Citrus Sinensis ID: 030307

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18

MASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSYLRIKVVNLGSSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTNLKDENSFMEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVSMKMEGTDSFSRSSI

ccccccccEEcccccccccEEEEccccEEcccHHHHHHHHHcccccEEEEEEEEccccccEEEEEEEEEEccccccEEEEEEEEcccccEEEEEEEcccccccEEEcccEEEEEcccccccccccccccccccEEEEEEEcccEEEEEEcccEEEEEEEEccccccccccccccccccc

ccccccEEEEcccccccccEEEEccccccccccHHHHHHHccccccEEEEEEEccccccccEEcEEEEEEEcccccEEEEEEEEcccccEEEEEEEccccccccEccccEEEEEEcccccccccccccccEEEEEEEEEccccEEEEEEcccEEEEEEEEEcccccccccccccccccc

masyaplfvnandrrwkpdaivfnsaqlygtpsywvqqffressgatlLNATLLTNSSSSIVASAIswedsenaKSYLRIKVVNLGSSSVNLKVsvdglgpnsiklsgstktqltstnlkdensfmepnkvvpsltLLENAAKDmdvvispysftsFDLLRESVsmkmegtdsfsrssi

masyaplfvnandrrwkpDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSYLRIKVVNLGSSSVNLKVSVDGlgpnsiklsgstktqltstnlkdensfmepnKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVsmkmegtdsfsrssi

MASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFREssgatllnatlltnssssivasaisWEDSENAKSYLRIKVVNLGSSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTNLKDENSFMEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVSMKMEGTDSFSRSSI

*****PLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLN*************************SYLRIKVVNLGSSSVNLKVS*************************************PSLTLLENAAKDMDVVISPYSFTSFDLL*******************

MASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSYLRIKVVNLGSSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTNLKDENSFMEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLR******************

MASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSYLRIKVVNLGSSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTNLKDENSFMEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVSMK************

*ASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSYLRIKVVNLGSSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTNLKDENSFMEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVS**************

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MASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSYLRIKVVNLGSSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTNLKDENSFMEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVSMKMEGTDSFSRSSI

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		179	2.2.26 [Sep-21-2011]
Q9SG80		678	Alpha-L-arabinofuranosida	yes	no	0.966	0.255	0.647	2e-58
Q8VZR2		674	Alpha-L-arabinofuranosida	no	no	0.960	0.255	0.583	2e-47
Q2U790		629	Probable alpha-N-arabinof	yes	no	0.743	0.211	0.280	2e-05
Q0CTV2		628	Probable alpha-N-arabinof	N/A	no	0.513	0.146	0.326	2e-05
B8NKA3		629	Probable alpha-N-arabinof	N/A	no	0.508	0.144	0.32	6e-05
Q8NK90		628	Alpha-N-arabinofuranosida	N/A	no	0.508	0.144	0.33	8e-05
P42254		628	Alpha-N-arabinofuranosida	yes	no	0.508	0.144	0.33	9e-05
Q96X54		628	Probable alpha-N-arabinof	N/A	no	0.508	0.144	0.33	9e-05
A2Q7E0		628	Probable alpha-N-arabinof	yes	no	0.508	0.144	0.33	0.0001

>sp\|Q9SG80\|ASD1_ARATH Alpha-L-arabinofuranosidase 1 OS=Arabidopsis thaliana GN=ASD1 PE=1 SV=1	Back alignment and function desciption

 Score =  224 bits (572), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 114/176 (64%), Positives = 140/176 (79%), Gaps = 3/176 (1%)

Query: 1   MASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           MASYAPLFVN NDRRW PDAIVFNS+ LYGTPSYWVQ+FF ESSGATLL +TL  NS+S 
Sbjct: 500 MASYAPLFVNTNDRRWNPDAIVFNSSHLYGTPSYWVQRFFAESSGATLLTSTLKGNSTS- 558

Query: 61  IVASAISWEDSENAKSYLRIKVVNLGSSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTNLK 120
           +VASAISW++  N K Y+RIK VN G++S N++V V GL PN +++SGS KT LTSTN+ 
Sbjct: 559 LVASAISWKN--NGKDYIRIKAVNFGANSENMQVLVTGLDPNVMRVSGSKKTVLTSTNVM 616

Query: 121 DENSFMEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVSMKMEGTDSFSR 176
           DENSF +P KVVP  +LLE A +DM VV+ P+SF+SFDLL+ES  ++M  +DS S 
Sbjct: 617 DENSFSQPEKVVPHESLLELAEEDMTVVLPPHSFSSFDLLKESAKIRMPISDSSSH 672

May be involved in the coordinated dissolution of the cell wall matrix during abscission and in the secondary cell wall formation in xylem vessels. Prefers arabinoxylan, but may also use pectic arabinans as substrates.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: -

>sp\|Q8VZR2\|ASD2_ARATH Alpha-L-arabinofuranosidase 2 OS=Arabidopsis thaliana GN=ASD2 PE=2 SV=1	Back alignment and function description

>sp\|Q2U790\|ABFA_ASPOR Probable alpha-N-arabinofuranosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=abfA PE=3 SV=2	Back alignment and function description

>sp\|Q0CTV2\|ABFA_ASPTN Probable alpha-N-arabinofuranosidase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=abfA PE=3 SV=1	Back alignment and function description

>sp\|B8NKA3\|ABFA_ASPFN Probable alpha-N-arabinofuranosidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=abfA PE=3 SV=2	Back alignment and function description

>sp\|Q8NK90\|ABFA_ASPKW Alpha-N-arabinofuranosidase A OS=Aspergillus kawachii (strain NBRC 4308) GN=abfA PE=1 SV=2	Back alignment and function description

>sp\|P42254\|ABFA_ASPNG Alpha-N-arabinofuranosidase A OS=Aspergillus niger GN=abfA PE=1 SV=1	Back alignment and function description

>sp\|Q96X54\|ABFA_ASPAW Probable alpha-N-arabinofuranosidase A OS=Aspergillus awamori GN=abfA PE=1 SV=1	Back alignment and function description

>sp\|A2Q7E0\|ABFA_ASPNC Probable alpha-N-arabinofuranosidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=abfA PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		179
255565362		678	Alpha-N-arabinofuranosidase 1 precursor,	1.0	0.264	0.698	1e-67
356504623		676	PREDICTED: alpha-L-arabinofuranosidase 1	1.0	0.264	0.675	1e-63
224086707		670	predicted protein [Populus trichocarpa]	0.988	0.264	0.698	1e-62
356571858		676	PREDICTED: alpha-L-arabinofuranosidase 1	1.0	0.264	0.675	2e-62
157313302		677	alpha-L-arabinofuranosidase protein [Pru	1.0	0.264	0.686	3e-62
33151175		675	alpha-L-arabinofuranosidase [Malus x dom	1.0	0.265	0.694	3e-62
217070858		179	unknown [Medicago truncatula]	0.938	0.938	0.678	5e-62
119507455		675	alpha-Arabinosidase1 [Pyrus communis]	1.0	0.265	0.688	8e-62
116739148		677	alpha-L-arabinofuranosidase [Prunus pers	1.0	0.264	0.675	8e-62
357509145		672	Alpha-L-arabinofuranosidase [Medicago tr	0.938	0.25	0.678	2e-61

>gi\|255565362\|ref\|XP_002523672.1\| Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] gi\|223537072\|gb\|EEF38707.1\| Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  261 bits (666), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 125/179 (69%), Positives = 158/179 (88%)

Query: 1   MASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           MASYAPLFV++N+RRW PDAIVFNS+QLYGTPSYWVQ+FF +SSGATL+N TL TNSS+S
Sbjct: 500 MASYAPLFVHSNNRRWNPDAIVFNSSQLYGTPSYWVQRFFMDSSGATLINTTLQTNSSTS 559

Query: 61  IVASAISWEDSENAKSYLRIKVVNLGSSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTNLK 120
           ++ASAI W++S ++K+YL+IKVVN GSS+VNLK+S+DGLG NSI+LSGSTK  LTS N+ 
Sbjct: 560 LIASAIIWQNSVDSKNYLKIKVVNFGSSTVNLKISIDGLGLNSIQLSGSTKMLLTSANVM 619

Query: 121 DENSFMEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVSMKMEGTDSFSRSSI 179
           DENSF +P KV+P+L++L++A KDMDVV+ PYS TS+DLL ES ++K+ GTDS SRSSI
Sbjct: 620 DENSFNDPKKVLPTLSMLDHAGKDMDVVLPPYSLTSYDLLTESSNIKITGTDSLSRSSI 678

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|356504623\|ref\|XP_003521095.1\| PREDICTED: alpha-L-arabinofuranosidase 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|224086707\|ref\|XP_002307940.1\| predicted protein [Populus trichocarpa] gi\|222853916\|gb\|EEE91463.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356571858\|ref\|XP_003554088.1\| PREDICTED: alpha-L-arabinofuranosidase 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|157313302\|gb\|ABV32544.1\| alpha-L-arabinofuranosidase protein [Prunus persica]	Back alignment and taxonomy information

>gi\|33151175\|gb\|AAP97437.1\| alpha-L-arabinofuranosidase [Malus x domestica]	Back alignment and taxonomy information

>gi\|217070858\|gb\|ACJ83789.1\| unknown [Medicago truncatula]	Back alignment and taxonomy information

>gi\|119507455\|dbj\|BAF42035.1\| alpha-Arabinosidase1 [Pyrus communis]	Back alignment and taxonomy information

>gi\|116739148\|gb\|ABF22680.3\| alpha-L-arabinofuranosidase [Prunus persica]	Back alignment and taxonomy information

>gi\|357509145\|ref\|XP_003624861.1\| Alpha-L-arabinofuranosidase [Medicago truncatula] gi\|296882314\|gb\|ADH83380.1\| alpha-L-arabinofuranosidase [Medicago truncatula] gi\|355499876\|gb\|AES81079.1\| Alpha-L-arabinofuranosidase [Medicago truncatula]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		179
TAIR\|locus:2103172		678	ASD1 "alpha-L-arabinofuranosid	0.960	0.253	0.548	1.3e-45
TAIR\|locus:2180652		674	ASD2 "alpha-L-arabinofuranosid	0.960	0.255	0.488	1.2e-36
UNIPROTKB\|Q0CTV2		628	abfA "Probable alpha-N-arabino	0.670	0.191	0.265	0.00063

TAIR\|locus:2103172 ASD1 "alpha-L-arabinofuranosidase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 96/175 (54%), Positives = 119/175 (68%)

Query:     1 MASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFREXXXXXXXXXXXXXXXXXX 60
             MASYAPLFVN NDRRW PDAIVFNS+ LYGTPSYWVQ+FF E                  
Sbjct:   500 MASYAPLFVNTNDRRWNPDAIVFNSSHLYGTPSYWVQRFFAESSGATLLTSTLKGNSTSL 559

Query:    61 XXXXXXXWEDSENAKSYLRIKVVNLGSSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTNLK 120
                    W++  N K Y+RIK VN G++S N++V V GL PN +++SGS KT LTSTN+ 
Sbjct:   560 VASAIS-WKN--NGKDYIRIKAVNFGANSENMQVLVTGLDPNVMRVSGSKKTVLTSTNVM 616

Query:   121 DENSFMEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVSMKMEGTDSFS 175
             DENSF +P KVVP  +LLE A +DM VV+ P+SF+SFDLL+ES  ++M  +DS S
Sbjct:   617 DENSFSQPEKVVPHESLLELAEEDMTVVLPPHSFSSFDLLKESAKIRMPISDSSS 671

GO:0005576 "extracellular region" evidence=ISM

GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS

GO:0046373 "L-arabinose metabolic process" evidence=IEA

GO:0046556 "alpha-N-arabinofuranosidase activity" evidence=IEA;IDA

GO:0009044 "xylan 1,4-beta-xylosidase activity" evidence=IDA

GO:0045493 "xylan catabolic process" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR\|locus:2180652 ASD2 "alpha-L-arabinofuranosidase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q0CTV2 abfA "Probable alpha-N-arabinofuranosidase A" [Aspergillus terreus NIH2624 (taxid:341663)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.2.1.55	LOW CONFIDENCE prediction!
3rd Layer	3.2.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		179
smart00813		189	smart00813, Alpha-L-AF_C, Alpha-L-arabinofuranosid	3e-38
pfam06964		192	pfam06964, Alpha-L-AF_C, Alpha-L-arabinofuranosida	5e-32
COG3534		501	COG3534, AbfA, Alpha-L-arabinofuranosidase [Carboh	5e-05

>gnl\|CDD\|214830 smart00813, Alpha-L-AF_C, Alpha-L-arabinofuranosidase C-terminus	Back alignment and domain information

 Score =  129 bits (326), Expect = 3e-38
 Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 15/158 (9%)

Query: 1   MASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTN--SS 58
           MASYA L    N     PD + FN  Q + T +Y+V Q F +  G T+L  T+ +     
Sbjct: 42  MASYAQLVNVIN-----PDMLTFNGGQAWRTTTYYVFQLFSKHQGGTVLPVTISSPTYDG 96

Query: 59  SSIVASAISWEDSENA-KSYLRIKVVNLGSS-SVNLKVSVDGLGPNSIKLSGSTKTQLTS 116
                 A+    S++     L +KVVN     +V + +S+ GL     K   +  T LTS
Sbjct: 97  EDSDVPALDASASKDEDGGSLTVKVVNRSPEEAVTVTISLRGL-----KAKSAEGTVLTS 151

Query: 117 TNLKDENSFMEPNKVVPSLTLLENAAKD-MDVVISPYS 153
            +L   N+F +PNKVVP  + L       + V + P+S
Sbjct: 152 PDLNAANTFEDPNKVVPVTSTLAAVEGGTLTVTLPPHS 189

This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. Length = 189

>gnl\|CDD\|219243 pfam06964, Alpha-L-AF_C, Alpha-L-arabinofuranosidase C-terminus	Back alignment and domain information

>gnl\|CDD\|226064 COG3534, AbfA, Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		179
PF06964		177	Alpha-L-AF_C: Alpha-L-arabinofuranosidase C-termin	100.0
smart00813		189	Alpha-L-AF_C Alpha-L-arabinofuranosidase C-terminu	100.0
COG3534		501	AbfA Alpha-L-arabinofuranosidase [Carbohydrate tra	99.94
PF02055		496	Glyco_hydro_30: O-Glycosyl hydrolase family 30; In	96.65
PF02806		95	Alpha-amylase_C: Alpha amylase, C-terminal all-bet	93.96
KOG2566		518	consensus Beta-glucocerebrosidase [Carbohydrate tr	84.79

>PF06964 Alpha-L-AF_C: Alpha-L-arabinofuranosidase C-terminus; InterPro: IPR010720 This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (3	Back alignment and domain information

Probab=100.00  E-value=1.9e-38  Score=249.17  Aligned_cols=136  Identities=38%  Similarity=0.653  Sum_probs=116.7

Q ss_pred             CceecceeecCCCCCCCccEEEecCCceecCCchhhHHHhhccCCCeEEEEEEeecCCCceEEEEEEeccCCCCeeeEEE
Q 030307            1 MASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSYLRI   80 (179)
Q Consensus         1 masyAPl~~~~~~~qW~p~lI~~d~~~~~~tpsYyvf~lfs~~~g~~~l~~~v~~~~~~~l~~sa~~~~~s~~~~~~l~v   80 (179)
                      ||||||||++.+++||+|+||+||++++|+||+||||+||++|.|+++|         ++|+++|++|+++++    ++|
T Consensus        42 ma~~A~l~~~~~~~~w~~~li~~~~~~~~~tpsY~v~~lf~~~~g~~~l---------~~l~~~As~d~~~~~----l~v  108 (177)
T PF06964_consen   42 MACYAPLVNNIGDTQWTPDLITFDGDQVFGTPSYYVQKLFSNHRGDTVL---------PPLDVSASRDEDGGE----LYV  108 (177)
T ss_dssp             EEEEE-SBSTTS------SEEEETTSEEEESHHHHHHHHHHHCTTSEEE---------ESEEEEEEEETTTTE----EEE
T ss_pred             EEccchhhccccccccccceEEcCCCCEEECchHHHHHHHHhcCCCeEe---------ccEEEEEEEECCCCE----EEE
Confidence            8999999999999999999999999999999999999999999999999         379999999887654    999


Q ss_pred             EEEeCCCCcEEEEEEEccCCCCcccccceEEEEEecCCCCCCCCCCCCCeEeeEeeEEEecCCeEEEEEcCce
Q 030307           81 KVVNLGSSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTNLKDENSFMEPNKVVPSLTLLENAAKDMDVVISPYS  153 (179)
Q Consensus        81 kvVN~~~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~p~~~~~~~~~~~~~~~lPa~S  153 (179)
                      ||||++.++++++|+|+|+...    ..+++++|+|+++.+.|++++|++|+|++..+...++.++++|||+|
T Consensus       109 ~vVN~~~~~~~v~l~l~g~~~~----~~a~~~~Ltg~~~~a~Nt~~~p~~V~p~~~~~~~~~~~~~~~lp~~S  177 (177)
T PF06964_consen  109 KVVNRSSEPQTVTLNLQGFSPA----ATATVTTLTGDDPDAENTFENPENVVPVTSTVSAEGGTFTYTLPPYS  177 (177)
T ss_dssp             EEEE-SSSBEEEEEEETTSTS-----EEEEEEEEETSSTT-B-CSSSTTSSEEEEEEEEEETTEEEEEE-SSE
T ss_pred             EEEECCCCCEEEEEEEcCCCCC----ceEEEEEEECCCcccccCCCCCCEEEEEEeeEEecCCEEEEEeCCCC
Confidence            9999998899999999998763    68999999999999999999999999998888888999999999998

2.1.55 from EC). This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides [].; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process; PDB: 3FW6_A 3II1_A 3S2C_K 1QW9_A 1PZ3_B 1PZ2_B 1QW8_A 3UG4_A 3UG3_A 4ATW_B ....

>smart00813 Alpha-L-AF_C Alpha-L-arabinofuranosidase C-terminus	Back alignment and domain information

>COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3	Back alignment and domain information

>PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3	Back alignment and domain information

>KOG2566 consensus Beta-glucocerebrosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		179
2vrq_A		496	Alpha-L-arabinofuranosidase; hydrolase, glycosidas	5e-26
3ug3_A		504	Alpha-L-arabinofuranosidase; TIM barrel, hydrolase	1e-24
2y2w_A		574	Arabinofuranosidase; hydrolase, arabinoxylan, glyc	1e-22
1qw9_A		502	Arabinosidase, alpha-L-arabinofuranosidase; hydrol	1e-20
2c7f_A		513	Alpha-L-arabinofuranosidase; glycosidase, xylan, a	3e-20

>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A Length = 496	Back alignment and structure

 Score =  102 bits (254), Expect = 5e-26
 Identities = 36/162 (22%), Positives = 61/162 (37%), Gaps = 13/162 (8%)

Query: 1   MASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           MA+ A L             I+    ++  TP+Y V   F+    A LL+       +  
Sbjct: 342 MANIAQLV------NVLQSVILTEGERMLLTPTYHVFNMFKVHQDAELLDTWESVERTGP 395

Query: 61  I-VASAISWEDSENAKSYLRIKVVNLG-SSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTN 118
                 +S   S  A   + I + NL   +  ++ + + GL         +T T LTS  
Sbjct: 396 EGELPKVSVSASRAADGKIHISLCNLDFETGASVDIELRGLNGGVS----ATGTTLTSGR 451

Query: 119 LKDENSFMEPNKVVP-SLTLLENAAKDMDVVISPYSFTSFDL 159
           +   N+F EP +V P      +     ++  + P S T  +L
Sbjct: 452 IDGHNTFDEPERVKPAPFRDFKLEGGHLNASLPPMSVTVLEL 493

PyMOL of 2vrq

>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A Length = 504	Back alignment and structure

>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} Length = 574	Back alignment and structure

>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Length = 502	Back alignment and structure

>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Length = 513	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		179
3ug3_A		504	Alpha-L-arabinofuranosidase; TIM barrel, hydrolase	99.97
2vrq_A		496	Alpha-L-arabinofuranosidase; hydrolase, glycosidas	99.96
2y2w_A		574	Arabinofuranosidase; hydrolase, arabinoxylan, glyc	99.93
2c7f_A		513	Alpha-L-arabinofuranosidase; glycosidase, xylan, a	99.91
1qw9_A		502	Arabinosidase, alpha-L-arabinofuranosidase; hydrol	99.91
3ii1_A		535	Cellulase; CELM2, glucanase-xyanase, glucanase, xy	99.82
2e4t_A		519	Endoglucanase, xyloglucanase; TIM barrel, TIM-like	99.67
2yih_A		524	CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca	99.67
3vny_A		488	Beta-glucuronidase; TIM barrel, greek-KEY, glycosi	99.43
3ik2_A		517	Endoglucanase A; TIM-like barrel, hydrolase; 2.20A	99.29
1w91_A		503	Beta-xylosidase; MAD, seMet, tetramer, hydrolase;	98.46
2y24_A		383	Xylanase; hydrolase, GH5 family, aldotetraouronic	97.91
3kl0_A		401	Glucuronoxylanase XYNC; alpha beta barrel, (beta/a	97.81
2nt0_A		497	Glucosylceramidase; cerezyme, glucocerebrosidase,	97.78
2wnw_A		447	Activated by transcription factor SSRB; hydrolase,	97.66
3clw_A		507	Conserved exported protein; structural genomics, u	97.57
1uhv_A		500	Beta-xylosidase; family 39 glycoside hydrolase, xy	97.51
3zr5_A		656	Galactocerebrosidase; hydrolase, GALC, glycosyl hy	97.06
4ekj_A		500	Beta-xylosidase; TIM-barrel fold, hemicellulase, h	96.58
3hg3_A		404	Alpha-galactosidase A; glycoprotein, carbohydrate-	88.6
4do4_A		400	Alpha-N-acetylgalactosaminidase; pharmacological c	84.34
3cc1_A		433	BH1870 protein, putative alpha-N-acetylgalactosami	82.03
3a5v_A		397	Alpha-galactosidase; beta/alpha barrel, N-glycosyl	80.59

>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A	Back alignment and structure

Probab=99.97  E-value=1.1e-29  Score=226.22  Aligned_cols=145  Identities=23%  Similarity=0.288  Sum_probs=123.8

Q ss_pred             CceecceeecCCCCCCCccEEEecCCceecCCchhhHHHhhccCCCeEEEEEEeecCCC------------------ceE
Q 030307            1 MASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSS------------------SIV   62 (179)
Q Consensus         1 masyAPl~~~~~~~qW~p~lI~~d~~~~~~tpsYyvf~lfs~~~g~~~l~~~v~~~~~~------------------~l~   62 (179)
                      |||||||++..   |   .++.++++ +|+||+||||+||+.|+|+++|++.++++++.                  .|+
T Consensus       341 mA~~A~lvNv~---~---~i~~~~~~-~~~tpty~v~~l~~~~~g~~~l~~~v~~~~~~~~~~~~~~~~~~~~~~~p~l~  413 (504)
T 3ug3_A          341 LANLAQLVNAL---G---AIHTEKDG-LILTPVYKAFELIVNHSGEKLVKTHVESETYNIEGVMFINKMPFSVENAPFLD  413 (504)
T ss_dssp             EEEESCSBSTT---C---SEEEETTE-EEECHHHHHHHHHHHSCCSEEEEEEEECCEEEEEEEETTTTEEEEEEEEESEE
T ss_pred             EEehhhhhccc---c---eEEecCCC-cEeccccHHHHHHHhhCCCeEEeEEEecCccccccccccccccccCCCCceEE
Confidence            89999996532   2   35555555 99999999999999999999999999876432                  378


Q ss_pred             EEEEEeccCCCCeeeEEEEEEeCCCC-cEEEEEEEccCCCCcccccceEEEEEecCCCCCCCCCCCCCeEeeEeeEEEec
Q 030307           63 ASAISWEDSENAKSYLRIKVVNLGSS-SVNLKVSVDGLGPNSIKLSGSTKTQLTSTNLKDENSFMEPNKVVPSLTLLENA  141 (179)
Q Consensus        63 ~sa~~~~~s~~~~~~l~vkvVN~~~~-~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~p~~~~~~~~  141 (179)
                      ++|++|++++    .++||+||++.+ +++++|+|+|++.     ..+++++|+++++.++|||++|++|+|++ .+...
T Consensus       414 ~sA~~~~~~g----~l~v~~vN~~~~~~~~v~i~l~g~~~-----~~~~~~~Lt~~~~~a~Nt~~~P~~V~p~~-~~~~~  483 (504)
T 3ug3_A          414 AAASISEDGK----KLFIAVVNYRKEDALKVPIRVEGLGQ-----KKATVYTLTGPDVNARNTMENPNVVDITS-ETITV  483 (504)
T ss_dssp             EEEEECTTSC----EEEEEEEECCSSCCEEEEEEETTCCS-----EEEEEEEEECSSTTCCCCSSCTTSSEEEE-EEEEE
T ss_pred             EEEEEeCCCC----EEEEEEEECCCCCCEEEEEEecCCcc-----ceEEEEEEECCCcccccCCCCCCEEEeee-eeEec
Confidence            9999876544    499999999976 5999999999873     57889999999999999999999999999 77778


Q ss_pred             CCeEEEEEcCceEEEEEEecc
Q 030307          142 AKDMDVVISPYSFTSFDLLRE  162 (179)
Q Consensus       142 ~~~~~~~lPa~Sv~vl~l~~~  162 (179)
                      ++.++++|||+||+||+|+++
T Consensus       484 ~~~~~~~lp~~S~~vl~l~~~  504 (504)
T 3ug3_A          484 DTEFEHTFKPFSCSVIEVELE  504 (504)
T ss_dssp             CSEEEEEECTTEEEEEEEEC-
T ss_pred             CCEEEEEECCCEEEEEEEEeC
Confidence            999999999999999999863

PyMOL of 3ug3

>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A	Back alignment and structure

>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum}	Back alignment and structure

>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A	Back alignment and structure

>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A	Back alignment and structure

>3ii1_A Cellulase; CELM2, glucanase-xyanase, glucanase, xylanase, bifunctional enzyme, hydrolase; HET: BGC; 2.25A {Uncultured bacterium} PDB: 3fw6_A	Back alignment and structure

>2e4t_A Endoglucanase, xyloglucanase; TIM barrel, TIM-like barrel, composite domain of glycosyl HY families 5, 30, 39 and 51, hydrolase; 0.96A {Clostridium thermocellum} PDB: 2e0p_A 2eo7_A* 2ej1_A* 2eex_A* 2eqd_A*	Back alignment and structure

>2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A*	Back alignment and structure

>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A*	Back alignment and structure

>3ik2_A Endoglucanase A; TIM-like barrel, hydrolase; 2.20A {Clostridium acetobutylicum}	Back alignment and structure

>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A*	Back alignment and structure

>2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A*	Back alignment and structure

>3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A*	Back alignment and structure

>2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ...	Back alignment and structure

>2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp}	Back alignment and structure

>3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis}	Back alignment and structure

>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A	Back alignment and structure

>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A*	Back alignment and structure

>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides}	Back alignment and structure

>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*	Back alignment and structure

>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*	Back alignment and structure

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}	Back alignment and structure

>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		179
d2c7fa1		131	b.71.1.2 (A:2-16,A:387-502) Alpha-l-arabinofuranos	1e-09
d1qw9a1		130	b.71.1.2 (A:5-17,A:385-501) Alpha-l-arabinofuranos	3e-04

>d2c7fa1 b.71.1.2 (A:2-16,A:387-502) Alpha-l-arabinofuranosidase {Clostridium thermocellum [TaxId: 1515]} Length = 131	Back information, alignment and structure


class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51
domain: Alpha-l-arabinofuranosidase
species: Clostridium thermocellum [TaxId: 1515]

 Score = 51.4 bits (123), Expect = 1e-09
 Identities = 22/135 (16%), Positives = 40/135 (29%), Gaps = 22/135 (16%)

Query: 36  VQQFFRESSGATLLNATLLTNSS----------SSIVASAISWEDSENAKSYLRIKVVNL 85
           V + ++ + G  L     + NS           + I + AI  E+ E       I  VN 
Sbjct: 7   VDKDYKIAEGIVL---QPVINSPLHDTSKHEDVTDIESVAIYNEEKEEV----TIFAVNR 59

Query: 86  G-SSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTNLKDENSFMEPNKVVPSLTLLENAAKD 144
                + L   V G+    +         L   +LK  NS         +          
Sbjct: 60  NIHEDIVLVSDVRGMKDYRL----LEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGI 115

Query: 145 MDVVISPYSFTSFDL 159
           +  ++   S+    +
Sbjct: 116 LTSMLRRASWNVIRI 130

PyMOL of d2c7fa1

>d1qw9a1 b.71.1.2 (A:5-17,A:385-501) Alpha-l-arabinofuranosidase {Bacillus stearothermophilus [TaxId: 1422]} Length = 130	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		179
d2c7fa1		131	Alpha-l-arabinofuranosidase {Clostridium thermocel	99.93
d1qw9a1		130	Alpha-l-arabinofuranosidase {Bacillus stearothermo	99.92
d1nofa1		106	Glycosyl hydrolase family 5 xylanase {Erwinia chry	97.61
d1ji1a2		83	Maltogenic amylase {Thermoactinomyces vulgaris, TV	96.52
d1wzla2		83	Maltogenic amylase {Thermoactinomyces vulgaris, TV	95.33
d1ea9c2		80	Maltogenic amylase {Bacillus sp., cyclomaltodextri	95.12
d1j0ha2		83	Neopullulanase {Bacillus stearothermophilus [TaxId	94.13
d1m7xa2		106	1,4-alpha-glucan branching enzyme {Escherichia col	92.95
d1uasa1		89	Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	92.53
d1szna1		103	Melibiase {Trichoderma reesei [TaxId: 51453]}	89.78
d1ktba1		95	Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	88.18
d1r46a1		98	Melibiase {Human (Homo sapiens) [TaxId: 9606]}	87.56

>d2c7fa1 b.71.1.2 (A:2-16,A:387-502) Alpha-l-arabinofuranosidase {Clostridium thermocellum [TaxId: 1515]}	Back information, alignment and structure

class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51
domain: Alpha-l-arabinofuranosidase
species: Clostridium thermocellum [TaxId: 1515]

Probab=99.93  E-value=7.6e-26  Score=167.39  Aligned_cols=116  Identities=17%  Similarity=0.122  Sum_probs=92.9

Q ss_pred             hHHHhhccCCCeEEEEEEeecCCC--------ceEEEEEEeccCCCCeeeEEEEEEeCCC-CcEEEEEEEccCCCCcccc
Q 030307           36 VQQFFRESSGATLLNATLLTNSSS--------SIVASAISWEDSENAKSYLRIKVVNLGS-SSVNLKVSVDGLGPNSIKL  106 (179)
Q Consensus        36 vf~lfs~~~g~~~l~~~v~~~~~~--------~l~~sa~~~~~s~~~~~~l~vkvVN~~~-~~~~v~i~l~g~~~~~~~~  106 (179)
                      ||+||.-++|. .|...++||+|.        .||++|++|++++    +++||+|||+. ++++++|+|+|+...    
T Consensus         7 ~~~~~k~~rG~-~L~~~v~sp~y~~~~~~~vp~ldasA~~d~~~g----~l~i~vVNrs~~e~~~v~i~l~g~~~~----   77 (131)
T d2c7fa1           7 VDKDYKIAEGI-VLQPVINSPLHDTSKHEDVTDIESVAIYNEEKE----EVTIFAVNRNIHEDIVLVSDVRGMKDY----   77 (131)
T ss_dssp             ECTTCEEEESE-EECCEEECCEECCSSCSSEESCEEEEEEETTTT----EEEEEEECCCTTSCEEEEEEESCC-------
T ss_pred             eeehhhhcCCc-EEEEEecCCCeecCCCCCCCeEEEEEEEcCCCC----EEEEEEEECCCCcCEEEEEEecCCCcc----
Confidence            56677778877 556689988753        3999999988765    49999999995 679999999998764    


Q ss_pred             cceEEEEEecCCCCCCCCCCCCCeEeeEeeEEEecCCeEEEEEcCceEEEEEEe
Q 030307          107 SGSTKTQLTSTNLKDENSFMEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLL  160 (179)
Q Consensus       107 ~~~~~~~L~~~d~~a~Nt~~~P~~V~p~~~~~~~~~~~~~~~lPa~Sv~vl~l~  160 (179)
                      +.+++++|+|+|+++.|||++|+.+.|....+++.++.++++|||+||+||||.
T Consensus        78 ~~~e~~~L~~~d~~a~NT~e~~~vvp~~~~~~~~~~~~l~~tlPp~S~~virLg  131 (131)
T d2c7fa1          78 RLLEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGILTSMLRRASWNVIRIG  131 (131)
T ss_dssp             CEEEEEEECCSCTTCBCBTTBCSSCCEECCC--CCSSEEEEEECSSCEEEEEEC
T ss_pred             cEEEEEEEeCCChhhhccCCCCcEecCcCcceEEeCCEEEEEECCCEEEEEEeC
Confidence            578899999999999999998765544444478889999999999999999984

PyMOL of d2c7fa1

>d1qw9a1 b.71.1.2 (A:5-17,A:385-501) Alpha-l-arabinofuranosidase {Bacillus stearothermophilus [TaxId: 1422]}	Back information, alignment and structure

>d1nofa1 b.71.1.2 (A:31-43,A:321-413) Glycosyl hydrolase family 5 xylanase {Erwinia chrysanthemi [TaxId: 556]}	Back information, alignment and structure

>d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]}	Back information, alignment and structure

>d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]}	Back information, alignment and structure

>d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]}	Back information, alignment and structure

>d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]}	Back information, alignment and structure

>d1m7xa2 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching enzyme {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	Back information, alignment and structure

>d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]}	Back information, alignment and structure

>d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure