Citrus Sinensis ID: 030313

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MDVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKST
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
MDVQKIEAFVRVWAALLLLLTACLVGldtqskyiFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRylgnskgsyRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKST
Flexible Loop (DISEMBL)
MDVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKST
Low Complexity Region (SEG)
MDVQKIEAFVRVWaallllltaclvglDTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKST
Disordered region (IsUnstruct)
*****IEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFL*****
Disordered Region (DISOPRED)
*DVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLY***********
Disordered Region (DISEMBL)
MDVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKST
Disordered Region (DISPRO)
MDVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYS**********
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKST
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	179	2.2.26 [Sep-21-2011]
B9IM09	181	CASP-like protein POPTRDR	yes	no	1.0	0.988	0.592	1e-57
Q5K4H9	180	CASP-like protein XL3 OS=	N/A	no	0.988	0.983	0.570	3e-53
C6SZ04	180	CASP-like protein 3 OS=Gl	yes	no	0.949	0.944	0.554	6e-46
Q8L8U9	175	CASP-like protein At4g258	yes	no	0.960	0.982	0.477	6e-43
D7MFW5	175	CASP-like protein ARALYDR	N/A	no	0.949	0.971	0.466	1e-41
A7Q6G6	206	CASP-like protein VIT_11s	yes	no	1.0	0.868	0.519	4e-39
A7R385	202	CASP-like protein GSVIVT0	no	no	0.916	0.811	0.391	3e-21
Q8L924	201	CASP-like protein At2g357	no	no	0.927	0.825	0.373	6e-21
Q67W83	194	CASP-like protein Os06g06	yes	no	0.787	0.726	0.429	4e-20
B9HD38	202	CASP-like protein POPTRDR	no	no	0.899	0.797	0.384	6e-20

>sp|B9IM09|CSPLG_POPTR CASP-like protein POPTRDRAFT_578614 OS=Populus trichocarpa GN=POPTRDRAFT_578614 PE=3 SV=2

 Score =  221 bits (564), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 106/179 (59%), Positives = 135/179 (75%)

Query: 1   MDVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAA 60
           +++ KIEA +R  A LLL+ TACLVGLD+Q+K++   ++++TYK+LHAL  LVYV + AA
Sbjct: 3   LEIPKIEAILRGIAILLLVSTACLVGLDSQTKFVIVYEKEVTYKDLHALVVLVYVDAVAA 62

Query: 61  GYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGM 120
            YNLLQL R    +   GN KGSYRYL+W  ++LDQ+  Y  F  +SAA++HSVL ++G 
Sbjct: 63  AYNLLQLCRCSVSALSKGNFKGSYRYLSWACFVLDQLAAYTTFAAHSAALQHSVLGITGA 122

Query: 121 KEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKST 179
           K FQWMKWCN+FTRFCFQIGGAL  GY A  LMV+ + ISAFNLFRLYS + FLRLK T
Sbjct: 123 KVFQWMKWCNRFTRFCFQIGGALTCGYIASVLMVMISFISAFNLFRLYSPKHFLRLKGT 181

Populus trichocarpa (taxid: 3694)

>sp|Q5K4H9|CSPL2_GOSHI CASP-like protein XL3 OS=Gossypium hirsutum GN=XL3 PE=2 SV=1

 Score =  207 bits (527), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/177 (57%), Positives = 129/177 (72%)

Query: 1   MDVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAA 60
           + +QKIEA +R+   ++L+LTACL+GLD+Q+K IFYV +K ++K+L AL  L+Y+ S AA
Sbjct: 3   LSIQKIEALIRLSTIVMLVLTACLIGLDSQTKVIFYVQKKASFKDLRALVGLLYITSLAA 62

Query: 61  GYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGM 120
            YNLLQL  S F + Y G S  SY YLAW+ Y+LDQ VVY  F  N AA+EHS L L+G 
Sbjct: 63  AYNLLQLCCSSFSASYKGTSLQSYAYLAWLRYILDQAVVYAVFAGNLAALEHSFLVLTGE 122

Query: 121 KEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLK 177
           + FQW+KWCNK+TRFC QIGG+L+ G+ A  LM    SISAFNLFR YS  KF+ LK
Sbjct: 123 ENFQWLKWCNKYTRFCTQIGGSLLCGFVASLLMFSIASISAFNLFRQYSPTKFMHLK 179

Gossypium hirsutum (taxid: 3635)

>sp|C6SZ04|CSPL3_SOYBN CASP-like protein 3 OS=Glycine max PE=2 SV=1

 Score =  183 bits (464), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 96/173 (55%), Positives = 127/173 (73%), Gaps = 3/173 (1%)

Query: 7   EAFVRVWAALLLLLTACLVGLDTQSKYIFY-VDRKITYKELHALGALVYVASAAAGYNLL 65
           E  +RV A L+L+LTACLV LDTQ+K +F  +++K TYK+L+AL  LVYV  AAAGYNLL
Sbjct: 9   EVCLRVSAILVLVLTACLVALDTQTKVVFVSIEKKATYKDLNALKILVYVTCAAAGYNLL 68

Query: 66  QLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQW 125
            L +    SR   N KGSY  +AW+ + LDQ+ VY+ F  N+A +  +VLA+SG + FQW
Sbjct: 69  LLCKHSIWSR--KNFKGSYLCMAWICFSLDQIAVYMTFAANTATMGAAVLAISGSEAFQW 126

Query: 126 MKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKS 178
           +K C+KFTRFC +IGGAL+ GYAA  LM L ++ISA+ +FR+YS + FLRLKS
Sbjct: 127 LKVCDKFTRFCVEIGGALLCGYAASMLMALISTISAYKVFRMYSPKWFLRLKS 179

Glycine max (taxid: 3847)

>sp|Q8L8U9|CSPLS_ARATH CASP-like protein At4g25830 OS=Arabidopsis thaliana GN=At4g25830 PE=2 SV=1

 Score =  173 bits (438), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 86/180 (47%), Positives = 120/180 (66%), Gaps = 8/180 (4%)

Query: 1   MDVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAA 60
           + +++ E  +R+     LLLT+CL+GLD+Q+K I Y+ + ++++ L AL A +Y+    A
Sbjct: 2   VKLRETEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVA 61

Query: 61  GYNLLQLGRSVF-VSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSG 119
            YNL+QLG   + V +   N K       W SYLLDQ   Y+ F   SAA +HS+L ++G
Sbjct: 62  AYNLVQLGLGWYNVEQKTSNPK-------WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTG 114

Query: 120 MKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKST 179
            +E QWMKWC KFTRFCFQ+G A++  Y A ALMVL +SISAFNLFRLYS ++F R KS+
Sbjct: 115 SRELQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKRFFRFKSS 174

Arabidopsis thaliana (taxid: 3702)

>sp|D7MFW5|CSPL4_ARALL CASP-like protein ARALYDRAFT_657503 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_657503 PE=3 SV=1

 Score =  169 bits (427), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 83/178 (46%), Positives = 119/178 (66%), Gaps = 8/178 (4%)

Query: 3   VQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGY 62
           +++ E  +R+     +LL++CL+GLD+Q+K I Y+ +K++++ L AL A +Y+    A Y
Sbjct: 4   LRETEVILRLCIVFFILLSSCLIGLDSQTKEIAYIHKKVSFRYLLALEAELYINVVVAAY 63

Query: 63  NLLQLGRSVF-VSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMK 121
           NL+Q+G   + V +   N K       W SYLLDQ   Y+ F   SAA +HS+L ++G +
Sbjct: 64  NLVQIGLGWYNVEQKTSNPK-------WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSR 116

Query: 122 EFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKST 179
           E QWMKWC KFTRFCFQ+G A++  Y A ALMVL +SISAFNLFRLYS ++F   KS+
Sbjct: 117 ELQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKRFFSFKSS 174

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

>sp|A7Q6G6|CSPL9_VITVI CASP-like protein VIT_11s0052g01140 OS=Vitis vinifera GN=VIT_11s0052g01140 PE=2 SV=1

 Score =  160 bits (405), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 94/181 (51%), Positives = 129/181 (71%), Gaps = 2/181 (1%)

Query: 1   MDVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKI-TYKELHALGALVYVASAA 59
           + + + EAF+R++A L+L+LTACL+G DTQ+K +F   +K  T+++L AL  +VYV S A
Sbjct: 26  ISLARAEAFLRLFAILVLVLTACLLGFDTQTKLLFSTIKKTATFRDLGALQVVVYVDSVA 85

Query: 60  AGYNLLQLGRSVFVSRYLGN-SKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALS 118
           AGYNLLQLGR    ++  G     SY  L WV +LLDQ  VY  F  N+AA++ S++A++
Sbjct: 86  AGYNLLQLGRGFISAKLKGKLINVSYVTLPWVCFLLDQAAVYTVFSANTAALQASIIAVT 145

Query: 119 GMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKS 178
           G    QWMK CN++TRFC Q+GGAL+SGY A  LMVL +S+SAF+LFRLYS ++F  LK 
Sbjct: 146 GESSLQWMKVCNRYTRFCIQVGGALLSGYLASLLMVLLSSLSAFSLFRLYSPKQFHLLKP 205

Query: 179 T 179
           T
Sbjct: 206 T 206

Vitis vinifera (taxid: 29760)

>sp|A7R385|CSPLC_VITVI CASP-like protein GSVIVT00013502001 OS=Vitis vinifera GN=GSVIVT00013502001 PE=2 SV=1

 Score =  101 bits (251), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 89/166 (53%), Gaps = 2/166 (1%)

Query: 7   EAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQ 66
           E  +R     L +L A LVG DTQ K IF + +K  + ++ AL  LV     AA Y+L+Q
Sbjct: 32  ELVLRCVICGLGILAAVLVGTDTQVKVIFTIQKKAKFTDMKALVFLVIANGIAAAYSLIQ 91

Query: 67  LGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWM 126
            G    VS   G+   S + LAW  +  DQ++ Y+     +AA + SV    G  E QWM
Sbjct: 92  -GLRCVVSMVRGSVLFS-KPLAWAIFSGDQVIAYLTLAAVAAAAQSSVFGEFGQPELQWM 149

Query: 127 KWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEK 172
           K CN + +FC Q+G  +VS       MV+ + ISAF+LFRLY   K
Sbjct: 150 KICNMYGKFCNQVGEGIVSAVGVSLSMVILSGISAFSLFRLYGGNK 195

Vitis vinifera (taxid: 29760)

>sp|Q8L924|CSPL7_ARATH CASP-like protein At2g35760 OS=Arabidopsis thaliana GN=At2g35760 PE=2 SV=2

 Score =  100 bits (248), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 91/174 (52%), Gaps = 8/174 (4%)

Query: 2   DVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAG 61
            V+  E  +R    +L L+ A L+  D Q + IF + +K  + ++ AL  LV V   AAG
Sbjct: 26  KVRVTELILRCLVCVLALVAAILIATDVQVREIFMIQKKAKFTDMKALVLLVVVNGIAAG 85

Query: 62  YNLLQLGRSVFVSRYLGNSKGSY---RYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALS 118
           Y+L+Q  R V     +G  KG     + LAW  +  DQ V Y+     +AA + +  A  
Sbjct: 86  YSLVQAVRCV-----VGLMKGRVLFSKPLAWAIFFGDQAVAYLCVAGVAAAAQSAAFAKL 140

Query: 119 GMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEK 172
           G  E QWMK CN + +FC Q+G  + S   AC  MVL + ISAF +FRLY   K
Sbjct: 141 GEPELQWMKICNMYGKFCNQVGEGIASALFACIGMVLISCISAFGVFRLYGGSK 194

Arabidopsis thaliana (taxid: 3702)

>sp|Q67W83|CSPLD_ORYSJ CASP-like protein Os06g0656300 OS=Oryza sativa subsp. japonica GN=Os06g0656300 PE=2 SV=1

 Score = 97.4 bits (241), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/142 (42%), Positives = 86/142 (60%), Gaps = 1/142 (0%)

Query: 28  DTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYL-GNSKGSYRY 86
           +TQ++ + ++ +K T K++ AL  L   A+AAAGY+LLQL R  ++SR+  G      R 
Sbjct: 40  NTQTETVLFIRKKATVKDVQALWVLAMAAAAAAGYHLLQLLRCFYLSRFADGKPCRHRRA 99

Query: 87  LAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSG 146
           +AW+ +LLD+   YI F T  AA +  V+AL G    QW K CN +TRFC Q+ G+LV  
Sbjct: 100 IAWLCFLLDKGCAYITFATTVAAAQACVVALYGTHALQWTKLCNIYTRFCEQVAGSLVCA 159

Query: 147 YAACALMVLATSISAFNLFRLY 168
             A     L + +SA NLFRLY
Sbjct: 160 MLAAVGTALLSVVSARNLFRLY 181

Oryza sativa subsp. japonica (taxid: 39947)

>sp|B9HD38|CSPLE_POPTR CASP-like protein POPTRDRAFT_818956 OS=Populus trichocarpa GN=POPTRDRAFT_818956 PE=3 SV=1

 Score = 97.1 bits (240), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 91/169 (53%), Gaps = 8/169 (4%)

Query: 7   EAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQ 66
           E  +R     L +L A LVG DTQ K IF + +K  + ++ AL  LV     AA Y+L+Q
Sbjct: 32  ELVLRCVICALGVLAAVLVGTDTQVKEIFSIQKKARFTDMKALVFLVVANGIAAAYSLVQ 91

Query: 67  LGRSVFVSRYLGNSKGSY---RYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEF 123
             R V     +G  KGS    + LAWV +  DQM+ Y+     +AAV+ +  A  G  + 
Sbjct: 92  GVRCV-----VGMVKGSVLFSKPLAWVIFSGDQMMAYLTLSAVAAAVQSASFAKLGQPDL 146

Query: 124 QWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEK 172
           QWMK CN + +FC Q+G  + S       MV+ + IS+F+LFRLY   K
Sbjct: 147 QWMKICNMYGKFCNQVGEGIASALLVSVSMVVLSCISSFSLFRLYGGNK 195

Populus trichocarpa (taxid: 3694)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
341958686	181	RecName: Full=CASP-like protein POPTRDRA	1.0	0.988	0.592	6e-56
75106791	180	RecName: Full=CASP-like protein XL3 gi|5	0.988	0.983	0.570	1e-51
351725485	180	CASP-like protein 3 [Glycine max] gi|288	0.949	0.944	0.554	3e-44
357479727	184	hypothetical protein MTR_4g128520 [Medic	0.966	0.940	0.505	3e-42
18416627	175	uncharacterized protein [Arabidopsis tha	0.960	0.982	0.477	3e-41
356562454	180	PREDICTED: CASP-like protein 3-like [Gly	0.949	0.944	0.537	4e-41
297803534	175	predicted protein [Arabidopsis lyrata su	0.949	0.971	0.466	5e-40
4539301	618	putative mitochondrial protein [Arabidop	0.916	0.265	0.476	1e-38
226713185	206	RecName: Full=CASP-like protein VIT_11s0	1.0	0.868	0.519	2e-37
225446090	188	PREDICTED: CASP-like protein VIT_11s0052	1.0	0.952	0.519	3e-37

>gi|341958686|sp|B9IM09.2|CSPLG_POPTR RecName: Full=CASP-like protein POPTRDRAFT_578614

 Score =  221 bits (564), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 106/179 (59%), Positives = 135/179 (75%)

Query: 1   MDVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAA 60
           +++ KIEA +R  A LLL+ TACLVGLD+Q+K++   ++++TYK+LHAL  LVYV + AA
Sbjct: 3   LEIPKIEAILRGIAILLLVSTACLVGLDSQTKFVIVYEKEVTYKDLHALVVLVYVDAVAA 62

Query: 61  GYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGM 120
            YNLLQL R    +   GN KGSYRYL+W  ++LDQ+  Y  F  +SAA++HSVL ++G 
Sbjct: 63  AYNLLQLCRCSVSALSKGNFKGSYRYLSWACFVLDQLAAYTTFAAHSAALQHSVLGITGA 122

Query: 121 KEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKST 179
           K FQWMKWCN+FTRFCFQIGGAL  GY A  LMV+ + ISAFNLFRLYS + FLRLK T
Sbjct: 123 KVFQWMKWCNRFTRFCFQIGGALTCGYIASVLMVMISFISAFNLFRLYSPKHFLRLKGT 181

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75106791|sp|Q5K4H9.1|CSPL2_GOSHI RecName: Full=CASP-like protein XL3 gi|57282656|emb|CAE75666.1| putative membrane protein [Gossypium hirsutum]

 Score =  207 bits (527), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 101/177 (57%), Positives = 129/177 (72%)

Query: 1   MDVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAA 60
           + +QKIEA +R+   ++L+LTACL+GLD+Q+K IFYV +K ++K+L AL  L+Y+ S AA
Sbjct: 3   LSIQKIEALIRLSTIVMLVLTACLIGLDSQTKVIFYVQKKASFKDLRALVGLLYITSLAA 62

Query: 61  GYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGM 120
            YNLLQL  S F + Y G S  SY YLAW+ Y+LDQ VVY  F  N AA+EHS L L+G 
Sbjct: 63  AYNLLQLCCSSFSASYKGTSLQSYAYLAWLRYILDQAVVYAVFAGNLAALEHSFLVLTGE 122

Query: 121 KEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLK 177
           + FQW+KWCNK+TRFC QIGG+L+ G+ A  LM    SISAFNLFR YS  KF+ LK
Sbjct: 123 ENFQWLKWCNKYTRFCTQIGGSLLCGFVASLLMFSIASISAFNLFRQYSPTKFMHLK 179

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725485|ref|NP_001237350.1| CASP-like protein 3 [Glycine max] gi|288559175|sp|C6SZ04.1|CSPL3_SOYBN RecName: Full=CASP-like protein 3 gi|255628265|gb|ACU14477.1| unknown [Glycine max]

 Score =  183 bits (464), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 96/173 (55%), Positives = 127/173 (73%), Gaps = 3/173 (1%)

Query: 7   EAFVRVWAALLLLLTACLVGLDTQSKYIFY-VDRKITYKELHALGALVYVASAAAGYNLL 65
           E  +RV A L+L+LTACLV LDTQ+K +F  +++K TYK+L+AL  LVYV  AAAGYNLL
Sbjct: 9   EVCLRVSAILVLVLTACLVALDTQTKVVFVSIEKKATYKDLNALKILVYVTCAAAGYNLL 68

Query: 66  QLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQW 125
            L +    SR   N KGSY  +AW+ + LDQ+ VY+ F  N+A +  +VLA+SG + FQW
Sbjct: 69  LLCKHSIWSR--KNFKGSYLCMAWICFSLDQIAVYMTFAANTATMGAAVLAISGSEAFQW 126

Query: 126 MKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKS 178
           +K C+KFTRFC +IGGAL+ GYAA  LM L ++ISA+ +FR+YS + FLRLKS
Sbjct: 127 LKVCDKFTRFCVEIGGALLCGYAASMLMALISTISAYKVFRMYSPKWFLRLKS 179

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357479727|ref|XP_003610149.1| hypothetical protein MTR_4g128520 [Medicago truncatula] gi|355511204|gb|AES92346.1| hypothetical protein MTR_4g128520 [Medicago truncatula]

 Score =  176 bits (446), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 89/176 (50%), Positives = 123/176 (69%), Gaps = 3/176 (1%)

Query: 5   KIEAFVRVWAALLLLLTACLVGLDTQSKY-IFYVDRKITYKELHALGALVYVASAAAGYN 63
           K E  +RV A L L+ TAC+V  DT++K  I  + +K TYK+L AL  L+YV SAAAGYN
Sbjct: 7   KGEVLLRVSAILFLVSTACIVAFDTETKVVILMIKKKATYKDLDALKILLYVTSAAAGYN 66

Query: 64  LLQLGRSVF--VSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMK 121
           +LQL +  F   S     +   Y ++AW+S+LLDQ+VVY+ F TN++A E  + AL+G +
Sbjct: 67  MLQLCKHSFSACSTIRNFNDSYYMHMAWISFLLDQIVVYLTFATNTSAFEACLFALTGSE 126

Query: 122 EFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLK 177
            FQWMK CNKFTRFC+QIGGA++  Y A  LM + ++ISA+ + R+YS ++FLRLK
Sbjct: 127 AFQWMKVCNKFTRFCYQIGGAILCCYIASILMAMISTISAYKVLRMYSPKRFLRLK 182

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18416627|ref|NP_567729.1| uncharacterized protein [Arabidopsis thaliana] gi|75154429|sp|Q8L8U9.1|CSPLS_ARATH RecName: Full=CASP-like protein At4g25830 gi|21618058|gb|AAM67108.1| unknown [Arabidopsis thaliana] gi|51968884|dbj|BAD43134.1| unknown protein [Arabidopsis thaliana] gi|51969606|dbj|BAD43495.1| unknown protein [Arabidopsis thaliana] gi|51970146|dbj|BAD43765.1| unknown protein [Arabidopsis thaliana] gi|51970164|dbj|BAD43774.1| unknown protein [Arabidopsis thaliana] gi|51970320|dbj|BAD43852.1| unknown protein [Arabidopsis thaliana] gi|110739109|dbj|BAF01471.1| hypothetical protein [Arabidopsis thaliana] gi|332659719|gb|AEE85119.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  173 bits (438), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 86/180 (47%), Positives = 120/180 (66%), Gaps = 8/180 (4%)

Query: 1   MDVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAA 60
           + +++ E  +R+     LLLT+CL+GLD+Q+K I Y+ + ++++ L AL A +Y+    A
Sbjct: 2   VKLRETEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVA 61

Query: 61  GYNLLQLGRSVF-VSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSG 119
            YNL+QLG   + V +   N K       W SYLLDQ   Y+ F   SAA +HS+L ++G
Sbjct: 62  AYNLVQLGLGWYNVEQKTSNPK-------WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTG 114

Query: 120 MKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKST 179
            +E QWMKWC KFTRFCFQ+G A++  Y A ALMVL +SISAFNLFRLYS ++F R KS+
Sbjct: 115 SRELQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKRFFRFKSS 174

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562454|ref|XP_003549486.1| PREDICTED: CASP-like protein 3-like [Glycine max]

 Score =  172 bits (437), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/173 (53%), Positives = 129/173 (74%), Gaps = 3/173 (1%)

Query: 7   EAFVRVWAALLLLLTACLVGLDTQSKYIFY-VDRKITYKELHALGALVYVASAAAGYNLL 65
           E ++RV A L+L+LTACLV LDTQ+K +F  +++K T ++L+AL  LVYV SA+AGYNLL
Sbjct: 9   EVYLRVSAILVLVLTACLVALDTQTKVVFLSIEKKATCRDLNALKILVYVTSASAGYNLL 68

Query: 66  QLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQW 125
            L +    SR   N KGSY  +AW+ +LLDQ+ VY+ F  N+AA+  ++LA++G   FQW
Sbjct: 69  LLCKHSIWSR--KNFKGSYLCMAWICFLLDQIAVYMTFAANTAAMGAAMLAITGSDAFQW 126

Query: 126 MKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKS 178
           +K C+KFTRFC QIGGAL+ GYAA  +M L ++ISA+ +FR+YS + FLRLK+
Sbjct: 127 LKVCDKFTRFCVQIGGALLCGYAASIIMALISTISAYQVFRMYSPKWFLRLKN 179

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297803534|ref|XP_002869651.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|341958571|sp|D7MFW5.1|CSPL4_ARALL RecName: Full=CASP-like protein ARALYDRAFT_657503 gi|297315487|gb|EFH45910.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 83/178 (46%), Positives = 119/178 (66%), Gaps = 8/178 (4%)

Query: 3   VQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGY 62
           +++ E  +R+     +LL++CL+GLD+Q+K I Y+ +K++++ L AL A +Y+    A Y
Sbjct: 4   LRETEVILRLCIVFFILLSSCLIGLDSQTKEIAYIHKKVSFRYLLALEAELYINVVVAAY 63

Query: 63  NLLQLGRSVF-VSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMK 121
           NL+Q+G   + V +   N K       W SYLLDQ   Y+ F   SAA +HS+L ++G +
Sbjct: 64  NLVQIGLGWYNVEQKTSNPK-------WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSR 116

Query: 122 EFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKST 179
           E QWMKWC KFTRFCFQ+G A++  Y A ALMVL +SISAFNLFRLYS ++F   KS+
Sbjct: 117 ELQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKRFFSFKSS 174

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4539301|emb|CAB39604.1| putative mitochondrial protein [Arabidopsis thaliana] gi|7269434|emb|CAB79438.1| putative mitochondrial protein [Arabidopsis thaliana]

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 82/172 (47%), Positives = 114/172 (66%), Gaps = 8/172 (4%)

Query: 3   VQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGY 62
           +++ E  +R+     LLLT+CL+GLD+Q+K I Y+ + ++++ L AL A +Y+    A Y
Sbjct: 4   LRETEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAAY 63

Query: 63  NLLQLGRSVF-VSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMK 121
           NL+QLG   + V +   N K       W SYLLDQ   Y+ F   SAA +HS+L ++G +
Sbjct: 64  NLVQLGLGWYNVEQKTSNPK-------WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSR 116

Query: 122 EFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKF 173
           E QWMKWC KFTRFCFQ+G A++  Y A ALMVL +SISAFNLFRLYS ++ 
Sbjct: 117 ELQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKQI 168

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226713185|sp|A7Q6G6.1|CSPL9_VITVI RecName: Full=CASP-like protein VIT_11s0052g01140

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/181 (51%), Positives = 129/181 (71%), Gaps = 2/181 (1%)

Query: 1   MDVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKI-TYKELHALGALVYVASAA 59
           + + + EAF+R++A L+L+LTACL+G DTQ+K +F   +K  T+++L AL  +VYV S A
Sbjct: 26  ISLARAEAFLRLFAILVLVLTACLLGFDTQTKLLFSTIKKTATFRDLGALQVVVYVDSVA 85

Query: 60  AGYNLLQLGRSVFVSRYLGN-SKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALS 118
           AGYNLLQLGR    ++  G     SY  L WV +LLDQ  VY  F  N+AA++ S++A++
Sbjct: 86  AGYNLLQLGRGFISAKLKGKLINVSYVTLPWVCFLLDQAAVYTVFSANTAALQASIIAVT 145

Query: 119 GMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKS 178
           G    QWMK CN++TRFC Q+GGAL+SGY A  LMVL +S+SAF+LFRLYS ++F  LK 
Sbjct: 146 GESSLQWMKVCNRYTRFCIQVGGALLSGYLASLLMVLLSSLSAFSLFRLYSPKQFHLLKP 205

Query: 179 T 179
           T
Sbjct: 206 T 206

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446090|ref|XP_002273403.1| PREDICTED: CASP-like protein VIT_11s0052g01140-like [Vitis vinifera]

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/181 (51%), Positives = 129/181 (71%), Gaps = 2/181 (1%)

Query: 1   MDVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKI-TYKELHALGALVYVASAA 59
           + + + EAF+R++A L+L+LTACL+G DTQ+K +F   +K  T+++L AL  +VYV S A
Sbjct: 8   ISLARAEAFLRLFAILVLVLTACLLGFDTQTKLLFSTIKKTATFRDLGALQVVVYVDSVA 67

Query: 60  AGYNLLQLGRSVFVSRYLGN-SKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALS 118
           AGYNLLQLGR    ++  G     SY  L WV +LLDQ  VY  F  N+AA++ S++A++
Sbjct: 68  AGYNLLQLGRGFISAKLKGKLINVSYVTLPWVCFLLDQAAVYTVFSANTAALQASIIAVT 127

Query: 119 GMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEKFLRLKS 178
           G    QWMK CN++TRFC Q+GGAL+SGY A  LMVL +S+SAF+LFRLYS ++F  LK 
Sbjct: 128 GESSLQWMKVCNRYTRFCIQVGGALLSGYLASLLMVLLSSLSAFSLFRLYSPKQFHLLKP 187

Query: 179 T 179
           T
Sbjct: 188 T 188

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
TAIR|locus:2117502	175	AT4G25830 "AT4G25830" [Arabido	0.810	0.828	0.496	1.9e-35
TAIR|locus:2058744	201	AT2G35760 "AT2G35760" [Arabido	0.782	0.696	0.391	4.9e-21
TAIR|locus:505006479	182	AT4G16442 "AT4G16442" [Arabido	0.782	0.769	0.351	3.2e-17
TAIR|locus:2020297	204	AT1G17200 "AT1G17200" [Arabido	0.659	0.578	0.269	3.3e-08
TAIR|locus:2128649	197	AT4G20390 "AT4G20390" [Arabido	0.731	0.664	0.288	8.7e-08
TAIR|locus:2130479	193	AT4G15610 "AT4G15610" [Arabido	0.743	0.689	0.288	7e-06
TAIR|locus:2150986	187	CASP5 "Casparian strip membran	0.659	0.631	0.304	8.5e-06
TAIR|locus:2035791	209	AT1G14160 "AT1G14160" [Arabido	0.681	0.583	0.299	9.9e-06
TAIR|locus:2163386	197	AT5G44550 [Arabidopsis thalian	0.608	0.553	0.316	5.2e-05
TAIR|locus:2091045	178	AT3G14380 "AT3G14380" [Arabido	0.648	0.651	0.272	6.2e-05

TAIR|locus:2117502 AT4G25830 "AT4G25830" [Arabidopsis thaliana (taxid:3702)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 76/153 (49%), Positives = 102/153 (66%)

Query:    28 DTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVF-VSRYLGNSKGSYRY 86
             D+Q+K I Y+ + ++++ L AL A +Y+    A YNL+QLG   + V +   N K     
Sbjct:    29 DSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAAYNLVQLGLGWYNVEQKTSNPK----- 83

Query:    87 LAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSG 146
               W SYLLDQ   Y+ F   SAA +HS+L ++G +E QWMKWC KFTRFCFQ+G A++  
Sbjct:    84 --WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSRELQWMKWCYKFTRFCFQMGSAIILN 141

Query:   147 YAACALMVLATSISAFNLFRLYSSEKFLRLKST 179
             Y A ALMVL +SISAFNLFRLYS ++F R KS+
Sbjct:   142 YIAAALMVLLSSISAFNLFRLYSPKRFFRFKSS 174

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0005747 "mitochondrial respiratory chain complex I" evidence=IBA

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=IBA

GO:0008150 "biological_process" evidence=ND

GO:0045333 "cellular respiration" evidence=IBA

TAIR|locus:2058744 AT2G35760 "AT2G35760" [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 58/148 (39%), Positives = 79/148 (53%)

Query:    28 DTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYRY- 86
             D Q + IF + +K  + ++ AL  LV V   AAGY+L+Q  R V     +G  KG   + 
Sbjct:    52 DVQVREIFMIQKKAKFTDMKALVLLVVVNGIAAGYSLVQAVRCV-----VGLMKGRVLFS 106

Query:    87 --LAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALV 144
               LAW  +  DQ V Y+     +AA + +  A  G  E QWMK CN + +FC Q+G  + 
Sbjct:   107 KPLAWAIFFGDQAVAYLCVAGVAAAAQSAAFAKLGEPELQWMKICNMYGKFCNQVGEGIA 166

Query:   145 SGYAACALMVLATSISAFNLFRLYSSEK 172
             S   AC  MVL + ISAF +FRLY   K
Sbjct:   167 SALFACIGMVLISCISAFGVFRLYGGSK 194

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0015996 "chlorophyll catabolic process" evidence=RCA

TAIR|locus:505006479 AT4G16442 "AT4G16442" [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 52/148 (35%), Positives = 76/148 (51%)

Query:    28 DTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYRY- 86
             DT+ K IF + +   Y ++ A+  LV     AA Y+LLQ  R V     +G  KG   + 
Sbjct:    33 DTEVKLIFTIKKTAKYTDMKAVVFLVVANGIAAVYSLLQSVRCV-----VGTMKGKVLFS 87

Query:    87 --LAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALV 144
               LAW  +  DQ + Y+     +A  E  V+A  G ++ QWM+ C  + +FC Q+   + 
Sbjct:    88 KPLAWAFFSGDQAMAYLNVAAIAATAESGVIAREGEEDLQWMRVCTMYGKFCNQMAIGVS 147

Query:   145 SGYAACALMVLATSISAFNLFRLYSSEK 172
             S   A   MV  + ISAF+LFRLY + K
Sbjct:   148 SALLASIAMVFVSCISAFSLFRLYGATK 175

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2020297 AT1G17200 "AT1G17200" [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 34/126 (26%), Positives = 58/126 (46%)

Query:    41 ITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVY 100
             I+Y  L A   LV+     AGY+LL    S  ++    +S    R   W  + LDQ++ Y
Sbjct:    64 ISYSNLTAFRYLVHANGICAGYSLL----SAAIAAMPRSSSTMPR--VWTFFCLDQLLTY 117

Query:   101 IAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQI-GGALVSGYAACALMVLATSI 159
             +     + + E   LA +G     W   C+ +  FC +     +++ +  C  +VL+  I
Sbjct:   118 LVLAAGAVSAEVLYLAYNGDSAITWSDACSSYGGFCHRATASVIITFFVVCFYIVLSL-I 176

Query:   160 SAFNLF 165
             S++ LF
Sbjct:   177 SSYKLF 182

GO:0005515 "protein binding" evidence=IPI

GO:0080167 "response to karrikin" evidence=IEP

GO:0006949 "syncytium formation" evidence=RCA

TAIR|locus:2128649 AT4G20390 "AT4G20390" [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 41/142 (28%), Positives = 71/142 (50%)

Query:    41 ITYKELHALGALVYV-ASAAAGY-NLLQLGRSVFVSRYLGNSKGSYRYLAWVSY-LLDQM 97
             +T K  H    + +V A+    + NLL +   +F SR L      Y+ L  +S  +LD +
Sbjct:    60 LTAKFQHTPAFVFFVIANVMVSFHNLLMIVVQIF-SRKL-----EYKGLRLLSIAILDML 113

Query:    98 VVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLAT 157
                +     +AAV  + L  +G K  +W K C++FT +C    GA+++ +A   LM+L +
Sbjct:   114 NATLVSAAANAAVFVAELGKNGNKHAKWNKVCDRFTTYCDHGAGAIIAAFAGVILMLLVS 173

Query:   158 SISAFNLFRLYSSEKFLRLKST 179
             ++S   L  L +S+ F    +T
Sbjct:   174 AVSISRL--LINSKNFSTTATT 193

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0000041 "transition metal ion transport" evidence=RCA

TAIR|locus:2130479 AT4G15610 "AT4G15610" [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 41/142 (28%), Positives = 68/142 (47%)

Query:    30 QSKYIFYVDR--KITYKELHALGALVY--VA-SAAAGYNLLQLGRSVFVSRYLGNSKGSY 84
             Q+K IF      +I   E     AL+Y  VA S A  Y+++     V VS +  +S  + 
Sbjct:    53 QTKNIFLPGTPIRIPAAEFTNSPALIYFVVALSVACFYSIVST--FVTVSAFKKHSCSAV 110

Query:    85 RYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALV 144
               L     ++D ++V I      A    + L L G KE +W K C+ + +FC  +GGA+ 
Sbjct:   111 LLLNLA--IMDAVMVGIVASATGAGGGVAYLGLKGNKEVRWGKICHIYDKFCRHVGGAIA 168

Query:   145 SGYAACALMVLATSISAFNLFR 166
                 A  +++L + IS  +L++
Sbjct:   169 VSLFASVVLLLLSIISVLSLYK 190

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2150986 CASP5 "Casparian strip membrane domain protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 8.5e-06, P = 8.5e-06
 Identities = 38/125 (30%), Positives = 60/125 (48%)

Query:    43 YKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLD-QMVVYI 101
             Y +L AL   V   +  +GY +L L  + FV      ++ + R L     +LD  M+  +
Sbjct:    67 YNDLPALTFFVVANAVVSGYLILSLTLA-FVHIVKRKTQNT-RILL---IILDVAMLGLL 121

Query:   102 AFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISA 161
               G +SAA     LA +G  +  W   C +F  FC +I G+L+  + A  L++L   +SA
Sbjct:   122 TSGASSAAAI-VYLAHNGNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSA 180

Query:   162 FNLFR 166
               L R
Sbjct:   181 IALSR 185

GO:0005739 "mitochondrion" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2035791 AT1G14160 "AT1G14160" [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 9.9e-06, P = 9.9e-06
 Identities = 38/127 (29%), Positives = 58/127 (45%)

Query:    40 KITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVV 99
             K+ Y +L  L   V   + + GY +L L  S+F   +   +K S   L  V  +   M+ 
Sbjct:    87 KVKYSDLPTLMFFVVANAISGGYLVLSLPVSIF-HIFSTQAKTSRIILLVVDTV---MLA 142

Query:   100 YIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSI 159
              ++ G  SAA     LA  G     W   C +F  FC +I G+L+  + A  L++L    
Sbjct:   143 LVSSGA-SAATATVYLAHEGNTTANWPPICQQFDGFCERISGSLIGSFCAVILLMLIVIN 201

Query:   160 SAFNLFR 166
             SA +L R
Sbjct:   202 SAISLSR 208

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2163386 AT5G44550 [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 5.2e-05, P = 5.2e-05
 Identities = 38/120 (31%), Positives = 62/120 (51%)

Query:    55 VASAAAGY-NLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQM-VVYIAFGTNSAAVEH 112
             VA+A   + NLL +   +F  +      G +R L+ V+ +LD + V  I+   N+AA   
Sbjct:    75 VANAMVSFHNLLMIALQIFGGKM--EFTG-FRLLS-VA-ILDMLNVTLISAAANAAAFMA 129

Query:   113 SVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLFRLYSSEK 172
              V   +G K  +W K C++F  +C    GAL++ +A   LM++   ISA ++ RL    K
Sbjct:   130 EV-GKNGNKHARWDKICDRFATYCDHGAGALIAAFAGVILMLI---ISAASISRLVQPNK 185

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2091045 AT3G14380 "AT3G14380" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 6.2e-05, P = 6.2e-05
 Identities = 34/125 (27%), Positives = 56/125 (44%)

Query:    49 LGALVYVASA---AAGYNLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGT 105
             +GA +Y+ SA    A Y+LL       ++     SK   R L    +LLDQ+V Y+    
Sbjct:    59 IGAFMYLVSANGVCAAYSLLSA--LAILALPCPISKVQVRTL----FLLDQVVTYVVLAA 112

Query:   106 NSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNLF 165
              + + E   LA  G     W   C+ +  FC     ++V  +    L +L + IS++ LF
Sbjct:   113 GAVSAETVYLAYYGNIPITWSSACDSYGSFCHNALISVVFTFVVSLLYMLLSLISSYRLF 172

Query:   166 RLYSS 170
               + +
Sbjct:   173 TRFEA 177

GO:0016020 "membrane" evidence=ISS

GO:0010227 "floral organ abscission" evidence=IEP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8L8U9	CSPLS_ARATH	No assigned EC number	0.4777	0.9608	0.9828	yes	no
Q5K4H9	CSPL2_GOSHI	No assigned EC number	0.5706	0.9888	0.9833	N/A	no
A7Q6G6	CSPL9_VITVI	No assigned EC number	0.5193	1.0	0.8689	yes	no
B9IM09	CSPLG_POPTR	No assigned EC number	0.5921	1.0	0.9889	yes	no
C6SZ04	CSPL3_SOYBN	No assigned EC number	0.5549	0.9497	0.9444	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	179
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	1e-25
TIGR01569	154	TIGR01569, A_tha_TIGR01569, plant integral membran	8e-19

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score = 95.9 bits (239), Expect = 1e-25
 Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 3/150 (2%)

Query: 3   VQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGY 62
           ++  E  +R+ A +L L  A ++G + Q+K  F++ +K ++ +L A   LV   + AAGY
Sbjct: 4   LRLAELVLRLAAFVLALAAAVVMGTNKQTKPFFFIQKKASFSDLPAFRYLVVANAIAAGY 63

Query: 63  NLLQLGRSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKE 122
           +LLQL  SV+    L   K   + LAW+ ++LDQ++ Y+     SAA     LA +G   
Sbjct: 64  SLLQLVLSVY---LLSRKKPRTKGLAWLLFILDQVMAYLLLAAASAAAAIVYLARNGNSH 120

Query: 123 FQWMKWCNKFTRFCFQIGGALVSGYAACAL 152
             WMK CN+F RFC +   ++   + A  L
Sbjct: 121 ANWMKICNQFGRFCNRAAASVALSFLAFLL 150

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

>gnl|CDD|233471 TIGR01569, A_tha_TIGR01569, plant integral membrane protein TIGR01569

 Score = 78.2 bits (193), Expect = 8e-19
 Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 7/156 (4%)

Query: 11  RVWAALLLLLTACLVGLDTQSKYIF--YVDRKITYKELHALGALVYVASAAAGYNLLQLG 68
           RV A    L  A ++G + ++K +F   +  K  + +L A    V   + A GY+LL L 
Sbjct: 4   RVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLLSLV 63

Query: 69  RSVFVSRYLGNSKGSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKW 128
            S+F     G  K    +     + LD +++ +     SAA   + +   G KE  W+K 
Sbjct: 64  VSIF-----GLLKRRVFFKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKI 118

Query: 129 CNKFTRFCFQIGGALVSGYAACALMVLATSISAFNL 164
           C  F +FC +I G+L     A  L+VL + +SA +L
Sbjct: 119 CGVFGKFCDRIAGSLALSLFAVILLVLLSILSAISL 154

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized. Length = 154

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	179
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	100.0
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	100.0
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	98.6

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=100.00  E-value=1e-46  Score=295.01  Aligned_cols=152  Identities=28%  Similarity=0.417  Sum_probs=143.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccccceEEe--eeeeeeecchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCcc
Q 030313            8 AFVRVWAALLLLLTACLVGLDTQSKYIFY--VDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKGSYR   85 (179)
Q Consensus         8 l~LR~~a~~~sl~a~~vm~t~~q~~~~~~--~~~~~~f~~~~af~ylv~a~~i~~~Ysllql~~~~~~~l~~~~~~~~~~   85 (179)
                      ++||+++++++++|+++|+||+|+.+++.  +++++||+|+++|+|+|++|+|+++|+++|+++++ +++.+++..    
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~~~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~-~~~~~~~~~----   75 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSI-FGLLKRRVF----   75 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeecccceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcccch----
Confidence            46999999999999999999999999987  89999999999999999999999999999999998 666555532    


Q ss_pred             hhHhHHHhHhHHHHHHHHHhhhhHHHHHHHHhhcccchhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 030313           86 YLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATSISAFNL  164 (179)
Q Consensus        86 ~~~~~~f~~Dqv~ayLl~sa~sAA~~v~~l~~~G~~~~~W~~iC~~~~~FC~~~~~Si~~sf~A~~~~~~~s~iSa~~L  164 (179)
                      ...|++|.+||+++|+++||++||+++++++|+||+|.+|+|+|+++|+||||+++|++++|+|++++++++++|++++
T Consensus        76 ~~~~~~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~~~~FC~~~~~sl~~s~~a~v~~~llsv~Sa~~~  154 (154)
T TIGR01569        76 FKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAISL  154 (154)
T ss_pred             hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3589999999999999999999999999999999999999999999999999999999999999999999999999985

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=100.00  E-value=3.4e-41  Score=261.98  Aligned_cols=148  Identities=27%  Similarity=0.448  Sum_probs=139.7

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhccccceEEeeeeeeeecchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCC
Q 030313            2 DVQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSK   81 (179)
Q Consensus         2 ~~~~~~l~LR~~a~~~sl~a~~vm~t~~q~~~~~~~~~~~~f~~~~af~ylv~a~~i~~~Ysllql~~~~~~~l~~~~~~   81 (179)
                      +.+.++++||+++++++++|+++|++|+||.++.+.+.+++|+|+++|+|+|++|+|+++|+++|++.++ +.+.+|+ .
T Consensus         2 ~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~~~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~-~~~~~~~-~   79 (149)
T PF04535_consen    2 SLRIASLVLRLLAFVLSLAALAVMATNKQTVSVFSIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSI-YSLSRGK-L   79 (149)
T ss_pred             CchhhhHHHHHHHHHHHHHHHHHHHhcCCcceeeccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHccC-C
Confidence            5688999999999999999999999999999999999999999999999999999999999999999998 6776655 3


Q ss_pred             CCcchhHhHHHhHhHHHHHHHHHhhhhHHHHHHHHhhcccchhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q 030313           82 GSYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACAL  152 (179)
Q Consensus        82 ~~~~~~~~~~f~~Dqv~ayLl~sa~sAA~~v~~l~~~G~~~~~W~~iC~~~~~FC~~~~~Si~~sf~A~~~  152 (179)
                      ++ +...|++|++||+++|+++||++||+++++++++|+++.+|+++|+.+++||+|+++|++++|+|+++
T Consensus        80 ~~-~~~~~~~f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~~~~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   80 RS-KLLAWFLFILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQFGKFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             cc-cchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccchhhHHHHHHHHHHHHHHHHHC
Confidence            33 77899999999999999999999999999999999999999999999999999999999999999874

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=98.60  E-value=1.3e-06  Score=65.77  Aligned_cols=142  Identities=14%  Similarity=0.083  Sum_probs=101.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhccccceEEeeeeeeeecchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCC
Q 030313            3 VQKIEAFVRVWAALLLLLTACLVGLDTQSKYIFYVDRKITYKELHALGALVYVASAAAGYNLLQLGRSVFVSRYLGNSKG   82 (179)
Q Consensus         3 ~~~~~l~LR~~a~~~sl~a~~vm~t~~q~~~~~~~~~~~~f~~~~af~ylv~a~~i~~~Ysllql~~~~~~~l~~~~~~~   82 (179)
                      ++....+||+++++++++.+.+++....+...      ......++..|.+.+.++...+++.-++... ..   .+..+
T Consensus         2 l~s~~~ilR~lq~~~~~i~~~l~~~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~---~~~~~   71 (144)
T PF01284_consen    2 LRSPSGILRILQLVFALIIFGLVASSIATGSQ------IYGGSPSACGFALFVAVLSFLYTLIFLLLYL-FS---LKYRP   71 (144)
T ss_pred             CccHhHHHHHHHHHHHHHHHHHHHHHHhcccc------ccCCCCcchhHHHHHHHHHHHHHHHHHHHHH-HH---Hhccc
Confidence            35678899999999999999999987743221      2455667889999999999999998888765 22   11111


Q ss_pred             CcchhHhHHHhHhHHHHHHHHHhhhhHHHHHHHHhhcccchhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 030313           83 SYRYLAWVSYLLDQMVVYIAFGTNSAAVEHSVLALSGMKEFQWMKWCNKFTRFCFQIGGALVSGYAACALMVLATS  158 (179)
Q Consensus        83 ~~~~~~~~~f~~Dqv~ayLl~sa~sAA~~v~~l~~~G~~~~~W~~iC~~~~~FC~~~~~Si~~sf~A~~~~~~~s~  158 (179)
                      + +...+.++..|.+++.+-+.+..+-+.-....+.+++   +++.+...++-|+...++.++++++++.+..+.+
T Consensus        72 ~-~~~~~~~~~~~~v~~il~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~Aa~~f~~~~~~l~~~s~~  143 (144)
T PF01284_consen   72 R-IPWPLVEFIFDAVFAILWLAAFIALAAYLSDHSCSNT---GNDYSYSGCSRCGAWKAAAAFGFLNWLLFIVSAV  143 (144)
T ss_pred             c-cccchhHHHHHHHHHHHHHHHHHHHHHHhcCcccccC---CCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            2 4456889999999999999866655532211111111   2233445567899999999999999999887764

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00