Citrus Sinensis ID: 030081

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180---
Protein Sequence
MTILIDQPHFGVEVQEKKVPIDEKELSLDGGFLVPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFPPPPNPNFLSKIVVDI
Secondary Structure (PSIPRED)
cEEEEcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccEEEEHHHHcccccccccccccccccEEEcccccccccccccccccccEEcc
Secondary Structure Prediction (SSPRO)
cEEEEEcccccHHHcccccccccccEEccccccccccccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccHEHHHHHHHHcccEEEccccccccccEEEccccccccccccccccccEEEcc
Coil and Loop (DISEMBL)
mtilidqphfgvevqekkvpidekelsldggflvpqtnsfghtfrdydaegerqegVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNdvvdesdpdldepqIEHLLQTAEAIrkdypdedwlHLTGLIHDLGkvlnlpsfgglpqwAVVGelhfsfppppnpnflskivvdi
Flexible Loop (DISEMBL)
mtilidqphfgvevqEKKVPIDEKELSLDGGFLVPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSfppppnpnflskivvdi
Low Complexity Region (SEG)
MTILIDQPHFGVEVQEKKVPIDEKELSLDGGFLVPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSfppppnpnfLSKIVVDI
Disordered region (IsUnstruct)
*********FGV************ELSLDGGFLVPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVD**********IEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFP***************
Disordered Region (DISOPRED)
*TIL***P*******************LDGGFLVPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFPPPPNPNFLSKIVVDI
Disordered Region (DISEMBL)
MTILIDQPHFGVEVQEKKVPIDEKELSLDGGFLVPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFPPPPNPNFLSKIVVDI
Disordered Region (DISPRO)
MTILIDQPHFGVEVQEKKV*I**KELSLDGGFLVPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFPPPPNPNFLSKIVVDI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTILIDQPHFGVEVQEKKVPIDEKELSLDGGFLVPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFPPPPNPNFLSKIVVDI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	183	2.2.26 [Sep-21-2011]
Q8L799	311	Inositol oxygenase 1 OS=A	yes	no	0.901	0.530	0.731	2e-65
O82200	317	Inositol oxygenase 2 OS=A	no	no	0.896	0.517	0.692	2e-63
Q5Z8T3	308	Probable inositol oxygena	yes	no	0.896	0.532	0.664	9e-63
Q8H1S0	317	Inositol oxygenase 4 OS=A	no	no	0.901	0.520	0.651	8e-62
Q9FJU4	314	Inositol oxygenase 5 OS=A	no	no	0.885	0.515	0.602	1e-54
Q54GH4	292	Inositol oxygenase OS=Dic	yes	no	0.726	0.455	0.482	3e-29
Q9QXN5	285	Inositol oxygenase OS=Mus	yes	no	0.693	0.445	0.462	2e-26
Q9QXN4	285	Inositol oxygenase OS=Rat	yes	no	0.693	0.445	0.455	3e-26
Q5REY9	285	Inositol oxygenase OS=Pon	yes	no	0.650	0.417	0.476	2e-25
Q9UGB7	285	Inositol oxygenase OS=Hom	yes	no	0.693	0.445	0.455	3e-25

>sp|Q8L799|MIOX1_ARATH Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1

 Score =  247 bits (631), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 128/175 (73%), Positives = 137/175 (78%), Gaps = 10/175 (5%)

Query: 1   MTILID----QPHFGVEVQEKKV---PIDEKELSLDGGFLVPQTNSFGHTFRDYDAEGER 53
           MTILID    Q   G E+ EK       +E EL LD GF  P TNSFG TFRDYDAE ER
Sbjct: 1   MTILIDRHSDQNDAGDEIVEKNQGNGKEEETELVLDAGFEAPHTNSFGRTFRDYDAESER 60

Query: 54  QEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQI 113
           + GVE FYR+NHI QT DFV+KMREEY KLNR EMSIWECCELLN+ +DESDPDLDEPQI
Sbjct: 61  RRGVEEFYRVNHIGQTVDFVRKMREEYEKLNRTEMSIWECCELLNEFIDESDPDLDEPQI 120

Query: 114 EHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFP 168
           EHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVL   SFG LPQWAVVG+   +FP
Sbjct: 121 EHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLLHSSFGELPQWAVVGD---TFP 172

Involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. May be also involved in plant ascorbate biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 3EC: .EC: 9EC: 9EC: .EC: 1

>sp|O82200|MIOX2_ARATH Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2

 Score =  241 bits (614), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 126/182 (69%), Positives = 146/182 (80%), Gaps = 18/182 (9%)

Query: 1   MTILIDQPHFGVEVQEKKVPIDEK--ELSLDGGFLVPQT-----------NSFGHTFRDY 47
           MTIL++       V EKKV I+E+  EL LDGGF+VP++           N  GH+FRDY
Sbjct: 1   MTILVEHFVPDSRVDEKKV-IEERDNELVLDGGFVVPKSKETDAFDAPDMNFLGHSFRDY 59

Query: 48  -DAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDP 106
            + E ERQ+GVE FYR+ HI+QTYDFVKKMR+EYGKLN++EMSIWECCELLN+VVDESDP
Sbjct: 60  ENGESERQQGVEEFYRMQHIHQTYDFVKKMRKEYGKLNKMEMSIWECCELLNNVVDESDP 119

Query: 107 DLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFS 166
           DLDEPQI+HLLQTAEAIR+DYPDEDWLHLT LIHDLGKVL LP FGGLPQWAVVG+   +
Sbjct: 120 DLDEPQIQHLLQTAEAIRRDYPDEDWLHLTALIHDLGKVLLLPEFGGLPQWAVVGD---T 176

Query: 167 FP 168
           FP
Sbjct: 177 FP 178

Involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. May be also involved in plant ascorbate biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q5Z8T3|MIOX_ORYSJ Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1

 Score =  239 bits (609), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 115/173 (66%), Positives = 141/173 (81%), Gaps = 9/173 (5%)

Query: 1   MTILIDQPHFGVEVQEKKVPI-----DEKELSLDGGFLVPQTNSFGHTFRDYDAEGERQE 55
           MTI I+QPH    + ++KV       +  EL LDGGF+VP +N+FG+ FR+Y+AE ER+E
Sbjct: 1   MTITIEQPHLDA-IADRKVAGGGGGDNAAELVLDGGFVVPDSNAFGNAFRNYEAESERKE 59

Query: 56  GVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEH 115
            VE FYR+NHINQTYDFV++MREEYG++++ EM IWEC ELLN+ +D+SDPDLD PQIEH
Sbjct: 60  TVEEFYRVNHINQTYDFVRRMREEYGRVDKTEMGIWECIELLNEFIDDSDPDLDMPQIEH 119

Query: 116 LLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFP 168
           LLQTAEAIRKD+PDEDWLHLTGLIHDLGKVL  PSFG LPQW+VVG+   +FP
Sbjct: 120 LLQTAEAIRKDFPDEDWLHLTGLIHDLGKVLLHPSFGELPQWSVVGD---TFP 169

Involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. May be also involved in plant ascorbate biosynthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q8H1S0|MIOX4_ARATH Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1

 Score =  236 bits (601), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 118/181 (65%), Positives = 137/181 (75%), Gaps = 16/181 (8%)

Query: 1   MTILIDQPHFGVEVQEKKVPIDEKELSLDGGF-------------LVPQTNSFGHTFRDY 47
           MTI +++P F      +K   +  EL LDGGF             L P+ N+FG  FRDY
Sbjct: 1   MTISVEKPIFEEVSAFEKSGDNIGELKLDGGFSMPKMDTNDDEAFLAPEMNAFGRQFRDY 60

Query: 48  DAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPD 107
           D E ERQ+GVE FYR+ HINQT DFVKKMR EYGKL+++ MSIWECCELLN+VVDESDPD
Sbjct: 61  DVESERQKGVEEFYRLQHINQTVDFVKKMRAEYGKLDKMVMSIWECCELLNEVVDESDPD 120

Query: 108 LDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSF 167
           LDEPQI+HLLQ+AEAIRKDYP+EDWLHLT LIHDLGKV+ LP FGGLPQWAVVG+   +F
Sbjct: 121 LDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVITLPQFGGLPQWAVVGD---TF 177

Query: 168 P 168
           P
Sbjct: 178 P 178

Involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. May be also involved in plant ascorbate biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q9FJU4|MIOX5_ARATH Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1

 Score =  212 bits (539), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 109/181 (60%), Positives = 126/181 (69%), Gaps = 19/181 (10%)

Query: 1   MTILIDQPHFGVEVQEKKVPIDEKELSLDGG------------FLVPQTNSFGHTFRDY- 47
           M I ++ P F   V E        EL LD              FL P+ N+FG  FRDY 
Sbjct: 1   MNISVENPVF---VHEDSTTQKTGELRLDSDIPMSKISSDDEVFLAPEMNAFGRQFRDYT 57

Query: 48  DAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPD 107
           D   ERQ+ VE+FY   H NQT DFV+KMR EYGKL+++ M+IWECCEL  +VVDESDPD
Sbjct: 58  DTNSERQKSVEHFYATQHTNQTLDFVQKMRSEYGKLDKMVMNIWECCELSKEVVDESDPD 117

Query: 108 LDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSF 167
           LDEPQI+HLLQ+AEAIRKDYP+EDWLHLT LIHDLGKVL LP FGGLPQWAVVG+   +F
Sbjct: 118 LDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVLTLPQFGGLPQWAVVGD---TF 174

Query: 168 P 168
           P
Sbjct: 175 P 175

Involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. May be also involved in plant ascorbate biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q54GH4|MIOX_DICDI Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1

 Score =  127 bits (320), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/145 (48%), Positives = 91/145 (62%), Gaps = 12/145 (8%)

Query: 27  SLDGGFLVPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLN-R 85
           SL  GF + +       FR+Y+   +R   V   YR +H  QTYD+  + +++Y +L+  
Sbjct: 18  SLKTGFEITKE---VEEFRNYENSEDR---VSEAYRNSHTYQTYDYATEKKKQYSQLDTS 71

Query: 86  VEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDE--DWLHLTGLIHDLG 143
           ++M +WE  ELLN ++DESDPD + PQI H LQTAEAIRK YPD   DW HLTG IHDLG
Sbjct: 72  IKMGLWEAAELLNTIIDESDPDSNIPQINHCLQTAEAIRKVYPDSKYDWFHLTGFIHDLG 131

Query: 144 KVLNLPSFGGLPQWAVVGELHFSFP 168
           KVL    F   PQWA VG+   +FP
Sbjct: 132 KVLLSKKFKEQPQWATVGD---TFP 153

Dictyostelium discoideum (taxid: 44689)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q9QXN5|MIOX_MOUSE Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV=2

 Score =  118 bits (296), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 7/134 (5%)

Query: 35  PQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECC 94
           P+      +FR+Y   G   + V   Y++ H +QT DFV + R +YG  +  +M+I E  
Sbjct: 19  PEMAKSKDSFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIMEAV 77

Query: 95  ELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGL 154
            +L+D+VDESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGK++ L    G 
Sbjct: 78  GMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKIMAL---WGE 134

Query: 155 PQWAVVGELHFSFP 168
           PQWAVVG+   +FP
Sbjct: 135 PQWAVVGD---TFP 145

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q9QXN4|MIOX_RAT Inositol oxygenase OS=Rattus norvegicus GN=Miox PE=2 SV=2

 Score =  117 bits (294), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 86/134 (64%), Gaps = 7/134 (5%)

Query: 35  PQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECC 94
           P+      +FR+Y   G   + V   Y++ H +QT DFV + R ++G  +  +M++ E  
Sbjct: 19  PEMAKSKGSFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVMRKRIQFGSFSYKKMTVMEAV 77

Query: 95  ELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGL 154
           ++L+D+VDESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGK+L L    G 
Sbjct: 78  DMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKILAL---WGE 134

Query: 155 PQWAVVGELHFSFP 168
           PQWAVVG+   +FP
Sbjct: 135 PQWAVVGD---TFP 145

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q5REY9|MIOX_PONAB Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV=1

 Score =  115 bits (287), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/126 (47%), Positives = 82/126 (65%), Gaps = 7/126 (5%)

Query: 43  TFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVD 102
           +FR+Y   G   + V   Y++ H +QT DFV+    ++G  +  +M++ E  +LL+ +VD
Sbjct: 27  SFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVD 85

Query: 103 ESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGE 162
           ESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGKVL L    G PQWAVVG+
Sbjct: 86  ESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL---FGEPQWAVVGD 142

Query: 163 LHFSFP 168
              +FP
Sbjct: 143 ---TFP 145

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q9UGB7|MIOX_HUMAN Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV=1

 Score =  114 bits (286), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 84/134 (62%), Gaps = 7/134 (5%)

Query: 35  PQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECC 94
           P+      +FR+Y   G   + V   Y++ H +QT DFV+    ++G  +  +M++ E  
Sbjct: 19  PEVAKDKASFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAV 77

Query: 95  ELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGL 154
           +LL+ +VDESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGKVL L    G 
Sbjct: 78  DLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL---FGE 134

Query: 155 PQWAVVGELHFSFP 168
           PQWAVVG+   +FP
Sbjct: 135 PQWAVVGD---TFP 145

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 9

EC: 9

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
388493838	305	unknown [Lotus japonicus]	0.901	0.540	0.840	1e-76
388490982	274	unknown [Lotus japonicus]	0.901	0.602	0.840	2e-76
388522589	305	unknown [Medicago truncatula]	0.896	0.537	0.836	2e-75
255635830	335	unknown [Glycine max]	0.901	0.492	0.817	5e-74
356522820	306	PREDICTED: inositol oxygenase 1-like [Gl	0.901	0.539	0.817	5e-74
356526059	306	PREDICTED: inositol oxygenase 1-like [Gl	0.890	0.532	0.830	8e-74
225442398	304	PREDICTED: inositol oxygenase 1 [Vitis v	0.901	0.542	0.797	2e-72
255634747	252	unknown [Glycine max]	0.901	0.654	0.794	8e-72
350538319	317	myo-inositol oxygenase [Solanum lycopers	0.901	0.520	0.718	2e-70
449435800	313	PREDICTED: inositol oxygenase 2-like [Cu	0.885	0.517	0.76	1e-68

>gi|388493838|gb|AFK34985.1| unknown [Lotus japonicus]

 Score =  290 bits (743), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 142/169 (84%), Positives = 154/169 (91%), Gaps = 4/169 (2%)

Query: 1   MTILIDQP-HFGVEVQEKKVPIDEKELSLDGGFLVPQTNSFGHTFRDYDAEGERQEGVEN 59
           MTI+IDQP HFG +V+ K VPIDEKEL LDGGF++P TNSFGHTFRDY+AE ERQEGVEN
Sbjct: 1   MTIIIDQPDHFGSDVEGKTVPIDEKELVLDGGFVMPHTNSFGHTFRDYNAESERQEGVEN 60

Query: 60  FYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQT 119
           FYR NHI Q+ DFVKKMREEYGKLNRVEMS+WECCELLN+VVDESDPDLDEPQIEHLLQT
Sbjct: 61  FYRKNHIYQSVDFVKKMREEYGKLNRVEMSMWECCELLNEVVDESDPDLDEPQIEHLLQT 120

Query: 120 AEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFP 168
           AEAIRKDYP+EDWLHLTGLIHDLGKVL LP FGGLPQWAVVG+   +FP
Sbjct: 121 AEAIRKDYPNEDWLHLTGLIHDLGKVLLLPVFGGLPQWAVVGD---TFP 166

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388490982|gb|AFK33557.1| unknown [Lotus japonicus]

 Score =  290 bits (741), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 142/169 (84%), Positives = 154/169 (91%), Gaps = 4/169 (2%)

Query: 1   MTILIDQP-HFGVEVQEKKVPIDEKELSLDGGFLVPQTNSFGHTFRDYDAEGERQEGVEN 59
           MTI+IDQP HFG +V+ K VPIDEKEL LDGGF++P TNSFGHTFRDY+AE ERQEGVEN
Sbjct: 1   MTIIIDQPDHFGSDVEGKTVPIDEKELVLDGGFVMPHTNSFGHTFRDYNAESERQEGVEN 60

Query: 60  FYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQT 119
           FYR NHI Q+ DFVKKMREEYGKLNRVEMS+WECCELLN+VVDESDPDLDEPQIEHLLQT
Sbjct: 61  FYRKNHIYQSVDFVKKMREEYGKLNRVEMSMWECCELLNEVVDESDPDLDEPQIEHLLQT 120

Query: 120 AEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFP 168
           AEAIRKDYP+EDWLHLTGLIHDLGKVL LP FGGLPQWAVVG+   +FP
Sbjct: 121 AEAIRKDYPNEDWLHLTGLIHDLGKVLLLPVFGGLPQWAVVGD---TFP 166

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388522589|gb|AFK49356.1| unknown [Medicago truncatula]

 Score =  286 bits (732), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 138/165 (83%), Positives = 149/165 (90%), Gaps = 1/165 (0%)

Query: 1   MTILIDQP-HFGVEVQEKKVPIDEKELSLDGGFLVPQTNSFGHTFRDYDAEGERQEGVEN 59
           MTILIDQP +FG +V+ K V  +E EL LDGGF+ PQ NSFGHTFRDY AE ERQEGVEN
Sbjct: 1   MTILIDQPDYFGSDVEAKTVVANETELVLDGGFVKPQANSFGHTFRDYAAESERQEGVEN 60

Query: 60  FYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQT 119
           FYR NHI Q++DFVKKMREEYGKLNRVEMSIWECCELLN+VVDESDPDLDEPQIEHLLQT
Sbjct: 61  FYRKNHIYQSFDFVKKMREEYGKLNRVEMSIWECCELLNEVVDESDPDLDEPQIEHLLQT 120

Query: 120 AEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELH 164
           AEAIRKDYP+EDWLHLTGLIHDLGKVL LPSFGGLPQWAVVG+ +
Sbjct: 121 AEAIRKDYPNEDWLHLTGLIHDLGKVLLLPSFGGLPQWAVVGDTY 165

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255635830|gb|ACU18263.1| unknown [Glycine max]

 Score =  282 bits (721), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 139/170 (81%), Positives = 150/170 (88%), Gaps = 5/170 (2%)

Query: 1   MTILIDQP-HFGVEVQEKKVPIDEKELSLDGGFLVPQTNSFGHTFRDY-DAEGERQEGVE 58
           MTILI+Q  HFG EV+ K  PI+E+EL LDGGFL+PQTNSFGH FR Y DA  ER+EGVE
Sbjct: 1   MTILIEQSDHFGAEVEAKTEPINERELVLDGGFLIPQTNSFGHMFRAYNDAVSERREGVE 60

Query: 59  NFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQ 118
           NFYR NH  Q+ DFVKKMREEY KLNRVEMSIWECCELLN+VVDESDPDLDEPQIEHLLQ
Sbjct: 61  NFYRKNHTYQSVDFVKKMREEYAKLNRVEMSIWECCELLNEVVDESDPDLDEPQIEHLLQ 120

Query: 119 TAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFP 168
           TAEAIR+DYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVG+   +FP
Sbjct: 121 TAEAIRRDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGD---TFP 167

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522820|ref|XP_003530041.1| PREDICTED: inositol oxygenase 1-like [Glycine max]

 Score =  282 bits (721), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 139/170 (81%), Positives = 150/170 (88%), Gaps = 5/170 (2%)

Query: 1   MTILIDQP-HFGVEVQEKKVPIDEKELSLDGGFLVPQTNSFGHTFRDY-DAEGERQEGVE 58
           MTILI+Q  HFG EV+ K  PI+E+EL LDGGFL+PQTNSFGH FR Y DA  ER+EGVE
Sbjct: 1   MTILIEQSDHFGAEVEAKTEPINERELVLDGGFLIPQTNSFGHMFRAYNDAVSERREGVE 60

Query: 59  NFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQ 118
           NFYR NH  Q+ DFVKKMREEY KLNRVEMSIWECCELLN+VVDESDPDLDEPQIEHLLQ
Sbjct: 61  NFYRKNHTYQSVDFVKKMREEYAKLNRVEMSIWECCELLNEVVDESDPDLDEPQIEHLLQ 120

Query: 119 TAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFP 168
           TAEAIR+DYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVG+   +FP
Sbjct: 121 TAEAIRRDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGD---TFP 167

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526059|ref|XP_003531637.1| PREDICTED: inositol oxygenase 1-like [Glycine max]

 Score =  281 bits (719), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 137/165 (83%), Positives = 147/165 (89%), Gaps = 2/165 (1%)

Query: 1   MTILIDQP-HFGVEVQEKKVPIDEKELSLDGGFLVPQTNSFGHTFRDY-DAEGERQEGVE 58
           MTILI+Q  HFG EV+ K  PI+E+EL LDGGFL+ QTNSFGH FR Y DAE ER EGVE
Sbjct: 1   MTILIEQSDHFGAEVEAKTEPINERELVLDGGFLITQTNSFGHMFRAYNDAESERHEGVE 60

Query: 59  NFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQ 118
           NFYR NH  Q+ DFVKKMREEY KLNRVEMSIWECCELLN+VVDESDPDLDEPQIEHLLQ
Sbjct: 61  NFYRKNHTYQSIDFVKKMREEYAKLNRVEMSIWECCELLNEVVDESDPDLDEPQIEHLLQ 120

Query: 119 TAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGEL 163
           TAEAIR+DYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVG++
Sbjct: 121 TAEAIRRDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDI 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442398|ref|XP_002282395.1| PREDICTED: inositol oxygenase 1 [Vitis vinifera] gi|297743146|emb|CBI36013.3| unnamed protein product [Vitis vinifera]

 Score =  276 bits (707), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 134/168 (79%), Positives = 149/168 (88%), Gaps = 3/168 (1%)

Query: 1   MTILIDQPHFGVEVQEKKVPIDEKELSLDGGFLVPQTNSFGHTFRDYDAEGERQEGVENF 60
           MTILIDQP F   V++K     E EL LDGGF+VP++N+FGHTFRDYDAE +R++GVENF
Sbjct: 1   MTILIDQPDFVEVVEKKVDVEQENELVLDGGFVVPESNAFGHTFRDYDAESDRKDGVENF 60

Query: 61  YRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTA 120
           YRINHINQTYDFVKKMREEY +LNRV+MSIWECCELLNDVVDESDPDLDEPQIEHLLQTA
Sbjct: 61  YRINHINQTYDFVKKMREEYSRLNRVQMSIWECCELLNDVVDESDPDLDEPQIEHLLQTA 120

Query: 121 EAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFP 168
           EAIRKDYP+EDW+HLT LIHDLGKVL LPSFG LPQWAVVG+   +FP
Sbjct: 121 EAIRKDYPNEDWMHLTALIHDLGKVLLLPSFGELPQWAVVGD---TFP 165

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255634747|gb|ACU17735.1| unknown [Glycine max]

 Score =  275 bits (702), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 139/175 (79%), Positives = 150/175 (85%), Gaps = 10/175 (5%)

Query: 1   MTILIDQP-HFGVEVQEKKVPIDEKELSLDGGFLVPQTNSFGHTFRDY-DAEGERQEGVE 58
           MTILI+Q  HFG EV+ K  PI+E+EL LDGGFL+PQTNSFGH FR Y DA  ER+EGVE
Sbjct: 1   MTILIEQSDHFGAEVEAKTEPINERELVLDGGFLIPQTNSFGHMFRAYNDAVSERREGVE 60

Query: 59  NFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQ 118
           NFYR NH  Q+ DFVKKMREEY KLNRVEMSIWECCELLN+VVDESDPDLDEPQIEHLLQ
Sbjct: 61  NFYRKNHTYQSVDFVKKMREEYAKLNRVEMSIWECCELLNEVVDESDPDLDEPQIEHLLQ 120

Query: 119 TAEAIRKDYPDEDWLHLTGLIH-----DLGKVLNLPSFGGLPQWAVVGELHFSFP 168
           TAEAIR+DYPDEDWLHLTGLIH     DLGKVLNLPSFGGLPQWAVVG+   +FP
Sbjct: 121 TAEAIRRDYPDEDWLHLTGLIHVWLNADLGKVLNLPSFGGLPQWAVVGD---TFP 172

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350538319|ref|NP_001234593.1| myo-inositol oxygenase [Solanum lycopersicum] gi|240248438|gb|ACS45396.1| myo-inositol oxygenase [Solanum lycopersicum]

 Score =  270 bits (690), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 130/181 (71%), Positives = 150/181 (82%), Gaps = 16/181 (8%)

Query: 1   MTILIDQPHFGVEVQEKKVPIDEKELSLDGGFLVPQT-------------NSFGHTFRDY 47
           MTILI+QP FG +V+EKKV  +  EL LDGGF+VP+T             N+FG +FRDY
Sbjct: 1   MTILIEQPEFGSQVEEKKVSFNANELILDGGFMVPKTLSSQDEIFEVPDINAFGQSFRDY 60

Query: 48  DAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPD 107
           + E ERQ+ VE FYR+ HINQTYD+VKKMR+EYGKLN++EMSIW+CCELLNDVVD+SDPD
Sbjct: 61  NVESERQKSVEEFYRVQHINQTYDYVKKMRKEYGKLNKIEMSIWDCCELLNDVVDDSDPD 120

Query: 108 LDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSF 167
           LDEPQIEHLLQTAEAIRKDYP+EDWLHLTGLIHDLGKVL  PSFGGLPQWAVVG+   +F
Sbjct: 121 LDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPSFGGLPQWAVVGD---TF 177

Query: 168 P 168
           P
Sbjct: 178 P 178

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435800|ref|XP_004135682.1| PREDICTED: inositol oxygenase 2-like [Cucumis sativus] gi|449489829|ref|XP_004158428.1| PREDICTED: inositol oxygenase 2-like [Cucumis sativus]

 Score =  264 bits (674), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 133/175 (76%), Positives = 149/175 (85%), Gaps = 13/175 (7%)

Query: 1   MTILIDQPHFGVEVQEKKVPIDE-KELSLDGGFLVP----------QTNSFGHTFRDYDA 49
           MTILI+QPHFG +  EKKV I E KEL LDGGF+VP          + N+FGH+FRDY+A
Sbjct: 1   MTILIEQPHFGED--EKKVGITELKELVLDGGFVVPNAKTEGFAAPEMNAFGHSFRDYEA 58

Query: 50  EGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLD 109
           E ERQ+GVE FYR NHI+QTY+FV+KMREEY K++R EMSIWECCELLNDVVD+SDPDLD
Sbjct: 59  ESERQKGVEEFYRQNHIHQTYEFVEKMREEYKKMDREEMSIWECCELLNDVVDDSDPDLD 118

Query: 110 EPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELH 164
           EPQI+HLLQTAEAIRKDYPDEDWLHLT LIHDLGKVL LPSFGGLPQWAVVG+ H
Sbjct: 119 EPQIQHLLQTAEAIRKDYPDEDWLHLTALIHDLGKVLLLPSFGGLPQWAVVGDTH 173

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
TAIR|locus:2012572	311	MIOX1 "myo-inositol oxygenase	0.885	0.520	0.745	2.3e-62
TAIR|locus:2052015	317	MIOX2 "myo-inositol oxygenase	0.868	0.501	0.713	1.6e-61
TAIR|locus:2165061	314	MIOX5 "myo-inositol oxygenase	0.797	0.464	0.682	2.1e-52
FB|FBgn0036262	292	CG6910 [Drosophila melanogaste	0.633	0.397	0.545	1e-29
DICTYBASE|DDB_G0290161	292	miox "inositol oxygenase" [Dic	0.633	0.397	0.524	2.1e-29
MGI|MGI:1891725	285	Miox "myo-inositol oxygenase"	0.677	0.435	0.468	9.4e-27
RGD|628739	285	Miox "myo-inositol oxygenase"	0.633	0.407	0.483	1.2e-26
UNIPROTKB|E2QTD8	285	MIOX "Uncharacterized protein"	0.633	0.407	0.491	1.9e-26
UNIPROTKB|J9P8P0	330	MIOX "Uncharacterized protein"	0.633	0.351	0.491	1.9e-26
UNIPROTKB|A6PVH2	270	MIOX "Myo-inositol oxygenase,	0.633	0.429	0.491	5.2e-26

TAIR|locus:2012572 MIOX1 "myo-inositol oxygenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
 Identities = 126/169 (74%), Positives = 134/169 (79%)

Query:     1 MTILID----QPHFGVEVQEKKV---PIDEKELSLDGGFLVPQTNSFGHTFRDYDAEGER 53
             MTILID    Q   G E+ EK       +E EL LD GF  P TNSFG TFRDYDAE ER
Sbjct:     1 MTILIDRHSDQNDAGDEIVEKNQGNGKEEETELVLDAGFEAPHTNSFGRTFRDYDAESER 60

Query:    54 QEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQI 113
             + GVE FYR+NHI QT DFV+KMREEY KLNR EMSIWECCELLN+ +DESDPDLDEPQI
Sbjct:    61 RRGVEEFYRVNHIGQTVDFVRKMREEYEKLNRTEMSIWECCELLNEFIDESDPDLDEPQI 120

Query:   114 EHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGE 162
             EHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVL   SFG LPQWAVVG+
Sbjct:   121 EHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLLHSSFGELPQWAVVGD 169

GO:0005506 "iron ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0019310 "inositol catabolic process" evidence=IEA

GO:0050113 "inositol oxygenase activity" evidence=IEA;IMP

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006949 "syncytium formation" evidence=IGI

TAIR|locus:2052015 MIOX2 "myo-inositol oxygenase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
 Identities = 127/178 (71%), Positives = 148/178 (83%)

Query:     1 MTILIDQPHFGVE--VQEKKVPIDEK--ELSLDGGFLVP---QTNSF--------GHTFR 45
             MTIL++  HF  +  V EKKV I+E+  EL LDGGF+VP   +T++F        GH+FR
Sbjct:     1 MTILVE--HFVPDSRVDEKKV-IEERDNELVLDGGFVVPKSKETDAFDAPDMNFLGHSFR 57

Query:    46 DYD-AEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDES 104
             DY+  E ERQ+GVE FYR+ HI+QTYDFVKKMR+EYGKLN++EMSIWECCELLN+VVDES
Sbjct:    58 DYENGESERQQGVEEFYRMQHIHQTYDFVKKMRKEYGKLNKMEMSIWECCELLNNVVDES 117

Query:   105 DPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGE 162
             DPDLDEPQI+HLLQTAEAIR+DYPDEDWLHLT LIHDLGKVL LP FGGLPQWAVVG+
Sbjct:   118 DPDLDEPQIQHLLQTAEAIRRDYPDEDWLHLTALIHDLGKVLLLPEFGGLPQWAVVGD 175

GO:0005506 "iron ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0019310 "inositol catabolic process" evidence=IEA

GO:0050113 "inositol oxygenase activity" evidence=IEA;IMP

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006949 "syncytium formation" evidence=IGI

TAIR|locus:2165061 MIOX5 "myo-inositol oxygenase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 101/148 (68%), Positives = 118/148 (79%)

Query:    16 EKKVPIDEKELSLDGGFLVPQTNSFGHTFRDY-DAEGERQEGVENFYRINHINQTYDFVK 74
             +  +P+  K  S D  FL P+ N+FG  FRDY D   ERQ+ VE+FY   H NQT DFV+
Sbjct:    26 DSDIPMS-KISSDDEVFLAPEMNAFGRQFRDYTDTNSERQKSVEHFYATQHTNQTLDFVQ 84

Query:    75 KMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLH 134
             KMR EYGKL+++ M+IWECCEL  +VVDESDPDLDEPQI+HLLQ+AEAIRKDYP+EDWLH
Sbjct:    85 KMRSEYGKLDKMVMNIWECCELSKEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLH 144

Query:   135 LTGLIHDLGKVLNLPSFGGLPQWAVVGE 162
             LT LIHDLGKVL LP FGGLPQWAVVG+
Sbjct:   145 LTALIHDLGKVLTLPQFGGLPQWAVVGD 172

GO:0005506 "iron ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0019310 "inositol catabolic process" evidence=IEA

GO:0050113 "inositol oxygenase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006949 "syncytium formation" evidence=IGI

FB|FBgn0036262 CG6910 [Drosophila melanogaster (taxid:7227)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 66/121 (54%), Positives = 81/121 (66%)

Query:    44 FRDY--DAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVV 101
             FRDY  D     +E V   YR  H+NQT DFVK  RE + K N ++M++ E  E LND+V
Sbjct:    32 FRDYSMDTTDPLKERVRQTYRQMHLNQTVDFVKGRREHWLKFNTIKMTVREALEKLNDLV 91

Query:   102 DESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVG 161
             DESDPDLD P I H  Q AE  R ++P+ DWLHLT LIHDLGK++   +F G PQWAVVG
Sbjct:    92 DESDPDLDLPNIIHAFQAAERARAEFPEHDWLHLTALIHDLGKIM---AFYGEPQWAVVG 148

Query:   162 E 162
             +
Sbjct:   149 D 149

GO:0050113 "inositol oxygenase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0019310 "inositol catabolic process" evidence=IEA

DICTYBASE|DDB_G0290161 miox "inositol oxygenase" [Dictyostelium discoideum (taxid:44689)]

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 64/122 (52%), Positives = 82/122 (67%)

Query:    44 FRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNR-VEMSIWECCELLNDVVD 102
             FR+Y+   +R   V   YR +H  QTYD+  + +++Y +L+  ++M +WE  ELLN ++D
Sbjct:    32 FRNYENSEDR---VSEAYRNSHTYQTYDYATEKKKQYSQLDTSIKMGLWEAAELLNTIID 88

Query:   103 ESDPDLDEPQIEHLLQTAEAIRKDYPDE--DWLHLTGLIHDLGKVLNLPSFGGLPQWAVV 160
             ESDPD + PQI H LQTAEAIRK YPD   DW HLTG IHDLGKVL    F   PQWA V
Sbjct:    89 ESDPDSNIPQINHCLQTAEAIRKVYPDSKYDWFHLTGFIHDLGKVLLSKKFKEQPQWATV 148

Query:   161 GE 162
             G+
Sbjct:   149 GD 150

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0050113 "inositol oxygenase activity" evidence=IEA

GO:0019310 "inositol catabolic process" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016701 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

MGI|MGI:1891725 Miox "myo-inositol oxygenase" [Mus musculus (taxid:10090)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 60/128 (46%), Positives = 83/128 (64%)

Query:    35 PQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECC 94
             P+      +FR+Y + G   + V   Y++ H +QT DFV + R +YG  +  +M+I E  
Sbjct:    19 PEMAKSKDSFRNYTS-GPLLDRVFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIMEAV 77

Query:    95 ELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGL 154
              +L+D+VDESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGK++ L    G 
Sbjct:    78 GMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKIMAL---WGE 134

Query:   155 PQWAVVGE 162
             PQWAVVG+
Sbjct:   135 PQWAVVGD 142

GO:0004033 "aldo-keto reductase (NADP) activity" evidence=IDA

GO:0005506 "iron ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0008199 "ferric iron binding" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=TAS

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=IDA

GO:0019310 "inositol catabolic process" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0050113 "inositol oxygenase activity" evidence=ISO

GO:0050661 "NADP binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO;IDA;TAS

RGD|628739 Miox "myo-inositol oxygenase" [Rattus norvegicus (taxid:10116)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 58/120 (48%), Positives = 82/120 (68%)

Query:    43 TFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVD 102
             +FR+Y + G   + V   Y++ H +QT DFV + R ++G  +  +M++ E  ++L+D+VD
Sbjct:    27 SFRNYTS-GPLLDRVFTTYKLMHTHQTVDFVMRKRIQFGSFSYKKMTVMEAVDMLDDLVD 85

Query:   103 ESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGE 162
             ESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGK+L L    G PQWAVVG+
Sbjct:    86 ESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKILAL---WGEPQWAVVGD 142

GO:0004033 "aldo-keto reductase (NADP) activity" evidence=ISO;ISS

GO:0005737 "cytoplasm" evidence=ISO;ISS

GO:0008199 "ferric iron binding" evidence=ISO;ISS

GO:0016234 "inclusion body" evidence=ISS

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=IEA;ISO

GO:0016701 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen" evidence=ISS

GO:0019310 "inositol catabolic process" evidence=ISO;ISS

GO:0050113 "inositol oxygenase activity" evidence=ISO;ISS

GO:0050661 "NADP binding" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|E2QTD8 MIOX "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 59/120 (49%), Positives = 82/120 (68%)

Query:    43 TFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVD 102
             +FR+Y+A G   + V   Y++ H  QT DFV+K   ++G  +  +M++ E  ++L+++VD
Sbjct:    27 SFRNYEA-GPLLDRVFATYKLMHTYQTVDFVRKKHIQFGGFSYKKMTVLEAVDMLDELVD 85

Query:   103 ESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGE 162
             ESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGKVL L    G PQWAVVG+
Sbjct:    86 ESDPDVDFPNSYHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLVL---AGEPQWAVVGD 142

GO:0050113 "inositol oxygenase activity" evidence=IEA

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004033 "aldo-keto reductase (NADP) activity" evidence=IEA

GO:0019310 "inositol catabolic process" evidence=IEA

UNIPROTKB|J9P8P0 MIOX "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 59/120 (49%), Positives = 82/120 (68%)

Query:    43 TFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVD 102
             +FR+Y+A G   + V   Y++ H  QT DFV+K   ++G  +  +M++ E  ++L+++VD
Sbjct:    72 SFRNYEA-GPLLDRVFATYKLMHTYQTVDFVRKKHIQFGGFSYKKMTVLEAVDMLDELVD 130

Query:   103 ESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGE 162
             ESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGKVL L    G PQWAVVG+
Sbjct:   131 ESDPDVDFPNSYHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLVL---AGEPQWAVVGD 187

GO:0050113 "inositol oxygenase activity" evidence=IEA

GO:0019310 "inositol catabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

UNIPROTKB|A6PVH2 MIOX "Myo-inositol oxygenase, isoform CRA_c" [Homo sapiens (taxid:9606)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 59/120 (49%), Positives = 81/120 (67%)

Query:    43 TFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVD 102
             +FR+Y + G   + V   Y++ H +QT DFV+    ++G  +  +M++ E  +LL+ +VD
Sbjct:    27 SFRNYTS-GPLLDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVD 85

Query:   103 ESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGE 162
             ESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGKVL L  FG  PQWAVVG+
Sbjct:    86 ESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL--FGE-PQWAVVGD 142

GO:0005506 "iron ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0019310 "inositol catabolic process" evidence=IEA

GO:0050113 "inositol oxygenase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8L799	MIOX1_ARATH	1, ., 1, 3, ., 9, 9, ., 1	0.7314	0.9016	0.5305	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.13.99	0.921
3rd Layer	1.13.99.1	0.914

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	183
pfam05153	255	pfam05153, DUF706, Family of unknown function (DUF	1e-68

>gnl|CDD|191210 pfam05153, DUF706, Family of unknown function (DUF706)

 Score =  209 bits (533), Expect = 1e-68
 Identities = 76/121 (62%), Positives = 87/121 (71%), Gaps = 5/121 (4%)

Query: 48  DAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPD 107
             E    + V  FYR  H  QT DFVKK R E+ K  R +M+IWE  ELLN +VDESDPD
Sbjct: 1   YEEAPLCDRVREFYREQHTKQTVDFVKKARAEFLKFTRAKMTIWEALELLNTLVDESDPD 60

Query: 108 LDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSF 167
            D PQI+HLLQTAEAIR+D+PD DW+HLTGLIHDLGKVL    FGG PQWAVVG+   +F
Sbjct: 61  TDLPQIQHLLQTAEAIRRDHPDPDWMHLTGLIHDLGKVLAF--FGGEPQWAVVGD---TF 115

Query: 168 P 168
           P
Sbjct: 116 P 116

Family of uncharacterized eukaryotic function. Some members have a described putative function, but a common theme is not evident. Length = 255

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	183
KOG1573	204	consensus Aldehyde reductase [General function pre	100.0
PF05153	253	DUF706: Family of unknown function (DUF706) ; Inte	100.0
TIGR03276	179	Phn-HD phosphonate degradation operons associated	97.8
COG4341	186	Predicted HD phosphohydrolase [General function pr	96.01
TIGR00488	158	putative HD superfamily hydrolase of NAD metabolis	95.65
smart00471	124	HDc Metal dependent phosphohydrolases with conserv	94.4
TIGR01596	177	cas3_HD CRISPR-associated endonuclease Cas3-HD. CR	93.36
TIGR00277	80	HDIG uncharacterized domain HDIG. This domain is f	93.12
PF01966	122	HD: HD domain; InterPro: IPR006674 This domain is	92.98
cd00077	145	HDc Metal dependent phosphohydrolases with conserv	92.01
TIGR03319	514	YmdA_YtgF conserved hypothetical protein YmdA/YtgF	90.86
PRK00106	535	hypothetical protein; Provisional	90.53
COG2316	212	Predicted hydrolase (HD superfamily) [General func	89.91
PF08668	196	HDOD: HDOD domain; InterPro: IPR013976 This domain	89.25
PRK07152	342	nadD putative nicotinate-nucleotide adenylyltransf	85.65
PRK12703	339	tRNA 2'-O-methylase; Reviewed	85.13
TIGR00295	164	conserved hypothetical protein TIGR00295. This set	83.19
PRK12705	508	hypothetical protein; Provisional	82.27
TIGR02621	844	cas3_GSU0051 CRISPR-associated helicase Cas3, Anae	80.84

>KOG1573 consensus Aldehyde reductase [General function prediction only]

Probab=100.00  E-value=7.4e-68  Score=440.52  Aligned_cols=149  Identities=64%  Similarity=1.071  Sum_probs=139.6

Q ss_pred             ecCCCCCCCCccccccCCCCcc-chhhhHHHHHHHHHhhhhhhHHHHHHHHHHhcCCCCCcCCHHHHHHHhhhccCCCCC
Q 030081           28 LDGGFLVPQTNSFGHTFRDYDA-EGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDP  106 (183)
Q Consensus        28 ~dggf~~p~~~~~~~~FR~Y~~-~~~r~~~V~~fYr~~H~~QTvdFV~~~~~~~~~~~~~~MtI~EA~e~Ln~lVDeSDP  106 (183)
                      .|--|+.|++++++.+||+|++ ++++++||+.|||.||+|||||||++||++|+||++.+||||||||+||++||||||
T Consensus        12 v~e~~~~pe~~a~g~~fRdY~dt~~p~q~rV~~~Y~~qH~~QTvDFVk~mr~~~gkf~~~kM~i~ec~ell~~~vDESDP   91 (204)
T KOG1573|consen   12 VDEPFVAPEVNADGRQFRDYDDTEDPLQKRVRTTYRTQHTNQTVDFVKKMRAEYGKFDKMKMTIWECCELLNEVVDESDP   91 (204)
T ss_pred             ccCCCCChhhhcchhhhccccccccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcccchhheeHHHHHHHHHhhhcccCC
Confidence            3445999999999999999964 688999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcchHHHHHHHHHHHHhcCCCCCchhhhhhhhcccccccccCCCCCCCeeEecccCcC---------CCC---CCCCC
Q 030081          107 DLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFS---------FPP---PPNPN  174 (183)
Q Consensus       107 D~dlpqi~H~lQTAEaIR~d~p~pDW~qLtGLIHDLGKvl~l~~fg~epQWaVVGDTF~~---------~~~---~~np~  174 (183)
                      |+|+|||+|||||||+||++||++||||||||||||||||.   |||+||||||||||+-         |-|   .-|||
T Consensus        92 DlDepni~Ha~QtAE~iR~~~Pd~dWlHLtaLiHDLGKvl~---f~GepQWAVvGDTfpVGC~~~~s~V~~d~~F~~NpD  168 (204)
T KOG1573|consen   92 DLDEPNIQHALQTAEAIRKDYPDEDWLHLTALIHDLGKVLA---FGGEPQWAVVGDTFPVGCAFDASNVHHDKYFDGNPD  168 (204)
T ss_pred             CCchHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHH---hcCCcceeeecCcccccccccccceechhhccCCCC
Confidence            99999999999999999999999999999999999999995   5889999999999964         444   67999


Q ss_pred             CCccc
Q 030081          175 FLSKI  179 (183)
Q Consensus       175 ~~~~~  179 (183)
                      +.||.
T Consensus       169 ~~np~  173 (204)
T KOG1573|consen  169 INNPK  173 (204)
T ss_pred             CCCcc
Confidence            99986

>PF05153 DUF706: Family of unknown function (DUF706) ; InterPro: IPR007828 Inositol oxygenase (1

Probab=100.00  E-value=1.3e-63  Score=429.96  Aligned_cols=125  Identities=62%  Similarity=1.012  Sum_probs=99.9

Q ss_pred             hhHHHHHHHHHhhhhhhHHHHHHHHHHhcCCCCCcCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhcCCCCCc
Q 030081           53 RQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDW  132 (183)
Q Consensus        53 r~~~V~~fYr~~H~~QTvdFV~~~~~~~~~~~~~~MtI~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~d~p~pDW  132 (183)
                      +++||++|||+||++||||||++||++|++|+|++|||||||++||+||||||||+|+|||+||||||||||++||+|||
T Consensus         4 ~~~~V~~~Y~~~h~~QTv~fv~~~~~~~~~~~~~~Mti~eA~~~L~~LvDeSDPD~d~~~i~H~lQTAEaiR~d~~~~dW   83 (253)
T PF05153_consen    4 ACDRVKEFYRLQHTNQTVDFVKKMRAKYLKFDHAEMTIWEALELLNTLVDESDPDTDLPQIQHALQTAEAIRRDHPDPDW   83 (253)
T ss_dssp             -HHHHHHHHHHHHCC--HHHHHHHHHHHTT--SEEE-HHHHHHHGGG---TT-TT--S-HHHHHHHHHHHHHHHSTT-HH
T ss_pred             HhHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCcceeeHHHHHHHHHHhccCccCCCchhHHHHHHHHHHHHHHhCCCcch
Confidence            56789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhcccccccccCCCCCCCeeEecccCcC---------CCC--CCCCCCCccc
Q 030081          133 LHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFS---------FPP--PPNPNFLSKI  179 (183)
Q Consensus       133 ~qLtGLIHDLGKvl~l~~fg~epQWaVVGDTF~~---------~~~--~~np~~~~~~  179 (183)
                      ||||||||||||||++  ||++|||+|||||||=         ||.  +.|||+.+|+
T Consensus        84 ~~LtGLiHDLGKvl~~--~~~e~QW~vvGDTfpVGC~f~~~iv~~e~f~~NpD~~~~~  139 (253)
T PF05153_consen   84 MQLTGLIHDLGKVLAL--FGGEPQWAVVGDTFPVGCAFSESIVFPEFFKDNPDSKNPR  139 (253)
T ss_dssp             HHHHHHHTTGGGHHHH--C-T--GGGTSS---BSSS---TTSTTCCC-TT-GGGCSTT
T ss_pred             hhheehhccchhhhhh--hcCCCCceeecCceeEecccCccccChhhHhhCCCCCCcc
Confidence            9999999999999999  8899999999999954         666  8999999996

13.99.1 from EC) is involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. It may be also involved in plant ascorbate biosynthesis [, ].; GO: 0005506 iron ion binding, 0050113 inositol oxygenase activity, 0019310 inositol catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 2HUO_A 3BXD_A 2IBN_A.

>TIGR03276 Phn-HD phosphonate degradation operons associated HDIG domain protein

Probab=97.80  E-value=2.7e-05  Score=65.13  Aligned_cols=57  Identities=25%  Similarity=0.313  Sum_probs=42.9

Q ss_pred             HHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhcCCCCCchhhhhhhhccccccc
Q 030081           90 IWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLN  147 (183)
Q Consensus        90 I~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~d~p~pDW~qLtGLIHDLGKvl~  147 (183)
                      |.+-..++.......----.+||++|+||||...++++- .+=+.+++|+||+|.++.
T Consensus         4 ~~~i~~l~~~~g~~~y~Ge~Vs~leH~LQ~A~lA~~~Ga-d~elvvAALLHDIGhll~   60 (179)
T TIGR03276         4 LDEIFALFDEHGARQYGGEAVSQLEHALQCAQLAEAAGA-DDELIVAAFLHDIGHLLA   60 (179)
T ss_pred             HHHHHHHHHhcCccccCCCCCcHHHHHHHHHHHHHHcCC-CHHHHHHHHHHhcchhhh
Confidence            445555555555443223459999999999999999984 555699999999999984

This small clade of proteins are found adjacent to other genes implicated in the catabolism of phosphonates. They are members of the TIGR00277 domain family and contain a series of five invariant histidines (the domain in general has only four).

>COG4341 Predicted HD phosphohydrolase [General function prediction only]

Probab=96.01  E-value=0.0085  Score=51.00  Aligned_cols=59  Identities=29%  Similarity=0.381  Sum_probs=43.6

Q ss_pred             HHHhhhccCCCCCCCCcchHHHHHHHHHHHHhcCCCCCchhhhhhhhcccccccccCCCCCC
Q 030081           94 CELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLP  155 (183)
Q Consensus        94 ~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~d~p~pDW~qLtGLIHDLGKvl~l~~fg~ep  155 (183)
                      ..+....-||+=----++|++|+||+|-..-++| -++=+.-+.|+||+|.+..  .||..|
T Consensus        13 ~~~F~~~g~e~y~ge~VTq~eHaLQ~AtlAerdG-a~~~lVaaALLHDiGhl~~--~~g~~p   71 (186)
T COG4341          13 AYLFLRHGDEGYSGEPVTQLEHALQCATLAERDG-ADTALVAAALLHDIGHLYA--DYGHTP   71 (186)
T ss_pred             HHHHHHccccccccCcchhhhhHHHHhHHHHhcC-CcHHHHHHHHHHhHHHHhh--hcCCCc
Confidence            3333344566555556899999999999999998 4555567899999999984  366433

>TIGR00488 putative HD superfamily hydrolase of NAD metabolism

Probab=95.65  E-value=0.0054  Score=48.36  Aligned_cols=36  Identities=25%  Similarity=0.397  Sum_probs=28.1

Q ss_pred             chHHHHHHHHHHHH----hcCCCCCchhhhhhhhcccccc
Q 030081          111 PQIEHLLQTAEAIR----KDYPDEDWLHLTGLIHDLGKVL  146 (183)
Q Consensus       111 pqi~H~lQTAEaIR----~d~p~pDW~qLtGLIHDLGKvl  146 (183)
                      .-..|.+.+|...|    +-++++++..++||+||+||.+
T Consensus         8 ~r~~Hsl~Va~~a~~lA~~~~~d~e~a~~AGLLHDIGk~~   47 (158)
T TIGR00488         8 HRYQHCLGVGQTAKQLAEANKLDSKKAEIAGAYHDLAKFL   47 (158)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHhccC
Confidence            46789998776543    3346789999999999999964

The function of this protein family is unknown. Members of this family of uncharacterized proteins from the Mycoplasmas are longer at the amino end, fused to a region of nicotinamide nucleotide adenylyltransferase, an NAD salvage biosynthesis enzyme. Members are putative metal-dependent phosphohydrolases for NAD metabolism.

>smart00471 HDc Metal dependent phosphohydrolases with conserved 'HD' motif

Probab=94.40  E-value=0.014  Score=39.82  Aligned_cols=39  Identities=31%  Similarity=0.303  Sum_probs=28.3

Q ss_pred             cchHHHHHHHHHHHHhcC---C--CCCchhhhhhhhcccccccc
Q 030081          110 EPQIEHLLQTAEAIRKDY---P--DEDWLHLTGLIHDLGKVLNL  148 (183)
Q Consensus       110 lpqi~H~lQTAEaIR~d~---p--~pDW~qLtGLIHDLGKvl~l  148 (183)
                      .+..+|.+++|...+.-.   +  +.+.+-++||+||+||....
T Consensus         3 ~~~~~H~~~v~~~~~~l~~~~~~~~~~~~~~a~LlHDig~~~~~   46 (124)
T smart00471        3 YHVFEHSLRVAQLAAALAEELGLLDIELLLLAALLHDIGKPGTP   46 (124)
T ss_pred             chHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHcccCccCC
Confidence            356778888777665332   1  35678899999999998853

Includes eukaryotic cyclic nucleotide phosphodiesterases (PDEc). This profile/HMM does not detect HD homologues in bacterial glycine aminoacyl-tRNA synthetases (beta subunit).

>TIGR01596 cas3_HD CRISPR-associated endonuclease Cas3-HD

Probab=93.36  E-value=0.028  Score=43.21  Aligned_cols=34  Identities=38%  Similarity=0.493  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHHh----------cC--CCCCchhhhhhhhcccccc
Q 030081          113 IEHLLQTAEAIRK----------DY--PDEDWLHLTGLIHDLGKVL  146 (183)
Q Consensus       113 i~H~lQTAEaIR~----------d~--p~pDW~qLtGLIHDLGKvl  146 (183)
                      .+|++.||+..+.          ..  ..++++-++|++||+||+-
T Consensus         2 ~~H~~~v~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~lHDiGK~~   47 (177)
T TIGR01596         2 NEHLLDVAAVAEKLKNLDIVIADLIGKLLRELLDLLALLHDIGKIN   47 (177)
T ss_pred             HHHHHHHHHHHHHHhcccHHHHHHHhhHHHHHHHHHHHHccCccCC
Confidence            4688887776653          11  1368999999999999975

CRISPR/Cas systems are widespread, mobile systems for host defense against invasive elements such as phage. In these systems, Cas3 designates one of the core proteins shared widely by multiple types of CRISPR/Cas system. This model represents an HD-like endonuclease that occurs either separately or as the N-terminal region of Cas3, the helicase-containing CRISPR-associated protein.

>TIGR00277 HDIG uncharacterized domain HDIG

Probab=93.12  E-value=0.065  Score=35.55  Aligned_cols=35  Identities=26%  Similarity=0.382  Sum_probs=22.7

Q ss_pred             HHHHHHHHHHHH----hcCCCCCchhhhhhhhccccccc
Q 030081          113 IEHLLQTAEAIR----KDYPDEDWLHLTGLIHDLGKVLN  147 (183)
Q Consensus       113 i~H~lQTAEaIR----~d~p~pDW~qLtGLIHDLGKvl~  147 (183)
                      ..|.+.+|...+    +-+.+++.+-++||+||+||+..
T Consensus         6 ~~H~~~v~~~a~~la~~~~~~~~~l~~AalLHDiG~~~~   44 (80)
T TIGR00277         6 LQHSLEVAKLAEALARELGLDVELARRGALLHDIGKPIT   44 (80)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHccCCccc
Confidence            445544444333    22345567889999999999873

This domain is found in a few known nucleotidyltransferes and in a large number of uncharacterized proteins. It contains four widely separated His residues, the second of which is part of an invariant dipeptide His-Asp in a region matched approximately by the motif HDIG.

>PF01966 HD: HD domain; InterPro: IPR006674 This domain is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity []

Probab=92.98  E-value=0.027  Score=39.37  Aligned_cols=35  Identities=34%  Similarity=0.631  Sum_probs=25.0

Q ss_pred             HHHHHHHHHHHHh---cCC---CCCchhhhhhhhccccccc
Q 030081          113 IEHLLQTAEAIRK---DYP---DEDWLHLTGLIHDLGKVLN  147 (183)
Q Consensus       113 i~H~lQTAEaIR~---d~p---~pDW~qLtGLIHDLGKvl~  147 (183)
                      ++|.+.+|+..++   ..+   +.+++.++||+||+||...
T Consensus         2 ~~Hs~~V~~~a~~l~~~~~~~~~~~~l~~aaLlHDiGk~~~   42 (122)
T PF01966_consen    2 FEHSLRVAELAERLADRLGLEEDRELLRIAALLHDIGKIPT   42 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTHHST
T ss_pred             hhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhcCCCCC
Confidence            4677766655443   222   5678999999999999884

These enzymes appear to be involved in the nucleic acid metabolism, signal transduction and possibly other functions in bacteria, archaea and eukaryotes. The fact that all the highly conserved residues in the HD superfamily are histidines or aspartates suggests that coordination of divalent cations is essential for the activity of these proteins [].; GO: 0008081 phosphoric diester hydrolase activity, 0046872 metal ion binding; PDB: 2CQZ_A 2Q14_C 3CCG_A 2PAU_A 2PAQ_B 2PAR_B 3BG2_A 3NQW_A 2QGS_B 2DQB_D ....

>cd00077 HDc Metal dependent phosphohydrolases with conserved 'HD' motif

Probab=92.01  E-value=0.061  Score=37.11  Aligned_cols=35  Identities=37%  Similarity=0.554  Sum_probs=23.4

Q ss_pred             hHHHHHHHHHHHHhc---C----CCCCchhhhhhhhcccccc
Q 030081          112 QIEHLLQTAEAIRKD---Y----PDEDWLHLTGLIHDLGKVL  146 (183)
Q Consensus       112 qi~H~lQTAEaIR~d---~----p~pDW~qLtGLIHDLGKvl  146 (183)
                      ...|.++++..+..-   .    .+++.+-++||+||+||..
T Consensus         3 ~~~Hs~~v~~~~~~~~~~~~~~~~~~~~l~~aaLlHDig~~~   44 (145)
T cd00077           3 RFEHSLRVAQLARRLAEELGLSEEDIELLRLAALLHDIGKPG   44 (145)
T ss_pred             hHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHhcCCcc
Confidence            456666555444322   1    2357788999999999975

>TIGR03319 YmdA_YtgF conserved hypothetical protein YmdA/YtgF

Probab=90.86  E-value=0.25  Score=46.99  Aligned_cols=55  Identities=22%  Similarity=0.283  Sum_probs=37.3

Q ss_pred             HHHHHHhhhccCCCCCCCCcchHHHHHHHHHHH----HhcCCCCCchhhhhhhhccccccc
Q 030081           91 WECCELLNDVVDESDPDLDEPQIEHLLQTAEAI----RKDYPDEDWLHLTGLIHDLGKVLN  147 (183)
Q Consensus        91 ~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaI----R~d~p~pDW~qLtGLIHDLGKvl~  147 (183)
                      .+++.+|..|---+....+  ...|.+.+|...    +.-+.+++...++||+||+||++.
T Consensus       311 ~~~~~~l~~l~~r~~~~~~--~l~Hs~~VA~lA~~LA~~lgld~~~a~~AGLLHDIGK~~~  369 (514)
T TIGR03319       311 PELIKLLGRLKFRTSYGQN--VLQHSIEVAHLAGIMAAELGEDVKLAKRAGLLHDIGKAVD  369 (514)
T ss_pred             HHHHHHHHHhhccccCCcc--HHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHhcCcccc
Confidence            4667777765433222211  578988887653    344567888999999999999864

>PRK00106 hypothetical protein; Provisional

Probab=90.53  E-value=0.26  Score=47.55  Aligned_cols=55  Identities=11%  Similarity=0.196  Sum_probs=41.4

Q ss_pred             HHHHHHhhhccCCCCCCCCcchHHHHHHHHHHH----HhcCCCCCchhhhhhhhccccccc
Q 030081           91 WECCELLNDVVDESDPDLDEPQIEHLLQTAEAI----RKDYPDEDWLHLTGLIHDLGKVLN  147 (183)
Q Consensus        91 ~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaI----R~d~p~pDW~qLtGLIHDLGKvl~  147 (183)
                      .|++.+|-.|-.-+.-+-  ....|.+.+|...    +.-+.++++.-++||+||+||++-
T Consensus       332 ~e~~~~lg~l~~r~sy~q--nl~~HSv~VA~lA~~lA~~lgld~e~a~~AGLLHDIGK~v~  390 (535)
T PRK00106        332 PDLIKIMGRLQFRTSYGQ--NVLRHSVEVGKLAGILAGELGENVALARRAGFLHDMGKAID  390 (535)
T ss_pred             HHHHHHHHHHhhhccCCC--cHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhccCccC
Confidence            478888887765543332  3789999998865    444567799999999999999964

>COG2316 Predicted hydrolase (HD superfamily) [General function prediction only]

Probab=89.91  E-value=0.29  Score=42.30  Aligned_cols=55  Identities=31%  Similarity=0.349  Sum_probs=42.3

Q ss_pred             CcCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhc----CCCCCchhhhhhhhcccccc
Q 030081           86 VEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKD----YPDEDWLHLTGLIHDLGKVL  146 (183)
Q Consensus        86 ~~MtI~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~d----~p~pDW~qLtGLIHDLGKvl  146 (183)
                      +.||-+||+++|.+.|-.      .+.+.|++.++..+|.-    +-|..=..++||+||+--=+
T Consensus        28 ~~i~r~ea~eLlk~hv~~------e~L~kHcla~eavMr~lARe~gEDEEkw~~~GlLHD~DYe~   86 (212)
T COG2316          28 AAINRDEAYELLKEHVPS------ESLQKHCLAVEAVMRWLAREWGEDEEKWAVTGLLHDFDYEL   86 (212)
T ss_pred             HhhcchHHHHHHHHhCCc------HHHHHHHHHHHHHHHHHHHHhCccHHHHHHHhhhhhccHHh
Confidence            458889999999999843      56899999999988743    33444447899999986544

>PF08668 HDOD: HDOD domain; InterPro: IPR013976 This domain is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity

Probab=89.25  E-value=0.61  Score=36.85  Aligned_cols=69  Identities=32%  Similarity=0.325  Sum_probs=44.3

Q ss_pred             hcCCCCCcCCHHHHHHHhh--------------hccCCCC-CCCC-cchHHHHHHHHHHHHh----cCC-CCCchhhhhh
Q 030081           80 YGKLNRVEMSIWECCELLN--------------DVVDESD-PDLD-EPQIEHLLQTAEAIRK----DYP-DEDWLHLTGL  138 (183)
Q Consensus        80 ~~~~~~~~MtI~EA~e~Ln--------------~lVDeSD-PD~d-lpqi~H~lQTAEaIR~----d~p-~pDW~qLtGL  138 (183)
                      |.++.+.--||.+|+-.|=              .....+. .... .....|.+.+|..+++    ... +++-.-++||
T Consensus        47 ~~~~~~~i~sl~~Ai~~LG~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~a~~a~~la~~~~~~~~~~a~~~gL  126 (196)
T PF08668_consen   47 YFGLRRPISSLEQAISRLGLDRIRNLALALSLRSLFPSSPPYQFNLERFWRHSLAAAAIARRLARELGFDDPDEAYLAGL  126 (196)
T ss_dssp             TTTSTST--SHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCTTSCHHHHHHHHHHHHHHHHHHHHHCTCCHHHHHHHHHH
T ss_pred             hcCCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHHHccccchhhhhHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence            3346666779999987764              1222222 1222 4467888888877753    222 3488999999


Q ss_pred             hhcccccccc
Q 030081          139 IHDLGKVLNL  148 (183)
Q Consensus       139 IHDLGKvl~l  148 (183)
                      +||+|+++..
T Consensus       127 L~~iG~l~l~  136 (196)
T PF08668_consen  127 LHDIGKLLLL  136 (196)
T ss_dssp             HTTHHHHHHH
T ss_pred             HHHHhHHHHH
Confidence            9999999876

These members appear to be involved in the nucleic acid metabolism and signal transduction or possibly other functions and are restricted to bacteria, primarily the proteobacteria. The fact that all the highly conserved residues in the HD superfamily are histidines or aspartates suggests that coordination of divalent cations is essential for the activity of these proteins [].; PDB: 1VQR_D 3LJX_A 3P3Q_B 3MEM_A 3M1T_A 3HC1_A 3I7A_A.

>PRK07152 nadD putative nicotinate-nucleotide adenylyltransferase; Validated

Probab=85.65  E-value=0.43  Score=42.22  Aligned_cols=35  Identities=26%  Similarity=0.330  Sum_probs=25.9

Q ss_pred             hHHHHHHHHHHHHh----cCCCCCchhhhhhhhcccccc
Q 030081          112 QIEHLLQTAEAIRK----DYPDEDWLHLTGLIHDLGKVL  146 (183)
Q Consensus       112 qi~H~lQTAEaIR~----d~p~pDW~qLtGLIHDLGKvl  146 (183)
                      -..|.+.+|...+.    -+.+++=..++||+||+||+.
T Consensus       197 ~~~HSl~VA~~A~~LA~~~g~d~~~a~~AGLLHDIGK~~  235 (342)
T PRK07152        197 RYKHCLRVAQLAAELAKKNNLDPKKAYYAGLYHDITKEW  235 (342)
T ss_pred             HHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHhhccC
Confidence            66888888765432    233557777899999999975

>PRK12703 tRNA 2'-O-methylase; Reviewed

Probab=85.13  E-value=1.2  Score=40.85  Aligned_cols=60  Identities=22%  Similarity=0.289  Sum_probs=40.0

Q ss_pred             CCCCCcCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHH---HHhc-CCCCCchhhhhhhhccccccc
Q 030081           82 KLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEA---IRKD-YPDEDWLHLTGLIHDLGKVLN  147 (183)
Q Consensus        82 ~~~~~~MtI~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEa---IR~d-~p~pDW~qLtGLIHDLGKvl~  147 (183)
                      |.....++..||+++|..+--+  +    ..+.|.++.|..   |-+. ..+.+=+.++||+||+||...
T Consensus       164 k~v~~ip~~ee~l~Ll~k~~~~--e----~l~~Hs~rVa~lA~~LA~~~~~D~~ll~aAALLHDIGK~k~  227 (339)
T PRK12703        164 KLVKIIPDEDQCLDLLKKYGAS--D----LLIRHVKTVYKLAMRIADCINADRRLVAAGALLHDIGRTKT  227 (339)
T ss_pred             ccccCCCCHHHHHHHHHHcCCC--h----HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcccccc
Confidence            3444568999999999988321  1    168888765543   3232 234555667899999999764

>TIGR00295 conserved hypothetical protein TIGR00295

Probab=83.19  E-value=0.91  Score=36.48  Aligned_cols=36  Identities=25%  Similarity=0.397  Sum_probs=24.8

Q ss_pred             hHHHHHHHHHH---HHhcC------CCCCchhhhhhhhccccccc
Q 030081          112 QIEHLLQTAEA---IRKDY------PDEDWLHLTGLIHDLGKVLN  147 (183)
Q Consensus       112 qi~H~lQTAEa---IR~d~------p~pDW~qLtGLIHDLGKvl~  147 (183)
                      .+.|.+..|..   |-+..      .+.+=+-++||+||+||+..
T Consensus        14 ~~~Hs~~Va~~A~~ia~~~~~~~~~~d~~~l~~aaLLHDIGK~~~   58 (164)
T TIGR00295        14 VRRHCLAVARVAMELAENIRKKGHEVDMDLVLKGALLHDIGRART   58 (164)
T ss_pred             HHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHhcCCcccC
Confidence            67787776654   22221      35567788999999999864

This set of orthologs is narrowly defined, comprising proteins found in three Archaea but not in Pyrococcus horikoshii. The closest homologs are other archaeal proteins that appear to be represent distinct orthologous clusters.

>PRK12705 hypothetical protein; Provisional

Probab=82.27  E-value=1.3  Score=42.52  Aligned_cols=35  Identities=29%  Similarity=0.397  Sum_probs=27.5

Q ss_pred             hHHHHHHHHHHHH----hcCCCCCchhhhhhhhcccccc
Q 030081          112 QIEHLLQTAEAIR----KDYPDEDWLHLTGLIHDLGKVL  146 (183)
Q Consensus       112 qi~H~lQTAEaIR----~d~p~pDW~qLtGLIHDLGKvl  146 (183)
                      .+.|.+.+|...+    +-+-+++....+||+||+||..
T Consensus       324 vl~HSl~VA~lA~~LA~~lGld~d~a~~AGLLHDIGK~i  362 (508)
T PRK12705        324 VLSHSLEVAHLAGIIAAEIGLDPALAKRAGLLHDIGKSI  362 (508)
T ss_pred             HHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHcCCcc
Confidence            5889999888664    3344567778899999999986

>TIGR02621 cas3_GSU0051 CRISPR-associated helicase Cas3, Anaes-subtype

Probab=80.84  E-value=1.1  Score=45.43  Aligned_cols=37  Identities=24%  Similarity=0.226  Sum_probs=29.1

Q ss_pred             cchHHHHHHHHHHHHhc---CCCCCc---hhhhhhhhcccccc
Q 030081          110 EPQIEHLLQTAEAIRKD---YPDEDW---LHLTGLIHDLGKVL  146 (183)
Q Consensus       110 lpqi~H~lQTAEaIR~d---~p~pDW---~qLtGLIHDLGKvl  146 (183)
                      -+.-+|+..+|+..+.-   ...++|   ..++|++|||||.-
T Consensus       674 q~L~eHl~~va~lA~~fa~~~gl~~~~~~~~laGllHDlGK~~  716 (844)
T TIGR02621       674 VALSDHLDNVFEVAKNFVAKLGLGDLDKAVRQAARLHDLGKQR  716 (844)
T ss_pred             EEHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccccCC
Confidence            56789999998877643   335677   57999999999976

This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	183
2huo_A	289	Crystal Structure Of Mouse Myo-Inositol Oxygenase I		2e-27
2ibn_A	246	Crystal Structure Of Human Myo-Inositol Oxygenase (		2e-21
2ibn_B	240	Crystal Structure Of Human Myo-Inositol Oxygenase (		4e-20

>pdb|2HUO|A Chain A, Crystal Structure Of Mouse Myo-Inositol Oxygenase In Complex With Substrate Length = 289

Iteration: 1
 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/128 (46%), Positives = 82/128 (64%), Gaps = 4/128 (3%)
Query: 35  PQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECC 94
           P+      +FR+Y   G   + V   Y++ H +QT DFV + R +YG  +  +M+I E  
Sbjct: 23  PEMAKSKDSFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIMEAV 81
Query: 95  ELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGL 154
            +L+D+VDESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGK++ L    G 
Sbjct: 82  GMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKIMAL---WGE 138
Query: 155 PQWAVVGE 162
           PQWAVVG+
Sbjct: 139 PQWAVVGD 146

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	183
2huo_A	289	Inositol oxygenase; protein-substrate complex, HD	8e-55
2ibn_A	250	Inositol oxygenase; reductase, DIIRON, structural	3e-50

>2huo_A Inositol oxygenase; protein-substrate complex, HD domain fold, oxidoreductase; HET: INS; 2.00A {Mus musculus} SCOP: a.211.1.4 PDB: 3bxd_A* Length = 289

 Score =  174 bits (442), Expect = 8e-55
 Identities = 61/149 (40%), Positives = 87/149 (58%), Gaps = 4/149 (2%)

Query: 14  VQEKKVPIDEKELSLDGGFLVPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFV 73
               KV +      +    + P+      +FR+Y   G   + V   Y++ H +QT DFV
Sbjct: 2   AMGMKVDVGPDPSLVYRPDVDPEMAKSKDSFRNYT-SGPLLDRVFTTYKLMHTHQTVDFV 60

Query: 74  KKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWL 133
            + R +YG  +  +M+I E   +L+D+VDESDPD+D P   H  QTAE IRK +PD+DW 
Sbjct: 61  SRKRIQYGSFSYKKMTIMEAVGMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWF 120

Query: 134 HLTGLIHDLGKVLNLPSFGGLPQWAVVGE 162
           HL GL+HDLGK++   +  G PQWAVVG+
Sbjct: 121 HLVGLLHDLGKIM---ALWGEPQWAVVGD 146

>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4 Length = 250

 Score =  161 bits (408), Expect = 3e-50
 Identities = 54/119 (45%), Positives = 74/119 (62%), Gaps = 3/119 (2%)

Query: 54  QEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQI 113
            + V   Y++ H +QT DFV+    ++G  +  +M++ E  +LL+ +VDESDPD+D P  
Sbjct: 2   MDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNS 61

Query: 114 EHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFPPPPN 172
            H  QTAE IRK +PD+DW HL GL+HDLGKVL   +  G PQWAVVG+       P  
Sbjct: 62  FHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVL---ALFGEPQWAVVGDTFPVGCRPQA 117

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	183
2huo_A	289	Inositol oxygenase; protein-substrate complex, HD	100.0
2ibn_A	250	Inositol oxygenase; reductase, DIIRON, structural	100.0
2o08_A	188	BH1327 protein; putative HD superfamily hydrolase,	95.86
2ogi_A	196	Hypothetical protein SAG1661; structural genomics,	95.52
3ccg_A	190	HD superfamily hydrolase; NP_347894.1, HD domain,	95.48
3i7a_A	281	Putative metal-dependent phosphohydrolase; YP_9268	92.37
3hc1_A	305	Uncharacterized HDOD domain protein; HDOD domain p	91.95
3b57_A	209	LIN1889 protein; Q92AN1, X-RAY, NESG, structural g	90.94
2qgs_A	225	Protein Se1688; alpha-helical protein, structural	90.16
3ljx_A	288	MMOQ response regulator; structural genomics, PSI-	89.89
3dto_A	223	BH2835 protein; all alpha-helical protein, structu	89.73
3djb_A	223	Hydrolase, HD family; all alpha-helical protein.,	89.64
2pjq_A	231	Uncharacterized protein LP_2664; LPR71, NESG, stru	89.03
3m1t_A	275	Putative phosphohydrolase; structural genomics, jo	88.88
1vqr_A	297	Hypothetical protein CJ0248; HD-domain/pdease-like	86.79
3sk9_A	265	Putative uncharacterized protein TTHB187; crispr,	86.65
2pq7_A	220	Predicted HD superfamily hydrolase; 104161995, HD	86.58
3kq5_A	393	Hypothetical cytosolic protein; structural genomic	81.6
3tm8_A	328	BD1817, uncharacterized protein; HD-GYP, phosphodi	80.34

>2huo_A Inositol oxygenase; protein-substrate complex, HD domain fold, oxidoreductase; HET: INS; 2.00A {Mus musculus} SCOP: a.211.1.4 PDB: 3bxd_A*

Probab=100.00  E-value=1.3e-67  Score=459.98  Aligned_cols=149  Identities=43%  Similarity=0.725  Sum_probs=124.8

Q ss_pred             eecCC-CCCCCCc----cccccCCCCccchhhhHHHHHHHHHhhhhhhHHHHHHHHHHhcCCCCCcCCHHHHHHHhhhcc
Q 030081           27 SLDGG-FLVPQTN----SFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVV  101 (183)
Q Consensus        27 v~dgg-f~~p~~~----~~~~~FR~Y~~~~~r~~~V~~fYr~~H~~QTvdFV~~~~~~~~~~~~~~MtI~EA~e~Ln~lV  101 (183)
                      .+|++ |.+|+.+    +++++||||++ +.+++||++|||+||++|||+||++||++|++|+|++|||||||++||+||
T Consensus        10 ~~d~~~~~~p~~~~~~~k~~~~FR~Y~~-~~~~~~V~~fYr~~H~~QTvdfv~~~~~~~~~~~~~~MtIweA~e~Ln~Lv   88 (289)
T 2huo_A           10 GPDPSLVYRPDVDPEMAKSKDSFRNYTS-GPLLDRVFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIMEAVGMLDDLV   88 (289)
T ss_dssp             ----------------------CCCSSS-CSSHHHHHHHHHHHHHHCCHHHHHHHHHHHTTCCSCEECHHHHHHHGGGCC
T ss_pred             cCCccceeccCccccccccHHHhhCccc-chhHHHHHHHHHHHhhhhHHHHHHHHHHHHhccCCCCCcHHHHHHHHHHhc
Confidence            37888 6888877    77889999997 457899999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHhcCCCCCchhhhhhhhcccccccccCCCCCCCeeEecccCcC---------CCC---
Q 030081          102 DESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFS---------FPP---  169 (183)
Q Consensus       102 DeSDPD~dlpqi~H~lQTAEaIR~d~p~pDW~qLtGLIHDLGKvl~l~~fg~epQWaVVGDTF~~---------~~~---  169 (183)
                      ||||||+|+|||+||||||||||++||++||||||||||||||||++   +++|||+|||||||=         ||.   
T Consensus        89 DeSDPD~dl~qi~H~lQTAEaiR~d~pp~dW~qLtGLiHDLGKvl~~---~~epQW~vvGDTfpVGC~f~~~iv~~e~~F  165 (289)
T 2huo_A           89 DESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKIMAL---WGEPQWAVVGDTFPVGCRPQASVVFCDSTF  165 (289)
T ss_dssp             CSSCTTCCSCHHHHHHHHHHHHHHHCTTCHHHHHHHHHTTGGGGGGG---GTCCGGGTSSCCCBSSSCCCTTSTTTTTSC
T ss_pred             CCcCCccchhHHHHHHHHHHHHHHhCCCcchheeeeecccchhhhhh---cCCCceeeecCcceeccccccccccchhhc
Confidence            99999999999999999999999999877999999999999999987   469999999999953         666   


Q ss_pred             CCCCCCCccc
Q 030081          170 PPNPNFLSKI  179 (183)
Q Consensus       170 ~~np~~~~~~  179 (183)
                      +.|||+.||+
T Consensus       166 ~~NpD~~~p~  175 (289)
T 2huo_A          166 QDNPDLQDPR  175 (289)
T ss_dssp             TTCGGGGSTT
T ss_pred             cCCCCCCCcc
Confidence            8999999995

>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4

Probab=100.00  E-value=1.3e-55  Score=378.83  Aligned_cols=122  Identities=47%  Similarity=0.778  Sum_probs=112.3

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHhcCCCCCcCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhcCCCCCchh
Q 030081           55 EGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLH  134 (183)
Q Consensus        55 ~~V~~fYr~~H~~QTvdFV~~~~~~~~~~~~~~MtI~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~d~p~pDW~q  134 (183)
                      +||++|||+||++|||+||++||++|++|+|++|||||||++||+||||||||+++|||+|||||||+||++||+.||||
T Consensus         3 ~~V~~~Yr~~h~~QTv~fv~~~~~~~~~~~~~~mti~ea~~~Ln~lvDeSDPD~~v~ql~HaLQTAe~ar~dg~d~dw~~   82 (250)
T 2ibn_A            3 DRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFH   82 (250)
T ss_dssp             HHHHHHHHHHHHHCCHHHHHHHHHHHTTCCSCEECHHHHHHHGGGCCCTTC---CCCHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred             hHHHHHHHHHHhhhHHHHHHHHHHHHhccCCCCCcHHHHHHHHHHhcCCcCCCCcccHHHHHHHHHHHHHHhCcChhHHH
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999998779999


Q ss_pred             hhhhhhcccccccccCCCCCCCeeEecccCcC---------CCC---CCCCCCCccc
Q 030081          135 LTGLIHDLGKVLNLPSFGGLPQWAVVGELHFS---------FPP---PPNPNFLSKI  179 (183)
Q Consensus       135 LtGLIHDLGKvl~l~~fg~epQWaVVGDTF~~---------~~~---~~np~~~~~~  179 (183)
                      |+||||||||+|++   +++|||+||||||+-         ||.   +.|||+.||+
T Consensus        83 laaLlHDLGkll~~---~~~~qW~vvgdtfpvGc~f~~~iv~~e~~f~~NpD~~~~~  136 (250)
T 2ibn_A           83 LVGLLHDLGKVLAL---FGEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPR  136 (250)
T ss_dssp             HHHHHTTGGGHHHH---TTCCGGGTSSCCCBSSSCCCTTSTTHHHHCTTCGGGGCTT
T ss_pred             HHHHHhccHhhhcc---cCCcchhhccCcccccCccchhhcchhhcccCCCCCCCcc
Confidence            99999999999987   468999999999954         443   7999999995

>2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans}

Probab=95.86  E-value=0.005  Score=48.09  Aligned_cols=53  Identities=19%  Similarity=0.226  Sum_probs=40.7

Q ss_pred             cCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHh----cCCCCCchhhhhhhhcccccc
Q 030081           87 EMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRK----DYPDEDWLHLTGLIHDLGKVL  146 (183)
Q Consensus        87 ~MtI~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~----d~p~pDW~qLtGLIHDLGKvl  146 (183)
                      .|++.++.++|...+++       ....|.+.+|...+.    -+-+++-.-++||+||+||+.
T Consensus         1 ~~~~~~~~~~l~~~l~~-------~~~~Hs~~Va~~A~~lA~~~g~~~~~~~~agLLHDIGk~~   57 (188)
T 2o08_A            1 GMNRGKALQLVKPHLTE-------HRYQHTIGVMETAIDLAKLYGADQQKAELAAIFHDYAKFR   57 (188)
T ss_dssp             CCCHHHHHHHHGGGCCH-------HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTTTS
T ss_pred             CCCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHcCCC
Confidence            38899999999998753       478899888765543    233456688999999999985

>2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V}

Probab=95.52  E-value=0.0076  Score=47.58  Aligned_cols=53  Identities=21%  Similarity=0.251  Sum_probs=41.1

Q ss_pred             cCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHh----cCCCCCchhhhhhhhcccccc
Q 030081           87 EMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRK----DYPDEDWLHLTGLIHDLGKVL  146 (183)
Q Consensus        87 ~MtI~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~----d~p~pDW~qLtGLIHDLGKvl  146 (183)
                      .|++.++.++|...+++       ....|.+.+|...+.    -+-+++-..++||+||+||+.
T Consensus         9 ~~~~~~~~~~l~~~l~~-------~~~~Hs~~Va~~A~~lA~~~g~d~~~~~~AgLLHDIGK~~   65 (196)
T 2ogi_A            9 GLDRTELLSKVRHMMSD-------KRFNHVLGVERAAIELAERYGYDKEKAGLAALLHDYAKEL   65 (196)
T ss_dssp             SSCHHHHHHHHHTTSCH-------HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTTTC
T ss_pred             cccHHHHHHHHHHHCCH-------HHHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHcCCcC
Confidence            38999999999998763       377899888765543    233456788999999999985

>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824}

Probab=95.48  E-value=0.005  Score=48.18  Aligned_cols=53  Identities=23%  Similarity=0.288  Sum_probs=40.8

Q ss_pred             CCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHh----cCCCCCchhhhhhhhccccccc
Q 030081           88 MSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRK----DYPDEDWLHLTGLIHDLGKVLN  147 (183)
Q Consensus        88 MtI~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~----d~p~pDW~qLtGLIHDLGKvl~  147 (183)
                      |++.++.++|...+++       ....|.+.+|...+.    -+-+++-..++||+||+||+..
T Consensus         3 ~~~~~~~~~l~~~~~~-------~~~~Hs~~Va~~A~~lA~~~g~d~~~~~~AgLLHDiGk~~~   59 (190)
T 3ccg_A            3 WSYDKITDYLMNNLGE-------KRYKHSLGVMDTAVRLAGIYNEDTEKARIAGLVHDCAKKLP   59 (190)
T ss_dssp             CCHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTTTSC
T ss_pred             CCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCC
Confidence            7888999999988753       478898888765543    2335667889999999999863

>3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, STRU genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B}

Probab=92.37  E-value=0.14  Score=41.98  Aligned_cols=69  Identities=14%  Similarity=0.123  Sum_probs=44.1

Q ss_pred             hcCCCCCcCCHHHHHHHhh--------------hccCCCCCCCC---cchHHHHHHHHHHHH---h--------cCCCCC
Q 030081           80 YGKLNRVEMSIWECCELLN--------------DVVDESDPDLD---EPQIEHLLQTAEAIR---K--------DYPDED  131 (183)
Q Consensus        80 ~~~~~~~~MtI~EA~e~Ln--------------~lVDeSDPD~d---lpqi~H~lQTAEaIR---~--------d~p~pD  131 (183)
                      |.++.+.--||.+|+-+|-              .+.+...+-..   -....|.+.+|...+   +        ...+++
T Consensus        69 ~~~~~~~i~si~~Av~~LG~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~hs~~vA~~a~~la~~~~~~~~~~~~~~~  148 (281)
T 3i7a_A           69 LYSRGVPAENINSAVTRIGLTQIKSIATSVAMEQLFISTNEMVWEVMDEVWRTSIDVTAAACSLLQIYNKKHPGSGLNYD  148 (281)
T ss_dssp             TTCSSSCCCSHHHHHHHHCTTTHHHHHHHHTTGGGSCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCHH
T ss_pred             HhCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCHH
Confidence            4456677789999988754              22333322211   125678888765433   2        234567


Q ss_pred             chhhhhhhhcccccccc
Q 030081          132 WLHLTGLIHDLGKVLNL  148 (183)
Q Consensus       132 W~qLtGLIHDLGKvl~l  148 (183)
                      -+-++||+||+||+..+
T Consensus       149 ~~~laGLLHdiGkl~l~  165 (281)
T 3i7a_A          149 TLTLAGLVHNIGALPVL  165 (281)
T ss_dssp             HHHHHHHHTTTTHHHHH
T ss_pred             HHHHHHHHHHCCHHHHH
Confidence            88999999999998753

>3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, STRU genomics, joint center for structural genomics; 1.90A {Geobacter sulfurreducens}

Probab=91.95  E-value=0.13  Score=42.84  Aligned_cols=67  Identities=22%  Similarity=0.269  Sum_probs=44.1

Q ss_pred             CCCCCcCCHHHHHHHhh--------------hccCCCCCCCC-cchHHHHHHHHHHHHhc-----CCCCCchhhhhhhhc
Q 030081           82 KLNRVEMSIWECCELLN--------------DVVDESDPDLD-EPQIEHLLQTAEAIRKD-----YPDEDWLHLTGLIHD  141 (183)
Q Consensus        82 ~~~~~~MtI~EA~e~Ln--------------~lVDeSDPD~d-lpqi~H~lQTAEaIR~d-----~p~pDW~qLtGLIHD  141 (183)
                      ++.+.--||.+|+-+|-              ..........+ -....|.+.+|...+.-     .++++-+-++||+||
T Consensus        74 ~~~~~I~si~~Av~~LG~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~hs~~va~~a~~la~~~~~~~~~~~~~agllHD  153 (305)
T 3hc1_A           74 SAARPISSIRDAVIYLGLDLLREAIFTCAIVDLFKTGKGPLNRSTLWAHSLGVARIAKLIAERTGFLNPVNVYVAGLLHD  153 (305)
T ss_dssp             HTTSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHTTT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence            45677788999887754              11122212222 23478999988766542     235677899999999


Q ss_pred             ccccccc
Q 030081          142 LGKVLNL  148 (183)
Q Consensus       142 LGKvl~l  148 (183)
                      +||+...
T Consensus       154 IGkl~l~  160 (305)
T 3hc1_A          154 VGEVFIN  160 (305)
T ss_dssp             HHHHHHH
T ss_pred             hhHHHHH
Confidence            9999853

>3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1

Probab=90.94  E-value=0.16  Score=40.36  Aligned_cols=56  Identities=14%  Similarity=0.190  Sum_probs=32.7

Q ss_pred             HHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhc-CCCCCchhhhhhhhccccccc
Q 030081           92 ECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKD-YPDEDWLHLTGLIHDLGKVLN  147 (183)
Q Consensus        92 EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~d-~p~pDW~qLtGLIHDLGKvl~  147 (183)
                      ++.+.+.......|+.-++.-+.-.+..|..|.+. +.+++-+.+++|+||+||.-.
T Consensus         9 ~~~~~v~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~d~~~v~~AAlLHDig~~~~   65 (209)
T 3b57_A            9 SAKNWMHSHFENETTGHDWSHIKRVWKLSKEIQSKEGGDLFTIELAALFHDYSDIKL   65 (209)
T ss_dssp             HHHHHHHTTC------CCHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHTTCCC---
T ss_pred             HHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhccCcccC
Confidence            34444555554445555565555566677777663 457788999999999999753

>2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein S initiative, northeast structural genomics consortium; 2.00A {Staphylococcus epidermidis} SCOP: a.211.1.1

Probab=90.16  E-value=0.19  Score=40.51  Aligned_cols=54  Identities=19%  Similarity=0.302  Sum_probs=31.9

Q ss_pred             HHHHHhhhccCCCCCCCCcchHHHHHHHHHHH-Hh-cCCCCCchhhhhhhhccccc
Q 030081           92 ECCELLNDVVDESDPDLDEPQIEHLLQTAEAI-RK-DYPDEDWLHLTGLIHDLGKV  145 (183)
Q Consensus        92 EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaI-R~-d~p~pDW~qLtGLIHDLGKv  145 (183)
                      ++.+.+.......++.-++.-+...+++|..| .+ .+.+++-+.+++|+||+||.
T Consensus         9 ~~~~~v~~~~~~~~~~H~~~H~~rV~~~a~~i~a~~~~~d~~~l~lAAlLHDigk~   64 (225)
T 2qgs_A            9 KAYEYMKSFHQHDTTGHDIAHVERVYNNACYIAKRENITDTLVIELSSLLHDTVDS   64 (225)
T ss_dssp             HHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHTTTTCC
T ss_pred             HHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHcCCCC
Confidence            34444444444334433343333344455556 54 34578889999999999994

>3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus} PDB: 3ljv_A 3p3q_A

Probab=89.89  E-value=0.26  Score=40.83  Aligned_cols=67  Identities=18%  Similarity=0.214  Sum_probs=43.3

Q ss_pred             CCCCCcCCHHHHHHHhh-----------hccCC--CCC--CCCc-chHHHHHHHHHHHHhc-----CCCCCchhhhhhhh
Q 030081           82 KLNRVEMSIWECCELLN-----------DVVDE--SDP--DLDE-PQIEHLLQTAEAIRKD-----YPDEDWLHLTGLIH  140 (183)
Q Consensus        82 ~~~~~~MtI~EA~e~Ln-----------~lVDe--SDP--D~dl-pqi~H~lQTAEaIR~d-----~p~pDW~qLtGLIH  140 (183)
                      ++.+.--||.+|+.+|=           .+.+.  +.|  ..+. ....|.+++|...|.-     .++++-.-++||+|
T Consensus        63 ~~~~~I~si~~Av~~LG~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~hs~~~A~~a~~la~~~~~~~~~~~~~agLLh  142 (288)
T 3ljx_A           63 GTRRPVASVIDAIDLVGLPAVRQFALSLSLIDAHREGRCEAFDYAAYWQKSLARAVALQSITAQASTVAPKEAFTLGLLA  142 (288)
T ss_dssp             -CCSCCCSHHHHHHHHCHHHHHHHHHGGGC----CTTSCTTSCHHHHHHHHHHHHHHHHHHHHTSSSSCHHHHHHHHHHT
T ss_pred             CCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcccccHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Confidence            46677789999987653           11121  112  1222 2568999988866542     12567889999999


Q ss_pred             cccccccc
Q 030081          141 DLGKVLNL  148 (183)
Q Consensus       141 DLGKvl~l  148 (183)
                      |+||++..
T Consensus       143 diGkl~l~  150 (288)
T 3ljx_A          143 DVGRLALA  150 (288)
T ss_dssp             THHHHHHH
T ss_pred             hccHHHHH
Confidence            99999864

>3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1

Probab=89.73  E-value=0.26  Score=40.38  Aligned_cols=57  Identities=18%  Similarity=0.121  Sum_probs=37.1

Q ss_pred             HHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHh-cCCCCCchhhhhhhhcccccc
Q 030081           90 IWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRK-DYPDEDWLHLTGLIHDLGKVL  146 (183)
Q Consensus        90 I~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~-d~p~pDW~qLtGLIHDLGKvl  146 (183)
                      |..+.+.+.......|+.-++.-+.-.+.+|..|-+ .+-+++-+.+++|+||+||.-
T Consensus         7 i~~~~~~v~~~l~~~~~~H~~~H~~rV~~~a~~ia~~~~~d~~~l~~AalLHDig~~k   64 (223)
T 3dto_A            7 LQSAEAWVKKQLMDEYSGHDWYHIRRVTLMAKAIGEQEKVDVFVVQIAALFHDLIDDK   64 (223)
T ss_dssp             HHHHHHHHHHTTTTC----CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSTTC--
T ss_pred             HHHHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhccccc
Confidence            444555566666666677777777777778888744 345678899999999999974

>3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1

Probab=89.64  E-value=0.19  Score=41.09  Aligned_cols=57  Identities=12%  Similarity=0.211  Sum_probs=39.5

Q ss_pred             HHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhc-CCCCCchhhhhhhhcccccc
Q 030081           90 IWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKD-YPDEDWLHLTGLIHDLGKVL  146 (183)
Q Consensus        90 I~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~d-~p~pDW~qLtGLIHDLGKvl  146 (183)
                      |..+.+.+.......|+.-++.-+.-.+.+|..|-+. +.+++-+.+++|+||+||.-
T Consensus         7 i~~~~~~v~~~l~~~~~~H~~~H~~rV~~~a~~ia~~~~~d~~~l~~AAlLHDig~~k   64 (223)
T 3djb_A            7 IEKTITFVKHILEKDASGHDWYHIRRVHKMAISLSEQEGGNRFIIEMAALLHDVADEK   64 (223)
T ss_dssp             HHHHHHHHHHHTTSSSCTTTHHHHHHHHHHHHHHHTTTCSCHHHHHHHHTTHHHHC--
T ss_pred             HHHHHHHHHHHhhcCCCcCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhccccc
Confidence            3444455555555566666777777777788887554 45778899999999999954

>2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1

Probab=89.03  E-value=0.29  Score=39.70  Aligned_cols=59  Identities=8%  Similarity=0.051  Sum_probs=40.6

Q ss_pred             CCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhc-CCCCCchhhhhhhhcccccc
Q 030081           88 MSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKD-YPDEDWLHLTGLIHDLGKVL  146 (183)
Q Consensus        88 MtI~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~d-~p~pDW~qLtGLIHDLGKvl  146 (183)
                      +-|.++.+.+...+...++.-++.-+.-.++.|..|.+. +.+++-+.+++|+||+||.-
T Consensus        10 ~~i~~~~~~v~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~d~~ll~lAAlLHDigk~k   69 (231)
T 2pjq_A           10 TQLTAIQTYALQKLAHDHSGHGRDHLQRVNRLARRLAKDEGANLNLTLAAAWLHDVIDDK   69 (231)
T ss_dssp             HHHHHHHHHHHTSSTTCCSSCSHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCccc
Confidence            335566666666666555666666666667777777663 45778899999999999953

>3m1t_A Putative phosphohydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE GOL; 1.62A {Shewanella amazonensis} SCOP: a.211.1.0

Probab=88.88  E-value=0.22  Score=40.92  Aligned_cols=66  Identities=15%  Similarity=0.100  Sum_probs=41.3

Q ss_pred             CCCCCcCCHHHHHHHhh--------------hccCCCCCCCCc-chHHHHHHHHHHHHh----cCCCCCchhhhhhhhcc
Q 030081           82 KLNRVEMSIWECCELLN--------------DVVDESDPDLDE-PQIEHLLQTAEAIRK----DYPDEDWLHLTGLIHDL  142 (183)
Q Consensus        82 ~~~~~~MtI~EA~e~Ln--------------~lVDeSDPD~dl-pqi~H~lQTAEaIR~----d~p~pDW~qLtGLIHDL  142 (183)
                      ++.+.--||.+|+-+|=              ..... .|..++ ....|.+.+|...+.    -+.+++-.-++||+||+
T Consensus        62 ~~~~~i~si~~Av~~LG~~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~hs~~~a~~a~~la~~~~~~~~~~~~agLLhdi  140 (275)
T 3m1t_A           62 GCSREVGTIDDAVVRLGMQTLRTLVIASAVVGAVPK-VEGFDLADFWGNTFEVAIICQELAKRLGTLPEEAFTCGILHSI  140 (275)
T ss_dssp             ----CCCSHHHHHHHHCHHHHHHHHHHHHHHHHCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccC-CCccCHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHc
Confidence            34556778888877653              12222 233332 356789888865543    34467888999999999


Q ss_pred             cccccc
Q 030081          143 GKVLNL  148 (183)
Q Consensus       143 GKvl~l  148 (183)
                      ||++..
T Consensus       141 Gkl~l~  146 (275)
T 3m1t_A          141 GELLIV  146 (275)
T ss_dssp             HHHHHH
T ss_pred             cHHHHH
Confidence            999864

>1vqr_A Hypothetical protein CJ0248; HD-domain/pdease-like fold, structural genomics, joint cente structural genomics, JCSG; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3

Probab=86.79  E-value=0.31  Score=40.15  Aligned_cols=69  Identities=22%  Similarity=0.203  Sum_probs=41.5

Q ss_pred             hcCCCCCcCCHHHHHHHhh-----hcc------CC--CCCC---CCc-chHHHHHHHHHHHHhcC-----CCCCchhhhh
Q 030081           80 YGKLNRVEMSIWECCELLN-----DVV------DE--SDPD---LDE-PQIEHLLQTAEAIRKDY-----PDEDWLHLTG  137 (183)
Q Consensus        80 ~~~~~~~~MtI~EA~e~Ln-----~lV------De--SDPD---~dl-pqi~H~lQTAEaIR~d~-----p~pDW~qLtG  137 (183)
                      |.++.+.--||.+|+.+|-     +++      +.  +++.   .+. .-..|.+.+|..+++-.     .+++-.-++|
T Consensus        76 ~~~~~~~i~si~~Av~~LG~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~hs~~va~~a~~la~~~~~~~~e~a~~aG  155 (297)
T 1vqr_A           76 YYGFTREITTINQVITLLGVGNIINIVMADSIRDNFKIDVSPYGLNTQNFLKTCNEEATFIANWLNDEDKKLSHLLVPCA  155 (297)
T ss_dssp             GGTCTTCCCSHHHHHHHHCHHHHHHHHHCCCTTCCCCCCCGGGTCCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHH
Confidence            3456666789999988774     111      11  1111   111 24567777666554422     2346677899


Q ss_pred             hhhcccccccc
Q 030081          138 LIHDLGKVLNL  148 (183)
Q Consensus       138 LIHDLGKvl~l  148 (183)
                      |+||+||+...
T Consensus       156 LLHDIGkl~l~  166 (297)
T 1vqr_A          156 MLLRLGIVIFS  166 (297)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHccHHHHH
Confidence            99999999853

>3sk9_A Putative uncharacterized protein TTHB187; crispr, CAS, HD domain, nuclease, hydrolase; 1.80A {Thermus thermophilus HB8} PDB: 3skd_A

Probab=86.65  E-value=0.26  Score=41.60  Aligned_cols=42  Identities=31%  Similarity=0.413  Sum_probs=32.1

Q ss_pred             cchHHHHHHHHHHHHhc----------------CCC----CCchhhhhhhhcccccccccCCCC
Q 030081          110 EPQIEHLLQTAEAIRKD----------------YPD----EDWLHLTGLIHDLGKVLNLPSFGG  153 (183)
Q Consensus       110 lpqi~H~lQTAEaIR~d----------------~p~----pDW~qLtGLIHDLGKvl~l~~fg~  153 (183)
                      .|...|++-||+..+.-                +..    ..|+.+.|++||+||.-  +.|..
T Consensus        24 ~~L~~HllDvAava~~L~~~~~~~~r~~la~~~g~~~~~~~~~~~~~~~lHDiGK~~--~~fq~   85 (265)
T 3sk9_A           24 HPLLAHMLDTAAVALAVLRMEPPRTRALYAEDWGLPEEGALAWAAALVGLHDLGKAS--PVFQA   85 (265)
T ss_dssp             SBHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHTSCHHHHHHHHHHHHTTTTGGGCS--GGGCC
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhccccc--HHHHH
Confidence            88999999999886651                211    36899999999999995  44553

>2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1

Probab=86.58  E-value=0.55  Score=37.11  Aligned_cols=57  Identities=18%  Similarity=0.124  Sum_probs=33.8

Q ss_pred             HHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhc-CCCCCchhhhhhhhcccccc
Q 030081           90 IWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKD-YPDEDWLHLTGLIHDLGKVL  146 (183)
Q Consensus        90 I~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~d-~p~pDW~qLtGLIHDLGKvl  146 (183)
                      +.++.+.+.......++..++.-+......|..|-+. +.+++-+.++||+||+|+-.
T Consensus        15 ~~~~~~~v~~~~~~~~~~h~~~H~~rV~~~a~~la~~~~~d~~~l~~AaLLHDIg~~~   72 (220)
T 2pq7_A           15 REILNIVREAFKDYDDPAHDISHTFRVMENASEIASREKCDLQKAIIAALLHDIKRPH   72 (220)
T ss_dssp             HHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTHHH
T ss_pred             HHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCCcc
Confidence            4445555555554444444444444444445555442 34667889999999999743

>3kq5_A Hypothetical cytosolic protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Coxiella burnetii}

Probab=81.60  E-value=0.45  Score=43.34  Aligned_cols=37  Identities=14%  Similarity=0.174  Sum_probs=28.8

Q ss_pred             cchHHHHHH-H---HHHHHhcCCCC-----Cchhhhhhhhcccccc
Q 030081          110 EPQIEHLLQ-T---AEAIRKDYPDE-----DWLHLTGLIHDLGKVL  146 (183)
Q Consensus       110 lpqi~H~lQ-T---AEaIR~d~p~p-----DW~qLtGLIHDLGKvl  146 (183)
                      =..++|.|. +   |..|++.||..     +=+-..||+||+||++
T Consensus        74 GGLLeHtLerVa~~A~~l~~~YP~~~~~Er~~l~~aALLHDIGKl~  119 (393)
T 3kq5_A           74 CSLMNEGLLRGVNSLNHYIQNHPEATPLERYALFSAGLLLEVAHAV  119 (393)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHTTTTHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhccchhe
Confidence            347889999 5   78889999642     2456789999999997

>3tm8_A BD1817, uncharacterized protein; HD-GYP, phosphodiesterase, unknown function, hydrolase,signa protein; 1.28A {Bdellovibrio bacteriovorus} PDB: 3tmb_A 3tmc_A 3tmd_A

Probab=80.34  E-value=1.5  Score=37.13  Aligned_cols=39  Identities=21%  Similarity=0.156  Sum_probs=26.2

Q ss_pred             CcchHHHHHHHHHHHHhc----CCCCCc----hhhhhhhhccccccc
Q 030081          109 DEPQIEHLLQTAEAIRKD----YPDEDW----LHLTGLIHDLGKVLN  147 (183)
Q Consensus       109 dlpqi~H~lQTAEaIR~d----~p~pDW----~qLtGLIHDLGKvl~  147 (183)
                      |-....|.+.+|...+.-    +-++++    +-++||+||+||+..
T Consensus       164 ~~~~~~Hs~~Va~la~~la~~lgl~~~~~~~~l~~aaLLHDIGk~~i  210 (328)
T 3tm8_A          164 DKTISHHGVTVSTLSIALAQKLGITDPKKTQLLTLGALLHDYGHHHS  210 (328)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTGGGTTC
T ss_pred             CchHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHhcCCcccC
Confidence            344678999887755432    223455    445999999999963

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	183
d2ibna1	249	a.211.1.4 (A:37-285) Myo-inositol oxygenase MioX {	9e-54

>d2ibna1 a.211.1.4 (A:37-285) Myo-inositol oxygenase MioX {Human (Homo sapiens) [TaxId: 9606]} Length = 249

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: MioX-like
domain: Myo-inositol oxygenase MioX
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  169 bits (429), Expect = 9e-54
 Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 3/108 (2%)

Query: 55  EGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIE 114
           + V   Y++ H +QT DFV+    ++G  +  +M++ E  +LL+ +VDESDPD+D P   
Sbjct: 2   DRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSF 61

Query: 115 HLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGE 162
           H  QTAE IRK +PD+DW HL GL+HDLGKVL   +  G PQWAVVG+
Sbjct: 62  HAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVL---ALFGEPQWAVVGD 106

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	183
d2ibna1	249	Myo-inositol oxygenase MioX {Human (Homo sapiens)	100.0
d3b57a1	201	Uncharacterized protein Lin1889 {Listeria innocua	87.9
d3dtoa1	212	Uncharacterized protein BH2835 {Bacillus haloduran	84.79
d2pq7a1	217	Predicted hydrolase mes0020 {Uncultured thermotoga	81.24

>d2ibna1 a.211.1.4 (A:37-285) Myo-inositol oxygenase MioX {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: MioX-like
domain: Myo-inositol oxygenase MioX
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-61  Score=409.25  Aligned_cols=122  Identities=48%  Similarity=0.811  Sum_probs=112.9

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHhcCCCCCcCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhcCCCCCchh
Q 030081           55 EGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLH  134 (183)
Q Consensus        55 ~~V~~fYr~~H~~QTvdFV~~~~~~~~~~~~~~MtI~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~d~p~pDW~q  134 (183)
                      +||++|||+||++||||||++||++|++|++++||||||+++||+|||+||||+|+|||.|||||||+||++||+|||||
T Consensus         2 drV~~~Y~~~h~~QT~dfv~~~~~~~~~~~~~~mti~eale~Ln~lvD~SDPD~~lpn~~H~~QTAE~iR~~~~~~dW~q   81 (249)
T d2ibna1           2 DRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFH   81 (249)
T ss_dssp             HHHHHHHHHHHHHCCHHHHHHHHHHHTTCCSCEECHHHHHHHGGGCCCTTC---CCCHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred             chHHHHHHHHHHhhHHHHHHHHHHHHhcCCcceeEHHHHHHHHHhhcCCCCCCCCchhHHHHHHHHHHHHHhCCCcchHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhcccccccccCCCCCCCeeEecccCcC---------CCC---CCCCCCCccc
Q 030081          135 LTGLIHDLGKVLNLPSFGGLPQWAVVGELHFS---------FPP---PPNPNFLSKI  179 (183)
Q Consensus       135 LtGLIHDLGKvl~l~~fg~epQWaVVGDTF~~---------~~~---~~np~~~~~~  179 (183)
                      ||||||||||||++  || +|||+||||||+=         ||+   +.|||+.+|.
T Consensus        82 L~GLiHDLGKvl~~--~g-e~qW~vVGDTf~vGC~~~~~iv~~e~~f~~NpD~~~~~  135 (249)
T d2ibna1          82 LVGLLHDLGKVLAL--FG-EPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPR  135 (249)
T ss_dssp             HHHHHTTGGGHHHH--TT-CCGGGTSSCCCBSSSCCCTTSTTHHHHCTTCGGGGCTT
T ss_pred             hhhhhhhhHHHhHh--cC-CCceeeecccceecccCCccccccccccccCccccCCc
Confidence            99999999999988  65 8999999999953         555   6799998885

>d3b57a1 a.211.1.1 (A:1-201) Uncharacterized protein Lin1889 {Listeria innocua [TaxId: 1642]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Uncharacterized protein Lin1889
species: Listeria innocua [TaxId: 1642]

Probab=87.90  E-value=0.17  Score=38.18  Aligned_cols=58  Identities=16%  Similarity=0.209  Sum_probs=39.6

Q ss_pred             CHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhc-CCCCCchhhhhhhhcccccc
Q 030081           89 SIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKD-YPDEDWLHLTGLIHDLGKVL  146 (183)
Q Consensus        89 tI~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~d-~p~pDW~qLtGLIHDLGKvl  146 (183)
                      -|..+.+.+.......||.=|+.-+.-.++.|+.|-+. +-++.-+.+++|+||+|..=
T Consensus         6 ~i~~~~~~v~~~~~~~~~~Hd~~H~~rV~~~A~~Ia~~e~~d~~~v~~AAlLHDi~~~k   64 (201)
T d3b57a1           6 IILSAKNWMHSHFENETTGHDWSHIKRVWKLSKEIQSKEGGDLFTIELAALFHDYSDIK   64 (201)
T ss_dssp             HHHHHHHHHHTTC------CCHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHTTCCC--
T ss_pred             HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHCCccHHHHHHHHHHhhccccc
Confidence            35667777777777777877888888888888887664 34678889999999999853

>d3dtoa1 a.211.1.1 (A:2-213) Uncharacterized protein BH2835 {Bacillus halodurans [TaxId: 86665]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Uncharacterized protein BH2835
species: Bacillus halodurans [TaxId: 86665]

Probab=84.79  E-value=0.33  Score=36.98  Aligned_cols=56  Identities=18%  Similarity=0.128  Sum_probs=39.4

Q ss_pred             HHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhcCC-CCCchhhhhhhhccccc
Q 030081           90 IWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYP-DEDWLHLTGLIHDLGKV  145 (183)
Q Consensus        90 I~EA~e~Ln~lVDeSDPD~dlpqi~H~lQTAEaIR~d~p-~pDW~qLtGLIHDLGKv  145 (183)
                      |.++...+....++-++.=++.-+.-.++.|+.|-+..+ +++-+.+++++||+|..
T Consensus         6 i~~~~~~v~~~~~~~~~~H~~~H~~rV~~~A~~Ia~~e~~D~~vv~~aAllHDig~~   62 (212)
T d3dtoa1           6 LQSAEAWVKKQLMDEYSGHDWYHIRRVTLMAKAIGEQEKVDVFVVQIAALFHDLIDD   62 (212)
T ss_dssp             HHHHHHHHHHTTTTC----CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSTTC-
T ss_pred             HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHcccccc
Confidence            345566677777777777778888888888888765543 67889999999999964

>d2pq7a1 a.211.1.1 (A:1-217) Predicted hydrolase mes0020 {Uncultured thermotogales bacterium [TaxId: 221214]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Predicted hydrolase mes0020
species: Uncultured thermotogales bacterium [TaxId: 221214]

Probab=81.24  E-value=0.4  Score=36.69  Aligned_cols=55  Identities=18%  Similarity=0.308  Sum_probs=35.8

Q ss_pred             HHHHHhhhccCC-CCCCCCcchHHHHHHHHHHHHhcCC-CCCchhhhhhhhcccccc
Q 030081           92 ECCELLNDVVDE-SDPDLDEPQIEHLLQTAEAIRKDYP-DEDWLHLTGLIHDLGKVL  146 (183)
Q Consensus        92 EA~e~Ln~lVDe-SDPD~dlpqi~H~lQTAEaIR~d~p-~pDW~qLtGLIHDLGKvl  146 (183)
                      +.++++.+.... .||.=|+.-+.-..+.|..|-+..+ +++=..+++|+||+|+.-
T Consensus        15 ~i~~~v~~~~~~~~d~sHd~~H~~RV~~~A~~Ia~~e~~D~~vv~~AALLHDIg~~~   71 (217)
T d2pq7a1          15 EILNIVREAFKDYDDPAHDISHTFRVMENASEIASREKCDLQKAIIAALLHDIKRPH   71 (217)
T ss_dssp             HHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTHHH
T ss_pred             HHHHHHHHHHhhCCCCCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhhhcchh
Confidence            333444444433 3566677777777777777766543 556678999999999743