Citrus Sinensis ID: 030270

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Protein Sequence
MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPLQ
Secondary Structure (PSIPRED)
ccccccccccccccEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcHHHcccHHHHHHHHccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHcccccccEEEccccEEcc
Coil and Loop (DISEMBL)
mekgkgvmgsgrrwavdftdnsttpstrdiadppgfsrasqdqddstlsRQKKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQpisalqgvgkvfepykdskvdllgpKLLFIALNLGGLALGVWklntlgllpthasdwvsslppaleveysgggiplq
Flexible Loop (DISEMBL)
mekgkgvmgsgrrwavdftdnsttpstrdiadppgfsrasqdqddstLSRQKKdaeanwksqkawEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPLQ
Low Complexity Region (SEG)
MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLmmmgfmmwmAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPLQ
Disordered region (IsUnstruct)
**************************************************************KAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPAL************
Disordered Region (DISOPRED)
**************************************************************KAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL*
Disordered Region (DISEMBL)
**********GRRWAVDFTD********DIADPPGF***************************AWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPLQ
Disordered Region (DISPRO)
***********RRW**DFTD*********************************DAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPLQ
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPLQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	180	2.2.26 [Sep-21-2011]
Q6GR43	180	ER membrane protein compl	N/A	no	0.922	0.922	0.355	3e-20
Q6PBF7	180	ER membrane protein compl	yes	no	0.922	0.922	0.35	8e-20
Q6P011	189	ER membrane protein compl	yes	no	0.877	0.835	0.327	2e-19
Q5RC35	183	ER membrane protein compl	yes	no	0.655	0.644	0.386	5e-19
Q9CZX9	183	ER membrane protein compl	yes	no	0.655	0.644	0.386	5e-19
Q5J8M3	183	ER membrane protein compl	yes	no	0.655	0.644	0.386	5e-19
Q3T0K8	183	ER membrane protein compl	yes	no	0.655	0.644	0.386	5e-19
B5XB24	188	ER membrane protein compl	N/A	no	0.8	0.765	0.324	2e-17
O94520	193	ER membrane protein compl	yes	no	0.65	0.606	0.322	6e-14
P53073	190	ER membrane protein compl	yes	no	0.811	0.768	0.253	2e-10

>sp|Q6GR43|EMC4_XENLA ER membrane protein complex subunit 4 OS=Xenopus laevis GN=emc4 PE=2 SV=1

 Score = 97.8 bits (242), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 14/180 (7%)

Query: 7   VMGSGRR--WAVDFTDNSTTPST-----RDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
           V   GRR  WA++F    +         +D   P G+S    D+     S Q+ D     
Sbjct: 8   VTNRGRRFKWAIEFGSGGSRGRGERGGLQDSMYPVGYS----DKQVPDTSVQESDHILVE 63

Query: 60  KSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
           K  + W++A  P K + M  F+M+MAG+T+ +F I +     W+PI AL      F+  +
Sbjct: 64  K--RCWDIALGPLKQIPMNLFIMYMAGNTISIFPIMMVCMMAWRPIQALLATPATFKLLE 121

Query: 120 DSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
            S    L   L+++  NL GLALGV+K  ++GLLPTHASDW++ + P   +EY+GGG  L
Sbjct: 122 SSGQRFLQ-GLVYLIGNLLGLALGVYKCQSMGLLPTHASDWLAFIEPPERMEYTGGGFLL 180

May mediate anti-apoptotic activity.
Xenopus laevis (taxid: 8355)

>sp|Q6PBF7|EMC4_XENTR ER membrane protein complex subunit 4 OS=Xenopus tropicalis GN=emc4 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 14/180 (7%)

Query: 7   VMGSGRR--WAVDFTDNSTTPST-----RDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
           V   GRR  WA++F    +         +D   P G+S    D+     S Q+ D     
Sbjct: 8   VANRGRRFKWAIEFGSGGSRGRGERGGLQDSMYPVGYS----DKQVPDTSVQESDHILVE 63

Query: 60  KSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
           K  + W++A  P K + M  F+M+MAG+T+ +F I +     W+PI AL      F+  +
Sbjct: 64  K--RCWDIALGPLKQIPMNLFIMYMAGNTISIFPIMMVCMMAWRPIQALLATPATFKLLE 121

Query: 120 DSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
            S    L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +EY+GGG+ L
Sbjct: 122 SSGQRFLQ-GLVYLIGNLLGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEYTGGGLLL 180

May mediate anti-apoptotic activity.

Xenopus tropicalis (taxid: 8364)

>sp|Q6P011|EMC4_DANRE ER membrane protein complex subunit 4 OS=Danio rerio GN=emc4 PE=2 SV=1

 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 13/171 (7%)

Query: 13  RWAVDFT-DNSTTPSTR-----DIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWE 66
           +WAV+ +  NS + S R     D+  P G+S      D        ++A+ N   ++ W+
Sbjct: 24  KWAVELSLGNSRSRSDRQGKDGDVMYPVGYS------DKPVPDTSVQEADRNLVEKRCWD 77

Query: 67  VAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLL 126
           VA  P K + M  F+M+M+G+T+ +F I +     W+PI AL  +   F+  + S    L
Sbjct: 78  VALGPLKQIPMNLFIMYMSGNTISIFPIMMVCMMAWRPIQALMSMSATFKLLESSSQQWL 137

Query: 127 GPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGI 177
              L+++  NL G AL ++K  ++GLLPTH+SDW++ + P   +E  GGG+
Sbjct: 138 -QGLVYLIGNLLGSALAIYKCQSMGLLPTHSSDWLAFIEPPQRLEIMGGGM 187

May mediate anti-apoptotic activity.

Danio rerio (taxid: 7955)

>sp|Q5RC35|EMC4_PONAB ER membrane protein complex subunit 4 OS=Pongo abelii GN=EMC4 PE=2 SV=1

 Score = 94.0 bits (232), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 73/119 (61%), Gaps = 1/119 (0%)

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
            ++ W++A  P K + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + 
Sbjct: 66  EKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLES 125

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
           S    L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +E+SGGG+ L
Sbjct: 126 SSQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

May mediate anti-apoptotic activity.

Pongo abelii (taxid: 9601)

>sp|Q9CZX9|EMC4_MOUSE ER membrane protein complex subunit 4 OS=Mus musculus GN=Emc4 PE=2 SV=1

 Score = 94.0 bits (232), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 73/119 (61%), Gaps = 1/119 (0%)

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
            ++ W++A  P K + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + 
Sbjct: 66  EKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLES 125

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
           S    L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +E+SGGG+ L
Sbjct: 126 SSQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

May mediate anti-apoptotic activity.

Mus musculus (taxid: 10090)

>sp|Q5J8M3|EMC4_HUMAN ER membrane protein complex subunit 4 OS=Homo sapiens GN=EMC4 PE=1 SV=2

 Score = 94.0 bits (232), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 73/119 (61%), Gaps = 1/119 (0%)

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
            ++ W++A  P K + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + 
Sbjct: 66  EKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLES 125

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
           S    L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +E+SGGG+ L
Sbjct: 126 SSQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

May mediate anti-apoptotic activity.

Homo sapiens (taxid: 9606)

>sp|Q3T0K8|EMC4_BOVIN ER membrane protein complex subunit 4 OS=Bos taurus GN=EMC4 PE=2 SV=1

 Score = 94.0 bits (232), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 73/119 (61%), Gaps = 1/119 (0%)

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
            ++ W++A  P K + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + 
Sbjct: 66  EKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLES 125

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
           S    L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +E+SGGG+ L
Sbjct: 126 SSQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

May mediate anti-apoptotic activity.

Bos taurus (taxid: 9913)

>sp|B5XB24|EMC4_SALSA ER membrane protein complex subunit 4 OS=Salmo salar GN=emc4 PE=2 SV=1

 Score = 88.6 bits (218), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 7/151 (4%)

Query: 29  DIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGST 88
           D+  P G+S      D        ++ + N   ++ W+VA  P K + M  F+M+M+G+T
Sbjct: 45  DVMYPIGYS------DKPVPDTSIQETDKNLVEKRCWDVALGPLKQIPMNLFIMYMSGNT 98

Query: 89  VHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLN 148
           + +F I +     W+PI AL  +   F+  ++S    L   L++   NL G AL ++K  
Sbjct: 99  ISIFPIMMVCMMAWRPIQALMSMSATFKLLENSNQQWL-QGLVYSVGNLLGSALAIYKCQ 157

Query: 149 TLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
           ++GLLPTH+SDW++ + P   +E  GGG+ L
Sbjct: 158 SMGLLPTHSSDWLAFIEPPQRMEIMGGGMVL 188

May mediate anti-apoptotic activity.

Salmo salar (taxid: 8030)

>sp|O94520|YQ13_SCHPO ER membrane protein complex subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1281.03c PE=3 SV=1

 Score = 77.0 bits (188), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 69/118 (58%), Gaps = 1/118 (0%)

Query: 46  STLSRQKKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPI 105
           S  ++++++ + +   +KAWE+A +P K + M   + +M+G+++ +FSI  T   L  P+
Sbjct: 57  SIFAKREEELQKDLLLKKAWELAYSPLKQIPMNAILAYMSGNSLQIFSIMTTLMLLVNPL 116

Query: 106 SALQGVGKVFEPYKDSKVDLLGPKL-LFIALNLGGLALGVWKLNTLGLLPTHASDWVS 162
            A+   G  F P+K +    L P +  +I   L  + +GV+KL  +GLLPT  SDW++
Sbjct: 117 KAITSTGSAFTPFKGTHPGTLWPAMGAYILFQLLLMGIGVYKLQRMGLLPTTTSDWLA 174

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P53073|EMC4_YEAST ER membrane protein complex subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMC4 PE=1 SV=1

 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 12/158 (7%)

Query: 16  VDFTDNSTTPSTRDIADPPGF---------SRASQDQDDSTLSRQKKDAEANWKSQKAWE 66
             + +     ++  +  PPGF         +R  QD    T S  +K+     + QKAW+
Sbjct: 16  TKYIEKYNIQNSNTLPSPPGFEGNSSKGNVTRKQQDATSQTTSLAQKNQITVLQVQKAWQ 75

Query: 67  VAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPY---KDSKV 123
           +A  P K++ M  FM +M+G+++ +  I      L  PI A+      F+P    K ++ 
Sbjct: 76  IALQPAKSIPMNIFMSYMSGTSLQIIPIMTALMLLSGPIKAIFSTRSAFKPVLGNKATQS 135

Query: 124 DLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWV 161
            +     ++I      + +G  KLN++GL+P    DW+
Sbjct: 136 QVQTAMFMYIVFQGVLMYIGYRKLNSMGLIPNAKGDWL 173

The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER).

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	180
225430525	179	PREDICTED: transmembrane protein 85 [Vit	0.988	0.994	0.949	9e-92
224092629	180	predicted protein [Populus trichocarpa]	0.994	0.994	0.893	9e-90
224143349	180	predicted protein [Populus trichocarpa]	1.0	1.0	0.883	2e-89
255548686	180	conserved hypothetical protein [Ricinus	1.0	1.0	0.9	3e-84
449455501	180	PREDICTED: ER membrane protein complex s	1.0	1.0	0.894	2e-83
357437087	178	Transmembrane protein [Medicago truncatu	0.983	0.994	0.850	4e-83
449515077	180	PREDICTED: ER membrane protein complex s	1.0	1.0	0.888	4e-83
356563993	178	PREDICTED: transmembrane protein 85-like	0.977	0.988	0.866	5e-83
358349297	178	Transmembrane protein [Medicago truncatu	0.983	0.994	0.845	1e-82
351721760	178	uncharacterized protein LOC100305631 [Gl	0.977	0.988	0.855	2e-82

>gi|225430525|ref|XP_002285573.1| PREDICTED: transmembrane protein 85 [Vitis vinifera] gi|147864285|emb|CAN83012.1| hypothetical protein VITISV_010104 [Vitis vinifera] gi|296082155|emb|CBI21160.3| unnamed protein product [Vitis vinifera]

 Score =  341 bits (874), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 170/179 (94%), Positives = 173/179 (96%), Gaps = 1/179 (0%)

Query: 1   MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60
           MEKGKGVMG GRRWAVD TD STTPS+RDI DPPGFSRAS DQDDSTLSRQKKDAEANWK
Sbjct: 1   MEKGKGVMG-GRRWAVDLTDYSTTPSSRDIPDPPGFSRASLDQDDSTLSRQKKDAEANWK 59

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           +QKAWEVAQAPFKNL+MMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 60  AQKAWEVAQAPFKNLLMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 119

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPA EVEYSGGGIPL
Sbjct: 120 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPAQEVEYSGGGIPL 178

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092629|ref|XP_002309687.1| predicted protein [Populus trichocarpa] gi|222855663|gb|EEE93210.1| predicted protein [Populus trichocarpa]

 Score =  334 bits (856), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 160/179 (89%), Positives = 172/179 (96%)

Query: 1   MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60
           M+KGK VMGSGRRWAVDFTDNST PS+RDI DPPGFSRASQDQ+DS +++QKKDAEANWK
Sbjct: 1   MDKGKAVMGSGRRWAVDFTDNSTLPSSRDIPDPPGFSRASQDQEDSAVTKQKKDAEANWK 60

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           +QKAWEVAQAPFKNL+MMGFMMWMAG+TVHLFSIGITFSALWQPI ALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPFKNLLMMGFMMWMAGNTVHLFSIGITFSALWQPIGALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
           SKVDLL PKL+FIALNLGGLALG+WKLNTLGLLPTHASDWVSSLPPA EVEYSGGG+PL
Sbjct: 121 SKVDLLVPKLVFIALNLGGLALGIWKLNTLGLLPTHASDWVSSLPPAKEVEYSGGGVPL 179

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143349|ref|XP_002324924.1| predicted protein [Populus trichocarpa] gi|118487965|gb|ABK95804.1| unknown [Populus trichocarpa] gi|222866358|gb|EEF03489.1| predicted protein [Populus trichocarpa]

 Score =  333 bits (854), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/180 (88%), Positives = 170/180 (94%)

Query: 1   MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60
           M+KGK VMGSGRRWAVDFTDNSTTPS+RDI DPPGF R SQ+QDDS +++QKKDAEANWK
Sbjct: 1   MDKGKAVMGSGRRWAVDFTDNSTTPSSRDIPDPPGFYRTSQEQDDSAVTKQKKDAEANWK 60

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           SQKAWEVAQAPFKNL+MMGFMMWMAG+TVHLFSIGITFSALWQPI ALQGVGKVFEPYKD
Sbjct: 61  SQKAWEVAQAPFKNLLMMGFMMWMAGNTVHLFSIGITFSALWQPIGALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPLQ 180
           SKVDLL PKL+FIALNLGGLALG+WKLNTLGLLPTH SDWVSSLPPA EVEYSGGG PL+
Sbjct: 121 SKVDLLAPKLIFIALNLGGLALGIWKLNTLGLLPTHVSDWVSSLPPAKEVEYSGGGFPLR 180

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548686|ref|XP_002515399.1| conserved hypothetical protein [Ricinus communis] gi|223545343|gb|EEF46848.1| conserved hypothetical protein [Ricinus communis]

 Score =  316 bits (809), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 162/180 (90%), Positives = 174/180 (96%)

Query: 1   MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60
           MEKGKGVMGSGRRWA+DFTDNS  PS+RD+ DPPGFSRASQDQDDST+++QKKDAEANWK
Sbjct: 1   MEKGKGVMGSGRRWAIDFTDNSNLPSSRDVPDPPGFSRASQDQDDSTVTKQKKDAEANWK 60

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           +QKAWEVAQAPFKNLMMMGFMMWMAG+TVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPFKNLMMMGFMMWMAGNTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPLQ 180
           S+VDL GPKLLFIALNLGGLALG+WKLN+LGLLPTHASDWVSSLPPA EVE+SGGGIPL 
Sbjct: 121 SRVDLNGPKLLFIALNLGGLALGIWKLNSLGLLPTHASDWVSSLPPAQEVEFSGGGIPLH 180

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455501|ref|XP_004145491.1| PREDICTED: ER membrane protein complex subunit 4-like [Cucumis sativus]

 Score =  313 bits (801), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 161/180 (89%), Positives = 170/180 (94%)

Query: 1   MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60
           MEKGKG+M   RRWAVDF+DNS++ STRDI DPPGF+RASQDQDDSTLSRQKKDAE+NWK
Sbjct: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           +QKAWEVAQAP KNL MMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPLQ 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH SDWVSSLPPA EVE+SGGGI L+
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357437087|ref|XP_003588819.1| Transmembrane protein [Medicago truncatula] gi|355477867|gb|AES59070.1| Transmembrane protein [Medicago truncatula]

 Score =  312 bits (799), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 154/181 (85%), Positives = 168/181 (92%), Gaps = 4/181 (2%)

Query: 1   MEKGKGVMGS-GRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
           M+KGKGVMGS GRRWAVDF+DNST+   RDI DPPGFSRAS DQDDSTLSRQKKDAE+NW
Sbjct: 1   MDKGKGVMGSSGRRWAVDFSDNSTS---RDIIDPPGFSRASLDQDDSTLSRQKKDAESNW 57

Query: 60  KSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
           KSQKAWEVAQAPFKNL+MMGFMMWMAG+TVHLFSIGITFSALWQPISALQ VGK+FEPYK
Sbjct: 58  KSQKAWEVAQAPFKNLLMMGFMMWMAGNTVHLFSIGITFSALWQPISALQSVGKMFEPYK 117

Query: 120 DSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
           D+KV+LLGPKL+FIALNLGG+ LGVWKLN+LGLLPTH SDWVSSL PA EVEYSGGG+  
Sbjct: 118 DAKVELLGPKLVFIALNLGGMLLGVWKLNSLGLLPTHTSDWVSSLAPAQEVEYSGGGLNF 177

Query: 180 Q 180
           +
Sbjct: 178 R 178

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515077|ref|XP_004164576.1| PREDICTED: ER membrane protein complex subunit 4-like [Cucumis sativus]

 Score =  312 bits (799), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 160/180 (88%), Positives = 170/180 (94%)

Query: 1   MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60
           MEKGKG+M   RRWAVDF+DNS++ STRDI DPPGF+RASQDQDDSTLSRQKKDAE+NWK
Sbjct: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           +QKAWEVAQAP KNL MMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPY+D
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYRD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPLQ 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH SDWVSSLPPA EVE+SGGGI L+
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563993|ref|XP_003550241.1| PREDICTED: transmembrane protein 85-like [Glycine max]

 Score =  311 bits (798), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 156/180 (86%), Positives = 166/180 (92%), Gaps = 4/180 (2%)

Query: 1   MEKGKGVMGSG-RRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
           MEKGKGVMGSG RRW VDF+DNST+   RDI DPPGFSRAS DQDDSTLSRQKKDAE+NW
Sbjct: 1   MEKGKGVMGSGGRRWGVDFSDNSTS---RDIPDPPGFSRASLDQDDSTLSRQKKDAESNW 57

Query: 60  KSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
           K+QKAWEVAQAP KNL+MMGFMMWMAGSTVHLFSIGITFSALWQPISALQ VGK+FEPYK
Sbjct: 58  KAQKAWEVAQAPMKNLLMMGFMMWMAGSTVHLFSIGITFSALWQPISALQSVGKMFEPYK 117

Query: 120 DSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
           D+KV+LLGPKLLFIALNLGGLALGVWKLN LGLLPTH SDWVSSL PA EVE+SGGG+ L
Sbjct: 118 DNKVELLGPKLLFIALNLGGLALGVWKLNALGLLPTHTSDWVSSLAPAQEVEFSGGGVNL 177

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358349297|ref|XP_003638675.1| Transmembrane protein [Medicago truncatula] gi|355504610|gb|AES85813.1| Transmembrane protein [Medicago truncatula]

 Score =  310 bits (795), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 153/181 (84%), Positives = 167/181 (92%), Gaps = 4/181 (2%)

Query: 1   MEKGKGVMGS-GRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
           M+KGKGVMGS GRRWAVDF+DNST+   RD  DPPGFSRAS DQDDSTLSRQKKDAE+NW
Sbjct: 1   MDKGKGVMGSSGRRWAVDFSDNSTS---RDFIDPPGFSRASLDQDDSTLSRQKKDAESNW 57

Query: 60  KSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
           KSQKAWEVAQAPFKNL+MMGFMMWMAG+TVHLFSIGITFSALWQPISALQ VGK+FEPYK
Sbjct: 58  KSQKAWEVAQAPFKNLLMMGFMMWMAGNTVHLFSIGITFSALWQPISALQSVGKMFEPYK 117

Query: 120 DSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
           D+KV+LLGPKL+FIALNLGG+ LGVWKLN+LGLLPTH SDWVSSL PA EVEYSGGG+  
Sbjct: 118 DAKVELLGPKLVFIALNLGGMLLGVWKLNSLGLLPTHTSDWVSSLAPAQEVEYSGGGLNF 177

Query: 180 Q 180
           +
Sbjct: 178 R 178

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721760|ref|NP_001238244.1| uncharacterized protein LOC100305631 [Glycine max] gi|255626141|gb|ACU13415.1| unknown [Glycine max]

 Score =  310 bits (793), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 154/180 (85%), Positives = 165/180 (91%), Gaps = 4/180 (2%)

Query: 1   MEKGKGVMGSG-RRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
           MEKGKGVMGSG RRW VDF+DNST+   RDI DPPGFSR S DQDDSTLSRQKKDAE+NW
Sbjct: 1   MEKGKGVMGSGGRRWGVDFSDNSTS---RDIPDPPGFSRTSLDQDDSTLSRQKKDAESNW 57

Query: 60  KSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
           K+QKAWEVAQAP KNL+MMGFMMWMAGSTVHLFSIGITFSALWQPISALQ VGK+FEPYK
Sbjct: 58  KAQKAWEVAQAPMKNLLMMGFMMWMAGSTVHLFSIGITFSALWQPISALQSVGKMFEPYK 117

Query: 120 DSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
           D+KV+LLGPKLLFIALNLGGLALG+WKLN LGLLPTH SDWVSSL PA EVE+SGGG+ L
Sbjct: 118 DNKVELLGPKLLFIALNLGGLALGIWKLNALGLLPTHTSDWVSSLAPAQEVEFSGGGVNL 177

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	180
TAIR|locus:2183745	187	AT5G10780 "AT5G10780" [Arabido	0.922	0.887	0.801	7e-70
DICTYBASE|DDB_G0295773	197	DDB_G0295773 "DUF1077 family p	0.861	0.786	0.301	2.8e-18
UNIPROTKB|E2R5T1	183	EMC4 "Uncharacterized protein"	0.977	0.961	0.303	2.8e-18
UNIPROTKB|Q6GR43	180	emc4 "ER membrane protein comp	0.922	0.922	0.333	2.8e-18
UNIPROTKB|Q6PBF7	180	emc4 "ER membrane protein comp	0.922	0.922	0.327	7.5e-18
ZFIN|ZDB-GENE-040426-1891	189	emc4 "ER membrane protein comp	0.877	0.835	0.304	7.5e-18
UNIPROTKB|Q3T0K8	183	EMC4 "ER membrane protein comp	0.65	0.639	0.355	2e-17
UNIPROTKB|Q5J8M3	183	EMC4 "ER membrane protein comp	0.65	0.639	0.355	2e-17
UNIPROTKB|F2Z5K1	183	EMC4 "Uncharacterized protein"	0.65	0.639	0.355	2e-17
UNIPROTKB|Q5RC35	183	EMC4 "ER membrane protein comp	0.65	0.639	0.355	2e-17

TAIR|locus:2183745 AT5G10780 "AT5G10780" [Arabidopsis thaliana (taxid:3702)]

 Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
 Identities = 133/166 (80%), Positives = 147/166 (88%)

Query:     1 MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60
             M+KGK VMG+GRRWAV+F+D ST PS+RDI DPPGFSRASQ+QDDS  SRQKKDAEA WK
Sbjct:     1 MDKGKAVMGTGRRWAVEFSDQSTVPSSRDILDPPGFSRASQEQDDSANSRQKKDAEATWK 60

Query:    61 SQKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
              QKAWEVAQ+PFKNL         AG+TVHLFSIGITFSALWQPISALQ VGK+FEP+KD
Sbjct:    61 LQKAWEVAQSPFKNLMMMGFMMWMAGNTVHLFSIGITFSALWQPISALQSVGKIFEPFKD 120

Query:   121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPP 166
             +KV+LL PKL+F+ALNLGGLALGVWKLNTLGLLPTHASDWVSSLPP
Sbjct:   121 NKVELLMPKLVFLALNLGGLALGVWKLNTLGLLPTHASDWVSSLPP 166

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

DICTYBASE|DDB_G0295773 DDB_G0295773 "DUF1077 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 47/156 (30%), Positives = 84/156 (53%)

Query:    20 DNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLXXXX 79
             +N   P T   ++ P  S +SQ Q  S   +     +   K++K WE+A++P KN+    
Sbjct:    40 NNLPLPLTSGGSESP-ISTSSQPQVSSQPQQLSTKQQMELKAKKGWELAKSPAKNIFMTG 98

Query:    80 XXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGG 139
                   G+ +++F++ +   A+  P+ A+     +F  + D K D++  KL F+ + L  
Sbjct:    99 FFLWMIGNGINIFTMPVIIYAVINPVKAIFQTNTMFSRFNDCKGDIIQMKLTFVVIQLAL 158

Query:   140 LALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGG 175
             L++ ++K +++GLLP   SDW+SSLP    +EYS G
Sbjct:   159 LSVTLYKCSSMGLLPITPSDWISSLPIKKAIEYSSG 194

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|E2R5T1 EMC4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 55/181 (30%), Positives = 89/181 (49%)

Query:     3 KGKGVMGSGRR--WAVDFTD-NSTTPSTRDIADPPGFSRASQDQDDSTL-SRQKKDAEAN 58
             +G  V   GRR  WA++ +     + S  D     G S       D  +     ++A+  
Sbjct:     4 QGSLVANRGRRFKWAIELSGPGGGSRSRSDRGGGQGDSLYPVGYLDKQVPDTSVQEADRI 63

Query:    59 WKSQKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPY 118
                ++ W++A  P K +         AG+T+ +F   +     W+PI AL  +   F+  
Sbjct:    64 LVEKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKML 123

Query:   119 KDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIP 178
             + S    L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +E+SGGG+ 
Sbjct:   124 ESSSQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLL 182

Query:   179 L 179
             L
Sbjct:   183 L 183

GO:0072546 "ER membrane protein complex" evidence=IEA

UNIPROTKB|Q6GR43 emc4 "ER membrane protein complex subunit 4" [Xenopus laevis (taxid:8355)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 60/180 (33%), Positives = 89/180 (49%)

Query:     7 VMGSGRR--WAVDFTDNSTTP-----STRDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
             V   GRR  WA++F    +         +D   P G+S    D+     S Q+ D     
Sbjct:     8 VTNRGRRFKWAIEFGSGGSRGRGERGGLQDSMYPVGYS----DKQVPDTSVQESDHILVE 63

Query:    60 KSQKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
             K  + W++A  P K +         AG+T+ +F I +     W+PI AL      F+  +
Sbjct:    64 K--RCWDIALGPLKQIPMNLFIMYMAGNTISIFPIMMVCMMAWRPIQALLATPATFKLLE 121

Query:   120 DSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
              S    L   L+++  NL GLALGV+K  ++GLLPTHASDW++ + P   +EY+GGG  L
Sbjct:   122 SSGQRFL-QGLVYLIGNLLGLALGVYKCQSMGLLPTHASDWLAFIEPPERMEYTGGGFLL 180

GO:0016021 "integral to membrane" evidence=ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

UNIPROTKB|Q6PBF7 emc4 "ER membrane protein complex subunit 4" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 59/180 (32%), Positives = 89/180 (49%)

Query:     7 VMGSGRR--WAVDFTDNSTTP-----STRDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
             V   GRR  WA++F    +         +D   P G+S    D+     S Q+ D     
Sbjct:     8 VANRGRRFKWAIEFGSGGSRGRGERGGLQDSMYPVGYS----DKQVPDTSVQESDHILVE 63

Query:    60 KSQKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
             K  + W++A  P K +         AG+T+ +F I +     W+PI AL      F+  +
Sbjct:    64 K--RCWDIALGPLKQIPMNLFIMYMAGNTISIFPIMMVCMMAWRPIQALLATPATFKLLE 121

Query:   120 DSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
              S    L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +EY+GGG+ L
Sbjct:   122 SSGQRFL-QGLVYLIGNLLGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEYTGGGLLL 180

GO:0016021 "integral to membrane" evidence=ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

ZFIN|ZDB-GENE-040426-1891 emc4 "ER membrane protein complex subunit 4" [Danio rerio (taxid:7955)]

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 52/171 (30%), Positives = 91/171 (53%)

Query:    13 RWAVDFT-DNSTTPSTR-----DIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWE 66
             +WAV+ +  NS + S R     D+  P G+S   +   D+++    ++A+ N   ++ W+
Sbjct:    24 KWAVELSLGNSRSRSDRQGKDGDVMYPVGYS--DKPVPDTSV----QEADRNLVEKRCWD 77

Query:    67 VAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLL 126
             VA  P K +         +G+T+ +F I +     W+PI AL  +   F+  + S    L
Sbjct:    78 VALGPLKQIPMNLFIMYMSGNTISIFPIMMVCMMAWRPIQALMSMSATFKLLESSSQQWL 137

Query:   127 GPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGI 177
                L+++  NL G AL ++K  ++GLLPTH+SDW++ + P   +E  GGG+
Sbjct:   138 -QGLVYLIGNLLGSALAIYKCQSMGLLPTHSSDWLAFIEPPQRLEIMGGGM 187

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q3T0K8 EMC4 "ER membrane protein complex subunit 4" [Bos taurus (taxid:9913)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 42/118 (35%), Positives = 67/118 (56%)

Query:    62 QKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
             ++ W++A  P K +         AG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct:    67 KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query:   122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
                 L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +E+SGGG+ L
Sbjct:   127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

GO:0072546 "ER membrane protein complex" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0006915 "apoptotic process" evidence=IEA

UNIPROTKB|Q5J8M3 EMC4 "ER membrane protein complex subunit 4" [Homo sapiens (taxid:9606)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 42/118 (35%), Positives = 67/118 (56%)

Query:    62 QKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
             ++ W++A  P K +         AG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct:    67 KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query:   122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
                 L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +E+SGGG+ L
Sbjct:   127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

GO:0006915 "apoptotic process" evidence=IEA

GO:0072546 "ER membrane protein complex" evidence=IDA

GO:0016021 "integral to membrane" evidence=IDA

UNIPROTKB|F2Z5K1 EMC4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 42/118 (35%), Positives = 67/118 (56%)

Query:    62 QKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
             ++ W++A  P K +         AG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct:    67 KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query:   122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
                 L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +E+SGGG+ L
Sbjct:   127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

GO:0072546 "ER membrane protein complex" evidence=IEA

UNIPROTKB|Q5RC35 EMC4 "ER membrane protein complex subunit 4" [Pongo abelii (taxid:9601)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 42/118 (35%), Positives = 67/118 (56%)

Query:    62 QKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
             ++ W++A  P K +         AG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct:    67 KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query:   122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 179
                 L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +E+SGGG+ L
Sbjct:   127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

GO:0016021 "integral to membrane" evidence=ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6PBF7	EMC4_XENTR	No assigned EC number	0.35	0.9222	0.9222	yes	no
Q6P011	EMC4_DANRE	No assigned EC number	0.3274	0.8777	0.8359	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00032801001	SubName- Full=Putative uncharacterized protein (Chromosome chr4 scaffold_6, whole genome shotgun sequence); (179 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00010881001	SubName- Full=Putative uncharacterized protein (Chromosome undetermined scaffold_292, whole gen [...] (246 aa)				•	•				0.603
	GSVIVG00015676001	SubName- Full=Chromosome chr2 scaffold_11, whole genome shotgun sequence; (115 aa)				•			•		0.460

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	180
pfam06417	124	pfam06417, DUF1077, Protein of unknown function (D	3e-47

>gnl|CDD|219016 pfam06417, DUF1077, Protein of unknown function (DUF1077)

 Score =  150 bits (380), Expect = 3e-47
 Identities = 46/120 (38%), Positives = 75/120 (62%), Gaps = 2/120 (1%)

Query: 49  SRQKKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISAL 108
            +  K+   + K +KAW++A  P K+L M  FMM+M+G+++ +F I +    LW PI A+
Sbjct: 2   KQASKEESRHLKLKKAWDIALGPAKSLPMNLFMMYMSGNSLQIFPIMMVGMLLWNPIKAI 61

Query: 109 QGVGKVFEPYKDSKV--DLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPP 166
                 F+P +++     LL  KL+++   L  LALG++KLN++GLLPT +SDW++  PP
Sbjct: 62  LSTNSAFKPLENNSNRSQLLLQKLVYVLGQLLALALGLYKLNSMGLLPTTSSDWLAWEPP 121

This family consists of several hypothetical eukaryotic proteins of unknown function. Length = 124

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	180
KOG3318	178	consensus Predicted membrane protein [Function unk	100.0
PF06417	124	DUF1077: Protein of unknown function (DUF1077); In	100.0

>KOG3318 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=2.2e-68  Score=434.87  Aligned_cols=171  Identities=48%  Similarity=0.865  Sum_probs=155.5

Q ss_pred             CCCCCceecccCCCCCCCCCCCCCCCCCCCCCCCCcchhhhhhhhhHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhCCc
Q 030270            9 GSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGST   88 (180)
Q Consensus         9 ~~~~kW~~dl~~~~~~~~~~~lp~PpGy~~~~~~~~~~~~~~~~~~~~~~L~~kkaWeiA~~P~K~ipMn~FMmyMsGns   88 (180)
                      +...+|++++.++....++.++|+||||.+++...++++.+.+++++++.|+.|||||+|++|+||||||+|||||+|||
T Consensus         5 ~~~~~Wa~~~~~~~~~~nsd~~~~PpGf~~~s~~~~~s~~a~r~~d~~~~L~~kkaWdiAl~P~K~iPMN~FmmYMaGns   84 (178)
T KOG3318|consen    5 GEKLDWAVEFSDQSTVPNSDSIPSPPGFSRKSLVQQTSAEADRKKDQEATLVLKKAWDIALGPLKNIPMNLFMMYMAGNS   84 (178)
T ss_pred             ccccchHHHhCCcccCCcccCCCCCCCccccccccchHHHHhhhhhHHHHHHHHHHHHHhhChHhhccHHHHHHHHcCCc
Confidence            46789999999977655667889999999886555444444555667789999999999999999999999999999999


Q ss_pred             cchhHHHHHHHHHHHHHHHhhhcccccccccccc-ccchhhHHHHHHHHHHHHHHHHHHhhcCCCcCCCCCCcccCCCCc
Q 030270           89 VHLFSIGITFSALWQPISALQGVGKVFEPYKDSK-VDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPA  167 (180)
Q Consensus        89 i~IFsImmv~m~~~~Pikai~~~~~~F~~~e~~~-~~~~~~kl~yv~~ql~~l~lglyK~~~MGLLPt~~sDWla~~~p~  167 (180)
                      |||||||||+|+++||||||++++++|++||+++ .+++.+|++|+++|++++++|+|||++|||||||+||||+|++|+
T Consensus        85 vsIFpIMm~~Mml~~PikAl~st~stFkp~eg~~~~q~~~~~lvy~l~nL~~~~lgvyKlqsMGLLPt~aSDWLa~~~pp  164 (178)
T KOG3318|consen   85 VSIFPIMMVLMMLWRPIKALFSTGSTFKPFEGNKASQLFMAKLVYLLGNLGGLALGVYKLQSMGLLPTHASDWLAFEPPP  164 (178)
T ss_pred             eEEeHHHHHHHHHHHHHHHHHhhhhhcccccCCchhhhHHHHHHHHHHhhhHHHHHHHhhhhcCCCCCCcccchhccCCc
Confidence            9999999999999999999999999999999976 689999999999999999999999999999999999999999999


Q ss_pred             cceeecccCccC
Q 030270          168 LEVEYSGGGIPL  179 (180)
Q Consensus       168 ~~~E~s~Gg~~l  179 (180)
                      .++||++|+..+
T Consensus       165 ~~~~ys~g~~~f  176 (178)
T KOG3318|consen  165 FRLEYSGGPMCF  176 (178)
T ss_pred             ceeeecCCceee
Confidence            999999998754

>PF06417 DUF1077: Protein of unknown function (DUF1077); InterPro: IPR009445 This family consists of several hypothetical eukaryotic proteins of unknown function

Probab=100.00  E-value=5e-60  Score=370.91  Aligned_cols=117  Identities=41%  Similarity=0.761  Sum_probs=112.0

Q ss_pred             hhhHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHhhhcccccccccccc----ccchh
Q 030270           52 KKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSK----VDLLG  127 (180)
Q Consensus        52 ~~~~~~~L~~kkaWeiA~~P~K~ipMn~FMmyMsGnsi~IFsImmv~m~~~~Pikai~~~~~~F~~~e~~~----~~~~~  127 (180)
                      +++++++|++|||||+|++|+||||||+|||||||||+||||||||+|+++||||||+++|++|++||++.    .++++
T Consensus         4 ~~~~~~~L~~KkAWeiA~~P~K~ipMn~FMmyMsGnsi~IFsIm~v~m~~~~Pikai~~~~~~F~~~~~~~~~~~~~~~~   83 (124)
T PF06417_consen    4 SKEQQDALKVKKAWEIALGPAKSIPMNLFMMYMSGNSIQIFSIMMVGMLLWNPIKAIFSVNQAFKPFEGDSNDNRSQLLL   83 (124)
T ss_pred             cHHHHHHHHHHHHHHHHhhHHHhhhHHHHHHHHhCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHH
Confidence            45678899999999999999999999999999999999999999999999999999999999999998863    48999


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCcCCCCCCcccCCCCcc
Q 030270          128 PKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPAL  168 (180)
Q Consensus       128 ~kl~yv~~ql~~l~lglyK~~~MGLLPt~~sDWla~~~p~~  168 (180)
                      +|++||+||++++++|+||||+|||||||+||||+|++|++
T Consensus        84 ~kl~yvl~ql~~l~~gl~K~~~MGLLPt~~sDWla~~~p~~  124 (124)
T PF06417_consen   84 QKLVYVLCQLLGLALGLYKCNSMGLLPTTSSDWLAFEPPQQ  124 (124)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHccCCCCCcccccccCCCCC
Confidence            99999999999999999999999999999999999999874

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00