Citrus Sinensis ID: 030139

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180--
Protein Sequence
MASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccEEEEcccccHHcHHHHHHHHcccEEEcccccccccccccEEEEEccccEEEEEEccccccccEEEEEEccccccHHHHHHHHHHHHHccEEEEEEEEEEcccccccccccccccEEccc
Secondary Structure Prediction (SSPRO)
ccHHHcccccHHHHHHHHccEEEcccccccccEEEcHHHHccHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHccEEEEEEEcccccccEEEEEEEccccEEEEEEEccccccccEEEEEEEEEcccHHHHHHHHHHHHcccEEEEEEEEEEccccccccccccccEEEEEc
Coil and Loop (DISEMBL)
masadvkaqdpriagISSAirvipdfpkpgimfqDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGieargfifgppialaigakfvpmrkpkklpgeviseeysleygkdVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECAcvielpelkgrerlgekplfvlvs
Flexible Loop (DISEMBL)
masadvkaqdpriagissairvipdfpkpGIMFQDITTLLLDTKAFRDTIDLFVerykdknisvVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVielpelkgrerlgekplfvlvs
Low Complexity Region (SEG)
MASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS
Disordered region (IsUnstruct)
*************AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL****LFV***
Disordered Region (DISOPRED)
***************ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS
Disordered Region (DISEMBL)
**********PRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS
Disordered Region (DISPRO)
*********DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	182	2.2.26 [Sep-21-2011]
P31166	243	Adenine phosphoribosyltra	yes	no	0.983	0.736	0.839	3e-84
Q43199	181	Adenine phosphoribosyltra	N/A	no	0.961	0.966	0.788	1e-76
Q42563	192	Adenine phosphoribosyltra	no	no	0.945	0.895	0.732	6e-68
Q04WP5	177	Adenine phosphoribosyltra	yes	no	0.906	0.932	0.541	8e-49
Q04NG3	177	Adenine phosphoribosyltra	yes	no	0.906	0.932	0.541	8e-49
A1SX04	181	Adenine phosphoribosyltra	yes	no	0.939	0.944	0.554	2e-48
A3QF54	181	Adenine phosphoribosyltra	yes	no	0.934	0.939	0.529	3e-48
Q8EXN2	177	Adenine phosphoribosyltra	yes	no	0.895	0.920	0.530	2e-47
Q75FP0	177	Adenine phosphoribosyltra	yes	no	0.895	0.920	0.530	2e-47
A8FX87	184	Adenine phosphoribosyltra	yes	no	0.917	0.907	0.502	9e-47

>sp|P31166|APT1_ARATH Adenine phosphoribosyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=APT1 PE=1 SV=2

 Score =  310 bits (795), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 152/181 (83%), Positives = 169/181 (93%), Gaps = 2/181 (1%)

Query: 1   MASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK 60
           MA+ DV  QDPRIA I+S+IRVIPDFPKPGIMFQDITTLLLDT+AF+DTI LFV+RYKDK
Sbjct: 61  MATEDV--QDPRIAKIASSIRVIPDFPKPGIMFQDITTLLLDTEAFKDTIALFVDRYKDK 118

Query: 61  NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGA 120
            ISVVAG+EARGFIFGPPIALAIGAKFVPMRKPKKLPG+VISEEYSLEYG D +EMHVGA
Sbjct: 119 GISVVAGVEARGFIFGPPIALAIGAKFVPMRKPKKLPGKVISEEYSLEYGTDTIEMHVGA 178

Query: 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 180
           V+ GERA+I+DDL+ATGGTL+AAIRLLERVGV +VECACVIELPELKG+E+LGE  LFVL
Sbjct: 179 VEPGERAIIIDDLIATGGTLAAAIRLLERVGVKIVECACVIELPELKGKEKLGETSLFVL 238

Query: 181 V 181
           V
Sbjct: 239 V 239

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 7

>sp|Q43199|APT1_WHEAT Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1 PE=2 SV=1

 Score =  285 bits (729), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 138/175 (78%), Positives = 157/175 (89%)

Query: 8   AQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAG 67
           A D R+  I+S+IR IP+FPKPGI+FQDITTLLLD +AFRDT DLFVERYKDK+I+VVAG
Sbjct: 2   ASDGRVERIASSIRAIPNFPKPGILFQDITTLLLDPQAFRDTTDLFVERYKDKDITVVAG 61

Query: 68  IEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERA 127
           +EARGFIFGPPIALAIGAKFVP+RKPKKLPGEVISEEYSLEYG D +EMHVGAVQ  +R 
Sbjct: 62  VEARGFIFGPPIALAIGAKFVPIRKPKKLPGEVISEEYSLEYGTDKIEMHVGAVQPNDRV 121

Query: 128 LIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 182
           LIVDDL+ATGGTL AA +L+ERVG  VVECACVIELPELKGR++LG+ P+FVLV 
Sbjct: 122 LIVDDLIATGGTLCAAAKLIERVGAKVVECACVIELPELKGRDKLGDMPVFVLVQ 176

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Triticum aestivum (taxid: 4565)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|Q42563|APT2_ARATH Adenine phosphoribosyltransferase 2 OS=Arabidopsis thaliana GN=APT2 PE=2 SV=1

 Score =  256 bits (654), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 126/172 (73%), Positives = 145/172 (84%)

Query: 10  DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIE 69
           DPR+  IS AIRVIP FPK GIMFQDITTLLLD  AF+  +D+FV+RYK  NIS+VAG+E
Sbjct: 11  DPRLKAISDAIRVIPHFPKTGIMFQDITTLLLDPVAFKHVVDIFVDRYKHMNISLVAGVE 70

Query: 70  ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALI 129
           ARGFIFGPPIALAIGAKFVP+RKP KLPG VISEEY LEYG+D +EM V AV++ ERALI
Sbjct: 71  ARGFIFGPPIALAIGAKFVPLRKPGKLPGRVISEEYELEYGRDCLEMSVEAVKSEERALI 130

Query: 130 VDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 181
           +DDLVATGGTLSA+I LLER G  VVECACV+ LP+ KG+ +L  KPL+VLV
Sbjct: 131 IDDLVATGGTLSASINLLERAGAEVVECACVVGLPKFKGQCKLKGKPLYVLV 182

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|Q04WP5|APT_LEPBL Adenine phosphoribosyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=apt PE=3 SV=1

 Score =  192 bits (489), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 91/168 (54%), Positives = 126/168 (75%), Gaps = 3/168 (1%)

Query: 16  ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIF 75
           + S IR IPD+PKPGI+F+DIT+LLLD +    TI  FV RY+DK I+ VAGIEARGF+ 
Sbjct: 4   VKSKIRTIPDYPKPGILFRDITSLLLDPEGLALTIGTFVNRYQDKGITKVAGIEARGFLT 63

Query: 76  GPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVA 135
           G P+A  +G  F+P+RK  KLP E +SEEY LEYGKDV+E+H  AVQ G++ L++DDL+A
Sbjct: 64  GAPLAFQLGVGFIPIRKKGKLPAETVSEEYDLEYGKDVIEIHKDAVQPGDKILLMDDLIA 123

Query: 136 TGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK---PLFVL 180
           TGGT+ AA++LL+++G  + E   +I+LP+L G ++L EK   P+F +
Sbjct: 124 TGGTMIAAVKLLKKLGAQIYEAGVIIDLPDLGGSKKLQEKLEVPVFAI 171

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) (taxid: 355276)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|Q04NG3|APT_LEPBJ Adenine phosphoribosyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=apt PE=3 SV=1

 Score =  192 bits (489), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 91/168 (54%), Positives = 126/168 (75%), Gaps = 3/168 (1%)

Query: 16  ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIF 75
           + S IR IPD+PKPGI+F+DIT+LLLD +    TI  FV RY+DK I+ VAGIEARGF+ 
Sbjct: 4   VKSKIRTIPDYPKPGILFRDITSLLLDPEGLALTIGTFVNRYQDKGITKVAGIEARGFLT 63

Query: 76  GPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVA 135
           G P+A  +G  F+P+RK  KLP E +SEEY LEYGKDV+E+H  AVQ G++ L++DDL+A
Sbjct: 64  GAPLAFQLGVGFIPIRKKGKLPAETVSEEYDLEYGKDVIEIHKDAVQPGDKILLMDDLIA 123

Query: 136 TGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK---PLFVL 180
           TGGT+ AA++LL+++G  + E   +I+LP+L G ++L EK   P+F +
Sbjct: 124 TGGTMIAAVKLLKKLGAQIYEAGVIIDLPDLGGSKKLQEKLEVPVFAI 171

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) (taxid: 355277)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|A1SX04|APT_PSYIN Adenine phosphoribosyltransferase OS=Psychromonas ingrahamii (strain 37) GN=apt PE=3 SV=1

 Score =  191 bits (486), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 96/173 (55%), Positives = 122/173 (70%), Gaps = 2/173 (1%)

Query: 11  PRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEA 70
           P +  I + I+ IPD+P PGIMF+DIT+L+ +  AF  TI+L VERYKD+NIS V G EA
Sbjct: 4   PTLEEIKNCIKSIPDYPIPGIMFRDITSLIENGAAFSATINLLVERYKDQNISKVVGTEA 63

Query: 71  RGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIV 130
           RGFIFG P+A AIGA FVP+RKP KLP   + E Y LEYG D + +H  A++  ER L+V
Sbjct: 64  RGFIFGAPLAAAIGAGFVPVRKPGKLPRTTVHENYELEYGTDSLHIHSDAIKKNERVLLV 123

Query: 131 DDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV 181
           DDL+ATGGT  A+I+L+ R G  V+E A VIELP LKG ++L     P F L+
Sbjct: 124 DDLLATGGTAEASIKLIHRSGGIVIESAFVIELPALKGAQKLHALNVPYFSLI 176

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Psychromonas ingrahamii (strain 37) (taxid: 357804)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|A3QF54|APT_SHELP Adenine phosphoribosyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=apt PE=3 SV=2

 Score =  191 bits (485), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 90/170 (52%), Positives = 124/170 (72%)

Query: 12  RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEAR 71
           ++A I  +I+ IPD+PKPGIMF+D+T+L+ D  A++ TI LFVERYKD  ++ V G EAR
Sbjct: 5   KLALIKQSIKTIPDYPKPGIMFRDVTSLMEDPAAYQATIALFVERYKDLGVTKVVGTEAR 64

Query: 72  GFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVD 131
           GF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D++E+H  A++ G++ L+VD
Sbjct: 65  GFLFGAPLALELGVGFVPVRKPGKLPRETISESYELEYGHDMLEIHTDAIKPGDKVLVVD 124

Query: 132 DLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 181
           DL+ATGGT+ A ++L+ ++G  V   A VI LPEL G  RL E  L ++ 
Sbjct: 125 DLLATGGTIEATVKLIRQLGGEVEHAAFVISLPELGGEHRLAEMGLSLMT 174

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Shewanella loihica (strain ATCC BAA-1088 / PV-4) (taxid: 323850)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|Q8EXN2|APT_LEPIN Adenine phosphoribosyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) GN=apt PE=3 SV=1

 Score =  188 bits (477), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 88/166 (53%), Positives = 125/166 (75%), Gaps = 3/166 (1%)

Query: 16  ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIF 75
           + S IR IPD+PKPGI+F+DIT+LLLD +    TI  FV RY+ K I+ VAGIEARGF+ 
Sbjct: 4   VKSKIRTIPDYPKPGILFRDITSLLLDPEGLALTIGTFVNRYQGKGITKVAGIEARGFLT 63

Query: 76  GPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVA 135
           G P+A  +G  F+P+RK  KLP E +SEEY LEYGKDV+E+H  ++Q G++ L++DDL+A
Sbjct: 64  GAPLAFQLGVGFIPIRKKGKLPSETVSEEYDLEYGKDVIEVHKDSIQPGDKILLMDDLIA 123

Query: 136 TGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK---PLF 178
           TGGT+ AA++LL+++G  + E   +I+LP+L GR++L E+   P+F
Sbjct: 124 TGGTMIAAVKLLKKLGAEIYEAGVIIDLPDLGGRKKLQEELKVPVF 169

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) (taxid: 189518)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|Q75FP0|APT_LEPIC Adenine phosphoribosyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) GN=apt PE=3 SV=1

 Score =  188 bits (477), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 88/166 (53%), Positives = 125/166 (75%), Gaps = 3/166 (1%)

Query: 16  ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIF 75
           + S IR IPD+PKPGI+F+DIT+LLLD +    TI  FV RY+ K I+ VAGIEARGF+ 
Sbjct: 4   VKSKIRTIPDYPKPGILFRDITSLLLDPEGLALTIGTFVNRYQGKGITKVAGIEARGFLT 63

Query: 76  GPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVA 135
           G P+A  +G  F+P+RK  KLP E +SEEY LEYGKDV+E+H  ++Q G++ L++DDL+A
Sbjct: 64  GAPLAFQLGVGFIPIRKKGKLPSETVSEEYDLEYGKDVIEVHKDSIQPGDKILLMDDLIA 123

Query: 136 TGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK---PLF 178
           TGGT+ AA++LL+++G  + E   +I+LP+L GR++L E+   P+F
Sbjct: 124 TGGTMIAAVKLLKKLGAEIYEAGVIIDLPDLGGRKKLQEELKVPVF 169

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) (taxid: 267671)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|A8FX87|APT_SHESH Adenine phosphoribosyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=apt PE=3 SV=1

 Score =  186 bits (471), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 84/167 (50%), Positives = 120/167 (71%)

Query: 6   VKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVV 65
           +   +  +A I  +I+ IPD+PKPGI+F+D+T+LL D  A++ T+D+ VE+YKD+  + V
Sbjct: 2   ISMNNDTLAVIKQSIKTIPDYPKPGILFRDVTSLLEDHTAYKATMDILVEKYKDQGFTKV 61

Query: 66  AGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGE 125
            G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG DV+E+HV A+   +
Sbjct: 62  VGTEARGFLFGAPLALELGLGFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINEND 121

Query: 126 RALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 172
           + L++DDL+ATGGT+ A ++L+  +G  V   A VI LP+L G +RL
Sbjct: 122 KVLVIDDLLATGGTIEATVKLIRNLGGKVNHAAFVISLPDLGGEKRL 168

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Shewanella sediminis (strain HAW-EB3) (taxid: 425104)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	182
82621166	182	adenine phosphoribosyltransferase-like [	1.0	1.0	0.901	2e-86
289540890	186	adeninephosphoribosyl transferase [Trifo	0.994	0.973	0.872	3e-86
224129882	255	predicted protein [Populus trichocarpa]	0.994	0.709	0.868	3e-86
388520489	184	unknown [Medicago truncatula]	0.983	0.972	0.867	1e-84
388503084	179	unknown [Lotus japonicus]	0.961	0.977	0.891	1e-84
351722933	236	uncharacterized protein LOC100305792 [Gl	0.994	0.766	0.846	2e-84
255538084	253	Adenine phosphoribosyltransferase, putat	0.989	0.711	0.862	2e-84
356514471	235	PREDICTED: adenine phosphoribosyltransfe	0.989	0.765	0.845	6e-84
297845694	242	hypothetical protein ARALYDRAFT_472949 [	0.989	0.743	0.846	1e-83
18396344	243	adenine phosphoribosyltransferase 1 [Ara	0.983	0.736	0.839	1e-82

>gi|82621166|gb|ABB86271.1| adenine phosphoribosyltransferase-like [Solanum tuberosum]

 Score =  323 bits (828), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 164/182 (90%), Positives = 170/182 (93%)

Query: 1   MASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK 60
           MA  D   +D RIAGI+SAIRVIPDFPKPGIMFQDITTLLLD KAF+DTIDLFVERYKDK
Sbjct: 1   MAPHDPILKDERIAGIASAIRVIPDFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYKDK 60

Query: 61  NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGA 120
           NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYG D MEMHVGA
Sbjct: 61  NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGTDKMEMHVGA 120

Query: 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 180
           VQAGE AL+VDDL+ATGGTLSAAIRLLERVGV V ECACVIELPELKGRERLG+KPLFVL
Sbjct: 121 VQAGECALVVDDLIATGGTLSAAIRLLERVGVEVFECACVIELPELKGRERLGDKPLFVL 180

Query: 181 VS 182
           VS
Sbjct: 181 VS 182

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|289540890|gb|ADD09567.1| adeninephosphoribosyl transferase [Trifolium repens] gi|289540907|gb|ADD09581.1| adeninephosphoribosyl transferase [Trifolium repens]

 Score =  322 bits (826), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 158/181 (87%), Positives = 171/181 (94%)

Query: 1   MASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK 60
           MAS D K QDPRIAGISSAIR+IPDFPKPGIMFQDITTLLLDTKAF+DTIDLFVERY+D+
Sbjct: 1   MASKDSKDQDPRIAGISSAIRIIPDFPKPGIMFQDITTLLLDTKAFKDTIDLFVERYRDQ 60

Query: 61  NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGA 120
           NISVVAG+EARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYG D +EMHVGA
Sbjct: 61  NISVVAGVEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGTDKIEMHVGA 120

Query: 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 180
           V+ GERAL++DDL+ATGGTL AAI+LLERVGV VVECACVIELPELKGRE+LG K LF+L
Sbjct: 121 VKPGERALVIDDLIATGGTLCAAIKLLERVGVTVVECACVIELPELKGREKLGGKSLFIL 180

Query: 181 V 181
           V
Sbjct: 181 V 181

Source: Trifolium repens

Species: Trifolium repens

Genus: Trifolium

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129882|ref|XP_002320694.1| predicted protein [Populus trichocarpa] gi|222861467|gb|EEE99009.1| predicted protein [Populus trichocarpa]

 Score =  322 bits (826), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 158/182 (86%), Positives = 172/182 (94%), Gaps = 1/182 (0%)

Query: 1   MASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK 60
           MA+AD + QDPRIA ISSAIRVIPDFPKPGIMFQDITTLLLDTKAF+DTIDLFVERY+DK
Sbjct: 73  MATAD-EQQDPRIARISSAIRVIPDFPKPGIMFQDITTLLLDTKAFKDTIDLFVERYRDK 131

Query: 61  NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGA 120
           NISVVAG+EARGFIFGPPIALAIGAKFVPMRKP KLPGEVISEEYSLEYG D MEMHVGA
Sbjct: 132 NISVVAGVEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGTDKMEMHVGA 191

Query: 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 180
           V+AGE AL++DDL+ATGGTL AA++LLERVGVHVVECACVIEL  LKGRERLG++PLFVL
Sbjct: 192 VEAGEHALVIDDLIATGGTLCAAVKLLERVGVHVVECACVIELLGLKGRERLGDRPLFVL 251

Query: 181 VS 182
           V+
Sbjct: 252 VN 253

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520489|gb|AFK48306.1| unknown [Medicago truncatula]

 Score =  317 bits (813), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 157/181 (86%), Positives = 170/181 (93%), Gaps = 2/181 (1%)

Query: 1   MASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK 60
           MAS D  +QDPRIA ISS+IR+IPDFPKPGIMFQDITTLLLDTKAF+DTIDLFVERY+D+
Sbjct: 1   MASKD--SQDPRIARISSSIRIIPDFPKPGIMFQDITTLLLDTKAFKDTIDLFVERYRDQ 58

Query: 61  NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGA 120
           NISVVAG+EARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYG D +EMHVGA
Sbjct: 59  NISVVAGVEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGTDKIEMHVGA 118

Query: 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 180
           VQ GERAL++DDL+ATGGTL AAI+LLERVGV VVECACVIELPELKGR +LG KPLFVL
Sbjct: 119 VQTGERALVIDDLIATGGTLCAAIKLLERVGVTVVECACVIELPELKGRAKLGGKPLFVL 178

Query: 181 V 181
           V
Sbjct: 179 V 179

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388503084|gb|AFK39608.1| unknown [Lotus japonicus]

 Score =  317 bits (812), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 156/175 (89%), Positives = 167/175 (95%)

Query: 8   AQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAG 67
           +QDPRIA ISSAIRVIPDFPKPGIMFQDITTLLLD KAF+DTIDLFVERY+D+NISVVAG
Sbjct: 3   SQDPRIATISSAIRVIPDFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYRDQNISVVAG 62

Query: 68  IEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERA 127
           +EARGFIFGPPIALAIGAKFVPMRKPKKLPG VISEEYSLEYG D +EMHVGAVQAGERA
Sbjct: 63  VEARGFIFGPPIALAIGAKFVPMRKPKKLPGPVISEEYSLEYGTDKIEMHVGAVQAGERA 122

Query: 128 LIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 182
           LI+DDL+ATGGTLSAAIRLLERV V VVECACV+ELPELKGRERLG+K LFVLV+
Sbjct: 123 LIIDDLIATGGTLSAAIRLLERVEVQVVECACVVELPELKGRERLGDKALFVLVN 177

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722933|ref|NP_001236749.1| uncharacterized protein LOC100305792 [Glycine max] gi|255626617|gb|ACU13653.1| unknown [Glycine max]

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 154/182 (84%), Positives = 171/182 (93%), Gaps = 1/182 (0%)

Query: 1   MASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK 60
           MAS + + QD R+A I+SAIRVIPDFPKPGI+FQDITTLLLDTKAF+DTIDLFVERY+D+
Sbjct: 53  MASKNSQ-QDTRLARIASAIRVIPDFPKPGILFQDITTLLLDTKAFKDTIDLFVERYRDQ 111

Query: 61  NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGA 120
           NI+VVAG+EARGFIFGPPIALAIGAKFVPMRKP KLPGEVISEEYSLEYG + MEMHVGA
Sbjct: 112 NINVVAGVEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGTNKMEMHVGA 171

Query: 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 180
           VQ GERALI+DDL+ATGGTL AAI+LLERVGVHVVECACVIELPELKGRERLG+K LFVL
Sbjct: 172 VQPGERALIIDDLIATGGTLGAAIKLLERVGVHVVECACVIELPELKGRERLGDKSLFVL 231

Query: 181 VS 182
           ++
Sbjct: 232 IN 233

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538084|ref|XP_002510107.1| Adenine phosphoribosyltransferase, putative [Ricinus communis] gi|223550808|gb|EEF52294.1| Adenine phosphoribosyltransferase, putative [Ricinus communis]

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 157/182 (86%), Positives = 169/182 (92%), Gaps = 2/182 (1%)

Query: 1   MASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK 60
           MA+ D K  D RI  ISS+IRVIPDFPKPGI+FQDITTLLLDTKAF+DTIDLFVERYK++
Sbjct: 72  MAAQDDK--DNRIERISSSIRVIPDFPKPGILFQDITTLLLDTKAFKDTIDLFVERYKER 129

Query: 61  NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGA 120
           +ISVVAGIEARGFIFGPPIALAIGAKFVPMRKP KLPGEV+SEEYSLEYG D MEMHVGA
Sbjct: 130 DISVVAGIEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVVSEEYSLEYGTDKMEMHVGA 189

Query: 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 180
           VQAGERAL++DDL+ATGGTL AAIRLLERVGV VVECACVIELPELKGRERLG+ PLFVL
Sbjct: 190 VQAGERALVIDDLIATGGTLCAAIRLLERVGVEVVECACVIELPELKGRERLGQTPLFVL 249

Query: 181 VS 182
           VS
Sbjct: 250 VS 251

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514471|ref|XP_003525929.1| PREDICTED: adenine phosphoribosyltransferase 1, chloroplastic-like [Glycine max]

 Score =  315 bits (806), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 153/181 (84%), Positives = 170/181 (93%), Gaps = 1/181 (0%)

Query: 1   MASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK 60
           MAS + + QD R+A I+SAIRVIPDFPKPGI+FQDITTLLLDTKAF+DT+DLFVERY+D+
Sbjct: 52  MASKNAQ-QDTRLARIASAIRVIPDFPKPGILFQDITTLLLDTKAFKDTVDLFVERYRDQ 110

Query: 61  NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGA 120
           NI+VVAG+EARGFIFGPPIALAIGAKFVPMRKP KLPGEVISEEYSLEYG D MEMHVGA
Sbjct: 111 NINVVAGVEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGTDKMEMHVGA 170

Query: 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 180
           VQ GERALI+DDL+ATGGTL AAI+LLERVGVHVVECACVIELPELKGR+RLG+K LFVL
Sbjct: 171 VQPGERALIIDDLIATGGTLGAAIKLLERVGVHVVECACVIELPELKGRDRLGDKSLFVL 230

Query: 181 V 181
           +
Sbjct: 231 I 231

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845694|ref|XP_002890728.1| hypothetical protein ARALYDRAFT_472949 [Arabidopsis lyrata subsp. lyrata] gi|297336570|gb|EFH66987.1| hypothetical protein ARALYDRAFT_472949 [Arabidopsis lyrata subsp. lyrata]

 Score =  314 bits (804), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 154/182 (84%), Positives = 171/182 (93%), Gaps = 2/182 (1%)

Query: 1   MASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK 60
           MA+ DV  QDPRIA I+S+IRVIPDFPKPGIMFQDITTLLLDT+AF+DTI LFV+RYKDK
Sbjct: 60  MATEDV--QDPRIAKIASSIRVIPDFPKPGIMFQDITTLLLDTEAFKDTIALFVDRYKDK 117

Query: 61  NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGA 120
            ISVVAG+EARGFIFGPPIALAIGAKFVPMRKPKKLPG+VISEEYSLEYG D +EMHVGA
Sbjct: 118 GISVVAGVEARGFIFGPPIALAIGAKFVPMRKPKKLPGKVISEEYSLEYGTDTIEMHVGA 177

Query: 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 180
           V+ GERA+I+DDL+ATGGTL+AAIRLLERVGV +VECACVIELPELKG+E+LGE PLFVL
Sbjct: 178 VEPGERAIIIDDLIATGGTLAAAIRLLERVGVKIVECACVIELPELKGKEKLGETPLFVL 237

Query: 181 VS 182
           VS
Sbjct: 238 VS 239

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18396344|ref|NP_564284.1| adenine phosphoribosyltransferase 1 [Arabidopsis thaliana] gi|38503396|sp|P31166.2|APT1_ARATH RecName: Full=Adenine phosphoribosyltransferase 1, chloroplastic; Short=APRT 1; Flags: Precursor gi|21536559|gb|AAM60891.1| adenine phosphoribosyltransferase 1, APRT [Arabidopsis thaliana] gi|332192710|gb|AEE30831.1| adenine phosphoribosyltransferase 1 [Arabidopsis thaliana]

 Score =  310 bits (795), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 152/181 (83%), Positives = 169/181 (93%), Gaps = 2/181 (1%)

Query: 1   MASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK 60
           MA+ DV  QDPRIA I+S+IRVIPDFPKPGIMFQDITTLLLDT+AF+DTI LFV+RYKDK
Sbjct: 61  MATEDV--QDPRIAKIASSIRVIPDFPKPGIMFQDITTLLLDTEAFKDTIALFVDRYKDK 118

Query: 61  NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGA 120
            ISVVAG+EARGFIFGPPIALAIGAKFVPMRKPKKLPG+VISEEYSLEYG D +EMHVGA
Sbjct: 119 GISVVAGVEARGFIFGPPIALAIGAKFVPMRKPKKLPGKVISEEYSLEYGTDTIEMHVGA 178

Query: 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 180
           V+ GERA+I+DDL+ATGGTL+AAIRLLERVGV +VECACVIELPELKG+E+LGE  LFVL
Sbjct: 179 VEPGERAIIIDDLIATGGTLAAAIRLLERVGVKIVECACVIELPELKGKEKLGETSLFVL 238

Query: 181 V 181
           V
Sbjct: 239 V 239

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	182
TAIR|locus:2127480	183	APT3 "adenine phosphoribosyl t	0.983	0.978	0.787	1.6e-72
TAIR|locus:2135550	182	APT4 "adenine phosphoribosyl t	0.983	0.983	0.773	1.6e-70
TAIR|locus:2147967	191	APT5 "adenine phosphoribosyltr	0.945	0.900	0.732	4.7e-64
TAIR|locus:2016309	192	APT2 "adenine phosphoribosyl t	0.945	0.895	0.732	4.2e-63
UNIPROTKB|P69503	183	apt "adenine phosphoribosyltra	0.873	0.868	0.537	4.5e-43
UNIPROTKB|Q9KT52	181	apt "Adenine phosphoribosyltra	0.862	0.867	0.515	5.2e-42
TIGR_CMR|VC_1053	181	VC_1053 "adenine phosphoribosy	0.862	0.867	0.515	5.2e-42
TIGR_CMR|SO_2012	181	SO_2012 "adenine phosphoribosy	0.862	0.867	0.496	2.6e-40
TIGR_CMR|CPS_3745	181	CPS_3745 "adenine phosphoribos	0.862	0.867	0.484	1.6e-38
TIGR_CMR|GSU_1526	171	GSU_1526 "adenine phosphoribos	0.917	0.976	0.473	1.6e-38

TAIR|locus:2127480 APT3 "adenine phosphoribosyl transferase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
 Identities = 141/179 (78%), Positives = 159/179 (88%)

Query:     3 SADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI 62
             S + + +DPRI GI + IRV+PDFPK GIMFQDITT+LLD KAF+DTIDLFVERY+DKNI
Sbjct:     2 SGNKEEEDPRIHGIKTKIRVVPDFPKKGIMFQDITTVLLDPKAFKDTIDLFVERYRDKNI 61

Query:    63 SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQ 122
             SVVAGIEARGF+FGPPIALAIGAKFVP+RKPKKLPGE I EEY LEYG D +EMH+GAV+
Sbjct:    62 SVVAGIEARGFLFGPPIALAIGAKFVPLRKPKKLPGETIFEEYELEYGNDRLEMHIGAVE 121

Query:   123 AGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 181
             AG+RAL+VDDL+ATGGTL AAI LLERVG  VVECACVIELPELKGR+RL  KPL +LV
Sbjct:   122 AGDRALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPELKGRQRLKGKPLCMLV 180

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA;ISS;IDA

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0006168 "adenine salvage" evidence=IEA;TAS

GO:0009116 "nucleoside metabolic process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2135550 APT4 "adenine phosphoribosyl transferase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
 Identities = 140/181 (77%), Positives = 158/181 (87%)

Query:     1 MASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK 60
             M+  +VK  DPRI GI + IRV+PDFPK GIMFQDITTLLLD KAF+DTIDLFVERY+D 
Sbjct:     1 MSENEVK--DPRIDGIKTKIRVVPDFPKKGIMFQDITTLLLDPKAFKDTIDLFVERYRDM 58

Query:    61 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGA 120
             NISVVAGIEARGFIFG PIALAIGAKFVP+RKPKKLPG++I EEY LEYG D +EMHV A
Sbjct:    59 NISVVAGIEARGFIFGSPIALAIGAKFVPLRKPKKLPGQIIFEEYELEYGSDRLEMHVEA 118

Query:   121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 180
             V +G+RAL+VDDL+ATGGTL AA+ LL+RVG  V+ECACVIELPELKGRERL  KPL+VL
Sbjct:   119 VDSGDRALVVDDLIATGGTLCAAMNLLKRVGAEVIECACVIELPELKGRERLEGKPLYVL 178

Query:   181 V 181
             V
Sbjct:   179 V 179

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0006168 "adenine salvage" evidence=IEA;ISS

GO:0009116 "nucleoside metabolic process" evidence=IEA

TAIR|locus:2147967 APT5 "adenine phosphoribosyltransferase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 126/172 (73%), Positives = 147/172 (85%)

Query:    10 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIE 69
             DPR+  IS+AIRV+P+FPK GIMFQDITTLLLD KAF+ TID+FV+RYKD  ISVVAG+E
Sbjct:    11 DPRLEAISAAIRVVPNFPKKGIMFQDITTLLLDHKAFKHTIDIFVDRYKDMQISVVAGVE 70

Query:    70 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALI 129
             ARGF+FGP IALAIGAKF+P+RKP KLPG+VISE Y LEYG D +EMHVGAV+  ER +I
Sbjct:    71 ARGFLFGPSIALAIGAKFIPLRKPGKLPGKVISESYELEYGHDRLEMHVGAVEPRERVII 130

Query:   130 VDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 181
             +DDLVATGGTLSAA+ LLE  G  VVECACVI LPE+KG+ +L  KPL+VLV
Sbjct:   131 IDDLVATGGTLSAAMSLLESQGAEVVECACVIGLPEVKGQHKLKGKPLYVLV 182

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0006168 "adenine salvage" evidence=IEA

GO:0009116 "nucleoside metabolic process" evidence=IEA

TAIR|locus:2016309 APT2 "adenine phosphoribosyl transferase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
 Identities = 126/172 (73%), Positives = 145/172 (84%)

Query:    10 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIE 69
             DPR+  IS AIRVIP FPK GIMFQDITTLLLD  AF+  +D+FV+RYK  NIS+VAG+E
Sbjct:    11 DPRLKAISDAIRVIPHFPKTGIMFQDITTLLLDPVAFKHVVDIFVDRYKHMNISLVAGVE 70

Query:    70 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALI 129
             ARGFIFGPPIALAIGAKFVP+RKP KLPG VISEEY LEYG+D +EM V AV++ ERALI
Sbjct:    71 ARGFIFGPPIALAIGAKFVPLRKPGKLPGRVISEEYELEYGRDCLEMSVEAVKSEERALI 130

Query:   130 VDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 181
             +DDLVATGGTLSA+I LLER G  VVECACV+ LP+ KG+ +L  KPL+VLV
Sbjct:   131 IDDLVATGGTLSASINLLERAGAEVVECACVVGLPKFKGQCKLKGKPLYVLV 182

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA;ISS;IDA

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0006168 "adenine salvage" evidence=IEA;TAS

GO:0009116 "nucleoside metabolic process" evidence=IEA

GO:0005829 "cytosol" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015114 "phosphate ion transmembrane transporter activity" evidence=ISS

UNIPROTKB|P69503 apt "adenine phosphoribosyltransferase" [Escherichia coli K-12 (taxid:83333)]

 Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 86/160 (53%), Positives = 120/160 (75%)

Query:    16 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIF 75
             + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+F
Sbjct:    11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLF 70

Query:    76 GPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVA 135
             G P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+A
Sbjct:    71 GAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLA 130

Query:   136 TGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 175
             TGGT+ A ++L+ R+G  V + A +I L +L G +RL EK
Sbjct:   131 TGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL-EK 169

GO:0009116 "nucleoside metabolic process" evidence=IEA

GO:0044209 "AMP salvage" evidence=IEA

GO:0042802 "identical protein binding" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006168 "adenine salvage" evidence=IEA;IDA

GO:0006166 "purine ribonucleoside salvage" evidence=IEA

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA;IDA

UNIPROTKB|Q9KT52 apt "Adenine phosphoribosyltransferase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
 Identities = 81/157 (51%), Positives = 116/157 (73%)

Query:    16 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIF 75
             I S+I+ IPD+PK GI+F+D+T+LL D +A++ TI L VE+YKD   + V G EARGF+F
Sbjct:     9 IKSSIKSIPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLF 68

Query:    76 GPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVA 135
             G P+AL +G  FVP+RKP KLP + +++ Y LEYG D +E+HV A++ G++ L+VDDL+A
Sbjct:    69 GAPLALELGVGFVPVRKPGKLPRQTVAQSYELEYGTDTLEIHVDAIKPGDKVLVVDDLLA 128

Query:   136 TGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 172
             TGGT+ A  +L+ ++G  V   A VI LPE+ G +RL
Sbjct:   129 TGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRL 165

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=ISS

GO:0006166 "purine ribonucleoside salvage" evidence=ISS

TIGR_CMR|VC_1053 VC_1053 "adenine phosphoribosyltransferase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
 Identities = 81/157 (51%), Positives = 116/157 (73%)

Query:    16 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIF 75
             I S+I+ IPD+PK GI+F+D+T+LL D +A++ TI L VE+YKD   + V G EARGF+F
Sbjct:     9 IKSSIKSIPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLF 68

Query:    76 GPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVA 135
             G P+AL +G  FVP+RKP KLP + +++ Y LEYG D +E+HV A++ G++ L+VDDL+A
Sbjct:    69 GAPLALELGVGFVPVRKPGKLPRQTVAQSYELEYGTDTLEIHVDAIKPGDKVLVVDDLLA 128

Query:   136 TGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 172
             TGGT+ A  +L+ ++G  V   A VI LPE+ G +RL
Sbjct:   129 TGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRL 165

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=ISS

GO:0006166 "purine ribonucleoside salvage" evidence=ISS

TIGR_CMR|SO_2012 SO_2012 "adenine phosphoribosyltransferase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 78/157 (49%), Positives = 112/157 (71%)

Query:    16 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIF 75
             I  +I+ IP++PK GI+F+D+T+LL +  A++ TIDL VE Y+ K  + + G EARGF+F
Sbjct:     9 IKQSIKTIPNYPKEGILFRDVTSLLENATAYKATIDLLVEHYRSKGFTKIVGTEARGFLF 68

Query:    76 GPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVA 135
             G P+AL +G  FVP+RKP KLP   IS+ Y LEYG D +E+H  A+ A ++ L+VDDL+A
Sbjct:    69 GAPLALGLGIGFVPVRKPGKLPRATISQSYELEYGHDSLEIHTDAITANDKVLVVDDLLA 128

Query:   136 TGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 172
             TGGT+ A ++L+ ++G  V + A VI LP+L G  RL
Sbjct:   129 TGGTIEATVKLIRQLGGEVQDAAFVISLPDLGGEARL 165

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=ISS

GO:0006166 "purine ribonucleoside salvage" evidence=ISS

TIGR_CMR|CPS_3745 CPS_3745 "adenine phosphoribosyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 76/157 (48%), Positives = 108/157 (68%)

Query:    18 SAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGP 77
             +AI  IPD+P  GIMF+D+T+LL D +AF+  ++L   +YK +  + + G EARGF+FG 
Sbjct:    11 NAIHTIPDYPVEGIMFRDVTSLLEDAEAFKLVMELLENKYKGRGFTKIVGTEARGFLFGA 70

Query:    78 PIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATG 137
             P+ALA+   F+P+RKP KLP    S+ Y LEYG+D++E+H  A+   +  LI+DDL+ATG
Sbjct:    71 PLALALNIGFIPVRKPGKLPRPTYSQAYQLEYGEDILEIHQDALTPEDNVLIIDDLLATG 130

Query:   138 GTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 174
             GT+ A  +L+ R+G  V E   VI LP+L G ERL E
Sbjct:   131 GTIEATTKLIRRLGAQVQEAGFVISLPDLGGEERLAE 167

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=ISS

GO:0006166 "purine ribonucleoside salvage" evidence=ISS

TIGR_CMR|GSU_1526 GSU_1526 "adenine phosphoribosyltransferase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 79/167 (47%), Positives = 112/167 (67%)

Query:    16 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIF 75
             + + IR +PDFPK GI+F+DITTLL D  +F+  +DL   RY  K IS V  +EARGF+ 
Sbjct:     4 LKNIIRDVPDFPKKGIIFKDITTLLADAPSFQRMVDLIAHRYVGKKISKVVVVEARGFVI 63

Query:    76 GPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVA 135
             G  +A  +GA  V +RKP KLP E  S+ Y LEYG D +E+H  A+  GER +I DD++A
Sbjct:    64 GAALAYKLGAGVVLVRKPGKLPSETYSKTYQLEYGSDTLEIHTDAIAKGERVIIADDILA 123

Query:   136 TGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 182
             TGGT++A + ++E +G  +VEC  + EL  L GR+RL E  ++ L++
Sbjct:   124 TGGTMAAVVDMVEALGGEIVECCFMAELEFLGGRKRLPEGKVYSLLT 170

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=ISS

GO:0006166 "purine ribonucleoside salvage" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A7MJV7	APT_CROS8	2, ., 4, ., 2, ., 7	0.5187	0.8791	0.8743	yes	no
A7FL92	APT_YERP3	2, ., 4, ., 2, ., 7	0.4918	0.9835	0.9572	yes	no
Q42563	APT2_ARATH	2, ., 4, ., 2, ., 7	0.7325	0.9450	0.8958	no	no
A0PZW4	APT_CLONN	2, ., 4, ., 2, ., 7	0.5238	0.9230	0.9767	yes	no
Q325C7	APT_SHIBS	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
Q8XD48	APT_ECO57	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	N/A	no
Q1C4P3	APT_YERPA	2, ., 4, ., 2, ., 7	0.4890	0.9780	0.9518	yes	no
A5UBP3	APT_HAEIE	2, ., 4, ., 2, ., 7	0.5660	0.8736	0.8833	yes	no
Q1CL33	APT_YERPN	2, ., 4, ., 2, ., 7	0.4890	0.9780	0.9518	yes	no
A8FX87	APT_SHESH	2, ., 4, ., 2, ., 7	0.5029	0.9175	0.9076	yes	no
Q66DQ2	APT_YERPS	2, ., 4, ., 2, ., 7	0.4890	0.9780	0.9518	yes	no
B6I0C1	APT_ECOSE	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
A8H2P5	APT_SHEPA	2, ., 4, ., 2, ., 7	0.5312	0.8791	0.8743	yes	no
A5UF74	APT_HAEIG	2, ., 4, ., 2, ., 7	0.5660	0.8736	0.8833	yes	no
A3QF54	APT_SHELP	2, ., 4, ., 2, ., 7	0.5294	0.9340	0.9392	yes	no
A1A8D5	APT_ECOK1	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
A1SX04	APT_PSYIN	2, ., 4, ., 2, ., 7	0.5549	0.9395	0.9447	yes	no
Q65U83	APT_MANSM	2, ., 4, ., 2, ., 7	0.5470	0.9120	0.9222	yes	no
P69503	APT_ECOLI	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	N/A	no
Q75FP0	APT_LEPIC	2, ., 4, ., 2, ., 7	0.5301	0.8956	0.9209	yes	no
P69504	APT_ECOL6	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
B2U4S2	APT_SHIB3	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
B1IZC5	APT_ECOLC	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
B1JHN6	APT_YERPY	2, ., 4, ., 2, ., 7	0.4918	0.9835	0.9572	yes	no
Q83M42	APT_SHIFL	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
A4SMN3	APT_AERS4	2, ., 4, ., 2, ., 7	0.5222	0.8626	0.8674	yes	no
Q4QJV7	APT_HAEI8	2, ., 4, ., 2, ., 7	0.5660	0.8736	0.8833	yes	no
Q0TKH2	APT_ECOL5	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
A9R0Q1	APT_YERPG	2, ., 4, ., 2, ., 7	0.4890	0.9780	0.9518	yes	no
Q8EXN2	APT_LEPIN	2, ., 4, ., 2, ., 7	0.5301	0.8956	0.9209	yes	no
P31166	APT1_ARATH	2, ., 4, ., 2, ., 7	0.8397	0.9835	0.7366	yes	no
B7LLQ1	APT_ESCF3	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
Q0T7B5	APT_SHIF8	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
A4TPB0	APT_YERPP	2, ., 4, ., 2, ., 7	0.4890	0.9780	0.9518	yes	no
Q3Z4T0	APT_SHISS	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
B7N922	APT_ECOLU	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
B5Z3X9	APT_ECO5E	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
P43856	APT_HAEIN	2, ., 4, ., 2, ., 7	0.5660	0.8736	0.8833	yes	no
Q32J49	APT_SHIDS	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
Q04WP5	APT_LEPBL	2, ., 4, ., 2, ., 7	0.5416	0.9065	0.9322	yes	no
B0TNZ8	APT_SHEHH	2, ., 4, ., 2, ., 7	0.5235	0.9285	0.9234	yes	no
A7ZXC7	APT_ECOHS	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
B1LJM6	APT_ECOSM	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
B1KNJ9	APT_SHEWM	2, ., 4, ., 2, ., 7	0.4970	0.9285	0.9337	yes	no
Q43199	APT1_WHEAT	2, ., 4, ., 2, ., 7	0.7885	0.9615	0.9668	N/A	no
Q04NG3	APT_LEPBJ	2, ., 4, ., 2, ., 7	0.5416	0.9065	0.9322	yes	no
A1S560	APT_SHEAM	2, ., 4, ., 2, ., 7	0.5312	0.8791	0.8839	yes	no
Q1RF67	APT_ECOUT	2, ., 4, ., 2, ., 7	0.5350	0.8626	0.8579	yes	no
B2K6Z1	APT_YERPB	2, ., 4, ., 2, ., 7	0.4918	0.9835	0.9572	yes	no
Q8ZC94	APT_YERPE	2, ., 4, ., 2, ., 7	0.4890	0.9780	0.9518	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.2	0.983
4th Layer	2.4.2.7	0.979

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	182
PLN02293	187	PLN02293, PLN02293, adenine phosphoribosyltransfer	1e-120
PRK02304	175	PRK02304, PRK02304, adenine phosphoribosyltransfer	9e-88
TIGR01090	169	TIGR01090, apt, adenine phosphoribosyltransferase	9e-77
COG0503	179	COG0503, Apt, Adenine/guanine phosphoribosyltransf	1e-60
PRK12560	187	PRK12560, PRK12560, adenine phosphoribosyltransfer	5e-33
cd06223	130	cd06223, PRTases_typeI, Phosphoribosyl transferase	5e-24
pfam00156	123	pfam00156, Pribosyltran, Phosphoribosyl transferas	5e-22
PRK09219	189	PRK09219, PRK09219, xanthine phosphoribosyltransfe	5e-10
TIGR01744	191	TIGR01744, XPRTase, xanthine phosphoribosyltransfe	3e-07
PRK07322	178	PRK07322, PRK07322, adenine phosphoribosyltransfer	2e-06
PRK00455	202	PRK00455, pyrE, orotate phosphoribosyltransferase;	4e-06
COG0461	201	COG0461, PyrE, Orotate phosphoribosyltransferase [	5e-06
TIGR01743	268	TIGR01743, purR_Bsub, pur operon repressor, Bacill	1e-05
PRK08558	238	PRK08558, PRK08558, adenine phosphoribosyltransfer	1e-05
TIGR01251	308	TIGR01251, ribP_PPkin, ribose-phosphate pyrophosph	1e-04
PRK00934	285	PRK00934, PRK00934, ribose-phosphate pyrophosphoki	2e-04
PRK07199	301	PRK07199, PRK07199, phosphoribosylpyrophosphate sy	2e-04
PRK09213	271	PRK09213, PRK09213, pur operon repressor; Provisio	2e-04
COG1040	225	COG1040, ComFC, Predicted amidophosphoribosyltrans	4e-04
TIGR01367	187	TIGR01367, pyrE_Therm, orotate phosphoribosyltrans	5e-04
COG0462	314	COG0462, PrsA, Phosphoribosylpyrophosphate synthet	6e-04
PRK00129	209	PRK00129, upp, uracil phosphoribosyltransferase; R	7e-04
TIGR00336	173	TIGR00336, pyrE, orotate phosphoribosyltransferase	8e-04
PRK06031	233	PRK06031, PRK06031, phosphoribosyltransferase; Pro	8e-04
PRK11595	227	PRK11595, PRK11595, DNA utilization protein GntX;	0.004

>gnl|CDD|177930 PLN02293, PLN02293, adenine phosphoribosyltransferase

 Score =  336 bits (864), Expect = e-120
 Identities = 146/180 (81%), Positives = 158/180 (87%)

Query: 2   ASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN 61
           A  +    DPR+ GISSAIRV+PDFPKPGIMFQDITTLLLD KAF+DTIDLFVERY+D  
Sbjct: 3   AMENGDQGDPRLQGISSAIRVVPDFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYRDMG 62

Query: 62  ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAV 121
           ISVVAGIEARGFIFGPPIALAIGAKFVP+RKP KLPGEVISEEY LEYG D +EMHVGAV
Sbjct: 63  ISVVAGIEARGFIFGPPIALAIGAKFVPLRKPGKLPGEVISEEYVLEYGTDCLEMHVGAV 122

Query: 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 181
           + GERAL++DDL+ATGGTL AAI LLER G  VVECACVIELPELKGRE+L  KPLFVLV
Sbjct: 123 EPGERALVIDDLIATGGTLCAAINLLERAGAEVVECACVIELPELKGREKLNGKPLFVLV 182

Length = 187

>gnl|CDD|235028 PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional

 Score =  254 bits (652), Expect = 9e-88
 Identities = 103/167 (61%), Positives = 125/167 (74%)

Query: 16  ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIF 75
           + S+IR IPDFPKPGI+F+DIT LL D +AFR+ ID  VERYKD +I  + GIEARGFIF
Sbjct: 6   LKSSIRTIPDFPKPGILFRDITPLLADPEAFREVIDALVERYKDADIDKIVGIEARGFIF 65

Query: 76  GPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVA 135
           G  +A  +G  FVP+RKP KLP E ISE Y LEYG D +E+H  A++ G+R LIVDDL+A
Sbjct: 66  GAALAYKLGIGFVPVRKPGKLPRETISESYELEYGTDTLEIHKDAIKPGDRVLIVDDLLA 125

Query: 136 TGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 182
           TGGTL AAI+LLER+G  VV  A VIELP+L GRE+L   P+  LV 
Sbjct: 126 TGGTLEAAIKLLERLGAEVVGAAFVIELPDLGGREKLEGYPVKSLVK 172

Length = 175

>gnl|CDD|233267 TIGR01090, apt, adenine phosphoribosyltransferase

 Score =  226 bits (578), Expect = 9e-77
 Identities = 93/165 (56%), Positives = 116/165 (70%), Gaps = 1/165 (0%)

Query: 18  SAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGP 77
            +IR IPDFPK GI+F+DIT LL + + FR  IDL VERYKD NI  + G EARGFIFG 
Sbjct: 3   QSIRSIPDFPKKGILFRDITPLLNNPELFRFLIDLLVERYKDANIDYIVGPEARGFIFGA 62

Query: 78  PIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATG 137
            +A  +G  FVP+RKP KLPGE IS  Y LEYGKD +E+H  A++ G+R LIVDDL+ATG
Sbjct: 63  ALAYKLGVGFVPVRKPGKLPGETISASYDLEYGKDQLEIHKDAIKPGQRVLIVDDLLATG 122

Query: 138 GTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK-PLFVLV 181
           GT  A   L+ ++G  VVE A +IEL +L GR +L    P+F L+
Sbjct: 123 GTAEATDELIRKLGGEVVEAAFLIELKDLNGRAKLEPNVPVFSLL 167

A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for This model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage. The trusted cutoff score is made high for this reason. Most proteins scoring between the trusted and noise cutoffs are likely to act as adenine phosphotransferase [Purines, pyrimidines, nucleosides, and nucleotides, Salvage of nucleosides and nucleotides]. Length = 169

>gnl|CDD|223577 COG0503, Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]

 Score =  185 bits (473), Expect = 1e-60
 Identities = 86/166 (51%), Positives = 105/166 (63%), Gaps = 2/166 (1%)

Query: 18  SAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGP 77
            +IR IPDFPK GI+F DIT LL D +     ID   ERYKD  I  +  IEARG     
Sbjct: 10  DSIREIPDFPKGGILFVDITLLLGDPELLAKLIDELAERYKDDGIDKIVTIEARGIPLAA 69

Query: 78  PIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATG 137
            +AL +G  FVP+RK  KLP E + E Y LEYG + +E+H  A++ G+R LIVDDL+ATG
Sbjct: 70  AVALELGVPFVPVRKKGKLPEESVVETYYLEYGSETLELHKDALKPGDRVLIVDDLLATG 129

Query: 138 GTLSAAIRLLERVGVHVVECACVIELPELKGRERL--GEKPLFVLV 181
           GT  A I LLE+ G  VV  A VIEL EL GR++L     P+F LV
Sbjct: 130 GTALALIELLEQAGAEVVGAAFVIELGELDGRKKLEDDGLPVFSLV 175

Length = 179

>gnl|CDD|183595 PRK12560, PRK12560, adenine phosphoribosyltransferase; Provisional

 Score =  116 bits (291), Expect = 5e-33
 Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 10/161 (6%)

Query: 20  IRVIPDFPKPGIM--FQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGP 77
            RV+        +  F D    L   K  ++T    + +Y DK+I  +   E +G     
Sbjct: 10  ARVVNSGKALTTVNEFTDQLPAL-RPKVLKETA-KEIIKYIDKDIDKIVTEEDKGAPLAT 67

Query: 78  PIALAIGAKFVPMRKPKKLPGEVISEEYS-LEYGKDVME--MHVGAVQAGERALIVDDLV 134
           P++L +     P+   +  P  +    Y+ +E G +  E  +++  ++ G+R  I+DD +
Sbjct: 68  PVSL-LS--GKPLAMARWYPYSLSELNYNVVEIGSEYFEGVVYLNGIEKGDRVAIIDDTL 124

Query: 135 ATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 175
           +TGGT+ A I+ +E  G  V +  CVIE  +  GR++L  +
Sbjct: 125 STGGTVIALIKAIENSGGIVSDVICVIEKTQNNGRKKLFTQ 165

Length = 187

>gnl|CDD|206754 cd06223, PRTases_typeI, Phosphoribosyl transferase (PRT)-type I domain

 Score = 90.9 bits (226), Expect = 5e-24
 Identities = 47/136 (34%), Positives = 66/136 (48%), Gaps = 10/136 (7%)

Query: 50  IDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSL 107
             L  E  ++      VV GI   G      +A A+G     +RK +K PG   SE Y L
Sbjct: 2   GRLLAEEIREDLLEPDVVVGILRGGLPLAAALARALGLPLAFIRKERKGPGRTPSEPYGL 61

Query: 108 EYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELK 167
           E       + +G    G+R L+VDD++ATGGTL AAI LL+  G  VV  A +++ PE  
Sbjct: 62  E-------LPLGGDVKGKRVLLVDDVIATGGTLLAAIELLKEAGAKVVGVAVLLDKPEGG 114

Query: 168 GR-ERLGEKPLFVLVS 182
            R       P++ L +
Sbjct: 115 ARELASPGDPVYSLFT 130

Phosphoribosyl transferase (PRT) domain. The type I PRTases are identified by a conserved PRPP binding motif which features two adjacent acidic residues surrounded by one or more hydrophobic residue. PRTases catalyze the displacement of the alpha-1'-pyrophosphate of 5-phosphoribosyl-alpha1-pyrpphosphate (PRPP) by a nitrogen-containing nucleophile. The reaction products are an alpha-1 substituted ribose-5'-phosphate and a free pyrophosphate (PP). PRPP, an activated form of ribose-5-phosphate, is a key metabolite connecting nucleotide synthesis and salvage pathways. The type I PRTase family includes a range of diverse phosphoribosyl transferase enzymes and regulatory proteins of the nucleotide synthesis and salvage pathways, including adenine phosphoribosyltransferase EC:2.4.2.7., hypoxanthine-guanine-xanthine phosphoribosyltransferase, hypoxanthine phosphoribosyltransferase EC:2.4.2.8., ribose-phosphate pyrophosphokinase EC:2.7.6.1., amidophosphoribosyltransferase EC:2.4.2.14., orotate phosphoribosyltransferase EC:2.4.2.10., uracil phosphoribosyltransferase EC:2.4.2.9., and xanthine-guanine phosphoribosyltransferase EC:2.4.2.22. Length = 130

>gnl|CDD|215757 pfam00156, Pribosyltran, Phosphoribosyl transferase domain

 Score = 85.5 bits (212), Expect = 5e-22
 Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 6/127 (4%)

Query: 37  TTLLLDTKAFRDTIDLFVERYKDKNIS--VVAGIEARGFIFGPPIALAIGAKFVPMRKPK 94
           + LLLD +  R+ I+   E+ +++ I   V+ GI   G      +A  +G   V +RK +
Sbjct: 1   SNLLLDPEELRELIEALAEKIREEGIDPDVIVGIARGGIPLATALARELGIPLVLVRKSR 60

Query: 95  KLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHV 154
             P    S   S       +   +  +  G+R LIVDD++ TGGTL AA+ LL++ G  V
Sbjct: 61  SYP----SSIKSRGGESVTLLSRLPELLKGKRVLIVDDVLDTGGTLRAAVELLKKAGAKV 116

Query: 155 VECACVI 161
           V  A ++
Sbjct: 117 VGVAVLV 123

This family includes a range of diverse phosphoribosyl transferase enzymes. This family includes: Adenine phosphoribosyltransferase EC:2.4.2.7. Hypoxanthine-guanine-xanthine phosphoribosyltransferase. Hypoxanthine phosphoribosyltransferase EC:2.4.2.8. Ribose-phosphate pyrophosphokinase i EC:2.7.6.1. Amidophosphoribosyltransferase EC:2.4.2.14. Orotate phosphoribosyltransferase EC:2.4.2.10. Uracil phosphoribosyltransferase EC:2.4.2.9. Xanthine-guanine phosphoribosyltransferase EC:2.4.2.22. In Arabidopsis, At the very N-terminus of this domain is the P-Loop NTPase domain. Length = 123

>gnl|CDD|181705 PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated

 Score = 55.6 bits (135), Expect = 5e-10
 Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 18/134 (13%)

Query: 53  FVERYKDKNISVVAGIEARGFIFGPPIALAI--GAKF-VPM-----RKPKKLPGEV-ISE 103
           F  R+KD+ I+ +  IEA G      IA A+       VP+     +K   L  +V  + 
Sbjct: 42  FARRFKDEGITKILTIEASG------IAPAVMAALALGVPVVFAKKKKSLTLTDDVYTAT 95

Query: 104 EYSLEYGKDVMEMHVGA--VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI 161
            YS         + V    +  G+R LI+DD +A G      I ++E+ G  V     VI
Sbjct: 96  VYSFTKQVTS-TVSVSKKFLSEGDRVLIIDDFLANGQAALGLIDIIEQAGAKVAGIGIVI 154

Query: 162 ELPELKGRERLGEK 175
           E     GR+ L EK
Sbjct: 155 EKSFQDGRKLLEEK 168

Length = 189

>gnl|CDD|130805 TIGR01744, XPRTase, xanthine phosphoribosyltransferase

 Score = 48.3 bits (115), Expect = 3e-07
 Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 18/145 (12%)

Query: 41  LDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAI--GAKF-VPM-----RK 92
           +D K  ++  + F  R+ D  I+ +  IEA G      IA AI  G K  VP+     +K
Sbjct: 30  IDPKLMQEVGEEFARRFADDGITKIVTIEASG------IAPAIMTGLKLGVPVVFARKKK 83

Query: 93  PKKLPGEVISEE-YSLEYGKDVMEMHVGAVQAGE--RALIVDDLVATGGTLSAAIRLLER 149
           P  L   +++   +S         + V      +  R LI+DD +A G      + + ++
Sbjct: 84  PLTLTDNLLTASVHSFTKQTTS-TVAVSGEFLSDQDRVLIIDDFLANGQAAHGLVDIAKQ 142

Query: 150 VGVHVVECACVIELPELKGRERLGE 174
            G  +     VIE     GR+ L E
Sbjct: 143 AGAKIAGIGIVIEKSFQNGRQELVE 167

This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen [Purines, pyrimidines, nucleosides, and nucleotides, Salvage of nucleosides and nucleotides]. Length = 191

>gnl|CDD|180928 PRK07322, PRK07322, adenine phosphoribosyltransferase; Provisional

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 7/60 (11%)

Query: 124 GERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER-----LGEKPLF 178
           G+R  IVDD+V+TGGTL+A  RL+ER G  VV  A +    E     R     L   PLF
Sbjct: 120 GKRVAIVDDVVSTGGTLTALERLVERAGGQVVAKAAI--FAEGDASNRLDVIYLAHLPLF 177

Length = 178

>gnl|CDD|234771 PRK00455, pyrE, orotate phosphoribosyltransferase; Validated

 Score = 44.8 bits (107), Expect = 4e-06
 Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 18/130 (13%)

Query: 35  DITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRK 92
           D   LL   +A         E  KD      VVAG    G      +A A+    + +RK
Sbjct: 36  DCRKLLSYPEALALLGRFLAEAIKDSGIEFDVVAGPATGGIPLAAAVARALDLPAIFVRK 95

Query: 93  PKKLPGEVISEEYSLEYGKD-VMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG 151
             K            ++G+   +E   G    G+R L+V+D++ TGG++  A+  +   G
Sbjct: 96  EAK------------DHGEGGQIE---GRRLFGKRVLVVEDVITTGGSVLEAVEAIRAAG 140

Query: 152 VHVVECACVI 161
             VV  A ++
Sbjct: 141 AEVVGVAVIV 150

Length = 202

>gnl|CDD|223537 COG0461, PyrE, Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]

 Score = 44.6 bits (106), Expect = 5e-06
 Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 18/146 (12%)

Query: 33  FQDITTLLLDTKAFRDTIDLFVERYKD-KNISVVAGIEARGFIFGPPIA--LAIGAKFVP 89
           + D+   L   +  +       E  K+     VVAG    G       A  LA       
Sbjct: 32  YVDLRLFLTGPELLQLIAFALAEIIKEALEFDVVAGPALGGIPLAAATALALAHLPPMAY 91

Query: 90  MRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLER 149
           +RK  K            ++G     +  G    GE+ ++V+D++ TGG++  A+  L  
Sbjct: 92  VRKEAK------------DHGT--GGLIEGGEVKGEKVVVVEDVITTGGSILEAVEALRE 137

Query: 150 VGVHVVECACVIELPELKGRERLGEK 175
            G  VV  A +++  +   +E L E 
Sbjct: 138 AGAEVVGVAVIVDR-QSGAKEVLKEY 162

Length = 201

>gnl|CDD|130804 TIGR01743, purR_Bsub, pur operon repressor, Bacillus subtilis type

 Score = 44.4 bits (105), Expect = 1e-05
 Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 3/133 (2%)

Query: 52  LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP-GEVISEEYSLEYG 110
           +    + ++ I  V  +  +G      +A  +    V +RK  K+  G  +S  Y     
Sbjct: 119 ILASVFAEREIDAVMTVATKGIPLAYAVASVLNVPLVIVRKDSKVTEGSTVSINYVSGSS 178

Query: 111 KDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 168
             +  M +   +++ G + LI+DD +  GGT++  I LL+     V     +I+   +  
Sbjct: 179 NRIQTMSLAKRSLKTGSKVLIIDDFMKAGGTINGMINLLDEFDAEVAGIGVLIDNEGVDE 238

Query: 169 RERLGEKPLFVLV 181
           +       L  L 
Sbjct: 239 KLVDDYMSLLTLS 251

This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis, Regulatory functions, DNA interactions]. Length = 268

>gnl|CDD|181466 PRK08558, PRK08558, adenine phosphoribosyltransferase; Provisional

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 3/123 (2%)

Query: 55  ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEY-SLEYGKDV 113
           ER+    + VV      G      IA   GA  V  +K K+   E   EEY  L  G +V
Sbjct: 105 ERFMGLRVDVVLTAATDGIPLAVAIASYFGADLVYAKKSKETGVEKFYEEYQRLASGIEV 164

Query: 114 -MEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 172
            + +   A++ G+R LIVDD++ +G T  A + L  + G  VV    +I + E  G +R 
Sbjct: 165 TLYLPASALKKGDRVLIVDDIIRSGETQRALLDLARQAGADVVGVFFLIAVGE-VGIDRA 223

Query: 173 GEK 175
            E+
Sbjct: 224 REE 226

Length = 238

>gnl|CDD|130318 TIGR01251, ribP_PPkin, ribose-phosphate pyrophosphokinase

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 123 AGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV 160
            G+  +IVDD++ TGGT++ A  +L+  G   V  A  
Sbjct: 209 EGKDVVIVDDIIDTGGTIAKAAEILKSAGAKRVIAAAT 246

Alternate name: phosphoribosylpyrophosphate synthetase In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]. Length = 308

>gnl|CDD|234868 PRK00934, PRK00934, ribose-phosphate pyrophosphokinase; Provisional

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 18/37 (48%), Positives = 27/37 (72%)

Query: 124 GERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV 160
           G+  LIVDD+++TGGT++ AI++L+  G   V  ACV
Sbjct: 204 GKDVLIVDDIISTGGTMATAIKILKEQGAKKVYVACV 240

Length = 285

>gnl|CDD|235960 PRK07199, PRK07199, phosphoribosylpyrophosphate synthetase; Provisional

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 119 GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV 160
            A  AG   ++VDD+V+TG TL  A R L   G    +C  V
Sbjct: 206 AAPWAGRTPVLVDDIVSTGRTLIEAARQLRAAGAASPDCVVV 247

Length = 301

>gnl|CDD|236414 PRK09213, PRK09213, pur operon repressor; Provisional

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 13/119 (10%)

Query: 52  LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKF--VPM----RKPKKLPGEVISEEY 105
           +    + DK I  V  +E +G     P+A A+ A +  VP     R  K   G  +S  Y
Sbjct: 121 IIASAFADKKIDAVMTVETKGI----PLAYAV-ANYLNVPFVIVRRDSKVTEGSTVSINY 175

Query: 106 SLEYGKDV--MEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIE 162
                K +  M +   +++ G R LIVDD +  GGT++  I LL+     VV    ++E
Sbjct: 176 VSGSSKRIETMSLSKRSLKEGSRVLIVDDFMKAGGTINGMISLLKEFDAEVVGIGVLVE 234

Length = 271

>gnl|CDD|223970 COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]

 Score = 39.3 bits (92), Expect = 4e-04
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 119 GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV 160
             ++  +  L+VDD+  TG TL  A +LL   G   V    +
Sbjct: 179 KGIEEPKNVLLVDDVYTTGATLKEAAKLLREAGAKRVFVLTL 220

Length = 225

>gnl|CDD|233377 TIGR01367, pyrE_Therm, orotate phosphoribosyltransferase, Thermus family

 Score = 38.6 bits (90), Expect = 5e-04
 Identities = 21/43 (48%), Positives = 30/43 (69%)

Query: 120 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIE 162
           AV+ GE+ + V+D+V TGG+L  AIR +E  G  VV  AC+I+
Sbjct: 101 AVKPGEKFVAVEDVVTTGGSLLEAIRAIEGQGGQVVGLACIID 143

This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]. Length = 187

>gnl|CDD|223538 COG0462, PrsA, Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]

 Score = 39.1 bits (92), Expect = 6e-04
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 113 VMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV 160
            +   +G V  G+  +IVDD++ TGGT++ A + L+  G   V  A  
Sbjct: 204 EVMNLIGDV-EGKDVVIVDDIIDTGGTIAKAAKALKERGAKKVYAAAT 250

Length = 314

>gnl|CDD|234653 PRK00129, upp, uracil phosphoribosyltransferase; Reviewed

 Score = 38.5 bits (91), Expect = 7e-04
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)

Query: 123 AGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 175
                ++VD ++ATGG+  AAI LL++ G   ++  C++  PE  G + L E 
Sbjct: 123 DERTVIVVDPMLATGGSAIAAIDLLKKRGAKNIKVLCLVAAPE--GIKALEEA 173

Length = 209

>gnl|CDD|129436 TIGR00336, pyrE, orotate phosphoribosyltransferase

 Score = 38.2 bits (89), Expect = 8e-04
 Identities = 23/117 (19%), Positives = 52/117 (44%), Gaps = 13/117 (11%)

Query: 74  IFGP-----PIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERAL 128
           I GP     PIA A+  K   + KP        + + + ++G+       G +  G++ +
Sbjct: 58  IAGPALGGIPIATAVSVK---LAKPGGDIPLCFNRKEAKDHGEG--GNIEGELLEGDKVV 112

Query: 129 IVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE---RLGEKPLFVLVS 182
           +V+D++ TG ++  A+ +++  G  V      ++  E    +   +    P+  L++
Sbjct: 113 VVEDVITTGTSILEAVEIIQAAGGQVAGVIIAVDRQERSAGQEFEKEYGLPVISLIT 169

Orotate phosphoribosyltransferase (OPRTase) is involved in the biosynthesis of pyrimidine nucleotides. Alpha-D-ribosyldiphosphate 5-phosphate (PRPP) and orotate are utilized to form pyrophosphate and orotidine 5'-monophosphate (OMP) in the presence of divalent cations, preferably Mg2+. In a number of eukaryotes, this protein is fused to a domain that catalyses the reaction (EC 4.1.1.23). The combined activity of EC 2.4.2.10 and EC 4.1.1.23 is termed uridine 5'-monophosphate synthase. The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]. Length = 173

>gnl|CDD|235678 PRK06031, PRK06031, phosphoribosyltransferase; Provisional

 Score = 38.2 bits (89), Expect = 8e-04
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 123 AGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155
            G R  ++DD++++G ++ A +RLL   G+   
Sbjct: 153 EGRRVALIDDVISSGASIVAGLRLLAACGIEPA 185

Length = 233

>gnl|CDD|183221 PRK11595, PRK11595, DNA utilization protein GntX; Provisional

 Score = 36.2 bits (84), Expect = 0.004
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 124 GERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV 160
           G+   IVDD+V TG T++   +LL R G   V+  C+
Sbjct: 187 GQHMAIVDDVVTTGSTVAEIAQLLLRNGAASVQVWCL 223

Length = 227

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	182
PLN02293	187	adenine phosphoribosyltransferase	100.0
KOG1712	183	consensus Adenine phosphoribosyl transferases [Nuc	100.0
PRK02304	175	adenine phosphoribosyltransferase; Provisional	100.0
TIGR01090	169	apt adenine phosphoribosyltransferase. A phylogene	99.98
COG0503	179	Apt Adenine/guanine phosphoribosyltransferases and	99.97
PRK12560	187	adenine phosphoribosyltransferase; Provisional	99.96
TIGR01744	191	XPRTase xanthine phosphoribosyltransferase. This m	99.96
PRK09219	189	xanthine phosphoribosyltransferase; Validated	99.96
TIGR01743	268	purR_Bsub pur operon repressor, Bacillus subtilis	99.96
PRK09213	271	pur operon repressor; Provisional	99.95
PRK13810	187	orotate phosphoribosyltransferase; Provisional	99.94
PRK08558	238	adenine phosphoribosyltransferase; Provisional	99.94
PRK13809	206	orotate phosphoribosyltransferase; Provisional	99.93
PRK07322	178	adenine phosphoribosyltransferase; Provisional	99.93
PRK13812	176	orotate phosphoribosyltransferase; Provisional	99.92
TIGR00336	173	pyrE orotate phosphoribosyltransferase. The conser	99.92
PRK13811	170	orotate phosphoribosyltransferase; Provisional	99.92
TIGR01367	187	pyrE_Therm orotate phosphoribosyltransferase, Ther	99.91
PRK02277	200	orotate phosphoribosyltransferase-like protein; Pr	99.91
PRK05500	477	bifunctional orotidine 5'-phosphate decarboxylase/	99.9
PRK00455	202	pyrE orotate phosphoribosyltransferase; Validated	99.9
PRK06031	233	phosphoribosyltransferase; Provisional	99.88
COG0461	201	PyrE Orotate phosphoribosyltransferase [Nucleotide	99.88
COG0856	203	Orotate phosphoribosyltransferase homologs [Nucleo	99.86
PF00156	125	Pribosyltran: Phosphoribosyl transferase domain; I	99.85
PRK09162	181	hypoxanthine-guanine phosphoribosyltransferase; Pr	99.72
PRK07199	301	phosphoribosylpyrophosphate synthetase; Provisiona	99.72
TIGR01203	166	HGPRTase hypoxanthine phosphoribosyltransferase. S	99.71
PLN02238	189	hypoxanthine phosphoribosyltransferase	99.71
PRK00934	285	ribose-phosphate pyrophosphokinase; Provisional	99.69
PRK02269	320	ribose-phosphate pyrophosphokinase; Provisional	99.68
PRK09177	156	xanthine-guanine phosphoribosyltransferase; Valida	99.68
PRK08525	445	amidophosphoribosyltransferase; Provisional	99.67
PRK15423	178	hypoxanthine phosphoribosyltransferase; Provisiona	99.67
COG1040	225	ComFC Predicted amidophosphoribosyltransferases [G	99.66
PRK04923	319	ribose-phosphate pyrophosphokinase; Provisional	99.65
TIGR00201	190	comF comF family protein. This protein is found in	99.64
COG0462	314	PrsA Phosphoribosylpyrophosphate synthetase [Nucle	99.64
PRK01259	309	ribose-phosphate pyrophosphokinase; Provisional	99.64
PRK02458	323	ribose-phosphate pyrophosphokinase; Provisional	99.63
PRK05205	176	bifunctional pyrimidine regulatory protein PyrR ur	99.62
PTZ00271	211	hypoxanthine-guanine phosphoribosyltransferase; Pr	99.62
PRK00553	332	ribose-phosphate pyrophosphokinase; Provisional	99.61
PRK03092	304	ribose-phosphate pyrophosphokinase; Provisional	99.61
PRK06827	382	phosphoribosylpyrophosphate synthetase; Provisiona	99.58
COG0634	178	Hpt Hypoxanthine-guanine phosphoribosyltransferase	99.58
TIGR01251	308	ribP_PPkin ribose-phosphate pyrophosphokinase. In	99.58
PRK05793	469	amidophosphoribosyltransferase; Provisional	99.57
PTZ00149	241	hypoxanthine phosphoribosyltransferase; Provisiona	99.56
PRK07349	500	amidophosphoribosyltransferase; Provisional	99.56
PRK11595	227	DNA utilization protein GntX; Provisional	99.55
PLN02369	302	ribose-phosphate pyrophosphokinase	99.54
COG2236	192	Predicted phosphoribosyltransferases [General func	99.54
PRK02812	330	ribose-phosphate pyrophosphokinase; Provisional	99.54
PRK09123	479	amidophosphoribosyltransferase; Provisional	99.53
PLN02297	326	ribose-phosphate pyrophosphokinase	99.53
PTZ00145	439	phosphoribosylpyrophosphate synthetase; Provisiona	99.53
PLN02440	479	amidophosphoribosyltransferase	99.52
PF14572	184	Pribosyl_synth: Phosphoribosyl synthetase-associat	99.51
PRK06781	471	amidophosphoribosyltransferase; Provisional	99.5
TIGR01134	442	purF amidophosphoribosyltransferase. Alternate nam	99.5
PRK07272	484	amidophosphoribosyltransferase; Provisional	99.49
PRK09246	501	amidophosphoribosyltransferase; Provisional	99.49
PRK07847	510	amidophosphoribosyltransferase; Provisional	99.49
PRK06388	474	amidophosphoribosyltransferase; Provisional	99.49
PRK08341	442	amidophosphoribosyltransferase; Provisional	99.48
PRK07631	475	amidophosphoribosyltransferase; Provisional	99.46
COG0034	470	PurF Glutamine phosphoribosylpyrophosphate amidotr	99.39
KOG1448	316	consensus Ribose-phosphate pyrophosphokinase [Nucl	99.34
PRK00129	209	upp uracil phosphoribosyltransferase; Reviewed	99.17
COG2065	179	PyrR Pyrimidine operon attenuation protein/uracil	99.12
TIGR01091	207	upp uracil phosphoribosyltransferase. that include	99.09
COG1926	220	Predicted phosphoribosyltransferases [General func	99.08
KOG3367	216	consensus Hypoxanthine-guanine phosphoribosyltrans	99.02
KOG0572	474	consensus Glutamine phosphoribosylpyrophosphate am	98.99
PF15609	191	PRTase_2: Phosphoribosyl transferase	98.77
PLN02541	244	uracil phosphoribosyltransferase	98.13
KOG1503	354	consensus Phosphoribosylpyrophosphate synthetase-a	97.92
COG0035	210	Upp Uracil phosphoribosyltransferase [Nucleotide t	97.84
PF14681	207	UPRTase: Uracil phosphoribosyltransferase; PDB: 1V	97.79
PF15610	274	PRTase_3: PRTase ComF-like	96.15
PF13793	116	Pribosyltran_N: N-terminal domain of ribose phosph	93.57
KOG1017	267	consensus Predicted uracil phosphoribosyltransfera	93.56
KOG1377	261	consensus Uridine 5'- monophosphate synthase/orota	91.92
PRK02812	330	ribose-phosphate pyrophosphokinase; Provisional	90.0
PTZ00145	439	phosphoribosylpyrophosphate synthetase; Provisiona	89.9
PRK00553	332	ribose-phosphate pyrophosphokinase; Provisional	87.89
PLN02369	302	ribose-phosphate pyrophosphokinase	87.57
PRK00934	285	ribose-phosphate pyrophosphokinase; Provisional	87.56
PRK02269	320	ribose-phosphate pyrophosphokinase; Provisional	87.4
PRK07199	301	phosphoribosylpyrophosphate synthetase; Provisiona	86.92
PRK01259	309	ribose-phosphate pyrophosphokinase; Provisional	85.98
PRK03092	304	ribose-phosphate pyrophosphokinase; Provisional	85.73
PRK04923	319	ribose-phosphate pyrophosphokinase; Provisional	85.67
TIGR01251	308	ribP_PPkin ribose-phosphate pyrophosphokinase. In	84.9
PRK02458	323	ribose-phosphate pyrophosphokinase; Provisional	83.82
COG0462	314	PrsA Phosphoribosylpyrophosphate synthetase [Nucle	82.15

>PLN02293 adenine phosphoribosyltransferase

Probab=100.00  E-value=3.1e-35  Score=228.43  Aligned_cols=178  Identities=81%  Similarity=1.296  Sum_probs=163.8

Q ss_pred             cccccchHHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhC
Q 030139            5 DVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIG   84 (182)
Q Consensus         5 ~~~~~~~~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~   84 (182)
                      -.++-|++.++|.+.+||.|+||.+|+.|+|++.++.+|+.++.++..|++.+.+.++|+|+|++.+|+++|..+|..+|
T Consensus         6 ~~~~~~~~~~~l~~~i~~~~~~p~~gi~f~D~~~l~~~p~~~~~~~~~l~~~~~~~~~d~Ivg~e~~Gi~lA~~lA~~Lg   85 (187)
T PLN02293          6 NGDQGDPRLQGISSAIRVVPDFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYRDMGISVVAGIEARGFIFGPPIALAIG   85 (187)
T ss_pred             cccCCChhHHHHHHhCccCCCCCcCCcEEEECHHHhhCHHHHHHHHHHHHHHHhhcCCCEEEEeCCCchHHHHHHHHHHC
Confidence            45778999999999999999999999999999999999999999999999999877899999999999999999999999


Q ss_pred             CCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139           85 AKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus        85 vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                      +|++++||.++.+++.....|..+++++.+++..+...+|++|+||||+++||+|+.+++++|+++|+++++++++++.+
T Consensus        86 ~p~v~~rK~~k~~~~~~~~~~~~~~g~~~l~l~~~~i~~G~rVlIVDDvitTG~T~~~~~~~l~~~Ga~~v~~~~~~~~~  165 (187)
T PLN02293         86 AKFVPLRKPGKLPGEVISEEYVLEYGTDCLEMHVGAVEPGERALVIDDLIATGGTLCAAINLLERAGAEVVECACVIELP  165 (187)
T ss_pred             CCEEEEEecCCCCCceEEEEEeccCCceEEEEEcCccCCCCEEEEEeccccchHHHHHHHHHHHHCCCEEEEEEEEEEcC
Confidence            99999999888777776666766677766777666667899999999999999999999999999999999999999999


Q ss_pred             CcccccccCCCCcccccC
Q 030139          165 ELKGRERLGEKPLFVLVS  182 (182)
Q Consensus       165 ~~~~~~~l~~~~~~~l~~  182 (182)
                      +.++++++.++|+++|++
T Consensus       166 ~~~g~~~l~~~~~~sl~~  183 (187)
T PLN02293        166 ELKGREKLNGKPLFVLVE  183 (187)
T ss_pred             CccHHHHhcCCceEEEEe
Confidence            889999999999999873

>KOG1712 consensus Adenine phosphoribosyl transferases [Nucleotide transport and metabolism]

Probab=100.00  E-value=6.6e-36  Score=221.24  Aligned_cols=173  Identities=69%  Similarity=1.172  Sum_probs=167.0

Q ss_pred             chHHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCC
Q 030139           10 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAK   86 (182)
Q Consensus        10 ~~~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp   86 (182)
                      +++++.+++.||..|+||++|++|.|+..++.||..++.++..+.+++++   .++|+|+|+++|||.++..+|.++|++
T Consensus         5 d~~~~~ik~~ir~~pdFPk~GI~F~Di~pll~dP~af~~lidlf~~h~~~~~~~~Id~iaGlEaRGFLFGP~iAlalG~~   84 (183)
T KOG1712|consen    5 DPRLKYIKTAIRVVPDFPKKGIMFQDITPLLLDPKAFKKLIDLFVDHYRETFEMKIDVIAGLEARGFLFGPSIALALGAG   84 (183)
T ss_pred             cHHHHHHHHhheeCCCCCCCceehhhhhhhhcCHHHHHHHHHHHHHHHHHHhcCcceEEEeeeecceecCcHHHHHhCCC
Confidence            67899999999999999999999999999999999999999999998887   569999999999999999999999999


Q ss_pred             eEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCc
Q 030139           87 FVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPEL  166 (182)
Q Consensus        87 ~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~  166 (182)
                      ++.+||..|.|++..+.+|..+++...+++..++...|+||+||||++.||+|+.++.+++.+.|++++.++|+++..+-
T Consensus        85 fVPiRK~gKLPG~~i~~~Y~lEYg~d~~Emq~~Ai~~g~rvvvVDDllATGGTl~AA~~Ll~r~ga~vvE~~~vieL~~L  164 (183)
T KOG1712|consen   85 FVPIRKPGKLPGEVISESYELEYGEDRFEMQKGAIKPGQRVVVVDDLLATGGTLAAATELLERVGAEVVECACVIELPEL  164 (183)
T ss_pred             eeecccCCCCCCceeEEEEeeecCccceeeeccccCCCCeEEEEechhhcCccHHHHHHHHHHhccEEEEEEEEEEcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCcccccC
Q 030139          167 KGRERLGEKPLFVLVS  182 (182)
Q Consensus       167 ~~~~~l~~~~~~~l~~  182 (182)
                      +|+++|++.|+++|++
T Consensus       165 kGr~kL~~~pl~~Ll~  180 (183)
T KOG1712|consen  165 KGREKLKGKPLFSLLE  180 (183)
T ss_pred             CCccccCCCccEEEee
Confidence            9999999999999874

>PRK02304 adenine phosphoribosyltransferase; Provisional

Probab=100.00  E-value=3.3e-32  Score=209.69  Aligned_cols=169  Identities=61%  Similarity=1.021  Sum_probs=149.2

Q ss_pred             HHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeec
Q 030139           13 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRK   92 (182)
Q Consensus        13 ~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk   92 (182)
                      +++|.+..|.+|.||.|++.|.|+++++.+|+.++.+++.+++.+.+.++|+|+|++.+|+++|..+|..+++|+..+||
T Consensus         3 ~~~l~~~~~~~~~~~~~~~~~~d~~~l~~~p~~~~~~~~~la~~~~~~~~d~Ivgv~~~Gi~~a~~la~~l~~p~~~~rk   82 (175)
T PRK02304          3 LEDLKSSIRTIPDFPKPGILFRDITPLLADPEAFREVIDALVERYKDADIDKIVGIEARGFIFGAALAYKLGIGFVPVRK   82 (175)
T ss_pred             HHHHHHhhccCCCCCCCCcEEEeChhHhcCHHHHHHHHHHHHHHhccCCCCEEEEEccchHHHHHHHHHHhCCCEEEEEc
Confidence            68999999999999999999999999999999999999999999987789999999999999999999999999999888


Q ss_pred             cCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCccccccc
Q 030139           93 PKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL  172 (182)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l  172 (182)
                      .++.++...+..|..+++++.+.+..+...+|++||||||++|||+|+.++++.|+++|+++++++|++++.+.+|.+++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~g~~VLIVDDivtTG~Tl~~~~~~l~~~Ga~~v~v~vl~~~~~~~g~~~l  162 (175)
T PRK02304         83 PGKLPRETISESYELEYGTDTLEIHKDAIKPGDRVLIVDDLLATGGTLEAAIKLLERLGAEVVGAAFVIELPDLGGREKL  162 (175)
T ss_pred             CCCCCCceEeEEEecccCceEEEEchhhcCCCCEEEEEeCCccccHHHHHHHHHHHHcCCEEEEEEEEEEcccccchhhc
Confidence            76655444444554444556666654456899999999999999999999999999999999999999999876788888


Q ss_pred             CCCCccccc
Q 030139          173 GEKPLFVLV  181 (182)
Q Consensus       173 ~~~~~~~l~  181 (182)
                      .++|++||+
T Consensus       163 ~~~~~~sl~  171 (175)
T PRK02304        163 EGYPVKSLV  171 (175)
T ss_pred             CCCceEEEE
Confidence            889999986

>TIGR01090 apt adenine phosphoribosyltransferase

Probab=99.98  E-value=5.3e-31  Score=201.97  Aligned_cols=166  Identities=56%  Similarity=0.942  Sum_probs=145.0

Q ss_pred             HhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCC
Q 030139           16 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKK   95 (182)
Q Consensus        16 l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~   95 (182)
                      |+++++.+|+||.||+.|+|++.++.+|+.++.+++.|++.+.+.++|+|+|++.+|+++|..+|..+++|+..++|.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~d~~~~l~~p~~~~~~~~~la~~i~~~~~d~ivgi~~~G~~~A~~la~~L~~~~~~i~k~~~   80 (169)
T TIGR01090         1 LKQSIRSIPDFPKKGILFRDITPLLNNPELFRFLIDLLVERYKDANIDYIVGPEARGFIFGAALAYKLGVGFVPVRKPGK   80 (169)
T ss_pred             ChhhcccCCCCCCCCceeEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEeehhccHHHHHHHHHHHCCCEEEEEeCCC
Confidence            56788999999999999999999999999999999999999987788999999999999999999999999988887766


Q ss_pred             CCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC-
Q 030139           96 LPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE-  174 (182)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~-  174 (182)
                      .++...+..++.+++++.+++......+|++||||||++|||+|+.++++.|+++|++++.+++++++.+.+|.+.+.+ 
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDIitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~g~~~i~~~  160 (169)
T TIGR01090        81 LPGETISASYDLEYGKDQLEIHKDAIKPGQRVLIVDDLLATGGTAEATDELIRKLGGEVVEAAFLIELKDLNGRAKLEPN  160 (169)
T ss_pred             CCCceeeeEEeeccCceEEEEehhhcCCcCEEEEEeccccchHHHHHHHHHHHHcCCEEEEEEEEEEccccChHHHhccC
Confidence            5555555555444555556655444579999999999999999999999999999999999999999988788888866 


Q ss_pred             CCccccc
Q 030139          175 KPLFVLV  181 (182)
Q Consensus       175 ~~~~~l~  181 (182)
                      +|++||+
T Consensus       161 ~~~~sl~  167 (169)
T TIGR01090       161 VPVFSLL  167 (169)
T ss_pred             CceEEEE
Confidence            7999886

A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for this model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage.

>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]

Probab=99.97  E-value=2.1e-29  Score=194.58  Aligned_cols=171  Identities=50%  Similarity=0.798  Sum_probs=154.8

Q ss_pred             hHHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEee
Q 030139           11 PRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM   90 (182)
Q Consensus        11 ~~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~   90 (182)
                      .-.+.|.+.+|..|.|+++++.|.|....+.++..+...+..+++.+++.++|.|++++++||++|..+|..||+|++++
T Consensus         3 ~~~~~L~~~i~~~~~~~~~g~~f~d~~~~~~~~~~~~~~i~~~~~~~~~~~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~v   82 (179)
T COG0503           3 ELMELLKDSIREIPDFPKGGILFVDITLLLGDPELLAKLIDELAERYKDDGIDKIVTIEARGIPLAAAVALELGVPFVPV   82 (179)
T ss_pred             hHHHHHHHHHhhcccccCCCceEEecchhhcCcHHHHHHHHHHHHHhcccCCCEEEEEccccchhHHHHHHHhCCCEEEE
Confidence            35678999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             eccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCccccc
Q 030139           91 RKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE  170 (182)
Q Consensus        91 rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~  170 (182)
                      ||.++.+.......|..+++...+++..+.+.+|++|+||||++.||+|+.+++++++++|+++++++++++..+.+++.
T Consensus        83 RK~~kl~~~~~~~~~~~~~~~~~l~~~~~~l~~G~rVlIVDDllaTGgT~~a~~~Ll~~~ga~vvg~~~~ie~~~~~gr~  162 (179)
T COG0503          83 RKKGKLPEESVVETYYLEYGSETLELHKDALKPGDRVLIVDDLLATGGTALALIELLEQAGAEVVGAAFVIELGELDGRK  162 (179)
T ss_pred             EecCCCCCcceeEEEEEeccceEEEEEhhhCCCCCEEEEEecchhcChHHHHHHHHHHHCCCEEEEEEEEEEcCccccch
Confidence            99998877766666665666667888777778999999999999999999999999999999999999999999988898


Q ss_pred             ccCC--CCccccc
Q 030139          171 RLGE--KPLFVLV  181 (182)
Q Consensus       171 ~l~~--~~~~~l~  181 (182)
                      ++..  .|++++.
T Consensus       163 ~l~~~~~~v~~l~  175 (179)
T COG0503         163 KLEDDGLPVFSLV  175 (179)
T ss_pred             hhccCCceEEEEE
Confidence            8876  6777664

>PRK12560 adenine phosphoribosyltransferase; Provisional

Probab=99.96  E-value=2.6e-27  Score=184.17  Aligned_cols=165  Identities=26%  Similarity=0.371  Sum_probs=133.7

Q ss_pred             HHHhhccccCCCCCCCCc--eEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeee
Q 030139           14 AGISSAIRVIPDFPKPGI--MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR   91 (182)
Q Consensus        14 ~~l~~~~r~~~~~~~~~~--~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~r   91 (182)
                      .+|...+|++|+++.+|+  .|.|...++. |+.++.++..|++.+ +.++|+|+|++.+|+++|..+|..+++|+.+.+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~l~-P~~l~~~~~~l~~~~-~~~~D~Ivg~e~~Gi~lA~~vA~~l~~p~~~~r   81 (187)
T PRK12560          4 KNLYKNARVVNSGKALTTVNEFTDQLPALR-PKVLKETAKEIIKYI-DKDIDKIVTEEDKGAPLATPVSLLSGKPLAMAR   81 (187)
T ss_pred             HHHHhhCCccCCCCCCCcceeEEeChhhcC-HHHHHHHHHHHHHHh-CCCCCEEEEEccccHHHHHHHHHhhCCCEEEec
Confidence            346678999999999998  7999999999 999999999999988 678999999999999999999999999999998


Q ss_pred             ccCCCCCceeeeeeeeeccceeEE--EEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccc
Q 030139           92 KPKKLPGEVISEEYSLEYGKDVME--MHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGR  169 (182)
Q Consensus        92 k~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~  169 (182)
                      |.+..........  .+++...++  +..+...+|++||||||+++||+|+.+++++++++|+.++++++++++.+.+++
T Consensus        82 k~~~~~~~~~~~~--~~~~~~~~eg~~~~~~~~~G~rVlIVDDvitTG~T~~~ai~ll~~aGa~vv~v~~vvd~~~~~g~  159 (187)
T PRK12560         82 WYPYSLSELNYNV--VEIGSEYFEGVVYLNGIEKGDRVAIIDDTLSTGGTVIALIKAIENSGGIVSDVICVIEKTQNNGR  159 (187)
T ss_pred             cCCCcccceeEEe--eeeeccceeeeeEccCCCCcCEEEEEEeccccCHHHHHHHHHHHHCCCEEEEEEEEEEecccchH
Confidence            7653221111000  111111122  222345789999999999999999999999999999999999999999866778


Q ss_pred             ccc---CCCCcccccC
Q 030139          170 ERL---GEKPLFVLVS  182 (182)
Q Consensus       170 ~~l---~~~~~~~l~~  182 (182)
                      +.+   .+.|++||++
T Consensus       160 ~~l~~~~gv~v~sl~~  175 (187)
T PRK12560        160 KKLFTQTGINVKSLVK  175 (187)
T ss_pred             HHHhhccCCcEEEEEE
Confidence            887   4678888863

>TIGR01744 XPRTase xanthine phosphoribosyltransferase

Probab=99.96  E-value=1.7e-27  Score=185.65  Aligned_cols=168  Identities=23%  Similarity=0.315  Sum_probs=138.0

Q ss_pred             chHHHHHhhccccCCCCCCCCceEEech-hhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeE
Q 030139           10 DPRIAGISSAIRVIPDFPKPGIMFQDIT-TLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFV   88 (182)
Q Consensus        10 ~~~~~~l~~~~r~~~~~~~~~~~~~d~~-~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~   88 (182)
                      ++.+++|.+.=|.+|+    ++.|.+.. +...+|+.++.++..+++.+.+.++|+|++++.+|+++|+.+|..+|+|++
T Consensus         2 ~~l~~~~~~~~~~~~~----~~i~~~~~~~~~~~p~~l~~v~~~l~~~~~~~~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v   77 (191)
T TIGR01744         2 ELLKQKIKEEGVVLPG----GILKVDSFLNHQIDPKLMQEVGEEFARRFADDGITKIVTIEASGIAPAIMTGLKLGVPVV   77 (191)
T ss_pred             hHHHHHHhcCCEEcCC----CEEEEehhhccccCHHHHHHHHHHHHHHhccCCCCEEEEEccccHHHHHHHHHHHCCCEE
Confidence            4678899999999998    87665532 223699999999999999998888999999999999999999999999999


Q ss_pred             eeeccCCCCC--ceee---eeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEec
Q 030139           89 PMRKPKKLPG--EVIS---EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIEL  163 (182)
Q Consensus        89 ~~rk~~~~~~--~~~~---~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~  163 (182)
                      ++||..+.+.  ....   .+|.. ++...+++..+.+.+|+||+||||++|||+|+.+++++++++|++++++++++++
T Consensus        78 ~vRK~~k~~~~~~~~~~~~~s~~~-~~~~~l~i~~~~l~~G~rVLIVDDvvtTGgT~~a~~~ll~~aGa~Vvgv~~lvd~  156 (191)
T TIGR01744        78 FARKKKPLTLTDNLLTASVHSFTK-QTTSTVAVSGEFLSDQDRVLIIDDFLANGQAAHGLVDIAKQAGAKIAGIGIVIEK  156 (191)
T ss_pred             EEEeCCCCCCCCcceEEEEEEeec-CccEEEEEEHHhCCCcCEEEEEEehhccChHHHHHHHHHHHCCCEEEEEEEEEEe
Confidence            9998865432  2222   22221 2344567766666799999999999999999999999999999999999999999


Q ss_pred             CCcccccccC--CCCcccccC
Q 030139          164 PELKGRERLG--EKPLFVLVS  182 (182)
Q Consensus       164 ~~~~~~~~l~--~~~~~~l~~  182 (182)
                      .+.+++++|.  ++|++||++
T Consensus       157 ~~~~g~~~l~~~gvpv~sL~~  177 (191)
T TIGR01744       157 SFQNGRQELVELGYRVESLAR  177 (191)
T ss_pred             cCccHHHHHHhcCCcEEEEEE
Confidence            8778888885  478988863

This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.

>PRK09219 xanthine phosphoribosyltransferase; Validated

Probab=99.96  E-value=1.9e-27  Score=184.96  Aligned_cols=166  Identities=27%  Similarity=0.353  Sum_probs=137.3

Q ss_pred             chHHHHHhhccccCCCCCCCCceEEechhhh---cCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCC
Q 030139           10 DPRIAGISSAIRVIPDFPKPGIMFQDITTLL---LDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAK   86 (182)
Q Consensus        10 ~~~~~~l~~~~r~~~~~~~~~~~~~d~~~l~---~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp   86 (182)
                      ++.++++...=|.+|+    ||.|  ++.++   .+|+.++.++..+++.+.+.++|+|+|++.+|+++|+.+|..+|+|
T Consensus         2 ~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~P~~l~~i~~~la~~~~~~~~D~Ivg~e~~GiplA~~lA~~Lg~p   75 (189)
T PRK09219          2 KLLEERILKDGKVLSG----NILK--VDSFLNHQVDPKLMNEIGKEFARRFKDEGITKILTIEASGIAPAVMAALALGVP   75 (189)
T ss_pred             hHHHHHHhcCCEEcCC----CEEE--EhhhhccccCHHHHHHHHHHHHHHhccCCCCEEEEEccccHHHHHHHHHHHCCC
Confidence            3567788888888988    7655  45455   8999999999999999988889999999999999999999999999


Q ss_pred             eEeeeccCCCC--Cceeeeeee-eec-cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEe
Q 030139           87 FVPMRKPKKLP--GEVISEEYS-LEY-GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIE  162 (182)
Q Consensus        87 ~~~~rk~~~~~--~~~~~~~~~-~~~-~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~  162 (182)
                      ++++||..+.+  ++..+..+. .+. ....+++..+...+|++|+||||+++||+|+.+++++++++|+++++++++++
T Consensus        76 ~v~vRK~~k~~~~~~~~~~~~~~~~~~~~~~l~i~~~~i~~G~rVlIVDDviaTGgT~~a~~~lv~~aGa~vvgv~~lvd  155 (189)
T PRK09219         76 VVFAKKKKSLTLTDDVYTATVYSFTKQVTSTVSVSKKFLSEGDRVLIIDDFLANGQAALGLIDIIEQAGAKVAGIGIVIE  155 (189)
T ss_pred             EEEEEECCCCCCCCceEEEEEeeeccCceEEEEEEhhhCCCCCEEEEEeehhhcChHHHHHHHHHHHCCCEEEEEEEEEE
Confidence            99999987653  343332221 112 23457777777789999999999999999999999999999999999999999


Q ss_pred             cCCcccccccCC--CCccccc
Q 030139          163 LPELKGRERLGE--KPLFVLV  181 (182)
Q Consensus       163 ~~~~~~~~~l~~--~~~~~l~  181 (182)
                      +...+|++++.+  .|+++|+
T Consensus       156 ~~~~~g~~~l~~~g~~~~sl~  176 (189)
T PRK09219        156 KSFQDGRKLLEEKGYRVESLA  176 (189)
T ss_pred             ccCccHHHHHHhcCCcEEEEE
Confidence            876678888754  6788876

>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type

Probab=99.96  E-value=2.6e-27  Score=192.28  Aligned_cols=163  Identities=21%  Similarity=0.393  Sum_probs=139.7

Q ss_pred             chHHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe
Q 030139           10 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP   89 (182)
Q Consensus        10 ~~~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~   89 (182)
                      ++.|++|.+.-|++|+    |  |++++.++.+|..++.+++.++..+.+.++|+|++++.+|+|+|.++|.+||+|+++
T Consensus        83 ~~l~~~l~~~~rilpg----g--~~~~s~ll~~P~~l~~ig~~la~~~~~~~iD~VvgvetkGIpLA~avA~~L~vp~vi  156 (268)
T TIGR01743        83 EELCQSLSEPERILPG----G--YLYLTDILGKPSILSKIGKILASVFAEREIDAVMTVATKGIPLAYAVASVLNVPLVI  156 (268)
T ss_pred             HHHHHHHHHCCCcccC----C--eEEechhhcCHHHHHHHHHHHHHHhcCCCCCEEEEEccchHHHHHHHHHHHCCCEEE
Confidence            5678899999999988    6  455889999999999999999999988889999999999999999999999999999


Q ss_pred             eeccCCC-CCceeeeeeeeecc--ceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCc
Q 030139           90 MRKPKKL-PGEVISEEYSLEYG--KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPEL  166 (182)
Q Consensus        90 ~rk~~~~-~~~~~~~~~~~~~~--~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~  166 (182)
                      +||..+. ++++.+..|...+.  .+.+++.++.+.+|+|||||||+++||+|+.+++++++++|++++++++++++.  
T Consensus       157 vRK~~K~t~g~~vs~nY~sgs~~~ie~m~l~k~~l~~G~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~VvGv~vlve~~--  234 (268)
T TIGR01743       157 VRKDSKVTEGSTVSINYVSGSSNRIQTMSLAKRSLKTGSKVLIIDDFMKAGGTINGMINLLDEFDAEVAGIGVLIDNE--  234 (268)
T ss_pred             EEECCCCCCCCcEEEEEEcccCccceEEEEehhhCCCcCEEEEEeeecccCHHHHHHHHHHHHCCCEEEEEEEEEECC--
Confidence            9998876 66777777754322  235777777778999999999999999999999999999999999999999996  


Q ss_pred             ccccccCCCCccccc
Q 030139          167 KGRERLGEKPLFVLV  181 (182)
Q Consensus       167 ~~~~~l~~~~~~~l~  181 (182)
                      ++++++. .+++||+
T Consensus       235 ~~~~~l~-~~~~SL~  248 (268)
T TIGR01743       235 GVDEKLV-DDYMSLL  248 (268)
T ss_pred             CChHHcC-CCceEEE
Confidence            3455553 3677765

This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.

>PRK09213 pur operon repressor; Provisional

Probab=99.95  E-value=5.7e-27  Score=190.69  Aligned_cols=163  Identities=26%  Similarity=0.446  Sum_probs=138.5

Q ss_pred             chHHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe
Q 030139           10 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP   89 (182)
Q Consensus        10 ~~~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~   89 (182)
                      ++.+++|.+..|.+|+    +  |++++.++.+|..++.+++.++..+.+.++|+|++++.+|+|+|..+|.+||+|+++
T Consensus        85 ~~L~~~L~~~~rilpG----g--f~y~sdll~~P~~l~~i~~~la~~~~~~~iD~Vvtvet~GIplA~~vA~~L~vp~vi  158 (271)
T PRK09213         85 EELCERLSEPDRILPG----G--YLYLSDLLGNPSILRKIGRIIASAFADKKIDAVMTVETKGIPLAYAVANYLNVPFVI  158 (271)
T ss_pred             HHHHHHHHhCCccCCC----C--eEEeCcccCCHHHHHHHHHHHHHHhcccCCCEEEEEccccHHHHHHHHHHHCCCEEE
Confidence            5678889999999988    5  456788999999999999999999988789999999999999999999999999999


Q ss_pred             eeccCCC-CCceeeeeeeeecc--ceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCc
Q 030139           90 MRKPKKL-PGEVISEEYSLEYG--KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPEL  166 (182)
Q Consensus        90 ~rk~~~~-~~~~~~~~~~~~~~--~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~  166 (182)
                      +||..+. ++++.+..|.....  ...+++.++.+.+|++||||||+++||+|+.+++++++++|++++++++++++.+ 
T Consensus       159 vRK~~K~~~G~~vs~~y~sgs~~~ie~m~L~~~~l~~G~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~VvGv~vlVd~~~-  237 (271)
T PRK09213        159 VRRDSKVTEGSTVSINYVSGSSKRIETMSLSKRSLKEGSRVLIVDDFMKAGGTINGMISLLKEFDAEVVGIGVLVETKE-  237 (271)
T ss_pred             EEECCCCCCCCcEEEEEEecccccceEEEEeHhhcCCcCEEEEEeeecccCHhHHHHHHHHHHCCCEEEEEEEEEECCC-
Confidence            9998775 66777766654222  2357777777789999999999999999999999999999999999999999863 


Q ss_pred             ccccccCCCCccccc
Q 030139          167 KGRERLGEKPLFVLV  181 (182)
Q Consensus       167 ~~~~~l~~~~~~~l~  181 (182)
                       +.+++. .|++||+
T Consensus       238 -~~~~l~-~~~~SL~  250 (271)
T PRK09213        238 -PEERLV-DDYVSLL  250 (271)
T ss_pred             -ChhhcC-CceEEEE
Confidence             445443 3677765

>PRK13810 orotate phosphoribosyltransferase; Provisional

Probab=99.94  E-value=2.6e-26  Score=178.32  Aligned_cols=136  Identities=26%  Similarity=0.438  Sum_probs=119.8

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccc
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGK  111 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~  111 (182)
                      .|+|+..++.+|+.++.+++.|++.+.+.++|.|+|++.+|+|+|+.+|..+|+|++++||..+            +++.
T Consensus        44 ~yiD~~~~~~~p~~~~~i~~~la~~~~~~~~d~I~g~~~~GiplA~~vA~~l~~p~v~vRK~~k------------~~g~  111 (187)
T PRK13810         44 YYIDIKKASTDPKTLKLIARQAALRIKEMDVDTVAGVELGGVPLATAVSLETGLPLLIVRKSVK------------DYGT  111 (187)
T ss_pred             EEEECchhcCCHHHHHHHHHHHHHHhccCCCCEEEEEccchHHHHHHHHHHhCCCEEEEecCCC------------ccCC
Confidence            7999999999999999999999999988789999999999999999999999999999998764            2233


Q ss_pred             eeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC--CCcccccC
Q 030139          112 DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE--KPLFVLVS  182 (182)
Q Consensus       112 ~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~--~~~~~l~~  182 (182)
                      ..+.  .+...+|++|+||||++|||+|+.+++++++++|++++++++++++.+ +++++|.+  +|+++|++
T Consensus       112 ~~~~--~g~~~~g~rVlIVDDVitTGgS~~~~i~~l~~~Ga~V~~v~vlvdr~~-g~~~~l~~~gi~~~sl~~  181 (187)
T PRK13810        112 GSRF--VGDLKPEDRIVMLEDVTTSGGSVREAIEVVREAGAYIKYVITVVDREE-GAEENLKEADVELVPLVS  181 (187)
T ss_pred             CceE--EccCCCcCEEEEEEeccCCChHHHHHHHHHHHCCCEEEEEEEEEECCc-ChHHHHHHcCCcEEEEEE
Confidence            3322  245578999999999999999999999999999999999999999875 78888874  67888763

>PRK08558 adenine phosphoribosyltransferase; Provisional

Probab=99.94  E-value=6.6e-26  Score=182.19  Aligned_cols=162  Identities=26%  Similarity=0.391  Sum_probs=131.2

Q ss_pred             HHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeec
Q 030139           13 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRK   92 (182)
Q Consensus        13 ~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk   92 (182)
                      .+.|.+.++++|+    |  |+|++.++.+|+.++.+++.++..+.+.++|+|++++.+|+++|..+|..||+|++++||
T Consensus        69 ~~~l~~ri~~~~~----g--y~d~~~il~~p~~~~~v~~~la~~~~~~~~D~Vvtv~~~GI~lA~~lA~~L~~p~vi~Rk  142 (238)
T PRK08558         69 EEEVKARIKVDDE----G--YVDNSSVVFDPSFLRLIAPVVAERFMGLRVDVVLTAATDGIPLAVAIASYFGADLVYAKK  142 (238)
T ss_pred             HHHHHhhcccCCC----C--EEEchhhhcCHHHHHHHHHHHHHHccCCCCCEEEEECcccHHHHHHHHHHHCcCEEEEEe
Confidence            4445666666765    4  789999999999999999999999987789999999999999999999999999999988


Q ss_pred             cCCCC-Cceeeeeeeeec-cc-eeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccc
Q 030139           93 PKKLP-GEVISEEYSLEY-GK-DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGR  169 (182)
Q Consensus        93 ~~~~~-~~~~~~~~~~~~-~~-~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~  169 (182)
                      .++.+ +.+.+ .|.... +. ..+++..+.+.+|++||||||+++||+|+.+++++++++|+++++++++++..+ .++
T Consensus       143 ~~~~~~~~~v~-~y~s~s~~~~~~~~l~~~~l~~G~rVLIVDDvi~TG~Tl~~~~~ll~~~ga~vvgv~vlv~~~~-~~~  220 (238)
T PRK08558        143 SKETGVEKFYE-EYQRLASGIEVTLYLPASALKKGDRVLIVDDIIRSGETQRALLDLARQAGADVVGVFFLIAVGE-VGI  220 (238)
T ss_pred             cCCCCCcceEE-EeeccCCCceeEEEecHHHcCCcCEEEEEecccccCHHHHHHHHHHHHcCCEEEEEEEEEecCc-hHH
Confidence            65432 23333 443221 21 345555556789999999999999999999999999999999999999999875 456


Q ss_pred             cccC---CCCcccccC
Q 030139          170 ERLG---EKPLFVLVS  182 (182)
Q Consensus       170 ~~l~---~~~~~~l~~  182 (182)
                      +++.   +.|+.++++
T Consensus       221 ~~l~~~~~vpv~sl~~  236 (238)
T PRK08558        221 DRAREETDAPVDALYT  236 (238)
T ss_pred             HHHhHhcCCCEEEEEE
Confidence            6664   578888763

>PRK13809 orotate phosphoribosyltransferase; Provisional

Probab=99.93  E-value=1e-24  Score=171.71  Aligned_cols=144  Identities=19%  Similarity=0.297  Sum_probs=121.2

Q ss_pred             CCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeee
Q 030139           24 PDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISE  103 (182)
Q Consensus        24 ~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~  103 (182)
                      ++..+|  .|+|++.++.+|..++.++..+++.+.+.++|+|+|++.+|+++|..+|..+++|+.+.||..+.+++.   
T Consensus        32 SG~~S~--~y~D~~~i~~~p~~l~~i~~~l~~~~~~~~~d~IvG~~~~Gi~~A~~vA~~l~~p~~~~RK~~K~~G~~---  106 (206)
T PRK13809         32 SGEETP--IYVDMRLVISSPEVLQTIATLIWRLRPSFNSSLLCGVPYTALTLATSISLKYNIPMVLRRKELKNVDPS---  106 (206)
T ss_pred             CcCCCC--EEEEChhhccCHHHHHHHHHHHHHHhccCCCCEEEEecCccHHHHHHHHHHhCCCEEEEeCCCCCCCCc---
Confidence            344444  789999999999999999999999987778999999999999999999999999999999877643321   


Q ss_pred             eeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCccccc
Q 030139          104 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV  181 (182)
Q Consensus       104 ~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~  181 (182)
                              +.+.+ .+...+|++|+||||++|||+|+.+++++|+++|++++++++++++. .++.+++.  +.|++||+
T Consensus       107 --------~~~~~-~g~~~~g~~VlIVDDViTTG~Ti~~a~~~L~~~G~~vv~v~vlvdr~-~~~~~~l~~~gi~v~sl~  176 (206)
T PRK13809        107 --------DAIKV-EGLFTPGQTCLVINDMVSSGKSIIETAVALEEEGLVVREALVFLDRQ-KGACQPLGPQGIKLSSVF  176 (206)
T ss_pred             --------CEEEE-ccccCCCCEEEEEEeccccCHHHHHHHHHHHHCCCEEEEEEEEEECc-ccHHHHHHhcCCCEEEEE
Confidence                    12222 23457899999999999999999999999999999999999999986 36777775  46888876


Q ss_pred             C
Q 030139          182 S  182 (182)
Q Consensus       182 ~  182 (182)
                      +
T Consensus       177 ~  177 (206)
T PRK13809        177 T  177 (206)
T ss_pred             E
Confidence            3

>PRK07322 adenine phosphoribosyltransferase; Provisional

Probab=99.93  E-value=4.5e-24  Score=164.88  Aligned_cols=162  Identities=28%  Similarity=0.399  Sum_probs=123.7

Q ss_pred             HhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCC
Q 030139           16 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKK   95 (182)
Q Consensus        16 l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~   95 (182)
                      ++...||+|+|+.++..+++...++.+|..++.+++.|++.+.. ++|+|+|++.+|+++|..+|..+++|+...+|.++
T Consensus         8 ~~~~~~~~~~~~~~~~~~i~~~k~~~dp~l~~~~~~~La~~l~~-~~d~Iv~v~~gGiplA~~lA~~L~~p~~~~~k~~~   86 (178)
T PRK07322          8 VGGVTRELPLIRVGPDLAIALFVILGDTELTEAAAEALAKRLPT-EVDVLVTPETKGIPLAHALSRRLGKPYVVARKSRK   86 (178)
T ss_pred             EcCEEeecCeeEeCCCCEEEEEhhhCCHHHHHHHHHHHHHHcCC-CCCEEEEeccCCHHHHHHHHHHHCCCEEEEEEeCC
Confidence            45678999999988777889999999999999999999999976 78999999999999999999999999988876543


Q ss_pred             C--CCceeeeeeeeecccee-EEEEcc--ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCccccc
Q 030139           96 L--PGEVISEEYSLEYGKDV-MEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE  170 (182)
Q Consensus        96 ~--~~~~~~~~~~~~~~~~~-~~l~~~--~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~  170 (182)
                      .  ........+....+... +.+...  ...+|++|+||||+++||+|+.++++.|+++|++++++++++++.+...+-
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~aa~~~L~~~GA~~V~~~~v~~~~~~~~~~  166 (178)
T PRK07322         87 PYMQDPIIQEVVSITTGKPQLLVLDGADAEKLKGKRVAIVDDVVSTGGTLTALERLVERAGGQVVAKAAIFAEGDASNRL  166 (178)
T ss_pred             CCCCCceEEEEEEEEeccceEEEecCccccccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEcCCCCCCC
Confidence            2  22221111111112222 222211  125799999999999999999999999999999999999999987533332


Q ss_pred             c---cCCCCcc
Q 030139          171 R---LGEKPLF  178 (182)
Q Consensus       171 ~---l~~~~~~  178 (182)
                      .   +.+.|+|
T Consensus       167 ~~~~~~~~~~~  177 (178)
T PRK07322        167 DVIYLAHLPLF  177 (178)
T ss_pred             ceEeecccCCC
Confidence            2   3345554

>PRK13812 orotate phosphoribosyltransferase; Provisional

Probab=99.92  E-value=3.7e-24  Score=164.98  Aligned_cols=143  Identities=22%  Similarity=0.319  Sum_probs=117.7

Q ss_pred             ccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCce
Q 030139           21 RVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEV  100 (182)
Q Consensus        21 r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~  100 (182)
                      ..-++.++|  .|+|.+.+..+|+.++.+++.+++.+.+  .|+|+|++.+|+++|..+|..+|+|+.+.||.++.    
T Consensus        22 ~l~SG~~S~--~yid~~~~~~~p~~~~~i~~~l~~~i~~--~d~ivg~~~ggi~lA~~lA~~l~~p~~~~rk~~k~----   93 (176)
T PRK13812         22 ELSHGGTSE--YYVDKYLFETDPDCLRLIAEAFADRIDE--DTKLAGVALGAVPLVAVTSVETGVPYVIARKQAKE----   93 (176)
T ss_pred             EECcCCcCC--EEEeCeeccCCHHHHHHHHHHHHHHhcc--CCEEEEeecchHHHHHHHHHHHCCCEEEEeccCCc----
Confidence            333344444  7899999999999999999999998854  38999999999999999999999999999987652    


Q ss_pred             eeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCcc
Q 030139          101 ISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLF  178 (182)
Q Consensus       101 ~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~  178 (182)
                              ++.....  .+...+|++|+||||+++||+|+.++++.|++.|++++++++++++. .++++++.  ++|++
T Consensus        94 --------yg~~~~~--~g~~~~g~~VlIVDDvitTG~Tl~~~~~~l~~~Ga~vv~~~vlvdr~-~~~~~~l~~~g~~v~  162 (176)
T PRK13812         94 --------YGTGNRI--EGRLDEGEEVVVLEDIATTGQSAVDAVEALREAGATVNRVLVVVDRE-EGARENLADHDVELE  162 (176)
T ss_pred             --------CCCCCeE--EecCCCcCEEEEEEEeeCCCHHHHHHHHHHHHCCCeEEEEEEEEECC-cchHHHHHhcCCcEE
Confidence                    2222111  13446899999999999999999999999999999999999999986 36677764  57888


Q ss_pred             cccC
Q 030139          179 VLVS  182 (182)
Q Consensus       179 ~l~~  182 (182)
                      +|++
T Consensus       163 sL~~  166 (176)
T PRK13812        163 ALVT  166 (176)
T ss_pred             EEEe
Confidence            8863

>TIGR00336 pyrE orotate phosphoribosyltransferase

Probab=99.92  E-value=4.4e-24  Score=164.20  Aligned_cols=147  Identities=16%  Similarity=0.268  Sum_probs=123.5

Q ss_pred             cccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC-CCccEEEeeCCCChhhHHHHHHHhCCC-----eEeeecc
Q 030139           20 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAK-----FVPMRKP   93 (182)
Q Consensus        20 ~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~-~~~d~Iv~v~~~G~~~a~~la~~l~vp-----~~~~rk~   93 (182)
                      +..-.+.++|  .|+|+..++.+|+.++.++..+++.+.+ .++|+|+|++.+|+++|..+|..+++|     +.+.||.
T Consensus        14 f~l~SG~~s~--~y~d~~~i~~~p~~~~~v~~~~~~~~~~~~~~d~Ivg~~~gG~~~A~~la~~l~~~~~~~~~~~~rk~   91 (173)
T TIGR00336        14 FTLSSGRKSP--YYFNIKLFNTGPELANLIARYAAAIIKSHLEFDVIAGPALGGIPIATAVSVKLAKPGGDIPLCFNRKE   91 (173)
T ss_pred             EEECCCCcCC--EEEECeecCChHHHHHHHHHHHHHHHHhcCCCCEEEccccChHHHHHHHHHHhcCcCCCceEEEEcCC
Confidence            5555566666  6899999999999999999999998876 689999999999999999999999999     8888876


Q ss_pred             CCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC
Q 030139           94 KKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG  173 (182)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~  173 (182)
                      ++..            +...+  ..+...+|++||||||+++||+|+.+++++|+++|+++++++|++++.+.++++++.
T Consensus        92 ~k~~------------g~~~~--~~g~~~~g~~VlIVDDvi~TG~Tl~~a~~~l~~~Ga~v~~~~vlvdr~~~~~~~~l~  157 (173)
T TIGR00336        92 AKDH------------GEGGN--IEGELLEGDKVVVVEDVITTGTSILEAVEIIQAAGGQVAGVIIAVDRQERSAGQEFE  157 (173)
T ss_pred             cccC------------CCCCc--eecCCCCCCEEEEEeccccChHHHHHHHHHHHHcCCeEEEEEEEEecCchhHHHHHH
Confidence            5421            11111  113456899999999999999999999999999999999999999998767888875


Q ss_pred             ---CCCcccccC
Q 030139          174 ---EKPLFVLVS  182 (182)
Q Consensus       174 ---~~~~~~l~~  182 (182)
                         ++|++||+.
T Consensus       158 ~~~gv~~~sl~~  169 (173)
T TIGR00336       158 KEYGLPVISLIT  169 (173)
T ss_pred             HhcCCeEEEEEe
Confidence               678998863

The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme.

>PRK13811 orotate phosphoribosyltransferase; Provisional

Probab=99.92  E-value=8.5e-24  Score=162.19  Aligned_cols=132  Identities=27%  Similarity=0.429  Sum_probs=111.4

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccc
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGK  111 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~  111 (182)
                      .|+|+..++.+|+.++.+++.+++.+   ++|+|+|++.+|+++|..+|..+|+|+.++||.++..            +.
T Consensus        30 ~y~d~~~l~~~p~~~~~l~~~l~~~~---~~d~Vvg~~~gGi~~A~~~a~~l~~p~~~~rK~~k~~------------g~   94 (170)
T PRK13811         30 YYIDIKTAITHPALLKEIAAEVAKRY---DFDVVAGVAVGGVPLAVAVSLAAGKPYAIIRKEAKDH------------GK   94 (170)
T ss_pred             EEEeCchhccCHHHHHHHHHHHHhhC---CCCEEEecCcCcHHHHHHHHHHHCCCEEEEecCCCCC------------CC
Confidence            67899999999999999999987643   6899999999999999999999999999999876421            22


Q ss_pred             eeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCcccccC
Q 030139          112 DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLVS  182 (182)
Q Consensus       112 ~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~~  182 (182)
                      ..+..  + ..+|++|+||||+++||+|+.+++++|+++|++++++++++++.+ ++++++.  ++|+++|++
T Consensus        95 ~~~~~--g-~~~g~~VlIVDDvi~TG~T~~~~~~~l~~~Ga~v~~~~~~vdr~~-g~~~~l~~~gv~~~sl~~  163 (170)
T PRK13811         95 AGLII--G-DVKGKRVLLVEDVTTSGGSALYGIEQLRAAGAVVDDVVTVVDREQ-GAEELLAELGITLTPLVR  163 (170)
T ss_pred             cceEE--c-ccCCCEEEEEEecccccHHHHHHHHHHHHCCCeEEEEEEEEECCc-cHHHHHHhcCCcEEEEeE
Confidence            22221  2 268999999999999999999999999999999999999999974 5677765  568888863

>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family

Probab=99.91  E-value=3.8e-23  Score=160.77  Aligned_cols=142  Identities=27%  Similarity=0.417  Sum_probs=115.9

Q ss_pred             cccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCC
Q 030139           20 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP   97 (182)
Q Consensus        20 ~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~   97 (182)
                      ++.-.+...|  .|+|++.++.+|+.++.++..|++.+.+.  ++|+|+|++.+|+++|..+|..+++|+.+.+|.+.  
T Consensus        17 f~l~sg~~s~--~yid~~~l~~~p~~~~~~~~~La~~i~~~~~~~d~Ivgi~~gGi~~A~~la~~L~~~~i~~~k~~~--   92 (187)
T TIGR01367        17 FLLSSGKHSP--YFLQSATLLEHPEALMELGGELAQKILDYGLKVDFIVGPAMGGVILGYEVARQLSVRSIFAEREGG--   92 (187)
T ss_pred             EEecCCCcCC--eeEechhhhcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEccCcHHHHHHHHHHhCCCeEEEEEeCC--
Confidence            3444444445  68999999999999999999999999764  78999999999999999999999999987765431  


Q ss_pred             CceeeeeeeeeccceeEEEEcc-ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCC
Q 030139           98 GEVISEEYSLEYGKDVMEMHVG-AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKP  176 (182)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~l~~~-~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~  176 (182)
                                     .+.+..+ ...+|++||||||+++||+||.++++.|+++|++++++++++++.+  +.....++|
T Consensus        93 ---------------~~~~~~~~~l~~G~~VLIVDDIi~TG~Tl~~a~~~l~~~Ga~vv~~~vlid~~~--~~~~~~~~~  155 (187)
T TIGR01367        93 ---------------GMKLRRGFAVKPGEKFVAVEDVVTTGGSLLEAIRAIEGQGGQVVGLACIIDRSQ--GGKPDSGVP  155 (187)
T ss_pred             ---------------cEEEeecccCCCCCEEEEEEeeecchHHHHHHHHHHHHcCCeEEEEEEEEECcC--CCcccCCCC
Confidence                           1111112 2468999999999999999999999999999999999999999873  444555788


Q ss_pred             cccccC
Q 030139          177 LFVLVS  182 (182)
Q Consensus       177 ~~~l~~  182 (182)
                      ++++++
T Consensus       156 ~~sl~~  161 (187)
T TIGR01367       156 LMSLKE  161 (187)
T ss_pred             EEEEEE
Confidence            888763

This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species.

>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional

Probab=99.91  E-value=5.9e-23  Score=161.33  Aligned_cols=145  Identities=22%  Similarity=0.340  Sum_probs=115.5

Q ss_pred             CCCCceEEechhhhcCHHHHHHHHHHHHHHhc--CCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeee
Q 030139           27 PKPGIMFQDITTLLLDTKAFRDTIDLFVERYK--DKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEE  104 (182)
Q Consensus        27 ~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~--~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~  104 (182)
                      |.|+..|+|+..+..+|+.++.+++.|++.+.  +.++|+|+|++.+|+++|+.+|..+++|+...++.+...+...   
T Consensus        49 ~~~~~~yid~~~~~~~~~~l~~i~~~la~~i~~~~~~~D~Ivgi~~gG~~~A~~lA~~L~~~~~~~~~~k~~~~~~~---  125 (200)
T PRK02277         49 PAPKDIHIDWSSIGSSSSRLRYIASAMADMLEKEDEEVDVVVGIAKSGVPLATLVADELGKDLAIYHPKKWDHGEGE---  125 (200)
T ss_pred             CCCCCEEEEChhhccCHHHHHHHHHHHHHHHHhcCCCCCEEEeeccCCHHHHHHHHHHhCCCcEEEecccccccccc---
Confidence            34566899999999999999999999999874  3679999999999999999999999999977765432111000   


Q ss_pred             eeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccccC
Q 030139          105 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS  182 (182)
Q Consensus       105 ~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l~~  182 (182)
                          .....+.. .....+|++|+||||++|||+|+.++++.|+++|+++++++|++++.   +.+++.+.|++||++
T Consensus       126 ----~~~~~~~~-~~~~~~gk~VlIVDDVitTG~Tl~~ai~~l~~~Ga~~v~v~vlvdk~---g~~~~~~vpv~sl~~  195 (200)
T PRK02277        126 ----KKTGSFSR-NFASVEGKRCVIVDDVITSGTTMKETIEYLKEHGGKPVAVVVLIDKS---GIDEIDGVPVYSLIR  195 (200)
T ss_pred             ----cccceecc-ccccCCcCEEEEEeeccCchHHHHHHHHHHHHcCCEEEEEEEEEECc---chhhhcCCCeEEEEE
Confidence                00111110 01247899999999999999999999999999999999999999984   566778899999874

>PRK05500 bifunctional orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Validated

Probab=99.90  E-value=6.3e-23  Score=178.48  Aligned_cols=135  Identities=19%  Similarity=0.359  Sum_probs=119.2

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccc
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGK  111 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~  111 (182)
                      .|+|++.++.+|..++.+++.+++.+++.++|.|+|++.+|+|+|+.+|..+|+|+++.||..|            +++.
T Consensus       315 ~YiD~~~lls~P~~l~~v~~~la~~l~~~~~D~I~Gia~gGiPlAt~lA~~lg~p~v~vRKe~K------------~~G~  382 (477)
T PRK05500        315 YYIDLRKIISNPQLFHQVLSAYAEILKNLTFDRIAGIPYGSLPTATGLALHLHHPMIFPRKEVK------------AHGT  382 (477)
T ss_pred             EEEEChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEEccchHHHHHHHHHHhCCCEEEEecCcC------------ccCC
Confidence            7999999999999999999999999987789999999999999999999999999999998865            2333


Q ss_pred             eeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC--CCccccc
Q 030139          112 DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE--KPLFVLV  181 (182)
Q Consensus       112 ~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~--~~~~~l~  181 (182)
                      ..+  ..+...+|++|+|||||+|||+|+.++++.|++.|++++++++++++.+ +++++|.+  +|++||+
T Consensus       383 ~~~--ieG~~~~G~rVlIVDDViTTGgSi~eaie~l~~aG~~V~~v~vlVDR~~-g~~~~L~~~gv~~~Sl~  451 (477)
T PRK05500        383 RRL--IEGNFHPGETVVVVDDILITGKSVMEGAEKLKSAGLNVRDIVVFIDHEQ-GVKDKLQSHGYQAYSVL  451 (477)
T ss_pred             Cce--EecCCCCcCEEEEEEeccccCHHHHHHHHHHHHCCCEEEEEEEEEECCc-chHHHHHhcCCCEEEEE
Confidence            332  2345678999999999999999999999999999999999999999975 77888864  6788876

>PRK00455 pyrE orotate phosphoribosyltransferase; Validated

Probab=99.90  E-value=1.5e-22  Score=159.30  Aligned_cols=134  Identities=28%  Similarity=0.416  Sum_probs=113.2

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeec
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY  109 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~  109 (182)
                      .|+|...++.+|..++.++..|++.+.+.  ++|+|+|++.+|+++|..+|..+++|+.+.+|..+..            
T Consensus        33 ~y~d~~~i~~~p~~~~~~~~~la~~i~~~~~~~d~Ivgi~~gG~~~A~~la~~L~~~~~~~rk~~~~~------------  100 (202)
T PRK00455         33 YYFDCRKLLSYPEALALLGRFLAEAIKDSGIEFDVVAGPATGGIPLAAAVARALDLPAIFVRKEAKDH------------  100 (202)
T ss_pred             eeEeChhhhcCHHHHHHHHHHHHHHHHhcCCCCCEEEecccCcHHHHHHHHHHhCCCEEEEecccCCC------------
Confidence            68899999999999999999999999764  8999999999999999999999999999998765421            


Q ss_pred             cce-eEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCccccc
Q 030139          110 GKD-VMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV  181 (182)
Q Consensus       110 ~~~-~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~  181 (182)
                      +.. .+.   +...+|++||||||+++||+|+.++++.|++.|++++++++++++. .++++++.  +.|++||+
T Consensus       101 g~~~~~~---~~~~~g~~VliVDDvi~tG~Tl~~~~~~l~~~Ga~~v~~~vlv~~~-~~~~~~~~~~g~~~~sl~  171 (202)
T PRK00455        101 GEGGQIE---GRRLFGKRVLVVEDVITTGGSVLEAVEAIRAAGAEVVGVAVIVDRQ-SAAQEVFADAGVPLISLI  171 (202)
T ss_pred             CCCceEE---ccCCCCCEEEEEecccCCcHHHHHHHHHHHHcCCEEEEEEEEEECc-chHHHHHHhcCCcEEEEe
Confidence            111 111   2235799999999999999999999999999999999999999996 35566554  46788876

>PRK06031 phosphoribosyltransferase; Provisional

Probab=99.88  E-value=7.1e-22  Score=158.13  Aligned_cols=153  Identities=20%  Similarity=0.392  Sum_probs=112.5

Q ss_pred             HHhhccccCCCCCCCCceEEechhhhcCH---HHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCC-eEee
Q 030139           15 GISSAIRVIPDFPKPGIMFQDITTLLLDT---KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAK-FVPM   90 (182)
Q Consensus        15 ~l~~~~r~~~~~~~~~~~~~d~~~l~~~~---~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp-~~~~   90 (182)
                      +|..++|.+|+++      .|+..++.++   +.++.+++.|++.+...++|+|+|++.+|+++|..+|..||++ ++.+
T Consensus        41 ~l~~~~r~~~~~~------~~i~~ll~~~~~~~~~~~la~~La~~~~~~~~DvIVgv~~~Gi~lA~~lA~~Lg~~~~vpl  114 (233)
T PRK06031         41 QLLLPIRGLPDGD------RALASLIVNQASFEVLDALAEHLAEKARAFDPDVVAGLPTLGLTLAAAVARKLGHTRYVPL  114 (233)
T ss_pred             EeccCcEECCCCC------CchhhHhCChhHHHHHHHHHHHHHHHcccCCCcEEEEeccCCHHHHHHHHHHHCCCCceEE
Confidence            4667777777733      4788888887   5667899999999877789999999999999999999999974 4444


Q ss_pred             eccCCCC--Cce-e-eeeeeeeccceeEEEEcc--ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139           91 RKPKKLP--GEV-I-SEEYSLEYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus        91 rk~~~~~--~~~-~-~~~~~~~~~~~~~~l~~~--~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                      ++.++..  ... . ...+......+.+.+...  ...+|++||||||+++||+|+.+++++|+++|++++++++++++.
T Consensus       115 ~~~rK~~~~~~l~~~~~sitt~~~~~~~~l~~~~~~~~~GkrVLIVDDVitTG~Tl~aa~~lL~~~Ga~Vvgv~v~v~~g  194 (233)
T PRK06031        115 GTSRKFWYRDELSVPLSSITTPDQGKRLYIDPRMLPLLEGRRVALIDDVISSGASIVAGLRLLAACGIEPAGIGAAMLQS  194 (233)
T ss_pred             EEccccccccccccceeeeeccCccceEEecccccccCCCCEEEEEEeEccccHHHHHHHHHHHHcCCeEEEEEEEEEcc
Confidence            4433321  110 0 011110011223444322  246899999999999999999999999999999999999999987


Q ss_pred             CcccccccCC
Q 030139          165 ELKGRERLGE  174 (182)
Q Consensus       165 ~~~~~~~l~~  174 (182)
                      + .++++|.+
T Consensus       195 ~-~~~~~l~~  203 (233)
T PRK06031        195 E-RWRESLAA  203 (233)
T ss_pred             c-cHHHHHHh
Confidence            5 67766653

>COG0461 PyrE Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=99.88  E-value=9.6e-22  Score=153.20  Aligned_cols=135  Identities=26%  Similarity=0.396  Sum_probs=111.6

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHhcCC-CccEEEeeCCCChhhHHHHHHHhC-CC-eEeeeccCCCCCceeeeeeeee
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERYKDK-NISVVAGIEARGFIFGPPIALAIG-AK-FVPMRKPKKLPGEVISEEYSLE  108 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~~-~~d~Iv~v~~~G~~~a~~la~~l~-vp-~~~~rk~~~~~~~~~~~~~~~~  108 (182)
                      +|+|+..+..+|+..+.++..++...++. ++|+|+|++.+|+|+|+.+|..++ .| +.+.||..|            +
T Consensus        31 yY~d~~~~~~~p~~~~~i~~~~a~~~~~~~~~d~v~G~a~ggiP~A~~~a~~l~~~~~~~~~Rke~K------------~   98 (201)
T COG0461          31 YYVDLRLFLTGPELLQLIAFALAEIIKEALEFDVVAGPALGGIPLAAATALALAHLPPMAYVRKEAK------------D   98 (201)
T ss_pred             eEEecccccCCHHHHHHHHHHHHHHhhccCCCcEEEeccccchHHHHHHHHHhccCCcEEEEeceec------------c
Confidence            79999999999999999999999888874 899999999999999999999993 22 777887654            3


Q ss_pred             ccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCccccc
Q 030139          109 YGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV  181 (182)
Q Consensus       109 ~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~  181 (182)
                      +|.+...  .+...+|++|++|||++|||+++.++++.|+++|+.+++++|++++.+ .+.+.+.  +.++++|+
T Consensus        99 hG~~~~i--eG~~~~G~kVvvVEDViTTG~Si~eai~~l~~~G~~V~gv~~ivDR~~-~~~~~~~~~g~~~~sl~  170 (201)
T COG0461          99 HGTGGLI--EGGEVKGEKVVVVEDVITTGGSILEAVEALREAGAEVVGVAVIVDRQS-GAKEVLKEYGVKLVSLV  170 (201)
T ss_pred             CCCccee--EecCCCCCEEEEEEecccCCHhHHHHHHHHHHcCCeEEEEEEEEecch-hHHHHHHhcCCceEEEe
Confidence            3443211  234459999999999999999999999999999999999999999963 5555555  35666665

>COG0856 Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism]

Probab=99.86  E-value=7.9e-21  Score=142.91  Aligned_cols=139  Identities=23%  Similarity=0.302  Sum_probs=113.9

Q ss_pred             ceEEechhhhcCHHHHHHHHHHHHHH-hcC--CCccEEEeeCCCChhhHHHHHHHhCCCeEeee--ccCCCCCceeeeee
Q 030139           31 IMFQDITTLLLDTKAFRDTIDLFVER-YKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMR--KPKKLPGEVISEEY  105 (182)
Q Consensus        31 ~~~~d~~~l~~~~~~~~~~~~~la~~-~~~--~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~r--k~~~~~~~~~~~~~  105 (182)
                      ..|+||+++-..+.-++.++..|+.. +..  .++|+|+|+...|+|+|+++|..||..+...+  |.++..+.      
T Consensus        53 Di~i~W~siG~s~sRl~~Is~am~Dm~m~~~~~evDvVvGIa~sGvPlAtmvA~elg~elaiY~PrK~~~de~~------  126 (203)
T COG0856          53 DIKIDWRSIGKSGSRLRYISEAMADMIMEKVSFEVDVVVGIAISGVPLATMVAYELGKELAIYHPRKHRKDEGA------  126 (203)
T ss_pred             ceEEechhhccchHHHHHHHHHHHHHHHHhccceeEEEEEEeecCccHHHHHHHHhCCceEEEecccccccccC------
Confidence            47899999999999999999999983 332  58999999999999999999999999886654  33332111      


Q ss_pred             eeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccccC
Q 030139          106 SLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS  182 (182)
Q Consensus       106 ~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l~~  182 (182)
                          +.+...-+....+.||+|+||||++|||+|+.++++.|++.|++.+-+.+++++   .|.+.+++.|+.||++
T Consensus       127 ----~~~G~iS~NFa~V~gK~cvIVDDvittG~Ti~E~Ie~lke~g~kpv~v~VL~dK---~G~dei~gvPi~sLlr  196 (203)
T COG0856         127 ----GKGGSISSNFASVEGKRCVIVDDVITTGSTIKETIEQLKEEGGKPVLVVVLADK---KGVDEIEGVPVESLLR  196 (203)
T ss_pred             ----CcCceeecccccccCceEEEEecccccChhHHHHHHHHHHcCCCcEEEEEEEcc---CCcccccCcchHHhhe
Confidence                111111111245899999999999999999999999999999999999999998   6899999999999975

>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate

Probab=99.85  E-value=1.9e-20  Score=135.68  Aligned_cols=122  Identities=30%  Similarity=0.435  Sum_probs=93.3

Q ss_pred             hhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEE
Q 030139           38 TLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVME  115 (182)
Q Consensus        38 ~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~  115 (182)
                      +++.+++.++.+++.|++++.+  .++|.|+|++++|+++|..+|..++.|+....+...... . ............+.
T Consensus         2 ~i~~~~~~~~~~~~~la~~i~~~~~~~~~ivgi~~~G~~~a~~la~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~   79 (125)
T PF00156_consen    2 KIILSPEQIEALAERLAEQIKESGFDFDVIVGIPRGGIPLAAALARALGIPLVFVRKRKSYYP-G-SDKTSREKNNQELF   79 (125)
T ss_dssp             EEEEBHHHHHHHHHHHHHHHHHHTTTSSEEEEETTTTHHHHHHHHHHHTHEEEEEEEEEEEES-E-EEEEEEETEEEEEE
T ss_pred             EEEEcHHHHHHHHHHHHHHHHHhCCCCCEEEeehhccHHHHHHHHHHhCCCccceeeeecccc-c-chhhhhccCceEEe
Confidence            4677899999999999999876  567889999999999999999999999987654321000 0 00000011111222


Q ss_pred             EEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEE
Q 030139          116 MHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI  161 (182)
Q Consensus       116 l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~  161 (182)
                      .......+|++||||||+++||+|+.++++.|+++|++++++++++
T Consensus        80 ~~~~~~~~gk~vliVDDvi~tG~Tl~~~~~~L~~~g~~~v~~~vl~  125 (125)
T PF00156_consen   80 IIDKEDIKGKRVLIVDDVIDTGGTLKEAIELLKEAGAKVVGVAVLV  125 (125)
T ss_dssp             EEESSSGTTSEEEEEEEEESSSHHHHHHHHHHHHTTBSEEEEEEEE
T ss_pred             ecccccccceeEEEEeeeEcccHHHHHHHHHHHhCCCcEEEEEEEC
Confidence            2334568999999999999999999999999999999999999875

Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....

>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional

Probab=99.72  E-value=1.2e-16  Score=123.71  Aligned_cols=118  Identities=17%  Similarity=0.227  Sum_probs=86.1

Q ss_pred             hhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeE--eeeccCCCCCceeeeeeeeecccee
Q 030139           39 LLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVISEEYSLEYGKDV  113 (182)
Q Consensus        39 l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~--~~rk~~~~~~~~~~~~~~~~~~~~~  113 (182)
                      ++.+++.++...+.|+.++.+   .+.++|||+..+|+.+|..+|+.+++|+.  .+++.+....+.        .....
T Consensus        15 ~~~s~~~i~~~i~~la~~i~~~~~~~~~viV~i~~gg~~~A~~La~~l~~~~~~~~l~~~~~~~~~~--------~~~~~   86 (181)
T PRK09162         15 CLVSAAEVEAAIDRMADEITADLADENPLVLCVMGGGLVFTGQLLPRLDFPLEFDYLHATRYRNETT--------GGELV   86 (181)
T ss_pred             EeecHHHHHHHHHHHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHHcCCCcccCEEEEEecCCCcc--------CCcee
Confidence            455666777777777776653   34579999999999999999999999863  233222111100        00111


Q ss_pred             EEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          114 MEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       114 ~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                      +.+......+|++||||||++|||+|+.++++.|++.|++.|.+++++.+.
T Consensus        87 ~~~~~~~~v~gk~VLIVDDIidTG~Tl~~~~~~Lk~~Ga~~V~~avL~~k~  137 (181)
T PRK09162         87 WKVKPRESLKGRTVLVVDDILDEGHTLAAIRDRCLEMGAAEVYSAVLVDKT  137 (181)
T ss_pred             EecCCCCCCCCCEEEEEccccCcHHHHHHHHHHHHhCCCCEEEEEEEEEcC
Confidence            121112347899999999999999999999999999999999999999885

>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional

Probab=99.72  E-value=7.9e-17  Score=133.76  Aligned_cols=108  Identities=23%  Similarity=0.273  Sum_probs=87.9

Q ss_pred             CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHH
Q 030139           61 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTL  140 (182)
Q Consensus        61 ~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl  140 (182)
                      +.++|++++.||..++..+|+.+|+|+.+++|.+...++            ..+....+..++|++|+||||++|||+|+
T Consensus       160 ~~~vVVsPd~g~~~~a~~la~~l~~~~~~~~K~R~~~~~------------~~~~~~~~~~v~Gr~vIIVDDIidTG~Tl  227 (301)
T PRK07199        160 PRPLLIGPDEESEQWVAAVAERAGAPHAVLRKTRHGDRD------------VEISLPDAAPWAGRTPVLVDDIVSTGRTL  227 (301)
T ss_pred             CCcEEEEeCCChHHHHHHHHHHhCCCEEEEEEEecCCCe------------EEEEeccCcccCCCEEEEEecccCcHHHH
Confidence            457999999999999999999999999988876532111            01111113347899999999999999999


Q ss_pred             HHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139          141 SAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL  180 (182)
Q Consensus       141 ~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l  180 (182)
                      .++++.|++.||+.+.++++|..+..++.+++.+.++..+
T Consensus       228 ~~aa~~Lk~~GA~~V~~~~tHgvfs~~a~~~l~~~~i~~i  267 (301)
T PRK07199        228 IEAARQLRAAGAASPDCVVVHALFAGDAYSALAAAGIARV  267 (301)
T ss_pred             HHHHHHHHHCCCcEEEEEEEeeeCChHHHHHHHhCCCCEE
Confidence            9999999999999999999999998888888877665443

>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase

Probab=99.71  E-value=3.2e-16  Score=119.79  Aligned_cols=119  Identities=18%  Similarity=0.210  Sum_probs=86.8

Q ss_pred             hcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCceeeeeeeeeccceeE
Q 030139           40 LLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLEYGKDVM  114 (182)
Q Consensus        40 ~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~~~~~~~~~~~~~~~~  114 (182)
                      +.+++.++..++.||.++.+   .+.++|+|+.+||+++|..+++.|++|...  +..++..+...       ..+....
T Consensus         2 lis~~~i~~~i~~lA~~I~~~~~~~~~vvv~i~~GG~~~a~~l~~~L~~~~~v~~i~~~~Y~~~~~-------~~~~~~~   74 (166)
T TIGR01203         2 LIPEEQIKARIAELAKQITEDYAGKPLVLLCVLKGSFPFFADLIRYIAVPVQVDFMAVSSYGNGMQ-------SSGDVKI   74 (166)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHcCCCCeEEEEEccCCHHHHHHHHHhcCCCceeeEEEEeeccCCCc-------ccCceEE
Confidence            45777888888888877754   256899999999999999999999987532  32111100000       0011111


Q ss_pred             EEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139          115 EMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus       115 ~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      ........+|++||||||+++||.|+.++++.|++.|+..+.+++++.++.
T Consensus        75 ~~~~~~~~~gk~vlivDDii~TG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~  125 (166)
T TIGR01203        75 LKDLDLSIKGKDVLIVEDIVDTGLTLQYLLDLLKARKPKSLKIVTLLDKPS  125 (166)
T ss_pred             ecCCCCCCCCCEEEEEeeeeCcHHHHHHHHHHHHHCCCCEEEEEEEEecCc
Confidence            111123478999999999999999999999999999999999999999863

Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.

>PLN02238 hypoxanthine phosphoribosyltransferase

Probab=99.71  E-value=2.9e-16  Score=122.40  Aligned_cols=120  Identities=22%  Similarity=0.304  Sum_probs=91.1

Q ss_pred             hhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCC---CeE--eeeccCCCCCceeeeeeeee
Q 030139           37 TTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGA---KFV--PMRKPKKLPGEVISEEYSLE  108 (182)
Q Consensus        37 ~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~v---p~~--~~rk~~~~~~~~~~~~~~~~  108 (182)
                      ..++.+++.++...+.||.++.+   .+.++|+|+..||+++|..+++.+++   |+.  +++..+...+         .
T Consensus         8 ~~~lis~~~I~~~i~~lA~~I~~~~~~~~~vivgi~~Gg~~fa~~L~~~L~~~~~~~~i~fi~~~sy~~~---------~   78 (189)
T PLN02238          8 EKVLWTAEDISARVAELAAQIASDYAGKSPVVLGVATGAFMFLADLVRAIQPLPRGLTVDFIRASSYGGG---------T   78 (189)
T ss_pred             cEEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEEccCCHHHHHHHHHHhCccCCCeEEEEEEeeecCCC---------c
Confidence            35677888888888888887754   25689999999999999999999998   653  3443321100         0


Q ss_pred             ccceeEEEEc---cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139          109 YGKDVMEMHV---GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus       109 ~~~~~~~l~~---~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      ...+...+..   ....+|++||||||++|||.||.++++.|++.|++.+.++|++++..
T Consensus        79 ~~~g~~~i~~~~~~~~v~gk~VliVDDIidTG~Tl~~~~~~l~~~g~~~v~~avL~dK~~  138 (189)
T PLN02238         79 ESSGVAKVSGADLKIDVKGKHVLLVEDIVDTGNTLSALVAHLEAKGAASVSVCALLDKRA  138 (189)
T ss_pred             cccCceeEecCCCCCCCCCCEEEEEecccchHHHHHHHHHHHHhCCCCEEEEEEEEECCc
Confidence            0111222222   23479999999999999999999999999999999999999999863

>PRK00934 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.69  E-value=2.6e-16  Score=129.84  Aligned_cols=117  Identities=25%  Similarity=0.332  Sum_probs=90.7

Q ss_pred             HHHHHHHhcC-CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEE-ccccCCCCeE
Q 030139           50 IDLFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMH-VGAVQAGERA  127 (182)
Q Consensus        50 ~~~la~~~~~-~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~gk~V  127 (182)
                      +..+++++.. .+.++|++++.||+++|..+|+.+++|+.+++|.+..+..              ..+. .....+|++|
T Consensus       142 ~~~la~~i~~~~~~~vvv~pd~Ga~~~a~~lA~~l~~~~~~i~k~r~~~~~--------------~~~~~~~~~v~Gk~V  207 (285)
T PRK00934        142 APLIAEYIGDKLDDPLVLAPDKGALELAKEAAEILGCEYDYLEKTRISPTE--------------VEIAPKNLDVKGKDV  207 (285)
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCchHHHHHHHHHHhCCCEEEEEEEecCCCe--------------EEEeccccccCCCEE
Confidence            3444444432 3445999999999999999999999999888776532111              1111 1224789999


Q ss_pred             EEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139          128 LIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL  180 (182)
Q Consensus       128 llVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l  180 (182)
                      +||||+++||+|+.++++.|++.||+.+.++++|..+..++.+++.+.++..+
T Consensus       208 lIVDDIi~TG~Tl~~aa~~Lk~~GA~~V~~~~~H~i~~~~a~~~l~~~~i~~i  260 (285)
T PRK00934        208 LIVDDIISTGGTMATAIKILKEQGAKKVYVACVHPVLVGDAILKLYNAGVDEI  260 (285)
T ss_pred             EEEcCccccHHHHHHHHHHHHHCCCCEEEEEEEeeccCcHHHHHHHhCCCCEE
Confidence            99999999999999999999999999999999999888788888877665443

>PRK02269 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.68  E-value=5.6e-16  Score=129.67  Aligned_cols=109  Identities=17%  Similarity=0.258  Sum_probs=87.3

Q ss_pred             CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHH
Q 030139           61 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTL  140 (182)
Q Consensus        61 ~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl  140 (182)
                      +..+||+|+.||..+|..+|+.+|+|+.+.+|++......         ....+.+  ....+|++|+||||++|||+|+
T Consensus       165 ~~~vvVsPd~G~~~~A~~lA~~lg~~~~~~~k~r~~~~~~---------~~~~~~~--~gdv~Gr~viIVDDIidTG~Tl  233 (320)
T PRK02269        165 DDVVVVSPDHGGVTRARKLAQFLKTPIAIIDKRRSVDKMN---------TSEVMNI--IGNVKGKKCILIDDMIDTAGTI  233 (320)
T ss_pred             CCcEEEEECccHHHHHHHHHHHhCCCEEEEEecccCCCCc---------eeEEEEe--ccccCCCEEEEEeeecCcHHHH
Confidence            4469999999999999999999999998877754311000         0011122  1237899999999999999999


Q ss_pred             HHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139          141 SAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL  180 (182)
Q Consensus       141 ~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l  180 (182)
                      .++++.|++.||+.|.++|.|..+..++.+++.+.++..+
T Consensus       234 ~~aa~~Lk~~GA~~V~~~~tHglf~~~a~~~l~~~~i~~i  273 (320)
T PRK02269        234 CHAADALAEAGATEVYASCTHPVLSGPALDNIQKSAIEKL  273 (320)
T ss_pred             HHHHHHHHHCCCCEEEEEEECcccCchHHHHHHhCCCCEE
Confidence            9999999999999999999999998888888877666554

>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated

Probab=99.68  E-value=9.2e-16  Score=116.13  Aligned_cols=111  Identities=21%  Similarity=0.275  Sum_probs=85.0

Q ss_pred             hhcCHHHHHHHHHHHHHHhcCC-CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEE
Q 030139           39 LLLDTKAFRDTIDLFVERYKDK-NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMH  117 (182)
Q Consensus        39 l~~~~~~~~~~~~~la~~~~~~-~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~  117 (182)
                      ++.+++.++..++.|+.++.+. ++|+|+|+++||+.+|..++++|++|+....+-         ..|..+ ..+.+.+.
T Consensus         8 ~~is~~~i~~~i~~la~~I~~~~~~d~vvgv~~GG~~fa~~L~~~L~~~~v~~i~~---------ssY~~~-~~~~~~~~   77 (156)
T PRK09177          8 FPVSWDQLHRDARALAWRLLPAGQWKGIIAVTRGGLVPAAILARELGIRLVDTVCI---------SSYDHD-NQGELKVL   77 (156)
T ss_pred             EEcCHHHHHHHHHHHHHHHHhhCCCCEEEEEecCCeehHHHHHHHcCCCceeEEEE---------EEECCC-cCCcEEEe
Confidence            4568899999999999998753 589999999999999999999999996422111         112111 12233333


Q ss_pred             ccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          118 VGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       118 ~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                      .+...+|++||||||+++||.|+.++.+.+.+     +.+++++.++
T Consensus        78 ~~~~~~gk~VLIVDDIiDTG~Tl~~v~~~l~~-----v~~a~l~~K~  119 (156)
T PRK09177         78 KRAEGDGEGFLVVDDLVDTGGTARAVREMYPK-----AHFATVYAKP  119 (156)
T ss_pred             cCCCcCcCEEEEEeeeeCCHHHHHHHHHHHhh-----CCEEEEEECc
Confidence            34457899999999999999999999999974     6788888886

>PRK08525 amidophosphoribosyltransferase; Provisional

Probab=99.67  E-value=4.5e-16  Score=135.43  Aligned_cols=135  Identities=14%  Similarity=0.153  Sum_probs=98.2

Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCe--EeeeccCCCCCceeeeeeeeeccceeEEEEc-cc
Q 030139           44 KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEYGKDVMEMHV-GA  120 (182)
Q Consensus        44 ~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~--~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~-~~  120 (182)
                      +....+++.|++.+.. +.|+|+++|.+|+++|..+|+.+|+|+  ...||++. .........+.......+.+.. ..
T Consensus       259 ~~R~~~G~~La~~~~~-~~d~Vv~vPd~g~~~A~~~A~~lgip~~~~l~rk~~~-~r~~i~~~qr~rn~~~~~~~~~~~~  336 (445)
T PRK08525        259 EVRKKMGEELAKKFPI-KADFVVPVPDSGVPAAIGYAQESGIPFEMAIVRNHYV-GRTFIEPTQEMRNLKVKLKLNPMSK  336 (445)
T ss_pred             HHHHHHHHHHHHHhcc-cCCeEEECCchHHHHHHHHHHHhCCCccceEEEeecc-ccccCCHHHHHHhhheeEEeccccc
Confidence            4566889999988753 678999999999999999999999998  44554421 1111110000001112233222 23


Q ss_pred             cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139          121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL  180 (182)
Q Consensus       121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l  180 (182)
                      .++||+|+||||++|||+||.++++.|+++||+.|++.+.|.....+....++..+...|
T Consensus       337 ~v~gK~VlLVDDvitTG~Tl~~a~~~Lr~aGA~~V~v~~~hp~~~~~~~~~i~~~~~~~l  396 (445)
T PRK08525        337 VLEGKRIVVIDDSIVRGTTSKKIVSLLRAAGAKEIHLRIACPEIKFPCYYGIDTPTFEEL  396 (445)
T ss_pred             ccCCCeEEEEecccCcHHHHHHHHHHHHhcCCCEEEEEEECCCcCCchhhhCcCCChhhE
Confidence            378999999999999999999999999999999999999999887787777766555444

>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional

Probab=99.67  E-value=1.3e-15  Score=117.61  Aligned_cols=119  Identities=15%  Similarity=0.231  Sum_probs=89.2

Q ss_pred             hhhcCHHHHHHHHHHHHHHhcC-----CCccEEEeeCCCChhhHHHHHHHhCCCeE--eeeccCCCCCceeeeeeeeecc
Q 030139           38 TLLLDTKAFRDTIDLFVERYKD-----KNISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVISEEYSLEYG  110 (182)
Q Consensus        38 ~l~~~~~~~~~~~~~la~~~~~-----~~~d~Iv~v~~~G~~~a~~la~~l~vp~~--~~rk~~~~~~~~~~~~~~~~~~  110 (182)
                      .++.+.+.++...+.||.++.+     ....+++|+.+||+.+|..+++.++.|+.  +++..+...+.         ..
T Consensus         6 ~~l~~~~~i~~~i~~lA~~I~~~~~~~~~~~vvvgI~~Gg~~fa~~L~~~L~~~~~v~~l~~ssY~~~~---------~~   76 (178)
T PRK15423          6 EVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASSYGSGM---------ST   76 (178)
T ss_pred             EEecCHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCChHHHHHHHHHhCCCcceeEEEEEEecCCC---------cc
Confidence            4566788888888888776643     12479999999999999999999999853  44433221110         00


Q ss_pred             ceeEEEEc--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139          111 KDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus       111 ~~~~~l~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      .+...+..  ....+||+||||||+++||.||.++.+.|++.|++.+.++++++++.
T Consensus        77 ~~~v~i~~~~~~~v~gk~VLlVDDIiDTG~TL~~l~~~l~~~~~~~v~~avL~~K~~  133 (178)
T PRK15423         77 TRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPS  133 (178)
T ss_pred             cCceEEecCCCCCCCCCEEEEEeeecCchHHHHHHHHHHHhCCCCEEEEEEEEECCC
Confidence            11222222  23578999999999999999999999999999999999999999973

>COG1040 ComFC Predicted amidophosphoribosyltransferases [General function prediction only]

Probab=99.66  E-value=2.4e-16  Score=125.87  Aligned_cols=120  Identities=20%  Similarity=0.240  Sum_probs=83.8

Q ss_pred             CHHHHHHHHHHHHHHhc--CCCccEEEeeC-------CCChhhHHHHHHHhCC----CeEeeeccCCCCCceeeeeeeee
Q 030139           42 DTKAFRDTIDLFVERYK--DKNISVVAGIE-------ARGFIFGPPIALAIGA----KFVPMRKPKKLPGEVISEEYSLE  108 (182)
Q Consensus        42 ~~~~~~~~~~~la~~~~--~~~~d~Iv~v~-------~~G~~~a~~la~~l~v----p~~~~rk~~~~~~~~~~~~~~~~  108 (182)
                      +....+.+++.|+..+.  ..++|.||+||       .+||+++..+|+.++.    |+...+.+.+.++...+..-+..
T Consensus        90 ~~~l~~~la~~l~~~~~~~~~~~~~iVpVPls~~r~~~RGFNQ~~~la~~l~~~~~~~~~~~r~k~~~~q~~l~~~~rr~  169 (225)
T COG1040          90 DLDLAKLLARLLAKALDDFLEKPDLIVPVPLSPSRLLERGFNQSELLARALARRLGKPIALRRVKDTSPQQGLKALERRR  169 (225)
T ss_pred             chhHHHHHHHHHHHHHhhccccCCeEEEecCCHHHHHHcCCCHHHHHHHHHHHHhCchHHHHHHhccccccccchHHHHH
Confidence            46677778888887776  35799999999       6899999999998854    44333333332322222111111


Q ss_pred             ccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEe
Q 030139          109 YGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIE  162 (182)
Q Consensus       109 ~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~  162 (182)
                      ..++.|.+..+. ...++|+|||||+|||+|+.++.+.|++.|++.|.++++..
T Consensus       170 nl~~aF~~~~~~-~~~~~vlLvDDV~TTGaTl~~~~~~L~~~Ga~~v~~~~lar  222 (225)
T COG1040         170 NLKGAFRLKKGI-EEPKNVLLVDDVYTTGATLKEAAKLLREAGAKRVFVLTLAR  222 (225)
T ss_pred             hccCCeecCCCC-CCCCeEEEEecccccHHHHHHHHHHHHHcCCceEEEEEEEe
Confidence            223456554332 22389999999999999999999999999999999998865

>PRK04923 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.65  E-value=2.3e-15  Score=125.81  Aligned_cols=107  Identities=22%  Similarity=0.251  Sum_probs=87.4

Q ss_pred             CccEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHH
Q 030139           61 NISVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGT  139 (182)
Q Consensus        61 ~~d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~T  139 (182)
                      +..+||+|+.||..+|..+|+.++ .|+.++.|.+.....           ...+.+  ...++||+|+||||+++||+|
T Consensus       166 ~~~vVVsPD~Ga~~rA~~lA~~L~~~~~~~~~K~R~~~~~-----------~~~~~~--~gdv~Gr~viIVDDIidTG~T  232 (319)
T PRK04923        166 DNLIVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPRANV-----------ATVMNI--IGDVQGKTCVLVDDLVDTAGT  232 (319)
T ss_pred             CCCEEEEECCchHHHHHHHHHHcCCCCEEEeccccCCCCc-----------eEEEec--ccCCCCCEEEEEecccCchHH
Confidence            445999999999999999999998 899988876642110           011111  134799999999999999999


Q ss_pred             HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139          140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL  180 (182)
Q Consensus       140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l  180 (182)
                      +.++++.|++.||..|.++|.|..+..++.+++.+.++..+
T Consensus       233 l~~aa~~Lk~~GA~~V~~~~THgvfs~~a~~~l~~s~i~~i  273 (319)
T PRK04923        233 LCAAAAALKQRGALKVVAYITHPVLSGPAVDNINNSQLDEL  273 (319)
T ss_pred             HHHHHHHHHHCCCCEEEEEEECcccCchHHHHHhhCCCCEE
Confidence            99999999999999999999999998888888877665544

>TIGR00201 comF comF family protein

Probab=99.64  E-value=7.7e-16  Score=120.01  Aligned_cols=118  Identities=19%  Similarity=0.253  Sum_probs=78.6

Q ss_pred             CHHHHHHHHHHHHHHhcC---CCccEEEeeC-------CCChhhHHHHHHHhCCC---eE--eeeccCCCCCceeeeeee
Q 030139           42 DTKAFRDTIDLFVERYKD---KNISVVAGIE-------ARGFIFGPPIALAIGAK---FV--PMRKPKKLPGEVISEEYS  106 (182)
Q Consensus        42 ~~~~~~~~~~~la~~~~~---~~~d~Iv~v~-------~~G~~~a~~la~~l~vp---~~--~~rk~~~~~~~~~~~~~~  106 (182)
                      +....+.++..|+..+..   ..+|.|++||       .+||+++..+|+.++..   +.  ..+.+. .++...+...+
T Consensus        57 ~~~l~~~l~~~l~~~~~~~~~~~~~~ivpVP~~~~r~~~RGfnq~~~la~~l~~~~~~~~~~l~r~~~-~~Q~~l~~~~R  135 (190)
T TIGR00201        57 QAEIIRALASLLSLTVSKAYRDLPDVIVPVPLSKEREWRRGFNQADLLAQCLSRWLFNYHNIVIRLNN-ETQSKLKATLR  135 (190)
T ss_pred             ChHHHHHHHHHHHHHHHhhccCCCCEEEeCCCCHHHHHHhCCCHHHHHHHHHHHHhCCCcceEEEecc-cccccCCHHHH
Confidence            566777788877765543   2368999999       59998888887776422   11  122222 22211111111


Q ss_pred             eeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEE
Q 030139          107 LEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI  161 (182)
Q Consensus       107 ~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~  161 (182)
                      ....++.|.+... ..+|++|||||||+|||+|+.++.+.|++.|+..|.++++.
T Consensus       136 ~~n~~~~f~~~~~-~~~~~~vllvDDV~TTGaTl~~~~~~L~~~Ga~~V~~~~la  189 (190)
T TIGR00201       136 FLNLENAFDLKNN-SFQGRNIVLVDDVVTTGATLHEIARLLLELGAASVQVWTLA  189 (190)
T ss_pred             HHHHhCcEEccCC-CCCCCEEEEEeeeeccHHHHHHHHHHHHHcCCCEEEEEEEE
Confidence            1112344555322 46799999999999999999999999999999999998874

This protein is found in species that do (Bacillus subtilis, Haemophilus influenzae) or do not (E. coli, Borrelia burgdorferi) have described systems for natural transformation with exogenous DNA. It is involved in competence for transformation in Bacillus subtilis.

>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]

Probab=99.64  E-value=1.8e-15  Score=124.73  Aligned_cols=105  Identities=25%  Similarity=0.317  Sum_probs=85.4

Q ss_pred             cEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHH
Q 030139           63 SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSA  142 (182)
Q Consensus        63 d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~  142 (182)
                      .+||+|+.||...|..+|+.||.|+.++.|+|. +.....         ....+  ...++||+|+||||+++||+|+..
T Consensus       165 ~vVVSPD~Ggv~RAr~~A~~L~~~~a~i~K~R~-~~~~~v---------~~~~~--~gdV~gk~~iiVDDiIdTgGTi~~  232 (314)
T COG0462         165 PVVVSPDKGGVKRARALADRLGAPLAIIDKRRD-SSPNVV---------EVMNL--IGDVEGKDVVIVDDIIDTGGTIAK  232 (314)
T ss_pred             cEEECCCccHHHHHHHHHHHhCCCEEEEEEeec-CCCCeE---------EEeec--ccccCCCEEEEEeccccccHHHHH
Confidence            699999999999999999999999988888763 111000         00111  234899999999999999999999


Q ss_pred             HHHHHHhcCCeEEEEEEEEecCCcccccccCCCCccc
Q 030139          143 AIRLLERVGVHVVECACVIELPELKGRERLGEKPLFV  179 (182)
Q Consensus       143 ~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~  179 (182)
                      ++++|++.||+.|.++|.|..+.+.+.+++....+..
T Consensus       233 Aa~~Lk~~GAk~V~a~~tH~vfs~~a~~~l~~~~i~~  269 (314)
T COG0462         233 AAKALKERGAKKVYAAATHGVFSGAALERLEASAIDE  269 (314)
T ss_pred             HHHHHHHCCCCeEEEEEEchhhChHHHHHHhcCCCCE
Confidence            9999999999999999999999877788877654443

>PRK01259 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.64  E-value=3e-15  Score=124.78  Aligned_cols=105  Identities=21%  Similarity=0.264  Sum_probs=85.5

Q ss_pred             CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHH
Q 030139           60 KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGT  139 (182)
Q Consensus        60 ~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~T  139 (182)
                      .+..+|++++.||+.+|..+|+.+|+|+.+++|.++.++.           ...+.+  ....+|++|+||||+++||+|
T Consensus       157 ~~~~vvv~pd~Gg~~~A~~la~~Lg~~~~~~~k~r~~~~~-----------~~~~~~--~~~~~g~~vliVDDii~TG~T  223 (309)
T PRK01259        157 LENLVVVSPDVGGVVRARALAKRLDADLAIIDKRRPRANV-----------SEVMNI--IGDVEGRDCILVDDMIDTAGT  223 (309)
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHhCCCEEEEEeeccccee-----------EEEEee--cccCCCCEEEEEecccCcHHH
Confidence            4667999999999999999999999999888766532111           011122  123789999999999999999


Q ss_pred             HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCc
Q 030139          140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPL  177 (182)
Q Consensus       140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~  177 (182)
                      +.++++.|++.|++.+.++++|..+..++.+++.+.++
T Consensus       224 ~~~a~~~l~~~Ga~~v~~~~tH~i~~~~a~~~l~~~~~  261 (309)
T PRK01259        224 LCKAAEALKERGAKSVYAYATHPVLSGGAIERIENSVI  261 (309)
T ss_pred             HHHHHHHHHccCCCEEEEEEEeeeCChHHHHHHhcCCC
Confidence            99999999999999999999999988888888766443

>PRK02458 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.63  E-value=3.5e-15  Score=124.95  Aligned_cols=107  Identities=20%  Similarity=0.233  Sum_probs=86.9

Q ss_pred             CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHH
Q 030139           61 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTL  140 (182)
Q Consensus        61 ~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl  140 (182)
                      +..+||+|+.||..+|..+|+.+++|+.++++.+....           ... ..+  ...++|++|+||||+++||+|+
T Consensus       169 ~~~vvV~pd~Ga~~~A~~la~~L~~~~~~~~~~r~~~~-----------~~~-~~i--~gdV~gk~viIVDDIidTG~Tl  234 (323)
T PRK02458        169 SDVVVVSPKNSGIKRARSLAEYLDAPIAIIDYAQDDSE-----------REE-GYI--IGDVAGKKAILIDDILNTGKTF  234 (323)
T ss_pred             CceEEEEECCChHHHHHHHHHHhCCCEEEEEEecCCCc-----------cee-ecc--ccccCCCEEEEEcceeCcHHHH
Confidence            34599999999999999999999999987765442110           000 011  1347999999999999999999


Q ss_pred             HHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCccccc
Q 030139          141 SAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV  181 (182)
Q Consensus       141 ~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l~  181 (182)
                      .++++.|++.||..|.++|.|..+..++.++|.+.++..++
T Consensus       235 ~~aa~~Lk~~GA~~V~~~~tHgif~~~a~~~l~~s~i~~iv  275 (323)
T PRK02458        235 AEAAKIVEREGATEIYAVASHGLFAGGAAEVLENAPIKEIL  275 (323)
T ss_pred             HHHHHHHHhCCCCcEEEEEEChhcCchHHHHHhhCCCCEEE
Confidence            99999999999999999999999988888888887766553

>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional

Probab=99.62  E-value=6.6e-15  Score=113.50  Aligned_cols=120  Identities=22%  Similarity=0.301  Sum_probs=86.1

Q ss_pred             hhhcCHHHHHHHHHHHHHHhcC----CCccEEEeeCCCChhhHHHHHHHh----CCCe--EeeeccCCCCCceeeeeeee
Q 030139           38 TLLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAI----GAKF--VPMRKPKKLPGEVISEEYSL  107 (182)
Q Consensus        38 ~l~~~~~~~~~~~~~la~~~~~----~~~d~Iv~v~~~G~~~a~~la~~l----~vp~--~~~rk~~~~~~~~~~~~~~~  107 (182)
                      ..+.+++.++..++.|+.++.+    .+.++|+|+.+||+++|..+++.+    ++|+  ..++..+...+.      . 
T Consensus         4 ~~l~s~~~i~~~i~~la~~i~~~~~~~~~~viv~il~gG~~~a~~La~~L~~~~~~~~~~~~l~~~~y~~~~------~-   76 (176)
T PRK05205          4 KEILDAEALRRALTRIAHEIIERNKGLDNLVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDL------T-   76 (176)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEccCCHHHHHHHHHHHHHHcCCCCccceEEEEEeecCc------c-
Confidence            3567889999999999987754    257899999999999999999999    5443  333221110000      0 


Q ss_pred             ecccee-EE-EEccccCCCCeEEEEecccCchHHHHHHHHHHHhcC-CeEEEEEEEEecC
Q 030139          108 EYGKDV-ME-MHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP  164 (182)
Q Consensus       108 ~~~~~~-~~-l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~g-a~~v~v~~l~~~~  164 (182)
                      ..+... .. .......+|++||||||+++||+||.++++.|++.| ++.+.+++++++.
T Consensus        77 ~~~~~~~~~~~~l~~~v~gr~VLIVDDIidTG~Tl~~~~~~L~~~G~~~~v~~avL~~K~  136 (176)
T PRK05205         77 KKGLHPQVKPTDIPFDIEGKRVILVDDVLYTGRTIRAALDALFDYGRPARVQLAVLVDRG  136 (176)
T ss_pred             ccCcccccccccCCCCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCcEEEEEEEEECC
Confidence            000000 10 001224789999999999999999999999999998 7899999999973

>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional

Probab=99.62  E-value=1.3e-14  Score=114.68  Aligned_cols=120  Identities=14%  Similarity=0.173  Sum_probs=89.6

Q ss_pred             chhhhcCHHHHHHHHHHHHHHhcC-C--------CccEEEeeCCCChhhHHHHHHHhC---CCeEe--eeccCCCCCcee
Q 030139           36 ITTLLLDTKAFRDTIDLFVERYKD-K--------NISVVAGIEARGFIFGPPIALAIG---AKFVP--MRKPKKLPGEVI  101 (182)
Q Consensus        36 ~~~l~~~~~~~~~~~~~la~~~~~-~--------~~d~Iv~v~~~G~~~a~~la~~l~---vp~~~--~rk~~~~~~~~~  101 (182)
                      ...++.+++.++...+.||.++.+ +        ++++++|+.+||+++|..|+++|+   +|+..  ++-.        
T Consensus        23 ~~~~lis~e~I~~~i~~LA~~I~~~~~~~~~~~~~~~vivgVlkGg~~fa~dL~r~L~~~~~~~~vdfi~vs--------   94 (211)
T PTZ00271         23 SAHTLVTQEQVWAATAKCAKKIAEDYRSFKLTTENPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICAS--------   94 (211)
T ss_pred             cccEecCHHHHHHHHHHHHHHHHHHhhhccccCCCCeEEEEEcCCCHHHHHHHHHHhcccCCCeeEEEEEEE--------
Confidence            345677899888888888877654 2        367899999999999999999996   66422  2211        


Q ss_pred             eeeeee-eccceeEEEEc--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139          102 SEEYSL-EYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus       102 ~~~~~~-~~~~~~~~l~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                        +|.. ....+.+.+..  ...++||+|||||||++||.||.++++.|++.+++.+.++++++++.
T Consensus        95 --sY~~~~~s~g~~~i~~~~~~~i~gk~VLIVDDIvDTG~TL~~v~~~l~~~~p~svk~avL~dK~~  159 (211)
T PTZ00271         95 --SYGTGVETSGQVRMLLDVRDSVENRHILIVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPS  159 (211)
T ss_pred             --ecCCCCcccCceEEecCCCCCCCCCEEEEEecccCCHHHHHHHHHHHHhcCCCEEEEEEEEEccc
Confidence              2211 11112222222  23588999999999999999999999999999999999999999963

>PRK00553 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.61  E-value=1.1e-14  Score=122.44  Aligned_cols=101  Identities=22%  Similarity=0.220  Sum_probs=83.8

Q ss_pred             CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHH
Q 030139           61 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTL  140 (182)
Q Consensus        61 ~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl  140 (182)
                      +..+||+++.||..+|..+|+.+|.|+.+++|++....           ....+.+.  ...+|++|+||||+++||+|+
T Consensus       168 ~~~vvVsPD~gg~~rA~~lA~~lg~~~~vi~K~r~~~~-----------~~~~~~~~--gdv~Gk~VIIVDDIi~TG~Tl  234 (332)
T PRK00553        168 KDLVVVSPDYGGVKRARLIAESLELPLAIIDKRRPKHN-----------VAESINVL--GEVKNKNCLIVDDMIDTGGTV  234 (332)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHhCCCEEEEEEecCCcc-----------eEeeEEee--ccCCCCEEEEEeccccchHHH
Confidence            44599999999999999999999999998887653211           01112221  247899999999999999999


Q ss_pred             HHHHHHHHhcCCeEEEEEEEEecCCcccccccCC
Q 030139          141 SAAIRLLERVGVHVVECACVIELPELKGRERLGE  174 (182)
Q Consensus       141 ~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~  174 (182)
                      .++++.|++.||..+.++|.|..+..++.+++.+
T Consensus       235 ~~aa~~Lk~~GA~~V~~~atHglf~~~a~~~l~~  268 (332)
T PRK00553        235 IAAAKLLKKQKAKKVCVMATHGLFNKNAIQLFDE  268 (332)
T ss_pred             HHHHHHHHHcCCcEEEEEEEeeecCchHHHHHHh
Confidence            9999999999999999999999998888888754

>PRK03092 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.61  E-value=5.8e-15  Score=122.79  Aligned_cols=109  Identities=23%  Similarity=0.234  Sum_probs=86.1

Q ss_pred             CccEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHH
Q 030139           61 NISVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGT  139 (182)
Q Consensus        61 ~~d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~T  139 (182)
                      +..+||+|+.||+.+|..+|+.++ .|+.+++|.+.....          +... .......++|++|+||||+++||+|
T Consensus       148 ~~~vvVspd~Ga~~~a~~la~~L~~~~~~~i~k~R~~~~~----------~~~~-~~~~~~dv~gr~viIVDDIi~TG~T  216 (304)
T PRK03092        148 DNVTVVSPDAGRVRVAEQWADRLGGAPLAFIHKTRDPTVP----------NQVV-ANRVVGDVEGRTCVLVDDMIDTGGT  216 (304)
T ss_pred             CCcEEEEecCchHHHHHHHHHHcCCCCEEEEEEEcccCCC----------CceE-EEecCcCCCCCEEEEEccccCcHHH
Confidence            345999999999999999999999 999888776531100          0001 1111234789999999999999999


Q ss_pred             HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139          140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL  180 (182)
Q Consensus       140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l  180 (182)
                      +.++++.|++.|+..+.++++|..+..++.+++.+.++..+
T Consensus       217 l~~aa~~Lk~~Ga~~I~~~~tH~v~~~~a~~~l~~~~~~~i  257 (304)
T PRK03092        217 IAGAVRALKEAGAKDVIIAATHGVLSGPAAERLKNCGAREV  257 (304)
T ss_pred             HHHHHHHHHhcCCCeEEEEEEcccCChHHHHHHHHCCCCEE
Confidence            99999999999999999999999988788888877665443

>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional

Probab=99.58  E-value=2.1e-14  Score=122.38  Aligned_cols=105  Identities=21%  Similarity=0.315  Sum_probs=83.5

Q ss_pred             CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeecccee-EEEE-ccccCCCCeEEEEecccCchH
Q 030139           61 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDV-MEMH-VGAVQAGERALIVDDLVATGG  138 (182)
Q Consensus        61 ~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~-~~l~-~~~~~~gk~VllVDDvitTG~  138 (182)
                      +..+||+|+.||..+|..+|..+|.|+.+++|.+......        .+.+. .... .+..++|++|+||||+++||+
T Consensus       207 ~~~VVVsPD~Gg~~rA~~~A~~Lg~~~ai~~K~R~~~~~~--------~g~~~~~~~~~~g~dV~gr~vIIVDDII~TG~  278 (382)
T PRK06827        207 DHLMVISPDTGAMDRAKYYASVLGVDLGLFYKRRDYSRVV--------NGRNPIVAHEFLGRDVEGKDVLIVDDMIASGG  278 (382)
T ss_pred             CCcEEEEECccchHHHHHHHHHhCCCEEEEEcccCCcccc--------cCCCceEEEecCCcccCCCEEEEEeCCcCcHH
Confidence            4579999999999999999999999999998876321100        01111 1111 122578999999999999999


Q ss_pred             HHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC
Q 030139          139 TLSAAIRLLERVGVHVVECACVIELPELKGRERLGE  174 (182)
Q Consensus       139 Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~  174 (182)
                      |+..+++.|++.||+.+.++++|..+. ++.+++.+
T Consensus       279 Tl~~aa~~Lk~~GA~~V~~~~tH~vf~-~a~~~l~~  313 (382)
T PRK06827        279 SMIDAAKELKSRGAKKIIVAATFGFFT-NGLEKFDK  313 (382)
T ss_pred             HHHHHHHHHHHcCCCEEEEEEEeecCh-HHHHHHHh
Confidence            999999999999999999999999977 88887753

>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=99.58  E-value=5.4e-14  Score=106.66  Aligned_cols=122  Identities=22%  Similarity=0.323  Sum_probs=93.3

Q ss_pred             chhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCceeeeeeeee-c
Q 030139           36 ITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLE-Y  109 (182)
Q Consensus        36 ~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~~~~~~~~~~-~  109 (182)
                      ...++.+.+.++.-++.||+++.+   .+..++||+..|+++|+..+.+++++|..+  +...          +|..+ .
T Consensus         7 ~~evLisee~I~~ri~ela~~I~~~y~g~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vS----------SYg~~t~   76 (178)
T COG0634           7 IKEVLISEEQIKARIKELAAQITEDYGGKDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVS----------SYGGGTS   76 (178)
T ss_pred             cceEeeCHHHHHHHHHHHHHHHHHhhCCCceEEEEEcccchhhHHHHHHhcCCCceeEEEEEe----------ccCCCcc
Confidence            344677888888888888877764   256799999999999999999999988643  2211          12111 1


Q ss_pred             cceeEEEEc--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcc
Q 030139          110 GKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELK  167 (182)
Q Consensus       110 ~~~~~~l~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~  167 (182)
                      +.+...+..  +..++||+||||||+++||.||..+.++|+..||+.+.++++++++..+
T Consensus        77 ssg~v~i~kDld~di~grdVLiVeDIiDsG~TLs~i~~~l~~r~a~sv~i~tLldK~~~r  136 (178)
T COG0634          77 SSGEVKILKDLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLKERGAKSVRIATLLDKPERR  136 (178)
T ss_pred             cCCceEEecccccCCCCCeEEEEecccccChhHHHHHHHHHhCCCCeEEEEEEeeCcccc
Confidence            122233332  3558999999999999999999999999999999999999999998543

>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase

Probab=99.58  E-value=1.8e-14  Score=120.13  Aligned_cols=106  Identities=24%  Similarity=0.279  Sum_probs=84.3

Q ss_pred             CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHH
Q 030139           61 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTL  140 (182)
Q Consensus        61 ~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl  140 (182)
                      +.++|++++.+|+.+|..+|+.+|+|+..++|.+..+.           +... ........+|++|+||||+++||+|+
T Consensus       159 ~~~viv~pd~g~~~~A~~lA~~Lg~~~~~i~k~r~~~~-----------~~~~-~~~~~~~v~g~~vliVDDii~tG~Tl  226 (308)
T TIGR01251       159 DNPVVVSPDAGGVERAKKVADALGCPLAIIDKRRISAT-----------NEVE-VMNLVGDVEGKDVVIVDDIIDTGGTI  226 (308)
T ss_pred             CCCEEEEECCchHHHHHHHHHHhCCCEEEEEEEecCCC-----------CEEE-EEecccccCCCEEEEEccccCCHHHH
Confidence            46799999999999999999999999998877653111           0000 00112347899999999999999999


Q ss_pred             HHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcc
Q 030139          141 SAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLF  178 (182)
Q Consensus       141 ~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~  178 (182)
                      ..+++.|++.|++.+.+++.|.....++.+++.+.++.
T Consensus       227 ~~a~~~l~~~ga~~v~~~~th~v~~~~a~~~l~~~~~~  264 (308)
T TIGR01251       227 AKAAEILKSAGAKRVIAAATHGVFSGPAIERIANAGVE  264 (308)
T ss_pred             HHHHHHHHhcCCCEEEEEEEeeecCcHHHHHHHhCCCC
Confidence            99999999999999999999987777777777765543

In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.

>PRK05793 amidophosphoribosyltransferase; Provisional

Probab=99.57  E-value=1.7e-14  Score=126.28  Aligned_cols=127  Identities=17%  Similarity=0.174  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEee-eccCCCCCce-eeeeeeeeccceeEEEEc-ccc
Q 030139           45 AFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM-RKPKKLPGEV-ISEEYSLEYGKDVMEMHV-GAV  121 (182)
Q Consensus        45 ~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~-rk~~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~  121 (182)
                      ....+++.|++... .+.|+|+++|.+|.++|..+|+.+|+|+... .+.+ ..+.+ .............+.+.. ...
T Consensus       273 ~R~~~G~~La~~~~-~~~D~Vv~vPdsg~~~A~~~A~~lgip~~~~l~r~~-~~~rtfi~~~q~~R~~~~~~k~~~~~~~  350 (469)
T PRK05793        273 SRVRAGRQLYKEYP-VDADIVIGVPDSGIPAAIGYAEASGIPYGIGFIKNK-YVGRTFIAPSQELRERAVRVKLNPLKVN  350 (469)
T ss_pred             HHHHHHHHHHHhcC-CCCCEEEEcCccHHHHHHHHHHHhCCCEeeeEEEee-eccccccChhHhhhhhhheEecccCccc
Confidence            44588999998765 3678999999999999999999999999642 2221 11111 100000000011122211 134


Q ss_pred             CCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC
Q 030139          122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG  173 (182)
Q Consensus       122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~  173 (182)
                      ++||+|+||||+++||+|+.++++.|+++||++|++.+.+.....+....++
T Consensus       351 v~gk~VlLVDD~ItTGtTl~~~~~~Lr~aGAk~V~~~~~~p~~~~p~~~gid  402 (469)
T PRK05793        351 VEGKRVVLIDDSIVRGTTSKRLVELLRKAGAKEVHFRVSSPPVKYPCYFGID  402 (469)
T ss_pred             cCCCEEEEEccccCchHHHHHHHHHHHHcCCCEEEEEEECCCcCcchhhhcc
Confidence            6899999999999999999999999999999999999999876555544444

>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional

Probab=99.56  E-value=6.4e-14  Score=112.56  Aligned_cols=130  Identities=15%  Similarity=0.175  Sum_probs=90.5

Q ss_pred             chhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCC---CCcee-eeeeeee
Q 030139           36 ITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKL---PGEVI-SEEYSLE  108 (182)
Q Consensus        36 ~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~---~~~~~-~~~~~~~  108 (182)
                      +..++.+.+.++...+.||.++.+   .+..+++|+..||+.|+..|.+.++............   ...+. .++|..+
T Consensus        53 ~~~vLis~~~I~~rI~~LA~~I~~dy~~~~~vilgILkGg~~FaadL~~~L~~~~~~~~~~~~~~~~~~dfi~vsSY~~~  132 (241)
T PTZ00149         53 LTKILLPNGLIKDRVEKLAYDIKQVYGNEELHILCILKGSRGFFSALVDYLNRIHNYSSTESPKPPYQEHYVRVKSYCND  132 (241)
T ss_pred             ccEEEeCHHHHHHHHHHHHHHHHHHcCCCCeEEEEECCCCHHHHHHHHHHHhhhhhccccccCcccccccEEEEEEccCC
Confidence            445678889999888888887764   3567999999999999999999986211100000000   00111 1233222


Q ss_pred             ccceeEEEEcc--ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139          109 YGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus       109 ~~~~~~~l~~~--~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      ...+.+.+...  ...+||+||||||+++||.||.++++.|++.|++.+.+++++.++.
T Consensus       133 ~s~g~v~i~~~~~~~l~gk~VLIVDDIidTG~Tl~~~~~~L~~~g~~~V~va~L~~K~~  191 (241)
T PTZ00149        133 ESTGKLEIVSDDLSCLKDKHVLIVEDIIDTGNTLVKFCEYLKKFEPKTIRIATLFEKRT  191 (241)
T ss_pred             CcCCceEEecccccccCCCEEEEEEeEeChHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence            22222323221  3479999999999999999999999999999999999999999863

>PRK07349 amidophosphoribosyltransferase; Provisional

Probab=99.56  E-value=2.3e-14  Score=125.88  Aligned_cols=116  Identities=17%  Similarity=0.186  Sum_probs=80.1

Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeee-ccceeEEEE-cccc
Q 030139           44 KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLE-YGKDVMEMH-VGAV  121 (182)
Q Consensus        44 ~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~-~~~~~~~l~-~~~~  121 (182)
                      +....+++.||+... .++|+|+|+|..|+++|..+|+.+|+|+.....+++..+.+..+..... ....++.+. ....
T Consensus       296 ~~R~~~G~~La~~~~-~~~DvVv~VP~sg~~~A~g~A~~lgip~~~~L~r~~y~grtfi~p~q~~R~~~~~~kl~~~~~~  374 (500)
T PRK07349        296 SYRQRLGQQLAKESP-VDADLVIGVPDSGIPAAIGFSQASGIPYAEGLIKNRYVGRTFIQPTQSMRESGIRMKLNPLKDV  374 (500)
T ss_pred             HHHHHHHHHHhhhcc-cCCcEEEEeccccHHHHHHHHHHHCCCchhceEEEeccCccccCCCHHHHHhhhheeeeccccc
Confidence            455688888886543 4789999999999999999999999999642222111211111110000 000112221 1234


Q ss_pred             CCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEE
Q 030139          122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV  160 (182)
Q Consensus       122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l  160 (182)
                      .+||+|+||||++|||+|+.++++.|+++||++|++..-
T Consensus       375 ~~gkrVlLVDDvIttGtTl~~~~~~Lr~aGAkeV~~~i~  413 (500)
T PRK07349        375 LAGKRIIIVDDSIVRGTTSRKIVKALRDAGATEVHMRIS  413 (500)
T ss_pred             cCCCEEEEEeceeCCcHHHHHHHHHHHHhCCeEEEEEeC
Confidence            689999999999999999999999999999999988643

>PRK11595 DNA utilization protein GntX; Provisional

Probab=99.55  E-value=4.5e-14  Score=113.01  Aligned_cols=119  Identities=19%  Similarity=0.276  Sum_probs=77.8

Q ss_pred             CHHHHHHHHHHHHHHhc------C-CCccEEEeeC-------CCChhhHHHHHH----HhCCCeE---eeeccCCCCCce
Q 030139           42 DTKAFRDTIDLFVERYK------D-KNISVVAGIE-------ARGFIFGPPIAL----AIGAKFV---PMRKPKKLPGEV  100 (182)
Q Consensus        42 ~~~~~~~~~~~la~~~~------~-~~~d~Iv~v~-------~~G~~~a~~la~----~l~vp~~---~~rk~~~~~~~~  100 (182)
                      +....+.+++.|++.+.      . ..+|.|++||       .+||+++..+|+    .+++|+.   ..+.+.+.++..
T Consensus        86 ~~~l~~~l~~~l~~~~~~~~~~~~~~~~d~ivpVPl~~~r~~~RGfnq~~~la~~la~~~~~~~~~~~l~r~~~~~~q~~  165 (227)
T PRK11595         86 RSELASVLARLLLLEWLQARRSTGLQKPDRIISVPLHQRRHWRRGFNQSDLLCRPLARWLGCDYDSEALTRTRATATQHF  165 (227)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhhcccCCCeEEecCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCcccceEEecCCCCccc
Confidence            56677777777765432      1 2578999998       469987666655    4577763   222222212211


Q ss_pred             eeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEe
Q 030139          101 ISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIE  162 (182)
Q Consensus       101 ~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~  162 (182)
                      .+...+.....+.|.+.  ...+|++|||||||+|||+|+.++++.|++.|+..|.++++..
T Consensus       166 l~~~~R~~n~~~~f~~~--~~~~~~~vllvDDv~tTG~Tl~~~~~~L~~~g~~~V~~~~la~  225 (227)
T PRK11595        166 LSARLRKRNLKNAFRLE--LPVQGQHMAIVDDVVTTGSTVAEIAQLLLRNGAASVQVWCLCR  225 (227)
T ss_pred             CCHHHHhhhhhhhhccC--CCCCCCEEEEEeeeecchHHHHHHHHHHHHcCCcEEEEEEEEe
Confidence            11111111112234332  2378999999999999999999999999999999999998854

>PLN02369 ribose-phosphate pyrophosphokinase

Probab=99.54  E-value=8.5e-14  Score=115.71  Aligned_cols=104  Identities=22%  Similarity=0.254  Sum_probs=84.1

Q ss_pred             cEEEeeCCCChhhHHHHHHHh-CCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHH
Q 030139           63 SVVAGIEARGFIFGPPIALAI-GAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLS  141 (182)
Q Consensus        63 d~Iv~v~~~G~~~a~~la~~l-~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~  141 (182)
                      -+|++++.+|.++|..+++.+ +.|+..++|.+.....           ...+.+  ....+|++|+||||+++||+|+.
T Consensus       153 ~vvVspd~gg~~~a~~~a~~l~~~~~~~l~k~R~~~~~-----------~~~~~~--~~~v~g~~viivDDii~TG~Tl~  219 (302)
T PLN02369        153 LVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRQGHNV-----------AEVMNL--IGDVKGKVAIMVDDMIDTAGTIT  219 (302)
T ss_pred             eEEEEECcChHHHHHHHHHHcCCCCEEEEEEecCCcce-----------eeeEec--CCCCCCCEEEEEcCcccchHHHH
Confidence            489999999999999999999 7899888876532110           011111  23478999999999999999999


Q ss_pred             HHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCccc
Q 030139          142 AAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFV  179 (182)
Q Consensus       142 ~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~  179 (182)
                      ++++.|++.|++.+.++++|.....++.+++.+.++..
T Consensus       220 ~a~~~l~~~Ga~~v~~~~tH~v~~~~a~~~l~~~~~~~  257 (302)
T PLN02369        220 KGAALLHQEGAREVYACATHAVFSPPAIERLSSGLFQE  257 (302)
T ss_pred             HHHHHHHhCCCCEEEEEEEeeeeCHHHHHHHHhCCCCE
Confidence            99999999999999999999988888888887654443

>COG2236 Predicted phosphoribosyltransferases [General function prediction only]

Probab=99.54  E-value=2.2e-14  Score=111.41  Aligned_cols=115  Identities=19%  Similarity=0.240  Sum_probs=85.8

Q ss_pred             hhcCHHHHHHHHHHHHHHhc--CCCccEEEeeCCCChhhHHHHHHHhCC-CeEeeeccCCCCCceeeeeeeeec-cceeE
Q 030139           39 LLLDTKAFRDTIDLFVERYK--DKNISVVAGIEARGFIFGPPIALAIGA-KFVPMRKPKKLPGEVISEEYSLEY-GKDVM  114 (182)
Q Consensus        39 l~~~~~~~~~~~~~la~~~~--~~~~d~Iv~v~~~G~~~a~~la~~l~v-p~~~~rk~~~~~~~~~~~~~~~~~-~~~~~  114 (182)
                      .+.+++.++.+++.||+++.  ++++|+|+++.+||+.+|..+|..|++ |+..+...+.          .... .....
T Consensus         5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaRGG~~pariLsd~L~~~~l~~i~v~~y----------~~~~~~~~~~   74 (192)
T COG2236           5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIARGGLIPARILSDFLGVKPLYSIKVEHY----------DETAERDGEA   74 (192)
T ss_pred             EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCceehHHHHHHHhCCCceEEEEEEEe----------hhhcccCCcc
Confidence            46688999999999999997  479999999999999999999999998 6655432221          1000 00111


Q ss_pred             EEEcc--c-cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEec
Q 030139          115 EMHVG--A-VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIEL  163 (182)
Q Consensus       115 ~l~~~--~-~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~  163 (182)
                      .+...  . ...||+||||||+.+||.||..+.+.|++..+..+.++++..+
T Consensus        75 ~v~~~~~~d~l~GkkVLIVDDI~DTG~Tl~~a~~~l~~~~p~e~rta~l~~~  126 (192)
T COG2236          75 KVKYPITIDPLSGKKVLIVDDIVDTGETLELALEELKKLAPAEVRTAVLQYK  126 (192)
T ss_pred             eeecCccccccCCCeEEEEecccCchHhHHHHHHHHHhhCchhhhhhhhhcc
Confidence            22211  1 1689999999999999999999999999977777766655443

>PRK02812 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.54  E-value=6.7e-14  Score=117.48  Aligned_cols=107  Identities=22%  Similarity=0.289  Sum_probs=85.7

Q ss_pred             CccEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHH
Q 030139           61 NISVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGT  139 (182)
Q Consensus        61 ~~d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~T  139 (182)
                      +..+||+++.||..+|..+|+.++ .|+.++.|++.....           ...+.+  ....+|++|+||||+++||+|
T Consensus       179 ~~~vvVsPD~gg~~ra~~~A~~L~~~~~~~~~k~R~~~~~-----------~~~~~~--~~~v~g~~viiVDDii~TG~T  245 (330)
T PRK02812        179 EDIVVVSPDVGGVARARAFAKKLNDAPLAIIDKRRQAHNV-----------AEVLNV--IGDVKGKTAILVDDMIDTGGT  245 (330)
T ss_pred             CCeEEEEECCccHHHHHHHHHHhCCCCEEEEEeeccCCce-----------eeeEec--cccCCCCEEEEEccccCcHHH
Confidence            446999999999999999999995 899888776531110           011111  124789999999999999999


Q ss_pred             HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139          140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL  180 (182)
Q Consensus       140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l  180 (182)
                      +.++++.|++.|++.+.+++.|..+..++.++|.+.++..+
T Consensus       246 ~~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~id~i  286 (330)
T PRK02812        246 ICEGARLLRKEGAKQVYACATHAVFSPPAIERLSSGLFEEV  286 (330)
T ss_pred             HHHHHHHHhccCCCeEEEEEEcccCChHHHHHHhhCCCCEE
Confidence            99999999999999999999999988888888876554443

>PRK09123 amidophosphoribosyltransferase; Provisional

Probab=99.53  E-value=7.1e-14  Score=122.56  Aligned_cols=112  Identities=18%  Similarity=0.205  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCceeeeeeeeeccceeEEEEc---
Q 030139           44 KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLEYGKDVMEMHV---  118 (182)
Q Consensus        44 ~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~~~~~~~~~~~~~~~~~l~~---  118 (182)
                      +..+.+++.|++..+. ++|+|+|+|.+|+++|..+|+.+++|+..  +|.+..  +.+..+... ......+.+..   
T Consensus       279 ~~R~~~g~~La~~~~~-~~D~Vv~VP~sg~~~A~~la~~lgip~~~~lir~~y~--grt~i~~~q-~~r~~~v~~k~~~~  354 (479)
T PRK09123        279 EVRKNIGRELARESPV-DADVVVPVPDSGVPAAIGYAQESGIPFELGIIRNHYV--GRTFIQPTQ-QIRNLGVKLKHNAN  354 (479)
T ss_pred             HHHHHHHHHHHHhCCC-CCeEEEEcCccHHHHHHHHHHhcCCCeeheEEEEeec--Ccccccccc-ccccccEEEEeccc
Confidence            5666888888877653 78999999999999999999999999963  443221  111111000 00111222221   


Q ss_pred             cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEE
Q 030139          119 GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECAC  159 (182)
Q Consensus       119 ~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~  159 (182)
                      ....+||+|+||||+++||+|+.++++.|+++||+.|++.+
T Consensus       355 ~~~~~gk~vvlvDD~i~tG~Tl~~~~~~l~~~Ga~~v~~~~  395 (479)
T PRK09123        355 RAVIEGKRVVLVDDSIVRGTTSRKIVQMLRDAGAKEVHLRI  395 (479)
T ss_pred             ccccCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEE
Confidence            23478999999999999999999999999999999999987

>PLN02297 ribose-phosphate pyrophosphokinase

Probab=99.53  E-value=7e-14  Score=116.89  Aligned_cols=109  Identities=22%  Similarity=0.180  Sum_probs=84.2

Q ss_pred             HHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCe
Q 030139           50 IDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGER  126 (182)
Q Consensus        50 ~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~  126 (182)
                      ...+++++.+   .+..+||+|+.||...+..++  ++.|+.++.|.+..              ...........++|++
T Consensus       169 ~~~l~~~i~~~~~~~~~vvVsPD~Ga~~ra~~~a--~~~~~~~~~K~R~g--------------~~~~~~~~~~dv~gr~  232 (326)
T PLN02297        169 IPLLKKRLQQLPDSDNIVIAFPDDGAWKRFHKQF--EHFPMVVCTKVREG--------------DKRIVRIKEGNPAGRH  232 (326)
T ss_pred             HHHHHHHHHhccccCCcEEEecCccHHHHHHHHc--CCCCEEEEEeEECC--------------CceEEEecccccCCCe
Confidence            3445554432   234599999999998887776  58899988876531              1111111223479999


Q ss_pred             EEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC
Q 030139          127 ALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE  174 (182)
Q Consensus       127 VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~  174 (182)
                      |+||||+++||+|+.++++.|++.|++.+.++|.|..+..++.++|.+
T Consensus       233 vlIVDDIidTG~Tl~~aa~~L~~~Ga~~V~~~~THglfs~~a~~~l~~  280 (326)
T PLN02297        233 VVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPNESWERFTH  280 (326)
T ss_pred             EEEEecccCcHHHHHHHHHHHHHCCCcEEEEEEECcccChhHHHHHHh
Confidence            999999999999999999999999999999999999998888888875

>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional

Probab=99.53  E-value=9.1e-14  Score=119.71  Aligned_cols=108  Identities=23%  Similarity=0.286  Sum_probs=88.0

Q ss_pred             CccEEEeeCCCChhhHHHHHHHhC------CCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEeccc
Q 030139           61 NISVVAGIEARGFIFGPPIALAIG------AKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLV  134 (182)
Q Consensus        61 ~~d~Iv~v~~~G~~~a~~la~~l~------vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvi  134 (182)
                      ...+||+++.||...|..+|..++      .++.++.|.+..+++.           ..+.+  ...++|++|+||||++
T Consensus       279 ~~pVVVsPD~Ga~~RAr~~A~~L~~~~~~~~~~avl~K~R~~~~~v-----------~~~~l--vgdV~Gk~vIIVDDII  345 (439)
T PTZ00145        279 YKPVIVSPDAGGVYRARKFQDGLNHRGISDCGIAMLIKQRTKPNEI-----------EKMDL--VGNVYDSDVIIVDDMI  345 (439)
T ss_pred             CccEEEccCcchHHHHHHHHHHhccccccCCCEEEEEeecCCCCce-----------EEEec--cCCCCCCEEEEEccee
Confidence            445999999999999999999997      6888877765322110           11222  2348999999999999


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCccccc
Q 030139          135 ATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV  181 (182)
Q Consensus       135 tTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l~  181 (182)
                      +||+|+.++++.|++.||..|.++|+|..+..++.++|.+.++..++
T Consensus       346 dTG~Tl~~aa~~Lk~~GA~~V~~~~THglfs~~A~~rl~~s~i~~Iv  392 (439)
T PTZ00145        346 DTSGTLCEAAKQLKKHGARRVFAFATHGLFSGPAIERIEASPLEEVV  392 (439)
T ss_pred             CcHHHHHHHHHHHHHcCCCEEEEEEEcccCChhHHHHHhcCCCCEEE
Confidence            99999999999999999999999999999998999999877765543

>PLN02440 amidophosphoribosyltransferase

Probab=99.52  E-value=8.5e-14  Score=122.22  Aligned_cols=115  Identities=19%  Similarity=0.259  Sum_probs=81.6

Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCce-eeeeeeeeccceeEEEEc-c
Q 030139           44 KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEV-ISEEYSLEYGKDVMEMHV-G  119 (182)
Q Consensus        44 ~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~~-~~~~~~~~~~~~~~~l~~-~  119 (182)
                      ..-..+++.|++.+.. ++|+|+++|.+|+++|..+|+.+|+|+..  +|.+..  +.+ ............++.+.. .
T Consensus       259 ~~r~~~g~~La~~~~~-~~d~vvpVP~s~~~~A~~la~~lgiP~~~~lvr~ry~--~rt~i~~~q~~r~~~~~~k~~~~~  335 (479)
T PLN02440        259 ESRLEFGEILATEIPV-DCDVVIPVPDSGRVAALGYAAKLGVPFQQGLIRSHYV--GRTFIEPSQKIRDFSVKLKLNPVR  335 (479)
T ss_pred             HHHHHHHHHHHHhcCC-CCCEEEEeCCcHHHHHHHHHHHhCCCchhheEEEeec--cccccCcchhhhhhhheeeeeccc
Confidence            3444778888877653 78999999999999999999999999853  332221  111 100000000111122211 1


Q ss_pred             ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEE
Q 030139          120 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI  161 (182)
Q Consensus       120 ~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~  161 (182)
                      ...+||+||||||++|||+|+.++++.|+++||++|++.++.
T Consensus       336 ~~v~gk~VlLVDDiittGtTl~~i~~~L~~aGa~~V~v~v~~  377 (479)
T PLN02440        336 SVLEGKRVVVVDDSIVRGTTSSKIVRMLREAGAKEVHMRIAS  377 (479)
T ss_pred             ccccCceEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEC
Confidence            347899999999999999999999999999999999998886

>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A

Probab=99.51  E-value=4.4e-14  Score=108.65  Aligned_cols=118  Identities=24%  Similarity=0.233  Sum_probs=79.2

Q ss_pred             CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCc-e----eeee------ee------eeccc--eeEEEEcccc
Q 030139           61 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGE-V----ISEE------YS------LEYGK--DVMEMHVGAV  121 (182)
Q Consensus        61 ~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~-~----~~~~------~~------~~~~~--~~~~l~~~~~  121 (182)
                      +.-+||++..+|..-|+.+|+.|++.+..+.+.++.... .    .+..      ..      ....+  ..+.+.  ..
T Consensus         3 ~naVIVa~~~g~akRAts~Ad~L~l~~avih~e~~~~~~~~~~~~~s~p~~~~~~~~~~~~~~~~~~~e~~~~~vV--GD   80 (184)
T PF14572_consen    3 RNAVIVAKDPGGAKRATSFADRLRLGFAVIHGERRDSESDGVDGRHSPPMSRSAAVSSSEEIPEMTPKEKPPMNVV--GD   80 (184)
T ss_dssp             GGEEEEESSGGGHHHHHHHHHHCT-EEEEE------------------------------------------EEEE--S-
T ss_pred             CCCEEEeCCCCchHhHHHHHHHhCCCeeEecCccccccccccccccCCCccccccccccchhhhcccCcccceEEE--EE
Confidence            446899999999999999999999998877654431100 0    0000      00      00000  112222  34


Q ss_pred             CCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139          122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL  180 (182)
Q Consensus       122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l  180 (182)
                      ++||.++||||+++||+|+..+++.|++.||..|.+++.|+.+..++.++|.+.++..+
T Consensus        81 V~gk~~IIvDDiIdtg~Tl~~aA~~Lk~~GA~~V~~~aTHgvfs~~A~~~l~~s~Id~v  139 (184)
T PF14572_consen   81 VKGKICIIVDDIIDTGGTLIKAAELLKERGAKKVYACATHGVFSGDAPERLEESPIDEV  139 (184)
T ss_dssp             -TTSEEEEEEEEESSTHHHHHHHHHHHHTTESEEEEEEEEE---TTHHHHHHHSSESEE
T ss_pred             ccCCeEeeecccccchHHHHHHHHHHHHcCCCEEEEEEeCcccCchHHHHHhhcCCeEE
Confidence            89999999999999999999999999999999999999999999899999888776554

...

>PRK06781 amidophosphoribosyltransferase; Provisional

Probab=99.50  E-value=6.3e-14  Score=122.58  Aligned_cols=117  Identities=20%  Similarity=0.207  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe-eeccCCCCCcee--eeeeeeeccceeEEEEccc
Q 030139           44 KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEVI--SEEYSLEYGKDVMEMHVGA  120 (182)
Q Consensus        44 ~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~-~rk~~~~~~~~~--~~~~~~~~~~~~~~l~~~~  120 (182)
                      +....+++.||+... .+.|+|+++|..|.+.|..+|+.+|+|+.. +.|.++...++.  ....+...-+..|... ..
T Consensus       267 ~~R~~~G~~La~~~~-~~~D~vv~VP~s~~~~A~~~a~~~gip~~~~lik~~~~~rt~~~~~~~~R~~~v~~~f~~~-~~  344 (471)
T PRK06781        267 AARKNMGKRLAAEAP-IEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQELREQGVKMKLSAV-RG  344 (471)
T ss_pred             HHHHHHHHHHhhhCC-CCCcEEEEcChhHHHHHHHHHHHhCCCcccceEEEccCCCCCcCCCHHHHHHHHhcceecc-cc
Confidence            456689999998764 478999999999999999999999999864 222222110111  1000000112234322 24


Q ss_pred             cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEe
Q 030139          121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIE  162 (182)
Q Consensus       121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~  162 (182)
                      ..+||+|+||||++|||+|+.++++.|+++||++|++.+-..
T Consensus       345 ~i~gk~VlLVDDvittGtTl~~~~~~Lk~aGA~eV~v~i~sP  386 (471)
T PRK06781        345 VVEGKRVVMIDDSIVRGTTSKRIVRMLREAGATEVHVRIASP  386 (471)
T ss_pred             ccCCceEEEEeceeccchHHHHHHHHHHHcCCcEEEEEECCC
Confidence            578999999999999999999999999999999998875543

>TIGR01134 purF amidophosphoribosyltransferase

Probab=99.50  E-value=7.1e-14  Score=121.69  Aligned_cols=114  Identities=19%  Similarity=0.195  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe-eeccCCCCCcee-e--eeeeeeccceeEEEEcc
Q 030139           44 KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEVI-S--EEYSLEYGKDVMEMHVG  119 (182)
Q Consensus        44 ~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~-~rk~~~~~~~~~-~--~~~~~~~~~~~~~l~~~  119 (182)
                      +....+++.||+..+ .++|+|+++|..|+++|..+|+.+|+|+.. +.|.+. .+... .  +.-+....+..+... .
T Consensus       257 ~~R~~~g~~La~~~~-~~~D~Vv~VP~sg~~~A~~la~~lgip~~~~l~r~~~-~~r~~i~~~q~~R~~~v~~k~~~~-~  333 (442)
T TIGR01134       257 KARKRMGEKLARESP-VEADVVIPVPDSGRSAALGFAQASGIPYREGLIKNRY-VGRTFIMPTQELRELSVRLKLNPI-R  333 (442)
T ss_pred             HHHHHHHHHHHHhcC-CCCEEEEEccCCHHHHHHHHHHHhCCCchHHeEEecc-ccccccCCCHHHHHHHHhhhcccc-c
Confidence            455688888887654 478999999999999999999999999864 222221 11111 1  000000011122211 2


Q ss_pred             ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEE
Q 030139          120 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV  160 (182)
Q Consensus       120 ~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l  160 (182)
                      ...+||+|+||||++|||+|++++++.|+++|+++|++.+.
T Consensus       334 ~~~~gk~v~lvDD~ittG~T~~~~~~~l~~~ga~~v~~~~~  374 (442)
T TIGR01134       334 EVFRGKRVVLVDDSIVRGTTSRQIVKMLRDAGAKEVHVRIA  374 (442)
T ss_pred             ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEEc
Confidence            34689999999999999999999999999999999998766

Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.

>PRK07272 amidophosphoribosyltransferase; Provisional

Probab=99.49  E-value=7.3e-14  Score=122.43  Aligned_cols=114  Identities=18%  Similarity=0.247  Sum_probs=81.8

Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe-eeccCCCCCcee---eeeeeeeccceeEEEEcc
Q 030139           44 KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEVI---SEEYSLEYGKDVMEMHVG  119 (182)
Q Consensus        44 ~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~-~rk~~~~~~~~~---~~~~~~~~~~~~~~l~~~  119 (182)
                      ...+.+++.|++.+.. ++|+|+|||..|.++|..+|+.+|+|+.. ..|.+ ..+...   .+..+...-+..|... .
T Consensus       269 ~~R~~lg~~La~~~~~-~~D~VvpVPnqa~~lA~~la~~lgip~~~~lvk~~-~~~rt~~~~~q~~R~~~vr~~f~~~-~  345 (484)
T PRK07272        269 TARKRMGKRLAQEFPH-DADIVIGVPNSSLSAASGYAEESGLPYEMGLVKNQ-YVARTFIQPTQELREQGVRMKLSAV-S  345 (484)
T ss_pred             HHHHHHHHHHHhhcCC-CCCEEEEecHHHHHHHHHHHHHHCCCcccCeEEEc-cCCccccCCCHHHHHHHHhhCcccc-c
Confidence            3446888888876643 57999999999999999999999999843 22222 111111   1100000111223321 2


Q ss_pred             ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEE
Q 030139          120 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV  160 (182)
Q Consensus       120 ~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l  160 (182)
                      ...+||+|+||||++|||+|+.++++.|+++|+++|++.+.
T Consensus       346 ~~~~gk~vllVDDvittG~T~~~~~~~L~~~Ga~~v~~~~~  386 (484)
T PRK07272        346 GVVKGKRVVMVDDSIVRGTTSRRIVQLLKEAGAKEVHVAIA  386 (484)
T ss_pred             cccCCCEEEEEccccCchHHHHHHHHHHHhcCCcEEEEEEe
Confidence            35789999999999999999999999999999999999998

>PRK09246 amidophosphoribosyltransferase; Provisional

Probab=99.49  E-value=9.4e-14  Score=122.58  Aligned_cols=114  Identities=18%  Similarity=0.167  Sum_probs=76.7

Q ss_pred             HHHHHHHH----HhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCC-ceeeeeeeeeccceeEEEEccc
Q 030139           48 DTIDLFVE----RYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPG-EVISEEYSLEYGKDVMEMHVGA  120 (182)
Q Consensus        48 ~~~~~la~----~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~-~~~~~~~~~~~~~~~~~l~~~~  120 (182)
                      .+++.|++    .+...+.|+|+++|..+..+|..+|+.+|+|+..  ++.+..... ....+..+...-+..|... ..
T Consensus       276 ~lg~~LA~~l~~~~~~~~~D~VvpVP~s~~~~A~~la~~lgip~~~~l~k~~~~~rt~i~~~q~~R~~~vr~~f~~~-~~  354 (501)
T PRK09246        276 RMGEKLAEKIKREWPDLDIDVVIPIPDTSRDAALEIARILGVPYREGFVKNRYVGRTFIMPGQAQRKKSVRQKLNAI-RA  354 (501)
T ss_pred             HHHHHHHHHHHHHhcCCCCcEEEEeCccHHHHHHHHHHHHCCCccceEEEEecccccccCcCHHHHHHHHHhhcCCc-cc
Confidence            44555554    4333357999999999999999999999999853  222211100 0000000000011223221 23


Q ss_pred             cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEe
Q 030139          121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIE  162 (182)
Q Consensus       121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~  162 (182)
                      .++||+|+||||++|||+|+.++++.|+++||+.|++.++..
T Consensus       355 ~v~gK~VlLVDDvitTGaTl~~~~~~L~~aGA~~V~v~v~ap  396 (501)
T PRK09246        355 EFKGKNVLLVDDSIVRGTTSEQIVQMAREAGAKKVYFASAAP  396 (501)
T ss_pred             cccCCeEEEEeccccccHHHHHHHHHHHHcCCCEEEEEEEcc
Confidence            478999999999999999999999999999999999988854

>PRK07847 amidophosphoribosyltransferase; Provisional

Probab=99.49  E-value=2.3e-13  Score=119.88  Aligned_cols=116  Identities=17%  Similarity=0.157  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEc---cc
Q 030139           44 KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHV---GA  120 (182)
Q Consensus        44 ~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~---~~  120 (182)
                      +....+++.||++.+ .+.|+|+++|.+|+++|..+|+.+|+|+.....+.+..+.+.....+ ......+.++.   ..
T Consensus       286 ~~R~~~G~~La~~~~-~~~D~VvpVP~sG~~~A~g~a~~~gip~~~~l~kn~~~grtfi~~~q-~~r~~~~r~k~~~~~~  363 (510)
T PRK07847        286 AARVEIGRRLAREHP-VEADLVIPVPESGTPAAVGYAQESGIPFGQGLVKNAYVGRTFIQPSQ-TIRQLGIRLKLNPLRE  363 (510)
T ss_pred             HHHHHHHHHHHhhCC-CCCeEEEeccCchHHHHHHHHHHhCCChhhceEeecccccCccCcch-hhhhhceeeecCcccc
Confidence            456689999998654 47899999999999999999999999985532222111111111100 00111111211   23


Q ss_pred             cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEE
Q 030139          121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI  161 (182)
Q Consensus       121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~  161 (182)
                      ..+||+||||||++|||+|+.++++.|+++|++.|++..-.
T Consensus       364 ~~~gk~vllVDD~ittG~T~~~~~~~L~~~ga~~v~~ri~s  404 (510)
T PRK07847        364 VIRGKRLVVVDDSIVRGNTQRALVRMLREAGAAEVHVRISS  404 (510)
T ss_pred             ccCCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEEEECC
Confidence            36899999999999999999999999999999998876443

>PRK06388 amidophosphoribosyltransferase; Provisional

Probab=99.49  E-value=2.4e-13  Score=119.02  Aligned_cols=115  Identities=17%  Similarity=0.207  Sum_probs=80.2

Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe-eeccCCCCCceeeeeeeeeccceeEEEEc---c
Q 030139           44 KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEVISEEYSLEYGKDVMEMHV---G  119 (182)
Q Consensus        44 ~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~-~rk~~~~~~~~~~~~~~~~~~~~~~~l~~---~  119 (182)
                      +....+++.|++... .+.|+|+++|..|.+.|..+|+.+|+|+.. +.|.+....++.....  +.....+.+..   .
T Consensus       275 ~~R~~~G~~La~~~~-~~~D~VvpVP~s~~~~A~g~a~~~gip~~~~L~r~r~~~r~fi~~~q--~~R~~~~~~kl~~~~  351 (474)
T PRK06388        275 QARVRMGMRLAKESP-VEADVVVPVPDSGRSQAIGFSMASGIPYTEGLIKNRYSERTFIMPTQ--SDRKAAIKLKLNPIR  351 (474)
T ss_pred             HHHHHHHHHHHhhcc-CCCcEEEeeCCCcHHHHHHHHHHhCCCchhheEEecccCCcccCCch--hhhhhceeEEecccc
Confidence            345588888887653 478999999999999999999999999954 2222221111111000  00111122221   1


Q ss_pred             ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEE
Q 030139          120 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI  161 (182)
Q Consensus       120 ~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~  161 (182)
                      ...+||+||||||++|||+|+++++++|+++||++|++..-.
T Consensus       352 ~~i~gk~VlLVDDsittGtTl~~~~~~L~~aGak~V~~ri~s  393 (474)
T PRK06388        352 EVISGKRIVLVDDSIVRGNTMRFIVKIMRKYGAKEVHVRIGS  393 (474)
T ss_pred             ccccCceEEEEeCeECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            246899999999999999999999999999999998886544

>PRK08341 amidophosphoribosyltransferase; Provisional

Probab=99.48  E-value=2.7e-13  Score=117.80  Aligned_cols=115  Identities=18%  Similarity=0.183  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe-eeccCCCCCceeeeeeeeeccceeEEEEc-ccc
Q 030139           44 KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEVISEEYSLEYGKDVMEMHV-GAV  121 (182)
Q Consensus        44 ~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~-~rk~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~  121 (182)
                      .....+++.||+... .++|+|+++|..|.++|..+|+.+|+|+.. +.|.+. .+.+.....+.+ ....+.+.. ...
T Consensus       255 ~~R~~~G~~La~~~~-~~~D~Vv~VPdsg~~~A~~~a~~lgip~~~~l~k~r~-~~rtfi~~~qr~-~~~~~k~~~~~~~  331 (442)
T PRK08341        255 SARYRMGVELARESP-AEGDVVIAVPDSGRTAALGFAHESGIPYMEGLIKNRY-IGRTFIMPSGRE-LKVKLKLSPVREV  331 (442)
T ss_pred             HHHHHHHHHhhcccC-CCCceEEEecCchHHHHHHHHHHhCCCchheEEEecc-ccccccCcCchh-hhheeeecccccc
Confidence            455588888887654 468999999999999999999999999964 333321 111111000000 011122211 234


Q ss_pred             CCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEE
Q 030139          122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI  161 (182)
Q Consensus       122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~  161 (182)
                      .+||+|+||||++|||+|+.++++.|+++||++|++.+..
T Consensus       332 v~gk~VlLVDD~IttGtTl~~~~~~L~~aGAk~V~~~~~s  371 (442)
T PRK08341        332 INGKRVVLVDDSIVRGTTMKRIVKMLRDAGAREVHVRIAS  371 (442)
T ss_pred             cCCCEEEEEeeeeccHHHHHHHHHHHHhcCCcEEEEEEcC
Confidence            6899999999999999999999999999999999887643

>PRK07631 amidophosphoribosyltransferase; Provisional

Probab=99.46  E-value=1.5e-13  Score=120.16  Aligned_cols=116  Identities=18%  Similarity=0.175  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe-eeccCCCCCceeeee---eeeeccceeEEEEcc
Q 030139           44 KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEVISEE---YSLEYGKDVMEMHVG  119 (182)
Q Consensus        44 ~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~-~rk~~~~~~~~~~~~---~~~~~~~~~~~l~~~  119 (182)
                      +....+++.||+... .+.|+|+++|..|.++|..+|+.+|+|+.. ..|.+.. +.+..+.   .+...-+..|... .
T Consensus       267 ~~R~~~G~~La~~~~-~~~D~VvpVP~s~~~~A~gla~~~gip~~~~lik~~~~-~Rt~i~~~~~~R~~nv~~~f~~~-~  343 (475)
T PRK07631        267 TARKNLGKRLALEAP-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYV-GRTFIQPSQALREQGVKMKLSPV-R  343 (475)
T ss_pred             HHHHHHHHHHHhhCC-CCCcEEEEechhHHHHHHHHHHHHCCCcccceEEEecC-CCCCcCCCHHHHHHHHhhhhhhc-c
Confidence            455689999997654 478999999999999999999999999964 2222211 1111100   0000011223221 2


Q ss_pred             ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEe
Q 030139          120 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIE  162 (182)
Q Consensus       120 ~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~  162 (182)
                      ...+||+|+||||++|||+|+.++++.|+++||++|++.+-..
T Consensus       344 ~~v~gk~VlLVDDsittGtTl~~~~~~L~~aGA~eV~v~~~sP  386 (475)
T PRK07631        344 GVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVRISSP  386 (475)
T ss_pred             cccCCceEEEEeeeeccHHHHHHHHHHHHHcCCCEEEEEEeCC
Confidence            3478999999999999999999999999999999998876543

>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]

Probab=99.39  E-value=1.1e-12  Score=112.21  Aligned_cols=116  Identities=18%  Similarity=0.203  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEcc---c
Q 030139           44 KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVG---A  120 (182)
Q Consensus        44 ~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~---~  120 (182)
                      .....+++.||++.+ .+.|+|+|||.+|.+.|..+|+.+|+|+..-.-+.+..+.+.-.+.+ +..+..+.++.+   .
T Consensus       267 ~~R~~mG~~La~e~~-~eaDvVipVPDSg~~aAig~A~~sGiPy~~GliKNrYvgRTFI~P~q-~~R~~~Vr~KLnpvr~  344 (470)
T COG0034         267 EARKRMGEKLAEEIP-VEADVVIPVPDSGRPAAIGYARASGIPYEEGLIKNRYVGRTFIMPTQ-ELREKGVRLKLNPVRE  344 (470)
T ss_pred             HHHHHHHHHHHHhCC-ccccEEEecCCCChHHHHHHHHHhCCchhhccccccccceeeeCCcH-HHHHhhhhhhcCchHH
Confidence            455688888888765 46799999999999999999999999996533222223332221111 111122222222   4


Q ss_pred             cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEE
Q 030139          121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI  161 (182)
Q Consensus       121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~  161 (182)
                      ..+||||+||||.+-.|+|++..++.|+++||++|++..-.
T Consensus       345 ~v~GKrVvlVDDSIVRGTTsr~IV~mlReAGAkEVHvrias  385 (470)
T COG0034         345 VVKGKRVVLVDDSIVRGTTSRRIVQMLREAGAKEVHVRIAS  385 (470)
T ss_pred             HhCCCeEEEEccccccCccHHHHHHHHHHhCCCEEEEEecC
Confidence            58999999999999999999999999999999999987544

>KOG1448 consensus Ribose-phosphate pyrophosphokinase [Nucleotide transport and metabolism; Amino acid transport and metabolism]

Probab=99.34  E-value=6.4e-12  Score=102.23  Aligned_cols=125  Identities=22%  Similarity=0.202  Sum_probs=97.6

Q ss_pred             EechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccce-
Q 030139           34 QDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKD-  112 (182)
Q Consensus        34 ~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~-  112 (182)
                      +-+.++|..|..++++...    ..+++.-+|++++.||...++.+|..|++-+..+.|.+...           .+-. 
T Consensus       140 ipVdnly~~p~~l~~ir~~----~~~~~~~vivSPdaGgaKR~~s~ad~l~~~fali~ker~k~-----------~~v~~  204 (316)
T KOG1448|consen  140 IPVDNLYAEPAVLNYIREN----IPDSENAVIVSPDAGGAKRVTSLADRLNLDFALIHKERRKA-----------NEVDI  204 (316)
T ss_pred             ccchhhccchHHHHHHHhh----CCCccceEEECCCcchhhhhHHHHHhhcchhhhhhhhhhcc-----------cccce
Confidence            4455788888887776655    35566678899999999999999999988775544433210           0111 


Q ss_pred             eEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCC
Q 030139          113 VMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK  175 (182)
Q Consensus       113 ~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~  175 (182)
                      .+.+.  ..++||.++||||+++||+|+..+.+.|.+.||++|.+++.|..+.....+++...
T Consensus       205 ~m~LV--GDv~gkvailVDDm~dt~GTl~~aa~~L~~~GA~kV~a~~THgVfs~~a~er~~~s  265 (316)
T KOG1448|consen  205 RMVLV--GDVKGKVAILVDDMADTCGTLIKAADKLLEHGAKKVYAIVTHGVFSGPAIERLNES  265 (316)
T ss_pred             EEEEE--eccCCcEEEEecccccccchHHHHHHHHHhcCCceEEEEEcceeccccHHHHhhhc
Confidence            22332  34899999999999999999999999999999999999999999999999988764

>PRK00129 upp uracil phosphoribosyltransferase; Reviewed

Probab=99.17  E-value=2.3e-10  Score=90.55  Aligned_cols=100  Identities=22%  Similarity=0.285  Sum_probs=73.3

Q ss_pred             cEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHH
Q 030139           63 SVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLS  141 (182)
Q Consensus        63 d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~  141 (182)
                      -++|++.++|++++..+++.++ .++..+...+.. ..         .+....+.......+|++||||||+++||+|+.
T Consensus        72 ~vvV~IlrgG~~~~~~l~~~l~~~~~~~i~~~r~~-~t---------~~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl~  141 (209)
T PRK00129         72 LVIVPILRAGLGMVDGVLKLIPSARVGHIGLYRDE-ET---------LEPVEYYVKLPEDIDERTVIVVDPMLATGGSAI  141 (209)
T ss_pred             EEEEEEeCCCHHHHHHHHHhCCcCeeeeEEEEeCC-CC---------CCCEEEEeeCCCcCCCCEEEEECCcccchHHHH
Confidence            4889999999999999999997 354444332210 00         000111222233478999999999999999999


Q ss_pred             HHHHHHHhcCCeEEEEEEEEecCCcccccccCC
Q 030139          142 AAIRLLERVGVHVVECACVIELPELKGRERLGE  174 (182)
Q Consensus       142 ~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~  174 (182)
                      .+++.|++.|++.+.+++++..+  .+.+++.+
T Consensus       142 ~ai~~L~~~G~~~I~~~~ll~~~--~gl~~l~~  172 (209)
T PRK00129        142 AAIDLLKKRGAKNIKVLCLVAAP--EGIKALEE  172 (209)
T ss_pred             HHHHHHHHcCCCEEEEEEEecCH--HHHHHHHH
Confidence            99999999999999999998775  67777653

>COG2065 PyrR Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=99.12  E-value=1.3e-09  Score=81.79  Aligned_cols=115  Identities=23%  Similarity=0.303  Sum_probs=77.6

Q ss_pred             hcCHHHHHHHHHHHHHHhc----CCCccEEEeeCCCChhhHHHHHHHhC------CCeEeeeccCCCCCceeeeeeeeec
Q 030139           40 LLDTKAFRDTIDLFVERYK----DKNISVVAGIEARGFIFGPPIALAIG------AKFVPMRKPKKLPGEVISEEYSLEY  109 (182)
Q Consensus        40 ~~~~~~~~~~~~~la~~~~----~~~~d~Iv~v~~~G~~~a~~la~~l~------vp~~~~rk~~~~~~~~~~~~~~~~~  109 (182)
                      +.|++.++.....++.++-    +.+.-+++|+..+|.++|..+++.++      +|+..+--.          -|+.+.
T Consensus         6 ild~~~i~RtitRia~eIiErnk~~~~~vlvGIktrGv~lA~rl~~~i~~~Eg~~vp~g~lDIt----------~yRDDl   75 (179)
T COG2065           6 ILDEAAIRRTITRIAHEIIERNKGLDNLVLVGIKTRGVPLAERLAERIEELEGIEVPVGELDIT----------LYRDDL   75 (179)
T ss_pred             eCCHHHHHHHHHHHHHHHHHHhCCCCceEEEeEecCCHHHHHHHHHHHHHHhCCCCCeeeEEeE----------Eeechh
Confidence            4566666655555554443    34556999999999999999999873      455332110          111110


Q ss_pred             cc-e---e-EEE-EccccCCCCeEEEEecccCchHHHHHHHHHHHhcCC-eEEEEEEEEecC
Q 030139          110 GK-D---V-MEM-HVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGV-HVVECACVIELP  164 (182)
Q Consensus       110 ~~-~---~-~~l-~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga-~~v~v~~l~~~~  164 (182)
                      .. +   . ..- .......||+|+|||||+-||.|+++++++|...|- ..+..+|+++++
T Consensus        76 ~~~~~~~p~~~~t~~~~di~~k~VILVDDVLytGRTIRAAldal~d~GRPa~I~LavLVDRG  137 (179)
T COG2065          76 TQKGPLRPQAKTTILPFDITGKRVILVDDVLYTGRTIRAALDALVDYGRPAKIQLAVLVDRG  137 (179)
T ss_pred             hhcCccCCcccCccCcccccCCEEEEEeeecccCccHHHHHHHHHhcCCcceEEEEEEEcCC
Confidence            00 0   0 000 002347899999999999999999999999999975 689999999986

>TIGR01091 upp uracil phosphoribosyltransferase

Probab=99.09  E-value=7.6e-10  Score=87.46  Aligned_cols=98  Identities=23%  Similarity=0.281  Sum_probs=71.8

Q ss_pred             cEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeecccee-EEEEccccCCCCeEEEEecccCchHHH
Q 030139           63 SVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDV-MEMHVGAVQAGERALIVDDLVATGGTL  140 (182)
Q Consensus        63 d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~gk~VllVDDvitTG~Tl  140 (182)
                      -++|++.++|++++..+++.+. .++..+...+..           +..+.. .+.......+|++||||||+++||+|+
T Consensus        70 i~~V~ILrgg~~~~~~l~~~l~~~~v~~i~~~r~~-----------~t~~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl  138 (207)
T TIGR01091        70 IVLVPILRAGLGMVDGVLKLIPEAKVGHVGAYRNE-----------ETLKPVPYYSKLPEDIDERTVIVLDPMLATGGTM  138 (207)
T ss_pred             EEEEEEeCCcHHHHHHHHHhCCcCceeEEEEEeCC-----------CCCCCEEEEecCCCCCCCCEEEEECCCccchHHH
Confidence            5788899999999999999986 344433322210           001111 111223347899999999999999999


Q ss_pred             HHHHHHHHhcCCeEEEEEEEEecCCcccccccC
Q 030139          141 SAAIRLLERVGVHVVECACVIELPELKGRERLG  173 (182)
Q Consensus       141 ~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~  173 (182)
                      ..+++.|++.|++.+.+++++..+  .+.+++.
T Consensus       139 ~~ai~~L~~~G~~~I~v~~ll~~~--~gl~~l~  169 (207)
T TIGR01091       139 IAALDLLKKRGAKKIKVLSIVAAP--EGIEAVE  169 (207)
T ss_pred             HHHHHHHHHcCCCEEEEEEEecCH--HHHHHHH
Confidence            999999999999999999998775  6666665

that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.

>COG1926 Predicted phosphoribosyltransferases [General function prediction only]

Probab=99.08  E-value=2.7e-09  Score=83.25  Aligned_cols=113  Identities=19%  Similarity=0.253  Sum_probs=73.8

Q ss_pred             HHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCe--EeeeccCCCCCc-e------------ee--e--eee
Q 030139           49 TIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGE-V------------IS--E--EYS  106 (182)
Q Consensus        49 ~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~--~~~rk~~~~~~~-~------------~~--~--~~~  106 (182)
                      .++.|+..+..   .+..+++++|+||++.|.++|+.||.|+  .++||-....++ .            ..  .  .+.
T Consensus        10 AGr~La~~l~~~~~~~~~iVlaLpRGGvpva~evA~~lga~ldvliVrKiG~P~n~E~aiGAvae~g~~v~n~~~~~~~~   89 (220)
T COG1926          10 AGRKLAQELAALRDLKDVIVLALPRGGVPVAFEVAQALGAPLDVLIVRKIGAPGNPELAIGAVAEGGDVVLNYDVVRSLG   89 (220)
T ss_pred             HHHHHHHHHHhhccCCCcEEEEecCCCchHHHHHHHHhCCCeeEEEEeecCCCCCchhceeeeccCCcEecchhhhhhcc
Confidence            44445444443   2455999999999999999999999997  446665432111 0            00  0  000


Q ss_pred             eecc-------c--eeE-----EEEc-c--ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEE
Q 030139          107 LEYG-------K--DVM-----EMHV-G--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI  161 (182)
Q Consensus       107 ~~~~-------~--~~~-----~l~~-~--~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~  161 (182)
                      .+..       .  ..+     .... +  ...+|++|+||||-+.||.||.++++.+++.+++.+.+++=+
T Consensus        90 i~~~~i~~~~~~e~~El~rrr~~yr~~~~~~~~~g~~VIlVDDGiATGatm~aAi~~~r~~~~~~IviAVPV  161 (220)
T COG1926          90 IDDAYIEAAAARERKELLRRREAYRGGRPVPSLKGRTVILVDDGIATGATMKAAVRALRAKGPKEIVIAVPV  161 (220)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEEeCCcchhHHHHHHHHHHHhcCCceEEEEccc
Confidence            0000       0  000     0011 1  237899999999999999999999999999999987776544

>KOG3367 consensus Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=99.02  E-value=3.6e-09  Score=80.05  Aligned_cols=124  Identities=16%  Similarity=0.270  Sum_probs=87.8

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHh-C------CCeEe--eeccCCCCCc
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAI-G------AKFVP--MRKPKKLPGE   99 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l-~------vp~~~--~rk~~~~~~~   99 (182)
                      .+-|++.++.-+.++..-.+.||..+.+   .++-+.+|+..||+.+-+.+-+++ +      +|+.+  +|-++     
T Consensus        28 y~~Dls~v~ip~gli~dr~~rlakDi~~~~g~~~i~~lcVlkG~ykF~adLve~l~n~~s~~~~pmtvDFIR~kS-----  102 (216)
T KOG3367|consen   28 YTGDLSGVVIPHGLIRDRVERLAKDIMKEIGNKPIIFLCVLKGGYKFFADLVERLKNRNSDRPLPMTVDFIRAKS-----  102 (216)
T ss_pred             ecccccccccccchhhhHHHHhhhhhhhccCCCceEEEEEecchhHHHHHHHHHHhhcccCCCcceeeeeeehhh-----
Confidence            3456666666677777888888877654   355688999999998877777775 3      45432  33222     


Q ss_pred             eeeeeeeeeccceeEEE-Ecc--ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139          100 VISEEYSLEYGKDVMEM-HVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus       100 ~~~~~~~~~~~~~~~~l-~~~--~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                           |..+...+.+.+ ..+  ....||+||||||+++||.||...++.+++.+++.+.++.++.+..
T Consensus       103 -----Y~n~~stg~iqiig~d~l~~ltgK~VliVeDIvdTGrTl~~Lls~~~~~k~~~v~vasLL~Krt  166 (216)
T KOG3367|consen  103 -----YCNDQSTGDIQIIGGDDLSTLTGKNVLIVEDIVDTGRTLSTLLSHMKAYKPSMVKVASLLVKRT  166 (216)
T ss_pred             -----hcCCcccCCceeecCCCHHHhcCCcEEEEEeeccccchHHHHHHHHHhcCccceeeeeeccccc
Confidence                 211111111111 111  2378999999999999999999999999999999999999998764

>KOG0572 consensus Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]

Probab=98.99  E-value=1e-09  Score=92.13  Aligned_cols=114  Identities=18%  Similarity=0.202  Sum_probs=80.5

Q ss_pred             HHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeee--ecc-ceeEEEEcccc
Q 030139           45 AFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSL--EYG-KDVMEMHVGAV  121 (182)
Q Consensus        45 ~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~--~~~-~~~~~l~~~~~  121 (182)
                      ....+++.||.. ...+.|+|+++|.+|..-|...|...|+||.....+.+.-+.+..++.+.  ..+ +..|..- ...
T Consensus       276 ~R~~~G~~LA~e-~P~d~DvVi~VPdS~~~aAlgyA~~sG~py~e~l~rnrYvGRTFI~P~q~iR~~~V~~Kl~~l-~~~  353 (474)
T KOG0572|consen  276 VRLQCGEQLATE-APVDADVVIPVPDSGTTAALGYAAKSGLPYQEVLIRNRYVGRTFIEPNQRIRQLGVKKKLGPL-RQN  353 (474)
T ss_pred             HHHHHHhHhhhc-CCcccceEEecCCchhHHHHHHHHHhCCchhhhhhhcccccceecCccHHHHHhhhhhhcccc-hhh
Confidence            444677777763 23589999999999999999999999999976543333323322211110  000 0112111 234


Q ss_pred             CCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEE
Q 030139          122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV  160 (182)
Q Consensus       122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l  160 (182)
                      .+||||+||||.|..|.|+...+++|+++||++|++...
T Consensus       354 ~~GKrvvlVDDSIVRGtTs~~IVkmlreaGAkeVh~riA  392 (474)
T KOG0572|consen  354 FEGKRVVLVDDSIVRGTTSSPIVKMLREAGAKEVHIRIA  392 (474)
T ss_pred             cCCceEEEEecceeccCchHHHHHHHHHcCCcEEEEEec
Confidence            789999999999999999999999999999999987644

>PF15609 PRTase_2: Phosphoribosyl transferase

Probab=98.77  E-value=2.2e-07  Score=71.86  Aligned_cols=136  Identities=18%  Similarity=0.243  Sum_probs=93.8

Q ss_pred             CCCceEEechh-----hhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHhCCCeEeee-ccCCCCCc
Q 030139           28 KPGIMFQDITT-----LLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMR-KPKKLPGE   99 (182)
Q Consensus        28 ~~~~~~~d~~~-----l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~r-k~~~~~~~   99 (182)
                      +++++|  ++.     +..+|..+...+..|+..+.+  .+.-+++|..+.+..++..+++.++-...++. .++..++.
T Consensus        15 KR~fLf--VSkVLGKHiPv~P~~~~~~~~~La~~~~~~~~~~~lvIGfAETATgLG~~V~~~~~~~~~ylhTTR~~v~~~   92 (191)
T PF15609_consen   15 KRAFLF--VSKVLGKHIPVRPSVMRDAGRLLAAQVPEALPGPVLVIGFAETATGLGHGVFDALGAACLYLHTTREPVPGV   92 (191)
T ss_pred             CceeEE--EecccCcccCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEEhHHHHHHHHHHHHHhhhccceeeeccccCCCC
Confidence            456655  343     455899999999999998876  36789999999999999999999974443333 33344442


Q ss_pred             eeeeeeeeeccce--e-EEEEc-cccCCCCeEEEEecccCchHHHHHHHHHHHhcCC-eEEEEEEEEecCC
Q 030139          100 VISEEYSLEYGKD--V-MEMHV-GAVQAGERALIVDDLVATGGTLSAAIRLLERVGV-HVVECACVIELPE  165 (182)
Q Consensus       100 ~~~~~~~~~~~~~--~-~~l~~-~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga-~~v~v~~l~~~~~  165 (182)
                      ...-.|..++...  . ++... ..+...+.+++|||-+|||.|...+++.|.+.-+ +.+.++++++-..
T Consensus        93 ~~~~~F~E~HSHAt~h~ly~~~~~~l~~~~~lVLVDDEiSTG~T~lnli~al~~~~p~~~yvvasL~d~~~  163 (191)
T PF15609_consen   93 PPLLEFEEEHSHATDHLLYPPDPDLLRNARTLVLVDDEISTGNTFLNLIRALHAKYPRKRYVVASLLDWRS  163 (191)
T ss_pred             ccceeeeccccccccceecCCChHHhcCCCCEEEEecCccchHHHHHHHHHHHHhCCCceEEEEEEeeCCC
Confidence            2222333333322  2 22211 1334577899999999999999999999988755 4567777777643

>PLN02541 uracil phosphoribosyltransferase

Probab=98.13  E-value=1.4e-05  Score=64.69  Aligned_cols=50  Identities=36%  Similarity=0.628  Sum_probs=41.6

Q ss_pred             CCCCeEEEEecccCchHHHHHHHHHHHhcCCe--EEEEEEEEecCCcccccccC
Q 030139          122 QAGERALIVDDLVATGGTLSAAIRLLERVGVH--VVECACVIELPELKGRERLG  173 (182)
Q Consensus       122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~--~v~v~~l~~~~~~~~~~~l~  173 (182)
                      ..+++|+|+||++.||+|+..+++.|++.|+.  .+.+++++.-+  .|.+++.
T Consensus       155 ~~~~~VlllDpmLATGgS~~~ai~~L~~~Gv~~~~I~~v~~ias~--~Gl~~i~  206 (244)
T PLN02541        155 PEGSRVLVVDPMLATGGTIVAAIDELVSRGASVEQIRVVCAVAAP--PALKKLS  206 (244)
T ss_pred             CCCCEEEEECcchhhhHHHHHHHHHHHHcCCCcccEEEEEEEECH--HHHHHHH
Confidence            34779999999999999999999999999997  67777777654  5666654

>KOG1503 consensus Phosphoribosylpyrophosphate synthetase-associated protein [Amino acid transport and metabolism; Nucleotide transport and metabolism]

Probab=97.92  E-value=0.00018  Score=57.77  Aligned_cols=139  Identities=17%  Similarity=0.136  Sum_probs=93.6

Q ss_pred             echhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCC-----------Cceeee
Q 030139           35 DITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP-----------GEVISE  103 (182)
Q Consensus        35 d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~-----------~~~~~~  103 (182)
                      -..++-.+|-+++.    +.+.+++++..+||+-..+...-|...|+.|.+.+..+.-..+..           -+....
T Consensus       145 pvdnlraspfllqy----iqe~ipdyrnavivaksp~~akka~syaerlrlglavihge~k~~e~d~~dgr~spp~~~~~  220 (354)
T KOG1503|consen  145 PVDNLRASPFLLQY----IQEEIPDYRNAVIVAKSPGVAKKAQSYAERLRLGLAVIHGEQKDTESDLVDGRHSPPPVVTA  220 (354)
T ss_pred             cccccccCHHHHHH----HHHhCccccceEEEecCcchhhHHHhHHHHHhhceeEeeccccccccccccCCcCCCCcccc
Confidence            34455556655544    445556777778898888888999999999987776553222110           011000


Q ss_pred             --eeeee------ccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCC
Q 030139          104 --EYSLE------YGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK  175 (182)
Q Consensus       104 --~~~~~------~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~  175 (182)
                        .-..+      ..+..+.+.  ..+.|+-.++|||+++.-.+--++.+.|++.||-.+.+++.|+..+..+-..|++.
T Consensus       221 t~~~~~~lp~~~~k~kppltvv--gdvggriaimvddiiddvqsfvaaae~lkergaykiyv~athgllssdapr~lees  298 (354)
T KOG1503|consen  221 TTHPSLELPAQISKEKPPLTVV--GDVGGRIAIMVDDIIDDVQSFVAAAEVLKERGAYKIYVMATHGLLSSDAPRLLEES  298 (354)
T ss_pred             ccCccccCchhhcccCCCeEEE--eccCceEEEEehhhHHhHHHHHHHHHHHHhcCceEEEEEeecccccccchhhhhcC
Confidence              00000      001122222  23678889999999999999999999999999999999999998877777777777


Q ss_pred             Cccc
Q 030139          176 PLFV  179 (182)
Q Consensus       176 ~~~~  179 (182)
                      |+..
T Consensus       299 ~ide  302 (354)
T KOG1503|consen  299 PIDE  302 (354)
T ss_pred             CCce
Confidence            7654

>COG0035 Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=97.84  E-value=6.9e-05  Score=58.95  Aligned_cols=98  Identities=20%  Similarity=0.276  Sum_probs=67.2

Q ss_pred             EEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeEEE-EccccCCCCeEEEEecccCchHHHH
Q 030139           64 VVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVMEM-HVGAVQAGERALIVDDLVATGGTLS  141 (182)
Q Consensus        64 ~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~gk~VllVDDvitTG~Tl~  141 (182)
                      ++|++-+.|..+...+.+... .+...+--.|. +          +..+...+. +.....+++.|+|+|=++.||+|+.
T Consensus        73 ~~V~ILRAGl~m~~gl~~~~P~a~vG~ig~~Rd-e----------et~~p~~yy~KLP~~~~~~~viv~DPMLATG~s~i  141 (210)
T COG0035          73 VIVPILRAGLGMVEGLLKLIPSARVGHIGIYRD-E----------ETLEPVLYYEKLPEDIDERTVIVLDPMLATGGSAI  141 (210)
T ss_pred             EEEEEeeccccHHHHHHHhCCcceEEEEEEEec-C----------ccCceehhHHhCCCcccCCeEEEECchhhccHhHH
Confidence            567788999999999998763 12211111110 0          111111111 1133478999999999999999999


Q ss_pred             HHHHHHHhc-CCeEEEEEEEEecCCcccccccCC
Q 030139          142 AAIRLLERV-GVHVVECACVIELPELKGRERLGE  174 (182)
Q Consensus       142 ~~~~~L~~~-ga~~v~v~~l~~~~~~~~~~~l~~  174 (182)
                      .+++.|++. |++.+.+++++.-+  .|.+++.+
T Consensus       142 ~ai~~L~~~G~~~~I~~v~~vAap--eGi~~v~~  173 (210)
T COG0035         142 AAIDLLKKRGGPKNIKVVSLVAAP--EGIKAVEK  173 (210)
T ss_pred             HHHHHHHHhCCCceEEEEEEEecH--HHHHHHHH
Confidence            999999999 88999999998876  56666543

>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C

Probab=97.79  E-value=0.00019  Score=56.73  Aligned_cols=98  Identities=23%  Similarity=0.278  Sum_probs=66.1

Q ss_pred             cEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeEEE-EccccCCCCeEEEEecccCchHHH
Q 030139           63 SVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVMEM-HVGAVQAGERALIVDDLVATGGTL  140 (182)
Q Consensus        63 d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~gk~VllVDDvitTG~Tl  140 (182)
                      -++|++.++|.++...+.+.+. .++..+.-.+..           +..+..++. +.+....+++|+|+|-++.||+|+
T Consensus        69 i~~V~IlRaG~~m~~~~~~~~p~a~~g~i~i~r~~-----------~t~~p~~~y~~LP~~i~~~~VillDpmlaTG~s~  137 (207)
T PF14681_consen   69 ICIVPILRAGLPMLEGFREVFPDARVGHIGIQRDE-----------ETLEPVLYYNKLPEDIENRKVILLDPMLATGGSA  137 (207)
T ss_dssp             EEEEEETTTHHHHHHHHHHHSTTSEEEEEEEEEET-----------TTSSEEEEEEE--TTGTTSEEEEEESEESSSHHH
T ss_pred             EEEEEEeCCcHHHHHHHHHhCCCcceEEEEEEEcC-----------CccceeeeHhhCCCCccCCEEEEEeccccchhhH
Confidence            4788888999999999999873 344332211100           011111221 223335889999999999999999


Q ss_pred             HHHHHHHHhcCC--eEEEEEEEEecCCcccccccC
Q 030139          141 SAAIRLLERVGV--HVVECACVIELPELKGRERLG  173 (182)
Q Consensus       141 ~~~~~~L~~~ga--~~v~v~~l~~~~~~~~~~~l~  173 (182)
                      ..+++.|++.|.  +.+.+++++.-+  .|.+++.
T Consensus       138 ~~ai~~L~~~G~~~~~I~~v~~ias~--~Gl~~l~  170 (207)
T PF14681_consen  138 IAAIEILKEHGVPEENIIIVSVIASP--EGLERLL  170 (207)
T ss_dssp             HHHHHHHHHTTG-GGEEEEEEEEEEH--HHHHHHH
T ss_pred             HHHHHHHHHcCCCcceEEEEEEEecH--HHHHHHH
Confidence            999999999887  577777777654  5666655

...

>PF15610 PRTase_3: PRTase ComF-like

Probab=96.15  E-value=0.086  Score=43.20  Aligned_cols=117  Identities=10%  Similarity=0.136  Sum_probs=67.3

Q ss_pred             hhhcCHHHHHHHHHHHHHHhcC------CCccEEEeeC--CCChhhHHHHHHH-----h-------CCCe-EeeeccCCC
Q 030139           38 TLLLDTKAFRDTIDLFVERYKD------KNISVVAGIE--ARGFIFGPPIALA-----I-------GAKF-VPMRKPKKL   96 (182)
Q Consensus        38 ~l~~~~~~~~~~~~~la~~~~~------~~~d~Iv~v~--~~G~~~a~~la~~-----l-------~vp~-~~~rk~~~~   96 (182)
                      -.++|...++.+|+.|+..|-.      ..-|-||.++  ...+|-|+..-..     |       |.|- ..+.-.|..
T Consensus        27 fKfGd~~~A~~fg~~La~~fi~~~~~~~~~~d~iV~~~Sp~~~IPTAsn~L~~~Fv~~LNr~L~~~~~~~~~~~ki~R~~  106 (274)
T PF15610_consen   27 FKFGDDRVAEQFGRELADGFIAQFSNALLTHDQIVMMPSPYRSIPTASNVLCDHFVKELNRHLAHNGAPPVIEVKIHRNQ  106 (274)
T ss_pred             eecCCHHHHHHHHHHHHHHHHHhhHhhhccCceEEEecCccccCccHHHHHHHHHHHHHHHHHHHcCCCcceEeeecccc
Confidence            3688999999999999876532      1234444444  3666655433222     2       3332 222211111


Q ss_pred             C--Cceeeeee--e-eeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEE
Q 030139           97 P--GEVISEEY--S-LEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVV  155 (182)
Q Consensus        97 ~--~~~~~~~~--~-~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v  155 (182)
                      +  +....-++  + .....+.+.+.. ...+|+.||++|||-.||++-..+.+.+++.|++..
T Consensus       107 ty~~DYg~Ls~edR~~li~nd~y~ID~-~~l~gk~lIflDDIkITGshE~~V~~~~~~~~~~~~  169 (274)
T PF15610_consen  107 TYCEDYGNLSFEDRKSLISNDTYHIDK-EFLSGKHLIFLDDIKITGSHEDKVRKILKEYGLEND  169 (274)
T ss_pred             CcccccccCCHHhhhccccCCceEecH-HHhCCcEEEEeccEEecCcHHHHHHHHHHHcCcccc
Confidence            0  11100000  0 000112233332 346999999999999999999999999999999863

>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B

Probab=93.57  E-value=1.5  Score=31.37  Aligned_cols=75  Identities=16%  Similarity=0.192  Sum_probs=43.9

Q ss_pred             CCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc--hH--HHHHHHH
Q 030139           70 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT--GG--TLSAAIR  145 (182)
Q Consensus        70 ~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT--G~--Tl~~~~~  145 (182)
                      .+.-.+|..+|+.||.+.......+...            |  ..++......+|++|+||-.....  -.  -+.-+++
T Consensus         7 ~~~~~La~~ia~~L~~~~~~~~~~~F~d------------G--E~~v~i~~~v~g~dv~iiqs~~~~~nd~lmeLll~i~   72 (116)
T PF13793_consen    7 SSSQDLAERIAEALGIPLGKVETKRFPD------------G--ETYVRIPESVRGKDVFIIQSTSPPVNDNLMELLLLID   72 (116)
T ss_dssp             SSGHHHHHHHHHHTTS-EE-EEEEE-TT------------S---EEEEESS--TTSEEEEE---SSSHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhCCceeeeEEEEcCC------------C--CEEEEecccccCCceEEEEecCCchhHHHHHHHHHHH
Confidence            3445899999999999886653222111            2  223333445789999999998875  22  3455678


Q ss_pred             HHHhcCCeEEEEE
Q 030139          146 LLERVGVHVVECA  158 (182)
Q Consensus       146 ~L~~~ga~~v~v~  158 (182)
                      +++..|++.|.++
T Consensus        73 a~r~~~a~~i~~V   85 (116)
T PF13793_consen   73 ALRRAGAKRITLV   85 (116)
T ss_dssp             HHHHTTBSEEEEE
T ss_pred             HHHHcCCcEEEEe
Confidence            8899999866543

...

>KOG1017 consensus Predicted uracil phosphoribosyltransferase [General function prediction only]

Probab=93.56  E-value=0.24  Score=39.01  Aligned_cols=61  Identities=18%  Similarity=0.300  Sum_probs=42.5

Q ss_pred             cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeE--EEEEEEEecCCcccccccCCCCcccc
Q 030139          119 GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHV--VECACVIELPELKGRERLGEKPLFVL  180 (182)
Q Consensus       119 ~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~--v~v~~l~~~~~~~~~~~l~~~~~~~l  180 (182)
                      ...+..++|||+=-+++||.|+..+++.|++.|...  +....+.-.+ ..++....+.|...+
T Consensus       184 ppDI~sR~VLLmYPi~stGnTV~~Av~VL~EhgVp~s~IiL~sLF~tP-~gak~i~~~fP~iti  246 (267)
T KOG1017|consen  184 PPDITSRRVLLMYPIISTGNTVCKAVEVLKEHGVPDSNIILVSLFITP-TGAKNITRKFPYITI  246 (267)
T ss_pred             CCcccceeEEEEeeeecCCccHHHHHHHHHHcCCCcccEEEEEeeecc-hhhHHHHHhCCeEEE
Confidence            345678899999999999999999999999999854  3333333332 234444555665443

>KOG1377 consensus Uridine 5'- monophosphate synthase/orotate phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=91.92  E-value=0.56  Score=38.03  Aligned_cols=123  Identities=17%  Similarity=0.148  Sum_probs=66.9

Q ss_pred             EEechhhhcCHHHHHHHHHHHHHHhcC--CCccE--EEeeCCCC-hhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeee
Q 030139           33 FQDITTLLLDTKAFRDTIDLFVERYKD--KNISV--VAGIEARG-FIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSL  107 (182)
Q Consensus        33 ~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~--Iv~v~~~G-~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~  107 (182)
                      |.|.+ ....+..+..+++.++..+-+  ..+|+  +++++..| ..-+..-|...+++.+..+..-+.   +..+. -.
T Consensus        65 ~~df~-~~~~~k~L~aLA~a~~f~I~edrkffDigntvg~qY~gg~~kia~wadl~n~h~v~g~~i~~g---~~rk~-~k  139 (261)
T KOG1377|consen   65 FFDFS-LFNSGKDLRALAQAYAFLIFEDRKFFDIGNTVGLQYKGGPLKIASWADLVNAHGVPGRGIIKG---LNRKL-LK  139 (261)
T ss_pred             eeccc-ccccHHHHHHHHHHHHHHHHhhhhcccccceeccccccchHHHHHHHHHHhccCcccchHHHH---Hhhhc-cc
Confidence            44444 555788888999988876644  46899  99999888 455556666666655443311000   00000 00


Q ss_pred             eccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          108 EYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       108 ~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                      ++++...-+  ....++|.+|+.||+.++|.-+.+.  ...-....+.+..+..++.
T Consensus       140 ~~~egG~ll--lAems~kg~L~~~dy~ea~~aI~ee--~~d~~~G~v~g~~~~ldrq  192 (261)
T KOG1377|consen  140 DHGEGGVLL--LAELSSKGSLITGDYTEAATAIAEE--DIDFVNGFVAGSIVALDRQ  192 (261)
T ss_pred             cCCCCceEE--EEEeccCCceeehhHHHHHHHHHHh--hhchheeEEeeeeeeccHH
Confidence            112222222  2336688899999966655555554  2222233445555555543

>PRK02812 ribose-phosphate pyrophosphokinase; Provisional

Probab=90.00  E-value=4.9  Score=34.06  Aligned_cols=81  Identities=11%  Similarity=0.138  Sum_probs=51.0

Q ss_pred             cEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc-hHH--
Q 030139           63 SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GGT--  139 (182)
Q Consensus        63 d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT-G~T--  139 (182)
                      +.++-.-.+.-.+|..+|+.||++...+..++...            |  +.+++....+.|++|+||-..... ...  
T Consensus        21 ~~~i~~g~~~~~la~~ia~~lg~~l~~~~~~~FpD------------G--E~~v~i~~~vrg~~V~ivqs~~~p~nd~l~   86 (330)
T PRK02812         21 RLRLFSGSSNPALAQEVARYLGMDLGPMIRKRFAD------------G--ELYVQIQESIRGCDVYLIQPTCAPVNDHLM   86 (330)
T ss_pred             CEEEEECCCCHHHHHHHHHHhCCCceeeEEEECCC------------C--CEEEEeCCCCCCCEEEEECCCCCCccHHHH
Confidence            33343345667999999999999876543222211            2  223333344789999999885432 222  


Q ss_pred             -HHHHHHHHHhcCCeEEEE
Q 030139          140 -LSAAIRLLERVGVHVVEC  157 (182)
Q Consensus       140 -l~~~~~~L~~~ga~~v~v  157 (182)
                       +.-+++.+++.|++.+.+
T Consensus        87 eLll~~~alr~~ga~ri~~  105 (330)
T PRK02812         87 ELLIMVDACRRASARQITA  105 (330)
T ss_pred             HHHHHHHHHHHhCCceEEE
Confidence             456677888999986553

>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional

Probab=89.90  E-value=4.3  Score=35.80  Aligned_cols=81  Identities=12%  Similarity=0.115  Sum_probs=50.5

Q ss_pred             cEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc-hH---
Q 030139           63 SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GG---  138 (182)
Q Consensus        63 d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT-G~---  138 (182)
                      +.++-.-.+.-.+|..+|..||+++..+..++..++              ..+++....+.|+.|+||-..... -.   
T Consensus       119 ~m~I~sgs~~~~LA~~IA~~Lg~~l~~~~~~rFpDG--------------E~~Vri~e~VrG~dV~IVqS~~~pvNd~Lm  184 (439)
T PTZ00145        119 NAILFSGSSNPLLSKNIADHLGTILGRVHLKRFADG--------------EVSMQFLESIRGKDVYIIQPTCPPVNENLI  184 (439)
T ss_pred             CeEEEECCCCHHHHHHHHHHhCCCceeeEEEECCCC--------------CEEEEECCCcCCCeEEEEecCCCCCcHHHH
Confidence            344444455679999999999998866543322122              222332344789999999875432 11   


Q ss_pred             HHHHHHHHHHhcCCeEEEE
Q 030139          139 TLSAAIRLLERVGVHVVEC  157 (182)
Q Consensus       139 Tl~~~~~~L~~~ga~~v~v  157 (182)
                      -+.-+++.++.+||+.|.+
T Consensus       185 ELLllidAlr~agAkrItl  203 (439)
T PTZ00145        185 ELLLMISTCRRASAKKITA  203 (439)
T ss_pred             HHHHHHHHHHHhccCeEEE
Confidence            2344567778999986554

>PRK00553 ribose-phosphate pyrophosphokinase; Provisional

Probab=87.89  E-value=7.7  Score=32.90  Aligned_cols=80  Identities=14%  Similarity=0.055  Sum_probs=49.3

Q ss_pred             EEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc-hHH---
Q 030139           64 VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GGT---  139 (182)
Q Consensus        64 ~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT-G~T---  139 (182)
                      .++-.-.+.-.+|..+|+.||++...+..++...            |  +.+++....++|+.|+||=++... -..   
T Consensus        10 ~~i~~~~~~~~La~~ia~~lg~~l~~~~~~~Fpd------------G--E~~v~i~~~vrg~dV~ivqs~~~p~nd~l~e   75 (332)
T PRK00553         10 HVIFSLSKAKKLVDSICRKLSMKPGEIVIQKFAD------------G--ETYIRFDESVRNKDVVIFQSTCSPVNDSLME   75 (332)
T ss_pred             eEEEECCCCHHHHHHHHHHhCCceeeeEEEECCC------------C--CEEEEECCCCCCCEEEEEcCCCCCCchHHHH
Confidence            3333334556899999999999886553322211            2  222332344789999999876432 111   


Q ss_pred             HHHHHHHHHhcCCeEEEE
Q 030139          140 LSAAIRLLERVGVHVVEC  157 (182)
Q Consensus       140 l~~~~~~L~~~ga~~v~v  157 (182)
                      +.-+++.+++.||+.+.+
T Consensus        76 Lll~~~alr~~~a~~i~~   93 (332)
T PRK00553         76 LLIAIDALKRGSAKSITA   93 (332)
T ss_pred             HHHHHHHHHHcCCCeEEE
Confidence            445667788999986544

>PLN02369 ribose-phosphate pyrophosphokinase

Probab=87.57  E-value=4.5  Score=33.80  Aligned_cols=70  Identities=13%  Similarity=0.167  Sum_probs=44.4

Q ss_pred             hhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc--hHH--HHHHHHHHHh
Q 030139           74 IFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT--GGT--LSAAIRLLER  149 (182)
Q Consensus        74 ~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT--G~T--l~~~~~~L~~  149 (182)
                      .+|..+|+.+|+++.....++...            |+  .+++....++|++|+||-.....  -..  +.-+++.+++
T Consensus         2 ~lA~~ia~~lg~~l~~~~~~~Fpd------------GE--~~v~i~~~v~g~~V~iv~s~~~p~nd~l~eLl~~~~a~r~   67 (302)
T PLN02369          2 ALSQEIACYLGLELGKITIKRFAD------------GE--IYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRR   67 (302)
T ss_pred             hHHHHHHHHhCCceeeeEEEECCC------------CC--EEEEECCCCCCCeEEEEecCCCCcchHHHHHHHHHHHHHH
Confidence            478999999999986654332212            22  22222344689999999886522  222  4566788889


Q ss_pred             cCCeEEEE
Q 030139          150 VGVHVVEC  157 (182)
Q Consensus       150 ~ga~~v~v  157 (182)
                      .|++.+.+
T Consensus        68 ~~a~~i~~   75 (302)
T PLN02369         68 ASAKRITA   75 (302)
T ss_pred             cCCCeEEE
Confidence            99986543

>PRK00934 ribose-phosphate pyrophosphokinase; Provisional

Probab=87.56  E-value=6.4  Score=32.52  Aligned_cols=74  Identities=12%  Similarity=0.191  Sum_probs=46.7

Q ss_pred             CCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchH---HHHHHHHH
Q 030139           70 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGG---TLSAAIRL  146 (182)
Q Consensus        70 ~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~---Tl~~~~~~  146 (182)
                      .+.-.+|..+|+.+|+++.....++...            |+  .+++....+.|++|+|+-....-..   -+.-+++.
T Consensus         6 ~~~~~la~~ia~~l~~~~~~~~~~~Fpd------------GE--~~v~i~~~v~g~~v~i~~~~~~~~d~l~ell~~~~a   71 (285)
T PRK00934          6 SASQLLASEVARLLNTELALVETKRFPD------------GE--LYVRILGEIDGEDVVIISTTYPQDENLVELLLLIDA   71 (285)
T ss_pred             CCCHHHHHHHHHHHCCceEeeEEEECCC------------CC--EEEEECCCcCCCEEEEEeCCCCCcHHHHHHHHHHHH
Confidence            3446899999999999987654333222            22  1222223478999988876433233   24456778


Q ss_pred             HHhcCCeEEEE
Q 030139          147 LERVGVHVVEC  157 (182)
Q Consensus       147 L~~~ga~~v~v  157 (182)
                      +++.|++.+.+
T Consensus        72 lr~~ga~~i~~   82 (285)
T PRK00934         72 LRDEGAKSITL   82 (285)
T ss_pred             HHHcCCCeEEE
Confidence            88999986654

>PRK02269 ribose-phosphate pyrophosphokinase; Provisional

Probab=87.40  E-value=8.8  Score=32.32  Aligned_cols=79  Identities=10%  Similarity=0.126  Sum_probs=49.0

Q ss_pred             EEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc----hHH
Q 030139           64 VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT----GGT  139 (182)
Q Consensus        64 ~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT----G~T  139 (182)
                      .|++ -.+.-.+|..+|+.||+++..+..++...            |  +.+++....+.|++|+||-.....    =--
T Consensus         7 ~i~~-~~~~~~la~~ia~~lg~~l~~~~~~~Fpd------------G--E~~v~i~~~vrg~dV~iv~s~~~~~nd~lme   71 (320)
T PRK02269          7 KLFA-LSSNKELAEKVAQEIGIELGKSSVRQFSD------------G--EIQVNIEESIRGHHVFILQSTSSPVNDNLME   71 (320)
T ss_pred             EEEE-CCCCHHHHHHHHHHhCCceeeeEEEECCC------------C--CEEEEECCCCCCCEEEEEecCCCCccchHHH
Confidence            3444 34446899999999999876553332211            2  222222344789999999775431    123


Q ss_pred             HHHHHHHHHhcCCeEEEE
Q 030139          140 LSAAIRLLERVGVHVVEC  157 (182)
Q Consensus       140 l~~~~~~L~~~ga~~v~v  157 (182)
                      +.-+++.|+.+|++.+.+
T Consensus        72 lll~~~alr~~~a~~i~~   89 (320)
T PRK02269         72 ILIMVDALKRASAESINV   89 (320)
T ss_pred             HHHHHHHHHHhCCCeEEE
Confidence            556778889999987643

>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional

Probab=86.92  E-value=9.8  Score=31.78  Aligned_cols=74  Identities=16%  Similarity=0.148  Sum_probs=47.2

Q ss_pred             CCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchH---HHHHHHHH
Q 030139           70 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGG---TLSAAIRL  146 (182)
Q Consensus        70 ~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~---Tl~~~~~~  146 (182)
                      .+.-.+|..+|+.||+|+......+...            |+..+.+  ...++|++|+||-.....-.   -+.-+++.
T Consensus         9 ~~~~~la~~ia~~lg~~~~~~~~~~F~d------------GE~~v~i--~~~v~g~~V~ivqs~~~~n~~l~elll~~~a   74 (301)
T PRK07199          9 PGNEAAAGRLAAALGVEVGRIELHRFPD------------GESYVRL--DSPVAGRTVVLVCSLDRPDEKLLPLLFAAEA   74 (301)
T ss_pred             CCCHHHHHHHHHHhCCceeeeEEEECCC------------CCEEEEE--CCCCCCCEEEEECCCCCCcHHHHHHHHHHHH
Confidence            3446899999999999986553332211            2222222  34478999999988654222   24456677


Q ss_pred             HHhcCCeEEEE
Q 030139          147 LERVGVHVVEC  157 (182)
Q Consensus       147 L~~~ga~~v~v  157 (182)
                      |+++|++.+.+
T Consensus        75 lr~~~a~~i~~   85 (301)
T PRK07199         75 ARELGARRVGL   85 (301)
T ss_pred             HHHcCCCeEEE
Confidence            88999986554

>PRK01259 ribose-phosphate pyrophosphokinase; Provisional

Probab=85.98  E-value=10  Score=31.81  Aligned_cols=74  Identities=15%  Similarity=0.168  Sum_probs=46.1

Q ss_pred             CCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc-hH---HHHHHHH
Q 030139           70 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GG---TLSAAIR  145 (182)
Q Consensus        70 ~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT-G~---Tl~~~~~  145 (182)
                      .+.-.+|..+|+.||.+......++...            |  +.+++......|++|+||=..... -.   -+.-+++
T Consensus         7 ~~~~~la~~ia~~lg~~~~~~~~~~Fpd------------G--E~~vri~~~v~g~~V~ii~s~~~~~nd~l~eLll~~~   72 (309)
T PRK01259          7 NANPELAEKIAKYLGIPLGKASVGRFSD------------G--EISVEINENVRGKDVFIIQSTCAPTNDNLMELLIMID   72 (309)
T ss_pred             CCCHHHHHHHHHHhCCceeeeEEEECCC------------C--CEEEEeCCCCCCCEEEEECCCCCCCcHHHHHHHHHHH
Confidence            3446899999999999886543222111            2  222222344689999999765322 11   2456678


Q ss_pred             HHHhcCCeEEEE
Q 030139          146 LLERVGVHVVEC  157 (182)
Q Consensus       146 ~L~~~ga~~v~v  157 (182)
                      .+++.|++.+.+
T Consensus        73 alr~~ga~~i~l   84 (309)
T PRK01259         73 ALKRASAGRITA   84 (309)
T ss_pred             HHHHcCCceEEE
Confidence            888999986543

>PRK03092 ribose-phosphate pyrophosphokinase; Provisional

Probab=85.73  E-value=7.2  Score=32.60  Aligned_cols=69  Identities=14%  Similarity=0.180  Sum_probs=43.7

Q ss_pred             hHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc-hHH---HHHHHHHHHhc
Q 030139           75 FGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GGT---LSAAIRLLERV  150 (182)
Q Consensus        75 ~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT-G~T---l~~~~~~L~~~  150 (182)
                      +|..+|+.+|+++.....++...            |  +++++....++|++|+||--.... ...   +.-+++.+++.
T Consensus         1 la~~ia~~l~~~l~~~~~~~F~D------------G--E~~vri~~~v~g~~v~ii~s~~~p~nd~l~ell~~~~a~r~~   66 (304)
T PRK03092          1 LAEEVAKELGVEVTPTTAYDFAN------------G--EIYVRFEESVRGCDAFVLQSHTAPINKWLMEQLIMIDALKRA   66 (304)
T ss_pred             CHHHHHHHhCCceeeeEEEECCC------------C--CEEEEECCCCCCCEEEEEeCCCCCCcHHHHHHHHHHHHHHHc
Confidence            57889999999876553332211            1  223333344789999998875542 222   45677888999


Q ss_pred             CCeEEEE
Q 030139          151 GVHVVEC  157 (182)
Q Consensus       151 ga~~v~v  157 (182)
                      |++.+.+
T Consensus        67 ~a~~i~~   73 (304)
T PRK03092         67 SAKRITV   73 (304)
T ss_pred             CCCeEEE
Confidence            9986654

>PRK04923 ribose-phosphate pyrophosphokinase; Provisional

Probab=85.67  E-value=12  Score=31.56  Aligned_cols=79  Identities=13%  Similarity=0.151  Sum_probs=47.8

Q ss_pred             EEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCch----HH
Q 030139           64 VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATG----GT  139 (182)
Q Consensus        64 ~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG----~T  139 (182)
                      .|++- .+.-.+|..+|+.||+|+.....++...            |+  .+++......|++|+||=..-...    --
T Consensus         8 ~i~~g-~~~~~La~~ia~~lg~~l~~~~~~~Fpd------------GE--~~v~i~~~v~g~~V~iiqs~~~p~nd~lme   72 (319)
T PRK04923          8 LVFSG-NANKPLAQSICKELGVRMGKALVTRFSD------------GE--VQVEIEESVRRQEVFVIQPTCAPSAENLME   72 (319)
T ss_pred             EEEEC-CCCHHHHHHHHHHhCCceeeeEEEECCC------------CC--EEEEECCCcCCCeEEEEecCCCCCchHHHH
Confidence            34443 4456899999999999986553332211            22  222223446799999986643221    12


Q ss_pred             HHHHHHHHHhcCCeEEEE
Q 030139          140 LSAAIRLLERVGVHVVEC  157 (182)
Q Consensus       140 l~~~~~~L~~~ga~~v~v  157 (182)
                      +.-+++.++..|++.+.+
T Consensus        73 Ll~~~~alr~~~a~~i~~   90 (319)
T PRK04923         73 LLVLIDALKRASAASVTA   90 (319)
T ss_pred             HHHHHHHHHHcCCcEEEE
Confidence            445667788999986653

>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase

Probab=84.90  E-value=12  Score=31.36  Aligned_cols=74  Identities=14%  Similarity=0.169  Sum_probs=45.2

Q ss_pred             CCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEE-ecccC----chHHHHHHH
Q 030139           70 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIV-DDLVA----TGGTLSAAI  144 (182)
Q Consensus        70 ~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllV-DDvit----TG~Tl~~~~  144 (182)
                      .+.-.+|..+|+.+|.++.....++...            |  +.+++......|+.|+|| -....    .=--+.-++
T Consensus         7 ~~~~~la~~ia~~lg~~~~~~~~~~Fpd------------G--E~~v~i~~~v~g~~v~iv~~s~~~~~~~~l~el~~~~   72 (308)
T TIGR01251         7 SSNQELAQKVAKNLGLPLGDVEVKRFPD------------G--ELYVRINESVRGKDVFIIQQSTSAPVNDNLMELLIMI   72 (308)
T ss_pred             CCCHHHHHHHHHHhCCeeeeeEEEECCC------------C--CEEEEECCCCCCCeEEEEeCCCCCCccHHHHHHHHHH
Confidence            3446899999999999887654332211            2  122222334678999888 55431    112345567


Q ss_pred             HHHHhcCCeEEEE
Q 030139          145 RLLERVGVHVVEC  157 (182)
Q Consensus       145 ~~L~~~ga~~v~v  157 (182)
                      +.+++.|++.+.+
T Consensus        73 ~a~r~~ga~~i~~   85 (308)
T TIGR01251        73 DALKRASAKSITA   85 (308)
T ss_pred             HHHHHcCCCeEEE
Confidence            7888999986543

In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.

>PRK02458 ribose-phosphate pyrophosphokinase; Provisional

Probab=83.82  E-value=19  Score=30.44  Aligned_cols=80  Identities=14%  Similarity=0.134  Sum_probs=47.7

Q ss_pred             EEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc-hHH---
Q 030139           64 VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GGT---  139 (182)
Q Consensus        64 ~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT-G~T---  139 (182)
                      +++-.-.+.-.+|..+|+.+|++...+..++...            |  +.+++....+.|+.|+||-..... -..   
T Consensus        10 ~~i~~~~~~~~la~~ia~~lg~~l~~~~~~~Fpd------------G--E~~v~i~~~v~g~dV~ii~s~~~~~nd~l~e   75 (323)
T PRK02458         10 IKLFSLNSNLEIAEKIAQAAGVPLGKLSSRQFSD------------G--EIMINIEESVRGDDIYIIQSTSFPVNDHLWE   75 (323)
T ss_pred             eEEEECCCCHHHHHHHHHHhCCceeeeEEEECCC------------C--CEEEEecCCcCCCeEEEEecCCCCCchHHHH
Confidence            3333345557899999999999886543222211            2  122222334688999998765322 122   


Q ss_pred             HHHHHHHHHhcCCeEEEE
Q 030139          140 LSAAIRLLERVGVHVVEC  157 (182)
Q Consensus       140 l~~~~~~L~~~ga~~v~v  157 (182)
                      +..+++.+++.|++.+.+
T Consensus        76 Lll~~~alr~~~a~~i~l   93 (323)
T PRK02458         76 LLIMIDACKRASANTVNV   93 (323)
T ss_pred             HHHHHHHHHHcCCceEEE
Confidence            344567778999976543

>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]

Probab=82.15  E-value=8.6  Score=32.39  Aligned_cols=75  Identities=12%  Similarity=0.137  Sum_probs=48.6

Q ss_pred             CCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchH----HHHHHHH
Q 030139           70 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGG----TLSAAIR  145 (182)
Q Consensus        70 ~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~----Tl~~~~~  145 (182)
                      .+.-.+|..+|+.||+|+..+..++...              +++++.-...++|++|.|+...-....    -+.-+++
T Consensus        11 ~s~~~La~~ia~~l~~~l~~~~~~rF~D--------------GE~~V~i~EsVrg~dVfI~qs~~~pvnd~lmELLi~id   76 (314)
T COG0462          11 SSNPELAEKIAKRLGIPLGKVEVKRFPD--------------GEIYVRIEESVRGKDVFIIQSTSPPVNDNLMELLIMID   76 (314)
T ss_pred             CCCHHHHHHHHHHhCCCcccceeEEcCC--------------CcEEEEecccccCCeEEEEeCCCCCcCHHHHHHHHHHH
Confidence            4445899999999999987654332211              222333345588999997766554222    2345678


Q ss_pred             HHHhcCCeEEEEE
Q 030139          146 LLERVGVHVVECA  158 (182)
Q Consensus       146 ~L~~~ga~~v~v~  158 (182)
                      +++.++|+.|.++
T Consensus        77 A~k~asA~~It~V   89 (314)
T COG0462          77 ALKRASAKRITAV   89 (314)
T ss_pred             HHHhcCCceEEEE
Confidence            8899999977654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	182
2dy0_A	190	Crystal Structure Of Project Jw0458 From Escherichi		5e-47
1ore_A	180	Human Adenine Phosphoribosyltransferase Length = 18		5e-37
1g2q_A	187	Crystal Structure Of Adenine Phosphoribosyltransfer		2e-28
1l1q_A	186	Crystal Structure Of Aprtase From Giardia Lamblia C		1e-24
1mzv_A	235	Crystal Structure Of Adenine Phosphoribosyltransfer		2e-19
1qb7_A	236	Crystal Structures Of Adenine Phosphoribosyltransfe		2e-17
1o57_A	291	Crystal Structure Of The Purine Operon Repressor Of		1e-04
1p4a_A	285	Crystal Structure Of The Purr Complexed With Cprpp		1e-04

>pdb|2DY0|A Chain A, Crystal Structure Of Project Jw0458 From Escherichia Coli Length = 190

Iteration: 1
 Score =  183 bits (464), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 86/171 (50%), Positives = 124/171 (72%)
Query: 2   ASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN 61
            S+ + A   ++  + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  
Sbjct: 4   GSSGMTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAG 63
Query: 62  ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAV 121
           I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A+
Sbjct: 64  ITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAI 123
Query: 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 172
           + G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct: 124 KPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 174

>pdb|1ORE|A Chain A, Human Adenine Phosphoribosyltransferase Length = 180

Iteration: 1
 Score =  150 bits (378), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 110/176 (62%), Gaps = 3/176 (1%)
Query: 10  DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN---ISVVA 66
           D  +  +   IR  PDFP PG++F+DI+ +L D  +FR  I L     K  +   I  +A
Sbjct: 3   DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIA 62
Query: 67  GIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGER 126
           G+++RGF+FGP +A  +G   V +RK  KLPG  +   YSLEYGK  +E+   A++ G+R
Sbjct: 63  GLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQR 122
Query: 127 ALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 182
            ++VDDL+ATGGT++AA  LL R+   V+EC  ++EL  LKGRE+L   P F L+ 
Sbjct: 123 VVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQ 178

>pdb|1G2Q|A Chain A, Crystal Structure Of Adenine Phosphoribosyltransferase Length = 187

Iteration: 1
 Score =  121 bits (303), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 104/168 (61%), Gaps = 5/168 (2%)
Query: 19  AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFV----ERYKDKNISVVAGIEARGFI 74
           A+   P+FP  GI+F+D   +  +   F+  ID F     E + +  I  + G+E+RGF+
Sbjct: 13  ALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFL 72
Query: 75  FGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLV 134
           FGP +ALA+G  FVP+RK  KLPGE     Y  EYG D+ E+   A+ AG   +IVDD++
Sbjct: 73  FGPTLALALGVGFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDII 132
Query: 135 ATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 182
           ATGG+ +AA  L+E++  +++E   V+EL  LKGR +L   P+F L++
Sbjct: 133 ATGGSAAAAGELVEQLEANLLEYNFVMELDFLKGRSKLN-APVFTLLN 179

>pdb|1L1Q|A Chain A, Crystal Structure Of Aprtase From Giardia Lamblia Complexed With 9- Deazaadenine Length = 186

Iteration: 1
 Score =  108 bits (271), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 95/166 (57%), Gaps = 3/166 (1%)
Query: 13  IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARG 72
           +A   + I+ IPDFP  GI F+D++ +L    A           YKD  I+ V GIE+RG
Sbjct: 5   VADAHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRG 64
Query: 73  FIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDV-MEMHVGAVQAGERALIVD 131
           FI G  +A ++G  FV +RK  KLPG+V    + +EY K V +E+    +   +  L+ D
Sbjct: 65  FILGGIVANSLGVGFVALRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHD 124
Query: 132 DLVATGGTLSAAIRLLERVGV--HVVECACVIELPELKGRERLGEK 175
           D++ATGGTL AAI L E  GV    +    + E+  LKGRE++G+K
Sbjct: 125 DVLATGGTLLAAIELCETAGVKPENIYINVLYEIEALKGREKVGQK 170

>pdb|1MZV|A Chain A, Crystal Structure Of Adenine Phosphoribosyltransferase (Aprt) From Leishmania Tarentolae Length = 235

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 86/146 (58%), Gaps = 6/146 (4%)
Query: 33  FQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPM 90
           F D++++    +  +   D  VERY+  +   + + G +ARGF+FGP IA+ +G  FV M
Sbjct: 42  FADVSSITESPETLKAIRDFLVERYRTMSPAPTHILGFDARGFLFGPMIAVELGIPFVLM 101
Query: 91  RKPKKLPGEVI-SEEYSLEYGK---DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRL 146
           RK  K  G +I SE Y  EY +   +VM +  G++    R +++DD++ATGGT  + ++L
Sbjct: 102 RKADKNAGLLIRSEPYEKEYKEAAPEVMTIRHGSIGKNSRVVLIDDVLATGGTALSGLQL 161
Query: 147 LERVGVHVVECACVIELPELKGRERL 172
           +E  G  VVE   ++ +P LK  ER+
Sbjct: 162 VEASGAEVVEMVSILTIPFLKAAERI 187

>pdb|1QB7|A Chain A, Crystal Structures Of Adenine Phosphoribosyltransferase From Leishmania Donovani. Length = 236

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 85/146 (58%), Gaps = 6/146 (4%)
Query: 33  FQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPM 90
           F D++++    +  +   D  V+RY+  +   + + G +ARGF+FGP IA+ +   FV M
Sbjct: 41  FADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELEIPFVLM 100
Query: 91  RKPKKLPGEVI-SEEYSLEYGK---DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRL 146
           RK  K  G +I SE Y  EY +   +VM +  G++  G R +++DD++ATGGT  + ++L
Sbjct: 101 RKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQL 160
Query: 147 LERVGVHVVECACVIELPELKGRERL 172
           +E     VVE   ++ +P LK  E++
Sbjct: 161 VEASDAVVVEMVSILSIPFLKAAEKI 186

>pdb|1O57|A Chain A, Crystal Structure Of The Purine Operon Repressor Of Bacillus Subtilis Length = 291

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Query: 52  LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP-GEVISEEYSLEYG 110
           LF   + ++ I VV  +  +G       A  +    V +RK  K+  G  +S  Y     
Sbjct: 121 LFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKDNKVTEGSTVSINYVSGSS 180
Query: 111 KDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIE 162
             +  M +   +++ G   LI+DD +  GGT++  I LL+    +V     ++E
Sbjct: 181 NRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVE 234

>pdb|1P4A|A Chain A, Crystal Structure Of The Purr Complexed With Cprpp Length = 285

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Query: 52  LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP-GEVISEEYSLEYG 110
           LF   + ++ I VV  +  +G       A  +    V +RK  K+  G  +S  Y     
Sbjct: 121 LFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKDNKVTEGSTVSINYVSGSS 180
Query: 111 KDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIE 162
             +  M +   +++ G   LI+DD +  GGT++  I LL+    +V     ++E
Sbjct: 181 NRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVE 234

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	182
2dy0_A	190	APRT, adenine phosphoribosyltransferase; structura	9e-99
1zn8_A	180	APRT, adenine phosphoribosyltransferase; glycosylt	3e-97
1g2q_A	187	Adenine phosphoribosyltransferase 1; dimer, single	2e-93
1l1q_A	186	Adenine phosphoribosyltransferase; aprtase, giardi	3e-91
1qb7_A	236	APRT, adenine phosphoribosyltransferase; dinucleot	5e-85
1o57_A	291	PUR operon repressor; purine operon repressor, hel	6e-63
1y0b_A	197	Xanthine phosphoribosyltransferase; purine metabol	6e-54
1vch_A	175	Phosphoribosyltransferase-related protein; structu	1e-38
2p1z_A	180	Phosphoribosyltransferase; STRU genomics, PSI-2, p	1e-10
3qw4_B	453	UMP synthase; N-terminal orotidine monophosphate d	4e-10
3m3h_A	234	OPRT, oprtase, orotate phosphoribosyltransferase;	2e-09
2aee_A	211	OPRT, oprtase, orotate phosphoribosyltransferase;	3e-09
2wns_A	205	Orotate phosphoribosyltransferase; alternative spl	4e-09
3dez_A	243	OPRT, oprtase, orotate phosphoribosyltransferase;	4e-09
2yzk_A	178	OPRT, oprtase, orotate phosphoribosyltransferase;	1e-06
1vdm_A	153	Purine phosphoribosyltransferase; structural genom	3e-06
2xbu_A	221	Hypoxanthine-guanine phosphoribosyltransferase; gl	5e-06
2ps1_A	226	Orotate phosphoribosyltransferase 1; alpha beta, o	1e-05
3mjd_A	232	Orotate phosphoribosyltransferase; IDP02311, csgid	2e-05
3n2l_A	238	OPRT, oprtase, orotate phosphoribosyltransferase;	3e-04
1lh0_A	213	OMP synthase; loop closure, monomer closure, orota	3e-04
1dku_A	317	Protein (phosphoribosyl pyrophosphate synthetase);	8e-04

>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12} Length = 190

 Score =  282 bits (724), Expect = 9e-99
 Identities = 87/177 (49%), Positives = 126/177 (71%), Gaps = 2/177 (1%)

Query: 8   AQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAG 67
           A   ++  + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G
Sbjct: 10  ATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVG 69

Query: 68  IEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERA 127
            EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ 
Sbjct: 70  TEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKV 129

Query: 128 LIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK--PLFVLVS 182
           L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL ++    + LV 
Sbjct: 130 LVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSYSLVP 186

>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A* Length = 180

 Score =  278 bits (713), Expect = 3e-97
 Identities = 76/176 (43%), Positives = 110/176 (62%), Gaps = 3/176 (1%)

Query: 10  DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN---ISVVA 66
           D  +  +   IR  PDFP PG++F+DI+ +L D  +FR  I L     K  +   I  +A
Sbjct: 3   DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIA 62

Query: 67  GIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGER 126
           G+++RGF+FGP +A  +G   V +RK  KLPG  +   YSLEYGK  +E+   A++ G+R
Sbjct: 63  GLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQR 122

Query: 127 ALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 182
            ++VDDL+ATGGT++AA  LL R+   V+EC  ++EL  LKGRE+L   P F L+ 
Sbjct: 123 VVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQ 178

>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A Length = 187

 Score =  268 bits (688), Expect = 2e-93
 Identities = 69/171 (40%), Positives = 105/171 (61%), Gaps = 5/171 (2%)

Query: 16  ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFV----ERYKDKNISVVAGIEAR 71
           +  A+   P+FP  GI+F+D   +  +   F+  ID F     E + +  I  + G+E+R
Sbjct: 10  LKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESR 69

Query: 72  GFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVD 131
           GF+FGP +ALA+G  FVP+RK  KLPGE     Y  EYG D+ E+   A+ AG   +IVD
Sbjct: 70  GFLFGPTLALALGVGFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVD 129

Query: 132 DLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 182
           D++ATGG+ +AA  L+E++  +++E   V+EL  LKGR +L   P+F L++
Sbjct: 130 DIIATGGSAAAAGELVEQLEANLLEYNFVMELDFLKGRSKLN-APVFTLLN 179

>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A* Length = 186

 Score =  263 bits (674), Expect = 3e-91
 Identities = 66/172 (38%), Positives = 96/172 (55%), Gaps = 5/172 (2%)

Query: 16  ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIF 75
             + I+ IPDFP  GI F+D++ +L    A           YKD  I+ V GIE+RGFI 
Sbjct: 8   AHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFIL 67

Query: 76  GPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDV-MEMHVGAVQAGERALIVDDLV 134
           G  +A ++G  FV +RK  KLPG+V    + +EY K V +E+    +   +  L+ DD++
Sbjct: 68  GGIVANSLGVGFVALRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVL 127

Query: 135 ATGGTLSAAIRLLERVG--VHVVECACVIELPELKGRERLGEK--PLFVLVS 182
           ATGGTL AAI L E  G     +    + E+  LKGRE++G+K   LF ++ 
Sbjct: 128 ATGGTLLAAIELCETAGVKPENIYINVLYEIEALKGREKVGQKCTRLFSVIR 179

>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A* Length = 236

 Score =  249 bits (637), Expect = 5e-85
 Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 9/175 (5%)

Query: 17  SSAIRVIPDF-PKPGIMFQDITTLLLDTKAFRDTIDLFVERYK--DKNISVVAGIEARGF 73
            S     P F P+    F D++++    +  +   D  V+RY+      + + G +ARGF
Sbjct: 24  KSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGF 83

Query: 74  IFGPPIALAIGAKFVPMRKPKKLPGEVI-SEEYSLEYGK---DVMEMHVGAVQAGERALI 129
           +FGP IA+ +   FV MRK  K  G +I SE Y  EY +   +VM +  G++  G R ++
Sbjct: 84  LFGPMIAVELEIPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVL 143

Query: 130 VDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK--PLFVLVS 182
           +DD++ATGGT  + ++L+E     VVE   ++ +P LK  E++       +  + 
Sbjct: 144 IDDVLATGGTALSGLQLVEASDAVVVEMVSILSIPFLKAAEKIHSTANSRYKDIK 198

>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A* Length = 291

 Score =  195 bits (497), Expect = 6e-63
 Identities = 36/161 (22%), Positives = 62/161 (38%), Gaps = 4/161 (2%)

Query: 24  PDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAI 83
           P+   PG  +  +T +L           LF   + ++ I VV  +  +G       A  +
Sbjct: 94  PERILPGG-YVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYL 152

Query: 84  GAKFVPMRKPKKLP-GEVISEEYSLEYGK--DVMEMHVGAVQAGERALIVDDLVATGGTL 140
               V +RK  K+  G  +S  Y          M +   +++ G   LI+DD +  GGT+
Sbjct: 153 NVPVVIVRKDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTI 212

Query: 141 SAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 181
           +  I LL+    +V     ++E   +  R       L  L 
Sbjct: 213 NGMINLLDEFNANVAGIGVLVEAEGVDERLVDEYMSLLTLS 253

>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A* Length = 197

 Score =  169 bits (429), Expect = 6e-54
 Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 11/162 (6%)

Query: 25  DFPKPGIMFQDITTLL-------LDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGP 77
              + G++  D    +       +D    +   D F  R+    I+ +  IE+ G     
Sbjct: 10  KIEEEGVVLSDQVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAV 69

Query: 78  PIALAIGAKFVPMRKPKKLPGE----VISEEYSLEYGKDVMEMHVGAVQAGERALIVDDL 133
              L +G   V  RK K L         S     +  +  + +    +   +  LI+DD 
Sbjct: 70  MTGLKLGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDF 129

Query: 134 VATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 175
           +A G      + ++++ G  +     VIE     GR+ L + 
Sbjct: 130 LANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKL 171

>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1 Length = 175

 Score =  129 bits (325), Expect = 1e-38
 Identities = 33/169 (19%), Positives = 63/169 (37%), Gaps = 7/169 (4%)

Query: 16  ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIF 75
           +    R +P           +   L D +  R   +        K   ++   E      
Sbjct: 8   VGGVTRHVPLIEPLPGRRIPLVEFLGDPEFTRAAAEALRPLV-PKEAEILFTTETSPIPL 66

Query: 76  GPPIALAIGAKFVPMRKPKKLPGE--VISEEYSLEYGKD---VMEMHVGAVQAGERALIV 130
              +A A+G  +V  R+ ++   E  +I E  +L  G      ++         +R ++V
Sbjct: 67  THVLAEALGLPYVVARRRRRPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLV 126

Query: 131 DDLVATGGTLSAAIRLLERVGVHVVECACVI-ELPELKGRERLGEKPLF 178
            D+VA+G T+ A  +++ R G HVV    V  +       + + E P+ 
Sbjct: 127 SDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTPGLAVDTVAELPVL 175

>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae} Length = 180

 Score = 56.9 bits (138), Expect = 1e-10
 Identities = 29/144 (20%), Positives = 51/144 (35%), Gaps = 19/144 (13%)

Query: 35  DITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM---R 91
           D+    L  +A R   +L  E   D +   V G+          +  A G + +     R
Sbjct: 37  DLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADG-REIHAFVVR 95

Query: 92  KPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG 151
           K  K            ++G        G    G++ L+V+D   TG +   A++ L   G
Sbjct: 96  KEAK------------KHGM--QRRIEGPDVVGKKVLVVEDTTTTGNSPLTAVKALREAG 141

Query: 152 VHVVECACVIELPELKGRERLGEK 175
             VV  A V++       + +  +
Sbjct: 142 AEVVGVATVVDR-ATGAADVIAAE 164

>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani} Length = 453

 Score = 56.7 bits (137), Expect = 4e-10
 Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 17/133 (12%)

Query: 44  KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISE 103
              R     + +  +      +AG+          I+  +    +  R+  K        
Sbjct: 299 AIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNVPLIYPRREAK-------- 350

Query: 104 EYSLEYG-KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIE 162
                YG K  +E   G  + G+R +I+DDLV+TG T   AI  L   G+ VV    +++
Sbjct: 351 ----IYGTKAAIE---GEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVD 403

Query: 163 LPELKGRERLGEK 175
             ++  +  L + 
Sbjct: 404 -RDMGAKAFLNKL 415

>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A* Length = 234

 Score = 54.0 bits (130), Expect = 2e-09
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 24/147 (16%)

Query: 35  DITTLLLDTKAFRDTIDLFVERYKDKNISV--VAGIEARGFIFGPPIALAIGAKF-VPM- 90
           D    L   K  +       E  K+   +V  +AG    G       A  +  +  +PM 
Sbjct: 60  DNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAG----IAHAAWVSDRMDLPMC 115

Query: 91  --RKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLE 148
             R   K             +GK       G  + G++ ++V+DL++TGG+    +  L 
Sbjct: 116 YVRSKAK------------GHGKGNQI--EGKAEKGQKVVVVEDLISTGGSAITCVEALR 161

Query: 149 RVGVHVVECACVIELPELKGRERLGEK 175
             G  V+    +       G+E+L   
Sbjct: 162 EAGCEVLGIVSIFTYELEAGKEKLEAA 188

>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1 Length = 211

 Score = 53.2 bits (128), Expect = 3e-09
 Identities = 33/143 (23%), Positives = 51/143 (35%), Gaps = 16/143 (11%)

Query: 35  DITTLLLDTKAFRDTIDLFVERYKDKNIS--VVAGIEARGFIFGPPIALAIGAKFVPMRK 92
           D    L   K      + FVE  K       V+AG    G   G  IA  +   F  +R 
Sbjct: 40  DNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRS 99

Query: 93  PKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGV 152
             K            ++G        G V  G++ +I++DL++TGG++  A     R G 
Sbjct: 100 KPK------------DHGAGNQI--EGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGA 145

Query: 153 HVVECACVIELPELKGRERLGEK 175
            V+    +      K  +   E 
Sbjct: 146 DVLGVVAIFTYELPKASQNFKEA 168

>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens} Length = 205

 Score = 53.1 bits (128), Expect = 4e-09
 Identities = 25/142 (17%), Positives = 56/142 (39%), Gaps = 17/142 (11%)

Query: 35  DITTLLLDTKAFRDTIDLFVERYKDKNIS--VVAGIEARGFIFGPPIALAIGAKFVPMRK 92
           D+  ++   +      D+  +  ++  IS   V G+          I        +  RK
Sbjct: 34  DLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRK 93

Query: 93  PKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGV 152
             K  G            + V     G +  GE  LI++D+V +G ++   + +L++ G+
Sbjct: 94  ETKDYGT----------KRLV----EGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGL 139

Query: 153 HVVECACVIELPELKGRERLGE 174
            V +   +++  +  G+++L  
Sbjct: 140 KVTDAIVLLDREQ-GGKDKLQA 160

>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans} Length = 243

 Score = 52.9 bits (127), Expect = 4e-09
 Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 26/148 (17%)

Query: 35  DITTLLLDTKAFRDTIDLFVERYKDKNIS--VVAGIEARGFIFGPPIALAIGAKF-VPM- 90
           D    L   +      + FVE  K+      V+AG        G P    I  K  +P+ 
Sbjct: 72  DNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTA----TAGIPHGAIIADKMNLPLA 127

Query: 91  --RKPKKLPGEVISEEYSLEYG-KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLL 147
             R   K            ++G  + +E   G V  G++ +I++DL++TGG++  A+   
Sbjct: 128 YIRSKPK------------DHGAGNQIE---GRVTKGQKMVIIEDLISTGGSVLDAVAAA 172

Query: 148 ERVGVHVVECACVIELPELKGRERLGEK 175
           +R G  V+    +      K      + 
Sbjct: 173 QREGADVLGVVAIFTYELPKATANFEKA 200

>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix} Length = 178

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 18/143 (12%)

Query: 35  DITTLLLDTKAFRDTIDLFVERYKDKNIS--VVAGIEARGFIFGPPIALAIGAKFVPMRK 92
           D+  LL D  ++   +DL +E           V G+   G  +   +AL +      +R 
Sbjct: 30  DMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLALRLSKPLGYVRP 89

Query: 93  PKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGV 152
            +K             +G   +    G    G R ++VDD+  TG +++ +I +L   G 
Sbjct: 90  ERK------------GHGT--LSQVEGDPPKG-RVVVVDDVATTGTSIAKSIEVLRSNGY 134

Query: 153 HVVECACVIELPELKGRERLGEK 175
            V     +++  E    E L   
Sbjct: 135 TVGTALVLVDRGE-GAGELLARM 156

>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1 Length = 153

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 16/56 (28%), Positives = 29/56 (51%)

Query: 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165
            K V+ + +      +R +IVDD+  TG TL   I  ++++G   ++ AC+   P 
Sbjct: 69  EKPVITIPIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPW 124

>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A* Length = 221

 Score = 44.0 bits (103), Expect = 5e-06
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 55  ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVM 114
           ER K+    ++  I   GFI    +   +    VP  +   +   +  +  S+    + +
Sbjct: 23  ERIKNFKPDLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNSVGSEVEEV 82

Query: 115 EMHVGAVQA-----------GERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIEL 163
            + V   Q            G+  LIVD++  T  TL  A+  LE+      +   +   
Sbjct: 83  GVKVSRTQWIDYEQCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTE 142

Query: 164 P 164
            
Sbjct: 143 K 143

>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A* Length = 226

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 16/104 (15%), Positives = 40/104 (38%), Gaps = 5/104 (4%)

Query: 58  KDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMH 117
            D    V+ G   +G      + + +        +  +      + + + ++G+    + 
Sbjct: 64  SDLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQY---AFNRKEAKDHGE--GGII 118

Query: 118 VGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI 161
           VG+    +R LI+DD++  G  ++ A  ++      VV     +
Sbjct: 119 VGSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIAL 162

>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis} Length = 232

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 18/93 (19%), Positives = 39/93 (41%), Gaps = 9/93 (9%)

Query: 74  IFGP-----PIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERAL 128
           +FGP     P+  AI      ++    +P     +E + ++G+    + VGA    ++ L
Sbjct: 85  LFGPAYKGIPLVAAISTVL-ALKYNIDMPYAFDRKE-AKDHGE--GGVFVGADMTNKKVL 140

Query: 129 IVDDLVATGGTLSAAIRLLERVGVHVVECACVI 161
           ++DD++  G     +   L+ +   +      I
Sbjct: 141 LIDDVMTAGTAFYESYNKLKIINAKIAGVVLSI 173

>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae} Length = 238

 Score = 39.1 bits (91), Expect = 3e-04
 Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 10/115 (8%)

Query: 58  KDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMH 117
                 V+ G   +G       A+A+             P     +E +  +G      +
Sbjct: 85  SGIEFDVLFGPAYKGIPIATTTAVALADHH-----DVDTPYCFNRKE-AKNHG---EGGN 135

Query: 118 VGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 172
           +   +   R ++VDD++  G  +  ++ L++     +      I+  E KG+  L
Sbjct: 136 LVGSKLEGRVMLVDDVITAGTAIRESMELIQANKADLAGVLVAIDRQE-KGKGEL 189

>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A Length = 213

 Score = 39.0 bits (91), Expect = 3e-04
 Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 12/125 (9%)

Query: 50  IDLFVERYKDKNIS--VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSL 107
              + E   D  I   ++ G   +G       A+A+          K LP     +E   
Sbjct: 50  GRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHH-----DKDLPYCFNRKEA-K 103

Query: 108 EYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELK 167
           ++G       VG+   G R ++VDD++  G  +  ++ +++  G  +      ++  E +
Sbjct: 104 DHG--EGGSLVGSALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQE-R 159

Query: 168 GRERL 172
           GR  +
Sbjct: 160 GRGEI 164

>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A* Length = 317

 Score = 37.9 bits (89), Expect = 8e-04
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)

Query: 113 VMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECAC 159
           VM + VG ++ G+ A+++DD++ T GT++ A   L   G   V   C
Sbjct: 208 VMNI-VGNIE-GKTAILIDDIIDTAGTITLAANALVENGAKEVYACC 252

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	182
1g2q_A	187	Adenine phosphoribosyltransferase 1; dimer, single	100.0
2dy0_A	190	APRT, adenine phosphoribosyltransferase; structura	100.0
1zn8_A	180	APRT, adenine phosphoribosyltransferase; glycosylt	100.0
1l1q_A	186	Adenine phosphoribosyltransferase; aprtase, giardi	100.0
1qb7_A	236	APRT, adenine phosphoribosyltransferase; dinucleot	100.0
3m3h_A	234	OPRT, oprtase, orotate phosphoribosyltransferase;	99.93
1y0b_A	197	Xanthine phosphoribosyltransferase; purine metabol	99.93
1vch_A	175	Phosphoribosyltransferase-related protein; structu	99.92
1o57_A	291	PUR operon repressor; purine operon repressor, hel	99.92
3dez_A	243	OPRT, oprtase, orotate phosphoribosyltransferase;	99.92
2p1z_A	180	Phosphoribosyltransferase; STRU genomics, PSI-2, p	99.91
2yzk_A	178	OPRT, oprtase, orotate phosphoribosyltransferase;	99.91
2wns_A	205	Orotate phosphoribosyltransferase; alternative spl	99.91
3mjd_A	232	Orotate phosphoribosyltransferase; IDP02311, csgid	99.9
1lh0_A	213	OMP synthase; loop closure, monomer closure, orota	99.9
3qw4_B	453	UMP synthase; N-terminal orotidine monophosphate d	99.9
2aee_A	211	OPRT, oprtase, orotate phosphoribosyltransferase;	99.89
3n2l_A	238	OPRT, oprtase, orotate phosphoribosyltransferase;	99.89
2ps1_A	226	Orotate phosphoribosyltransferase 1; alpha beta, o	99.89
3hvu_A	204	Hypoxanthine phosphoribosyltransferase; hypoxanthi	99.83
1vdm_A	153	Purine phosphoribosyltransferase; structural genom	99.81
1fsg_A	233	HGPRTASE, hypoxanthine-guanine phosphoribosyltrans	99.79
1hgx_A	183	HGXPRTASE, hypoxanthine-guanine-xanthine phosphori	99.78
3lrt_A	286	Ribose-phosphate pyrophosphokinase; phosphoribosyl	99.77
1z7g_A	217	HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribos	99.77
3ozf_A	250	Hypoxanthine-guanine-xanthine phosphoribosyltrans;	99.76
2jbh_A	225	Phosphoribosyltransferase domain-containing prote;	99.76
2geb_A	185	Hypoxanthine-guanine phosphoribosyltransferase; HG	99.75
3o7m_A	186	Hypoxanthine phosphoribosyltransferase; hypoxanthi	99.75
1pzm_A	211	HGPRT, hypoxanthine-guanine phosphoribosyltransfer	99.75
1tc1_A	220	Protein (hypoxanthine phosphoribosyltransferase);	99.74
1yfz_A	205	Hypoxanthine-guanine phosphoribosyltransferase; pr	99.73
1u9y_A	284	RPPK;, ribose-phosphate pyrophosphokinase; PRPP sy	99.73
1a3c_A	181	PYRR, pyrimidine operon regulatory protein PYRR; t	99.72
2ywu_A	181	Hypoxanthine-guanine phosphoribosyltransferase; ro	99.72
3ohp_A	177	Hypoxanthine phosphoribosyltransferase; structural	99.71
3s5j_B	326	Ribose-phosphate pyrophosphokinase 1; nucleotide s	99.71
1nul_A	152	XPRT, xanthine-guanine phosphoribosyltransferase;	99.7
1ufr_A	181	TT1027, PYR mRNA-binding attenuation protein; pyri	99.69
1wd5_A	208	Hypothetical protein TT1426; structural genomics,	99.69
3dah_A	319	Ribose-phosphate pyrophosphokinase; pyrophosphoki	99.68
1dku_A	317	Protein (phosphoribosyl pyrophosphate synthetase);	99.66
2ji4_A	379	Phosphoribosyl pyrophosphate synthetase-associated	99.66
2xbu_A	221	Hypoxanthine-guanine phosphoribosyltransferase; gl	99.65
1w30_A	201	PYRR bifunctional protein; transferase, glycosyltr	99.64
3acd_A	181	Hypoxanthine-guanine phosphoribosyltransferase; ro	99.61
1ecf_A	504	Glutamine phosphoribosylpyrophosphate amidotransf;	99.54
1ao0_A	459	Glutamine phosphoribosylpyrophosphate amidotransfe	99.47
1dqn_A	230	Guanine phosphoribosyltransferase; protein-inhibit	99.46
1i5e_A	209	Uracil phosphoribosyltransferase; salvage pathway;	99.16
1o5o_A	221	Uracil phosphoribosyltransferase; TM0721, structur	99.11
2e55_A	208	Uracil phosphoribosyltransferase; structural genom	99.0
2ehj_A	208	Uracil phosphoribosyltransferase; structural genom	99.0
1v9s_A	208	Uracil phosphoribosyltransferase; pyrimidine salva	98.91
1bd3_D	243	Uprtase, uracil phosphoribosyltransferase; glycosy	98.87
3dmp_A	217	Uracil phosphoribosyltransferase; structural genom	98.69
1xtt_A	216	Probable uracil phosphoribosyltransferase; tetrame	98.5
3dah_A	319	Ribose-phosphate pyrophosphokinase; pyrophosphoki	87.42
1u9y_A	284	RPPK;, ribose-phosphate pyrophosphokinase; PRPP sy	84.98
3s5j_B	326	Ribose-phosphate pyrophosphokinase 1; nucleotide s	84.03

>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A

Probab=100.00  E-value=1.6e-32  Score=212.17  Aligned_cols=172  Identities=40%  Similarity=0.749  Sum_probs=150.4

Q ss_pred             chHHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC----CCccEEEeeCCCChhhHHHHHHHhCC
Q 030139           10 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIGA   85 (182)
Q Consensus        10 ~~~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~----~~~d~Iv~v~~~G~~~a~~la~~l~v   85 (182)
                      .+.++.|++.+|..|+||.||+.|+|+..++.+++.++.+++.|++.+.+    .++|+|+|++.||+++|..+|+.+++
T Consensus         4 ~~~~~~l~~~~~~~~~~p~~g~~~~d~~~~l~~~~~~~~~~~~La~~i~~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~   83 (187)
T 1g2q_A            4 ASYAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGV   83 (187)
T ss_dssp             HHHHHHHHHHCEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTC
T ss_pred             hHHHHHHHHhcccCCCCCCCCEEEEehHhhhcCHHHHHHHHHHHHHHHhhhcccCCCCEEEEEccCcHHHHHHHHHHHCC
Confidence            35678899999999999999999999999999999999999999998875    46899999999999999999999999


Q ss_pred             CeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139           86 KFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus        86 p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      |+..+||.++.++...+..++.+++.+.+.+..+...+|++||||||++|||+|+.++++.|+++|++++++++++++.+
T Consensus        84 p~~~~rk~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~  163 (187)
T 1g2q_A           84 GFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDF  163 (187)
T ss_dssp             EEEEEEETTCSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCC
T ss_pred             CEEEEEEeCCCCcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEEEEccC
Confidence            99888887665655555555545555667766555578999999999999999999999999999999999999999987


Q ss_pred             cccccccCCCCcccccC
Q 030139          166 LKGRERLGEKPLFVLVS  182 (182)
Q Consensus       166 ~~~~~~l~~~~~~~l~~  182 (182)
                      .+|++++ ++|++||++
T Consensus       164 ~~g~~~l-~~~~~sl~~  179 (187)
T 1g2q_A          164 LKGRSKL-NAPVFTLLN  179 (187)
T ss_dssp             SSCCCCC-SSCEEECC-
T ss_pred             cCchhhc-CccEEEEEE
Confidence            7788888 899999874

>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}

Probab=100.00  E-value=2.4e-32  Score=211.70  Aligned_cols=170  Identities=51%  Similarity=0.916  Sum_probs=149.5

Q ss_pred             HHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeee
Q 030139           12 RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR   91 (182)
Q Consensus        12 ~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~r   91 (182)
                      .++.|.+.+|..|+||.+|+.|+|+..++.+++.++.+++.|++.+.+.++|+|+|+|.+||++|..+|+.+++|+...|
T Consensus        14 ~~~~l~~~i~~~p~~~~~g~~~~d~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~~r   93 (190)
T 2dy0_A           14 QLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVR   93 (190)
T ss_dssp             HHHHHHHHSEEETTCSSTTCCEEETHHHHHCHHHHHHHHHHHHHHHTTTTCCEEEEETTHHHHHHHHHHHHHTCEEEEEB
T ss_pred             HHHHHHHHHhhCCCCCCCCeEEEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEECcccHHHHHHHHHHHCCCEEEEE
Confidence            57789999999999999999999999999999999999999999997767899999999999999999999999998888


Q ss_pred             ccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccc
Q 030139           92 KPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER  171 (182)
Q Consensus        92 k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~  171 (182)
                      |+++.++...+..++.+++.+.+.+..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++.+.+++++
T Consensus        94 k~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~  173 (190)
T 2dy0_A           94 KPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQR  173 (190)
T ss_dssp             STTCCCSCEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHH
T ss_pred             ecCCCCcccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCcchHHH
Confidence            87766665555555545555567665445578999999999999999999999999999999999999999987778999


Q ss_pred             cC--CCCccccc
Q 030139          172 LG--EKPLFVLV  181 (182)
Q Consensus       172 l~--~~~~~~l~  181 (182)
                      |.  +.|+++|+
T Consensus       174 l~~~g~~v~sl~  185 (190)
T 2dy0_A          174 LEKQGITSYSLV  185 (190)
T ss_dssp             HHTTTCEEEEEE
T ss_pred             HhhCCCcEEEEE
Confidence            87  57888876

>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*

Probab=100.00  E-value=1.9e-32  Score=210.43  Aligned_cols=171  Identities=44%  Similarity=0.825  Sum_probs=149.4

Q ss_pred             hHHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCC---CccEEEeeCCCChhhHHHHHHHhCCCe
Q 030139           11 PRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK---NISVVAGIEARGFIFGPPIALAIGAKF   87 (182)
Q Consensus        11 ~~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~---~~d~Iv~v~~~G~~~a~~la~~l~vp~   87 (182)
                      +.++.|.+.+|..|+||.+|+.|+|...++.+++.++.+++.|++.+...   ++|+|+|++.+|+++|..+|..+++|+
T Consensus         4 ~~~~~l~~~i~~~~~~p~~g~~~~d~~~~l~~~~~~~~la~~l~~~~~~~~~~~~d~vv~v~~~G~~~a~~la~~l~~p~   83 (180)
T 1zn8_A            4 SELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGC   83 (180)
T ss_dssp             HHHHHHHTTCEEEETCSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTTHHHHHHHHHHHHTCEE
T ss_pred             HHHHHHHHHHhcCCCCCcCCeEEEecHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHhCCCE
Confidence            66888999999999999999999999999999999999999999887642   389999999999999999999999999


Q ss_pred             EeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcc
Q 030139           88 VPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELK  167 (182)
Q Consensus        88 ~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~  167 (182)
                      ...|+.++.++...+..++.+++.+.+.+..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++++.+
T Consensus        84 ~~~r~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~~  163 (180)
T 1zn8_A           84 VLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLK  163 (180)
T ss_dssp             EEEEETTCCCSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGGGC
T ss_pred             EEEEecCCCCcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEccCcc
Confidence            88887766555555555554445556766545457899999999999999999999999999999999999999998778


Q ss_pred             cccccCCCCccccc
Q 030139          168 GRERLGEKPLFVLV  181 (182)
Q Consensus       168 ~~~~l~~~~~~~l~  181 (182)
                      +++++.+.|+++|+
T Consensus       164 ~~~~l~~~~~~sl~  177 (180)
T 1zn8_A          164 GREKLAPVPFFSLL  177 (180)
T ss_dssp             HHHHHTTSCEEEEE
T ss_pred             hhhhhcCCceEEEE
Confidence            89999999999886

>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*

Probab=100.00  E-value=9.7e-32  Score=207.70  Aligned_cols=172  Identities=38%  Similarity=0.622  Sum_probs=148.4

Q ss_pred             chHHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe
Q 030139           10 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP   89 (182)
Q Consensus        10 ~~~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~   89 (182)
                      .++++.|++.+|.+|+||.+|+.|.|+..++.+++.++.+++.|++.+...++|+|+|+|.|||++|..+|+.+++|+..
T Consensus         2 ~~~~~~l~~~~~~~p~~p~~g~~~~d~~~~l~~~~~~~~l~~~la~~~~~~~~d~Iv~vp~rG~~~A~~la~~l~~p~~~   81 (186)
T 1l1q_A            2 TMSVADAHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVA   81 (186)
T ss_dssp             CCCHHHHHHTCEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEE
T ss_pred             chhHHHHHhhhccCCCCCCCCeEEEEhHHHhCCHHHHHHHHHHHHHHhhccCCCEEEEcCcccHHHHHHHHHHhCCCEEE
Confidence            35678899999999999999999999999999999999999999998876678999999999999999999999999988


Q ss_pred             eeccCCCCCceeeeeeeeeccce-eEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCe--EEEEEEEEecCCc
Q 030139           90 MRKPKKLPGEVISEEYSLEYGKD-VMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVH--VVECACVIELPEL  166 (182)
Q Consensus        90 ~rk~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~--~v~v~~l~~~~~~  166 (182)
                      .||+++.++...+..|+.+++.. .+.+..+...+|++||||||++|||+|+.++++.|+++|++  ++.+++++++.+.
T Consensus        82 ~rk~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~~  161 (186)
T 1l1q_A           82 LRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEAL  161 (186)
T ss_dssp             EEETTSSCSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGG
T ss_pred             EEecCCCCCceechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEEEEccCc
Confidence            88877666555444444333333 56665444568999999999999999999999999999999  9999999999877


Q ss_pred             ccccccCCCCccccc
Q 030139          167 KGRERLGEKPLFVLV  181 (182)
Q Consensus       167 ~~~~~l~~~~~~~l~  181 (182)
                      +|++++.++++.+++
T Consensus       162 ~g~~~l~~~~~~~~~  176 (186)
T 1l1q_A          162 KGREKVGQKCTRLFS  176 (186)
T ss_dssp             CHHHHHTTTCCCEEE
T ss_pred             cHHHHHhhcCcceeh
Confidence            899999998877664

>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*

Probab=100.00  E-value=6.6e-32  Score=215.95  Aligned_cols=173  Identities=31%  Similarity=0.576  Sum_probs=150.9

Q ss_pred             cchHHHHHhhccccC-CCCCCCCc-eEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEeeCCCChhhHHHHHHHhC
Q 030139            9 QDPRIAGISSAIRVI-PDFPKPGI-MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIG   84 (182)
Q Consensus         9 ~~~~~~~l~~~~r~~-~~~~~~~~-~~~d~~~l~~~~~~~~~~~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l~   84 (182)
                      -++..++|++.+|+. |+||.+|+ .|+|+..++.+++.++.+++.|++.+.+.  ++|+|+|++.||+++|..+|..++
T Consensus        15 ~~~~~~~l~~~i~~~~~dfp~~gip~~~D~~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~gG~~~a~~lA~~L~   94 (236)
T 1qb7_A           15 SHALSQLLKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELE   94 (236)
T ss_dssp             TSHHHHHHHHHCCEECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHHT
T ss_pred             ChHHHHHHHHHhcccCCCCCCCCCEeEEEhHhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEECcCcHHHHHHHHHHhC
Confidence            356788999999999 99999999 99999999999999999999999988764  789999999999999999999999


Q ss_pred             CCeEeeeccCCCCCcee-eeeeeeec---cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEE
Q 030139           85 AKFVPMRKPKKLPGEVI-SEEYSLEY---GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV  160 (182)
Q Consensus        85 vp~~~~rk~~~~~~~~~-~~~~~~~~---~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l  160 (182)
                      +|+.+.||.++.++... +..|..++   +.+.+++..+...+|++||||||++|||+|+.+++++|+++|+++++++++
T Consensus        95 ~p~~~~rk~~k~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l  174 (236)
T 1qb7_A           95 IPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSI  174 (236)
T ss_dssp             CCEEEEBCGGGCCSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             CCEEEEEEecCCCCcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEEE
Confidence            99999888776655544 44454444   344566665555799999999999999999999999999999999999999


Q ss_pred             EecCCcccccccC--------CCCccccc
Q 030139          161 IELPELKGRERLG--------EKPLFVLV  181 (182)
Q Consensus       161 ~~~~~~~~~~~l~--------~~~~~~l~  181 (182)
                      +++.+.+|++++.        ++|+++|+
T Consensus       175 ~~~~~~~g~~~l~~~~~~~~~g~~v~sl~  203 (236)
T 1qb7_A          175 LSIPFLKAAEKIHSTANSRYKDIKFISLL  203 (236)
T ss_dssp             EECGGGCHHHHHHHHHHHTTTTCCEEEEE
T ss_pred             EEcccccHHHHHhhhcccccCCCcEEEEE
Confidence            9998878889987        68898886

>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*

Probab=99.93  E-value=1e-25  Score=179.57  Aligned_cols=137  Identities=20%  Similarity=0.328  Sum_probs=111.6

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeec
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY  109 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~  109 (182)
                      .|+|...++.+|+.++.+++.|++.+.+.  ++|+|+|++.+|+++|..+|..+++|+.++||..+..+.          
T Consensus        57 ~Y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~vrk~~k~~G~----------  126 (234)
T 3m3h_A           57 IYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHGK----------  126 (234)
T ss_dssp             EEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHTCCEEEEC------------------
T ss_pred             EEEeCHHhccCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcCCCEEEEEEeeccCCc----------
Confidence            78999999999999999999999988763  789999999999999999999999999999887542221          


Q ss_pred             cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCcccccC
Q 030139          110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLVS  182 (182)
Q Consensus       110 ~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~~  182 (182)
                        .. .+ .+...+|++||||||++|||+|+.+++++|+++|++++++++++++...++.+++.  +.|+++|++
T Consensus       127 --~~-~i-~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v~sL~~  197 (234)
T 3m3h_A          127 --GN-QI-EGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVASYSLSD  197 (234)
T ss_dssp             ---C-CE-ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCEEESSC
T ss_pred             --ce-EE-ecccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCEEEEee
Confidence              11 01 14557899999999999999999999999999999999999999998778888885  478888864

>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*

Probab=99.93  E-value=9e-25  Score=169.72  Aligned_cols=167  Identities=21%  Similarity=0.296  Sum_probs=127.8

Q ss_pred             hHHHHHhhccccCCCCCCCCceEEe-chhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe
Q 030139           11 PRIAGISSAIRVIPDFPKPGIMFQD-ITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP   89 (182)
Q Consensus        11 ~~~~~l~~~~r~~~~~~~~~~~~~d-~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~   89 (182)
                      ..+++|.+.-++.++    ++.|.| +.+...++..++.+++.|++.+...++|+|+|+|.||+++|..+|+.+++|+..
T Consensus         6 ~l~~~l~~~~~~~~g----~~l~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~   81 (197)
T 1y0b_A            6 ALKRKIEEEGVVLSD----QVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVF   81 (197)
T ss_dssp             HHHHHHHHHCEEETT----TEEECTTTTSSEECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEEE
T ss_pred             HHHHHHhhCCEecCC----CEEEehhhhcccCCHHHHHHHHHHHHHHhhcCCCCEEEEEcccCHHHHHHHHHHhCCCEEE
Confidence            445666666666655    554432 122346899999999999999876678999999999999999999999999988


Q ss_pred             eeccCCCC--Cceeee-eeeeecc-ceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139           90 MRKPKKLP--GEVISE-EYSLEYG-KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus        90 ~rk~~~~~--~~~~~~-~~~~~~~-~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      .|+.++.+  +..... .+..+.+ ...+.+..+...+|++||||||++|||+|+.++++.|+++|++.+.+++++++.+
T Consensus        82 ~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~  161 (197)
T 1y0b_A           82 ARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSF  161 (197)
T ss_dssp             EBSSCCSSCCSSEEEEEEEETTTTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETT
T ss_pred             EEecCCCCCCCceEEEeeeccccCceEEEEEeccccCCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEecc
Confidence            88776544  332221 2221222 2335554344468999999999999999999999999999999999999999987


Q ss_pred             cccccccC--CCCccccc
Q 030139          166 LKGRERLG--EKPLFVLV  181 (182)
Q Consensus       166 ~~~~~~l~--~~~~~~l~  181 (182)
                      .+++++|.  +.|+++|+
T Consensus       162 ~~~~~~l~~~~~~~~sl~  179 (197)
T 1y0b_A          162 QPGRDELVKLGYRVESLA  179 (197)
T ss_dssp             STHHHHHHHTTCCEEEEE
T ss_pred             cchhhhHHhcCCcEEEEE
Confidence            78889887  46788875

>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1

Probab=99.92  E-value=2.9e-25  Score=169.38  Aligned_cols=158  Identities=20%  Similarity=0.250  Sum_probs=123.4

Q ss_pred             HHhhccccCCCCCCC-CceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeecc
Q 030139           15 GISSAIRVIPDFPKP-GIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKP   93 (182)
Q Consensus        15 ~l~~~~r~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~   93 (182)
                      .|++.+|.+|+|+.+ |+ |++...+..+++.++.+++.|++.+.. ++|+|+|++.||+++|..+|+.+++|+...+|+
T Consensus         7 ~~~~~~~~~~~~~~~~g~-~i~~~k~~~~~~~~~~~~~~la~~~~~-~~d~Iv~v~~gg~~~a~~la~~l~~p~~~~rk~   84 (175)
T 1vch_A            7 TVGGVTRHVPLIEPLPGR-RIPLVEFLGDPEFTRAAAEALRPLVPK-EAEILFTTETSPIPLTHVLAEALGLPYVVARRR   84 (175)
T ss_dssp             EETTEEEEECEEEEETTE-EEECCCCTTCHHHHHHHHHHHGGGSCT-TCCEEEEESSTHHHHHHHHHHHHTCCEEEEBSS
T ss_pred             EecceeeEcCceEcCCCc-EEEeeeccCCHHHHHHHHHHHHHHhcc-CCCEEEEeCCcChHHHHHHHHHhCCCEEEEEec
Confidence            477899999999976 64 689999999999999999999988865 789999999999999999999999999888776


Q ss_pred             CCC--CCceeeeeeeeecc-ceeEEEEcccc--CCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCccc
Q 030139           94 KKL--PGEVISEEYSLEYG-KDVMEMHVGAV--QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG  168 (182)
Q Consensus        94 ~~~--~~~~~~~~~~~~~~-~~~~~l~~~~~--~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~  168 (182)
                      .+.  +.......+..+.+ .+.+.+..+..  .+|++||||||++|||+|+.++++.|+++|++.+.+++++++...  
T Consensus        85 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~~--  162 (175)
T 1vch_A           85 RRPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTP--  162 (175)
T ss_dssp             CCTTCCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSCC--
T ss_pred             CCCCCCcceeeeeeccccCCceEEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEEEecCCC--
Confidence            543  22111111111111 23455433222  489999999999999999999999999999999999999998642  


Q ss_pred             ccccCCCCccccc
Q 030139          169 RERLGEKPLFVLV  181 (182)
Q Consensus       169 ~~~l~~~~~~~l~  181 (182)
                           ..|+++|+
T Consensus       163 -----~~~~~sl~  170 (175)
T 1vch_A          163 -----GLAVDTVA  170 (175)
T ss_dssp             -----SSCCEEEE
T ss_pred             -----CcceEEEE
Confidence                 56666664

>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*

Probab=99.92  E-value=2.2e-24  Score=177.07  Aligned_cols=161  Identities=23%  Similarity=0.407  Sum_probs=123.7

Q ss_pred             HHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeee
Q 030139           12 RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR   91 (182)
Q Consensus        12 ~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~r   91 (182)
                      .++.|.+.-+.+|+    +  |.+...++.+|..++.+++.+++.+.+.++|+|+|+|.+|+++|..+|+.+++|+.+.|
T Consensus        87 l~~~l~~~~~v~~G----~--f~~~~~ll~~p~l~~~la~~la~~~~~~~~d~Iv~V~~rG~~~A~~lA~~L~vp~v~~r  160 (291)
T 1o57_A           87 LGQSLANPERILPG----G--YVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVR  160 (291)
T ss_dssp             HHHHHTCGGGEETT----T--EECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEEEB
T ss_pred             HHHHHHHCCCcccC----C--eEEehhhhCCHHHHHHHHHHHHHHhhccCCCEEEEECCCCHHHHHHHHHHhCCCEEEEE
Confidence            34444444455555    5  45688899999999999999999997777899999999999999999999999999888


Q ss_pred             ccCCC-CCceeeeeeeeec--cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCccc
Q 030139           92 KPKKL-PGEVISEEYSLEY--GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG  168 (182)
Q Consensus        92 k~~~~-~~~~~~~~~~~~~--~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~  168 (182)
                      |.++. ++...+..|....  ....+.+......+|++||||||++|||+|+.++++.|+++||+++++++++++.+.  
T Consensus       161 k~~~~t~~~~~~~~~~~g~~~~~~~~~l~~~~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vlvdr~~~--  238 (291)
T 1o57_A          161 KDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGV--  238 (291)
T ss_dssp             CC-----CCEEEEEEECSSCCSEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESSC--
T ss_pred             EeccCCCCceeeeeeecccccceeeEEEecccCCCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEEEEcCcc--
Confidence            77654 3444443342211  123466655455799999999999999999999999999999999999999999753  


Q ss_pred             ccccCCCCccccc
Q 030139          169 RERLGEKPLFVLV  181 (182)
Q Consensus       169 ~~~l~~~~~~~l~  181 (182)
                      ++++. .|++||+
T Consensus       239 ~~~l~-~~~~SL~  250 (291)
T 1o57_A          239 DERLV-DEYMSLL  250 (291)
T ss_dssp             TTSCC-SCCEEEE
T ss_pred             ccccC-CceEEEE
Confidence            44443 6788775

>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}

Probab=99.92  E-value=3.3e-25  Score=177.46  Aligned_cols=137  Identities=23%  Similarity=0.347  Sum_probs=117.1

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeec
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY  109 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~  109 (182)
                      .|+|...++.+|+.++.+++.|++.+.+.  ++|+|+|++.+|+++|..+|..+++|+.++||.++..+..         
T Consensus        69 ~Y~d~~~~l~~p~~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~vrk~~k~~G~~---------  139 (243)
T 3dez_A           69 IYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYIRSKPKDHGAG---------  139 (243)
T ss_dssp             EEECTTGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTTCCEEEECSSCC--------------
T ss_pred             EEEeCHHhccCHHHHHHHHHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcCCCEEEEEEeeccCCce---------
Confidence            68999999999999999999999988763  7999999999999999999999999999998876532210         


Q ss_pred             cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCcccccC
Q 030139          110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLVS  182 (182)
Q Consensus       110 ~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~~  182 (182)
                        ..+   .+...+|++||||||++|||+|+.+++++|+++|++++++++++++...++++++.  +.++++|++
T Consensus       140 --~~i---eg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~~sL~~  209 (243)
T 3dez_A          140 --NQI---EGRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKLVTLSN  209 (243)
T ss_dssp             --CCE---ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESSC
T ss_pred             --eEE---EeccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCCEEEEee
Confidence              011   14558899999999999999999999999999999999999999998778888886  467888763

>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}

Probab=99.91  E-value=3.6e-24  Score=164.46  Aligned_cols=136  Identities=21%  Similarity=0.287  Sum_probs=111.4

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCe--EeeeccCCCCCceeeeeeeeec
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEY  109 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~--~~~rk~~~~~~~~~~~~~~~~~  109 (182)
                      .|+|...++.+|+.++.+++.|++.+.+.++|+|+|+|.+|+++|..+|+.+++|+  .+.|+..+.            +
T Consensus        34 ~y~d~~~~~~~~~~~~~l~~~la~~i~~~~~d~vv~v~~gG~~~a~~la~~l~~~~~~~~~rk~~~~------------~  101 (180)
T 2p1z_A           34 YYVDLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADGREIHAFVVRKEAKK------------H  101 (180)
T ss_dssp             -CCCTHHHHTSHHHHHHHHHHHHHTTTTSCCSEEEEETTTHHHHHHHHHHSSSSCCEEEEECSCCC-------------C
T ss_pred             EEEEChhhcCCHHHHHHHHHHHHHHHhhcCCCEEEEecCCCHHHHHHHHHHHCCCCCeEEEEecccc------------c
Confidence            57899999999999999999999998777899999999999999999999998764  555554321            1


Q ss_pred             cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCcccccC
Q 030139          110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLVS  182 (182)
Q Consensus       110 ~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~~  182 (182)
                      +... .+. +...+|++|+||||++|||+|+.++++.|+++|++++++++++++.+ ++++++.  ++|++||+.
T Consensus       102 g~~~-~~~-g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~-~g~~~l~~~g~~~~sl~~  173 (180)
T 2p1z_A          102 GMQR-RIE-GPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRAT-GAADVIAAEGLEYRYILG  173 (180)
T ss_dssp             C-CC-SEE-SSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CC-CHHHHHHTTTCCEEEEEC
T ss_pred             cchh-hcc-CCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCc-chHHHHHhcCCeEEEEEE
Confidence            1111 011 34478999999999999999999999999999999999999999975 7888885  588998864

>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}

Probab=99.91  E-value=5.2e-24  Score=163.27  Aligned_cols=134  Identities=24%  Similarity=0.362  Sum_probs=112.2

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHh-cCC-CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeec
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERY-KDK-NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY  109 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~-~~~-~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~  109 (182)
                      .|.|+..++.+|+..+.++..+++.+ .+. ++|+|+|++.||+++|..+|+.+++|+.+.|+..+.            +
T Consensus        27 ~f~d~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~iv~v~~~G~~~a~~la~~l~~p~~~~r~~~~~------------~   94 (178)
T 2yzk_A           27 VYIDMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLALRLSKPLGYVRPERKG------------H   94 (178)
T ss_dssp             EEECGGGGTTCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTTTHHHHHHHHHHHTCCEEEECCCCTT------------S
T ss_pred             eEEEChHhccCHHHHHHHHHHHHHHHhcccCCCCEEEEecccchHHHHHHHHHHCCCEEEEEccccc------------c
Confidence            58899999999999999999999888 553 689999999999999999999999999887765431            1


Q ss_pred             cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCccccc
Q 030139          110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV  181 (182)
Q Consensus       110 ~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~  181 (182)
                      +... .+ .+. .+|++|+||||++|||+|+.++++.|++.|++++.+++++++.+ ++.+++.  +.|+++|+
T Consensus        95 g~~~-~i-~~~-~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~-~~~~~l~~~g~~~~sl~  164 (178)
T 2yzk_A           95 GTLS-QV-EGD-PPKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGE-GAGELLARMGVRLVSVA  164 (178)
T ss_dssp             CCCC-CC-BTC-CCSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCS-SHHHHHHTTTCEEEEEE
T ss_pred             Cccc-ee-ccc-CCCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCc-CHHHHHHHcCCcEEEEe
Confidence            1111 01 123 58999999999999999999999999999999999999999875 7788886  46788876

>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}

Probab=99.91  E-value=7.7e-24  Score=165.76  Aligned_cols=135  Identities=18%  Similarity=0.407  Sum_probs=113.4

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeec
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY  109 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~  109 (182)
                      .|+|+..++.+|..++.+++.|++.+..  .++|+|+|+|.+|+++|..+|..+++|+.+.||..+.            +
T Consensus        31 ~y~d~~~l~~~~~~~~~l~~~la~~i~~~~~~~d~Iv~v~~~g~~~a~~la~~l~~p~~~~rk~~k~------------~   98 (205)
T 2wns_A           31 IYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKD------------Y   98 (205)
T ss_dssp             EEECGGGGGGSHHHHHHHHHHHHHHHHHTTCCCSEEEECTTTTHHHHHHHHHHHTCCEEEECCTTTT------------S
T ss_pred             EEEeChHhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEcCCchHHHHHHHHHHHCcCEEEEecCcCc------------c
Confidence            6889999999999999999999998865  5789999999999999999999999999887765431            1


Q ss_pred             cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCccccc
Q 030139          110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV  181 (182)
Q Consensus       110 ~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~  181 (182)
                      +.... + .+...+|++||||||++|||+|+.++++.|+++|++++++++++++. .++.+++.  +.|+++|+
T Consensus        99 g~~~~-~-~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~-~~~~~~l~~~g~~v~sl~  169 (205)
T 2wns_A           99 GTKRL-V-EGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDRE-QGGKDKLQAHGIRLHSVC  169 (205)
T ss_dssp             SSCCS-E-ESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECC-SSHHHHHHTTTCEEEEEE
T ss_pred             Ccccc-c-cCCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcC-cchHHHHHHcCCeEEEEE
Confidence            11110 1 14446899999999999999999999999999999999999999995 57778875  46788875

>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}

Probab=99.90  E-value=2.6e-23  Score=165.45  Aligned_cols=144  Identities=16%  Similarity=0.264  Sum_probs=112.9

Q ss_pred             cccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHh------CCCeEeee
Q 030139           20 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMR   91 (182)
Q Consensus        20 ~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l------~vp~~~~r   91 (182)
                      +.+-++..+|  .|+|.. ++.+|..++.+++.+++.+.+  .++|+|+|++.+|+++|..+|..|      ++|+.+.|
T Consensus        41 F~L~SG~~Sp--~y~d~~-~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~~~~R  117 (232)
T 3mjd_A           41 FTLKSGRISP--YFFNAG-LFNTGAQLATLADYYAQLIIKSDVKYDILFGPAYKGIPLVAAISTVLALKYNIDMPYAFDR  117 (232)
T ss_dssp             EECTTSCEEE--EEECGG-GCCBHHHHHHHHHHHHHHHHHCCCCCSEEEECTTTHHHHHHHHHHHHHHHHCCCCBEEEEC
T ss_pred             EEecCCCccc--eEeccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhhcCCCCcEEEEE
Confidence            3444454444  678874 678999999999999999875  479999999999999999999997      89999998


Q ss_pred             ccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccc--
Q 030139           92 KPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGR--  169 (182)
Q Consensus        92 k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~--  169 (182)
                      |..+..            +.... + .+...+|++||||||++|||+|+.+++++|+++|++++++++++++.+ +|+  
T Consensus       118 K~~k~~------------g~~~~-i-~g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e-~g~~~  182 (232)
T 3mjd_A          118 KEAKDH------------GEGGV-F-VGADMTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSIDRQE-KAKDS  182 (232)
T ss_dssp             CC-------------------CC-E-EESCCTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCB-CCTTS
T ss_pred             eecccC------------CCCce-E-eccCCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCc-CCccc
Confidence            865421            11110 1 133468999999999999999999999999999999999999999975 454  


Q ss_pred             ------cccC--CCCccccc
Q 030139          170 ------ERLG--EKPLFVLV  181 (182)
Q Consensus       170 ------~~l~--~~~~~~l~  181 (182)
                            +.+.  ++|++||+
T Consensus       183 ~~~a~~~~~~~~gv~v~sL~  202 (232)
T 3mjd_A          183 DISATKKISQDFNIPVLAVT  202 (232)
T ss_dssp             SSCHHHHHHHHHCCCEEEEE
T ss_pred             cchhHHHHHHHcCCcEEEEE
Confidence                  3332  57888886

>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A

Probab=99.90  E-value=3e-23  Score=163.33  Aligned_cols=133  Identities=18%  Similarity=0.337  Sum_probs=111.1

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHh------CCCeEeeeccCCCCCceeee
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRKPKKLPGEVISE  103 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l------~vp~~~~rk~~~~~~~~~~~  103 (182)
                      .|+| ..++.+++.++.+++.|++.+.+  .++|+|+|++.+|+++|..+|..+      ++|+.+.||..+..+.    
T Consensus        33 ~y~d-~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~~~~rk~~~~~~~----  107 (213)
T 1lh0_A           33 YFFN-AGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGE----  107 (213)
T ss_dssp             EEEC-GGGCCBHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEECSSCCSSTT----
T ss_pred             EEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHHHHHhhCCCCCEEEEEeccCccCC----
Confidence            6778 57889999999999999998865  368999999999999999999999      8999988876542211    


Q ss_pred             eeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCccccccc---------CC
Q 030139          104 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL---------GE  174 (182)
Q Consensus       104 ~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l---------~~  174 (182)
                             ...+.   +...+| +||||||++|||+|+.++++.|+++|++++++++++++.+ +|++++         .+
T Consensus       108 -------~~~~~---g~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~-~g~~~l~~~~~~~~~~g  175 (213)
T 1lh0_A          108 -------GGSLV---GSALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQE-RGRGEISAIQEVERDYG  175 (213)
T ss_dssp             -------CSSEE---ESCCCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCB-BCSSSSBHHHHHHHHHC
T ss_pred             -------CCcee---CCCCCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEccc-CcccchhhHHHHHHHcC
Confidence                   01111   234689 9999999999999999999999999999999999999987 777776         46


Q ss_pred             CCccccc
Q 030139          175 KPLFVLV  181 (182)
Q Consensus       175 ~~~~~l~  181 (182)
                      +|++||+
T Consensus       176 ~~v~sl~  182 (213)
T 1lh0_A          176 CKVISII  182 (213)
T ss_dssp             CEEEEEE
T ss_pred             CCeEEEE
Confidence            8888886

>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}

Probab=99.90  E-value=6e-23  Score=177.51  Aligned_cols=142  Identities=23%  Similarity=0.389  Sum_probs=118.2

Q ss_pred             CCC-CCCc---eEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCce
Q 030139           25 DFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEV  100 (182)
Q Consensus        25 ~~~-~~~~---~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~  100 (182)
                      .|. .+|.   .|+|+..++.+|+.++.+++.|++.+.+.++|+|+|++.+|+++|..+|..+++|+.+.||..+.    
T Consensus       276 ~F~L~SG~~S~~y~D~~~l~~~p~~~~~l~~~la~~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~p~~~~rk~~k~----  351 (453)
T 3qw4_B          276 NFTLKSGKSSPIYIDLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNVPLIYPRREAKI----  351 (453)
T ss_dssp             CCBCTTSSBCSEEECCGGGGGCHHHHHHHHHHHHHHHTTSCCSEEEECTTTTHHHHHHHHHHHCCCEEEESSCC------
T ss_pred             CEeccCCCcCCEEEechHhccCHHHHHHHHHHHHHHhccCCCCEEEeccCCcHHHHHHHHHHhCCCEEEEEeeccc----
Confidence            455 4443   68999999999999999999999999877899999999999999999999999999999887541    


Q ss_pred             eeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCcc
Q 030139          101 ISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLF  178 (182)
Q Consensus       101 ~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~  178 (182)
                              ++.... + .+...+|++||||||++|||+|+.++++.|+++|++++++++++++.+ ++++++.  ++|++
T Consensus       352 --------~g~~~~-i-~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~~-~g~~~l~~~g~~v~  420 (453)
T 3qw4_B          352 --------YGTKAA-I-EGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRDM-GAKAFLNKLGYDFE  420 (453)
T ss_dssp             -------------C-E-ESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECSS-SHHHHHHHTTCCEE
T ss_pred             --------cCcCce-E-ecccCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECCc-chHHHHHhcCCCEE
Confidence                    122111 1 134578999999999999999999999999999999999999999974 7888875  57888


Q ss_pred             ccc
Q 030139          179 VLV  181 (182)
Q Consensus       179 ~l~  181 (182)
                      ||+
T Consensus       421 sL~  423 (453)
T 3qw4_B          421 AVV  423 (453)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            886

>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1

Probab=99.89  E-value=5.3e-23  Score=161.56  Aligned_cols=136  Identities=25%  Similarity=0.350  Sum_probs=113.4

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeec
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY  109 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~  109 (182)
                      .|+|...++.+|..++.+++.|++.+..  .++|+|+|++.||+++|..+|+.+++|+.++||.++..+.          
T Consensus        37 ~~~D~~~l~~~~~~~~~~~~~la~~i~~~~~~~d~vv~v~~~g~~~a~~la~~l~~p~~~~rk~~~~~g~----------  106 (211)
T 2aee_A           37 IYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGA----------  106 (211)
T ss_dssp             EEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC--------------
T ss_pred             eEEeChhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEeccCcHHHHHHHHHHhCCCEEEEEeecCCcCC----------
Confidence            5789999999999999999999988864  3679999999999999999999999999888876542111          


Q ss_pred             cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCccccc
Q 030139          110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV  181 (182)
Q Consensus       110 ~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~  181 (182)
                       ...+  . +...+|++||||||++|||+|+.++++.|++.|++++++++++++...++.+++.  +.|+++++
T Consensus       107 -~~~i--~-g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~  176 (211)
T 2aee_A          107 -GNQI--E-GRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLS  176 (211)
T ss_dssp             -CCSE--E-SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESC
T ss_pred             -ccee--c-CCCCCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecccccHHHHHHhCCCCEEEEe
Confidence             0111  1 3457899999999999999999999999999999999999999997667888886  36666664

>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}

Probab=99.89  E-value=1.1e-22  Score=162.13  Aligned_cols=142  Identities=19%  Similarity=0.314  Sum_probs=110.8

Q ss_pred             ccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHh------CCCeEeeec
Q 030139           21 RVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRK   92 (182)
Q Consensus        21 r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l------~vp~~~~rk   92 (182)
                      .+-++.++|  .|+|. .++.+|..++.+++.+++.+.+  .++|+|+|++.+|+++|..+|..|      ++|+.+.||
T Consensus        49 ~L~SG~~Sp--~y~d~-~ll~~p~~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~~RK  125 (238)
T 3n2l_A           49 TLKSGRKSP--YFFNA-GLFNTGRDLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTTAVALADHHDVDTPYCFNRK  125 (238)
T ss_dssp             ECSSSCEEE--EEECG-GGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSCCCCBEEEECC
T ss_pred             EecCCCccc--EEEEC-CCCCCHHHHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHHHHHHhHhhCCCccEEEEee
Confidence            333444444  67886 5789999999999999998874  479999999999999999999997      899999988


Q ss_pred             cCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccc-
Q 030139           93 PKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER-  171 (182)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~-  171 (182)
                      ..+..+.           ...+.   +...+| +||||||++|||+|+.+++++|+++|++++++++++++.+ +|++. 
T Consensus       126 ~~k~~g~-----------~~~i~---G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~e-gG~~~l  189 (238)
T 3n2l_A          126 EAKNHGE-----------GGNLV---GSKLEG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVAIDRQE-KGKGEL  189 (238)
T ss_dssp             C-------------------CEE---ESCCCS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCC-BCSSSS
T ss_pred             ccCCCCC-----------CceEe---ccccCC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEEEEccc-Cccchh
Confidence            7653211           01111   334689 9999999999999999999999999999999999999974 44443 


Q ss_pred             -----c---CCCCccccc
Q 030139          172 -----L---GEKPLFVLV  181 (182)
Q Consensus       172 -----l---~~~~~~~l~  181 (182)
                           +   .++|++||+
T Consensus       190 ~a~~~~~~~~Gv~v~SL~  207 (238)
T 3n2l_A          190 SAIQEVERDFGCAVISIV  207 (238)
T ss_dssp             BHHHHHHHHHCCEEEEEE
T ss_pred             hHHHHHHHHcCCCEEEEE
Confidence                 2   357888876

>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*

Probab=99.89  E-value=1.1e-22  Score=161.49  Aligned_cols=134  Identities=17%  Similarity=0.275  Sum_probs=110.2

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHh---------CCCeEeeeccCCCCCce
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI---------GAKFVPMRKPKKLPGEV  100 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l---------~vp~~~~rk~~~~~~~~  100 (182)
                      .|+| ..++.+++.++.+++.|++.+.+  .++|+|++++.+|+++|..+|+.+         ++|+.+.||.++.    
T Consensus        37 ~y~d-~~ll~~~~~~~~l~~~la~~i~~~~~~~d~Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~~~rk~~k~----  111 (226)
T 2ps1_A           37 YFFN-LGLFNTGKLLSNLATAYAIAIIQSDLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEAKD----  111 (226)
T ss_dssp             EEEC-GGGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEEEEEEEEES----
T ss_pred             EEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHhhhccccCCCCEEEEechhhh----
Confidence            5778 56889999999999999998865  368999999999999999999999         9999888775431    


Q ss_pred             eeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCccccc----c-----
Q 030139          101 ISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE----R-----  171 (182)
Q Consensus       101 ~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~----~-----  171 (182)
                              ++.+.+..  +...+|++||||||++|||+|+.++++.|+++|++++++++++++.+. +++    +     
T Consensus       112 --------~g~~~~~~--~~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~dr~~~-g~~~~~~~~~~~~  180 (226)
T 2ps1_A          112 --------HGEGGIIV--GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDRQEV-VSTDDKEGLSATQ  180 (226)
T ss_dssp             --------STTCEEEE--ESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCBB-SCTTCSSCCBHHH
T ss_pred             --------cCCCceEe--cCCCCcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEEccCc-ccccccccchHHH
Confidence                    12222222  234689999999999999999999999999999999999999999863 443    1     


Q ss_pred             ----cCCCCccccc
Q 030139          172 ----LGEKPLFVLV  181 (182)
Q Consensus       172 ----l~~~~~~~l~  181 (182)
                          ..+.|++||+
T Consensus       181 ~~~~~~g~~v~sl~  194 (226)
T 2ps1_A          181 TVSKKYGIPVLSIV  194 (226)
T ss_dssp             HHHHHHTCCEEEEE
T ss_pred             HHHHhcCCeEEEEe
Confidence                3468898886

>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*

Probab=99.83  E-value=4.8e-20  Score=144.05  Aligned_cols=135  Identities=16%  Similarity=0.200  Sum_probs=104.7

Q ss_pred             cCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCe--EeeeccCCC
Q 030139           22 VIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKL   96 (182)
Q Consensus        22 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~--~~~rk~~~~   96 (182)
                      .-|.||+++++..|+..++.+++.++..++.|++++.+   .+.++|||+++||+++|..+|+.+++|+  .++++++..
T Consensus        16 ~~~~f~~~~~~~~di~~~l~s~~~i~~~i~~LA~~I~~~~~~~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~~~Y~   95 (204)
T 3hvu_A           16 ENLYFQSNAMMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSSYG   95 (204)
T ss_dssp             ---CCCCCCCGGGGEEEEEECHHHHHHHHHHHHHHHHHHTSSSCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECS
T ss_pred             CCCCCCCchhhhhcCCcEeCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEEEEec
Confidence            35789999997778888999999999999999987753   2589999999999999999999999985  344433211


Q ss_pred             CCceeeeeeeeeccceeEEEEc--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139           97 PGEVISEEYSLEYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~l~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      .+         +...+.+.+..  ....+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus        96 ~~---------~~~~~~v~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~  157 (204)
T 3hvu_A           96 HS---------TVSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPT  157 (204)
T ss_dssp             GG---------GTTSCCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGG
T ss_pred             CC---------CccCCcEEEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCC
Confidence            00         00111222221  23478999999999999999999999999999999999999999863

>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1

Probab=99.81  E-value=1.7e-19  Score=134.40  Aligned_cols=120  Identities=20%  Similarity=0.262  Sum_probs=91.9

Q ss_pred             hhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeE-eeeccCCCCCceeeeeeeeeccceeEEEE
Q 030139           39 LLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFV-PMRKPKKLPGEVISEEYSLEYGKDVMEMH  117 (182)
Q Consensus        39 l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~-~~rk~~~~~~~~~~~~~~~~~~~~~~~l~  117 (182)
                      ++.+++.++.+++.|++.+.+.++|+|+|+++||+++|..+|+.+++|+. .+++.+....+.       ......+...
T Consensus         4 ~~~s~~~~~~~~~~la~~i~~~~~d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~   76 (153)
T 1vdm_A            4 VYLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDE-------RGEKPVITIP   76 (153)
T ss_dssp             EECCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--C-------CCSSCEEEEC
T ss_pred             eECCHHHHHHHHHHHHHHHHccCCCEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCcc-------cccceeEecc
Confidence            45678888899999998886557899999999999999999999999965 333222111000       0001123322


Q ss_pred             ccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139          118 VGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus       118 ~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      .....+|++||||||++|||+|+.++++.|+++|++.+.+++++.+..
T Consensus        77 ~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~  124 (153)
T 1vdm_A           77 IHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPW  124 (153)
T ss_dssp             CCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTT
T ss_pred             CCcCCCCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCC
Confidence            234578999999999999999999999999999999999999999864

>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A

Probab=99.79  E-value=3.7e-19  Score=141.71  Aligned_cols=143  Identities=17%  Similarity=0.140  Sum_probs=104.9

Q ss_pred             CCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEeeec-cCCCCC
Q 030139           23 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVPMRK-PKKLPG   98 (182)
Q Consensus        23 ~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk-~~~~~~   98 (182)
                      ...|+.|+..+.|+..++.+++.++..++.|++++.+   .++++|+|+++||+++|..+|+.|+.++...+. ..+.+-
T Consensus        32 ~~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~~~~P~  111 (233)
T 1fsg_A           32 ADDFLVPPHCKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPF  111 (233)
T ss_dssp             GGGSCCCTTTTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSCSC
T ss_pred             cccCccCCcchhhCcEEeeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEEccCCHHHHHHHHHHhCCcccccccccCCCCc
Confidence            4468888876678888999999999999999988753   478999999999999999999999874322221 111111


Q ss_pred             --ceee-eeeeeeccceeEEEEcc--ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139           99 --EVIS-EEYSLEYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus        99 --~~~~-~~~~~~~~~~~~~l~~~--~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                        .+.. ..|..+...+...+..+  ...+||+||||||+++||+|+.++++.|++.|++.+.+++++++++
T Consensus       112 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~  183 (233)
T 1fsg_A          112 FEHYVRLKSYQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRT  183 (233)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred             EEEEEEEEeccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence              0111 12221111122333221  3478999999999999999999999999999999999999999764

>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1

Probab=99.78  E-value=8.9e-19  Score=134.45  Aligned_cols=125  Identities=13%  Similarity=0.209  Sum_probs=94.8

Q ss_pred             EEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCceeeeeeee
Q 030139           33 FQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSL  107 (182)
Q Consensus        33 ~~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~~~~~~~~~  107 (182)
                      +.|+..++.+++.++..+..|++++.+   .++++|+|+++||+++|..+|+.+++|+..  ++..+. ...     .  
T Consensus         7 ~~di~~~l~~~~~i~~~~~~la~~i~~~~~~~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~~~y-~~~-----~--   78 (183)
T 1hgx_A            7 MDDLERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICSSY-SGT-----K--   78 (183)
T ss_dssp             CTTEEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEEC-------------
T ss_pred             CcCcceEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEEEec-CCc-----c--
Confidence            457778899999999999999988863   368999999999999999999999999754  211111 000     0  


Q ss_pred             eccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139          108 EYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus       108 ~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      ..+...+........+|++||||||+++||+|+.++++.|++.|++.+.+++++++..
T Consensus        79 ~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~  136 (183)
T 1hgx_A           79 STGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI  136 (183)
T ss_dssp             ----CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred             cccceEEeecCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence            0011111111123478999999999999999999999999999999999999998753

>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*

Probab=99.77  E-value=2.6e-18  Score=140.49  Aligned_cols=115  Identities=23%  Similarity=0.316  Sum_probs=94.3

Q ss_pred             HHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEE-ccccCCCCeEEE
Q 030139           51 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMH-VGAVQAGERALI  129 (182)
Q Consensus        51 ~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~gk~Vll  129 (182)
                      ..|++++.+.+.++|++++.||+++|..+|+.+|+|+.+++|+++.++              ...+. .....+|++|+|
T Consensus       143 ~~la~~i~~~~~~vVV~pd~Gg~~~A~~lA~~L~~p~~~i~K~r~~~g--------------~v~i~~~~~dv~gk~vli  208 (286)
T 3lrt_A          143 DAIVRYYKNVDVDYVVSPDDGGLARVADISAKLGKKHFFIEKKRIDDR--------------TVEMKVPNVDVNGKKLLI  208 (286)
T ss_dssp             HHHHHHHTTSCCSEEEESSSSSHHHHHHHHHHHTCEEEEEEEEEETTE--------------EEEEEESCCCCTTCEEEE
T ss_pred             HHHHHHHHhcCCCEEEEECCCccHHHHHHHHHhCCCeEEEeeeecCCC--------------cEEEeeccccCCcCEEEE
Confidence            445555655678999999999999999999999999998887653221              11111 123478999999


Q ss_pred             EecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139          130 VDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL  180 (182)
Q Consensus       130 VDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l  180 (182)
                      |||+++||+|+.++++.|++.|++.+.++++|+.++.++.++| +.++..+
T Consensus       209 VDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~th~v~s~~a~~~l-~s~i~~v  258 (286)
T 3lrt_A          209 VDDIISTGGTIAKSSGLLREKGASKIYVSAVHGLFVNGSENKI-LQNADEI  258 (286)
T ss_dssp             EEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHH-TTTCSEE
T ss_pred             EeccccccHHHHHHHHHHHhCCCCEEEEEEEEeecCchHHHHH-HcCCCEE
Confidence            9999999999999999999999999999999999988999999 7776544

>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*

Probab=99.77  E-value=1e-18  Score=137.71  Aligned_cols=133  Identities=15%  Similarity=0.186  Sum_probs=101.1

Q ss_pred             CCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhC---------CCe--E
Q 030139           23 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIG---------AKF--V   88 (182)
Q Consensus        23 ~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~---------vp~--~   88 (182)
                      .++|+.|+.++.|+..++.+++.++...+.|++++..   .+.++|+|+++||+++|..+|+.|+         +|+  .
T Consensus        18 ~~~f~~~~~~~~di~~il~~~~~~~~~~~~La~~i~~~~~~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~g~~~~~~~   97 (217)
T 1z7g_A           18 LDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVD   97 (217)
T ss_dssp             GGGSCCCGGGTTTEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEEEE
T ss_pred             ccccccCcccccccceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHHhCCccccCCCceEeeee
Confidence            4467788877778888999999999999999988763   4689999999999999999999998         564  2


Q ss_pred             eeeccCCCCCceeeeeeeeeccceeEEEEc---cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139           89 PMRKPKKLPGEVISEEYSLEYGKDVMEMHV---GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus        89 ~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      +++..+.          ..+...+.+.+..   ....+|++||||||+++||+||.++++.|++.|++.+.+++++++.+
T Consensus        98 ~i~~~~y----------~~~~~~~~~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~~  167 (217)
T 1z7g_A           98 FIRLKSY----------CNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRT  167 (217)
T ss_dssp             EECBC--------------------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred             eEEEEEe----------cccccccceEEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECcc
Confidence            3332111          0000011111111   12478999999999999999999999999999999999999999764

>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*

Probab=99.76  E-value=1.1e-18  Score=139.91  Aligned_cols=140  Identities=16%  Similarity=0.192  Sum_probs=103.2

Q ss_pred             CCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEe-eeccCCCCCce-
Q 030139           26 FPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEV-  100 (182)
Q Consensus        26 ~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~-~rk~~~~~~~~-  100 (182)
                      |..|.-++.|+..++.+++.++...+.|++++.+   .+.++|+|+++||+.+|..+++.++.+++. .||..+.+-+. 
T Consensus        49 f~~p~~~~~di~~vli~~~~I~~~i~~LA~~I~~~~~~~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~gklP~~v~  128 (250)
T 3ozf_A           49 FMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEH  128 (250)
T ss_dssp             SCCCGGGGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred             ccCchhhhccCeEEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhccccccccccccCCCceEE
Confidence            3334434457777899999999999999987753   357899999999999999999999844332 23333333221 


Q ss_pred             -e-eeeeeeeccceeEEEEcc--ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139          101 -I-SEEYSLEYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus       101 -~-~~~~~~~~~~~~~~l~~~--~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                       . ...|..+++.+.+.+..+  ...+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus       129 fI~~ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~~  197 (250)
T 3ozf_A          129 YVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRT  197 (250)
T ss_dssp             EEEEEEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEECC
T ss_pred             EEEEEEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence             1 123433333334455433  2368999999999999999999999999999999999999999874

>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}

Probab=99.76  E-value=2.9e-18  Score=135.85  Aligned_cols=130  Identities=18%  Similarity=0.266  Sum_probs=97.6

Q ss_pred             CCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhC---------CCe--Eeee
Q 030139           26 FPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIG---------AKF--VPMR   91 (182)
Q Consensus        26 ~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~---------vp~--~~~r   91 (182)
                      |+.|+..+.|+..++.+++.+...+..|++++.+   .+.++|+|++.||+++|..+|+.|+         +|+  .+++
T Consensus        29 F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~~p~~~~~i~  108 (225)
T 2jbh_A           29 FTYPQHYYGDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRFVSMKVDFIR  108 (225)
T ss_dssp             SCCCGGGTTSEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCCCCEEEEEEE
T ss_pred             CccCccccccCceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCCEehhHHHHHHhhhhccccccCCCceEEEEE
Confidence            4566655567788899999999999999987763   4689999999999999999999998         664  3333


Q ss_pred             ccCCCCCceeeeeeeeeccceeEEEEc--c-ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139           92 KPKKLPGEVISEEYSLEYGKDVMEMHV--G-AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus        92 k~~~~~~~~~~~~~~~~~~~~~~~l~~--~-~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      ..+.          ..+...+.+.+..  . ...+||+||||||+++||+||.++++.|++.|++.+.++++++++.
T Consensus       109 ~~~y----------~~~~~~~~~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~  175 (225)
T 2jbh_A          109 LKSY----------RNDQSMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRT  175 (225)
T ss_dssp             EC--------------------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred             EEec----------cCccccccEEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence            2211          0000111111221  1 3478999999999999999999999999999999999999998764

>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}

Probab=99.75  E-value=4e-18  Score=131.13  Aligned_cols=123  Identities=16%  Similarity=0.177  Sum_probs=91.8

Q ss_pred             chhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCe--EeeeccCCCCCceeeeeeeeecc
Q 030139           36 ITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEYG  110 (182)
Q Consensus        36 ~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~--~~~rk~~~~~~~~~~~~~~~~~~  110 (182)
                      +..++.+++.++..+..|++++..   .++++|+|++.||+++|..+|+.+++|+  ..+++.+...+. .      ..+
T Consensus        12 ~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~~~y~~~~-~------~~~   84 (185)
T 2geb_A           12 IEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSST-K------SSG   84 (185)
T ss_dssp             EEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSTTH-H------HHC
T ss_pred             cceEEeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEEEecCCCC-c------cCc
Confidence            445778888899888889887753   2689999999999999999999999986  334322111100 0      001


Q ss_pred             ceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139          111 KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus       111 ~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      ...+........+|++||||||+++||+|+.++++.|++.|++.+.+++++++++
T Consensus        85 ~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~  139 (185)
T 2geb_A           85 IVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE  139 (185)
T ss_dssp             CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred             cEEEeccCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCC
Confidence            1111111123478999999999999999999999999999999999999998863

>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0

Probab=99.75  E-value=8.1e-18  Score=129.71  Aligned_cols=123  Identities=12%  Similarity=0.188  Sum_probs=94.4

Q ss_pred             EechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCceeeeeeeee
Q 030139           34 QDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLE  108 (182)
Q Consensus        34 ~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~~~~~~~~~~  108 (182)
                      .|+..++.+++.++...+.|++++.+   .+.++|+|++.||+++|..+|+.+++|+..  ++..+...+         .
T Consensus         6 ~di~~~l~~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~~Y~~~---------~   76 (186)
T 3o7m_A            6 IEIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASSYGNQ---------T   76 (186)
T ss_dssp             CEEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEEECC------------
T ss_pred             ccccEEecCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEEEecCC---------C
Confidence            36777889999999999999987753   268999999999999999999999998633  433221100         0


Q ss_pred             ccceeEEEEc--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139          109 YGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus       109 ~~~~~~~l~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      ...+.+.+..  ....+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus        77 ~~~~~v~i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~  135 (186)
T 3o7m_A           77 ETTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPE  135 (186)
T ss_dssp             ----CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred             cccCcEEEEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence            0111222222  23478999999999999999999999999999999999999999863

>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1

Probab=99.75  E-value=4.1e-18  Score=133.77  Aligned_cols=124  Identities=15%  Similarity=0.200  Sum_probs=92.0

Q ss_pred             EEechhhhcCHHHHHHHHHHHHHHhcC---------CCccEEEeeCCCChhhHHHHHHHh---CCCe--EeeeccCCCCC
Q 030139           33 FQDITTLLLDTKAFRDTIDLFVERYKD---------KNISVVAGIEARGFIFGPPIALAI---GAKF--VPMRKPKKLPG   98 (182)
Q Consensus        33 ~~d~~~l~~~~~~~~~~~~~la~~~~~---------~~~d~Iv~v~~~G~~~a~~la~~l---~vp~--~~~rk~~~~~~   98 (182)
                      |.|+..++.+++.+...+..|++++.+         .+.++|+|++.||+++|..+|+.+   ++|+  ..+++.+...+
T Consensus        20 ~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~i~~~~y~~~   99 (211)
T 1pzm_A           20 YPMSARTLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGSG   99 (211)
T ss_dssp             CTTEEEEEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC-----
T ss_pred             ccccceEEeCHHHHHHHHHHHHHHHHHhcccccccCCCCCEEEEEccchHHHHHHHHHHHhhcCCCceeeeEEeeeccCc
Confidence            346677888999998888888876642         457899999999999999999999   9994  34443221100


Q ss_pred             ceeeeeeeeeccceeEEEEc--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139           99 EVISEEYSLEYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus        99 ~~~~~~~~~~~~~~~~~l~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                       .   ..   .+  .+.+..  ....+|++||||||+++||+|+.++++.|++.|++.+.+++++++++
T Consensus       100 -~---~~---~~--~~~~~~~~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~  159 (211)
T 1pzm_A          100 -V---ET---SG--QVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPS  159 (211)
T ss_dssp             -----------------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred             -c---cc---CC--ceEEeccCCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence             0   00   00  111111  13368999999999999999999999999999999999999999864

>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*

Probab=99.74  E-value=2.2e-17  Score=130.42  Aligned_cols=124  Identities=18%  Similarity=0.192  Sum_probs=90.6

Q ss_pred             echhhhcCHHHHHHHHHHHHHHhcC---CCc-------cEEEeeCCCChhhHHHHHHHh---CCCe--EeeeccCCCCCc
Q 030139           35 DITTLLLDTKAFRDTIDLFVERYKD---KNI-------SVVAGIEARGFIFGPPIALAI---GAKF--VPMRKPKKLPGE   99 (182)
Q Consensus        35 d~~~l~~~~~~~~~~~~~la~~~~~---~~~-------d~Iv~v~~~G~~~a~~la~~l---~vp~--~~~rk~~~~~~~   99 (182)
                      |+..++.+++.++..++.|++.+..   .+.       ++|+|++.||+++|..+|+.+   ++|+  ..++..+...+.
T Consensus         6 di~~~li~~~~i~~~~~~La~~I~~~~~~~~~~~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~l~~~~y~~~~   85 (220)
T 1tc1_A            6 FAEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGL   85 (220)
T ss_dssp             TSCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEECC----
T ss_pred             ccccEeeCHHHHHHHHHHHHHHHHHHccCcccccCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccEEEEeecCCCc
Confidence            4566788898888888888877652   123       899999999999999999999   9995  334322211000


Q ss_pred             eeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139          100 VISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus       100 ~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                            . ..+.-.+........+|++||||||+++||+||.++++.|++.|++.|.+++++.+++
T Consensus        86 ------~-~~~~v~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~  144 (220)
T 1tc1_A           86 ------T-SSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKRE  144 (220)
T ss_dssp             ------------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTT
T ss_pred             ------c-cCCcEEEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence                  0 0011111111123478999999999999999999999999999999999999998864

>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*

Probab=99.73  E-value=1.7e-17  Score=129.52  Aligned_cols=122  Identities=16%  Similarity=0.169  Sum_probs=90.7

Q ss_pred             hhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCe--EeeeccCCCCCceeeeeeeeeccc
Q 030139           37 TTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEYGK  111 (182)
Q Consensus        37 ~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~--~~~rk~~~~~~~~~~~~~~~~~~~  111 (182)
                      ..++.+++.+...+..|++.+.+   .++|+|+|++.||+++|..+|+.+++|+  ..+++.+...+      .. ..+.
T Consensus        33 ~~~l~~~~~i~~~~~~La~~i~~~~~~~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~~y~~~------~~-~~~~  105 (205)
T 1yfz_A           33 EEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSS------TK-SSGI  105 (205)
T ss_dssp             EEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEECSHH------HH-HHCC
T ss_pred             ceEEcCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEEeccCC------cc-ccce
Confidence            34678888898888888887753   2689999999999999999999999996  23332211000      00 0011


Q ss_pred             eeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139          112 DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus       112 ~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      ..+........+|++||||||+++||+|+.++++.|++.|++.|.++++++++.
T Consensus       106 ~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~  159 (205)
T 1yfz_A          106 VKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE  159 (205)
T ss_dssp             EEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred             EEEeccCCCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence            111111123478999999999999999999999999999999999999998863

>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*

Probab=99.73  E-value=7.7e-18  Score=137.70  Aligned_cols=118  Identities=21%  Similarity=0.293  Sum_probs=90.8

Q ss_pred             HHHHHHHhcC-CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEE
Q 030139           50 IDLFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERAL  128 (182)
Q Consensus        50 ~~~la~~~~~-~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~Vl  128 (182)
                      +..|++++.+ .+.++|++++.||+++|..+|+.+++|+.+++|.++.++            ...+.+. +...+||+|+
T Consensus       143 ~~~La~~i~~~~~~~vVv~pd~Gg~~~a~~la~~l~~p~~~i~k~r~~~~------------~~~~~l~-g~~v~Gk~Vl  209 (284)
T 1u9y_A          143 VPKLAEYVKDKLNDPIVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPT------------EIQIAPK-TLDAKDRDVF  209 (284)
T ss_dssp             HHHHHHHHTTTCSSCEEEESSGGGHHHHHHHHHHHTCCEEEBC----------------------CCBS-SCCCTTCCEE
T ss_pred             HHHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHhCCCEEEEEEEEcCCC------------eEEEEec-CccCCCCEEE
Confidence            4455555543 467899999999999999999999999988877653211            0111111 2247899999


Q ss_pred             EEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139          129 IVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL  180 (182)
Q Consensus       129 lVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l  180 (182)
                      ||||++|||+|+.++++.|++.|++.+.++++|+....++.++|.+.++..+
T Consensus       210 IVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~~h~v~s~~a~~~l~~~~i~~v  261 (284)
T 1u9y_A          210 IVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEV  261 (284)
T ss_dssp             EEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEECCCCTTHHHHHHHHTCSEE
T ss_pred             EEecccCchHHHHHHHHHHHHCCCcEEEEEEEeEecCcHHHHHHHhCCCCEE
Confidence            9999999999999999999999999999999999988889999887766554

>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*

Probab=99.72  E-value=2.1e-17  Score=126.32  Aligned_cols=124  Identities=19%  Similarity=0.241  Sum_probs=85.8

Q ss_pred             hhhhcCHHHHHHHHHHHHHHhcC----CCccEEEeeCCCChhhHHHHHHHhC----CC--eEeeeccCC-CCCceeeeee
Q 030139           37 TTLLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIG----AK--FVPMRKPKK-LPGEVISEEY  105 (182)
Q Consensus        37 ~~l~~~~~~~~~~~~~la~~~~~----~~~d~Iv~v~~~G~~~a~~la~~l~----vp--~~~~rk~~~-~~~~~~~~~~  105 (182)
                      ..++.+++.+..+...|++++..    .++|+|+|++.||+++|..+|+.++    +|  +..+++.+. ..+.......
T Consensus         4 ~~~l~~~~~i~~~~~~la~~i~~~~~~~~~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   83 (181)
T 1a3c_A            4 KAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSND   83 (181)
T ss_dssp             EEEEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC--------CC
T ss_pred             ccCccCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEEecCcccccCccc
Confidence            34677888888888888887753    2689999999999999999999997    44  333333221 1111000000


Q ss_pred             eeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcC-CeEEEEEEEEecC
Q 030139          106 SLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP  164 (182)
Q Consensus       106 ~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~g-a~~v~v~~l~~~~  164 (182)
                        ......+.+  ....+|++||||||++|||+|+.++++.|++.| ++.+.+++++++.
T Consensus        84 --~~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~  139 (181)
T 1a3c_A           84 --EPLVKGADI--PVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRG  139 (181)
T ss_dssp             --CCEEEEEEC--SSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred             --eeeeccccc--CcCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccC
Confidence              000011111  234789999999999999999999999999997 9999999999875

>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A

Probab=99.71  E-value=1.2e-16  Score=122.18  Aligned_cols=120  Identities=15%  Similarity=0.203  Sum_probs=88.1

Q ss_pred             hhhcCHHHHHHHHHHHHHHhcC-C--Cc-cEEEeeCCCChhhHHHHHHHhCCCe--EeeeccCCCCCceeeeeeeeeccc
Q 030139           38 TLLLDTKAFRDTIDLFVERYKD-K--NI-SVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEYGK  111 (182)
Q Consensus        38 ~l~~~~~~~~~~~~~la~~~~~-~--~~-d~Iv~v~~~G~~~a~~la~~l~vp~--~~~rk~~~~~~~~~~~~~~~~~~~  111 (182)
                      .++.+++.++...+.|++++.+ .  +. ++|+|++.||+++|..+|+.+++|+  .++++.++..+. .      ..+.
T Consensus         6 ~~l~s~~~i~~~i~~La~~I~~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~~y~~~~-~------~~~~   78 (177)
T 3ohp_A            6 EVMISEQEVAQRIRELGQQITEHYQGSSDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTASSYGNSM-Q------SSRD   78 (177)
T ss_dssp             EEEECHHHHHHHHHHHHHHHHHHTTTCSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEECC---------------CC
T ss_pred             EEeeCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEEEEcCCC-c------cCCc
Confidence            3567888888888888877653 2  34 8999999999999999999999986  334433211100 0      0011


Q ss_pred             eeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          112 DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       112 ~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                      -.+........+|++||||||+++||+|+.++++.|++.|++.+.++++++++
T Consensus        79 v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~  131 (177)
T 3ohp_A           79 VRILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKP  131 (177)
T ss_dssp             CCEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECG
T ss_pred             EEEecCCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECC
Confidence            11111112347899999999999999999999999999999999999999986

>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A

Probab=99.71  E-value=4.2e-17  Score=135.28  Aligned_cols=116  Identities=21%  Similarity=0.170  Sum_probs=89.6

Q ss_pred             HHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEE
Q 030139           51 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIV  130 (182)
Q Consensus        51 ~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllV  130 (182)
                      +.+.+.+.+.+.++||+++.||+.+|..+|+.|++|+.+++|+++.++..           ....+  ....+||+|+||
T Consensus       153 ~~i~~~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~~~~~i~K~r~~~~~v-----------~~~~l--~g~v~gk~viIV  219 (326)
T 3s5j_B          153 KWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKANEV-----------DRMVL--VGDVKDRVAILV  219 (326)
T ss_dssp             HHHHHHCTTGGGCEEEESSGGGHHHHHHHHHHHTCEEEEEEEC------------------CCEEE--ESCCTTSEEEEE
T ss_pred             HHHHHhcCcCCCcEEEEECCCchHHHHHHHHHcCCCEEEEEEEecCCCee-----------eEEec--cccCCCCEEEEE
Confidence            33333443345689999999999999999999999999988876422210           01122  134789999999


Q ss_pred             ecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCccc
Q 030139          131 DDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFV  179 (182)
Q Consensus       131 DDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~  179 (182)
                      ||+++||+|+.++++.|++.|++.+.++++|+....++.++|.+.++..
T Consensus       220 DDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~~~~a~e~l~~~~i~~  268 (326)
T 3s5j_B          220 DDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEA  268 (326)
T ss_dssp             EEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHHHHSCCSE
T ss_pred             ccccCCcHHHHHHHHHHHHcCCCEEEEEEEecccCchHHHHHhhCCCCE
Confidence            9999999999999999999999999999999998888899887655543

>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*

Probab=99.70  E-value=6.3e-17  Score=120.78  Aligned_cols=110  Identities=16%  Similarity=0.235  Sum_probs=85.0

Q ss_pred             hhcCHHHHHHHHHHHHHHhcC-CCccEEEeeCCCChhhHHHHHHHhCCC-eEeeeccCCCCCceeeeeeeeeccceeEEE
Q 030139           39 LLLDTKAFRDTIDLFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAK-FVPMRKPKKLPGEVISEEYSLEYGKDVMEM  116 (182)
Q Consensus        39 l~~~~~~~~~~~~~la~~~~~-~~~d~Iv~v~~~G~~~a~~la~~l~vp-~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l  116 (182)
                      ++.+++.++..+..|++++.+ .++++|+|+++||+++|..+|+.+++| +.+++......           .+.+...+
T Consensus         5 ~l~~~~~i~~~~~~La~~i~~~~~~~~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~y~~-----------~~~~~~~~   73 (152)
T 1nul_A            5 YIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDH-----------DNQRELKV   73 (152)
T ss_dssp             EECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC-------------------CEE
T ss_pred             EecCHHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCCcceEEEEEEecC-----------cccceEEE
Confidence            567889999999999999876 457899999999999999999999999 65554222100           01111222


Q ss_pred             EccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          117 HVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       117 ~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                      ..+...+|++||||||+++||+||.++++.|++     +.+++++++.
T Consensus        74 ~~~~~~~gk~VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~  116 (152)
T 1nul_A           74 LKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKP  116 (152)
T ss_dssp             EECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECG
T ss_pred             ecCCCCCcCEEEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECC
Confidence            223346899999999999999999999999987     7889999986

>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1

Probab=99.69  E-value=1.2e-16  Score=122.22  Aligned_cols=121  Identities=17%  Similarity=0.177  Sum_probs=84.8

Q ss_pred             hhcCHHHHHHHHHHHHHHhcC----CCccEEEeeCCCChhhHHHHHHHhC----CCeE--eeeccCCCCCceeeeeeeee
Q 030139           39 LLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIG----AKFV--PMRKPKKLPGEVISEEYSLE  108 (182)
Q Consensus        39 l~~~~~~~~~~~~~la~~~~~----~~~d~Iv~v~~~G~~~a~~la~~l~----vp~~--~~rk~~~~~~~~~~~~~~~~  108 (182)
                      ++.+++.+......|+.++..    .+.++|+|++.||+++|..+|+.++    +|+.  .+++.+..... ..  ....
T Consensus         6 ~l~~~~~i~~~~~~La~~i~~~~~~~~~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~-~~--~~~~   82 (181)
T 1ufr_A            6 ELMNAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLYRDDL-TE--IGYR   82 (181)
T ss_dssp             EEEEHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC--------------
T ss_pred             eecCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCChHHHHHHHHHHhHHhCCCcccCeEEEEEecCcc-cc--cccc
Confidence            466777778777778776642    3567999999999999999999987    7763  23322110000 00  0000


Q ss_pred             ccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcC-CeEEEEEEEEecC
Q 030139          109 YGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP  164 (182)
Q Consensus       109 ~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~g-a~~v~v~~l~~~~  164 (182)
                      .....+.+  ....+|++||||||++|||+|+.++++.|++.| ++.+.+++++++.
T Consensus        83 ~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~  137 (181)
T 1ufr_A           83 PQVRETRI--PFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRG  137 (181)
T ss_dssp             CEEEEEEE--CSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred             ceeccccc--CcCCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCC
Confidence            00011222  233689999999999999999999999999999 8999999999885

>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1

Probab=99.69  E-value=1.3e-16  Score=124.75  Aligned_cols=121  Identities=25%  Similarity=0.297  Sum_probs=80.6

Q ss_pred             HHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCceeeeeeeeeccceeEEE--------
Q 030139           49 TIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLEYGKDVMEM--------  116 (182)
Q Consensus        49 ~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~~~~~~~~~~~~~~~~~l--------  116 (182)
                      +++.|++.+.+  .+.++|+|+|+||+++|..+|+.+++|+..  .++.+...++-....-..+.+  ...+        
T Consensus         9 a~~~La~~i~~~~~~~~vVv~v~rGg~~~A~~la~~l~~p~~~~~~rk~~~~~~~e~~~ga~s~~g--~~~~~~~~~~~~   86 (208)
T 1wd5_A            9 AGALLAEALAPLGLEAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGG--ELVLMPYALRYA   86 (208)
T ss_dssp             HHHHHHHHHGGGCCCSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEEETTC--CEEECTTHHHHS
T ss_pred             HHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHHhCCCeEEEEEEEecCCCCchhhcceecCCC--cEEechhhhccc
Confidence            34444444432  367899999999999999999999999866  444332110000000000000  0000        


Q ss_pred             --------------------------EccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCccccc
Q 030139          117 --------------------------HVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE  170 (182)
Q Consensus       117 --------------------------~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~  170 (182)
                                                ......+||+||||||++|||+|+.++++.|++.|++.|.+++.+...  ++.+
T Consensus        87 ~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~--~~~~  164 (208)
T 1wd5_A           87 DQSYLEREAARQRDVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASP--EAVE  164 (208)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCH--HHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCH--HHHH
Confidence                                      001247899999999999999999999999999999999999988764  4555


Q ss_pred             ccC
Q 030139          171 RLG  173 (182)
Q Consensus       171 ~l~  173 (182)
                      +|.
T Consensus       165 ~l~  167 (208)
T 1wd5_A          165 RLK  167 (208)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            443

>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}

Probab=99.68  E-value=8.3e-17  Score=133.30  Aligned_cols=108  Identities=20%  Similarity=0.260  Sum_probs=80.9

Q ss_pred             CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHH
Q 030139           60 KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGT  139 (182)
Q Consensus        60 ~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~T  139 (182)
                      .+.++||+++.||+.+|..+|+.|++|+.+++|+++.++..           ..+.+.  ...+||+|+||||+++||+|
T Consensus       165 ~~~~vVVspd~Ggv~~A~~lA~~L~~p~~~i~K~r~~~~~v-----------~~~~i~--g~v~gk~viiVDDii~TG~T  231 (319)
T 3dah_A          165 YPDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVA-----------EVMNII--GEVEGRTCVIMDDMVDTAGT  231 (319)
T ss_dssp             CTTEEEECCSSTTHHHHHHHHHHTTCEEEC---------------------------------CCSEEEEEEEEESSCHH
T ss_pred             CCCcEEEEeCCCccHHHHHHHHHhCCCEEEEEEEeccCCce-----------EEEEcc--ccCCCCEEEEEecccCchHH
Confidence            46689999999999999999999999999888766422110           011221  23789999999999999999


Q ss_pred             HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139          140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL  180 (182)
Q Consensus       140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l  180 (182)
                      +.++++.|++.|+..+.++++|+.+..++.++|.+.++..+
T Consensus       232 l~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~i~~v  272 (319)
T 3dah_A          232 LCKAAQVLKERGAKQVFAYATHPVLSGGAADRIAASALDEL  272 (319)
T ss_dssp             HHHHHHHHHHTTCSCEEEEEEEECCCTTHHHHHHTSSCSEE
T ss_pred             HHHHHHHHHHcCCCEEEEEEEeecCChHHHHHHHhCCCCEE
Confidence            99999999999999999999999988888899887665443

>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*

Probab=99.66  E-value=3.1e-16  Score=129.97  Aligned_cols=106  Identities=21%  Similarity=0.288  Sum_probs=84.0

Q ss_pred             CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHH
Q 030139           60 KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGT  139 (182)
Q Consensus        60 ~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~T  139 (182)
                      ++..+||+++.||+.+|..+|+.+++|+..++|.+....           ....+.+.  ...+||+|+||||++|||+|
T Consensus       166 ~~~~vVv~pd~Gg~~~A~~la~~L~~p~~~l~k~r~~~~-----------~~~~~~l~--~~v~gk~VlLVDDiitTG~T  232 (317)
T 1dku_A          166 LEDIVIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPN-----------VAEVMNIV--GNIEGKTAILIDDIIDTAGT  232 (317)
T ss_dssp             CCSEEEEESSGGGHHHHHHHHHHTTCCEEEEECC--------------------CEEE--SCCTTCEEEEECSEESSCHH
T ss_pred             CCCcEEEEeCcchHHHHHHHHHHhCCCEEEEEEEecccc-----------ceeEEEec--ccCCCCEEEEEecccCCCHH
Confidence            456799999999999999999999999988776543110           01122332  24789999999999999999


Q ss_pred             HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcc
Q 030139          140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLF  178 (182)
Q Consensus       140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~  178 (182)
                      +.++++.|++.|++.|.++++|.....++.+++.+.++.
T Consensus       233 l~~aa~~Lk~~Ga~~V~~~~tH~v~~~~a~~~l~~~~i~  271 (317)
T 1dku_A          233 ITLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIK  271 (317)
T ss_dssp             HHHHHHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSEE
T ss_pred             HHHHHHHHHHcCCcEEEEEEECcccChHHHHHHhhCCCC
Confidence            999999999999999999999998887888887765543

>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*

Probab=99.66  E-value=1.8e-16  Score=134.24  Aligned_cols=127  Identities=14%  Similarity=0.132  Sum_probs=87.1

Q ss_pred             HHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCC------C----ceeeeeeeeeccc--------
Q 030139           50 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP------G----EVISEEYSLEYGK--------  111 (182)
Q Consensus        50 ~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~------~----~~~~~~~~~~~~~--------  111 (182)
                      ++.+.+.+.+.+.++|++++.||+++|..+|+.|++|+.+++|++...      +    +.....+..+++.        
T Consensus       180 a~~I~~~~~~~~~~vVV~pd~GGv~~A~~lA~~L~~pl~ii~k~r~~~~~e~~~gr~~~~~v~~~~~~~~g~~i~~~~~~  259 (379)
T 2ji4_A          180 LQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPK  259 (379)
T ss_dssp             HHHHHHHSTTGGGEEEEESSGGGHHHHHHHHHHTTCEEEEEC--------------------------------------
T ss_pred             HHHHHHhcccCCCcEEEEEccchHHHHHHHHHHhCCCEEEEEEEeecccccccccccCCcccccccccccccchhhhhhh
Confidence            334444443345789999999999999999999999998887655311      0    0000000000000        


Q ss_pred             --eeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcc
Q 030139          112 --DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLF  178 (182)
Q Consensus       112 --~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~  178 (182)
                        ..+.+  ...++||+|+||||+++||+|+.++++.|++.|++.+.++++|+....++.++|.+.++.
T Consensus       260 ~~~~~~l--~g~v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~s~id  326 (379)
T 2ji4_A          260 EKPPITV--VGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAID  326 (379)
T ss_dssp             ---CCCE--ESCCTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEECCCTTHHHHHHHSSCC
T ss_pred             ccccccc--ccCCCCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEEEEEeecCCcHHHHHHHhCCCC
Confidence              00111  134899999999999999999999999999999999999999998887888888755443

>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*

Probab=99.65  E-value=1.1e-15  Score=120.80  Aligned_cols=127  Identities=18%  Similarity=0.191  Sum_probs=89.2

Q ss_pred             hhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCC------CeEeeeccCCCCCceeeeeeeeeccc
Q 030139           38 TLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGA------KFVPMRKPKKLPGEVISEEYSLEYGK  111 (182)
Q Consensus        38 ~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~v------p~~~~rk~~~~~~~~~~~~~~~~~~~  111 (182)
                      .++.+++.++..++.|+..+.+.++++|+|+++||+++|..+|+.|++      |+.+++...+......... ..+.+.
T Consensus         6 ~~~is~~~i~~~i~~LA~~I~~~~~~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s~y~~~~~~~~~-~~~~g~   84 (221)
T 2xbu_A            6 KQYISYNNVHQLCQVSAERIKNFKPDLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNSVGSE-VEEVGV   84 (221)
T ss_dssp             CEECCHHHHHHHHHHHHHHHTTTCCSEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEEEEC--------------C
T ss_pred             eEecCHHHHHHHHHHHHHHhccCCCCEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEEEecCCcccccc-ccccCc
Confidence            467788899999999999996667899999999999999999999998      3444432111000000000 000011


Q ss_pred             eeEE---EE---ccccCCCCeEEEEecccCchHHHHHHHHHHHh--------cCC---------eEEEEEEEEecCC
Q 030139          112 DVME---MH---VGAVQAGERALIVDDLVATGGTLSAAIRLLER--------VGV---------HVVECACVIELPE  165 (182)
Q Consensus       112 ~~~~---l~---~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~--------~ga---------~~v~v~~l~~~~~  165 (182)
                      ..+.   +.   .....+||+||||||+++||.||.+++++|++        .|+         ..+.+++++++..
T Consensus        85 ~~~~~~~~~~~~~~~~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~  161 (221)
T 2xbu_A           85 KVSRTQWIDYEQCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQK  161 (221)
T ss_dssp             EEEEEECCCHHHHTCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECS
T ss_pred             eeeeeeeeecccccccCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccc
Confidence            1110   10   02347899999999999999999999999997        786         5899999999864

>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1

Probab=99.64  E-value=9.4e-16  Score=119.44  Aligned_cols=123  Identities=17%  Similarity=0.196  Sum_probs=86.3

Q ss_pred             hhhhcCHHHHHHHHHHHHHHhcC-----------CCccEEEeeCCCChhhHHHHHHHh----CCCe--EeeeccCCCCCc
Q 030139           37 TTLLLDTKAFRDTIDLFVERYKD-----------KNISVVAGIEARGFIFGPPIALAI----GAKF--VPMRKPKKLPGE   99 (182)
Q Consensus        37 ~~l~~~~~~~~~~~~~la~~~~~-----------~~~d~Iv~v~~~G~~~a~~la~~l----~vp~--~~~rk~~~~~~~   99 (182)
                      ..++.+++.++.....|+..+.+           .+.++|+|++.||+++|..+|+.|    ++|+  ..+.........
T Consensus        13 ~~~l~~~~~i~~~i~~La~~i~~~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~~l~~~~y~~~~   92 (201)
T 1w30_A           13 SRELMSAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDDL   92 (201)
T ss_dssp             EEEEECHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCCGGGCC--
T ss_pred             ceEEeCHHHHHHHHHHHHHHHHHHccccccccccCCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccceEEEEEecCCc
Confidence            34677888888888888876542           256899999999999999999999    5764  233222110000


Q ss_pred             eeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcC-CeEEEEEEEEecC
Q 030139          100 VISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP  164 (182)
Q Consensus       100 ~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~g-a~~v~v~~l~~~~  164 (182)
                          ..........+.+ .....+|++||||||++|||+|+.++++.|++.| ++.+.+++++++.
T Consensus        93 ----~~~~~~~~~~~~~-~~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k~  153 (201)
T 1w30_A           93 ----MIKPPRPLASTSI-PAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG  153 (201)
T ss_dssp             ----------CCCCCBC-CTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred             ----cccccceeecccC-CCccCCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEecC
Confidence                0000000000111 0123789999999999999999999999999999 9999999999984

>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*

Probab=99.61  E-value=4.8e-15  Score=113.69  Aligned_cols=121  Identities=17%  Similarity=0.214  Sum_probs=88.0

Q ss_pred             hhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCceeeeeeeeeccc
Q 030139           37 TTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLEYGK  111 (182)
Q Consensus        37 ~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~~~~~~~~~~~~~  111 (182)
                      ..++.+.+.++...+.||.++.+   .+..+++|+.+||+++|..+++.++.|+..  +.-.+....      .. +.+.
T Consensus        10 ~~vlis~~~I~~~i~rlA~eI~e~~~~~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~ssy~~~------~~-~~g~   82 (181)
T 3acd_A           10 GPVQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYGNA------FK-SSGE   82 (181)
T ss_dssp             SSCCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC------------------
T ss_pred             ccEEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHhcCCCccccceEEEEecCC------cC-CCCc
Confidence            34677888888888888877643   356799999999999999999999988643  221111000      00 0011


Q ss_pred             eeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          112 DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       112 ~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                      ...........+||+||||||+++||.||+++.+.|.+.|++.+.+++++++.
T Consensus        83 ~~~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~  135 (181)
T 3acd_A           83 VELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKP  135 (181)
T ss_dssp             -CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECG
T ss_pred             eEeccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcC
Confidence            11111123458899999999999999999999999999999999999999975

>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*

Probab=99.54  E-value=5.6e-14  Score=122.99  Aligned_cols=115  Identities=19%  Similarity=0.195  Sum_probs=78.9

Q ss_pred             HHHHHHHHHh----cCCCccEEEeeCCCChhhHHHHHHHhCCCeEe-eeccCCCCCceee--eeeeeeccceeEEEEccc
Q 030139           48 DTIDLFVERY----KDKNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEVIS--EEYSLEYGKDVMEMHVGA  120 (182)
Q Consensus        48 ~~~~~la~~~----~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~-~rk~~~~~~~~~~--~~~~~~~~~~~~~l~~~~  120 (182)
                      .+++.|++.+    .+.++|+|+++|.+|+++|..+|+.+++|+.. +.|.+....++..  +..+...-...+... ..
T Consensus       277 ~lg~~La~~i~~~~~~~~~dvVv~vP~~g~~~A~~la~~lg~p~~~~~~k~r~~~~t~i~~~~~~R~~~v~~~~~~~-~~  355 (504)
T 1ecf_A          277 NMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNAN-RA  355 (504)
T ss_dssp             HHHHHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECSCCCCCCCCSSSCCCCCCSTTTEEEC-GG
T ss_pred             HHHHHHHHHHHHHcCCCCCeEEEEECCcHHHHHHHHHHHhCCCceeeEEEecccCCceeCccHHHHHHHHHhhhccc-cc
Confidence            4555555544    33458999999999999999999999999863 3232221111100  000000001123321 23


Q ss_pred             cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEec
Q 030139          121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIEL  163 (182)
Q Consensus       121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~  163 (182)
                      .++||+||||||++|||+|+.++++.|+++||++|++++++..
T Consensus       356 ~v~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~~~  398 (504)
T 1ecf_A          356 EFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPE  398 (504)
T ss_dssp             GTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSCC
T ss_pred             cCCCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEecC
Confidence            4789999999999999999999999999999999999988643

>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*

Probab=99.47  E-value=9.6e-14  Score=120.24  Aligned_cols=114  Identities=18%  Similarity=0.211  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe-eeccCCCCCcee--eeeeeeeccceeEEEEcccc
Q 030139           45 AFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEVI--SEEYSLEYGKDVMEMHVGAV  121 (182)
Q Consensus        45 ~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~-~rk~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~  121 (182)
                      ....+++.|++.+. .+.|+|+++|.+|..+|..+|+.+|+|+.. +.|.+....++.  .+..+.......+... ...
T Consensus       258 ~r~~lg~~La~~~~-~~~DvVV~VP~~g~~~A~~la~~lg~p~~~~l~k~r~~~~~~~~~~~~~R~~~~~~~~~~~-~~~  335 (459)
T 1ao0_A          258 ARKNLGKMLAQESA-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAV-RGV  335 (459)
T ss_dssp             HHHHHHHHHHHHHC-CCCSEEECCTTTTHHHHHHHHHHHCCCBCCCEEECTTCCTTSCCCCHHHHHHTCCSSEEEC-HHH
T ss_pred             HHHHHHHHHHHhcc-cCCcEEEEECCcHHHHHHHHHHHhCCCCceeEEEecCCCccccCCCHHHHHhhhhhhcccc-ccc
Confidence            45567777777664 467999999999999999999999999863 333332111111  1000000011223321 234


Q ss_pred             CCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEE
Q 030139          122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV  160 (182)
Q Consensus       122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l  160 (182)
                      .+||+||||||++|||+|+.++++.|+++||++|.++++
T Consensus       336 v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l  374 (459)
T 1ao0_A          336 VEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKIS  374 (459)
T ss_dssp             HTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred             CCCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEe
Confidence            789999999999999999999999999999999999984

>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*

Probab=99.46  E-value=5.9e-14  Score=111.32  Aligned_cols=111  Identities=7%  Similarity=0.177  Sum_probs=82.9

Q ss_pred             hhhcCHHHHHHHHHHHHHHhcC---C--CccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCceeeeeeeeecc
Q 030139           38 TLLLDTKAFRDTIDLFVERYKD---K--NISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLEYG  110 (182)
Q Consensus        38 ~l~~~~~~~~~~~~~la~~~~~---~--~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~~~~~~~~~~~~  110 (182)
                      .++.+++.+...++.||+++.+   .  +.++|+|+++||+++|..+|+.+++|+..  ++..+          |..+..
T Consensus        33 ~vlis~~~I~~~i~~LA~~I~~~~~~~~~~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs~----------y~~~~s  102 (230)
T 1dqn_A           33 HLLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVSS----------YKGTRQ  102 (230)
T ss_dssp             EEEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCEE----------EECSSC
T ss_pred             cEecCHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEEE----------eCCCcc
Confidence            4677888888888888877752   2  67899999999999999999999999743  22211          110000


Q ss_pred             ceeEEE-Ec--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          111 KDVMEM-HV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       111 ~~~~~l-~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                      .+ ..+ ..  ....+||+||||||+++||.||.++++.|++     +.++++++++
T Consensus       103 ~~-v~i~~~~l~~~v~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~  153 (230)
T 1dqn_A          103 ES-VVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKD  153 (230)
T ss_dssp             EE-EECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESC
T ss_pred             Cc-eEEEeccCccCCCCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECC
Confidence            01 222 11  1237899999999999999999999999988     7888899886

>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1

Probab=99.16  E-value=1.1e-10  Score=91.27  Aligned_cols=101  Identities=25%  Similarity=0.258  Sum_probs=72.8

Q ss_pred             CccEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeecccee-EEEEccccCCCCeEEEEecccCchH
Q 030139           61 NISVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDV-MEMHVGAVQAGERALIVDDLVATGG  138 (182)
Q Consensus        61 ~~d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~gk~VllVDDvitTG~  138 (182)
                      +..++|++.++|++++..+.+.+. .++..+.+.+..           +..+.. ++.......+|++|+||||+++||+
T Consensus        70 ~~~~vV~Ilr~G~~~~~~L~~~l~~~~~~~i~~~r~~-----------~t~~~~~~~~~lp~~i~~~~VllvDd~l~TG~  138 (209)
T 1i5e_A           70 KKLGVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDP-----------QTLKPVEYYVKLPSDVEERDFIIVDPMLATGG  138 (209)
T ss_dssp             CCEEEEEBTTGGGGGHHHHHHHCTTSEECEEEEECCT-----------TCSSCEEEEEECCTTTTTSEEEEECSEESSSH
T ss_pred             CceEEEEEecCChHHHHHHHHhCCCCeEEEEEEEEcC-----------CCCceEEEEEcCCCccCCCEEEEEcCCCcCHH
Confidence            345899999999999999999883 444333322211           011111 1222233578999999999999999


Q ss_pred             HHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC
Q 030139          139 TLSAAIRLLERVGVHVVECACVIELPELKGRERLGE  174 (182)
Q Consensus       139 Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~  174 (182)
                      |+.++++.|++.|++.+.+++++..+  .+.+++.+
T Consensus       139 T~~~a~~~L~~~G~~~I~~~~lv~~~--~g~~~l~~  172 (209)
T 1i5e_A          139 SAVAAIDALKKRGAKSIKFMCLIAAP--EGVKAVET  172 (209)
T ss_dssp             HHHHHHHHHHHTTCCCEEEECSEECH--HHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCEEEEEEEEECH--HHHHHHHH
Confidence            99999999999999999999887764  56666653

>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1

Probab=99.11  E-value=1.5e-10  Score=91.19  Aligned_cols=100  Identities=19%  Similarity=0.237  Sum_probs=73.7

Q ss_pred             ccEEEeeCCCChhhHHHHHHHh-CCCeEeeeccCCCCCceeeeeeeeeccceeE-EEEccccCCCCeEEEEecccCchHH
Q 030139           62 ISVVAGIEARGFIFGPPIALAI-GAKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGT  139 (182)
Q Consensus        62 ~d~Iv~v~~~G~~~a~~la~~l-~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VllVDDvitTG~T  139 (182)
                      .-++|++.++|+.++..+++.+ +.++..+...+...           .++... +.......+|++|+||||+++||+|
T Consensus        83 ~lviV~IlrgG~~~~~~l~~~lp~a~vg~I~~~Rd~~-----------t~~~~~~~~~lp~di~gr~VilvDd~laTG~T  151 (221)
T 1o5o_A           83 DIVVVPILRAGLVMADGILELLPNASVGHIGIYRDPE-----------TLQAVEYYAKLPPLNDDKEVFLLDPMLATGVS  151 (221)
T ss_dssp             TEEEEEEETTHHHHHHHHHHHSTTCEECEEEEEECTT-----------TCCEEEEEEECCCCCTTCEEEEECSEESSSHH
T ss_pred             eEEEEEEecchHHHHHHHHHhCCCCcEEEEEEEEcCC-----------CCceeEEEecCCCccCCCEEEEECCccccHHH
Confidence            3488999999999999999998 45554443332110           111111 2222345789999999999999999


Q ss_pred             HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC
Q 030139          140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGE  174 (182)
Q Consensus       140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~  174 (182)
                      +.++++.|++.|++.+.+++++..+  .+.+++.+
T Consensus       152 l~~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~~  184 (221)
T 1o5o_A          152 SIKAIEILKENGAKKITLVALIAAP--EGVEAVEK  184 (221)
T ss_dssp             HHHHHHHHHHTTCCEEEEECSEECH--HHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHHH
Confidence            9999999999999999999988765  56766654

>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}

Probab=99.00  E-value=1.8e-09  Score=84.27  Aligned_cols=99  Identities=24%  Similarity=0.259  Sum_probs=71.4

Q ss_pred             ccEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeE-EEEccccCCCCeEEEEecccCchHH
Q 030139           62 ISVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGT  139 (182)
Q Consensus        62 ~d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VllVDDvitTG~T  139 (182)
                      .-++||+.++|+.++..+.+.+. .++..+...+. +          +.++... +.... ..+|++|+||||+++||+|
T Consensus        69 ~~~~V~ILraG~~~~~~l~~~lp~~~vg~i~~~rd-~----------~t~~~~~~~~~lp-di~~r~vilvDd~laTG~T  136 (208)
T 2e55_A           69 EIVFVPILRAGLSFLEGALQVVPNAKVGFLGIKRN-E----------ETLESHIYYSRLP-ELKGKIVVILDPMLATGGT  136 (208)
T ss_dssp             GEEEEEEETTTHHHHHHHHHHSTTCEECEEEEEEC-T----------TTCCEEEEEEECC-CCBTSEEEEECSEESSSHH
T ss_pred             cEEEEEEecchHHHHHHHHHhCCCCcEEEEEEEEe-c----------CCCceEEEecCCC-CCCCCEEEEECCccccHHH
Confidence            34889999999999999999885 12211211110 0          0111222 22224 5789999999999999999


Q ss_pred             HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC
Q 030139          140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGE  174 (182)
Q Consensus       140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~  174 (182)
                      +.++++.|++.|++.+.+++++..+  .+.+++.+
T Consensus       137 ~~~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~~  169 (208)
T 2e55_A          137 LEVALREILKHSPLKVKSVHAIAAP--EGLKRIEE  169 (208)
T ss_dssp             HHHHHHHHHTTCBSEEEEEEEEECH--HHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEEEEEECH--HHHHHHHH
Confidence            9999999999999999999998865  56766653

>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}

Probab=99.00  E-value=2.3e-09  Score=83.65  Aligned_cols=100  Identities=23%  Similarity=0.254  Sum_probs=71.3

Q ss_pred             ccEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeE-EEEccccCCCCeEEEEecccCchHH
Q 030139           62 ISVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGT  139 (182)
Q Consensus        62 ~d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VllVDDvitTG~T  139 (182)
                      .-++||+.++|+.++..+.+.+. .++..+...+..           +.++... +.......+|++|+||||++.||+|
T Consensus        70 ~l~~V~ILraG~~~~~~l~~~ip~~~vg~i~~~rd~-----------~t~~~~~~~~~lp~di~~r~VilvDd~laTG~T  138 (208)
T 2ehj_A           70 KITVVPILRAGLGMMDGVLENVPSARISVVGMYRNE-----------ETLEPVPYFQKLVSNIDERMALIVDPMLATGGS  138 (208)
T ss_dssp             CCEEEEBTTGGGGGHHHHHHHCTTCEECEEEEEECT-----------TTCCEEEEEEECCSCGGGCEEEEEEEEESSCHH
T ss_pred             ceEEEEeecCHHHHHHHHHHhCCcCceeEEEEEEcC-----------CCCceEEEecCCCCccCCCEEEEECCccccHHH
Confidence            34899999999999999999885 122112111100           0111122 1222345789999999999999999


Q ss_pred             HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC
Q 030139          140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGE  174 (182)
Q Consensus       140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~  174 (182)
                      +.++++.|++.|++.+.+++++..+  .+.+++.+
T Consensus       139 ~~~ai~~L~~~G~~~I~~~~lv~~p--~g~~~l~~  171 (208)
T 2ehj_A          139 VIATIDLLKKAGCSSIKVLVLVAAP--EGIAALEK  171 (208)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEEEECH--HHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHHH
Confidence            9999999999999999999998875  56666553

>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1

Probab=98.91  E-value=1.6e-09  Score=84.46  Aligned_cols=100  Identities=25%  Similarity=0.348  Sum_probs=70.0

Q ss_pred             ccEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeE-EEEccccCCCCeEEEEecccCchHH
Q 030139           62 ISVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGT  139 (182)
Q Consensus        62 ~d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VllVDDvitTG~T  139 (182)
                      .-++||+.++|+.++..+.+.+. .++..+.-.+. +          +.++... +.......+|++|+||||++.||+|
T Consensus        70 ~l~~V~ILraG~~~~~~l~~~ip~~~vg~I~~~rd-~----------~t~~~~~~~~~lp~di~~r~vilvDd~laTG~T  138 (208)
T 1v9s_A           70 KLALVAILRAGLVMVEGILKLVPHARVGHIGLYRD-P----------ESLNPVQYYIKLPPDIAERRAFLLDPMLATGGS  138 (208)
T ss_dssp             CCEEEEETTTHHHHHHHHHTTCTTCEEEEEEEC--------------------CEEEECCSCGGGSCEEEECSEESSSHH
T ss_pred             ceEEEEeccchHHHHHHHHHhCCCCeeeEEEEEEc-C----------CCCCceEEeccCCCccCCCEEEEECCccccHHH
Confidence            34899999999999999998875 22222221111 0          0111111 2222345789999999999999999


Q ss_pred             HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC
Q 030139          140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGE  174 (182)
Q Consensus       140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~  174 (182)
                      +.++++.|++.|++.+.+++++..+  .+.+++.+
T Consensus       139 ~~~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~~  171 (208)
T 1v9s_A          139 ASLALSLLKERGATGVKLMAILAAP--EGLERIAK  171 (208)
T ss_dssp             HHHHHHHHHHTTCCSCEEEEEEECH--HHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHHH
Confidence            9999999999999999999998765  56666653

>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*

Probab=98.87  E-value=6.1e-09  Score=83.00  Aligned_cols=99  Identities=17%  Similarity=0.208  Sum_probs=70.3

Q ss_pred             cEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeE-EEEccccCCCCeEEEEecccCchHHH
Q 030139           63 SVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGTL  140 (182)
Q Consensus        63 d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VllVDDvitTG~Tl  140 (182)
                      -++|++.++|+.++..+.+.+. .++..+.-.+.           .+.++..+ +.......+|++|+||||++.||+|+
T Consensus       104 l~~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~Rd-----------~~t~~~~~~~~~lp~di~~r~VilvDdmlaTG~T~  172 (243)
T 1bd3_D          104 ICGVSIVRAGESMESGLRAVCRGVRIGKILIQRD-----------ETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSV  172 (243)
T ss_dssp             EEEEEEETTTHHHHHHHHHHSTTCCEEEEEEEEC-----------SSSCCEEEEEEECCTTGGGSEEEEECSEESSCHHH
T ss_pred             EEEEEEEcchHHHHHHHHHhCCcCeeeeEEEEEc-----------CCCCCeEEEeccCCcccCCCEEEEECCccccHHHH
Confidence            3788899999999999999885 23322211110           00111122 22223457899999999999999999


Q ss_pred             HHHHHHHHhcCC--eEEEEEEEEecCCcccccccCC
Q 030139          141 SAAIRLLERVGV--HVVECACVIELPELKGRERLGE  174 (182)
Q Consensus       141 ~~~~~~L~~~ga--~~v~v~~l~~~~~~~~~~~l~~  174 (182)
                      .++++.|++.|+  +.+.+++++..+  .+.+++.+
T Consensus       173 ~~ai~~L~~~G~~p~~I~~~~lvaap--~g~~~l~~  206 (243)
T 1bd3_D          173 CKAIEVLLRLGVKEERIIFVNILAAP--QGIERVFK  206 (243)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEEEEECH--HHHHHHHH
T ss_pred             HHHHHHHHHcCCCcceEEEEEEEeCH--HHHHHHHH
Confidence            999999999999  889999998765  56666553

>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1

Probab=98.69  E-value=2.8e-08  Score=77.88  Aligned_cols=97  Identities=16%  Similarity=0.158  Sum_probs=68.6

Q ss_pred             cEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHH
Q 030139           63 SVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLS  141 (182)
Q Consensus        63 d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~  141 (182)
                      -++|++.++|.+++..+.+.+. .++..+...+.. ..          +....+...+ ...|+.|+||||++.||+|+.
T Consensus        79 i~~V~IlRaG~~m~~~l~~~ip~a~vg~i~~~Rd~-~t----------~p~~~~~~lP-~i~~~~VilvD~~laTG~T~~  146 (217)
T 3dmp_A           79 LAIVPVLRAGVGMSDGLLELIPSARVGHIGVYRAD-DH----------RPVEYLVRLP-DLEDRIFILCDPMVATGYSAA  146 (217)
T ss_dssp             EEEEEEETTTHHHHHHHHHHCTTSEECEEECSCCC-SS----------SCCCSEEECC-CCTTCEEEEECSEESSSHHHH
T ss_pred             EEEEEecccchHHHHHHHHhCcCCceeEEEEEECC-CC----------CcEEEeecCC-CCCCCEEEEEcCcccccHHHH
Confidence            4788899999999999999884 343332221110 00          0001111224 578999999999999999999


Q ss_pred             HHHHHHHhcCC--eEEEEEEEEecCCcccccccC
Q 030139          142 AAIRLLERVGV--HVVECACVIELPELKGRERLG  173 (182)
Q Consensus       142 ~~~~~L~~~ga--~~v~v~~l~~~~~~~~~~~l~  173 (182)
                      ++++.|++.|+  +.+.++|++..+  .|.+++.
T Consensus       147 ~ai~~L~~~G~pe~~I~~~~~vaa~--egl~~l~  178 (217)
T 3dmp_A          147 HAIDVLKRRGVPGERLMFLALVAAP--EGVQVFQ  178 (217)
T ss_dssp             HHHHHHHTTTCCGGGEEEECSEECH--HHHHHHH
T ss_pred             HHHHHHHHcCCCcCeEEEEEEEeCH--HHHHHHH
Confidence            99999999999  888888887754  5666554

>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*

Probab=98.50  E-value=3.7e-07  Score=71.47  Aligned_cols=100  Identities=12%  Similarity=0.055  Sum_probs=66.8

Q ss_pred             cEEEeeCCCChhhHHHHHHHhC-CCeEee---eccCCCCCceeeeeeeeeccceeE-EEEccccCCCC--eEEEEecccC
Q 030139           63 SVVAGIEARGFIFGPPIALAIG-AKFVPM---RKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGE--RALIVDDLVA  135 (182)
Q Consensus        63 d~Iv~v~~~G~~~a~~la~~l~-vp~~~~---rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk--~VllVDDvit  135 (182)
                      -++|++.++|.+++..+.+.+. .+...+   |...+....    .   ...+... +.+.. ...++  +|+||||++.
T Consensus        73 i~iV~IlRaG~~m~~gl~~~lp~a~vg~I~~~Rd~~t~~~~----~---~~~~p~~~y~klP-~i~~~~~~VilvDp~la  144 (216)
T 1xtt_A           73 IVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKEV----P---KDMDVYIYYKKIP-DIRAKVDNVIIADPMIA  144 (216)
T ss_dssp             EEEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECCCCCSSC----C---SCCCEEEEEEECC-CCCTTTCEEEEECSEES
T ss_pred             EEEEeecCCcHHHHHHHHHHcccCccceEEEEECCCccccc----c---cccCceEeeccCC-CccCCcceEEEEcCCcc
Confidence            4788899999999999999874 233221   111110000    0   0001111 22223 57788  9999999999


Q ss_pred             chHHHHHHHHHHHhcCC-eEEEEEEEEecCCcccccccC
Q 030139          136 TGGTLSAAIRLLERVGV-HVVECACVIELPELKGRERLG  173 (182)
Q Consensus       136 TG~Tl~~~~~~L~~~ga-~~v~v~~l~~~~~~~~~~~l~  173 (182)
                      ||+|+.++++.|++ |+ +.+.+++++.-+  .|.+++.
T Consensus       145 TG~T~~~ai~~L~~-G~p~~I~~~~~vaa~--~gl~~l~  180 (216)
T 1xtt_A          145 TASTMLKVLEEVVK-ANPKRIYIVSIISSE--YGVNKIL  180 (216)
T ss_dssp             SSHHHHHHHHHHGG-GCCSEEEEECSEEEH--HHHHHHH
T ss_pred             chHHHHHHHHHHHh-CCCCeEEEEEEecCH--HHHHHHH
Confidence            99999999999999 99 888888887654  5666654

>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}

Probab=87.42  E-value=4.8  Score=32.77  Aligned_cols=75  Identities=9%  Similarity=0.120  Sum_probs=48.0

Q ss_pred             CCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCch----HHHHHHH
Q 030139           69 EARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATG----GTLSAAI  144 (182)
Q Consensus        69 ~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG----~Tl~~~~  144 (182)
                      -++.-.+|..+|+.||+|+..+...+...            |+.  .+.....++|++|+||-.....-    --+.-++
T Consensus        13 g~~~~~La~~ia~~lg~~l~~~~~~~F~d------------GE~--~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~i   78 (319)
T 3dah_A           13 GNANPALAQEVVKILGIPLGKAMVSRFSD------------GEI--QVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMV   78 (319)
T ss_dssp             CSSCHHHHHHHHHHHTSCCCCEEEEECTT------------SCE--EEEECSCCBTCEEEEECCCCSSHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhCCceeeeEEEECCC------------CCE--EEEECCCcCCCeEEEEccCCCCCcHHHHHHHHHH
Confidence            34456899999999999886543222111            222  22223458899999997654321    1255667


Q ss_pred             HHHHhcCCeEEEE
Q 030139          145 RLLERVGVHVVEC  157 (182)
Q Consensus       145 ~~L~~~ga~~v~v  157 (182)
                      ++++.++|+.+.+
T Consensus        79 dA~k~asA~rIt~   91 (319)
T 3dah_A           79 DALKRASAGRITA   91 (319)
T ss_dssp             HHHHHTTBSEEEE
T ss_pred             HHHHHcCCcEEEE
Confidence            8888999987654

>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*

Probab=84.98  E-value=5  Score=31.93  Aligned_cols=73  Identities=10%  Similarity=0.083  Sum_probs=46.8

Q ss_pred             CChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc-hH--HHHHHHHHH
Q 030139           71 RGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GG--TLSAAIRLL  147 (182)
Q Consensus        71 ~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT-G~--Tl~~~~~~L  147 (182)
                      +.-.+|..+|+.||+|+..+...+...            |+  .++.....++|++|+|+-..... -.  -+.-+++++
T Consensus         8 ~~~~la~~ia~~l~~~l~~~~~~~F~d------------GE--~~v~i~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~   73 (284)
T 1u9y_A            8 QSQNLAFKVAKLLNTKLTRVEYKRFPD------------NE--IYVRIVDEINDDEAVIINTQKNQNDAIVETILLCDAL   73 (284)
T ss_dssp             TCHHHHHHHHHHTTCCEECEEEEECTT------------CC--EEEEECSCCCSSEEEEECCCSSHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCeeeeeEEEECCC------------CC--EEEEeCCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHH
Confidence            345899999999999987654332211            22  22222345789999999876542 12  244556788


Q ss_pred             HhcCCeEEEE
Q 030139          148 ERVGVHVVEC  157 (182)
Q Consensus       148 ~~~ga~~v~v  157 (182)
                      +.++|+.+.+
T Consensus        74 ~~~~a~~i~~   83 (284)
T 1u9y_A           74 RDEGVKKITL   83 (284)
T ss_dssp             HTTTCCEEEE
T ss_pred             HHcCCceEEE
Confidence            8899987554

>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A

Probab=84.03  E-value=9.9  Score=30.99  Aligned_cols=74  Identities=16%  Similarity=0.110  Sum_probs=46.0

Q ss_pred             CCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc--hH--HHHHHHH
Q 030139           70 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT--GG--TLSAAIR  145 (182)
Q Consensus        70 ~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT--G~--Tl~~~~~  145 (182)
                      ++.-.+|..+|+.||+|+..+...+...            |+.  ++.....++|++|+||-.....  -.  -+.-+++
T Consensus        10 ~~~~~La~~ia~~lg~~l~~~~~~~F~d------------GE~--~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~id   75 (326)
T 3s5j_B           10 SSHQDLSQKIADRLGLELGKVVTKKFSN------------QET--CVEIGESVRGEDVYIVQSGCGEINDNLMELLIMIN   75 (326)
T ss_dssp             SSCCHHHHHHHHHTTCCCCCEEEEECTT------------SCE--EEEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhCCceeeeEEeECCC------------CCE--EEEECCCcCCCcEEEEecCCCCccHHHHHHHHHHH
Confidence            3445899999999999886543222111            222  2222445889999999764332  11  2335567


Q ss_pred             HHHhcCCeEEEE
Q 030139          146 LLERVGVHVVEC  157 (182)
Q Consensus       146 ~L~~~ga~~v~v  157 (182)
                      +++.++|+.+.+
T Consensus        76 A~k~asA~rIt~   87 (326)
T 3s5j_B           76 ACKIASASRVTA   87 (326)
T ss_dssp             HHHHTTCSEEEE
T ss_pred             HHHhcCCcEEEE
Confidence            788899987654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	182
d1zn7a1	178	c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sap	4e-54
d1l1qa_	181	c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [Tax	1e-50
d1g2qa_	178	c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Sacch	5e-49
d1qb7a_	236	c.61.1.1 (A:) Adenine PRTase {Leishmania donovani	8e-44
d1o57a2	202	c.61.1.1 (A:75-276) Pur operon repressor (PurR), C	2e-38
d1vcha1	174	c.61.1.1 (A:2-175) Putative phosphoribosyltransfer	1e-34
d1y0ba1	191	c.61.1.1 (A:1-191) Xanthine phosphoribosyltransfer	3e-34
d1vdma1	153	c.61.1.1 (A:1-153) Pprobable purine phosphoribosyl	3e-08
d1nula_	150	c.61.1.1 (A:) Xanthine-guanine PRTase (XPRTase) {E	5e-07
d1j7ja_	172	c.61.1.1 (A:) Hypoxanthine PRTase {Salmonella typh	4e-04
d1a3ca_	178	c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Ba	0.001

>d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]} Length = 178

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (425), Expect = 4e-54
 Identities = 76/176 (43%), Positives = 109/176 (61%), Gaps = 3/176 (1%)

Query: 10  DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVA 66
           D  +  +   IR  PDFP PG++F+DI+ +L D  +FR  I L     K      I  +A
Sbjct: 1   DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIA 60

Query: 67  GIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGER 126
           G+++RGF+FGP +A  +G   V +RK  KLPG  +   YSLEYGK  +E+   A++ G+R
Sbjct: 61  GLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQR 120

Query: 127 ALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 182
            ++VDDL+ATGGT++AA  LL R+   V+EC  ++EL  LKGRE+L   P F L+ 
Sbjct: 121 VVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQ 176

>d1l1qa_ c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [TaxId: 5741]} Length = 181

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Giardia lamblia [TaxId: 5741]

 Score =  159 bits (402), Expect = 1e-50
 Identities = 67/174 (38%), Positives = 98/174 (56%), Gaps = 5/174 (2%)

Query: 13  IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARG 72
           +A   + I+ IPDFP  GI F+D++ +L    A           YKD  I+ V GIE+RG
Sbjct: 4   VADAHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRG 63

Query: 73  FIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDV-MEMHVGAVQAGERALIVD 131
           FI G  +A ++G  FV +RK  KLPG+V    + +EY K V +E+    +   +  L+ D
Sbjct: 64  FILGGIVANSLGVGFVALRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHD 123

Query: 132 DLVATGGTLSAAIRLLERVG--VHVVECACVIELPELKGRERLGEK--PLFVLV 181
           D++ATGGTL AAI L E  G     +    + E+  LKGRE++G+K   LF ++
Sbjct: 124 DVLATGGTLLAAIELCETAGVKPENIYINVLYEIEALKGREKVGQKCTRLFSVI 177

>d1g2qa_ c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 178

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  154 bits (391), Expect = 5e-49
 Identities = 68/170 (40%), Positives = 103/170 (60%), Gaps = 5/170 (2%)

Query: 16  ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVE----RYKDKNISVVAGIEAR 71
           +  A+   P+FP  GI+F+D   +  +   F+  ID F       + +  I  + G+E+R
Sbjct: 10  LKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESR 69

Query: 72  GFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVD 131
           GF+FGP +ALA+G  FVP+RK  KLPGE     Y  EYG D+ E+   A+ AG   +IVD
Sbjct: 70  GFLFGPTLALALGVGFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVD 129

Query: 132 DLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 181
           D++ATGG+ +AA  L+E++  +++E   V+EL  LKGR +L   P+F L+
Sbjct: 130 DIIATGGSAAAAGELVEQLEANLLEYNFVMELDFLKGRSKL-NAPVFTLL 178

>d1qb7a_ c.61.1.1 (A:) Adenine PRTase {Leishmania donovani [TaxId: 5661]} Length = 236

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Leishmania donovani [TaxId: 5661]

 Score =  143 bits (362), Expect = 8e-44
 Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 16  ISSAIR-VIPDF-PKPGIMFQDITTLLLDTKAFRDTIDLFVERYK--DKNISVVAGIEAR 71
           +  + R   P F P+    F D++++    +  +   D  V+RY+      + + G +AR
Sbjct: 22  LKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDAR 81

Query: 72  GFIFGPPIALAIGAKFVPMRKPKKLPGEVI-SEEYSLEY---GKDVMEMHVGAVQAGERA 127
           GF+FGP IA+ +   FV MRK  K  G +I SE Y  EY     +VM +  G++  G R 
Sbjct: 82  GFLFGPMIAVELEIPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRV 141

Query: 128 LIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFV 179
           +++DD++ATGGT  + ++L+E     VVE   ++ +P LK  E++       
Sbjct: 142 VLIDDVLATGGTALSGLQLVEASDAVVVEMVSILSIPFLKAAEKIHSTANSR 193

>d1o57a2 c.61.1.1 (A:75-276) Pur operon repressor (PurR), C-terminal domain {Bacillus subtilis [TaxId: 1423]} Length = 202

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pur operon repressor (PurR), C-terminal domain
species: Bacillus subtilis [TaxId: 1423]

 Score =  128 bits (323), Expect = 2e-38
 Identities = 36/161 (22%), Positives = 62/161 (38%), Gaps = 4/161 (2%)

Query: 24  PDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAI 83
           P+   PG  +  +T +L           LF   + ++ I VV  +  +G       A  +
Sbjct: 20  PERILPGG-YVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYL 78

Query: 84  GAKFVPMRKPKKLP-GEVISEEYSLEYGK--DVMEMHVGAVQAGERALIVDDLVATGGTL 140
               V +RK  K+  G  +S  Y          M +   +++ G   LI+DD +  GGT+
Sbjct: 79  NVPVVIVRKDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTI 138

Query: 141 SAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 181
           +  I LL+    +V     ++E   +  R       L  L 
Sbjct: 139 NGMINLLDEFNANVAGIGVLVEAEGVDERLVDEYMSLLTLS 179

>d1vcha1 c.61.1.1 (A:2-175) Putative phosphoribosyltransferase TTHA1613 {Thermus thermophilus [TaxId: 274]} Length = 174

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Putative phosphoribosyltransferase TTHA1613
species: Thermus thermophilus [TaxId: 274]

 Score =  118 bits (296), Expect = 1e-34
 Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 7/169 (4%)

Query: 16  ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIF 75
           +    R +P           +   L D +  R   +        K   ++   E      
Sbjct: 7   VGGVTRHVPLIEPLPGRRIPLVEFLGDPEFTRAAAEALRPLV-PKEAEILFTTETSPIPL 65

Query: 76  GPPIALAIGAKFVPMRKPKKLPGE--VISEEYSLEYGKD---VMEMHVGAVQAGERALIV 130
              +A A+G  +V  R+ ++   E  +I E  +L  G      ++         +R ++V
Sbjct: 66  THVLAEALGLPYVVARRRRRPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLV 125

Query: 131 DDLVATGGTLSAAIRLLERVGVHVVECACVIELPELK-GRERLGEKPLF 178
            D+VA+G T+ A  +++ R G HVV    V          + + E P+ 
Sbjct: 126 SDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTPGLAVDTVAELPVL 174

>d1y0ba1 c.61.1.1 (A:1-191) Xanthine phosphoribosyltransferase {Bacillus subtilis [TaxId: 1423]} Length = 191

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Xanthine phosphoribosyltransferase
species: Bacillus subtilis [TaxId: 1423]

 Score =  117 bits (294), Expect = 3e-34
 Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 7/170 (4%)

Query: 20  IRVIPDFPKPGIMF-QDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPP 78
           I          ++         +D    +   D F  R+    I+ +  IE+ G      
Sbjct: 8   IEEEGVVLSDQVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVM 67

Query: 79  IALAIGAKFVPMRKPKKLPGE----VISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLV 134
             L +G   V  RK K L         S     +  +  + +    +   +  LI+DD +
Sbjct: 68  TGLKLGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFL 127

Query: 135 ATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK--PLFVLVS 182
           A G      + ++++ G  +     VIE     GR+ L +    +  L  
Sbjct: 128 ANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRVESLAR 177

>d1vdma1 c.61.1.1 (A:1-153) Pprobable purine phosphoribosyltransferase PH0095 {Pyrococcus horikoshii [TaxId: 53953]} Length = 153

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pprobable purine phosphoribosyltransferase PH0095
species: Pyrococcus horikoshii [TaxId: 53953]

 Score = 48.3 bits (114), Expect = 3e-08
 Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 6/127 (4%)

Query: 39  LLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPG 98
           + L        I    E+ ++    V+ G+   G I    ++  +G   + +   K    
Sbjct: 4   VYLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVK---- 59

Query: 99  EVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECA 158
               +       K V+ + +      +R +IVDD+  TG TL   I  ++++G   ++ A
Sbjct: 60  --FYKGIDERGEKPVITIPIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIA 117

Query: 159 CVIELPE 165
           C+   P 
Sbjct: 118 CLAMKPW 124

>d1nula_ c.61.1.1 (A:) Xanthine-guanine PRTase (XPRTase) {Escherichia coli [TaxId: 562]} Length = 150

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Xanthine-guanine PRTase (XPRTase)
species: Escherichia coli [TaxId: 562]

 Score = 45.0 bits (106), Expect = 5e-07
 Identities = 18/109 (16%), Positives = 37/109 (33%), Gaps = 10/109 (9%)

Query: 47  RDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYS 106
                L       +    +  +   G + G  +A  +G + V          + +     
Sbjct: 12  IHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHV----------DTVCISSY 61

Query: 107 LEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155
               +  +++   A   GE  +++DDLV TGGT  A   +  +     +
Sbjct: 62  DHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTI 110

>d1j7ja_ c.61.1.1 (A:) Hypoxanthine PRTase {Salmonella typhimurium [TaxId: 90371]} Length = 172

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine PRTase
species: Salmonella typhimurium [TaxId: 90371]

 Score = 37.2 bits (86), Expect = 4e-04
 Identities = 25/127 (19%), Positives = 44/127 (34%), Gaps = 9/127 (7%)

Query: 54  VERYKDKNISVV-AGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKD 112
            ERYKD    +V  G+    F+F     +A   + V +                      
Sbjct: 24  TERYKDSGSEMVLVGLLRGSFMF-----MADLCREVQVPHEVDFMTASSYGSGMSTTRDV 78

Query: 113 VMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 172
            +   +     G+  LIV+D++ +G TLS    +L       +    +++ P    R  +
Sbjct: 79  KILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILGLREPKSLAICTLLDKP---SRREV 135

Query: 173 GEKPLFV 179
                FV
Sbjct: 136 DVPVEFV 142

>d1a3ca_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Bacillus subtilis [TaxId: 1423]} Length = 178

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pyrimidine operon regulator PyrR
species: Bacillus subtilis [TaxId: 1423]

 Score = 35.8 bits (82), Expect = 0.001
 Identities = 29/150 (19%), Positives = 62/150 (41%), Gaps = 12/150 (8%)

Query: 38  TLLLDTKAFRDTIDLF----VERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKP 93
            ++LD +A R  +       +ER K  N  ++ GI+ RG      +A  I          
Sbjct: 3   AVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTV 62

Query: 94  KKLPGEVISEEYSLEY---GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERV 150
            ++   +  ++ S +       V    +      ++ ++VDD++ TG T+ A +  L  V
Sbjct: 63  GEIDITLYRDDLSKKTSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDV 122

Query: 151 G-VHVVECACVIELPELKGRERLGEKPLFV 179
           G    ++ A +++    +G   L  +  ++
Sbjct: 123 GRPSSIQLAVLVD----RGHRELPIRADYI 148

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	182
d1zn7a1	178	Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]	100.0
d1g2qa_	178	Adenine PRTase {Baker's yeast (Saccharomyces cerev	100.0
d1l1qa_	181	Adenine PRTase {Giardia lamblia [TaxId: 5741]}	100.0
d1qb7a_	236	Adenine PRTase {Leishmania donovani [TaxId: 5661]}	99.97
d1o57a2	202	Pur operon repressor (PurR), C-terminal domain {Ba	99.97
d1y0ba1	191	Xanthine phosphoribosyltransferase {Bacillus subti	99.95
d1vcha1	174	Putative phosphoribosyltransferase TTHA1613 {Therm	99.94
d2aeea1	208	Orotate PRTase {Streptococcus pyogenes [TaxId: 131	99.91
d1vdma1	153	Pprobable purine phosphoribosyltransferase PH0095	99.83
d1lh0a_	213	Orotate PRTase {Salmonella typhimurium [TaxId: 903	99.82
d1u9ya2	129	Phosphoribosylpyrophosphate synthetase {Methanocal	99.74
d1dkua2	149	Phosphoribosylpyrophosphate synthetase {Bacillus s	99.7
d2c4ka2	184	PRPP synthetase-associated protein 1 {Human (Homo	99.69
d1hgxa_	173	Hypoxanthine-guanine-xanthine PRTase {Tritrichomon	99.66
d1yfza1	178	Xanthine-guanine PRTase (XPRTase) {Thermoanaerobac	99.64
d1nula_	150	Xanthine-guanine PRTase (XPRTase) {Escherichia col	99.59
d1tc1a_	184	Hypoxanthine PRTase {Trypanosoma cruzi [TaxId: 569	99.58
d1wd5a_	208	Putative phosphoribosyltransferase TT1426 (TTHA146	99.57
d1j7ja_	172	Hypoxanthine PRTase {Salmonella typhimurium [TaxId	99.56
d1z7ga1	214	Hypoxanthine-guanine PRTase (HGPRTase) {Human (Hom	99.54
d1pzma_	183	Hypoxanthine-guanine-xanthine PRTase {Leishmania t	99.54
d1cjba_	228	Hypoxanthine-guanine PRTase (HGPRTase) {Plasmodium	99.54
d1ufra_	178	Pyrimidine operon regulator PyrR {Thermus thermoph	99.51
d1fsga_	233	Hypoxanthine-guanine-xanthine PRTase {Toxoplasma g	99.49
d1a3ca_	178	Pyrimidine operon regulator PyrR {Bacillus subtili	99.48
d1w30a_	182	Pyrimidine operon regulator PyrR {Mycobacterium tu	99.48
d1dqna_	230	Guanine PRTase {Giardia lamblia [TaxId: 5741]}	99.41
d1gph11	231	Glutamine PRPP amidotransferase, C-terminal domain	99.41
d1ecfa1	243	Glutamine PRPP amidotransferase, C-terminal domain	99.37
d1i5ea_	208	Uracil PRTase, Upp {Bacillus caldolyticus [TaxId:	98.17
d1o5oa_	210	Uracil PRTase, Upp {Thermotoga maritima [TaxId: 23	98.13
d1v9sa1	208	Uracil PRTase, Upp {Thermus thermophilus [TaxId: 2	97.89
d1bd3a_	224	Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811	97.83
d1xtta1	215	Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId	97.65
d1dkua1	159	Phosphoribosylpyrophosphate synthetase {Bacillus s	93.61
d1u9ya1	155	Phosphoribosylpyrophosphate synthetase {Methanocal	92.95
d2c4ka1	160	PRPP synthetase-associated protein 1 {Human (Homo	92.27
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	88.69
d1dcfa_	134	Receiver domain of the ethylene receptor {Thale cr	83.14

>d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-37  Score=234.08  Aligned_cols=173  Identities=44%  Similarity=0.823  Sum_probs=158.7

Q ss_pred             chHHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCC
Q 030139           10 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAK   86 (182)
Q Consensus        10 ~~~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp   86 (182)
                      ++.++.|.+.+|..|+||++|+.|+|+++++.||+.++.++..+++.+.+   .++|+|++++.+|+++|+.+|..+|+|
T Consensus         1 ~~~~~~l~~~i~~~pd~P~~Gi~f~Di~~il~~P~~~~~~~~~la~~~~~~~~~~~D~Iv~~e~~Gi~la~~lA~~l~~p   80 (178)
T d1zn7a1           1 DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLG   80 (178)
T ss_dssp             CHHHHHHHTTCEEEETSSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTGGGGTHHHHHHHHTCE
T ss_pred             ChHHHHHHHhccccCCCCCCCCeEEECchhhhCHHHHHHHHHHHHhhhhhhcCCCcceEEEeccccchhhhhhHHHcCCC
Confidence            56799999999999999999999999999999999999999999988754   579999999999999999999999999


Q ss_pred             eEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCc
Q 030139           87 FVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPEL  166 (182)
Q Consensus        87 ~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~  166 (182)
                      ++++||+.+.+.......+..+++...+++..+.+.+|++||||||+++||+|+.+++++++++|++++++++++++.+.
T Consensus        81 ~v~~Rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvg~~~ii~~~~~  160 (178)
T d1zn7a1          81 CVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSL  160 (178)
T ss_dssp             EEEEEETTCCCSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGGG
T ss_pred             ceEeeecCCCCccceeEEeeccccccceeeccCcccCCCeEEEehhhhhhchHHHHHHHHHHHCCCEEEEEEEEEEcCcC
Confidence            99999988877776666666666667788877888899999999999999999999999999999999999999999888


Q ss_pred             ccccccCCCCcccccC
Q 030139          167 KGRERLGEKPLFVLVS  182 (182)
Q Consensus       167 ~~~~~l~~~~~~~l~~  182 (182)
                      +|+++|.++|++||++
T Consensus       161 ~g~~~l~~~pv~SL~~  176 (178)
T d1zn7a1         161 KGREKLAPVPFFSLLQ  176 (178)
T ss_dssp             CHHHHHTTSCEEEEEE
T ss_pred             CHHHhcCCCCeEEEEE
Confidence            8999999999999974

>d1g2qa_ c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.3e-36  Score=228.77  Aligned_cols=169  Identities=40%  Similarity=0.760  Sum_probs=150.9

Q ss_pred             HHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhc----CCCccEEEeeCCCChhhHHHHHHHhCCCe
Q 030139           12 RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYK----DKNISVVAGIEARGFIFGPPIALAIGAKF   87 (182)
Q Consensus        12 ~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~----~~~~d~Iv~v~~~G~~~a~~la~~l~vp~   87 (182)
                      -++.|++.+|..|+||.+|+.|.|+++++.||..++.++..+++++.    ..++|+|+|++.+|+++|..+|..||+|+
T Consensus         6 ~~~~~~~~i~~~~dfP~~Gi~f~Di~~ll~dP~~~~~li~~l~~~l~~~~~~~~vD~Ivg~e~~Gi~la~~vA~~L~~p~   85 (178)
T d1g2qa_           6 YAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGVGF   85 (178)
T ss_dssp             HHHHHHHHCEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTCEE
T ss_pred             HHHHHHHhccCCCCCCCCCceEecChhhhcCHHHHHHHHHHHHHHHHhhhccCCCcEEEEeccccchhhHHHHHHhCCce
Confidence            46789999999999999999999999999999999988877766554    46899999999999999999999999999


Q ss_pred             EeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcc
Q 030139           88 VPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELK  167 (182)
Q Consensus        88 ~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~  167 (182)
                      +++||.++.+.......+..+++...+++..+.+.+|+||+||||+++||+|+.+++++++++|+++++++|++++.+.+
T Consensus        86 v~~RK~~k~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvgv~viid~~~~~  165 (178)
T d1g2qa_          86 VPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFLK  165 (178)
T ss_dssp             EEEEETTCSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCSS
T ss_pred             eeeeecccccccceEEEeeccccceeeeeccccccCCCEEEEEehHhhhChHHHHHHHHHHHcCCEEEEEEEEEEcCCCC
Confidence            99999888776665555554556667888888889999999999999999999999999999999999999999998888


Q ss_pred             cccccCCCCccccc
Q 030139          168 GRERLGEKPLFVLV  181 (182)
Q Consensus       168 ~~~~l~~~~~~~l~  181 (182)
                      |+++| +.|++||+
T Consensus       166 g~~~l-~~pv~SLi  178 (178)
T d1g2qa_         166 GRSKL-NAPVFTLL  178 (178)
T ss_dssp             CCCCC-SSCEEECC
T ss_pred             chHHc-CCCeEEeC
Confidence            99998 68999986

>d1l1qa_ c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [TaxId: 5741]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Giardia lamblia [TaxId: 5741]

Probab=100.00  E-value=1.7e-34  Score=220.41  Aligned_cols=169  Identities=39%  Similarity=0.663  Sum_probs=151.3

Q ss_pred             HHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeecc
Q 030139           14 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKP   93 (182)
Q Consensus        14 ~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~   93 (182)
                      +.+..++|..|+||.+|+.|.|+++++.||+.++.++..|++.+.+.++|+|+|++.+|+++|..+|..||+|+++.||.
T Consensus         5 ~~~~~~i~~~~dfp~~Gi~F~Di~~il~dp~~~~~~~~~la~~~~~~~~d~Ivgie~~Gi~lA~~lA~~Lg~p~v~~rk~   84 (181)
T d1l1qa_           5 ADAHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVALRKA   84 (181)
T ss_dssp             HHHHHTCEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEEEEET
T ss_pred             HHHHHhcCCCCCCCCCCccEEechhhhCCHHHHHHHHHHHHHHHhccCCCEEEeeccchhhhHHHHHHHhCCCceeEeec
Confidence            45788999999999999999999999999999999999999999888999999999999999999999999999999998


Q ss_pred             CCCCCceeeeeeeeeccce-eEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeE--EEEEEEEecCCccccc
Q 030139           94 KKLPGEVISEEYSLEYGKD-VMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHV--VECACVIELPELKGRE  170 (182)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~--v~v~~l~~~~~~~~~~  170 (182)
                      .+.++......+..++++. .+++..+.+.+|+|||||||+++||+|+.+++++++++|+++  +.+++++++.+.+|++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~lel~~~~l~~g~rVlIVDDvi~TGgT~~aa~~ll~~~Ga~v~~v~v~vlie~~~~~Gr~  164 (181)
T d1l1qa_          85 GKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEALKGRE  164 (181)
T ss_dssp             TSSCSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGGCHHH
T ss_pred             ccccccccccccccCCCCCceeeeeeeeecCCCeeEEehhhhhhcHHHHHHHHHHHHCCCceEEEEEEEEEEcCcCChHH
Confidence            8777776666666566554 477777777899999999999999999999999999999955  8889999988888999


Q ss_pred             ccCC--CCcccccC
Q 030139          171 RLGE--KPLFVLVS  182 (182)
Q Consensus       171 ~l~~--~~~~~l~~  182 (182)
                      +|.+  ++++||++
T Consensus       165 ~l~~~g~~v~Sl~k  178 (181)
T d1l1qa_         165 KVGQKCTRLFSVIR  178 (181)
T ss_dssp             HHTTTCCCEEEEEE
T ss_pred             HhhcCCCcEEEEEe
Confidence            9986  67888863

>d1qb7a_ c.61.1.1 (A:) Adenine PRTase {Leishmania donovani [TaxId: 5661]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Leishmania donovani [TaxId: 5661]

Probab=99.97  E-value=2.4e-31  Score=210.10  Aligned_cols=175  Identities=31%  Similarity=0.569  Sum_probs=151.2

Q ss_pred             cccchHHHHHhhccccC-CCC-CCCCceEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHH
Q 030139            7 KAQDPRIAGISSAIRVI-PDF-PKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALA   82 (182)
Q Consensus         7 ~~~~~~~~~l~~~~r~~-~~~-~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~   82 (182)
                      .+.|+..+.|...+||. |.| |.++..|+|++.++.+|+.++.+++.|++.++.  .++|+|+|++.+|+++|..+|..
T Consensus        13 ~~~~~l~~~l~~~~~~~~p~~~p~~~~~F~Di~~ll~~P~~~~~l~~~l~~~~~~~~~~~D~Ivgies~Gi~la~~lA~~   92 (236)
T d1qb7a_          13 DDSHALSQLLKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVE   92 (236)
T ss_dssp             CTTSHHHHHHHHHCCEECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHH
T ss_pred             hchHHHHHHHHhhccccCCCCCCCCCCEEEeChhHhcCHHHHHHHHHHHHHHHHhcCCCCCEEEeccccchhHHhhhhhh
Confidence            46788889999999985 777 788888999999999999999999999998874  57999999999999999999999


Q ss_pred             hCCCeEeeeccCCCCCcee-eeeeeeeccc---eeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEE
Q 030139           83 IGAKFVPMRKPKKLPGEVI-SEEYSLEYGK---DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECA  158 (182)
Q Consensus        83 l~vp~~~~rk~~~~~~~~~-~~~~~~~~~~---~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~  158 (182)
                      +|+|++++||..+.++... ...|..++++   +.+++..+.+.+|+|||||||+++||+|+.+++++++++|+++++++
T Consensus        93 Lg~p~v~vRK~~K~~g~~~~~~~~~~~y~~~~~~~l~i~~~~l~~g~rVlIVDDviaTGgT~~aa~~ll~~~Ga~Vvg~~  172 (236)
T d1qb7a_          93 LEIPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMV  172 (236)
T ss_dssp             HTCCEEEEBCGGGCCSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEE
T ss_pred             hhcceeeeeeccccCCccceeeeEEeeecccccccccchhhcccCCceEEEehhhhhccHHHHHHHHHHHHCCCEEEEEE
Confidence            9999999999888776543 3344444433   34677777788999999999999999999999999999999999999


Q ss_pred             EEEecCCcccccccCC--------CCccccc
Q 030139          159 CVIELPELKGRERLGE--------KPLFVLV  181 (182)
Q Consensus       159 ~l~~~~~~~~~~~l~~--------~~~~~l~  181 (182)
                      +++++.+.+|+++|.+        .|+++|+
T Consensus       173 ~vv~~~~~~g~~~l~~~~~~~~~~i~i~sL~  203 (236)
T d1qb7a_         173 SILSIPFLKAAEKIHSTANSRYKDIKFISLL  203 (236)
T ss_dssp             EEEECGGGCHHHHHHHHHHHTTTTCCEEEEE
T ss_pred             EEEEcCCCChHHHHHhccccccCCccEEEee
Confidence            9999988889998763        5677765

>d1o57a2 c.61.1.1 (A:75-276) Pur operon repressor (PurR), C-terminal domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pur operon repressor (PurR), C-terminal domain
species: Bacillus subtilis [TaxId: 1423]

Probab=99.97  E-value=1.5e-29  Score=195.92  Aligned_cols=169  Identities=21%  Similarity=0.358  Sum_probs=131.1

Q ss_pred             hHHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEee
Q 030139           11 PRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM   90 (182)
Q Consensus        11 ~~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~   90 (182)
                      +-+|+|++.++. |++..|| .|+|+..++.+|..++.+++.+++.+.+.++|+|+|++.+|+++|+.+|..||+|++++
T Consensus         8 ~~~~~l~~~l~~-~~~~lpg-~yid~~~ll~~P~~l~~i~~~la~~~~~~~iD~Vvgi~~~Gi~lA~~lA~~L~~p~v~~   85 (202)
T d1o57a2           8 EFVQTLGQSLAN-PERILPG-GYVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIV   85 (202)
T ss_dssp             HHHHHHHHHHTC-GGGEETT-TEECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEEE
T ss_pred             HHHHHHHHHhcC-CCccCCC-CeEECchhcCCHHHHHHHHHHHHHHhccCCCCEEEEeccCcchhhHHHHHHhhcceeee
Confidence            344555544442 3333343 38899999999999999999999999988899999999999999999999999999999


Q ss_pred             eccCCCC-Cceeeeeeeeeccc--eeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcc
Q 030139           91 RKPKKLP-GEVISEEYSLEYGK--DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELK  167 (182)
Q Consensus        91 rk~~~~~-~~~~~~~~~~~~~~--~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~  167 (182)
                      ||+.+.+ +...+..|...++.  ..+++..+.+.+|++||||||+++||+|+.+++++++++|+++++++|++++...+
T Consensus        86 Rk~~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~l~~g~rVlIVDDvi~TG~T~~a~~~~l~~~Ga~vv~~~vlvd~~~~~  165 (202)
T d1o57a2          86 RKDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGVD  165 (202)
T ss_dssp             BCC-----CCEEEEEEECSSCCSEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESSCT
T ss_pred             eccCCCCCCCeEEEEeecCCCCccccchhcccccccCceEEEEhHHhhhhHHHHHHHHHHHHCCCEEEEEEEEEECCCcc
Confidence            9887653 34455444433322  34677777788999999999999999999999999999999999999999997544


Q ss_pred             cccccCCCCccccc
Q 030139          168 GRERLGEKPLFVLV  181 (182)
Q Consensus       168 ~~~~l~~~~~~~l~  181 (182)
                      ++.....+++++|.
T Consensus       166 ~~~~~~~~~l~sl~  179 (202)
T d1o57a2         166 ERLVDEYMSLLTLS  179 (202)
T ss_dssp             TSCCSCCEEEEEEE
T ss_pred             cchhhCCCceEEEE
Confidence            44333346666664

>d1y0ba1 c.61.1.1 (A:1-191) Xanthine phosphoribosyltransferase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Xanthine phosphoribosyltransferase
species: Bacillus subtilis [TaxId: 1423]

Probab=99.95  E-value=3.3e-28  Score=186.91  Aligned_cols=168  Identities=20%  Similarity=0.301  Sum_probs=136.2

Q ss_pred             HHHHhhccccCCCCCCCCceEEechhhh---cCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe
Q 030139           13 IAGISSAIRVIPDFPKPGIMFQDITTLL---LDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP   89 (182)
Q Consensus        13 ~~~l~~~~r~~~~~~~~~~~~~d~~~l~---~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~   89 (182)
                      |+.|++.|+.-+.++.+++.+.+  +++   .||+.++.+++.|++.+...++|+|+|++.+|+++|..+|..|++|+++
T Consensus         1 ~~~l~~~i~~~~~~~~~~~l~~~--~~l~~~~dP~ll~~i~~~la~~~~~~~~d~Ivg~~~~Gi~lA~~iA~~L~~p~v~   78 (191)
T d1y0ba1           1 MEALKRKIEEEGVVLSDQVLKVD--SFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVF   78 (191)
T ss_dssp             HHHHHHHHHHHCEEETTTEEECT--TTTSSEECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEEE
T ss_pred             ChHHHHHHhcCCeeCCCCcEeeh--HhhCcccCHHHHHHHHHHHHHHhccCCCCEEEecCcccHHHHHHHHhhccceEEE
Confidence            46677777776767777765543  344   4899999999999999988889999999999999999999999999999


Q ss_pred             eeccCCCCCc--eeeee-eeeec-cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139           90 MRKPKKLPGE--VISEE-YSLEY-GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus        90 ~rk~~~~~~~--~~~~~-~~~~~-~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      +||..+.+..  ..... ++.+. ....+.+..+.+.+|++|+||||+++||+|+.+++++++++|++++++++++++.+
T Consensus        79 ~Rk~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~rVlIVDDvi~TG~T~~~~~~ll~~~Ga~vv~v~vlid~~~  158 (191)
T d1y0ba1          79 ARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSF  158 (191)
T ss_dssp             EBSSCCSSCCSSEEEEEEEETTTTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETT
T ss_pred             EEeecCcCCCCceeEEEEEeeeccceeeeeeehhhhcCCceEEEhHHhhhhChHHHHHHHHHHHCCCEEEEEEEEEEcCC
Confidence            9988765432  22222 22122 22346666667789999999999999999999999999999999999999999988


Q ss_pred             cccccccCC--CCcccccC
Q 030139          166 LKGRERLGE--KPLFVLVS  182 (182)
Q Consensus       166 ~~~~~~l~~--~~~~~l~~  182 (182)
                      ..|+++|.+  +|++||++
T Consensus       159 ~~gr~~l~~~g~~v~SL~~  177 (191)
T d1y0ba1         159 QPGRDELVKLGYRVESLAR  177 (191)
T ss_dssp             STHHHHHHHTTCCEEEEEE
T ss_pred             cCHHHHHHHCCCCEEEEEE
Confidence            788998885  77888863

>d1vcha1 c.61.1.1 (A:2-175) Putative phosphoribosyltransferase TTHA1613 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Putative phosphoribosyltransferase TTHA1613
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=2.2e-26  Score=174.20  Aligned_cols=162  Identities=20%  Similarity=0.246  Sum_probs=121.9

Q ss_pred             HhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCC
Q 030139           16 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKK   95 (182)
Q Consensus        16 l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~   95 (182)
                      ++...|.+|.++.+...|++...++.||+.++.+++.+++.+. .++|+|+|++.+|+++|+.+|..|++|++++||+++
T Consensus         7 ~~~~~r~lp~~~~~~~~~i~~~~~l~dp~~~~~~~~~la~~~~-~~~D~Ivgi~~~Gi~~A~~lA~~L~~p~~~~rk~~k   85 (174)
T d1vcha1           7 VGGVTRHVPLIEPLPGRRIPLVEFLGDPEFTRAAAEALRPLVP-KEAEILFTTETSPIPLTHVLAEALGLPYVVARRRRR   85 (174)
T ss_dssp             ETTEEEEECEEEEETTEEEECCCCTTCHHHHHHHHHHHGGGSC-TTCCEEEEESSTHHHHHHHHHHHHTCCEEEEBSSCC
T ss_pred             eCCceeeCCCcccCCcceEEchhhhCCHHHHHHHHHHHHHHcC-CCCCEEEecCCCcchHhHHHHHHcCCCEEEEEEecc
Confidence            4556688888875444789999999999999999999998764 579999999999999999999999999999998876


Q ss_pred             CCCc--eeeeeeeeecccee-EEEEc--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCc-ccc
Q 030139           96 LPGE--VISEEYSLEYGKDV-MEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPEL-KGR  169 (182)
Q Consensus        96 ~~~~--~~~~~~~~~~~~~~-~~l~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~-~~~  169 (182)
                      ....  .....++.+.+... ..+..  ....+|++||||||+++||+|+.+++++|+++|+++++++|+++++.. ...
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rVlIVDDvi~TG~Tl~a~~~~l~~~Ga~vv~v~vl~~~G~~~~~~  165 (174)
T d1vcha1          86 PYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTPGLAV  165 (174)
T ss_dssp             TTCCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSCCSSCC
T ss_pred             CCCCCCeEEEEEEEEeccceeEEEeeccccccCCCEEEEEeceecccHHHHHHHHHHHHCCCEEEEEEEEEeCCCCCCCc
Confidence            5322  22222222222222 22221  234689999999999999999999999999999999999999987631 233


Q ss_pred             cccCCCCcc
Q 030139          170 ERLGEKPLF  178 (182)
Q Consensus       170 ~~l~~~~~~  178 (182)
                      ..+.+.|++
T Consensus       166 ~~~~~~P~~  174 (174)
T d1vcha1         166 DTVAELPVL  174 (174)
T ss_dssp             EEEEECCCC
T ss_pred             cccccCCCC
Confidence            334456653

>d2aeea1 c.61.1.1 (A:1-208) Orotate PRTase {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Orotate PRTase
species: Streptococcus pyogenes [TaxId: 1314]

Probab=99.91  E-value=2.7e-24  Score=166.75  Aligned_cols=137  Identities=26%  Similarity=0.333  Sum_probs=117.0

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeec
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY  109 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~  109 (182)
                      .|+|...++.+|+.++.++..+++.+.+  .++|+|+|++.+|+++|+.+|..+++|+.++||..+.            +
T Consensus        35 ~Y~d~~~~~~~p~~~~~i~~~~~~~i~~~~~~~d~I~G~a~~Gip~a~~ia~~~~~p~~~vRK~~K~------------~  102 (208)
T d2aeea1          35 IYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKD------------H  102 (208)
T ss_dssp             EEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC--------------
T ss_pred             hheeChhhhcCHHHHHHHHHHHHHHHhhcccccccccccchhhhHHHHHHHHhhccceEEeeecccc------------c
Confidence            6999999999999999999999998854  5789999999999999999999999999999987652            2


Q ss_pred             cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC--CCcccccC
Q 030139          110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE--KPLFVLVS  182 (182)
Q Consensus       110 ~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~--~~~~~l~~  182 (182)
                      +.+..  ..+...+|++|+||||++|||+|+.++++.|+++|+.+++++|++++....+.+.+.+  +|++||+.
T Consensus       103 G~~~~--ieG~~~~G~~VlvVeDviTTG~S~~~ai~~l~~~g~~V~~~~vivdr~~~~~~~~l~~~gi~~~sL~~  175 (208)
T d2aeea1         103 GAGNQ--IEGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSN  175 (208)
T ss_dssp             --CCS--EESCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESCC
T ss_pred             cccce--eeccccCCCEEEEehhhhhhcccHHHHHHHHHHcCCEEEEEEEEEEcccchHHHHHHHcCCCEEEEec
Confidence            32221  1245678999999999999999999999999999999999999999986677777764  77888863

>d1vdma1 c.61.1.1 (A:1-153) Pprobable purine phosphoribosyltransferase PH0095 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pprobable purine phosphoribosyltransferase PH0095
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.83  E-value=2.1e-20  Score=138.06  Aligned_cols=120  Identities=20%  Similarity=0.296  Sum_probs=94.8

Q ss_pred             hhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeecccee-EE
Q 030139           38 TLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDV-ME  115 (182)
Q Consensus        38 ~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~-~~  115 (182)
                      .++.+++.++..++.||.++.+.++|+|||+++||+++|..+|+.|+ .|+..++.......+        +.+... +.
T Consensus         3 k~~~s~~~i~~~i~~la~~i~~~~~d~IVgI~~gG~~~A~~la~~L~~~~~~~~~~~~y~~~~--------~~~~~~~~~   74 (153)
T d1vdma1           3 KVYLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGID--------ERGEKPVIT   74 (153)
T ss_dssp             EEECCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC----------CCCSSCEEE
T ss_pred             eEEcCHHHHHHHHHHHHHHHHccCCCEEEEECCCcchhHHHHHHHhCCCceEEEEEeeccccc--------ccCCcceee
Confidence            36778999999999999999878899999999999999999999997 566665433211000        011111 22


Q ss_pred             EEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139          116 MHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE  165 (182)
Q Consensus       116 l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~  165 (182)
                      .......+|++||||||+++||+||.+++++|++.|++.|+++|+++++.
T Consensus        75 ~~~~~~~~gk~VLIVDDii~TG~Tl~~~~~~l~~~g~~~v~~avl~~k~~  124 (153)
T d1vdma1          75 IPIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPW  124 (153)
T ss_dssp             ECCCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTT
T ss_pred             cccccccCCCEEEEEeeeeccCCcHHHHHHHHHhcCCceEEEEEEEECCC
Confidence            22234478999999999999999999999999999999999999999864

>d1lh0a_ c.61.1.1 (A:) Orotate PRTase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Orotate PRTase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.82  E-value=6.2e-20  Score=142.42  Aligned_cols=133  Identities=16%  Similarity=0.287  Sum_probs=101.9

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHh------CCCeEeeeccCCCCCceeee
Q 030139           32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRKPKKLPGEVISE  103 (182)
Q Consensus        32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l------~vp~~~~rk~~~~~~~~~~~  103 (182)
                      .|+|... +.++.....++..++..+..  .++|+|+|++.+|+|+|+.+|..+      .+|+.+.||..+.       
T Consensus        33 ~Y~d~r~-~~~~~~~~~i~~~~~~~~~~~~~~~d~i~G~a~gGipla~~va~~l~~~~~~~~p~~~~Rke~k~-------  104 (213)
T d1lh0a_          33 YFFNAGL-FNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKD-------  104 (213)
T ss_dssp             EEECGGG-CCBHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEECSSCCS-------
T ss_pred             EeEeCcc-cCCcHHHHHHHHHHHHhhhhcccccceeccccccchHHHHHHHHHHHHhcCCCCceEEeeccccc-------
Confidence            6888874 45666677888888876643  589999999999999999999987      4688888877652       


Q ss_pred             eeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCccccccc-------C--C
Q 030139          104 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL-------G--E  174 (182)
Q Consensus       104 ~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l-------~--~  174 (182)
                           ++......  +. .++.+|+||||++|||+|+.++++.|++.|+.+++++|++++.+ .+...+       .  +
T Consensus       105 -----~G~~~~ie--G~-~~~~~VliVeDViTTGgS~~eaie~l~~~G~~V~~v~vivDR~e-~~~~~~~~~~~~~~~~g  175 (213)
T d1lh0a_         105 -----HGEGGSLV--GS-ALQGRVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQE-RGRGEISAIQEVERDYG  175 (213)
T ss_dssp             -----STTCSSEE--ES-CCCSEEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCB-BCSSSSBHHHHHHHHHC
T ss_pred             -----cccccccc--cC-cCCCcEEEEccchhhcccHHHHHHHHHHhcccceeEEEEEeecc-cccchhHHHHHHHHHcC
Confidence                 23222111  22 23448999999999999999999999999999999999999965 344332       1  4


Q ss_pred             CCccccc
Q 030139          175 KPLFVLV  181 (182)
Q Consensus       175 ~~~~~l~  181 (182)
                      +|++||+
T Consensus       176 i~~~sl~  182 (213)
T d1lh0a_         176 CKVISII  182 (213)
T ss_dssp             CEEEEEE
T ss_pred             CeEEEEc
Confidence            7788875

>d1u9ya2 c.61.1.2 (A:156-284) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Methanocaldococcus jannaschii [TaxId: 2190]

Probab=99.74  E-value=1.1e-18  Score=125.44  Aligned_cols=105  Identities=21%  Similarity=0.326  Sum_probs=82.8

Q ss_pred             cEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHH
Q 030139           63 SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSA  142 (182)
Q Consensus        63 d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~  142 (182)
                      .+||+|+.||..+|..+|+.||.|+.++.|+|..+....           ..  .....++||+|+||||+++||+|+.+
T Consensus         2 ~ViVsPD~G~~~~a~~~a~~l~~~~a~~~K~R~~~~~~~-----------~~--~~~gdv~gk~viIvDDii~TGgTl~~   68 (129)
T d1u9ya2           2 PIVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPTEIQ-----------IA--PKTLDAKDRDVFIVDDIISTGGTMAT   68 (129)
T ss_dssp             CEEEESSGGGHHHHHHHHHHHTCCEEEBC---------------------CC--BSSCCCTTCCEEEEEEECSSSHHHHH
T ss_pred             CEEEEECccHHHHHHHHHHHcCCCEEEEEeeecccccce-----------ee--cccccccceEEEEEcchhcccccHHH
Confidence            379999999999999999999999998877764211100           00  00124799999999999999999999


Q ss_pred             HHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139          143 AIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL  180 (182)
Q Consensus       143 ~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l  180 (182)
                      ++++|++.||+.|.+++.|..+..++.++|.+.++..+
T Consensus        69 aa~~Lk~~GA~~V~~~~tHgifs~~a~~~l~~~~i~~i  106 (129)
T d1u9ya2          69 AVKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEV  106 (129)
T ss_dssp             HHHHHHHTTCCSEEEEEEECCCCTTHHHHHHHHTCSEE
T ss_pred             HHHHHHhcCCcceEEEEeccccChHHHHHHHhCCCCEE
Confidence            99999999999999999999998888999887665543

>d1dkua2 c.61.1.2 (A:167-315) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Bacillus subtilis [TaxId: 1423]

Probab=99.70  E-value=2.1e-17  Score=121.27  Aligned_cols=104  Identities=22%  Similarity=0.328  Sum_probs=84.6

Q ss_pred             EEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHH
Q 030139           64 VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAA  143 (182)
Q Consensus        64 ~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~  143 (182)
                      +||+|+.||...|..+|+.||.|+..+.|++..++..           ..+.+.  ..++||+|+||||+++||+|+.++
T Consensus         3 vvVsPD~G~~kra~~~a~~l~~~~a~~~K~r~~~~~~-----------~~~~~~--GdV~gk~viIvDDmi~TGgTl~~a   69 (149)
T d1dkua2           3 VIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPNVA-----------EVMNIV--GNIEGKTAILIDDIIDTAGTITLA   69 (149)
T ss_dssp             EEEESSGGGHHHHHHHHHHTTCCEEEEECC--------------------CEEE--SCCTTCEEEEECSEESSCHHHHHH
T ss_pred             EEEEeCccHHHHHHHHHHHcCCCEEEEEeccCCCCee-----------EEEeee--eeeCCCEEEEEhhhhhchHhHHHH
Confidence            7899999999999999999999999887766421110           111221  237899999999999999999999


Q ss_pred             HHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139          144 IRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL  180 (182)
Q Consensus       144 ~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l  180 (182)
                      ++.|++.||..|.++|.|+.+..++.++|.+.++..+
T Consensus        70 a~~L~~~GA~~V~~~~THglfs~~a~~~l~~~~i~~i  106 (149)
T d1dkua2          70 ANALVENGAKEVYACCTHPVLSGPAVERINNSTIKEL  106 (149)
T ss_dssp             HHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSEEEE
T ss_pred             HHHHHHhCCceEEEEEeecccCchHHHHHhccCCceE
Confidence            9999999999999999999999999999988776544

>d2c4ka2 c.61.1.2 (A:167-350) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: PRPP synthetase-associated protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.2e-17  Score=125.27  Aligned_cols=119  Identities=13%  Similarity=0.086  Sum_probs=84.4

Q ss_pred             CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceee-eeeee---ec---------------cceeEEEEccc
Q 030139           60 KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS-EEYSL---EY---------------GKDVMEMHVGA  120 (182)
Q Consensus        60 ~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~-~~~~~---~~---------------~~~~~~l~~~~  120 (182)
                      ++..+||+++.||.+.|..+|+.||+|+.++.|++........ .....   +.               ....+.+.  .
T Consensus         2 ~~n~VVvsPd~Ggv~ra~~~A~~L~~~~a~i~k~r~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vi--G   79 (184)
T d2c4ka2           2 YRNAVIVAKSPDAAKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITVV--G   79 (184)
T ss_dssp             GGGCEEEESSGGGHHHHHHHHHHHTCEEEEEC---------------------------------------CCCCEE--S
T ss_pred             CCCCEEEEECcchHHHHHHHHHHhCCCEEEEEeeeccccccccccccCCccccccccccccccccccccceeeeEEE--E
Confidence            3456899999999999999999999999887655432110000 00000   00               00001111  1


Q ss_pred             cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139          121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL  180 (182)
Q Consensus       121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l  180 (182)
                      .++||+|+||||+++||+|+..+++.|++.||+.|.+++.|..+..++.++|.+.++..+
T Consensus        80 dVkGk~vIIVDD~I~TG~T~~~a~~~Lk~~GA~~v~~~~tH~~~~~~a~~~l~~~~i~~i  139 (184)
T d2c4ka2          80 DVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSVDEV  139 (184)
T ss_dssp             CCTTEEEEEECSEESSTHHHHHHHHHHHTTTEEEEEEEEEEECCCTTHHHHHHHSSCCEE
T ss_pred             eccCCEEEEecchhcchHHHHHHHHHHHhcccccceEEEEeeccCchHHHHhhcCCccEE
Confidence            379999999999999999999999999999999999999999999899999887766544

>d1hgxa_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Tritrichomonas foetus [TaxId: 5724]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine-xanthine PRTase
species: Tritrichomonas foetus [TaxId: 5724]

Probab=99.66  E-value=2.6e-16  Score=118.06  Aligned_cols=121  Identities=13%  Similarity=0.183  Sum_probs=89.6

Q ss_pred             chhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeec--c
Q 030139           36 ITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY--G  110 (182)
Q Consensus        36 ~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~--~  110 (182)
                      +..++.+++.++..++.||.++.+   .+..++||+.+||+++|..+++.++.|+.......        ..|..+.  +
T Consensus         4 i~~il~s~~~I~~~i~rlA~~I~~~~~~~~~vivgIl~GG~~fa~~L~~~l~~~~~~~~~~~--------~~y~~~~~~~   75 (173)
T d1hgxa_           4 LERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIIC--------SSYSGTKSTG   75 (173)
T ss_dssp             EEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEE--------EC--------
T ss_pred             hheEecCHHHHHHHHHHHHHHHHHHcCCCCcEEEEEecCcHHHHHHHHHhcCCCceeEEEEE--------EecCCccccc
Confidence            445677888888888888877653   35669999999999999999999998864321110        0111011  1


Q ss_pred             ceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          111 KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       111 ~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                      ...+........+||+||||||+++||.||..+.+.|.+.++..+.++|++++.
T Consensus        76 ~~~i~~~~~~~~~gk~VLlVDDI~dtG~Tl~~~~~~l~~~~p~~v~~avL~~K~  129 (173)
T d1hgxa_          76 NLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKD  129 (173)
T ss_dssp             -CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEEC
T ss_pred             ceeeeecccccccccceeEEeeEechhHHHHHHHHHHHhcCCCeeEEEEEEEec
Confidence            111221223458899999999999999999999999999999999999999996

>d1yfza1 c.61.1.1 (A:3-180) Xanthine-guanine PRTase (XPRTase) {Thermoanaerobacter tengcongensis [TaxId: 119072]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Xanthine-guanine PRTase (XPRTase)
species: Thermoanaerobacter tengcongensis [TaxId: 119072]

Probab=99.64  E-value=4.2e-16  Score=117.43  Aligned_cols=122  Identities=16%  Similarity=0.224  Sum_probs=91.5

Q ss_pred             echhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeee-cc
Q 030139           35 DITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLE-YG  110 (182)
Q Consensus        35 d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~-~~  110 (182)
                      |+..++.+++.++...+.||.++.+   .+..++||+.+||+++|..+++.++.|+...-..        ...|..+ ..
T Consensus         5 ~i~~vl~s~e~I~~~i~~LA~~I~~~~~~~~~vivgI~~GG~~fa~~L~~~l~~~~~~~~~~--------~~~y~~~~~~   76 (178)
T d1yfza1           5 DIEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLA--------VSSYGSSTKS   76 (178)
T ss_dssp             SEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEE--------EEECSHHHHH
T ss_pred             chheEEcCHHHHHHHHHHHHHHHHHHhCCCCcEEEEecCCceeHHHHHHhhcccceeeeEEE--------EEEecCCeec
Confidence            3455788999999999999987753   3566999999999999999999999876432100        0111111 11


Q ss_pred             ceeEEEE--ccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          111 KDVMEMH--VGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       111 ~~~~~l~--~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                      .+...+.  .....+||+||||||+++||.||..+++.|.+.|++.+.+++++++.
T Consensus        77 ~~~~~~~~~~~~~~~gk~VLlVDDVldTG~Tl~~~~~~l~~~~~~~v~~avL~~K~  132 (178)
T d1yfza1          77 SGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKP  132 (178)
T ss_dssp             HCCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECG
T ss_pred             CCceEEecCCccCCCCCEEEEEeeeehhhHHHHHHHHHHHhhCccceEEEEEEEcC
Confidence            1112221  12357899999999999999999999999999999999999999985

>d1nula_ c.61.1.1 (A:) Xanthine-guanine PRTase (XPRTase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Xanthine-guanine PRTase (XPRTase)
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=1.8e-15  Score=111.02  Aligned_cols=111  Identities=17%  Similarity=0.232  Sum_probs=81.4

Q ss_pred             hhcCHHHHHHHHHHHHHHhcC-CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEE
Q 030139           39 LLLDTKAFRDTIDLFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMH  117 (182)
Q Consensus        39 l~~~~~~~~~~~~~la~~~~~-~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~  117 (182)
                      ++.+++.++..++.||.++.+ .++++|+|+.+||+.+|..+++.|++|.....+.....+.        +.+...+.  
T Consensus         3 ~~isw~~i~~~~~~La~~I~~~~~~~~IvgI~rGG~i~a~~L~~~l~~~~~~~~~~~~y~~~--------~~~~~~~~--   72 (150)
T d1nula_           3 YIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHD--------NQRELKVL--   72 (150)
T ss_dssp             EECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC----------------CEEE--
T ss_pred             EEecHHHHHHHHHHHHHHHHhhCCCCEEEEEccChhHHHHHHHHHhccCcceEEEEEeccCc--------cccceeee--
Confidence            467899999999999998865 5789999999999999999999999986443221110000        00111111  


Q ss_pred             ccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          118 VGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       118 ~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                      ......|++||||||+++||.||..+.+.|++     +++++++.++
T Consensus        73 ~~~~~~gk~VLiVDDI~dtG~Tl~~~~~~l~~-----~~~atl~~k~  114 (150)
T d1nula_          73 KRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKP  114 (150)
T ss_dssp             ECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECG
T ss_pred             eccccCCCceEEEEecccchHHHHHHHHHhhc-----CcEEEEEEcc
Confidence            13346799999999999999999999999965     3567777775

>d1tc1a_ c.61.1.1 (A:) Hypoxanthine PRTase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine PRTase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.58  E-value=9.5e-15  Score=110.35  Aligned_cols=119  Identities=18%  Similarity=0.224  Sum_probs=84.6

Q ss_pred             chhhhcCHHHHHHHHHHHHHHhcC----------CCccEEEeeCCCChhhHHHHHHHh---CCCeEe--eeccCCCCCce
Q 030139           36 ITTLLLDTKAFRDTIDLFVERYKD----------KNISVVAGIEARGFIFGPPIALAI---GAKFVP--MRKPKKLPGEV  100 (182)
Q Consensus        36 ~~~l~~~~~~~~~~~~~la~~~~~----------~~~d~Iv~v~~~G~~~a~~la~~l---~vp~~~--~rk~~~~~~~~  100 (182)
                      ...++.+++.++..++.||.++.+          .++.+++|+.+||+++|..+++.+   ..|...  +...+      
T Consensus         4 ~ekil~s~~eI~~~i~~lA~qI~~~y~~~~~~~~~~~~viigI~~Gg~~fa~~L~~~l~~~~~~~~i~~~~~~~------   77 (184)
T d1tc1a_           4 AEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSS------   77 (184)
T ss_dssp             SCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEEC------
T ss_pred             ccEEEcCHHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEEcCCcHHHHHHHHHHhhhcCCCeeeeeEEEEe------
Confidence            334667888888888888876642          245689999999999999999987   344432  21111      


Q ss_pred             eeeeeeee-cccee--EEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          101 ISEEYSLE-YGKDV--MEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       101 ~~~~~~~~-~~~~~--~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                          |... .....  .........+||+||||||+++||.||.++++.|++.|++.+.+++++.+.
T Consensus        78 ----~~~~~~~~~~~~~~~~~~~~~~gk~VLlVDDIldTG~Tl~~~~~~l~~~~~~~i~~avL~~k~  140 (184)
T d1tc1a_          78 ----YGEGLTSSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKR  140 (184)
T ss_dssp             ----C---------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECT
T ss_pred             ----ecccccccccccccccCcccccceeEEEEecchhHHHHHHHHHHHHhhhcCccccEEEEEEec
Confidence                1000 01111  111123458899999999999999999999999999999999999999864

>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Putative phosphoribosyltransferase TT1426 (TTHA1462)
species: Thermus thermophilus [TaxId: 274]

Probab=99.57  E-value=9.8e-15  Score=112.16  Aligned_cols=124  Identities=24%  Similarity=0.266  Sum_probs=80.9

Q ss_pred             HHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHhCCCeEee--eccCCCCCceeeeeeeeeccce-----------
Q 030139           48 DTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPM--RKPKKLPGEVISEEYSLEYGKD-----------  112 (182)
Q Consensus        48 ~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~--rk~~~~~~~~~~~~~~~~~~~~-----------  112 (182)
                      .+++.||+.+..  .+.++|+++|.||+++|..+|..|++|+...  ++.+....+........+.+..           
T Consensus         8 ~Ag~~LA~~l~~~~~~~~vVl~ip~ggv~~A~~iA~~L~~p~d~~~~~~i~~p~~~e~~~gavs~~~~~~~~~~~~~~~~   87 (208)
T d1wd5a_           8 HAGALLAEALAPLGLEAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYAD   87 (208)
T ss_dssp             HHHHHHHHHHGGGCCCSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEEETTCCEEECTTHHHHSC
T ss_pred             HHHHHHHHHHHHcCCCCCEEEeCCCCcHHHHHHHHHHcCCCceeEEEeeccCCCchhhhhceeecCCCeEechHHHhhcC
Confidence            456677776654  3568999999999999999999999998543  2222111000000000000000           


Q ss_pred             -----------------e--EE--EEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccc
Q 030139          113 -----------------V--ME--MHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER  171 (182)
Q Consensus       113 -----------------~--~~--l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~  171 (182)
                                       .  ..  ......++||+|+||||+++||+||.++++.|++.||+.|.+++.+..+  ++.++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gk~ViLVDD~I~TG~T~~aa~~~L~~~ga~~V~~a~~v~~~--~~~~~  165 (208)
T d1wd5a_          88 QSYLEREAARQRDVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASP--EAVER  165 (208)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCH--HHHHH
T ss_pred             chhhhhHHHHHHHHHHhhcceeeccCCCcccCCCEEEEEcchhhhhHHHHHHHHHHHhcCCCEEEEeeccCCh--HHHHh
Confidence                             0  00  0001347999999999999999999999999999999988877666443  44555


Q ss_pred             cC
Q 030139          172 LG  173 (182)
Q Consensus       172 l~  173 (182)
                      +.
T Consensus       166 l~  167 (208)
T d1wd5a_         166 LK  167 (208)
T ss_dssp             HH
T ss_pred             hc
Confidence            43

>d1j7ja_ c.61.1.1 (A:) Hypoxanthine PRTase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine PRTase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.56  E-value=6.8e-15  Score=110.08  Aligned_cols=118  Identities=15%  Similarity=0.238  Sum_probs=85.6

Q ss_pred             hhcCHHHHHHHHHHHHHHhc----C-CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeee-ccce
Q 030139           39 LLLDTKAFRDTIDLFVERYK----D-KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLE-YGKD  112 (182)
Q Consensus        39 l~~~~~~~~~~~~~la~~~~----~-~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~-~~~~  112 (182)
                      ++.+++.++...+.||.++.    + .+..+++|+.+||+++|..+++.++.++...-..-+        .|... ...+
T Consensus         5 ilis~~~I~~~I~rlA~~I~e~~~~~~~~~vivgIl~GG~~fa~~L~~~l~~~~~~~~~~~~--------~~~~~~~~~~   76 (172)
T d1j7ja_           5 VMIPEAEIKARIAELGRQITERYKDSGSEMVLVGLLRGSFMFMADLCREVQVPHEVDFMTAS--------SYGSGMSTTR   76 (172)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETTTTHHHHHHHHTTCCSCCEEEEEBCC-----------------C
T ss_pred             EEcCHHHHHHHHHHHHHHHHHHhcccCCceEEEEEcCCcHHHHHHHHHHhCCcccCCeEEEE--------ecCCCccccC
Confidence            45678888888888887664    2 356799999999999999999999988643211110        00000 0111


Q ss_pred             eEEEE--ccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          113 VMEMH--VGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       113 ~~~l~--~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                      ...+.  .....+||+||||||+++||.||.++++.|.+.|++.+.+++++++.
T Consensus        77 ~~~~~~~~~~~~~gk~VLlVDDVldTG~TL~~~~~~l~~~~p~~i~~avL~~k~  130 (172)
T d1j7ja_          77 DVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILGLREPKSLAICTLLDKP  130 (172)
T ss_dssp             CCCCSBCCSSCCBTSEEEEEEEEESSCHHHHHHHHHHHTTCBSEEEEEEEEECG
T ss_pred             ceeeecCCCcccCCCEEEEEeeehhHHHHHHHHHHHHHhhCCCceEEEEEEEec
Confidence            11111  12347899999999999999999999999999999999999999984

>d1z7ga1 c.61.1.1 (A:4-217) Hypoxanthine-guanine PRTase (HGPRTase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine PRTase (HGPRTase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.8e-14  Score=111.29  Aligned_cols=122  Identities=16%  Similarity=0.208  Sum_probs=88.7

Q ss_pred             echhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHh---------CCCeEeeeccCCCCCceee
Q 030139           35 DITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAI---------GAKFVPMRKPKKLPGEVIS  102 (182)
Q Consensus        35 d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l---------~vp~~~~rk~~~~~~~~~~  102 (182)
                      |+..++.+.+.++...+.||.++.+   .+..++||+.+||+++|..|.++|         .+|+..---..+       
T Consensus        27 ~~~~ilis~~~I~~~I~rLA~qI~~~y~~k~~vlVgIl~Gg~~Fa~dL~~~L~~~~~~~~~~~~~~i~~~~~~-------   99 (214)
T d1z7ga1          27 DLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLK-------   99 (214)
T ss_dssp             TEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEEEEEECBC-------
T ss_pred             cccEEecCHHHHHHHHHHHHHHHHHHcCCCCeEEEEEECCcEehHHHHHHHHHHhcccCCcccceeeeeeeee-------
Confidence            4567888999999988888887742   466799999999999999999998         455533111100       


Q ss_pred             eeeeeec-cceeEEEE--ccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          103 EEYSLEY-GKDVMEMH--VGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       103 ~~~~~~~-~~~~~~l~--~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                       .|..+. ......+.  .....+||+||||||+++||.||.++++.|++.|++.+.+++++++.
T Consensus       100 -sy~~~~~~~~~~~~~~~~~~~i~gk~VLiVDDIlDTG~TL~~~~~~l~~~gp~sv~~avLldK~  163 (214)
T d1z7ga1         100 -SYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKR  163 (214)
T ss_dssp             -----------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEEC
T ss_pred             -ecCCcccccccceeccCChHhhhhceEEEecchhhHHHHHHHHHHHHHhhCCCeEEEEEEEEcc
Confidence             010000 00000111  12347899999999999999999999999999999999999999975

>d1pzma_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Leishmania tarentolae [TaxId: 5689]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine-xanthine PRTase
species: Leishmania tarentolae [TaxId: 5689]

Probab=99.54  E-value=2.9e-14  Score=107.66  Aligned_cols=117  Identities=13%  Similarity=0.155  Sum_probs=82.0

Q ss_pred             hhcCHHHHHHHHHHHHHHhcC---------CCccEEEeeCCCChhhHHHHHHHhC---CCeEe--eeccCCCCCceeeee
Q 030139           39 LLLDTKAFRDTIDLFVERYKD---------KNISVVAGIEARGFIFGPPIALAIG---AKFVP--MRKPKKLPGEVISEE  104 (182)
Q Consensus        39 l~~~~~~~~~~~~~la~~~~~---------~~~d~Iv~v~~~G~~~a~~la~~l~---vp~~~--~rk~~~~~~~~~~~~  104 (182)
                      ++.+++.++...+.||.++.+         .++.+++|+.+||+++|..+++.|.   .|...  ++..+...+      
T Consensus         7 ~l~t~e~I~~~i~~lA~qI~~~y~~~~~~~~~piviigIl~Gg~~fa~~L~~~L~~~~~~~~i~~i~~~sy~~~------   80 (183)
T d1pzma_           7 TLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGSG------   80 (183)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC-----------
T ss_pred             eEcCHHHHHHHHHHHHHHHHHHhhhhcccCCCCeEEEEEcCCccHHHHHHHHhccccCCceeEEEEEEeecccc------
Confidence            455788887777777776642         2456899999999999999999885   44422  221111000      


Q ss_pred             eeeeccceeEEEEc--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          105 YSLEYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       105 ~~~~~~~~~~~l~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                         ....+...+..  ....+||+||||||+++||.||..+++.|++.|++.+.+++++++.
T Consensus        81 ---~~~~~~~~~~~~~~~~~~gk~VLlVDDI~DTG~Tl~~~~~~l~~~~p~~v~~avL~~K~  139 (183)
T d1pzma_          81 ---VETSGQVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKP  139 (183)
T ss_dssp             -----------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECG
T ss_pred             ---cccCCceeecccCcchhccccEEEEeeeecccHHHHHHHHHHHhhCCcceeEEEEEEec
Confidence               00011111111  2347899999999999999999999999999999999999999975

>d1cjba_ c.61.1.1 (A:) Hypoxanthine-guanine PRTase (HGPRTase) {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine PRTase (HGPRTase)
species: Plasmodium falciparum [TaxId: 5833]

Probab=99.54  E-value=8.7e-15  Score=114.14  Aligned_cols=131  Identities=15%  Similarity=0.173  Sum_probs=92.2

Q ss_pred             EechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCC-CCc--eee-eeee
Q 030139           34 QDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKL-PGE--VIS-EEYS  106 (182)
Q Consensus        34 ~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~-~~~--~~~-~~~~  106 (182)
                      .|+..++.+.+.++.-.+.||.++.+   .+..++||+..||+++++.|++.|..++......-.. .+.  +.. ..+.
T Consensus        37 ~~~~~Vli~~~~I~~rI~rLA~eI~~~y~~~~~vivgIL~Gg~~Fa~dL~r~L~~~~~~~~~~~s~y~~~~~~~~~~~~~  116 (228)
T d1cjba_          37 KYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYC  116 (228)
T ss_dssp             GGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEEEEEEEEEEE
T ss_pred             ccccEEecCHHHHHHHHHHHHHHHHHHcCCCCeEEEEEccCCHHHHHHHHHHhccccccceeeeecccCceEEEEEEeec
Confidence            45777888999888888888877753   3567999999999999999999997554321111100 010  111 1111


Q ss_pred             eeccceeEEEEc--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          107 LEYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       107 ~~~~~~~~~l~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                      .+.......+..  ....+||+||||||+++||.||.++++.|++.|++.+.++|++.+.
T Consensus       117 ~~~~~~~~~~~~~~~~~i~gk~VLlVDDIlDTG~TL~~~~~~L~~~gp~sv~~avLldK~  176 (228)
T d1cjba_         117 NDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKR  176 (228)
T ss_dssp             TTEEEEEEEEEESCGGGGBTCEEEEEEEEESSSHHHHHHHHHHGGGCBSEEEEEEEEEEC
T ss_pred             CccccccceeecCChhhhCCceeEEecchhhHHHHHHHHHHHHHhhCcceeEEEEeeeec
Confidence            111112222222  2457899999999999999999999999999999999999999875

>d1ufra_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pyrimidine operon regulator PyrR
species: Thermus thermophilus [TaxId: 274]

Probab=99.51  E-value=2.8e-13  Score=101.67  Aligned_cols=118  Identities=19%  Similarity=0.203  Sum_probs=81.2

Q ss_pred             hcCHHHHHHHHHHHHHHhc----CCCccEEEeeCCCChhhHHHHHHHhC------CCeEeeeccCCCCCceeeeeeeeec
Q 030139           40 LLDTKAFRDTIDLFVERYK----DKNISVVAGIEARGFIFGPPIALAIG------AKFVPMRKPKKLPGEVISEEYSLEY  109 (182)
Q Consensus        40 ~~~~~~~~~~~~~la~~~~----~~~~d~Iv~v~~~G~~~a~~la~~l~------vp~~~~rk~~~~~~~~~~~~~~~~~  109 (182)
                      +.+.+.++...+.||.++.    +.++.+++|+..||+++|..+.+.+.      +|+....-....       .+..+.
T Consensus         7 l~s~~eI~~~I~rlA~qI~e~~~~~~~~vligI~~gg~~fa~~L~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~   79 (178)
T d1ufra_           7 LMNAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLYR-------DDLTEI   79 (178)
T ss_dssp             EEEHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC---------------
T ss_pred             ECCHHHHHHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHHHhhhhhcCCCcceEEEEeEEec-------cccccC
Confidence            3467777777777776553    45778999999999999999999873      344333211100       000001


Q ss_pred             cceeEEE--EccccCCCCeEEEEecccCchHHHHHHHHHHHhcC-CeEEEEEEEEecC
Q 030139          110 GKDVMEM--HVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP  164 (182)
Q Consensus       110 ~~~~~~l--~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~g-a~~v~v~~l~~~~  164 (182)
                      +...+..  ......+||+||||||+++||.||.++++.|.+.| ++.+.+++++++.
T Consensus        80 ~~~~~~~~~~~~~~i~gk~VLiVDDIlDTG~TL~~~~~~l~~~g~~~~i~~avL~dk~  137 (178)
T d1ufra_          80 GYRPQVRETRIPFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRG  137 (178)
T ss_dssp             ---CEEEEEEECSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred             CcceEEecccCccccCCCeEEEEEcccCcchHHHHHHHHHhhhCCCcEEEEEEEEcCC
Confidence            1111111  12345899999999999999999999999999998 7899999999984

>d1fsga_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine-xanthine PRTase
species: Toxoplasma gondii [TaxId: 5811]

Probab=99.49  E-value=5.2e-14  Score=110.02  Aligned_cols=130  Identities=17%  Similarity=0.145  Sum_probs=88.3

Q ss_pred             echhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCC---cee-eeeeee
Q 030139           35 DITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPG---EVI-SEEYSL  107 (182)
Q Consensus        35 d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~---~~~-~~~~~~  107 (182)
                      ++..++.+.+.++...+.||.++.+   .+..+++|+..||+++|..|++.|.............+-   .+. ...+..
T Consensus        44 ~i~~Ili~~~~I~~rI~rLA~eI~e~~~~k~~vlIgIl~Gg~~fa~~L~~~L~~~~~~~~~~~~i~~~~~~~~~~s~~~~  123 (233)
T d1fsga_          44 YIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPFFEHYVRLKSYQN  123 (233)
T ss_dssp             TCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSCSCEEEEEEEEEEET
T ss_pred             chhEEecCHHHHHHHHHHHHHHHHHHcCCCCeEEEEEecCCHHHHHHHHHHHHHhhcccccccccCcceeEEEEeeccCC
Confidence            4556788888888888888877643   355699999999999999999998421110000000000   000 011111


Q ss_pred             eccceeEEEEc--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139          108 EYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP  164 (182)
Q Consensus       108 ~~~~~~~~l~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~  164 (182)
                      ........+..  ....+||+||||||+++||.||.++++.|++.|++.+.+++++++.
T Consensus       124 ~~~~~~~~~~~~~~~~i~gk~VLlVDDIlDTG~TL~~~~~~L~~~gp~sv~~avLldK~  182 (233)
T d1fsga_         124 DNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKR  182 (233)
T ss_dssp             TEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEEC
T ss_pred             ccccccccccccChhhhcCceEEEeechhhHHHHHHHHHHHHHhhCcccccEEEEEEcC
Confidence            11111222222  2457899999999999999999999999999999999999999985

>d1a3ca_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pyrimidine operon regulator PyrR
species: Bacillus subtilis [TaxId: 1423]

Probab=99.48  E-value=1.8e-13  Score=102.78  Aligned_cols=121  Identities=17%  Similarity=0.258  Sum_probs=81.2

Q ss_pred             hhcCHHHHHHHHHHHHHHhc----CCCccEEEeeCCCChhhHHHHHHHhC----CCeEe--eeccCCCCCceeeeeeeee
Q 030139           39 LLLDTKAFRDTIDLFVERYK----DKNISVVAGIEARGFIFGPPIALAIG----AKFVP--MRKPKKLPGEVISEEYSLE  108 (182)
Q Consensus        39 l~~~~~~~~~~~~~la~~~~----~~~~d~Iv~v~~~G~~~a~~la~~l~----vp~~~--~rk~~~~~~~~~~~~~~~~  108 (182)
                      ++.+.+.++...+.||.++.    +.++.+++|+..||+++|..+.+.+.    .|+..  +.-.....     ..+...
T Consensus         4 il~~~~~I~~~i~rlA~qI~e~~~~~~~~vligvl~Gg~~f~~~L~~~L~~~~~~~~~~~~i~~~~~~~-----~~~~~~   78 (178)
T d1a3ca_           4 VILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRD-----DLSKKT   78 (178)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC------------
T ss_pred             EEeCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEecCccchHHHHHHHhhhhhcccceeeEeeeeeeeec-----cccccc
Confidence            56678888888888887764    24677899999999999999999984    44422  21111000     000000


Q ss_pred             ccceeEEE--EccccCCCCeEEEEecccCchHHHHHHHHHHHhc-CCeEEEEEEEEecC
Q 030139          109 YGKDVMEM--HVGAVQAGERALIVDDLVATGGTLSAAIRLLERV-GVHVVECACVIELP  164 (182)
Q Consensus       109 ~~~~~~~l--~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~-ga~~v~v~~l~~~~  164 (182)
                      .....+..  ..+...+||+||||||+++||.||.++++.|.+. +++.+.+++++++.
T Consensus        79 ~~~~~~~~~~~~~~~l~gk~VLIVDDIlDTG~TL~~~~~~l~~~~~p~~v~~avL~dk~  137 (178)
T d1a3ca_          79 SNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRG  137 (178)
T ss_dssp             -CCCCEEEEEECSSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred             cCCccEEecccCcccccCCEEEEEeeeeccCcHHHHHHHHHHhcCCCcEEEEEEEEcCC
Confidence            11111111  1234589999999999999999999999999875 58999999999984

>d1w30a_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pyrimidine operon regulator PyrR
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.48  E-value=1.9e-13  Score=103.01  Aligned_cols=118  Identities=19%  Similarity=0.210  Sum_probs=80.5

Q ss_pred             hcCHHHHHHHHHHHHHHhc-----------CCCccEEEeeCCCChhhHHHHHHHh----CCCeEe--eeccCCCCCceee
Q 030139           40 LLDTKAFRDTIDLFVERYK-----------DKNISVVAGIEARGFIFGPPIALAI----GAKFVP--MRKPKKLPGEVIS  102 (182)
Q Consensus        40 ~~~~~~~~~~~~~la~~~~-----------~~~~d~Iv~v~~~G~~~a~~la~~l----~vp~~~--~rk~~~~~~~~~~  102 (182)
                      +.+++.++...+.||.++.           +.+..+++|+..||+++|..+++.|    ++++..  ..-......    
T Consensus         5 l~s~~~I~~~I~rlA~qI~E~~~~~~~~~~~~~~~vliGIl~Gg~~fa~~L~~~L~~~~~~~~~~~~i~~~~y~~~----   80 (182)
T d1w30a_           5 LMSAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDD----   80 (182)
T ss_dssp             EECHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCCGGGCC-----
T ss_pred             cCCHHHHHHHHHHHHHHHHHhcccccccccCCCcEEEEEeccchHHHHHHHHHHHHhhccceeeEEEEeeeeeccc----
Confidence            4577778888888887762           1245589999999999999999988    554432  211110000    


Q ss_pred             eeeeeeccceeEEE--EccccCCCCeEEEEecccCchHHHHHHHHHHHhcC-CeEEEEEEEEecC
Q 030139          103 EEYSLEYGKDVMEM--HVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP  164 (182)
Q Consensus       103 ~~~~~~~~~~~~~l--~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~g-a~~v~v~~l~~~~  164 (182)
                       ..  ..+......  ......+||+||||||+++||.||.++++.|.+.| ++.+.+++++++.
T Consensus        81 -~~--~~~~~~~~~~~~~~~~l~gk~VLlVDDIlDTG~TL~~~~~~l~~~g~~~~v~~avLvdk~  142 (182)
T d1w30a_          81 -LM--IKPPRPLASTSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG  142 (182)
T ss_dssp             ----------CCCCCBCCTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred             -cc--cccccccccccccccccCCcEEEEEecccccCchHHHHHHHHHhcCCCCEEEEEEEEcCC
Confidence             00  000010100  11235789999999999999999999999999987 6789999999984

>d1dqna_ c.61.1.1 (A:) Guanine PRTase {Giardia lamblia [TaxId: 5741]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Guanine PRTase
species: Giardia lamblia [TaxId: 5741]

Probab=99.41  E-value=3.6e-14  Score=110.24  Aligned_cols=116  Identities=9%  Similarity=0.137  Sum_probs=85.3

Q ss_pred             hhcCHHHHHHHHHHHHHHhcC-----CCccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCceeeeeeeeeccc
Q 030139           39 LLLDTKAFRDTIDLFVERYKD-----KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLEYGK  111 (182)
Q Consensus        39 l~~~~~~~~~~~~~la~~~~~-----~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~~~~~~~~~~~~~  111 (182)
                      ++.+++.++..++.||.++.+     .++.++||+.+||+.++..+.+++++|+.+  ++-.          +|..+...
T Consensus        34 il~t~eeI~~~i~~lA~~I~e~Yk~~~~~~viI~VLkGg~~FaadL~r~L~~~~~idfi~vs----------SY~g~~~~  103 (230)
T d1dqna_          34 LLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVS----------SYKGTRQE  103 (230)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCE----------EEECSSCE
T ss_pred             EEecHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEccCcHHHHHHHHHhcCCCceEEEEEEE----------EcCCCccc
Confidence            677888888888888877653     366789999999999999999999999754  3211          22211111


Q ss_pred             eeEEEEc--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEE-EecC
Q 030139          112 DVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV-IELP  164 (182)
Q Consensus       112 ~~~~l~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l-~~~~  164 (182)
                      +...+..  ....+||+||||||+++||.||..+.+.|++.|++.+.++++ ..+.
T Consensus       104 ~~~~i~~~~~~~i~gk~VLIVDDIvDTG~TL~~l~~~L~~~~~~Sv~i~~l~l~K~  159 (230)
T d1dqna_         104 SVVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKHAKICSCFVKDVDAIKK  159 (230)
T ss_dssp             EEECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTTCEEEEEEESCHHHHHT
T ss_pred             CccceecccccccCCCceEEEehhhhhhHHHHHHHHHHhhcCCceEEEEEeecccc
Confidence            1121111  233679999999999999999999999999999998877665 3443

>d1gph11 c.61.1.1 (1:235-465) Glutamine PRPP amidotransferase, C-terminal domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Glutamine PRPP amidotransferase, C-terminal domain
species: Bacillus subtilis [TaxId: 1423]

Probab=99.41  E-value=3.7e-13  Score=104.32  Aligned_cols=117  Identities=18%  Similarity=0.213  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeee--ecc-ceeEEEEccc
Q 030139           44 KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSL--EYG-KDVMEMHVGA  120 (182)
Q Consensus        44 ~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~--~~~-~~~~~l~~~~  120 (182)
                      .....+|+.||+... .+.|+|+|+|.+|.+-|..+|+.+|+|+.....+.+..+.+.-.....  +.. +..+... ..
T Consensus        23 ~~R~~lG~~La~~~~-~~~diV~~vPds~~~~a~g~a~~~~ip~~~~~ikn~~~~RtFI~p~~~~R~~~v~~K~~~~-~~  100 (231)
T d1gph11          23 SARKNLGKMLAQESA-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAV-RG  100 (231)
T ss_dssp             HHHHHHHHHHHHHCC-CCCSEEECCTTTTHHHHHHHHHHHTCCBCCCEEECTTCSTTCCCCCHHHHHHTCCCSEEEC-HH
T ss_pred             HHHHHHHHHHhhhCC-CCCcEEEecCCcchhHHHHHHHHhCCchhhcceehhhhhhccCCCchHHHHHHHHHhhhhh-hh
Confidence            455689999998753 578999999999999999999999999965322221222211111000  000 1122221 24


Q ss_pred             cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEe
Q 030139          121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIE  162 (182)
Q Consensus       121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~  162 (182)
                      ..+||+|+||||.+-.|+|++..++.|+++||++|++.+...
T Consensus       101 ~i~gK~vvlVDDSIVRGtT~k~iv~~lr~aGakeVh~~i~sP  142 (231)
T d1gph11         101 VVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSP  142 (231)
T ss_dssp             HHTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESSC
T ss_pred             eeccCceEEeehhhhccchHHHHHHHHHHcCCCeEEEEeccc
Confidence            589999999999999999999999999999999999876543

>d1ecfa1 c.61.1.1 (A:250-492) Glutamine PRPP amidotransferase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Glutamine PRPP amidotransferase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=2.3e-12  Score=100.69  Aligned_cols=116  Identities=20%  Similarity=0.210  Sum_probs=81.9

Q ss_pred             HHHHHHHHHHHHHh----cCCCccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCc-eee--eeeeeeccceeE
Q 030139           44 KAFRDTIDLFVERY----KDKNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGE-VIS--EEYSLEYGKDVM  114 (182)
Q Consensus        44 ~~~~~~~~~la~~~----~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~-~~~--~~~~~~~~~~~~  114 (182)
                      +....+|+.||+.+    .+.+.|+|+++|..|++.|..+|+.+|+|+..  ++++.  .+. +..  +.-+...-+..+
T Consensus        24 ~~R~~lG~~La~~~~~~~~~~~~dvV~~vP~s~~~~a~g~a~~l~~p~~~~~ikn~~--~~RtfI~p~~~~R~~~v~~K~  101 (243)
T d1ecfa1          24 SARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRY--VGRTFIMPGQQLRRKSVRRKL  101 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECSC--CCCCCCCSSSCCCCCCSTTTE
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCccEEecccccchhhhHHHHHHcCChhhhhhhhccc--chhhhhCCcHHHHHHHHhhcc
Confidence            34557777777654    33578999999999999999999999999854  33221  111 111  110001111223


Q ss_pred             EEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEe
Q 030139          115 EMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIE  162 (182)
Q Consensus       115 ~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~  162 (182)
                      ... ....+||+|+||||.+-.|+|++..++.|+++||++|++.+-..
T Consensus       102 ~~~-~~~i~gk~vvlVDDSIVRGtT~k~iv~~L~~~gakeih~~i~sP  148 (243)
T d1ecfa1         102 NAN-RAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAP  148 (243)
T ss_dssp             EEC-GGGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSC
T ss_pred             ccc-hheeccceEEEEhhHHHhhhhHHHHHHHHHHcCCCeEEEEeccc
Confidence            322 34689999999999999999999999999999999999876543

>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 1394]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Bacillus caldolyticus [TaxId: 1394]

Probab=98.17  E-value=3.3e-06  Score=63.80  Aligned_cols=97  Identities=27%  Similarity=0.315  Sum_probs=67.5

Q ss_pred             EEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeecccee-EEEEccccCCCCeEEEEecccCchHHHH
Q 030139           64 VVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDV-MEMHVGAVQAGERALIVDDLVATGGTLS  141 (182)
Q Consensus        64 ~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~gk~VllVDDvitTG~Tl~  141 (182)
                      ++|++-+.|..+...+.+.+. .+...+--.+. +          +..+.. ++.+......+++|+|+|.++.||+|+.
T Consensus        72 ~~V~ILRAGl~m~~g~~~~~p~a~vg~Ig~~Rd-~----------~t~~p~~~y~klP~~i~~~~villDPmlATG~s~~  140 (208)
T d1i5ea_          72 GVIPILRAGIGMVDGILKLIPAAKVGHIGLYRD-P----------QTLKPVEYYVKLPSDVEERDFIIVDPMLATGGSAV  140 (208)
T ss_dssp             EEEEBTTGGGGGHHHHHHHCTTSEECEEEEECC-T----------TCSSCEEEEEECCTTTTTSEEEEECSEESSSHHHH
T ss_pred             eEeecccchhhHHHHHHHhCCCceeeeEEEeec-c----------CCCCcEEEeeecCcchhcCeEEEeChhHhcchhHH
Confidence            578888999999999998873 22221111110 0          001111 2223344578899999999999999999


Q ss_pred             HHHHHHHhcCCeEEEEEEEEecCCcccccccC
Q 030139          142 AAIRLLERVGVHVVECACVIELPELKGRERLG  173 (182)
Q Consensus       142 ~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~  173 (182)
                      .+++.|++.|++.+.+++++.-+  .|.+++.
T Consensus       141 ~ai~~L~~~G~~~I~~v~~iaa~--~Gi~~i~  170 (208)
T d1i5ea_         141 AAIDALKKRGAKSIKFMCLIAAP--EGVKAVE  170 (208)
T ss_dssp             HHHHHHHHTTCCCEEEECSEECH--HHHHHHH
T ss_pred             HHHHHHHhCCCCcEEEEEEeecH--HHHHHHH
Confidence            99999999999988888887754  5666654

>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Thermotoga maritima [TaxId: 2336]

Probab=98.13  E-value=9.5e-06  Score=61.30  Aligned_cols=98  Identities=20%  Similarity=0.283  Sum_probs=67.4

Q ss_pred             cEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeecccee-EEEEccccCCCCeEEEEecccCchHHH
Q 030139           63 SVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDV-MEMHVGAVQAGERALIVDDLVATGGTL  140 (182)
Q Consensus        63 d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~gk~VllVDDvitTG~Tl  140 (182)
                      -++|++-++|.++...+.+.+. .+...+.-.+. ++          ..+.. .+.+......++.|+|+|-++.||+|+
T Consensus        73 i~~V~ILRAGl~m~~g~~~~~p~a~vg~i~~~r~-~~----------t~~p~~yy~~lP~~i~~~~vil~DPmlATG~s~  141 (210)
T d1o5oa_          73 IVVVPILRAGLVMADGILELLPNASVGHIGIYRD-PE----------TLQAVEYYAKLPPLNDDKEVFLLDPMLATGVSS  141 (210)
T ss_dssp             EEEEEEETTHHHHHHHHHHHSTTCEECEEEEEEC-TT----------TCCEEEEEEECCCCCTTCEEEEECSEESSSHHH
T ss_pred             eEEEEEeccchhHHHHHHHhCCCceeeEEEEecc-CC----------CCCceeehhhCCccccCceEEEEhHHhhcCccH
Confidence            4788888999999999999873 23222111110 00          01111 122223446789999999999999999


Q ss_pred             HHHHHHHHhcCCeEEEEEEEEecCCcccccccC
Q 030139          141 SAAIRLLERVGVHVVECACVIELPELKGRERLG  173 (182)
Q Consensus       141 ~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~  173 (182)
                      ..+++.|++.|++.+.+++++.-+  .|.+++.
T Consensus       142 ~~ai~~L~~~g~~~I~~v~~ias~--~Gl~~i~  172 (210)
T d1o5oa_         142 IKAIEILKENGAKKITLVALIAAP--EGVEAVE  172 (210)
T ss_dssp             HHHHHHHHHTTCCEEEEECSEECH--HHHHHHH
T ss_pred             HHHHHHHHhCCCCcEEEEEEEEch--HHHHHHH
Confidence            999999999999988888877654  5666653

>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Thermus thermophilus [TaxId: 274]

Probab=97.89  E-value=1.2e-05  Score=60.65  Aligned_cols=97  Identities=26%  Similarity=0.372  Sum_probs=64.3

Q ss_pred             EEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeecccee-EEEEccccCCCCeEEEEecccCchHHHH
Q 030139           64 VVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDV-MEMHVGAVQAGERALIVDDLVATGGTLS  141 (182)
Q Consensus        64 ~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~gk~VllVDDvitTG~Tl~  141 (182)
                      ++|++-+.|..+...+.+.+. .+...+--.+. +          +..+.. .+.+......+++|+|+|.++.||+|+.
T Consensus        72 ~~V~ILRAGl~m~~g~~~~~p~a~ig~i~~~r~-~----------~t~~p~~~y~klP~~i~~~~vil~DPmlATG~s~~  140 (208)
T d1v9sa1          72 ALVAILRAGLVMVEGILKLVPHARVGHIGLYRD-P----------ESLNPVQYYIKLPPDIAERRAFLLDPMLATGGSAS  140 (208)
T ss_dssp             EEEEETTTHHHHHHHHHTTCTTCEEEEEEEC--------------------CEEEECCSCGGGSCEEEECSEESSSHHHH
T ss_pred             EEeeeeccchhHHHHHHHHCCCcceeeEEEEec-C----------CCCCcEEEEEecCcccccceEEEeCchhhcchhHH
Confidence            678888999888887777653 22222111111 0          001111 2222234467889999999999999999


Q ss_pred             HHHHHHHhcCCeEEEEEEEEecCCcccccccC
Q 030139          142 AAIRLLERVGVHVVECACVIELPELKGRERLG  173 (182)
Q Consensus       142 ~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~  173 (182)
                      .+++.|++.|++.+.+++++.-+  .|.+++.
T Consensus       141 ~ai~~L~~~gv~~I~~v~~ias~--~Gi~~v~  170 (208)
T d1v9sa1         141 LALSLLKERGATGVKLMAILAAP--EGLERIA  170 (208)
T ss_dssp             HHHHHHHHTTCCSCEEEEEEECH--HHHHHHH
T ss_pred             HHHHHHHhcCCCceEEEEEEecH--HHHHHHH
Confidence            99999999999988888887654  5666654

>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.83  E-value=1.3e-05  Score=61.16  Aligned_cols=97  Identities=18%  Similarity=0.215  Sum_probs=64.6

Q ss_pred             EEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeE-EEEccccCCCCeEEEEecccCchHHHH
Q 030139           64 VVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGTLS  141 (182)
Q Consensus        64 ~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VllVDDvitTG~Tl~  141 (182)
                      ++|++-+.|.++...+.+.+. .....+.-.+..           +..+..+ +.+......++.|+|+|.++.||+|+.
T Consensus        86 ~~V~ILRAGl~m~~g~~~~~p~a~~g~i~~~Rde-----------~t~~p~~~y~klP~~i~~~~vil~DPmLATG~S~~  154 (224)
T d1bd3a_          86 CGVSIVRAGESMESGLRAVCRGVRIGKILIQRDE-----------TTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVC  154 (224)
T ss_dssp             EEEEEETGGGGGHHHHHHHSTTCCEEEEEEEECT-----------TTCCEEEEEEECCTTGGGSEEEEECSEESSCHHHH
T ss_pred             EEEeeecccchhhhhHHhhCCCccceeeeecccc-----------CCCCceeeHhhCCCccccceEEEeChHHhcchHHH
Confidence            578888999999999988873 233222111110           0011111 222233467899999999999999999


Q ss_pred             HHHHHHHhcCCe--EEEEEEEEecCCcccccccC
Q 030139          142 AAIRLLERVGVH--VVECACVIELPELKGRERLG  173 (182)
Q Consensus       142 ~~~~~L~~~ga~--~v~v~~l~~~~~~~~~~~l~  173 (182)
                      .+++.|++.|+.  .+.+++++.-+  .|.+++.
T Consensus       155 ~ai~~L~~~g~~~~~I~~v~~iaa~--~Gi~~l~  186 (224)
T d1bd3a_         155 KAIEVLLRLGVKEERIIFVNILAAP--QGIERVF  186 (224)
T ss_dssp             HHHHHHHHTTCCGGGEEEEEEEECH--HHHHHHH
T ss_pred             HHHHHHHHcCCCcceEEEEEEEecH--HHHHHHH
Confidence            999999999986  36666666544  5666655

>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=97.65  E-value=0.0001  Score=55.67  Aligned_cols=103  Identities=12%  Similarity=0.129  Sum_probs=64.9

Q ss_pred             EEEeeCCCChhhHHHHHHHhC-CCeEeeeccC-CCCCceeeeeeeeeccceeEEE-Ecc-ccCCCCeEEEEecccCchHH
Q 030139           64 VVAGIEARGFIFGPPIALAIG-AKFVPMRKPK-KLPGEVISEEYSLEYGKDVMEM-HVG-AVQAGERALIVDDLVATGGT  139 (182)
Q Consensus        64 ~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~-~~~~~~~~~~~~~~~~~~~~~l-~~~-~~~~gk~VllVDDvitTG~T  139 (182)
                      ++|++.+.|......+.+.+. .+...+...+ ...+....     +.-+..++. +.. ...+.++|+|+|-++.||+|
T Consensus        73 ~~V~ILRAGl~m~~g~~~~~p~a~vg~ig~~r~~~~~~~~~-----~~~~~~~yy~klP~~~~~~~~VillDPmlATG~s  147 (215)
T d1xtta1          73 VIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVP-----KDMDVYIYYKKIPDIRAKVDNVIIADPMIATAST  147 (215)
T ss_dssp             EEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECCCCCSSCC-----SCCCEEEEEEECCCCCTTTCEEEEECSEESSSHH
T ss_pred             EEeechhhcccchHHHHhhCCCCceeeeeeEeccccccCCC-----cccceeeeeecCCCcccccceEEEeCchHhcchh
Confidence            788888999999888888873 2332221111 00000000     000111121 112 12345689999999999999


Q ss_pred             HHHHHHHHHhcCCeEEEEEEEEecCCcccccccC
Q 030139          140 LSAAIRLLERVGVHVVECACVIELPELKGRERLG  173 (182)
Q Consensus       140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~  173 (182)
                      +..+++.|++.|++.+.+++++.-+  .|.+++.
T Consensus       148 ~~~ai~~L~~~g~~~I~~~~~ias~--~Gi~~l~  179 (215)
T d1xtta1         148 MLKVLEEVVKANPKRIYIVSIISSE--YGVNKIL  179 (215)
T ss_dssp             HHHHHHHHGGGCCSEEEEECSEEEH--HHHHHHH
T ss_pred             HHHHHHHHhccCCCEEEEEEEEecH--HHHHHHH
Confidence            9999999999999988888887754  5666654

>d1dkua1 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Bacillus subtilis [TaxId: 1423]

Probab=93.61  E-value=0.41  Score=33.41  Aligned_cols=73  Identities=11%  Similarity=0.134  Sum_probs=46.8

Q ss_pred             CChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc-hH-H--HHHHHHH
Q 030139           71 RGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GG-T--LSAAIRL  146 (182)
Q Consensus        71 ~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT-G~-T--l~~~~~~  146 (182)
                      +.-.+|..+|+.||+++.....++...              +.++++....++|++|+||-..... -. -  +.-+++.
T Consensus         9 s~~~La~~ia~~Lg~~l~~~~~~~FpD--------------GE~~v~i~~~vrg~dv~ivqs~~~~~nd~lmelll~~~a   74 (159)
T d1dkua1           9 SNPELAKEIADIVGVQLGKCSVTRFSD--------------GEVQINIEESIRGCDCYIIQSTSDPVNEHIMELLIMVDA   74 (159)
T ss_dssp             SCHHHHHHHHHHHTCCCCCEEEEECTT--------------SCEEEEECSCCTTCEEEEECCCCSSHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCCccceEEEEcCC--------------CCEEEEeecCCCCCceEEEecCCCCcHHHHHHHHHHHHH
Confidence            446899999999999886554332211              2233333455889999999765442 11 1  2245678


Q ss_pred             HHhcCCeEEEE
Q 030139          147 LERVGVHVVEC  157 (182)
Q Consensus       147 L~~~ga~~v~v  157 (182)
                      +++.||+.+.+
T Consensus        75 ~k~~~A~~i~~   85 (159)
T d1dkua1          75 LKRASAKTINI   85 (159)
T ss_dssp             HHHTTCSEEEE
T ss_pred             HHHcCCcceEE
Confidence            88999987664

>d1u9ya1 c.61.1.2 (A:1-155) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Methanocaldococcus jannaschii [TaxId: 2190]

Probab=92.95  E-value=0.52  Score=32.72  Aligned_cols=74  Identities=9%  Similarity=0.094  Sum_probs=47.8

Q ss_pred             CCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHH---HHHHHH
Q 030139           70 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTL---SAAIRL  146 (182)
Q Consensus        70 ~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl---~~~~~~  146 (182)
                      ++.-.+|..+|+.||.++.....++..+            |  +.+++....+.|++|+|+=.....-.++   .-++++
T Consensus         7 s~~~~La~~ia~~lg~~l~~~~~~~F~D------------G--E~~v~i~~~vrg~~vvvi~s~~~~~d~lmelll~~da   72 (155)
T d1u9ya1           7 SQSQNLAFKVAKLLNTKLTRVEYKRFPD------------N--EIYVRIVDEINDDEAVIINTQKNQNDAIVETILLCDA   72 (155)
T ss_dssp             TTCHHHHHHHHHHTTCCEECEEEEECTT------------C--CEEEEECSCCCSSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhCCCceeeEEEEcCC------------C--CcceeeccccCCceeEEEecccccchHHHHHHHHHHH
Confidence            3556899999999999987654332212            2  2233334458899999997544433334   345667


Q ss_pred             HHhcCCeEEEE
Q 030139          147 LERVGVHVVEC  157 (182)
Q Consensus       147 L~~~ga~~v~v  157 (182)
                      +++.||+.+.+
T Consensus        73 ~~~~~a~~I~~   83 (155)
T d1u9ya1          73 LRDEGVKKITL   83 (155)
T ss_dssp             HHTTTCCEEEE
T ss_pred             HHHhCCcceEE
Confidence            88999986554

>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: PRPP synthetase-associated protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.27  E-value=0.3  Score=34.16  Aligned_cols=71  Identities=11%  Similarity=0.084  Sum_probs=45.6

Q ss_pred             hhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchH----HHHHHHHHHH
Q 030139           73 FIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGG----TLSAAIRLLE  148 (182)
Q Consensus        73 ~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~----Tl~~~~~~L~  148 (182)
                      -.+|..+|+.||+++.....++-.+            |  .+++.....++|+.|+||-.....-.    -+.-++++++
T Consensus        14 ~~LA~~ia~~Lg~~l~~~~~~~F~D------------G--E~~v~i~e~vrg~~V~ivqs~~~~~n~~lmeLll~~da~k   79 (160)
T d2c4ka1          14 TELAKRITERLGAELGKSVVYQETN------------G--ETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIMAYALK   79 (160)
T ss_dssp             THHHHHHHHHTTCCCCCEEEEECTT------------S--CEEEEECSCCTTCCEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCccceEEEECCC------------C--CeeeccCccccCCceEEEeccCcchHHHHHHHHHHHHHHH
Confidence            3699999999999886543322111            2  22333344588999999976654422    2233577888


Q ss_pred             hcCCeEEEE
Q 030139          149 RVGVHVVEC  157 (182)
Q Consensus       149 ~~ga~~v~v  157 (182)
                      +.||+.|.+
T Consensus        80 ~~~a~~It~   88 (160)
T d2c4ka1          80 TACARNIIG   88 (160)
T ss_dssp             HTTCSCEEE
T ss_pred             HhCccccee
Confidence            999986655

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=88.69  E-value=0.42  Score=31.13  Aligned_cols=29  Identities=34%  Similarity=0.502  Sum_probs=19.4

Q ss_pred             CCeEEEEecccCchHHHHHHHHHHHhcCCeEE
Q 030139          124 GERALIVDDLVATGGTLSAAIRLLERVGVHVV  155 (182)
Q Consensus       124 gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v  155 (182)
                      |||||||||--.....+   .+.|.+.|..++
T Consensus         1 GkrILivDD~~~~~~~l---~~~L~~~g~~v~   29 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMML---KDIITKAGYEVA   29 (118)
T ss_dssp             CCEEEEECSCHHHHHHH---HHHHHHTTCEEE
T ss_pred             CCEEEEEeCCHHHHHHH---HHHHHHcCCceE
Confidence            89999999965444443   445567776653

>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: Receiver domain of the ethylene receptor
domain: Receiver domain of the ethylene receptor
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.14  E-value=1.1  Score=29.71  Aligned_cols=30  Identities=23%  Similarity=0.312  Sum_probs=21.2

Q ss_pred             CCCCeEEEEecccCchHHHHHHHHHHHhcCCeE
Q 030139          122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHV  154 (182)
Q Consensus       122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~  154 (182)
                      .+|.|||||||--+....   ..+.|++.|..+
T Consensus         5 ~~g~rILvVDD~~~~~~~---l~~~L~~~G~~v   34 (134)
T d1dcfa_           5 FTGLKVLVMDENGVSRMV---TKGLLVHLGCEV   34 (134)
T ss_dssp             CTTCEEEEECSCHHHHHH---HHHHHHHTTCEE
T ss_pred             CCCCEEEEEeCCHHHHHH---HHHHHHHCCCEE
Confidence            579999999996554444   445667788754