Citrus Sinensis ID: 030053

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180---
Protein Sequence
MAVETAAAKYSSSSWPWSNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLSRATE
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MAVETAAAkysssswpwsnkrFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAAsaigyvgkygelkmgwgpvcgfapkfcnrSTISLVLSYLAFLCYMGLTILSAHKLLSRATE
Flexible Loop (DISEMBL)
MAVETAAakysssswpwsnKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLSRATE
Low Complexity Region (SEG)
MAVETAAAKYSSSSWPWSNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLSRATE
Disordered region (IsUnstruct)
*************SWPWSNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKL******
Disordered Region (DISOPRED)
***********************VAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLS****
Disordered Region (DISEMBL)
**************WPWSNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLSRATE
Disordered Region (DISPRO)
****************WSNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLS****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAVETAAAKYSSSSWPWSNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLSRATE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	183	2.2.26 [Sep-21-2011]
B9RH17	201	CASP-like protein RCOM_14	N/A	no	0.890	0.810	0.554	4e-43
B9GFG6	193	CASP-like protein POPTRDR	yes	no	0.907	0.860	0.485	2e-38
B9RA90	179	CASP-like protein RCOM_15	N/A	no	0.934	0.955	0.431	7e-34
A7PA04	189	CASP-like protein VIT_14s	yes	no	0.896	0.867	0.449	2e-33
A7PHN8	206	CASP-like protein VIT_17s	no	no	0.923	0.820	0.447	4e-31
B9I3X5	181	CASP-like protein POPTRDR	no	no	0.907	0.917	0.422	9e-28
B9IFI5	181	CASP-like protein POPTRDR	no	no	0.950	0.961	0.389	8e-24
Q9M0L3	170	CASP-like protein At4g250	yes	no	0.803	0.864	0.369	1e-18
D7MGK0	170	CASP-like protein ARALYDR	N/A	no	0.803	0.864	0.369	4e-18
B9N3F4	163	CASP-like protein POPTRDR	no	no	0.836	0.938	0.345	8e-15

>sp|B9RH17|CSPLA_RICCO CASP-like protein RCOM_1446020 OS=Ricinus communis GN=RCOM_1446020 PE=2 SV=1

 Score =  174 bits (440), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 92/166 (55%), Positives = 122/166 (73%), Gaps = 3/166 (1%)

Query: 15  WPWSNKR-FFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFG 73
           +P   KR FF+AQ+  RILA AF++A++S M+T  Q V+VF +     YS SSA+RFL G
Sbjct: 23  YPSQPKRIFFMAQVIFRILAIAFAVASISAMVTSDQNVIVFGMDTAARYSYSSAFRFLVG 82

Query: 74  ANIVTCILSVLSLIFVCLISLSASHM--KYFLLFLHDMVTMVLLISGCAAASAIGYVGKY 131
           AN V C  SVLSLIFVCL+S  +  +  K + LFLHDMV MV+++SGC+AA+AIGYVG+Y
Sbjct: 83  ANAVVCGFSVLSLIFVCLMSRRSEAILEKNYYLFLHDMVMMVMMVSGCSAATAIGYVGRY 142

Query: 132 GELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKL 177
           GE ++ W  VC F  KFCN++ +S+VL+YLA  CY+ LT L+AHKL
Sbjct: 143 GEKEITWTAVCDFVGKFCNQALVSIVLAYLALFCYVALTTLAAHKL 188

Ricinus communis (taxid: 3988)

>sp|B9GFG6|CSPLF_POPTR CASP-like protein POPTRDRAFT_752786 OS=Populus trichocarpa GN=POPTRDRAFT_752786 PE=3 SV=1

 Score =  158 bits (399), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/167 (48%), Positives = 110/167 (65%), Gaps = 1/167 (0%)

Query: 18  SNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIV 77
           S +   +AQITLR LA AF++ A+ +MIT  + V +  + +  +Y  SSA +FL G N  
Sbjct: 27  SQRSRILAQITLRFLAIAFTVTAIPVMITAKEPVSLLGLAITPSYKQSSAMKFLLGVNAT 86

Query: 78  TCILSVLSLIFVCLISLSASH-MKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKM 136
               + LS++FV  +  S S  + YF L LHDMV  +LLISGCAAA+A+GY+ +YG+ + 
Sbjct: 87  VFAFTALSMLFVWPLRRSGSKPINYFFLHLHDMVMTLLLISGCAAATAVGYLSQYGQPET 146

Query: 137 GWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLSRATE 183
            W P+C    KFC++  IS VLSYLAF CY+ L ILS HKL+SRATE
Sbjct: 147 YWSPICDIVKKFCHQMLISTVLSYLAFFCYLALNILSVHKLMSRATE 193

Populus trichocarpa (taxid: 3694)

>sp|B9RA90|CSPL8_RICCO CASP-like protein RCOM_1504680 OS=Ricinus communis GN=RCOM_1504680 PE=2 SV=1

 Score =  143 bits (360), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 118/176 (67%), Gaps = 5/176 (2%)

Query: 3   VETAAAKYSSSSWPWSNKRFFV-AQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVT 61
           +E    KY+S   P  +++ F+ AQI LRI+    +LAA  +M+T  Q++      M   
Sbjct: 1   MENVEDKYNS---PLKSQKLFIGAQICLRIVTIGATLAATWIMVTDKQSITFGDFVMVAK 57

Query: 62  YSSSSAWRFLFGANIVTCILSVLSLIFVCLISLSASHMKY-FLLFLHDMVTMVLLISGCA 120
           Y+ SSA++F   AN++ C  SV+SL+F+C +   +S+  + FLLFLHD++ M L+++GC+
Sbjct: 58  YNYSSAFKFFVLANVIACACSVVSLLFLCALGRYSSNPGHVFLLFLHDLLMMSLVLAGCS 117

Query: 121 AASAIGYVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHK 176
           AA+AIG++GKYG  K GW P+C    +FCNR TIS++LSYL+ +C + LT+ SA+K
Sbjct: 118 AATAIGFLGKYGNTKSGWMPICDQFGQFCNRGTISMMLSYLSMVCLLILTVTSANK 173

Ricinus communis (taxid: 3988)

>sp|A7PA04|CSPL6_VITVI CASP-like protein VIT_14s0068g01400 OS=Vitis vinifera GN=VIT_14s0068g01400 PE=2 SV=1

 Score =  142 bits (357), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 109/167 (65%), Gaps = 3/167 (1%)

Query: 11  SSSSWPWSNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRF 70
            +SS P     FF+AQ+ LR    AF+ AA+++M+T  +TV VF +   V YS  SA++F
Sbjct: 19  EASSPPQMG--FFIAQVVLRFFTLAFTGAAIAVMVTAKETVEVFSISFTVRYSYLSAFKF 76

Query: 71  LFGANIVTCILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGK 130
           L GA+ V C  S+LSLIFV + +   S+  YF L+ HD++ MVL +S CAAA+A+GYVG+
Sbjct: 77  LVGADAVVCGFSMLSLIFVSIFNKGKSN-HYFFLYFHDLILMVLSMSACAAATAVGYVGR 135

Query: 131 YGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKL 177
           YG+ K  W  VCG    FC+++  S++LS + F+C   LTI++A  L
Sbjct: 136 YGQDKAAWMAVCGNVKMFCDKALASILLSLIGFICLFLLTIMAARNL 182

Vitis vinifera (taxid: 29760)

>sp|A7PHN8|CSPL4_VITVI CASP-like protein VIT_17s0000g00560 OS=Vitis vinifera GN=VIT_17s0000g00560 PE=2 SV=2

 Score =  134 bits (336), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 108/170 (63%), Gaps = 1/170 (0%)

Query: 8   AKYSSSSWPWSNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSA 67
           AK+  +    ++K F  A I LRIL    +L A  +MIT  QTV V+ +Q++  YS SSA
Sbjct: 31  AKFQQNPPLGTHKLFLGAHICLRILTVTATLTAAWMMITSKQTVEVYGIQVEAKYSYSSA 90

Query: 68  WRFLFGANIVTCILSVLSLIFV-CLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIG 126
           ++F   AN + C  SVL+L     L    ++ MK+F LFLHD+  M L+++GCAAA+AIG
Sbjct: 91  FKFFSYANAIACGCSVLTLFPAFSLFYRGSTPMKFFFLFLHDLCMMSLVLAGCAAATAIG 150

Query: 127 YVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHK 176
           YVG+YG    GW  +C    ++CNR  +SL+ SYLAF+  + LTI+SA+K
Sbjct: 151 YVGRYGNNHAGWMAICDQFDEYCNRIRLSLMFSYLAFVFILMLTIMSANK 200

Vitis vinifera (taxid: 29760)

>sp|B9I3X5|CSPL3_POPTR CASP-like protein POPTRDRAFT_823430 OS=Populus trichocarpa GN=POPTRDRAFT_823430 PE=3 SV=1

 Score =  122 bits (307), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 100/168 (59%), Gaps = 2/168 (1%)

Query: 11  SSSSWPWSNKRFFV-AQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWR 69
           SS + P   +  F+ AQI LRI+  A S A+  LM+T  QT+ +    +   YS S  ++
Sbjct: 8   SSQNQPLKTQNIFIGAQIFLRIVVIAASFASTWLMLTNKQTIDIGGFVLDANYSYSPEFK 67

Query: 70  FLFGANIVTCILSVLSLIFVCLISLSASHMKY-FLLFLHDMVTMVLLISGCAAASAIGYV 128
           FL  ANIV    S +SL+F+ L+   +S+  Y F+LFLHD+  M L++ GCAAA+ IG +
Sbjct: 68  FLSYANIVVGAFSFVSLLFLVLVGRRSSNPTYYFILFLHDLALMSLVLGGCAAATVIGSL 127

Query: 129 GKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHK 176
           GKYG    GW  +C    KFC R+T S+  SY + +C + LTI SA K
Sbjct: 128 GKYGNSHTGWMQICDHFGKFCKRATTSVAFSYFSLVCLLILTITSASK 175

Populus trichocarpa (taxid: 3694)

>sp|B9IFI5|CSPLH_POPTR CASP-like protein POPTRDRAFT_824792 OS=Populus trichocarpa GN=POPTRDRAFT_824792 PE=2 SV=1

 Score =  109 bits (273), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 69/177 (38%), Positives = 99/177 (55%), Gaps = 3/177 (1%)

Query: 8   AKYSSSSWPWSNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSA 67
           AK+S +    + K F   QI  RI+A A S+A+  LMIT  Q + +  + +   YS S  
Sbjct: 6   AKFSVNQPLKTQKLFIGVQIFFRIVAIAASVASSWLMITSKQVIDIGGIVLDARYSYSPE 65

Query: 68  WRFLFGANIVT-CILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIG 126
           ++FL   NIV  C   +  L  V ++   ++   YF LFLHD+  M L++ GCAAA+ +G
Sbjct: 66  FKFLAFTNIVVGCFSLLSLLFLVLVVRQGSNPNHYFFLFLHDLAMMSLVVGGCAAATTVG 125

Query: 127 YVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLSRATE 183
           ++GK+G    GW  +C    KFCNR+  S+ +SYL  +C   LTI SA K  SR  E
Sbjct: 126 FLGKHGNSHTGWMQICDNFGKFCNRAQTSVTISYLNLICLSILTITSASK--SRKME 180

Populus trichocarpa (taxid: 3694)

>sp|Q9M0L3|CSPLR_ARATH CASP-like protein At4g25040 OS=Arabidopsis thaliana GN=At4g25040 PE=2 SV=1

 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 91/149 (61%), Gaps = 2/149 (1%)

Query: 26  QITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLS 85
           Q+++R+L    ++A++ +MIT  +   V+ +  +  YS SSA+R+L  A I  C  ++ +
Sbjct: 18  QVSMRVLTIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAFRYLVYAQIAVCAATLFT 77

Query: 86  LIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFA 145
           L++ CL       +  F LF  D++T +  IS  +AA A GYVGKYG  + GW P+CG+ 
Sbjct: 78  LVWACLAVRRRGLV--FALFFFDLLTTLTAISAFSAAFAEGYVGKYGNKQAGWLPICGYV 135

Query: 146 PKFCNRSTISLVLSYLAFLCYMGLTILSA 174
             +C+R TISL +S+ +F+    LT+L+A
Sbjct: 136 HGYCSRVTISLAMSFASFILLFILTVLTA 164

Arabidopsis thaliana (taxid: 3702)

>sp|D7MGK0|CSPL5_ARALL CASP-like protein ARALYDRAFT_492333 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492333 PE=3 SV=1

 Score = 90.9 bits (224), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 91/149 (61%), Gaps = 2/149 (1%)

Query: 26  QITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLS 85
           Q+++R+L    ++A++ +MIT  +   V+ +  +  YS SSA+R+L  A I  C  ++ +
Sbjct: 18  QVSMRVLIIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAFRYLVYAQIAVCAATLFT 77

Query: 86  LIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFA 145
           L++ CL       +  F LF  D++T +  IS  +AA A GYVGKYG  + GW P+CG+ 
Sbjct: 78  LVWACLAVRRRGLV--FALFFFDLLTTLTAISAFSAAFAEGYVGKYGNKQAGWLPICGYV 135

Query: 146 PKFCNRSTISLVLSYLAFLCYMGLTILSA 174
             +C+R TISL +S+ +F+    LT+L+A
Sbjct: 136 HVYCSRVTISLAMSFASFVLLFILTVLTA 164

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

>sp|B9N3F4|CSPL9_POPTR CASP-like protein POPTRDRAFT_810994 OS=Populus trichocarpa GN=POPTRDRAFT_810994 PE=3 SV=1

 Score = 80.1 bits (196), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 9/162 (5%)

Query: 18  SNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIV 77
           SNK F     TLR+LA A ++ A+  M+T   +  V  +     YS++ A+++L     +
Sbjct: 4   SNKIF---TNTLRLLALAATVVAIVFMVTSHDSAQVLNLTFTAKYSNTPAFKYLVIGEAI 60

Query: 78  TCILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMG 137
               +V+S++      LS   + + L+ + DMVT VLL S  +AA AI  VGK G    G
Sbjct: 61  AGGYTVISIL------LSFKGLFWRLIVILDMVTTVLLTSSISAALAIAQVGKKGNTHAG 114

Query: 138 WGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLS 179
           W P+CG  P FC+  TI+L+  + A + Y  L + S + +LS
Sbjct: 115 WLPICGQVPDFCDYVTIALIAGFAAAIIYFVLLLCSLYVVLS 156

Populus trichocarpa (taxid: 3694)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
255543627	201	conserved hypothetical protein [Ricinus	0.890	0.810	0.554	2e-41
224055803	193	predicted protein [Populus trichocarpa]	0.907	0.860	0.485	1e-36
356561389	161	PREDICTED: CASP-like protein RCOM_144602	0.874	0.993	0.462	3e-35
388519157	203	unknown [Lotus japonicus]	0.923	0.832	0.456	4e-35
255540101	179	conserved hypothetical protein [Ricinus	0.934	0.955	0.431	3e-32
225451553	189	PREDICTED: UPF0497 membrane protein 7 [V	0.896	0.867	0.449	9e-32
147785052	189	hypothetical protein VITISV_043317 [Viti	0.896	0.867	0.449	1e-31
357508281	186	hypothetical protein MTR_7g083120 [Medic	0.934	0.919	0.431	5e-31
225456445	181	PREDICTED: UPF0497 membrane protein 8 [V	0.923	0.933	0.447	1e-29
341940410	206	RecName: Full=CASP-like protein VIT_17s0	0.923	0.820	0.447	2e-29

>gi|255543627|ref|XP_002512876.1| conserved hypothetical protein [Ricinus communis] gi|288559202|sp|B9RH17.1|CSPLA_RICCO RecName: Full=CASP-like protein RCOM_1446020 gi|223547887|gb|EEF49379.1| conserved hypothetical protein [Ricinus communis]

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/166 (55%), Positives = 122/166 (73%), Gaps = 3/166 (1%)

Query: 15  WPWSNKR-FFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFG 73
           +P   KR FF+AQ+  RILA AF++A++S M+T  Q V+VF +     YS SSA+RFL G
Sbjct: 23  YPSQPKRIFFMAQVIFRILAIAFAVASISAMVTSDQNVIVFGMDTAARYSYSSAFRFLVG 82

Query: 74  ANIVTCILSVLSLIFVCLISLSASHM--KYFLLFLHDMVTMVLLISGCAAASAIGYVGKY 131
           AN V C  SVLSLIFVCL+S  +  +  K + LFLHDMV MV+++SGC+AA+AIGYVG+Y
Sbjct: 83  ANAVVCGFSVLSLIFVCLMSRRSEAILEKNYYLFLHDMVMMVMMVSGCSAATAIGYVGRY 142

Query: 132 GELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKL 177
           GE ++ W  VC F  KFCN++ +S+VL+YLA  CY+ LT L+AHKL
Sbjct: 143 GEKEITWTAVCDFVGKFCNQALVSIVLAYLALFCYVALTTLAAHKL 188

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224055803|ref|XP_002298661.1| predicted protein [Populus trichocarpa] gi|341958564|sp|B9GFG6.1|CSPLF_POPTR RecName: Full=CASP-like protein POPTRDRAFT_752786 gi|222845919|gb|EEE83466.1| predicted protein [Populus trichocarpa]

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/167 (48%), Positives = 110/167 (65%), Gaps = 1/167 (0%)

Query: 18  SNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIV 77
           S +   +AQITLR LA AF++ A+ +MIT  + V +  + +  +Y  SSA +FL G N  
Sbjct: 27  SQRSRILAQITLRFLAIAFTVTAIPVMITAKEPVSLLGLAITPSYKQSSAMKFLLGVNAT 86

Query: 78  TCILSVLSLIFVCLISLSASH-MKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKM 136
               + LS++FV  +  S S  + YF L LHDMV  +LLISGCAAA+A+GY+ +YG+ + 
Sbjct: 87  VFAFTALSMLFVWPLRRSGSKPINYFFLHLHDMVMTLLLISGCAAATAVGYLSQYGQPET 146

Query: 137 GWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLSRATE 183
            W P+C    KFC++  IS VLSYLAF CY+ L ILS HKL+SRATE
Sbjct: 147 YWSPICDIVKKFCHQMLISTVLSYLAFFCYLALNILSVHKLMSRATE 193

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356561389|ref|XP_003548964.1| PREDICTED: CASP-like protein RCOM_1446020-like [Glycine max]

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 74/160 (46%), Positives = 112/160 (70%)

Query: 24  VAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSV 83
           +AQ  LRI+ T  S A++++M+T  QTVL+F ++ +  +  S +++F   AN V   LS+
Sbjct: 1   MAQDILRIIPTLLSAASIAVMVTNNQTVLIFAIRFQAHFYYSPSFKFFVAANGVVVALSL 60

Query: 84  LSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCG 143
           L+L+   L+   AS   +F LFLHD+V MVLLI+GCAAA+AIGYVG++GE  +GW P+C 
Sbjct: 61  LTLVLNFLMKRQASPRYHFFLFLHDIVMMVLLIAGCAAATAIGYVGQFGEDHVGWQPICD 120

Query: 144 FAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLSRATE 183
              KFC  + +SL+LSY AF+ Y G+T+LSA+K++S + +
Sbjct: 121 HVRKFCTTNLVSLLLSYFAFISYFGITLLSAYKIVSSSPK 160

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519157|gb|AFK47640.1| unknown [Lotus japonicus]

 Score =  152 bits (385), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/173 (45%), Positives = 115/173 (66%), Gaps = 4/173 (2%)

Query: 11  SSSSWPWSNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRF 70
           + S+    +  F + Q  LRILA     A++++M+T  QTV +F ++++  +  S++ +F
Sbjct: 13  TQSTSTSQHSTFLMVQNILRILAIVLLAASIAVMVTNNQTVSIFSIRLEAHFYYSTSLKF 72

Query: 71  LFGANIVTCILSVLSLIFVC-LISLSASHMK---YFLLFLHDMVTMVLLISGCAAASAIG 126
           L  AN V CI+SVL+L+ V  L+   A   K   YF LF+HDMV  +LL++GCAAA+AIG
Sbjct: 73  LVAANGVVCIMSVLTLMIVNYLLRQQAPQQKVYHYFFLFVHDMVMTLLLMAGCAAATAIG 132

Query: 127 YVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLS 179
           YVG+YGE  MGW P+C    KFC  + +SL+LSYLAF  Y+GLTIL+ H+ +S
Sbjct: 133 YVGQYGEQHMGWLPMCDHVRKFCKTNLVSLLLSYLAFFAYLGLTILTVHRSIS 185

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540101|ref|XP_002511115.1| conserved hypothetical protein [Ricinus communis] gi|288559190|sp|B9RA90.1|CSPL8_RICCO RecName: Full=CASP-like protein RCOM_1504680 gi|223550230|gb|EEF51717.1| conserved hypothetical protein [Ricinus communis]

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 118/176 (67%), Gaps = 5/176 (2%)

Query: 3   VETAAAKYSSSSWPWSNKRFFV-AQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVT 61
           +E    KY+S   P  +++ F+ AQI LRI+    +LAA  +M+T  Q++      M   
Sbjct: 1   MENVEDKYNS---PLKSQKLFIGAQICLRIVTIGATLAATWIMVTDKQSITFGDFVMVAK 57

Query: 62  YSSSSAWRFLFGANIVTCILSVLSLIFVCLISLSASHMKY-FLLFLHDMVTMVLLISGCA 120
           Y+ SSA++F   AN++ C  SV+SL+F+C +   +S+  + FLLFLHD++ M L+++GC+
Sbjct: 58  YNYSSAFKFFVLANVIACACSVVSLLFLCALGRYSSNPGHVFLLFLHDLLMMSLVLAGCS 117

Query: 121 AASAIGYVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHK 176
           AA+AIG++GKYG  K GW P+C    +FCNR TIS++LSYL+ +C + LT+ SA+K
Sbjct: 118 AATAIGFLGKYGNTKSGWMPICDQFGQFCNRGTISMMLSYLSMVCLLILTVTSANK 173

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451553|ref|XP_002274297.1| PREDICTED: UPF0497 membrane protein 7 [Vitis vinifera] gi|226713177|sp|A7PA04.1|CSPL6_VITVI RecName: Full=CASP-like protein VIT_14s0068g01400

 Score =  142 bits (357), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 109/167 (65%), Gaps = 3/167 (1%)

Query: 11  SSSSWPWSNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRF 70
            +SS P     FF+AQ+ LR    AF+ AA+++M+T  +TV VF +   V YS  SA++F
Sbjct: 19  EASSPPQMG--FFIAQVVLRFFTLAFTGAAIAVMVTAKETVEVFSISFTVRYSYLSAFKF 76

Query: 71  LFGANIVTCILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGK 130
           L GA+ V C  S+LSLIFV + +   S+  YF L+ HD++ MVL +S CAAA+A+GYVG+
Sbjct: 77  LVGADAVVCGFSMLSLIFVSIFNKGKSN-HYFFLYFHDLILMVLSMSACAAATAVGYVGR 135

Query: 131 YGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKL 177
           YG+ K  W  VCG    FC+++  S++LS + F+C   LTI++A  L
Sbjct: 136 YGQDKAAWMAVCGNVKMFCDKALASILLSLIGFICLFLLTIMAARNL 182

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147785052|emb|CAN77740.1| hypothetical protein VITISV_043317 [Vitis vinifera]

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 108/167 (64%), Gaps = 3/167 (1%)

Query: 11  SSSSWPWSNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRF 70
            +SS P     FF+AQ+ LR    AF+ AA+++M+T  +TV VF +   V YS  SA++F
Sbjct: 19  EASSPPQMG--FFIAQVVLRFFTLAFTGAAIAVMVTAKETVEVFSISFTVRYSYLSAFKF 76

Query: 71  LFGANIVTCILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGK 130
           L GA+ V C  S+LSLIFV + +   S+  YF L+ HD++ MVL +S CAAA+A+GYVG+
Sbjct: 77  LVGADAVVCGFSMLSLIFVSIFNKGKSN-HYFFLYFHDLILMVLSMSACAAATAVGYVGR 135

Query: 131 YGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKL 177
           YG+ K  W  VCG    FC+++  S++LS + F C   LTI++A  L
Sbjct: 136 YGQDKAAWMAVCGNVKMFCDKALASILLSLIGFXCLFLLTIMAARNL 182

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357508281|ref|XP_003624429.1| hypothetical protein MTR_7g083120 [Medicago truncatula] gi|355499444|gb|AES80647.1| hypothetical protein MTR_7g083120 [Medicago truncatula]

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 110/174 (63%), Gaps = 3/174 (1%)

Query: 9   KYSSSSWPWSNKR-FFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSA 67
           K S++S    + R F + Q  LRIL    +  ++ + +T  Q+V++F ++ +  +  +S+
Sbjct: 13  KSSTTSTSQKHHRTFLMVQNILRILVIVLTAVSIVVTVTNNQSVMLFSIRFEAHFYYTSS 72

Query: 68  WRFLFGANIVTCILSVLSLIFVCLISLSASHMK--YFLLFLHDMVTMVLLISGCAAASAI 125
           ++F   AN V C +SVL+LIF  L+       K  YFLLFL D+V  VLLI+GC+AA+A+
Sbjct: 73  FKFFVAANGVVCFMSVLTLIFNLLMRQQTPQRKDYYFLLFLVDLVMTVLLIAGCSAATAV 132

Query: 126 GYVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLS 179
           GYVG+YGE  +GW  +C    KFC  + ISL+LSYLAF   +GLTIL A+K  S
Sbjct: 133 GYVGQYGEKHVGWTAICDHVQKFCKTNLISLLLSYLAFFANLGLTILIAYKFTS 186

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456445|ref|XP_002280714.1| PREDICTED: UPF0497 membrane protein 8 [Vitis vinifera]

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 108/170 (63%), Gaps = 1/170 (0%)

Query: 8   AKYSSSSWPWSNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSA 67
           AK+  +    ++K F  A I LRIL    +L A  +MIT  QTV V+ +Q++  YS SSA
Sbjct: 6   AKFQQNPPLGTHKLFLGAHICLRILTVTATLTAAWMMITSKQTVEVYGIQVEAKYSYSSA 65

Query: 68  WRFLFGANIVTCILSVLSLIFV-CLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIG 126
           ++F   AN + C  SVL+L     L    ++ MK+F LFLHD+  M L+++GCAAA+AIG
Sbjct: 66  FKFFSYANAIACGCSVLTLFPAFSLFYRGSTPMKFFFLFLHDLCMMSLVLAGCAAATAIG 125

Query: 127 YVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHK 176
           YVG+YG    GW  +C    ++CNR  +SL+ SYLAF+  + LTI+SA+K
Sbjct: 126 YVGRYGNNHAGWMAICDQFDEYCNRIRLSLMFSYLAFVFILMLTIMSANK 175

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|341940410|sp|A7PHN8.2|CSPL4_VITVI RecName: Full=CASP-like protein VIT_17s0000g00560 gi|297734485|emb|CBI15732.3| unnamed protein product [Vitis vinifera]

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 108/170 (63%), Gaps = 1/170 (0%)

Query: 8   AKYSSSSWPWSNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSA 67
           AK+  +    ++K F  A I LRIL    +L A  +MIT  QTV V+ +Q++  YS SSA
Sbjct: 31  AKFQQNPPLGTHKLFLGAHICLRILTVTATLTAAWMMITSKQTVEVYGIQVEAKYSYSSA 90

Query: 68  WRFLFGANIVTCILSVLSLIFV-CLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIG 126
           ++F   AN + C  SVL+L     L    ++ MK+F LFLHD+  M L+++GCAAA+AIG
Sbjct: 91  FKFFSYANAIACGCSVLTLFPAFSLFYRGSTPMKFFFLFLHDLCMMSLVLAGCAAATAIG 150

Query: 127 YVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHK 176
           YVG+YG    GW  +C    ++CNR  +SL+ SYLAF+  + LTI+SA+K
Sbjct: 151 YVGRYGNNHAGWMAICDQFDEYCNRIRLSLMFSYLAFVFILMLTIMSANK 200

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
TAIR|locus:2117308	170	AT4G25040 "AT4G25040" [Arabido	0.803	0.864	0.369	5.3e-24
TAIR|locus:2128776	164	AT4G03540 "AT4G03540" [Arabido	0.814	0.908	0.316	5.3e-17
TAIR|locus:2020773	164	AT1G03700 "AT1G03700" [Arabido	0.797	0.890	0.342	8.6e-17
TAIR|locus:2130494	190	AT4G15620 "AT4G15620" [Arabido	0.825	0.794	0.331	9.8e-16
TAIR|locus:2130509	190	AT4G15630 "AT4G15630" [Arabido	0.830	0.8	0.277	3.3e-15
TAIR|locus:2091045	178	AT3G14380 "AT3G14380" [Arabido	0.825	0.848	0.292	1.1e-14
TAIR|locus:2150986	187	CASP5 "Casparian strip membran	0.874	0.855	0.305	1.5e-12
TAIR|locus:2020297	204	AT1G17200 "AT1G17200" [Arabido	0.901	0.808	0.239	3.1e-12
TAIR|locus:505006479	182	AT4G16442 "AT4G16442" [Arabido	0.863	0.868	0.25	6.4e-12
UNIPROTKB|A2Y2B7	162	BLE3 "CASP-like protein BLE3"	0.770	0.870	0.292	2.2e-11

TAIR|locus:2117308 AT4G25040 "AT4G25040" [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 55/149 (36%), Positives = 91/149 (61%)

Query:    26 QITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLS 85
             Q+++R+L    ++A++ +MIT  +   V+ +  +  YS SSA+R+L  A I  C  ++ +
Sbjct:    18 QVSMRVLTIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAFRYLVYAQIAVCAATLFT 77

Query:    86 LIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFA 145
             L++ CL       +  F LF  D++T +  IS  +AA A GYVGKYG  + GW P+CG+ 
Sbjct:    78 LVWACLAVRRRGLV--FALFFFDLLTTLTAISAFSAAFAEGYVGKYGNKQAGWLPICGYV 135

Query:   146 PKFCNRSTISLVLSYLAFLCYMGLTILSA 174
               +C+R TISL +S+ +F+    LT+L+A
Sbjct:   136 HGYCSRVTISLAMSFASFILLFILTVLTA 164

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2128776 AT4G03540 "AT4G03540" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 49/155 (31%), Positives = 87/155 (56%)

Query:    24 VAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSV 83
             +  + LR+ A   +LAA+ +MIT  +      + ++  Y+  +A+++   AN V  + S 
Sbjct:     8 IGGLVLRLAAFGAALAALIVMITSRERASFLAISLEAKYTDMAAFKYFVIANAVVSVYSF 67

Query:    84 LSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCG 143
             L ++F+   SL    +  F++ L D+V  +LL S  +AA A+  VGK G    GW P+CG
Sbjct:    68 L-VLFLPKESL----LWKFVVVL-DLVMTMLLTSSLSAALAVAQVGKKGNANAGWLPICG 121

Query:   144 FAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLL 178
               PKFC++ T +L+  ++A + Y+ L + S H ++
Sbjct:   122 QVPKFCDQITGALIAGFVALVLYVLLLLYSLHAVV 156

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2020773 AT1G03700 "AT1G03700" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 52/152 (34%), Positives = 83/152 (54%)

Query:    27 ITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLSL 86
             + LR  A   +L AV  MIT  +    F++ +   YS  +A+++   AN +  + S L +
Sbjct:    11 LVLRFAAFCAALGAVIAMITSRERSSFFVISLVAKYSDLAAFKYFVIANAIVTVYSFL-V 69

Query:    87 IFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFAP 146
             +F+   SL    +  F++ L  MVTM LL S  +AA A+  VGK G    GW P+CG  P
Sbjct:    70 LFLPKESL----LWKFVVVLDLMVTM-LLTSSLSAAVAVAQVGKRGNANAGWLPICGQVP 124

Query:   147 KFCNRSTISLVLSYLAFLCYMGLTILSAHKLL 178
             +FC++ T +L+   +A + Y+ L I S H ++
Sbjct:   125 RFCDQITGALIAGLVALVLYVFLLIFSIHHVV 156

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2130494 AT4G15620 "AT4G15620" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 54/163 (33%), Positives = 88/163 (53%)

Query:    26 QITLRILATAFSLAAVSLMITGTQTVLVFL--------VQMKVTYSSS--SAWRFLFGAN 75
             ++T+R+LA   ++AA +++    QT +V +        + +  T  +S  SA+ +    N
Sbjct:    28 ELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAFVYNISVN 87

Query:    76 IVTCILSVLSLIFVCLISLSASHMKYFLL-FLHDMVTMVLLISGCAAASAIGYVGKYGEL 134
              + C  + +S I + +IS      K  ++  L D+V + LL SG  AASAIG +G +G  
Sbjct:    88 AIACGYTAIS-IAILMISRGRRSKKLLMVVLLGDLVMVALLFSGTGAASAIGLMGLHGNK 146

Query:   135 KMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKL 177
              + W  VCG   KFC+R+  SL L+ LA + +M L +L A KL
Sbjct:   147 HVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFMFLVVLDAIKL 189

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2130509 AT4G15630 "AT4G15630" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 45/162 (27%), Positives = 86/162 (53%)

Query:    26 QITLRILATAFSLAAVSLMITGTQTVLVFL--------VQMKVTYSSS--SAWRFLFGAN 75
             ++T+R+LA   ++ A +++    QT +V +        + +  T  +S  SA+ +   AN
Sbjct:    28 ELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISAN 87

Query:    76 IVTCILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELK 135
              + C  + +S++ V +     S      + + D++ + LL S   AA AIG +G++G   
Sbjct:    88 AIACGYTAISIVIVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGRHGNKH 147

Query:   136 MGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKL 177
             + W  VCG   KFCN++ +S+ ++ +A + +M L +L A KL
Sbjct:   148 VMWKKVCGVFGKFCNQAAVSVAITLIASVVFMLLVVLDALKL 189

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0043424 "protein histidine kinase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2091045 AT3G14380 "AT3G14380" [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 46/157 (29%), Positives = 85/157 (54%)

Query:    25 AQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVL 84
             A+  LR+ + A S+  + +MI  +    +      V+YS+  A+ +L  AN V    S+L
Sbjct:    23 AEAVLRVASMALSITGLVIMIKNS----ISNEFGSVSYSNIGAFMYLVSANGVCAAYSLL 78

Query:    85 SLIFVCLISLSASHMKYFLLFLHD-MVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCG 143
             S + +  +    S ++   LFL D +VT V+L +G  +A  + Y+  YG + + W   C 
Sbjct:    79 SALAILALPCPISKVQVRTLFLLDQVVTYVVLAAGAVSAETV-YLAYYGNIPITWSSACD 137

Query:   144 FAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLSR 180
                 FC+ + IS+V +++  L YM L+++S+++L +R
Sbjct:   138 SYGSFCHNALISVVFTFVVSLLYMLLSLISSYRLFTR 174

GO:0016020 "membrane" evidence=ISS

GO:0010227 "floral organ abscission" evidence=IEP

TAIR|locus:2150986 CASP5 "Casparian strip membrane domain protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 51/167 (30%), Positives = 85/167 (50%)

Query:    19 NKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVF--LVQMKVTYSSSSAWRFLFGANI 76
             ++R  + +  LRI+A   ++ +  LM T  +T+  F   ++ +  Y+   A  F   AN 
Sbjct:    22 SRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVANA 81

Query:    77 VTC---ILSVLSLIFVCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGE 133
             V     ILS L+L FV ++     + +  L+ L D+  + LL SG ++A+AI Y+   G 
Sbjct:    82 VVSGYLILS-LTLAFVHIVKRKTQNTRILLIIL-DVAMLGLLTSGASSAAAIVYLAHNGN 139

Query:   134 LKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLSR 180
              K  W  +C     FC R + SL+ S++A +  + L +LSA  L  R
Sbjct:   140 NKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSRR 186

GO:0005739 "mitochondrion" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2020297 AT1G17200 "AT1G17200" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 41/171 (23%), Positives = 90/171 (52%)

Query:    11 SSSSWPWSNKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRF 70
             ++  W  ++     A+  LR+      +AA+ +M+  ++T   F     ++YS+ +A+R+
Sbjct:    19 ATEKWEETSLGIRTAETMLRLAPVGLCVAALVVMLKDSETN-EF---GSISYSNLTAFRY 74

Query:    71 LFGANIVTCILSVLSLIFVCLISLSASHMKYFLLF-LHDMVTMVLLISGCAAASAIGYVG 129
             L  AN +    S+LS     +   S++  + +  F L  ++T ++L +G  +A  + Y+ 
Sbjct:    75 LVHANGICAGYSLLSAAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVL-YLA 133

Query:   130 KYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKLLSR 180
               G+  + W   C     FC+R+T S+++++     Y+ L+++S++KL +R
Sbjct:   134 YNGDSAITWSDACSSYGGFCHRATASVIITFFVVCFYIVLSLISSYKLFTR 184

GO:0005515 "protein binding" evidence=IPI

GO:0080167 "response to karrikin" evidence=IEP

GO:0006949 "syncytium formation" evidence=RCA

TAIR|locus:505006479 AT4G16442 "AT4G16442" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 41/164 (25%), Positives = 79/164 (48%)

Query:    19 NKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVT 78
             ++R  + ++ LR   + F+L A+ L++T T+  L+F ++    Y+   A  FL  AN + 
Sbjct:     5 DRRMRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVANGIA 64

Query:    79 CILSVLSLIFVCLISLSASHMKY-----FLLFLHDMVTMVLLISGCAAASAIGYVGKYGE 133
              + S+L  +  C++      + +     +  F  D     L ++  AA +  G + + GE
Sbjct:    65 AVYSLLQSVR-CVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAREGE 123

Query:   134 LKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKL 177
               + W  VC    KFCN+  I +  + LA +  + ++ +SA  L
Sbjct:   124 EDLQWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSL 167

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|A2Y2B7 BLE3 "CASP-like protein BLE3" [Oryza sativa Indica Group (taxid:39946)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 43/147 (29%), Positives = 68/147 (46%)

Query:    29 LRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLSLIF 88
             LR+ A A +  A  +M+T  +T   F +QM+  YS + ++ F   A  V    S+L L  
Sbjct:    12 LRLAAAAAAATAAVVMVTSRETTSFFGIQMEAKYSYTPSFIFFVVAYAVAAAYSLLVLAV 71

Query:    89 VCLISLSASHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFAPKF 148
                 +LS       L    D+V  ++L    A+A AI  + K G    GW PVCG    +
Sbjct:    72 PAGSALSR------LALTTDVVLGMVLAGAVASAGAISDIAKNGNSHAGWLPVCGQIHAY 125

Query:   149 CNRSTISLVLSYLAFLCYMGLTILSAH 175
             CN    +L+  ++A   +  + + S H
Sbjct:   126 CNHVMAALIAGFVALAVHFVVVMYSLH 152

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0009741 "response to brassinosteroid stimulus" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B9RH17	CSPLA_RICCO	No assigned EC number	0.5542	0.8907	0.8109	N/A	no
A7PA04	CSPL6_VITVI	No assigned EC number	0.4491	0.8961	0.8677	yes	no
Q9M0L3	CSPLR_ARATH	No assigned EC number	0.3691	0.8032	0.8647	yes	no
B9GFG6	CSPLF_POPTR	No assigned EC number	0.4850	0.9071	0.8601	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	183
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	3e-31
TIGR01569	154	TIGR01569, A_tha_TIGR01569, plant integral membran	1e-25

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score =  110 bits (276), Expect = 3e-31
 Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 3/150 (2%)

Query: 19  NKRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVT 78
            +   +A++ LR+ A   +LAA  +M T  QT   F +Q K ++S   A+R+L  AN + 
Sbjct: 1   GRPLRLAELVLRLAAFVLALAAAVVMGTNKQTKPFFFIQKKASFSDLPAFRYLVVANAIA 60

Query: 79  CILSVLSLIF-VCLISLSASHMKY--FLLFLHDMVTMVLLISGCAAASAIGYVGKYGELK 135
              S+L L+  V L+S      K   +LLF+ D V   LL++  +AA+AI Y+ + G   
Sbjct: 61  AGYSLLQLVLSVYLLSRKKPRTKGLAWLLFILDQVMAYLLLAAASAAAAIVYLARNGNSH 120

Query: 136 MGWGPVCGFAPKFCNRSTISLVLSYLAFLC 165
             W  +C    +FCNR+  S+ LS+LAFL 
Sbjct: 121 ANWMKICNQFGRFCNRAAASVALSFLAFLL 150

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

>gnl|CDD|233471 TIGR01569, A_tha_TIGR01569, plant integral membrane protein TIGR01569

 Score = 95.5 bits (238), Expect = 1e-25
 Identities = 59/155 (38%), Positives = 88/155 (56%), Gaps = 5/155 (3%)

Query: 27  ITLRILATAFSLAAVSLMITGTQTVLVFL--VQMKVTYSSSSAWRFLFGANIVTCILSVL 84
           + LR+LA + +LAA  +M T  +T +VF+  +  K  +S   A+ +   AN + C  S+L
Sbjct: 1   LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLL 60

Query: 85  SLIFVCLISLSASHMKYFL--LFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVC 142
           S + V +  L    + + L  LF  D+V + LL SG +AA+A+ YVGK G  + GW  +C
Sbjct: 61  S-LVVSIFGLLKRRVFFKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKIC 119

Query: 143 GFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKL 177
           G   KFC+R   SL LS  A +  + L+ILSA  L
Sbjct: 120 GVFGKFCDRIAGSLALSLFAVILLVLLSILSAISL 154

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized. Length = 154

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	183
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	100.0
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	100.0
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	98.55

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=100.00  E-value=3.1e-45  Score=289.13  Aligned_cols=151  Identities=38%  Similarity=0.590  Sum_probs=141.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccceeEEEe--eEEEEEecchhhHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCccchhhh
Q 030053           27 ITLRILATAFSLAAVSLMITGTQTVLVFL--VQMKVTYSSSSAWRFLFGANIVTCILSVLSLIFVC-LISLSASHMKYFL  103 (183)
Q Consensus        27 l~LR~~a~~~sl~a~~vM~t~~q~~~~~~--~~~~a~f~~~~af~ylv~an~I~~~Ys~lql~~~~-~~~~~~~~~~~~~  103 (183)
                      ++||+++++++++|+++|+||+|+.++++  +++++||+|+++|+|+|++|+|+|+|+++|+++.+ .+.+++.+...|+
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~~~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~~~~~~~~~   80 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKRRVFFKLIA   80 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeecccceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence            46999999999999999999999999987  89999999999999999999999999999999865 3444444466999


Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHHHHhcCccccCcccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 030053          104 LFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKL  177 (183)
Q Consensus       104 ~f~~Dqv~ayLl~saasAA~~v~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Sv~~sflA~~~~~~~s~iS~~~L  177 (183)
                      +|++||+++|+++||++||+++++++|+||+|.+|+|+|+++++||||+++|++++|+|++++++++++|++++
T Consensus        81 ~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~~~~FC~~~~~sl~~s~~a~v~~~llsv~Sa~~~  154 (154)
T TIGR01569        81 LFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAISL  154 (154)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999975

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=100.00  E-value=7.7e-40  Score=256.36  Aligned_cols=146  Identities=39%  Similarity=0.683  Sum_probs=135.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhccceeEEEeeEEEEEecchhhHHHHHHHHHHHHHHHHHHHHHHH-HHhcC--C
Q 030053           20 KRFFVAQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLSLIFVC-LISLS--A   96 (183)
Q Consensus        20 r~~~~~~l~LR~~a~~~sl~a~~vM~t~~q~~~~~~~~~~a~f~~~~af~ylv~an~I~~~Ys~lql~~~~-~~~~~--~   96 (183)
                      |..+..+++||+++++++++|+++|++|+|+.++.+++.+++|+|+++|+|++++|+|+|+|+++|++... .+.++  .
T Consensus         1 ~~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~~~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~~~~~~~~~   80 (149)
T PF04535_consen    1 RSLRIASLVLRLLAFVLSLAALAVMATNKQTVSVFSIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIYSLSRGKLR   80 (149)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhcCCcceeeccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence            45678899999999999999999999999999998899999999999999999999999999999999855 33332  2


Q ss_pred             ccchhhhHhhhHHHHHHHHHHHHHHHHHHHHHHhcCccccCcccccCCcchhhhhHHHHHHHHHHHHHH
Q 030053           97 SHMKYFLLFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLC  165 (183)
Q Consensus        97 ~~~~~~~~f~~Dqv~ayLl~saasAA~~v~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Sv~~sflA~~~  165 (183)
                      .+...|++|++||+++||++||++||+++++++++|+++.+|+++|+.+++||+|+++|++++|+|+++
T Consensus        81 ~~~~~~~~f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~~~~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   81 SKLLAWFLFILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQFGKFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             ccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccchhhHHHHHHHHHHHHHHHHHC
Confidence            267899999999999999999999999999999999999999999999999999999999999999874

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=98.55  E-value=3.5e-06  Score=63.86  Aligned_cols=138  Identities=16%  Similarity=0.162  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccceeEEEeeEEEEEecchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCccchhhh
Q 030053           25 AQITLRILATAFSLAAVSLMITGTQTVLVFLVQMKVTYSSSSAWRFLFGANIVTCILSVLSLIFVCLIS-LSASHMKYFL  103 (183)
Q Consensus        25 ~~l~LR~~a~~~sl~a~~vM~t~~q~~~~~~~~~~a~f~~~~af~ylv~an~I~~~Ys~lql~~~~~~~-~~~~~~~~~~  103 (183)
                      ...++|+++++++++.+.+++....+..      .......++..|.+.+.++...+++.-++...... ........+.
T Consensus         5 ~~~ilR~lq~~~~~i~~~l~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   78 (144)
T PF01284_consen    5 PSGILRILQLVFALIIFGLVASSIATGS------QIYGGSPSACGFALFVAVLSFLYTLIFLLLYLFSLKYRPRIPWPLV   78 (144)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHhccc------cccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchh
Confidence            4679999999999999999998774221      11355667789999999999999877776533211 1111456788


Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHHHHhcCccccCcccccCCcchhhhhHHHHHHHHHHHHHHHHHHHH
Q 030053          104 LFLHDMVTMVLLISGCAAASAIGYVGKYGELKMGWGPVCGFAPKFCNRSTISLVLSYLAFLCYMGLTI  171 (183)
Q Consensus       104 ~f~~Dqv~ayLl~saasAA~~v~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Sv~~sflA~~~~~~~s~  171 (183)
                      ++..|.+++.+-+.+...-+.-....+.+++   ++..+.+.++-|+...++.++++++++.+..+..
T Consensus        79 ~~~~~~v~~il~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~Aa~~f~~~~~~l~~~s~~  143 (144)
T PF01284_consen   79 EFIFDAVFAILWLAAFIALAAYLSDHSCSNT---GNDYSYSGCSRCGAWKAAAAFGFLNWLLFIVSAV  143 (144)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCcccccC---CCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999877775543222222211   2233445567899999999999999999988764

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00