

 Score = 52.2 bits (126), Expect = 9e-09
 Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 14/168 (8%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITG---VRFILDTFPQIGRG---P 66
           GG  NP   +A   +   S  +      I AQ +G+I G   +  +       G G    
Sbjct: 62  GGHINPAVTVAMVCTRKIS--IAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMV 119

Query: 67  SLNVGIHHGALTEGLLTFAIVTISLGLA--RKIPGSFYMKTWISSVSKLALHILGSDMTG 124
             N+   HG L E ++TF +V         ++   +  +   I   S    H+   + TG
Sbjct: 120 HGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIG-FSVAIGHLFAINYTG 178

Query: 125 GCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 172
             MNPA   G A   G+    E+  +YW+ PI   V+A  L++ V  P
Sbjct: 179 ASMNPARSFGPAVIMGNW---ENHWIYWVGPIIGAVLAGGLYEYVFCP 223

>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Length = 234

 Score = 49.9 bits (120), Expect = 6e-08
 Identities = 31/176 (17%), Positives = 60/176 (34%), Gaps = 21/176 (11%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITG---VRFILDTFPQIGRGPSL- 68
           GG +NP   +     G F      V   + AQV+G I     +  I           S  
Sbjct: 62  GGHFNPAVTIGLWAGGRFP--AKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGF 119

Query: 69  -----------NVGIHHGALTEGLLTFAIVTISLGLA-RKIPGSFYMKTWISSVSKLALH 116
                         +    + E +L+   + +  G   +  P  F        ++   +H
Sbjct: 120 ASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFA--PIAIGLACTLIH 177

Query: 117 ILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 172
           ++   +T   +NPA     A  +G     E +  +W+ PI   +I   +++ ++  
Sbjct: 178 LISIPVTNTSVNPARSTAVAIFQGGW-ALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232

>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str} Length = 256

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 37/181 (20%), Positives = 62/181 (34%), Gaps = 33/181 (18%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITG---VRFILDTFPQIGRG---- 65
           GG +NP   +   ++G F     ++   + AQV G+I     +  I      I  G    
Sbjct: 87  GGHFNPAVSVGLTVAGRFP--ASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFAS 144

Query: 66  ------PSLNVGIHHGALTEGLLTFAIVTISLGLA--RKIPGS------FYMKTWISSVS 111
                       +    L E +LT   + + LG    R   G                 +
Sbjct: 145 NGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVPAGFAPIAIGL---------A 195

Query: 112 KLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVR 171
              +H++   +T   +NPA   G A   G     + + ++WLAPI        ++KL   
Sbjct: 196 LTLIHLISIPVTNTSVNPARSTGQALFVGGW-ALQQLWLFWLAPIVGGAAGAVIWKLFGE 254

Query: 172 P 172
            
Sbjct: 255 K 255

>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A* Length = 246

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 17/171 (9%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITG---VRFILDTFPQIGRG---- 65
           G   NP   +       F      V   I AQ++G+  G                G    
Sbjct: 78  GCHINPAVTIGLWSVKKFP--GREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGAT 135

Query: 66  -PSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTG 124
            P   +      L E + TF ++   +G+A            I  ++   +     +++G
Sbjct: 136 APFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKGFAGIIIGLTVAGIITTLGNISG 195

Query: 125 GCMNPA-----SVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVV 170
             +NPA      +    +A  D     +  +Y + PI   V+A   ++ + 
Sbjct: 196 SSLNPARTFGPYLNDMIFAGTDLWN--YYSIYVIGPIVGAVLAALTYQYLT 244

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	185
3iyz_A	340	Aquaporin-4; water transport, water channel, two-d	100.0
2w2e_A	279	AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating	100.0
3gd8_A	223	Aquaporin-4; proton exclusion, structural genomics	100.0
2zz9_A	301	Aquaporin-4; water transport, water channel, two-d	100.0
2b6o_A	263	Aquaporin-0, lens fiber major intrinsic protein; a	100.0
3d9s_A	266	Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro	100.0
1j4n_A	271	Aquaporin 1; membrane protein, channel protein, tr	100.0
2f2b_A	246	Aquaporin AQPM; protein, integral membrane protein	100.0
2o9g_A	234	Aquaporin Z; integral membrane protein, structural	100.0
1ldf_A	281	Glycerol uptake facilitator protein; glycerol-cond	100.0
3cn5_A	304	Aquaporin; membrane protein, transmembrane, transp	100.0
3llq_A	256	Aquaporin Z 2; aquaporin tetramer, membrane protei	100.0
3c02_A	258	Aquaglyceroporin; membrane protein, glycerol, wate	100.0
2b6o_A	263	Aquaporin-0, lens fiber major intrinsic protein; a	99.68
3llq_A	256	Aquaporin Z 2; aquaporin tetramer, membrane protei	99.6
3c02_A	258	Aquaglyceroporin; membrane protein, glycerol, wate	99.6
3d9s_A	266	Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro	99.59
1ldf_A	281	Glycerol uptake facilitator protein; glycerol-cond	99.58
2zz9_A	301	Aquaporin-4; water transport, water channel, two-d	99.58
3cn5_A	304	Aquaporin; membrane protein, transmembrane, transp	99.58
3gd8_A	223	Aquaporin-4; proton exclusion, structural genomics	99.56
1j4n_A	271	Aquaporin 1; membrane protein, channel protein, tr	99.56
2o9g_A	234	Aquaporin Z; integral membrane protein, structural	99.56
2f2b_A	246	Aquaporin AQPM; protein, integral membrane protein	99.55
3iyz_A	340	Aquaporin-4; water transport, water channel, two-d	99.55
2w2e_A	279	AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating	99.54

>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}

Probab=100.00  E-value=2.6e-45  Score=305.68  Aligned_cols=168  Identities=26%  Similarity=0.322  Sum_probs=149.6

Q ss_pred             EEEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------CCCCCCcchHHH
Q 029946            2 FLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG------RGPSLNVGIHHG   75 (185)
Q Consensus         2 ~~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~------~~~~~~~s~~~~   75 (185)
                      ..++++|+|| |||+|||||+++++.|++  +|++++.|+++|++||++|+++++.++++..      +.+.++.+..++
T Consensus       100 ~~v~~~g~IS-GAHlNPAVTlal~l~G~~--~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~  176 (340)
T 3iyz_A          100 TMVQCFGHIS-GGHINPAVTVAMVCTRKI--SIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHG  176 (340)
T ss_pred             HheeEeeccC-cCeeChHHHHHHHHcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHH
Confidence            4688999999 999999999999999999  9999999999999999999999999987642      234456788999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCC-CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhh
Q 029946           76 ALTEGLLTFAIVTISLGLARKIPG-SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLA  154 (185)
Q Consensus        76 ~~~E~~~Tf~lv~~i~~~~~~~~~-~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~  154 (185)
                      ++.|+++||+|+++++++.+++.. .....|+.+|+++.++...++++||+++||||||||+++.+   .|.++|+||+|
T Consensus       177 f~~E~i~Tf~Lv~~Ila~~d~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~---~w~~~WVywvg  253 (340)
T 3iyz_A          177 LLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVG  253 (340)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCccCCcccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc---CCCcEeehhHH
Confidence            999999999999999998874322 23467899999998888888899999999999999999876   79999999999


Q ss_pred             hHHHHHHHHHHHHHhcCCchh
Q 029946          155 PIQATVIALWLFKLVVRPLAE  175 (185)
Q Consensus       155 p~~Ga~~a~~~~~~~~~~~~~  175 (185)
                      |++|+++|+++|++++.+..+
T Consensus       254 PiiGailaallY~~l~~p~~~  274 (340)
T 3iyz_A          254 PIIGAVLAGALYEYVFCPDVE  274 (340)
T ss_pred             HHHHHHHHHHHHHHHhCCChh
Confidence            999999999999999977654

>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*

Probab=100.00  E-value=5e-45  Score=299.07  Aligned_cols=168  Identities=19%  Similarity=0.197  Sum_probs=149.9

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC---CCCCCCcchHHHHHHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG---RGPSLNVGIHHGALTE   79 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~---~~~~~~~s~~~~~~~E   79 (185)
                      .++++|++| |||+|||||+++++.|++  +|++++.|+++|++||++|+.+++.++++..   ..|..+.+..++++.|
T Consensus        99 ~v~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~t~~~~~~s~~~~~~~E  175 (279)
T 2w2e_A           99 GVFITYRVS-GGNLNPAVTLALVLARAI--PPFRGILMAFTQIVAGMAAAGAASAMTPGEIAFANALGGGASRTRGLFLE  175 (279)
T ss_dssp             HHHHHTTTT-CCCCSHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCSCCCCTTCCHHHHHHHH
T ss_pred             HHHHHhhcC-ccccChHHHHHHHHcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHccccceeeccCCccccHHHHHHHH
Confidence            456789999 999999999999999999  9999999999999999999999999998752   2455567889999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhhHHHH
Q 029946           80 GLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQAT  159 (185)
Q Consensus        80 ~~~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p~~Ga  159 (185)
                      +++||+|+++++.+.+++.+...+.|+.+|+++.++.++.++.||+++||||||||+++.+.  .+.++|+||++|++|+
T Consensus       176 ~i~Tf~Lv~~Il~~~~~~~~~~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~--~~~~~WVy~vgPiiGa  253 (279)
T 2w2e_A          176 AFGTAILCLTVLMLAVEKHRATWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARS--FPNYHWIYWLGPILGA  253 (279)
T ss_dssp             HHHHHHHHHHHHHHTTSCSTTGGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTC--CCTTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHccCCCCCcCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhcc--chhhhhHHHHHHHHHH
Confidence            99999999999998875444556889999999999999999999999999999999999862  4568999999999999


Q ss_pred             HHHHHHHHHhcCCchh
Q 029946          160 VIALWLFKLVVRPLAE  175 (185)
Q Consensus       160 ~~a~~~~~~~~~~~~~  175 (185)
                      ++++++|+++...+.+
T Consensus       254 ~la~~ly~~l~~~~~~  269 (279)
T 2w2e_A          254 FLAYSIWQMWKWLNYQ  269 (279)
T ss_dssp             HHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHHHccCCC
Confidence            9999999999765544

>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.9e-45  Score=290.91  Aligned_cols=164  Identities=26%  Similarity=0.326  Sum_probs=145.6

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----C--CCCCCCcchHHHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI----G--RGPSLNVGIHHGA   76 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----~--~~~~~~~s~~~~~   76 (185)
                      .++++|++| |||+|||||+++++.|++  +|++++.|+++|++||++|+.+++.+++++    .  ..+.++.+..+++
T Consensus        53 ~v~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~  129 (223)
T 3gd8_A           53 MVQCFGHIS-GGHINPAVTVAMVCTRKI--SIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGL  129 (223)
T ss_dssp             HHHHHHHHH-CCCCSHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHH
T ss_pred             HHheecccc-cceEcHHHHHHHHHcCCC--CHHHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHH
Confidence            356789999 999999999999999999  999999999999999999999999998753    1  2345577889999


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCC-CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhh
Q 029946           77 LTEGLLTFAIVTISLGLARKIPG-SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAP  155 (185)
Q Consensus        77 ~~E~~~Tf~lv~~i~~~~~~~~~-~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p  155 (185)
                      +.|+++||+|+++++...|++.+ .....|+.+|+++......+++.||+++||||||+||++.+   .|+++|+||++|
T Consensus       130 ~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~---~w~~~Wvy~vgP  206 (223)
T 3gd8_A          130 LVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGP  206 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTCSCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---CCTTTTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccccCCccCCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc---CCCcEEeehhHH
Confidence            99999999999999998875432 23467999999998888887789999999999999999986   799999999999


Q ss_pred             HHHHHHHHHHHHHhcCC
Q 029946          156 IQATVIALWLFKLVVRP  172 (185)
Q Consensus       156 ~~Ga~~a~~~~~~~~~~  172 (185)
                      ++|+++++++|++++.|
T Consensus       207 ~~Ga~la~~~y~~~~~p  223 (223)
T 3gd8_A          207 IIGAVLAGGLYEYVFCP  223 (223)
T ss_dssp             HHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHcCC
Confidence            99999999999998865

>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A

Probab=100.00  E-value=6.1e-45  Score=300.73  Aligned_cols=167  Identities=26%  Similarity=0.331  Sum_probs=145.6

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------CCCCCCcchHHHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG------RGPSLNVGIHHGA   76 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~------~~~~~~~s~~~~~   76 (185)
                      .++++|++| |||+|||||+++++.|++  +|++++.|+++|++||++|+.+++.++++..      +.+....+..+++
T Consensus        62 ~v~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f  138 (301)
T 2zz9_A           62 MVQCFGHIS-GGHINPAVTVAMVCTRKI--SIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGL  138 (301)
T ss_dssp             HHHHHGGGT-CCCCSHHHHHHHHHTSSS--CTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHH
T ss_pred             hhheeccCC-cceeChHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHH
Confidence            356789999 999999999999999999  9999999999999999999999999997641      2344567889999


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCC-CCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhh
Q 029946           77 LTEGLLTFAIVTISLGLARKIP-GSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAP  155 (185)
Q Consensus        77 ~~E~~~Tf~lv~~i~~~~~~~~-~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p  155 (185)
                      +.|+++||+|+++++++.+++. ......|+.+|+++......++++||+++||||||||+++.+   .|.++|+||+||
T Consensus       139 ~~E~i~Tf~Lv~~Il~~~d~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~---~w~~~WVy~vgP  215 (301)
T 2zz9_A          139 LVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGP  215 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHSCSSSSCCSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC---CCTTTTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC---CCcceeeeeeHH
Confidence            9999999999999999876432 223478999999998888888899999999999999999986   799999999999


Q ss_pred             HHHHHHHHHHHHHhcCCchh
Q 029946          156 IQATVIALWLFKLVVRPLAE  175 (185)
Q Consensus       156 ~~Ga~~a~~~~~~~~~~~~~  175 (185)
                      ++|+++|+++|++++.+..+
T Consensus       216 iiGailaa~ly~~l~~~~~~  235 (301)
T 2zz9_A          216 IIGAVLAGALYEYVFCPDVE  235 (301)
T ss_dssp             HHHHHHHHHHHHTTTC----
T ss_pred             HHHHHHHHHHHHHHhCCchh
Confidence            99999999999999876543

>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*

Probab=100.00  E-value=8.5e-44  Score=289.95  Aligned_cols=166  Identities=20%  Similarity=0.302  Sum_probs=148.7

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------CCCCCCcchHHHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG------RGPSLNVGIHHGA   76 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~------~~~~~~~s~~~~~   76 (185)
                      .++++|++| |||+|||||++.++.|++  +|++.+.|+++|++||++|+.+++.++++..      ..+.++.+..+++
T Consensus        55 ~i~~~g~iS-GahlNPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~  131 (263)
T 2b6o_A           55 LVQAVGHIS-GAHVNPAVTFAFLVGSQM--SLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQAT  131 (263)
T ss_dssp             HHHHGGGTT-CCCCSHHHHHHHHHTTCS--CHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHH
T ss_pred             HHHHhhccC-cCeeChHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHH
Confidence            356789999 999999999999999999  9999999999999999999999999997641      2344567889999


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCC-CCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhh
Q 029946           77 LTEGLLTFAIVTISLGLARKIP-GSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAP  155 (185)
Q Consensus        77 ~~E~~~Tf~lv~~i~~~~~~~~-~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p  155 (185)
                      +.|+++||+|+++++.+.+++. ......|+.+|+++.++.+.++++||+++||||||||+++.+   .|+++|+||+||
T Consensus       132 ~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~Wvy~vgP  208 (263)
T 2b6o_A          132 IVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTNHWVYWVGP  208 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHSCTTSCSSCCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT---CCTTCTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCCCcccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC---CccceeHHHHHH
Confidence            9999999999999999977432 234578999999999999999999999999999999999976   899999999999


Q ss_pred             HHHHHHHHHHHHHhcCCch
Q 029946          156 IQATVIALWLFKLVVRPLA  174 (185)
Q Consensus       156 ~~Ga~~a~~~~~~~~~~~~  174 (185)
                      ++|+++++++|++++.++.
T Consensus       209 ~~Ga~la~~~y~~l~~~~~  227 (263)
T 2b6o_A          209 VIGAGLGSLLYDFLLFPRL  227 (263)
T ss_dssp             HHHHHHHHHHHHTTTSCCS
T ss_pred             HHHHHHHHHHHHHHhCCcc
Confidence            9999999999999987654

>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.7e-44  Score=294.32  Aligned_cols=167  Identities=25%  Similarity=0.299  Sum_probs=148.3

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----C--CCCCCCcchHHHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI----G--RGPSLNVGIHHGA   76 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----~--~~~~~~~s~~~~~   76 (185)
                      .++++|++| |||+|||||+++++.|++  +|++++.|+++|++||++|+.+++.++++.    .  ..+.++.+..+++
T Consensus        57 ~i~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~  133 (266)
T 3d9s_A           57 LAQALGPVS-GGHINPAITLALLVGNQI--SLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAM  133 (266)
T ss_dssp             HHHHHHHHH-CCCCCHHHHHHHHHTSSS--CHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHH
T ss_pred             HHHHHcccC-cceECHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHH
Confidence            456789999 999999999999999999  999999999999999999999999999752    1  2344567889999


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCC-CCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCccc-chhHhhh
Q 029946           77 LTEGLLTFAIVTISLGLARKIP-GSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEH-ILVYWLA  154 (185)
Q Consensus        77 ~~E~~~Tf~lv~~i~~~~~~~~-~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~-~~vy~v~  154 (185)
                      +.|+++||+|+++++.+.|++. ......|+.+|+++.++.+.++++||+++||||||||+++.+   .|++ +|+||++
T Consensus       134 ~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~~Wvy~vg  210 (266)
T 3d9s_A          134 VVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN---RFSPAHWVFWVG  210 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCCSCCCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT---CCCTTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCCccchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC---CcccCEeeeehH
Confidence            9999999999999999987432 234578999999999999999999999999999999999986   7888 9999999


Q ss_pred             hHHHHHHHHHHHHHhcCCchh
Q 029946          155 PIQATVIALWLFKLVVRPLAE  175 (185)
Q Consensus       155 p~~Ga~~a~~~~~~~~~~~~~  175 (185)
                      |++|+++++++|++++.++.+
T Consensus       211 P~~Ga~la~~~y~~l~~~~~~  231 (266)
T 3d9s_A          211 PIVGAVLAAILYFYLLFPNSL  231 (266)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSC
T ss_pred             HHHHHHHHHHHHHHHhCCCch
Confidence            999999999999999876543

>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A

Probab=100.00  E-value=3e-44  Score=293.79  Aligned_cols=166  Identities=19%  Similarity=0.250  Sum_probs=145.6

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----C--CCCCCCcchHHHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI----G--RGPSLNVGIHHGA   76 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----~--~~~~~~~s~~~~~   76 (185)
                      .++++|+|| |||+|||||+++++.|++  +|++++.|+++|++||++|+.+++.++++.    .  ..+.++.+..+++
T Consensus        65 ~i~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~  141 (271)
T 1j4n_A           65 LAQSVGHIS-GAHLNPAVTLGLLLSCQI--SVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGL  141 (271)
T ss_dssp             HHHHHHHHH-CCCCCHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGG
T ss_pred             HHHHHhcCC-cceEcHHHHHHHHHcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHH
Confidence            356789999 999999999999999999  999999999999999999999999998642    1  1233466778899


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCC-CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhh
Q 029946           77 LTEGLLTFAIVTISLGLARKIPG-SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAP  155 (185)
Q Consensus        77 ~~E~~~Tf~lv~~i~~~~~~~~~-~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p  155 (185)
                      +.|+++||+|++++++..+++.+ .....|+.+|+++......+++.||+++||||||||+++.+   .|+++|+||+||
T Consensus       142 ~~E~i~T~~Lv~~i~~~~d~~~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~---~~~~~wv~~vgP  218 (271)
T 1j4n_A          142 GIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH---NFQDHWIFWVGP  218 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT---CCTTTTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccccCCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC---CCcceeHHHHHH
Confidence            99999999999999998774322 24578999999999888887889999999999999999876   799999999999


Q ss_pred             HHHHHHHHHHHHHhcCCch
Q 029946          156 IQATVIALWLFKLVVRPLA  174 (185)
Q Consensus       156 ~~Ga~~a~~~~~~~~~~~~  174 (185)
                      ++|+++++++|++++.++.
T Consensus       219 ~~Ga~la~~~y~~~~~~~~  237 (271)
T 1j4n_A          219 FIGAALAVLIYDFILAPRS  237 (271)
T ss_dssp             HHHHHHHHHHHHTTTSCCS
T ss_pred             HHHHHHHHHHHHHHhCCCC
Confidence            9999999999999987654

>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*

Probab=100.00  E-value=5.4e-44  Score=288.87  Aligned_cols=166  Identities=19%  Similarity=0.184  Sum_probs=147.5

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC------C--CCCCCCcchHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI------G--RGPSLNVGIHH   74 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~------~--~~~~~~~s~~~   74 (185)
                      .++++|++| |||+|||||+++++.|++  +|++++.|+++|++||++|+.+++.+++++      .  ..|..+.+..+
T Consensus        69 ~v~~~g~iS-GaH~NPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~  145 (246)
T 2f2b_A           69 SIYALGNIS-GCHINPAVTIGLWSVKKF--PGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQ  145 (246)
T ss_dssp             HHHHHTTTT-CCCCSHHHHHHHHHTTSS--CGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHH
T ss_pred             Hhheecccc-cceeCHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHH
Confidence            456789999 999999999999999999  999999999999999999999999999862      1  23445778899


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHH--Hh-CCCCCcccchhH
Q 029946           75 GALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAY--AR-GDHITKEHILVY  151 (185)
Q Consensus        75 ~~~~E~~~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~--~~-~~~~~~~~~~vy  151 (185)
                      +++.|+++||+|+++++.+.+++.+.....|+.+|+++.++.++.+++||+++||||||+|++  .. ++++.|.|.|+|
T Consensus       146 ~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy  225 (246)
T 2f2b_A          146 AMLAEVVGTFLLMITIMGIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIY  225 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSTTSCTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHH
T ss_pred             HHHHHHHHHHHHHheeeEEecCCCCCCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEe
Confidence            999999999999999999876443334578999999999999999999999999999999999  33 446789999999


Q ss_pred             hhhhHHHHHHHHHHHHHhcC
Q 029946          152 WLAPIQATVIALWLFKLVVR  171 (185)
Q Consensus       152 ~v~p~~Ga~~a~~~~~~~~~  171 (185)
                      |++|++|+++++++|+.+++
T Consensus       226 ~vap~~Ga~laa~~y~~l~~  245 (246)
T 2f2b_A          226 VIGPIVGAVLAALTYQYLTS  245 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHTC
T ss_pred             eeHHHHHHHHHHHHHHHHcC
Confidence            99999999999999999875

>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*

Probab=100.00  E-value=4.7e-44  Score=287.15  Aligned_cols=164  Identities=18%  Similarity=0.309  Sum_probs=145.3

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC--------------C--CC
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG--------------R--GP   66 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--------------~--~~   66 (185)
                      .++++|++| |||+|||||+++++.|++  +|++++.|+++|++||++|+.+++.++++..              +  .|
T Consensus        53 ~i~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p  129 (234)
T 2o9g_A           53 MAFAVGHIS-GGHFNPAVTIGLWAGGRF--PAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSP  129 (234)
T ss_dssp             HHHHHHHHH-CCCCSHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGST
T ss_pred             HHHHhhccC-cceeCHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCC
Confidence            356789999 999999999999999999  9999999999999999999999999986421              0  12


Q ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcc
Q 029946           67 SLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKE  146 (185)
Q Consensus        67 ~~~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~  146 (185)
                      . +.+..++++.|+++||+|+++++...|++. .....|+.+|+++.++.+..++.||+++|||||||||++.+ +..|+
T Consensus       130 ~-~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~-~~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g-~~~~~  206 (234)
T 2o9g_A          130 G-GYSMLSALVVELVLSAGFLLVIHGATDKFA-PAGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQG-GWALE  206 (234)
T ss_dssp             T-CCCHHHHHHHHHHHHHHHHHHHHHHTSTTS-CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-SHHHH
T ss_pred             C-ccchHHHHHHHHHHHHHHHHHHHHhcCCCC-ccchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhC-CCCCc
Confidence            2 567899999999999999999999887432 34578999999999999999999999999999999999986 34567


Q ss_pred             cchhHhhhhHHHHHHHHHHHHHhcCC
Q 029946          147 HILVYWLAPIQATVIALWLFKLVVRP  172 (185)
Q Consensus       147 ~~~vy~v~p~~Ga~~a~~~~~~~~~~  172 (185)
                      ++|+||++|++|+++++++|++++.+
T Consensus       207 ~~Wv~~vgP~~Ga~la~~~y~~~~~~  232 (234)
T 2o9g_A          207 QLWFFWVVPIVGGIIGGLIYRTLLEK  232 (234)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             eeeeeehHHhHHHHHHHHHHHHHcCC
Confidence            99999999999999999999999765

>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*

Probab=100.00  E-value=2.4e-44  Score=295.85  Aligned_cols=169  Identities=17%  Similarity=0.181  Sum_probs=145.5

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--------------------
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI--------------------   62 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~--------------------   62 (185)
                      .++++|++| |||+|||||+++++.|++  +|++++.|+++|++||++|+.+++.++++.                    
T Consensus        55 ~i~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~  131 (281)
T 1ldf_A           55 AIYLTAGVS-GAHLNPAVTIALWLFACF--DKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDL  131 (281)
T ss_dssp             HHHHHHHHH-CCCCSHHHHHHHHHHSCC--CTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHH
T ss_pred             HhheecccC-cCeeChHHHHHHHHcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccc
Confidence            456789999 999999999999999999  999999999999999999999999987531                    


Q ss_pred             ----CCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCC--CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHH
Q 029946           63 ----GRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPG--SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWA  136 (185)
Q Consensus        63 ----~~~~~~~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~--~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~  136 (185)
                          ...|.++.+..++++.|+++||+|+++++.+.+++.+  ...+.|+.+|+++.++.+..++.||+++|||||||||
T Consensus       132 ~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPa  211 (281)
T 1ldf_A          132 AGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPK  211 (281)
T ss_dssp             HTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred             cceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHH
Confidence                0124456789999999999999999999999875432  2357899999999999999999999999999999999


Q ss_pred             HHhC---C-CCCc------ccchhHhhhhHHHHHHHHHHHHHhcCCch
Q 029946          137 YARG---D-HITK------EHILVYWLAPIQATVIALWLFKLVVRPLA  174 (185)
Q Consensus       137 ~~~~---~-~~~~------~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~  174 (185)
                      +++.   + ...|      .|+|+||++|++|+++++++|++++.++.
T Consensus       212 l~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~~~  259 (281)
T 1ldf_A          212 VFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHL  259 (281)
T ss_dssp             HHHHHTTTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTGGGC
T ss_pred             HHHHhcccccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhCccC
Confidence            9861   2 1122      27999999999999999999999986654

>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A

Probab=100.00  E-value=2.3e-44  Score=297.86  Aligned_cols=169  Identities=18%  Similarity=0.234  Sum_probs=147.8

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-------CCCCCCCcchHHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI-------GRGPSLNVGIHHG   75 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-------~~~~~~~~s~~~~   75 (185)
                      .++++|+|| |||+|||||+++++.|++  +|++++.|+++|++||++|+.+++.++++.       ...+..+.+..++
T Consensus       111 ~v~~~g~iS-GaHlNPAVTla~~l~g~~--~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~  187 (304)
T 3cn5_A          111 LVYCTAGIS-GGHINPAVTFGLFLARKV--ELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTA  187 (304)
T ss_dssp             HHHHHTTTT-CCCCSHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHH
T ss_pred             eeeEeeccC-CCccCcHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHH
Confidence            456789999 999999999999999999  999999999999999999999999998642       1124456788999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCC-CCc----chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchh
Q 029946           76 ALTEGLLTFAIVTISLGLARKIP-GSF----YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILV  150 (185)
Q Consensus        76 ~~~E~~~Tf~lv~~i~~~~~~~~-~~~----~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~v  150 (185)
                      ++.|+++||+|+++++...+++. ...    .+.|+.+|+++.++.++.+++||+++||||||||+++..+...|+++|+
T Consensus       188 f~~E~i~TfiLv~~Il~~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~Wv  267 (304)
T 3cn5_A          188 LGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWI  267 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHTEEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTH
T ss_pred             HHHHHHHHHHHHHHHhheecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEE
Confidence            99999999999999998776321 111    2789999999999999999999999999999999998543458999999


Q ss_pred             HhhhhHHHHHHHHHHHHHhcCCch
Q 029946          151 YWLAPIQATVIALWLFKLVVRPLA  174 (185)
Q Consensus       151 y~v~p~~Ga~~a~~~~~~~~~~~~  174 (185)
                      ||++|++|+++++++|++++.+..
T Consensus       268 ywvgPiiGa~laa~~y~~l~~~~~  291 (304)
T 3cn5_A          268 FWVGPFIGAAVAAAYHQYVLRAAA  291 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCC
T ss_pred             EeehHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999987653

>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=2.6e-43  Score=285.31  Aligned_cols=162  Identities=21%  Similarity=0.295  Sum_probs=142.8

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------------C--CCCC
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG------------R--GPSL   68 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~------------~--~~~~   68 (185)
                      .++++|+|| |||+|||||+++++.|++  +|++++.|+++|++||++|+.+++.++++..            +  .| .
T Consensus        78 ~i~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p-~  153 (256)
T 3llq_A           78 MAYAVGGIS-GGHFNPAVSVGLTVAGRF--PASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSP-G  153 (256)
T ss_dssp             HHHHHHHHH-CCCCSHHHHHHHHHTTSS--CGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGST-T
T ss_pred             HHheeeccc-cceEchHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCC-c
Confidence            457789999 999999999999999999  9999999999999999999999999885310            0  12 2


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccc
Q 029946           69 NVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHI  148 (185)
Q Consensus        69 ~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~  148 (185)
                      ..+..++++.|+++||+|+++++.+.+++. ...+.|+.+|+++.++.+..++.||+++|||||||||++.+ +..|+++
T Consensus       154 ~~s~~~~f~~E~i~Tf~Lv~~il~~~d~~~-~~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g-~~~~~~~  231 (256)
T 3llq_A          154 GYSLVSALLIEIILTAFFLIVILGSTHGRV-PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVG-GWALQQL  231 (256)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHSTTS-CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-HHHHHHT
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHhcCCCC-CccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcC-CCcccce
Confidence            467899999999999999999999887543 34578999999999999999999999999999999999986 2357799


Q ss_pred             hhHhhhhHHHHHHHHHHHHHhc
Q 029946          149 LVYWLAPIQATVIALWLFKLVV  170 (185)
Q Consensus       149 ~vy~v~p~~Ga~~a~~~~~~~~  170 (185)
                      |+||+||++|+++++++|+++.
T Consensus       232 WVy~vgPi~Ga~la~~~y~~l~  253 (256)
T 3llq_A          232 WLFWLAPIVGGAAGAVIWKLFG  253 (256)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHT
T ss_pred             eeeeeHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999884

>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}

Probab=100.00  E-value=7.6e-44  Score=289.70  Aligned_cols=172  Identities=17%  Similarity=0.171  Sum_probs=145.1

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC---C------C--CCCCCcc
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI---G------R--GPSLNVG   71 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~---~------~--~~~~~~s   71 (185)
                      .++++|++| |||+|||||+++++.|++  +|++++.|+++|++||++|+.+++.++++.   .      .  +.....+
T Consensus        57 ~i~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p  133 (258)
T 3c02_A           57 GILVSAKLS-GAHLNLAVSIGLSSINKF--DLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSIS  133 (258)
T ss_dssp             HHHHHHHHH-CCCCSHHHHHHHHHTTSS--CGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSC
T ss_pred             HHheecccC-cCeeChHHHHHHHHhCCC--cHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCc
Confidence            356789999 999999999999999999  999999999999999999999999998642   0      0  1122345


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCC--CCcchh-HHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhC---CCCCc
Q 029946           72 IHHGALTEGLLTFAIVTISLGLARKIP--GSFYMK-TWISSVSKLALHILGSDMTGGCMNPASVMGWAYARG---DHITK  145 (185)
Q Consensus        72 ~~~~~~~E~~~Tf~lv~~i~~~~~~~~--~~~~~~-~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~---~~~~~  145 (185)
                      ..++++.|+++||+|+++++.+.+++.  ....+. |+.+|+++.++.+..++.||+++||||||||+++.+   +...|
T Consensus       134 ~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~  213 (258)
T 3c02_A          134 LTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTF  213 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCcccCCcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhcccccccc
Confidence            567999999999999999999987432  234577 999999999999999999999999999999999873   12234


Q ss_pred             ----ccchhHhhhhHHHHHHHHHHHHHhcCCchhhh
Q 029946          146 ----EHILVYWLAPIQATVIALWLFKLVVRPLAEEK  177 (185)
Q Consensus       146 ----~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~~~~  177 (185)
                          .|+|+||++|++|+++++++|++++.++.+++
T Consensus       214 ~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~~~~~  249 (258)
T 3c02_A          214 TKDNFYFWVPLVAPCVGSVVFCQFYDKVICPLVDLA  249 (258)
T ss_dssp             HHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHHHHHC
T ss_pred             ccCCceeehHHHHHHHHHHHHHHHHHHHhcccCCCc
Confidence                67999999999999999999999987665543

>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*

Probab=99.68  E-value=2.9e-16  Score=127.59  Aligned_cols=101  Identities=15%  Similarity=0.175  Sum_probs=86.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCCCC-Ccc--hhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCccc
Q 029946           71 GIHHGALTEGLLTFAIVTISLGLARKIPG-SFY--MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEH  147 (185)
Q Consensus        71 s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~-~~~--~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~  147 (185)
                      +..+.++.|+++|++|+++.+.+..+.+. ...  ...+.+|+++++.+++.+++||+|+|||++++..+..+  .+|.+
T Consensus         8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~--~~~~~   85 (263)
T 2b6o_A            8 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQ--MSLLR   85 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTC--SCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcC--CCHHH
Confidence            56788999999999999999988763211 111  24688999999999999999999999999999999643  58999


Q ss_pred             chhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946          148 ILVYWLAPIQATVIALWLFKLVVRPL  173 (185)
Q Consensus       148 ~~vy~v~p~~Ga~~a~~~~~~~~~~~  173 (185)
                      .|+||++|++|+++++.+.+.+++++
T Consensus        86 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~  111 (263)
T 2b6o_A           86 AICYVVAQLLGAVAGAAVLYSVTPPA  111 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcccc
Confidence            99999999999999999999998764

>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}

Probab=99.60  E-value=2.6e-15  Score=121.24  Aligned_cols=100  Identities=19%  Similarity=0.225  Sum_probs=83.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhc--CC-CC-C-cc-hhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCC
Q 029946           71 GIHHGALTEGLLTFAIVTISLGLAR--KI-PG-S-FY-MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHIT  144 (185)
Q Consensus        71 s~~~~~~~E~~~Tf~lv~~i~~~~~--~~-~~-~-~~-~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~  144 (185)
                      +..+.++.|+++|++|++..+++..  +. +. + .. ...+.+|+++++.+++.+++||+|+|||+|++..+..+  .+
T Consensus        28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~  105 (256)
T 3llq_A           28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGR--FP  105 (256)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--SC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcC--CC
Confidence            4678899999999999999888753  11 11 1 11 23588999999999999999999999999999998644  58


Q ss_pred             cccchhHhhhhHHHHHHHHHHHHHhcCC
Q 029946          145 KEHILVYWLAPIQATVIALWLFKLVVRP  172 (185)
Q Consensus       145 ~~~~~vy~v~p~~Ga~~a~~~~~~~~~~  172 (185)
                      |.+.+.|+++|++|+++|+.+.+.+++.
T Consensus       106 ~~~~~~YiiAQ~lGA~~ga~lv~~~~~~  133 (256)
T 3llq_A          106 ASSLVPYVIAQVAGAIVAAAALYVIATG  133 (256)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999999999999999999999888754

>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}

Probab=99.60  E-value=2.7e-15  Score=121.60  Aligned_cols=105  Identities=12%  Similarity=0.109  Sum_probs=86.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcC----CCCCcc-hhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCc
Q 029946           71 GIHHGALTEGLLTFAIVTISLGLARK----IPGSFY-MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITK  145 (185)
Q Consensus        71 s~~~~~~~E~~~Tf~lv~~i~~~~~~----~~~~~~-~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~  145 (185)
                      +..+.++.|+++|++|++..+++..+    +..... ...+.+|+++++.+++.+++||+|+|||+|++..+..+  .+|
T Consensus         8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~~   85 (258)
T 3c02_A            8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINK--FDL   85 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--SCG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCC--CcH
Confidence            56788999999999999997765431    111112 24578899999999999999999999999999988644  589


Q ss_pred             ccchhHhhhhHHHHHHHHHHHHHhcCCchhhh
Q 029946          146 EHILVYWLAPIQATVIALWLFKLVVRPLAEEK  177 (185)
Q Consensus       146 ~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~~~~  177 (185)
                      .+...|+++|++|+++|+.+.+.+++++.++.
T Consensus        86 ~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~  117 (258)
T 3c02_A           86 KKIPVYFFAQLLGAFVGTSTVYGLYHGFISNS  117 (258)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcchhhhhc
Confidence            99999999999999999999999987765533

>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}

Probab=99.59  E-value=2.8e-15  Score=121.89  Aligned_cols=101  Identities=20%  Similarity=0.184  Sum_probs=85.8

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcCCCCC--c-chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcc
Q 029946           70 VGIHHGALTEGLLTFAIVTISLGLARKIPGS--F-YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKE  146 (185)
Q Consensus        70 ~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~~--~-~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~  146 (185)
                      .+..+.++.|+++|++|++..+++..+.++.  . ....+.+|+++++.+++.+++||+|+|||++++..+..+  .+|.
T Consensus         9 ~~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~~~   86 (266)
T 3d9s_A            9 VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQ--ISLL   86 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSS--SCHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcC--CCHH
Confidence            3567889999999999999999887532221  1 134689999999999999999999999999999998643  5899


Q ss_pred             cchhHhhhhHHHHHHHHHHHHHhcCC
Q 029946          147 HILVYWLAPIQATVIALWLFKLVVRP  172 (185)
Q Consensus       147 ~~~vy~v~p~~Ga~~a~~~~~~~~~~  172 (185)
                      +.+.|+++|++|+++|+.+.+.++++
T Consensus        87 ~~~~Yi~AQ~lGA~~ga~l~~~~~~~  112 (266)
T 3d9s_A           87 RAFFYVAAQLVGAIAGAGILYGVAPL  112 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            99999999999999999999999864

>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*

Probab=99.58  E-value=4.2e-15  Score=121.84  Aligned_cols=104  Identities=13%  Similarity=0.094  Sum_probs=85.8

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhc----CCCC-CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCC
Q 029946           70 VGIHHGALTEGLLTFAIVTISLGLAR----KIPG-SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHIT  144 (185)
Q Consensus        70 ~s~~~~~~~E~~~Tf~lv~~i~~~~~----~~~~-~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~  144 (185)
                      .+..+.++.|+++|++|++..+++..    ++.. +.....+.+|+++++.+++.+++||+|+|||+|++..+..+  .+
T Consensus         5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~   82 (281)
T 1ldf_A            5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFAC--FD   82 (281)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSC--CC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCC--CC
Confidence            35678899999999999998876542    1211 22234688999999999999999999999999999998654  58


Q ss_pred             cccchhHhhhhHHHHHHHHHHHHHhcCCchh
Q 029946          145 KEHILVYWLAPIQATVIALWLFKLVVRPLAE  175 (185)
Q Consensus       145 ~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~~  175 (185)
                      |.+...|+++|++|+++|+.+.+.+++++.+
T Consensus        83 ~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~  113 (281)
T 1ldf_A           83 KRKVIPFIVSQVAGAFCAAALVYGLYYNLFF  113 (281)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            9999999999999999999999998877644

>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A

Probab=99.58  E-value=1.1e-14  Score=120.04  Aligned_cols=103  Identities=18%  Similarity=0.220  Sum_probs=86.1

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcCC---CC--Cc--chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCC
Q 029946           70 VGIHHGALTEGLLTFAIVTISLGLARKI---PG--SF--YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDH  142 (185)
Q Consensus        70 ~s~~~~~~~E~~~Tf~lv~~i~~~~~~~---~~--~~--~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~  142 (185)
                      .+.++.++.||++|++|+++.+++....   .+  +.  ....+.+|+++++.+++.+++||+|+|||+|++..+..+  
T Consensus        10 ~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~--   87 (301)
T 2zz9_A           10 QAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK--   87 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSS--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcC--
Confidence            4578899999999999999998876521   11  11  134688999999999999999999999999999988644  


Q ss_pred             CCcccchhHhhhhHHHHHHHHHHHHHhcCCch
Q 029946          143 ITKEHILVYWLAPIQATVIALWLFKLVVRPLA  174 (185)
Q Consensus       143 ~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~  174 (185)
                      .+|.+...|+++|++|+++|+.+.+.++++..
T Consensus        88 ~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~  119 (301)
T 2zz9_A           88 ISIAKSVFYITAQCLGAIIGAGILYLVTPPSV  119 (301)
T ss_dssp             SCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            58999999999999999999999999887643

>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A

Probab=99.58  E-value=6.2e-15  Score=121.79  Aligned_cols=104  Identities=21%  Similarity=0.269  Sum_probs=85.6

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcC----CC--CCc--chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCC
Q 029946           70 VGIHHGALTEGLLTFAIVTISLGLARK----IP--GSF--YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGD  141 (185)
Q Consensus        70 ~s~~~~~~~E~~~Tf~lv~~i~~~~~~----~~--~~~--~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~  141 (185)
                      .+..+.++.|+++|++|+++.+++...    +.  .+.  ....+.+|+.+++.+++.+++||+|+|||+|++..+..+ 
T Consensus        58 ~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~-  136 (304)
T 3cn5_A           58 WSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARK-  136 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTS-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCC-
Confidence            356788999999999999998876431    11  111  124588999999999999999999999999999988654 


Q ss_pred             CCCcccchhHhhhhHHHHHHHHHHHHHhcCCchh
Q 029946          142 HITKEHILVYWLAPIQATVIALWLFKLVVRPLAE  175 (185)
Q Consensus       142 ~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~~  175 (185)
                       .+|.+...|+++|++|+++|+.+.+.+++++.+
T Consensus       137 -~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~  169 (304)
T 3cn5_A          137 -VELLRALVYMIAQCLGAICGVGLVKAFMKGPYN  169 (304)
T ss_dssp             -SCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence             589999999999999999999999999876544

>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}

Probab=99.56  E-value=8.3e-15  Score=116.34  Aligned_cols=101  Identities=20%  Similarity=0.235  Sum_probs=84.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcC---CCC--Cc--chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCC
Q 029946           71 GIHHGALTEGLLTFAIVTISLGLARK---IPG--SF--YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHI  143 (185)
Q Consensus        71 s~~~~~~~E~~~Tf~lv~~i~~~~~~---~~~--~~--~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~  143 (185)
                      +.++.++.|+++|++|++..+++..+   +.+  +.  ....+.+|+++++.+++.+++||+|+|||+|++..+..+  .
T Consensus         2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~--~   79 (223)
T 3gd8_A            2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK--I   79 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--S
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCC--C
Confidence            35788999999999999999887652   111  11  134578999999999999999999999999999988643  5


Q ss_pred             CcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946          144 TKEHILVYWLAPIQATVIALWLFKLVVRPL  173 (185)
Q Consensus       144 ~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~  173 (185)
                      +|.+...|+++|++|+++++.+.+.+++++
T Consensus        80 ~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~  109 (223)
T 3gd8_A           80 SIAKSVFYIAAQCLGAIIGAGILYLVTPPS  109 (223)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            888999999999999999999998887654

>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A

Probab=99.56  E-value=1.3e-14  Score=118.34  Aligned_cols=101  Identities=18%  Similarity=0.190  Sum_probs=83.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcC--------CCCC----cchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHH
Q 029946           71 GIHHGALTEGLLTFAIVTISLGLARK--------IPGS----FYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYA  138 (185)
Q Consensus        71 s~~~~~~~E~~~Tf~lv~~i~~~~~~--------~~~~----~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~  138 (185)
                      +.++.++.|+++|++|++..+++...        +...    .....+.+|+.+++.+++.+++||+|+|||+|++..+.
T Consensus         9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~   88 (271)
T 1j4n_A            9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS   88 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence            46788999999999999998876531        1111    12346889999999999999999999999999999986


Q ss_pred             hCCCCCcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946          139 RGDHITKEHILVYWLAPIQATVIALWLFKLVVRPL  173 (185)
Q Consensus       139 ~~~~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~  173 (185)
                      .+  .+|.+...||++|++|+++|+.+.+.++.+.
T Consensus        89 g~--~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~  121 (271)
T 1j4n_A           89 CQ--ISVLRAIMYIIAQCVGAIVATAILSGITSSL  121 (271)
T ss_dssp             TS--SCHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             CC--CCHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            44  5889999999999999999999999888543

>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*

Probab=99.56  E-value=7.6e-15  Score=117.36  Aligned_cols=100  Identities=18%  Similarity=0.196  Sum_probs=83.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc-CC-CCC---cc-hhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCc
Q 029946           72 IHHGALTEGLLTFAIVTISLGLAR-KI-PGS---FY-MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITK  145 (185)
Q Consensus        72 ~~~~~~~E~~~Tf~lv~~i~~~~~-~~-~~~---~~-~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~  145 (185)
                      ..+.++.|+++|++|++..+++.. ++ .++   .. ...+.+|+++++.+++.+++||+|+|||+|++..+..+  .+|
T Consensus         4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~~   81 (234)
T 2o9g_A            4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGR--FPA   81 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--SCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCC--CCH
Confidence            578899999999999999887643 11 111   11 24588999999999999999999999999999988644  589


Q ss_pred             ccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946          146 EHILVYWLAPIQATVIALWLFKLVVRPL  173 (185)
Q Consensus       146 ~~~~vy~v~p~~Ga~~a~~~~~~~~~~~  173 (185)
                      .+...|+++|++|+++|+.+.+.++++.
T Consensus        82 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~  109 (234)
T 2o9g_A           82 KEVVGYVIAQVVGGIVAAALLYLIASGK  109 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            9999999999999999999999888754

>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*

Probab=99.55  E-value=1.6e-14  Score=116.26  Aligned_cols=101  Identities=15%  Similarity=0.125  Sum_probs=83.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcC-----C-C-------CC-----c----chhHHHHHHHHHHHHHHhcCCCCCCcC
Q 029946           71 GIHHGALTEGLLTFAIVTISLGLARK-----I-P-------GS-----F----YMKTWISSVSKLALHILGSDMTGGCMN  128 (185)
Q Consensus        71 s~~~~~~~E~~~Tf~lv~~i~~~~~~-----~-~-------~~-----~----~~~~~~igl~v~~~~~~~~~~tG~~lN  128 (185)
                      +..+.++.|+++|++|++..+.+...     + +       .+     .    ....+.+|+.+++.+++.+++||+|+|
T Consensus         3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N   82 (246)
T 2f2b_A            3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN   82 (246)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence            56788999999999999998765421     1 0       01     0    014688999999999999999999999


Q ss_pred             hHHHHHHHHHhCCCCCcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946          129 PASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPL  173 (185)
Q Consensus       129 PA~~l~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~  173 (185)
                      ||+|++..+..+  .+|.+...|+++|++|+++|+.+.+.+++++
T Consensus        83 PAVTla~~~~g~--~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~  125 (246)
T 2f2b_A           83 PAVTIGLWSVKK--FPGREVVPYIIAQLLGAAFGSFIFLQCAGIG  125 (246)
T ss_dssp             HHHHHHHHHTTS--SCGGGHHHHHHHHHHHHHHHHHHHHHHHCTH
T ss_pred             HHHHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence            999999988644  5899999999999999999999999998873

>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}

Probab=99.55  E-value=9.7e-15  Score=121.72  Aligned_cols=101  Identities=19%  Similarity=0.234  Sum_probs=83.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcC---CCC----CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCC
Q 029946           71 GIHHGALTEGLLTFAIVTISLGLARK---IPG----SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHI  143 (185)
Q Consensus        71 s~~~~~~~E~~~Tf~lv~~i~~~~~~---~~~----~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~  143 (185)
                      +.++.++.||++||+|+++.+++..+   +.+    +.....+.+|+++++.+++.+++||+|+|||+|++..+..+  .
T Consensus        50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~--~  127 (340)
T 3iyz_A           50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK--I  127 (340)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCC--C
Confidence            45788999999999999998887652   111    11234688999999999999999999999999999988643  5


Q ss_pred             CcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946          144 TKEHILVYWLAPIQATVIALWLFKLVVRPL  173 (185)
Q Consensus       144 ~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~  173 (185)
                      .|.....|+++|++|+++|+.+.+.++++.
T Consensus       128 ~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~  157 (340)
T 3iyz_A          128 SIAKSVFYITAQCLGAIIGAGILYLVTPPS  157 (340)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence            889999999999999999999988887654

>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*

Probab=99.54  E-value=2e-14  Score=117.61  Aligned_cols=101  Identities=18%  Similarity=0.109  Sum_probs=82.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhh---cCC-----CCCc----chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHH
Q 029946           71 GIHHGALTEGLLTFAIVTISLGLA---RKI-----PGSF----YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYA  138 (185)
Q Consensus        71 s~~~~~~~E~~~Tf~lv~~i~~~~---~~~-----~~~~----~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~  138 (185)
                      +..+.++.|+++|++|++..++..   ...     .+..    ....+.+|+++++.+++.+++||+|+|||+|++..+.
T Consensus        43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~  122 (279)
T 2w2e_A           43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA  122 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence            456778999999999999877652   111     1111    1245789999999999999999999999999999886


Q ss_pred             hCCCCCcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946          139 RGDHITKEHILVYWLAPIQATVIALWLFKLVVRPL  173 (185)
Q Consensus       139 ~~~~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~  173 (185)
                      .+  .+|.+...|+++|++|+++|+.+.+.++++.
T Consensus       123 g~--~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~  155 (279)
T 2w2e_A          123 RA--IPPFRGILMAFTQIVAGMAAAGAASAMTPGE  155 (279)
T ss_dssp             TS--SCHHHHHHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred             CC--CCHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence            44  5889999999999999999999999988654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	185
d1j4na_	249	f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId	5e-09
d1ymga1	234	f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [	2e-08
d1rc2a_	231	f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId	4e-07
d1fx8a_	254	f.19.1.1 (A:) Glycerol uptake facilitator protein	7e-05

>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 249

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 51.7 bits (123), Expect = 5e-09
 Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 9/184 (4%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDF--SNFLFTVGARIPAQVIGSITGVRFILDT 58
             L   +G ++ G   NP   L   +S        +  + A+    ++ +          
Sbjct: 63  ATLAQSVGHIS-GAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSL 121

Query: 59  FPQIGRGPSLNVGIHHGA--LTEGLLTFAIVTISLGLA-RKIPGSFYMKTWISSVSKLAL 115
                   +L  G++ G     E + T  +V   L    R+              S    
Sbjct: 122 PDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVALG 181

Query: 116 HILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAE 175
           H+L  D TG  +NPA   G +    +    +   ++W+ P     +A+ ++  ++ P + 
Sbjct: 182 HLLAIDYTGCGINPARSFGSSVITHNF---QDHWIFWVGPFIGAALAVLIYDFILAPRSS 238

Query: 176 EKKD 179
           +  D
Sbjct: 239 DLTD 242

>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Length = 234

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-0
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.1 bits (119), Expect = 2e-08
 Identities = 35/189 (18%), Positives = 59/189 (31%), Gaps = 12/189 (6%)

Query: 1   MFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP 60
           +           G   NP    A  +    S  L      + AQ++G++ G   +    P
Sbjct: 47  LATLVQAVGHISGAHVNPAVTFAFLVGSQMS--LLRAICYMVAQLLGAVAGAAVLYSVTP 104

Query: 61  QIGR------GPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLA 114
              R           V +    + E  LT   V        +          ++    L 
Sbjct: 105 PAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLT 164

Query: 115 L-HILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPL 173
           L H+ G   TG  MNPA     A    +     +  VYW+ P+    +   L+  ++ P 
Sbjct: 165 LGHLFGMYYTGAGMNPARSFAPAILTRNF---TNHWVYWVGPVIGAGLGSLLYDFLLFPR 221

Query: 174 AEEKKDSKS 182
            +   +  S
Sbjct: 222 LKSVSERLS 230

>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Length = 231

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin Z
species: Escherichia coli [TaxId: 562]

 Score = 46.3 bits (109), Expect = 4e-07
 Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 19/175 (10%)

Query: 13  GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP------------ 60
           GG +NP   +     G F      V   + AQV+G I     +                 
Sbjct: 59  GGHFNPAVTIGLWAGGRFP--AKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGF 116

Query: 61  ---QIGRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHI 117
                G        +    + E +L+   + +  G   K   + +    I  ++   +H+
Sbjct: 117 ASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIG-LALTLIHL 175

Query: 118 LGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 172
           +   +T   +NPA     A  +G     E +  +W+ PI   +I   +++ ++  
Sbjct: 176 ISIPVTNTSVNPARSTAVAIFQGG-WALEQLWFFWVVPIVGGIIGGLIYRTLLEK 229

>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Length = 254

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Glycerol uptake facilitator protein GlpF
species: Escherichia coli [TaxId: 562]

 Score = 39.8 bits (92), Expect = 7e-05
 Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 12/118 (10%)

Query: 65  GPSLNVGIHHGALTEGLLTFAIVTISLGLA--RKIPGSFYMKTWISSVSKLALHILGSDM 122
            P+ ++        E ++T  ++ + L L           +   +  +    +      +
Sbjct: 133 YPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPL 192

Query: 123 TGGCMNPASVMGWAYARGDHITK----------EHILVYWLAPIQATVIALWLFKLVV 170
           TG  MNPA   G                      + LV    PI   ++  + ++ ++
Sbjct: 193 TGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLI 250

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	185
d1ymga1	234	Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}	100.0
d1fx8a_	254	Glycerol uptake facilitator protein GlpF {Escheric	100.0
d1rc2a_	231	Aquaporin Z {Escherichia coli [TaxId: 562]}	100.0
d1j4na_	249	Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}	100.0
d1ymga1	234	Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}	99.67
d1rc2a_	231	Aquaporin Z {Escherichia coli [TaxId: 562]}	99.57
d1fx8a_	254	Glycerol uptake facilitator protein GlpF {Escheric	99.54
d1j4na_	249	Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}	99.52

>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-0
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.2e-43  Score=283.05  Aligned_cols=169  Identities=20%  Similarity=0.282  Sum_probs=151.1

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------CCCCCCcchHHHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG------RGPSLNVGIHHGA   76 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~------~~~~~~~s~~~~~   76 (185)
                      .++.+|++| |||+|||||+++++.|++  +|++++.|+++|++||++|+.+++.++++..      ..+.++.+..+++
T Consensus        50 ~i~~~g~iS-GaH~NPAVTla~~~~g~i--~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (234)
T d1ymga1          50 LVQAVGHIS-GAHVNPAVTFAFLVGSQM--SLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQAT  126 (234)
T ss_dssp             HHHHHTTTT-CCCCSHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCTTTTCCCCCTTSCHHHHH
T ss_pred             HHHHHhccc-cCccCchhhHHHHhccCC--ChhheeeeeehHHHHHHHHHHHHHHHcCccccccccccccCccchhhHHH
Confidence            467899999 999999999999999999  9999999999999999999999999997652      2344567889999


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCC-CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhh
Q 029946           77 LTEGLLTFAIVTISLGLARKIPG-SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAP  155 (185)
Q Consensus        77 ~~E~~~Tf~lv~~i~~~~~~~~~-~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p  155 (185)
                      +.|++.|++|+++++...+++.+ .....++.+|+.+.+.....++.||+++|||||++|+++.+   .|+++|+||++|
T Consensus       127 ~~E~~~t~~lv~~i~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~~tG~~~NPAR~~gp~v~~~---~~~~~wiy~vgP  203 (234)
T d1ymga1         127 IVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTNHWVYWVGP  203 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSCSCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---CCTTTTHHHHHH
T ss_pred             HHHHHHHHHHHHhheeeecCCccCcCcceeEeehHHHHHHHHHhcccccccccchhhhhHHHhcc---CccCeeeeehHH
Confidence            99999999999999999885432 33466899999999999999999999999999999999976   799999999999


Q ss_pred             HHHHHHHHHHHHHhcCCchhhh
Q 029946          156 IQATVIALWLFKLVVRPLAEEK  177 (185)
Q Consensus       156 ~~Ga~~a~~~~~~~~~~~~~~~  177 (185)
                      ++|+++++++|++++.++.++.
T Consensus       204 ~~Ga~laa~ly~~~~~~~~~~~  225 (234)
T d1ymga1         204 VIGAGLGSLLYDFLLFPRLKSV  225 (234)
T ss_dssp             HHHHHHHHHHHHTTTSCCCCCH
T ss_pred             HHHHHHHHHHHHHHHcCCCcch
Confidence            9999999999999998876643

>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Glycerol uptake facilitator protein GlpF
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.2e-43  Score=284.72  Aligned_cols=168  Identities=16%  Similarity=0.161  Sum_probs=148.4

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--------------------
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI--------------------   62 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~--------------------   62 (185)
                      .++++|++| |||+|||||+++++.|++  ++++++.|+++|++|+++|+++++.++++.                    
T Consensus        50 ~i~~~g~vS-GaH~NPAVTla~~i~g~~--~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (254)
T d1fx8a_          50 AIYLTAGVS-GAHLNPAVTIALWLFACF--DKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDL  126 (254)
T ss_dssp             HHHHHHHHH-CCCCSHHHHHHHHHHSCC--CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHH
T ss_pred             HHHHHhccc-cceEChhhHHHHHHcCCC--cHHHhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccCCccchhh
Confidence            456789999 999999999999999999  999999999999999999999999886431                    


Q ss_pred             ----CCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCC--CCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHH
Q 029946           63 ----GRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIP--GSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWA  136 (185)
Q Consensus        63 ----~~~~~~~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~--~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~  136 (185)
                          ...|.++.|..++++.|+++|++|+++++.+.+++.  ++....|+.+|+.+.......+++||+++||||||||+
T Consensus       127 ~~~~~t~p~~~~s~~~~~~~E~v~Tf~lv~~il~~~~~~~~~~~~~~~~l~iG~~v~~~~~~~g~~TG~s~NPAR~lgpa  206 (254)
T d1fx8a_         127 AGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPK  206 (254)
T ss_dssp             HTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred             cceeecCCCccccHHHHHHHHHHHHHHHHHHHHHHhcCccCCCcccccchHHHHHHHHHHhhcccccccccChHHHHHHH
Confidence                013556788999999999999999999999988532  24457899999999999999999999999999999999


Q ss_pred             HHh----------CCCCCcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946          137 YAR----------GDHITKEHILVYWLAPIQATVIALWLFKLVVRPL  173 (185)
Q Consensus       137 ~~~----------~~~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~  173 (185)
                      ++.          .++.+|+++|+||++|++|+++++++||+++.++
T Consensus       207 i~~~~~~~~~~~~~~~~~~~~~wvy~vgP~~Ga~ia~~~y~~l~~~~  253 (254)
T d1fx8a_         207 VFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRH  253 (254)
T ss_dssp             HHHHHTTTTTHHHHTTCSSCTTHHHHHTTHHHHHHHHHHHHHHTGGG
T ss_pred             HHHhhcccccccccCCCCCCeeehHhHHHHHHHHHHHHHHHHHHhhh
Confidence            985          1235899999999999999999999999998765

>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin Z
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-42  Score=274.79  Aligned_cols=166  Identities=17%  Similarity=0.281  Sum_probs=146.0

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC---------------CCCC
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG---------------RGPS   67 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~---------------~~~~   67 (185)
                      +|+++|++| |||+|||||+++++.|++  ++++++.|+++|++||++|+.+++.+++++.               +.+.
T Consensus        50 ~i~~~g~iS-GaH~NPAVTla~~~~g~~--~~~~~~~Yi~aQ~lGa~~g~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~  126 (231)
T d1rc2a_          50 MAFAVGHIS-GGHFNPAVTIGLWAGGRF--PAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSP  126 (231)
T ss_dssp             HHHHHTTTT-CCCCSHHHHHHHHHTTCS--CTTTHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCTTSSS
T ss_pred             HHHHHhccc-CccCCCchhHHHHhcCCC--cHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccCC
Confidence            467789999 999999999999999999  9999999999999999999999999987531               1122


Q ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCccc
Q 029946           68 LNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEH  147 (185)
Q Consensus        68 ~~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~  147 (185)
                      .+.+..++++.|+++|++++++++...++++ .....|+.+|+.+....+..+++||+++|||||++|+++.++ ..|++
T Consensus       127 ~~~~~~~~~~~E~i~t~~l~~~i~~~~~~~~-~~~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~gp~i~~~~-~~~~~  204 (231)
T d1rc2a_         127 GGYSMLSALVVELVLSAGFLLVIHGATDKFA-PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGG-WALEQ  204 (231)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHTSTTS-CTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCS-HHHHH
T ss_pred             cccchhhhhHHHHHHHHHHHHHHhhhhcccC-cccchhhHHHHHHHHhhhhccccCCcccchHhhhHHHHHcCC-Ccccc
Confidence            3568899999999999999999998877543 344678999999999999999999999999999999998862 34689


Q ss_pred             chhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946          148 ILVYWLAPIQATVIALWLFKLVVRPL  173 (185)
Q Consensus       148 ~~vy~v~p~~Ga~~a~~~~~~~~~~~  173 (185)
                      +|+||++|++|+++++++||+++.++
T Consensus       205 ~wvy~~~P~~Ga~~a~~ly~~~~~~~  230 (231)
T d1rc2a_         205 LWFFWVVPIVGGIIGGLIYRTLLEKR  230 (231)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHSSSCC
T ss_pred             eeEEehHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999998765

>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.3e-41  Score=273.60  Aligned_cols=168  Identities=19%  Similarity=0.258  Sum_probs=149.4

Q ss_pred             EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------CCCCCCcchHHHH
Q 029946            3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG------RGPSLNVGIHHGA   76 (185)
Q Consensus         3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~------~~~~~~~s~~~~~   76 (185)
                      +++++|++| |||+|||||+++++.|++  ++++++.|+++|++|+++|+.+++.++++..      ..+.++.+..+++
T Consensus        65 ~i~~~g~iS-GaH~NPAVTla~~~~g~i--~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (249)
T d1j4na_          65 LAQSVGHIS-GAHLNPAVTLGLLLSCQI--SVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGL  141 (249)
T ss_dssp             HHHHHHHHH-CCCCCHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGG
T ss_pred             HHHHhhccc-cceeCchhHHHHHhcccc--chhheeeeeeHHHHHHHHHHhhheeeccccccccccceeccCCCchHHHH
Confidence            356789999 999999999999999999  9999999999999999999999999987641      2344567788999


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCC-CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhh
Q 029946           77 LTEGLLTFAIVTISLGLARKIPG-SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAP  155 (185)
Q Consensus        77 ~~E~~~Tf~lv~~i~~~~~~~~~-~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p  155 (185)
                      +.|+++|++|+++++...+++.+ .....|+.+|+.+.......++.||+++||||+++|+++.+   .|+++|+||++|
T Consensus       142 ~~E~~~T~~l~~~i~~~~~~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAR~lgp~i~~~---~~~~~wvy~vgP  218 (249)
T d1j4na_         142 GIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH---NFQDHWIFWVGP  218 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT---CCTTTTHHHHHH
T ss_pred             HHHHHHHHHHHHhheeecccccCCCCCCchhHHHHHHHHHHHhcccccCcccChhhhhhHHHhcc---CccCeeeeehHH
Confidence            99999999999999999875432 34567899999999999999999999999999999999876   799999999999


Q ss_pred             HHHHHHHHHHHHHhcCCchhh
Q 029946          156 IQATVIALWLFKLVVRPLAEE  176 (185)
Q Consensus       156 ~~Ga~~a~~~~~~~~~~~~~~  176 (185)
                      ++|+++++++|++++.|++++
T Consensus       219 ~iGa~la~~~y~~~~~p~~~~  239 (249)
T d1j4na_         219 FIGAALAVLIYDFILAPRSSD  239 (249)
T ss_dssp             HHHHHHHHHHHHTTTSCCSSC
T ss_pred             HHHHHHHHHHHHHhcCCCCCC
Confidence            999999999999999887653

>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-0
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.67  E-value=3.5e-16  Score=123.23  Aligned_cols=105  Identities=13%  Similarity=0.154  Sum_probs=88.9

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcc
Q 029946           70 VGIHHGALTEGLLTFAIVTISLGLARKIPGSF---YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKE  146 (185)
Q Consensus        70 ~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~~~---~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~  146 (185)
                      .|.+|.++.|+++|+++++..+........+.   ...++.+|+.++..++..+++||+|+|||+|++..+..  ..+|.
T Consensus         2 ~s~~r~~laEf~GT~~lvf~g~gs~~~~~~~~~~~~~ial~~G~~v~~~i~~~g~iSGaH~NPAVTla~~~~g--~i~~~   79 (234)
T d1ymga1           2 ASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGS--QMSLL   79 (234)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHCSCC-CHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTT--SSCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHhccccCccCchhhHHHHhcc--CCChh
Confidence            47899999999999999999998765322221   23468899999999999999999999999999988854  46899


Q ss_pred             cchhHhhhhHHHHHHHHHHHHHhcCCchhh
Q 029946          147 HILVYWLAPIQATVIALWLFKLVVRPLAEE  176 (185)
Q Consensus       147 ~~~vy~v~p~~Ga~~a~~~~~~~~~~~~~~  176 (185)
                      +...|+++|++|+++|+.+.+.++.++.++
T Consensus        80 ~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~  109 (234)
T d1ymga1          80 RAICYMVAQLLGAVAGAAVLYSVTPPAVRG  109 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSCTTTCT
T ss_pred             heeeeeehHHHHHHHHHHHHHHHcCccccc
Confidence            999999999999999999999998877653

>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin Z
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=8.3e-15  Score=114.81  Aligned_cols=100  Identities=18%  Similarity=0.177  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhc--CCCCCc----chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcc
Q 029946           73 HHGALTEGLLTFAIVTISLGLAR--KIPGSF----YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKE  146 (185)
Q Consensus        73 ~~~~~~E~~~Tf~lv~~i~~~~~--~~~~~~----~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~  146 (185)
                      +|.++.|+++|++|++..+....  +...+.    ...++.+|+.++..+++.+++||+|+|||+|++..+..  ..+|.
T Consensus         2 ~r~~~aEfiGT~llvf~g~gs~~~~~~~~~~~~~~~~ia~~~Gl~v~~~i~~~g~iSGaH~NPAVTla~~~~g--~~~~~   79 (231)
T d1rc2a_           2 FRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGG--RFPAK   79 (231)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSSCTTTCCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTT--CSCTT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHHHHHHHHHHhcccCccCCCchhHHHHhcC--CCcHH
Confidence            57899999999999999886543  111111    23368899999999999999999999999999988854  46899


Q ss_pred             cchhHhhhhHHHHHHHHHHHHHhcCCch
Q 029946          147 HILVYWLAPIQATVIALWLFKLVVRPLA  174 (185)
Q Consensus       147 ~~~vy~v~p~~Ga~~a~~~~~~~~~~~~  174 (185)
                      +...|+++|++|+++|+.+.+.++.++.
T Consensus        80 ~~~~Yi~aQ~lGa~~g~~l~~~i~~~~~  107 (231)
T d1rc2a_          80 EVVGYVIAQVVGGIVAAALLYLIASGKT  107 (231)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            9999999999999999999998887654

>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Glycerol uptake facilitator protein GlpF
species: Escherichia coli [TaxId: 562]

Probab=99.54  E-value=8.3e-15  Score=116.49  Aligned_cols=102  Identities=14%  Similarity=0.083  Sum_probs=84.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc----CCC-CCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcc
Q 029946           72 IHHGALTEGLLTFAIVTISLGLAR----KIP-GSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKE  146 (185)
Q Consensus        72 ~~~~~~~E~~~Tf~lv~~i~~~~~----~~~-~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~  146 (185)
                      ..|-.+.|+++|++|++..+++..    .++ .+....++.+|+.++..+++.+++||+|+|||+|++..+..+  .+|.
T Consensus         2 l~~~~lAEflGT~~lvf~g~g~~~~~~~~~~~~~~~~ia~~~g~~v~~~i~~~g~vSGaH~NPAVTla~~i~g~--~~~~   79 (254)
T d1fx8a_           2 LKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFAC--FDKR   79 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSC--CCGG
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHHHHHHHHHHHHHHHHhccccceEChhhHHHHHHcCC--CcHH
Confidence            456789999999999998766542    122 222356789999999999999999999999999999988654  5899


Q ss_pred             cchhHhhhhHHHHHHHHHHHHHhcCCchh
Q 029946          147 HILVYWLAPIQATVIALWLFKLVVRPLAE  175 (185)
Q Consensus       147 ~~~vy~v~p~~Ga~~a~~~~~~~~~~~~~  175 (185)
                      +...|+++|++|+++|+++.+.++++...
T Consensus        80 ~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~  108 (254)
T d1fx8a_          80 KVIPFIVSQVAGAFCAAALVYGLYYNLFF  108 (254)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            99999999999999999999888877654

>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.52  E-value=2.5e-14  Score=113.39  Aligned_cols=103  Identities=17%  Similarity=0.204  Sum_probs=84.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcC--------CCC----CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHH
Q 029946           71 GIHHGALTEGLLTFAIVTISLGLARK--------IPG----SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYA  138 (185)
Q Consensus        71 s~~~~~~~E~~~Tf~lv~~i~~~~~~--------~~~----~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~  138 (185)
                      ..+|.++.|+++||++++..++....        ...    +.....+.+|+.++..+++.+++||+|+|||++++..+.
T Consensus         9 ~~wr~~~aEf~gTfllvf~~~gs~~~~~~~~~~~~~~~~~~~~l~ial~~G~~v~~~i~~~g~iSGaH~NPAVTla~~~~   88 (249)
T d1j4na_           9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS   88 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccHHHHHHHHHHHHHHHHHHhhccccceeCchhHHHHHhc
Confidence            45899999999999999998876421        111    112345788999999999999999999999999998885


Q ss_pred             hCCCCCcccchhHhhhhHHHHHHHHHHHHHhcCCchh
Q 029946          139 RGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAE  175 (185)
Q Consensus       139 ~~~~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~~  175 (185)
                      .  ..+|.+...|+++|++|+++|+.+.+.++.+..+
T Consensus        89 g--~i~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~  123 (249)
T d1j4na_          89 C--QISVLRAIMYIIAQCVGAIVATAILSGITSSLPD  123 (249)
T ss_dssp             T--SSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTT
T ss_pred             c--ccchhheeeeeeHHHHHHHHHHhhheeecccccc
Confidence            4  3588899999999999999999999999876544