Citrus Sinensis ID: 030166

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180--
Protein Sequence
MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLAVR
Secondary Structure (PSIPRED)
ccccccHHHHcccccEEEcccHHHHHHHHHHcccccccEEEEEcEEEEEccccccccEEEEEEccccccEEEEEEccccccEEEEccccccccccHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccccccccccccccHHHHHHHHHcccccccEEEEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHccHHHHHccccEEEcccHHHHHHHHHHHHcccccEEEEEEEEHHHcccccccccEEEEEcccccccEEEEEcccccccEEEcccccccccHHHHHHHHHHHHHHHHccccEEEEEEcHHHHcHHccccccccccccccccccHHHHHHHHHHHcccccEEEEEEcccccccccccccc
Coil and Loop (DISEMBL)
mdslydlelisetvpvildnsKIWYHVLMTSMKLGARGVAHVEGVsrvnlndnrrySNLLLINrtasplswfmeckdrknhsalmlphsflpsMAAEKLRDAADKIKALLVDYdsihvrrgdrlktrkdrygvdrslfphldrdtrpeAILCRiknwvppgrtlfiasnertpgffsplavr
Flexible Loop (DISEMBL)
MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEgvsrvnlndnrrysnLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALlvdydsihvrrgdrlktrkdrygvdrslfphldrdtrpeAILCriknwvppGRTLFiasnertpgffsplavr
Low Complexity Region (SEG)
MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLAVR
Disordered region (IsUnstruct)
***LYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASN*************
Disordered Region (DISOPRED)
*DSLYDLELISETVPVILDNSKIWYHVLMTSMKL**RGVAHVEGVSRVNLNDNRRYSNLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPL***
Disordered Region (DISEMBL)
MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLAVR
Disordered Region (DISPRO)
*DSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSP****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLAVR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	182
356502952	490	PREDICTED: uncharacterized protein LOC10	1.0	0.371	0.829	6e-84
255562306	405	conserved hypothetical protein [Ricinus	1.0	0.449	0.818	2e-83
356532437	385	PREDICTED: uncharacterized protein LOC10	1.0	0.472	0.824	7e-83
225440083	398	PREDICTED: uncharacterized protein LOC10	1.0	0.457	0.818	1e-82
449488232	407	PREDICTED: uncharacterized LOC101219097	1.0	0.447	0.796	1e-80
449453169	407	PREDICTED: uncharacterized protein LOC10	1.0	0.447	0.796	1e-80
224137678	322	predicted protein [Populus trichocarpa]	1.0	0.565	0.774	6e-79
15229000	403	uncharacterized protein [Arabidopsis tha	0.994	0.449	0.736	4e-72
297820444	403	hypothetical protein ARALYDRAFT_486114 [	0.994	0.449	0.736	4e-72
297824059	405	hypothetical protein ARALYDRAFT_483184 [	1.0	0.449	0.697	2e-70

>gi|356502952|ref|XP_003520278.1| PREDICTED: uncharacterized protein LOC100814636 [Glycine max]

 Score =  315 bits (806), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 151/182 (82%), Positives = 164/182 (90%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYD EL+S+TVPVILDNSK WY VL TSMKLGARGVAHVEGVSR  L +N RYS+LL
Sbjct: 237 MDSLYDTELMSDTVPVILDNSKEWYRVLSTSMKLGARGVAHVEGVSRFELKENSRYSDLL 296

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPLSWFMECKDR N SA+MLP+SFLPSMAA KLRDAA+KIKALL DYD+IHVRR
Sbjct: 297 LINRTASPLSWFMECKDRNNRSAIMLPYSFLPSMAAGKLRDAAEKIKALLGDYDAIHVRR 356

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD++KTRKDR+GV RSL PHLDRDTRPE +LCRI  WVPPGRTLFIASNERTPGFFSPL+
Sbjct: 357 GDKIKTRKDRFGVARSLHPHLDRDTRPEFMLCRIAKWVPPGRTLFIASNERTPGFFSPLS 416

Query: 181 VR 182
            R
Sbjct: 417 AR 418

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562306|ref|XP_002522160.1| conserved hypothetical protein [Ricinus communis] gi|223538598|gb|EEF40201.1| conserved hypothetical protein [Ricinus communis]

 Score =  313 bits (802), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 149/182 (81%), Positives = 167/182 (91%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYD++LISET+PVILDNSKIWY VL TSMKLG RG+AHVEGVSRV+L +N  YSNLL
Sbjct: 151 MDSLYDIDLISETIPVILDNSKIWYQVLSTSMKLGDRGIAHVEGVSRVDLKENSGYSNLL 210

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPLSWFMECKDR N SA++LP+SFLPSMAAEKLRDAADKIK LL DYD+IHVRR
Sbjct: 211 LINRTASPLSWFMECKDRNNRSAILLPYSFLPSMAAEKLRDAADKIKTLLGDYDAIHVRR 270

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD++KTRKDR+GV RSL PHLDRDTRP+ +L RI+ WVPPGRTLFIASNE+TPGFFSPL+
Sbjct: 271 GDKIKTRKDRFGVARSLHPHLDRDTRPDFMLLRIEKWVPPGRTLFIASNEKTPGFFSPLS 330

Query: 181 VR 182
           VR
Sbjct: 331 VR 332

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532437|ref|XP_003534779.1| PREDICTED: uncharacterized protein LOC100796131 [Glycine max]

 Score =  311 bits (797), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 150/182 (82%), Positives = 163/182 (89%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYD EL+S+TVPVILDNSK WY VL TSMKLGARGVAHV GVSR  L +N RYS+LL
Sbjct: 132 MDSLYDTELMSDTVPVILDNSKEWYRVLSTSMKLGARGVAHVGGVSRFELKENSRYSDLL 191

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPLSWFMECKDR N SA+MLP+SFLPSMAA KLRDAA+KIKALL DYD+IHVRR
Sbjct: 192 LINRTASPLSWFMECKDRNNGSAIMLPYSFLPSMAAGKLRDAAEKIKALLGDYDAIHVRR 251

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD++KTRKDR+GV RSL PHLDRDTRPE +LCRI  WVPPGRTLFIASNERTPGFFSPL+
Sbjct: 252 GDKIKTRKDRFGVVRSLHPHLDRDTRPEFMLCRIAKWVPPGRTLFIASNERTPGFFSPLS 311

Query: 181 VR 182
            R
Sbjct: 312 AR 313

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440083|ref|XP_002282555.1| PREDICTED: uncharacterized protein LOC100251727 [Vitis vinifera] gi|297741651|emb|CBI32783.3| unnamed protein product [Vitis vinifera]

 Score =  310 bits (795), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 149/182 (81%), Positives = 164/182 (90%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYDL+L+S TVPVILDNSK+WY VL TSMKLGARGVAHV GVSR+ L DN  YSNLL
Sbjct: 144 MDSLYDLDLMSNTVPVILDNSKMWYRVLSTSMKLGARGVAHVAGVSRIALRDNSHYSNLL 203

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPLSWFMECKDR N SA+MLP+SFLPSMAA+KLRDAA KIK LL DYD++HVRR
Sbjct: 204 LINRTASPLSWFMECKDRNNRSAIMLPYSFLPSMAAKKLRDAAGKIKVLLGDYDAMHVRR 263

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD++KTRKDR+GVDR+L PHLDRDTRPE IL RI+ WVPPGRTLFIASNERTPGFFSPL+
Sbjct: 264 GDKIKTRKDRFGVDRTLHPHLDRDTRPEFILRRIEKWVPPGRTLFIASNERTPGFFSPLS 323

Query: 181 VR 182
            R
Sbjct: 324 AR 325

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449488232|ref|XP_004157975.1| PREDICTED: uncharacterized LOC101219097 [Cucumis sativus]

 Score =  304 bits (778), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 145/182 (79%), Positives = 159/182 (87%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYD++LIS+TVPVILDNSK WY VL T MKLGAR V HVE VSR+ L D+ RYSNLL
Sbjct: 154 MDSLYDMDLISDTVPVILDNSKSWYQVLSTGMKLGARAVGHVEKVSRIELRDSSRYSNLL 213

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPLSWFMECKDR NHSA+MLP+ FLPSMAAE LRDAA+KIK LL DYD+IHVRR
Sbjct: 214 LINRTASPLSWFMECKDRNNHSAVMLPYKFLPSMAAENLRDAAEKIKGLLGDYDAIHVRR 273

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD++KTRKDR+GVDRSL PHLDRDTRPE +L RI  WVP GRTLFIASNER PGFFSPL+
Sbjct: 274 GDKIKTRKDRFGVDRSLHPHLDRDTRPEFMLKRIAKWVPAGRTLFIASNERIPGFFSPLS 333

Query: 181 VR 182
            R
Sbjct: 334 AR 335

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453169|ref|XP_004144331.1| PREDICTED: uncharacterized protein LOC101219097 [Cucumis sativus]

 Score =  303 bits (777), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 145/182 (79%), Positives = 159/182 (87%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYD++LIS+TVPVILDNSK WY VL T MKLGAR V HVE VSR+ L D+ RYSNLL
Sbjct: 154 MDSLYDMDLISDTVPVILDNSKSWYQVLSTGMKLGARAVGHVEKVSRIELRDSSRYSNLL 213

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPLSWFMECKDR NHSA+MLP+ FLPSMAAE LRDAA+KIK LL DYD+IHVRR
Sbjct: 214 LINRTASPLSWFMECKDRNNHSAVMLPYKFLPSMAAENLRDAAEKIKGLLGDYDAIHVRR 273

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD++KTRKDR+GVDRSL PHLDRDTRPE +L RI  WVP GRTLFIASNER PGFFSPL+
Sbjct: 274 GDKIKTRKDRFGVDRSLHPHLDRDTRPEFMLKRIAKWVPAGRTLFIASNERIPGFFSPLS 333

Query: 181 VR 182
            R
Sbjct: 334 AR 335

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137678|ref|XP_002322617.1| predicted protein [Populus trichocarpa] gi|222867247|gb|EEF04378.1| predicted protein [Populus trichocarpa]

 Score =  298 bits (763), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 141/182 (77%), Positives = 163/182 (89%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MD+LYD++LISETVPVILDNSK W+ VL TSM+LGARGVAHVEG+SR ++ +N  YSNLL
Sbjct: 141 MDTLYDMDLISETVPVILDNSKDWFRVLSTSMRLGARGVAHVEGISRADVKENSHYSNLL 200

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPLSWFMECKDR N  A+MLP+SFLP+MA++ LRDAADK+ ALL DYDS+HVRR
Sbjct: 201 LINRTASPLSWFMECKDRNNRGAIMLPYSFLPTMASQSLRDAADKVIALLGDYDSMHVRR 260

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD++KTRKDR+GV R+L PHLDRDTRPE IL RI+ WVPPGRTLFIASNE+T GFFSPLA
Sbjct: 261 GDKIKTRKDRFGVYRTLHPHLDRDTRPEFILHRIEKWVPPGRTLFIASNEKTTGFFSPLA 320

Query: 181 VR 182
           VR
Sbjct: 321 VR 322

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15229000|ref|NP_191234.1| uncharacterized protein [Arabidopsis thaliana] gi|9662994|emb|CAC00738.1| putative protein [Arabidopsis thaliana] gi|16648897|gb|AAL24300.1| putative protein [Arabidopsis thaliana] gi|20453219|gb|AAM19848.1| AT3g56750/T8M16_80 [Arabidopsis thaliana] gi|23197686|gb|AAN15370.1| putative protein [Arabidopsis thaliana] gi|332646040|gb|AEE79561.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  275 bits (704), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 134/182 (73%), Positives = 157/182 (86%), Gaps = 1/182 (0%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYD++LISE +PVILD+SK W+ VL TSMKLG RG+AHV GV+R  L ++  YSNLL
Sbjct: 148 MDSLYDIDLISEKIPVILDDSKTWHIVLSTSMKLGERGIAHVSGVTRHRLKESH-YSNLL 206

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           +INRTASPL+WF+ECKDR N SA+MLP+SFLP+MAA KLR+AA+KIKA L DYD+IHVRR
Sbjct: 207 IINRTASPLAWFVECKDRSNRSAVMLPYSFLPNMAAAKLRNAAEKIKAQLGDYDAIHVRR 266

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD+LKTRKDR+GV+R  FPHLDRDTRPE IL RI+  +P GRTLFI SNER PGFFSPLA
Sbjct: 267 GDKLKTRKDRFGVERIQFPHLDRDTRPEFILRRIEKRIPRGRTLFIGSNERKPGFFSPLA 326

Query: 181 VR 182
           VR
Sbjct: 327 VR 328

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820444|ref|XP_002878105.1| hypothetical protein ARALYDRAFT_486114 [Arabidopsis lyrata subsp. lyrata] gi|297323943|gb|EFH54364.1| hypothetical protein ARALYDRAFT_486114 [Arabidopsis lyrata subsp. lyrata]

 Score =  275 bits (704), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 134/182 (73%), Positives = 157/182 (86%), Gaps = 1/182 (0%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           MDSLYD++LISE +PVILD+SK W+ VL TSMKLG RG+AHV GVSR  L ++  YSNLL
Sbjct: 148 MDSLYDIDLISEKIPVILDDSKTWHIVLSTSMKLGERGIAHVSGVSRHRLKESH-YSNLL 206

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           +INRTASPL+WF+ECKDR N SA+MLP+SFLP+MAA KLR+AA+KIKA L DYD+IHVRR
Sbjct: 207 IINRTASPLAWFVECKDRSNRSAVMLPYSFLPNMAAAKLRNAAEKIKAQLGDYDAIHVRR 266

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD+LKTRKDR+GV+R  FPHLDRDTRPE IL RI+  +P GRTLFI SNER PGFFSPLA
Sbjct: 267 GDKLKTRKDRFGVERIQFPHLDRDTRPEFILRRIEKRIPRGRTLFIGSNERKPGFFSPLA 326

Query: 181 VR 182
           +R
Sbjct: 327 IR 328

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824059|ref|XP_002879912.1| hypothetical protein ARALYDRAFT_483184 [Arabidopsis lyrata subsp. lyrata] gi|297325751|gb|EFH56171.1| hypothetical protein ARALYDRAFT_483184 [Arabidopsis lyrata subsp. lyrata]

 Score =  270 bits (689), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 127/182 (69%), Positives = 155/182 (85%)

Query: 1   MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
           M+SLYD++LISE +PVILD+S+ W+ VL TSMKL  RG AHV G +R  LN++  ++NLL
Sbjct: 149 MESLYDIDLISEKIPVILDDSETWHIVLSTSMKLKERGSAHVYGANRNELNNSSHFTNLL 208

Query: 61  LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
           LINRTASPL+WF+ECKDR N S +MLP+SFLP+MAA +LRDAA+KIKA L  YD+IHVRR
Sbjct: 209 LINRTASPLAWFVECKDRGNRSDVMLPYSFLPNMAASRLRDAAEKIKAQLGVYDAIHVRR 268

Query: 121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
           GD+LKTRKDR+ V+R+ FPHLDRDTRPE I+ RI+  +PPGRTLFI SNERTPGFFSPLA
Sbjct: 269 GDKLKTRKDRFRVERTQFPHLDRDTRPEFIIGRIQKQIPPGRTLFIGSNERTPGFFSPLA 328

Query: 181 VR 182
           +R
Sbjct: 329 IR 330

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	182
TAIR|locus:2103640	403	AT3G56750 "AT3G56750" [Arabido	0.994	0.449	0.736	2.1e-68
TAIR|locus:2063192	404	AT2G41150 [Arabidopsis thalian	1.0	0.450	0.697	2e-65
TAIR|locus:2135773	561	AT4G12700 "AT4G12700" [Arabido	0.884	0.286	0.268	1e-09
TAIR|locus:2059767	568	AT2G04280 "AT2G04280" [Arabido	0.895	0.286	0.268	7.4e-09
TAIR|locus:2138228	552	SUB1 "AT4G08810" [Arabidopsis	0.873	0.288	0.273	2.5e-08

TAIR|locus:2103640 AT3G56750 "AT3G56750" [Arabidopsis thaliana (taxid:3702)]

 Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
 Identities = 134/182 (73%), Positives = 157/182 (86%)

Query:     1 MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
             MDSLYD++LISE +PVILD+SK W+ VL TSMKLG RG+AHV GV+R  L ++  YSNLL
Sbjct:   148 MDSLYDIDLISEKIPVILDDSKTWHIVLSTSMKLGERGIAHVSGVTRHRLKESH-YSNLL 206

Query:    61 LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
             +INRTASPL+WF+ECKDR N SA+MLP+SFLP+MAA KLR+AA+KIKA L DYD+IHVRR
Sbjct:   207 IINRTASPLAWFVECKDRSNRSAVMLPYSFLPNMAAAKLRNAAEKIKAQLGDYDAIHVRR 266

Query:   121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
             GD+LKTRKDR+GV+R  FPHLDRDTRPE IL RI+  +P GRTLFI SNER PGFFSPLA
Sbjct:   267 GDKLKTRKDRFGVERIQFPHLDRDTRPEFILRRIEKRIPRGRTLFIGSNERKPGFFSPLA 326

Query:   181 VR 182
             VR
Sbjct:   327 VR 328

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010050 "vegetative phase change" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2063192 AT2G41150 [Arabidopsis thaliana (taxid:3702)]

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 127/182 (69%), Positives = 154/182 (84%)

Query:     1 MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
             M+SLYD++LISE +PVILD+S+ W+ +L TSMKL  RG AHV G +R  LND+  ++NLL
Sbjct:   148 MESLYDIDLISEKIPVILDDSETWHIMLSTSMKLKERGSAHVYGANRHELNDSSDFTNLL 207

Query:    61 LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
             LINRTASPL+WF+ECKDR N S +MLP+SFL +MAA +LRDAA+KIKA L DYD+IHVRR
Sbjct:   208 LINRTASPLAWFVECKDRGNRSDVMLPYSFLQTMAASRLRDAAEKIKAKLGDYDAIHVRR 267

Query:   121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
             GD+LKTRKDR+ V+RS FPHLDRDTRPE I+ RI+  +PPGRTLFI SNERTP FFSPLA
Sbjct:   268 GDKLKTRKDRFRVERSQFPHLDRDTRPEFIIGRIQKQIPPGRTLFIGSNERTPDFFSPLA 327

Query:   181 VR 182
             +R
Sbjct:   328 IR 329

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2135773 AT4G12700 "AT4G12700" [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 48/179 (26%), Positives = 88/179 (49%)

Query:     5 YDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINR 64
             +D E + E   + LD  + W        K G +   H+    RV         + L++ +
Sbjct:   318 FDFEHLKEAASM-LDQVQFWADWGKWYKKNGLK--LHLVEDFRVTPMKLVDVKDTLIMRK 374

Query:    65 --TASPLS-WFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLV-DYDSIHVRR 120
               T  P + W+  C+  +  S +  P + L    +++L +    I + L  DYD+IH+ R
Sbjct:   375 FGTVEPDNYWYRVCEG-ETESVVQRPWNLL--WKSKRLMEIVSAIASRLNWDYDAIHIER 431

Query:   121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPL 179
             GD+ + ++        ++P+L++DT P +IL  +++ +  GR L+IA+NE    FF+PL
Sbjct:   432 GDKARNKE--------VWPNLEKDTSPSSILSTLQDKIEQGRNLYIATNEPELSFFNPL 482

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2059767 AT2G04280 "AT2G04280" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 7.4e-09, P = 7.4e-09
 Identities = 48/179 (26%), Positives = 84/179 (46%)

Query:     5 YDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINR 64
             +D E + E   V LD ++ W        K   R   H+    RV         + L++ +
Sbjct:   323 FDFEHLKEAASV-LDEAQFWAQWGKLRKKRRNRLNLHLVEDFRVTPMKLAAVKDTLIMRK 381

Query:    65 TAS--PLS-WFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLV-DYDSIHVRR 120
               S  P + W+  C+     S +  P   L    + +L +    I + L  DYD++H+ R
Sbjct:   382 FGSVEPDNYWYRVCEGDAE-SVVKRPWHLL--WKSRRLMEIVSAIASRLNWDYDAVHIER 438

Query:   121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPL 179
             G++ + ++        ++P+L+ DT P A+L  +++ V  GR L+IA+NE    FF+PL
Sbjct:   439 GEKARNKE--------VWPNLEADTSPSALLSTLQDKVEEGRHLYIATNEGELSFFNPL 489

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0007020 "microtubule nucleation" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2138228 SUB1 "AT4G08810" [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 50/183 (27%), Positives = 88/183 (48%)

Query:     5 YDLELISETVPVI-----LDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNL 59
             +D E + ET  ++     L + K W    +   K+  R V     VS + L+ ++  S +
Sbjct:   312 FDFEHLKETASIVEEGEFLRDWKKWNR--LHKRKVPVRKVK-THRVSPLQLSKDK--STI 366

Query:    60 LLIN-RTASPLS-WFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLV-DYDSI 116
             +     T  P + W+  C+ + +       H+   S   ++L +   +I   +  D+D++
Sbjct:   367 IWRQFDTPEPENYWYRVCEGQASKYVERPWHALWKS---KRLMNIVSEISGKMDWDFDAV 423

Query:   117 HVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFF 176
             HV RG++ K +K        L+PHLD DT P+AIL ++K  V   R L++A+NE    +F
Sbjct:   424 HVVRGEKAKNKK--------LWPHLDADTWPDAILTKLKGLVQVWRNLYVATNEPFYNYF 475

Query:   177 SPL 179
               L
Sbjct:   476 DKL 478


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.137   0.416    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      182       182   0.00098  109 3  11 22  0.39    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  163 KB (2096 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.04u 0.11s 16.15t   Elapsed:  00:00:00
  Total cpu time:  16.04u 0.11s 16.15t   Elapsed:  00:00:00
  Start:  Fri May 10 11:28:00 2013   End:  Fri May 10 11:28:00 2013

GO:0008150 "biological_process" evidence=ND

GO:0005509 "calcium ion binding" evidence=IDA

GO:0042175 "nuclear outer membrane-endoplasmic reticulum membrane network" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	182
PF10250	351	O-FucT: GDP-fucose protein O-fucosyltransferase; I	96.63
PF01531	298	Glyco_transf_11: Glycosyl transferase family 11; I	80.47

>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats

Probab=96.63  E-value=0.0021  Score=54.37  Aligned_cols=79  Identities=23%  Similarity=0.282  Sum_probs=40.9

Q ss_pred             cchHHHHHHHHHHHHHh----cCCceEEeecC-ccccccccccc----------------------cccccCCCCCCCCC
Q 030166           94 MAAEKLRDAADKIKALL----VDYDSIHVRRG-DRLKTRKDRYG----------------------VDRSLFPHLDRDTR  146 (182)
Q Consensus        94 ~~a~rLm~iv~~I~~~l----~DfDavHVrRG-dk~~~rk~r~g----------------------~~r~l~P~LD~DT~  146 (182)
                      ..++.++++|+++..++    +.|=|||+|+| |. .+. -.++                      ......|.      
T Consensus       174 ~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~-~~~-C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------  245 (351)
T PF10250_consen  174 RFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDW-FSA-CEFKGERHLLASPRCWGKKSINPEKKRRNGCCPS------  245 (351)
T ss_dssp             -B-HHHHHHHHHHHHHH----SSEEEEEE--SHHH-HHH-HCT-T----TTTHHHH-GGGTT-----HHHHS--------
T ss_pred             ecCHHHHHHHHHHHHHhhcccCceEEEeecccCch-Hhh-cccCCchHHHHHhHhhccccccchhhhhcCCCCC------
Confidence            57889999999998876    39999999999 87 100 0000                      00111232      


Q ss_pred             HHHHHHHhhccc--CCCceEEEecCCCCc--CCCCCCC
Q 030166          147 PEAILCRIKNWV--PPGRTLFIASNERTP--GFFSPLA  180 (182)
Q Consensus       147 pe~il~ri~~~v--~~GR~lYIAtnE~~~--~fFdpLk  180 (182)
                      .+.+...|++.+  ...++|||||++...  ..+++|+
T Consensus       246 ~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~  283 (351)
T PF10250_consen  246 TPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLK  283 (351)
T ss_dssp             HHHHHHHHHHHHHHHT-SEEEEEESS-----------H
T ss_pred             hHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHH
Confidence            344555555555  345999999999532  3556554

Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=80.47  E-value=3.2  Score=35.75  Aligned_cols=50  Identities=22%  Similarity=0.298  Sum_probs=31.1

Q ss_pred             CCceEEeecCccccccccccccccccCCCCCCCCCHHHH---HHHhhcccCCCceEEEecCCC
Q 030166          112 DYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAI---LCRIKNWVPPGRTLFIASNER  171 (182)
Q Consensus       112 DfDavHVrRGdk~~~rk~r~g~~r~l~P~LD~DT~pe~i---l~ri~~~v~~GR~lYIAtnE~  171 (182)
                      ..=+|||||||.......     +..++-.|    ++..   ++.+++.+ +.-++||.||+.
T Consensus       164 ~~V~VHIRRGDy~~~~~~-----~~~~~~~~----~~Yy~~Ai~~i~~~~-~~~~f~ifSDD~  216 (298)
T PF01531_consen  164 NSVCVHIRRGDYVSNGNH-----NWKHGICD----KDYYKKAIEYIREKV-KNPKFFIFSDDI  216 (298)
T ss_pred             CeEEEEEEchhccccccc-----cccCCCCC----HHHHHHHHHHHHHhC-CCCEEEEEcCCH
Confidence            556899999998876521     11233333    3444   34455554 356899999975

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 11 GT11 from CAZY comprises enzymes with only one known activity; galactoside 2-L-fucosyltransferase (2.4.1.69 from EC). Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 2-L-fucosyltransferase 1 (2.4.1.69 from EC) and Galactoside 2-L-fucosyltransferase 2 (2.4.1.69 from EC) belong to the Hh blood group system and are associated with H/h and Se/se antigens.; GO: 0008107 galactoside 2-alpha-L-fucosyltransferase activity, 0005975 carbohydrate metabolic process, 0016020 membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	182
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 5e-07
 Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 37/164 (22%)

Query: 16  VILDN---SKIWYH------VLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINRTA 66
           ++L N   +K W        +L+T+              + ++L+ +   S  L  +   
Sbjct: 248 LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH---SMTLTPDEVK 304

Query: 67  SPLSWFMECKDRKNHSALMLPHS------FLPSMAAEKLRDAADKIKALL-VDYDSI-HV 118
           S L  +++C+ +       LP           S+ AE +RD          V+ D +  +
Sbjct: 305 SLLLKYLDCRPQD------LPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358

Query: 119 RRG--DRLKTR--KDRYGVDRSLFPHLDRDTR-PEAILCRIKNW 157
                + L+    +  +    S+FP        P  +L  I  W
Sbjct: 359 IESSLNVLEPAEYRKMF-DRLSVFP---PSAHIPTILLSLI--W 396

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	182
4ap5_A	408	GDP-fucose protein O-fucosyltransferase 2; GT-B, G	98.01
3zy2_A	362	Putative GDP-fucose protein O-fucosyltransferase;	95.88
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	93.62
2hhc_A	330	NODZ, nodulation fucosyltransferase NODZ; glycosyl	82.9

>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A*

Probab=98.01  E-value=1.7e-05  Score=68.49  Aligned_cols=68  Identities=21%  Similarity=0.349  Sum_probs=48.2

Q ss_pred             chHHHHHHHHHHHHHh----------------------------cCCceEEeecCccccccccccccccccCCCCCCCCC
Q 030166           95 AAEKLRDAADKIKALL----------------------------VDYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTR  146 (182)
Q Consensus        95 ~a~rLm~iv~~I~~~l----------------------------~DfDavHVrRGdk~~~rk~r~g~~r~l~P~LD~DT~  146 (182)
                      +++.|+++|+......                            |.|.++|+||||++..++       ...|      +
T Consensus       221 ~s~~l~~~a~~fi~~~L~~~~~~~h~r~~~dw~~~~~~~~~~~~~~y~~~H~Rr~d~~~~~~-------~~~p------s  287 (408)
T 4ap5_A          221 FARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIWGHR-------QDVP------S  287 (408)
T ss_dssp             BCHHHHHHHHHHHHHHHCCCTTTTTCCCCSSGGGCCCCTTCBCCEEEEEEEECCTTTTTTTC-------SSSC------C
T ss_pred             hhHHHHHHHHHHHHHHhCcccceeecccchhHhhhhcccccccCCCccccccccccchhhhh-------ccCC------C
Confidence            6889999998866532                            378999999999887652       2233      3


Q ss_pred             HHHHHHHhhcccC--CCceEEEecCCCCcCC
Q 030166          147 PEAILCRIKNWVP--PGRTLFIASNERTPGF  175 (182)
Q Consensus       147 pe~il~ri~~~v~--~GR~lYIAtnE~~~~f  175 (182)
                      -+.+.+.|++.+.  ..+.||||||+....+
T Consensus       288 ~~~~~~~i~~~~~~~~~~~VyiATD~~~~~~  318 (408)
T 4ap5_A          288 LEGAVRKIRSLMKTHRLDKVFVATDAVRKEY  318 (408)
T ss_dssp             HHHHHHHHHHHHHHHTCSCEEEEECCCHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEeCCCchhHH
Confidence            4566666666553  5679999999866543

>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A*

Probab=95.88  E-value=0.0095  Score=53.59  Aligned_cols=76  Identities=22%  Similarity=0.303  Sum_probs=51.3

Q ss_pred             cchHHHHHHHHH-HHHHhc-CCceEEeecC-ccccccccccccccccCCCCC-----------CC--------CCHHHHH
Q 030166           94 MAAEKLRDAADK-IKALLV-DYDSIHVRRG-DRLKTRKDRYGVDRSLFPHLD-----------RD--------TRPEAIL  151 (182)
Q Consensus        94 ~~a~rLm~iv~~-I~~~l~-DfDavHVrRG-dk~~~rk~r~g~~r~l~P~LD-----------~D--------T~pe~il  151 (182)
                      -+|+.+++.+++ |++-|+ .|=+||.|+| |...-=   -.+...--|||=           ++        -+.+.|+
T Consensus       192 ~WS~~i~~~a~~fI~~~L~rpyVgIHLR~G~DW~~aC---~hlk~~~~~~lfaSPQC~Gy~~~~~~lt~emClPSle~I~  268 (362)
T 3zy2_A          192 RWSSRITEQAKKFISANLAKPFVAVHLRNDADWVRVC---EHIDTTTNRPLFASEQCLGEGHHLGTLTKEICSPSKQQIL  268 (362)
T ss_dssp             CBCHHHHHHHHHHHHHHCCSSEEEEEECCCHHHHHHH---HTCCTTTCCCCTTTHHHHCGGGTTCCCCHHHHSCCHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCeEEEEEecCCcHHHHH---hhhccccCcccccCCcccCCcccCcccchhccCCCHHHHH
Confidence            478999999999 666686 9999999999 654110   000000022221           11        1668899


Q ss_pred             HHhhcccC--CCceEEEecCCCC
Q 030166          152 CRIKNWVP--PGRTLFIASNERT  172 (182)
Q Consensus       152 ~ri~~~v~--~GR~lYIAtnE~~  172 (182)
                      ++|++++.  .-++||||||...
T Consensus       269 rqIk~~vk~~~lksVFIATDa~~  291 (362)
T 3zy2_A          269 EQIVEKVGSIGAKSVFVASDKDH  291 (362)
T ss_dssp             HHHHHHHHHHTCSEEEEEESSCC
T ss_pred             HHHHHHHHhcCCcEEEEecCCHH
Confidence            99998885  6799999999753

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}

Probab=93.62  E-value=0.1  Score=47.85  Aligned_cols=63  Identities=17%  Similarity=0.347  Sum_probs=38.3

Q ss_pred             chHHHHHHHHHHHHHh--c-CCceEEeecCccccccccccccccccCCCCCCCCCHHHHHHHhhc--------ccCCCce
Q 030166           95 AAEKLRDAADKIKALL--V-DYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKN--------WVPPGRT  163 (182)
Q Consensus        95 ~a~rLm~iv~~I~~~l--~-DfDavHVrRGdk~~~rk~r~g~~r~l~P~LD~DT~pe~il~ri~~--------~v~~GR~  163 (182)
                      ..+.+.+.+++..+.+  + ..=+||||||||...       |...+|-       +..+..+++        .-+.-+.
T Consensus       276 P~~~i~~~I~~~~~~l~~~~piVGVHIRrGDk~~~-------E~~~~~~-------~~Y~~~v~~~~~~l~~~~~~~~~~  341 (526)
T 2de0_X          276 PQPWLEKEIEEATKKLGFKHPVIGVHVRRTDKVGT-------EAAFHPI-------EEYMVHVEEHFQLLARRMQVDKKR  341 (526)
T ss_dssp             BCHHHHHHHHHHHHHHTCCSSEEEEEECCC------------CCCSCSH-------HHHHHHHHHHHHHHHTTSCCSSCE
T ss_pred             CCHHHHHHHHHHHHHhCCCCCEEEEEEeCCCCCcc-------ccccCCH-------HHHHHHHHHHHHHHHhhcCCCCCe
Confidence            3566777777777776  3 577999999998532       2344442       333334333        2367899


Q ss_pred             EEEecCCC
Q 030166          164 LFIASNER  171 (182)
Q Consensus       164 lYIAtnE~  171 (182)
                      +|||||.+
T Consensus       342 ifLATDDp  349 (526)
T 2de0_X          342 VYLATDDP  349 (526)
T ss_dssp             EEEEESCH
T ss_pred             EEEEcCCH
Confidence            99999964

>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A*

Probab=82.90  E-value=1.9  Score=35.44  Aligned_cols=71  Identities=11%  Similarity=0.163  Sum_probs=34.9

Q ss_pred             chHHHHHHHHHHHHH-hc--CCceEEeecCccccccccccccccccCCCCCCCCCHHHHHHHhhccc---C-CCceEEEe
Q 030166           95 AAEKLRDAADKIKAL-LV--DYDSIHVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWV---P-PGRTLFIA  167 (182)
Q Consensus        95 ~a~rLm~iv~~I~~~-l~--DfDavHVrRGdk~~~rk~r~g~~r~l~P~LD~DT~pe~il~ri~~~v---~-~GR~lYIA  167 (182)
                      +++.+...++++... +.  .+=+|||||||....-  ..+.   -|.+.  ...-|.+.+.|++..   + ..+.+|||
T Consensus       150 p~~~i~~~i~~~~~~~~~~~~~VGVHIRrgD~~~~~--~~~~---~~~~~--~~~l~~~~~~i~~~~~~~~~~~~~vfva  222 (330)
T 2hhc_A          150 LRSEIRARIDALYEEHFSGHSIIGVHVRHGNGEDIM--EHAP---YWADS--ELALHQVCMAIRKAKALSYPKPVKVFLC  222 (330)
T ss_dssp             BCHHHHHHHHHHHHHHTTTSEEEEEEECC-----------------CHHH--HHHHHHHHHHHHHHHTSCCSSCEEEEEE
T ss_pred             ccHHHHHHHHHHHHHhccCCceEEEEEecCCCCccc--ccCc---chHHH--hHHHHHHHHHHHHHHhccCcCceEEEEE
Confidence            445666677776644 33  3558999999942211  0000   00000  001355666665543   2 35899999


Q ss_pred             cCCCC
Q 030166          168 SNERT  172 (182)
Q Consensus       168 tnE~~  172 (182)
                      ||.+.
T Consensus       223 SDd~~  227 (330)
T 2hhc_A          223 TDSAQ  227 (330)
T ss_dssp             ESCHH
T ss_pred             eCCHH
Confidence            99763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00