Citrus Sinensis ID: 030320

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVAMKMEGADSFSRSSI
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEccccEEccccHHHHHHHHcccccEEEEEEEEccccccEEEEEEEEEEcccccEEEEEEEEEcccccEEEEEEEcccccccEEEcccEEEEEEccccccccccccccccccEEEEEEEcccEEEEEEcccEEEEEEEEccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEcccccccccEEEEccccccccccHHHHHHHccccccEEEEEEEcccccccEEEEEEEEEEccccccEEEEEEEEcccccEEEEEEEcccccccccccccEEEEEEcccccccccccccccEEEEEEEEEcccccEEEEEcccEEEEEEEEEcccccccccccccccccc
Coil and Loop (DISEMBL)
masyaplfvnandrwwtpdaivfnsaqlygtpsywvqqffressgatlLNATLLTNSSSSIVASAiswedsenAKSFLRIKVVNLRSNSVNLKVsvdglgpnsiklsgstktqltssnlkdensftepnkvvpsltLLENAAKDmdvvispysftsFDLLRESVAMKMegadsfsrssi
Flexible Loop (DISEMBL)
MASYAPLFvnandrwwtPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKVVNLRSNSVNlkvsvdglgpnsiklsgstktqltssnlkdensftepnkvvPSLTLLENAAKDMDVVISPYSFTSFDLLRESVAMKmegadsfsrssi
Low Complexity Region (SEG)
MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFREssgatllnatlltnssssivasaisWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVAMKMEGADSFSRSSI
Disordered region (IsUnstruct)
***YAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLN*************************SFLRIKVVNLRSNSVNLKVSV*************************************SLTLLENAAKDMDVVISPYSFTSFDLLR******************
Disordered Region (DISOPRED)
MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRES****************
Disordered Region (DISEMBL)
MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLS*****************FTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVAMKME**********
Disordered Region (DISPRO)
*ASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESV***************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVAMKMEGADSFSRSSI
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	179	2.2.26 [Sep-21-2011]
Q9SG80	678	Alpha-L-arabinofuranosida	yes	no	0.966	0.255	0.630	3e-56
Q8VZR2	674	Alpha-L-arabinofuranosida	no	no	0.960	0.255	0.566	1e-45
Q2U790	629	Probable alpha-N-arabinof	yes	no	0.743	0.211	0.292	4e-05
B8NKA3	629	Probable alpha-N-arabinof	N/A	no	0.743	0.211	0.286	0.0001
Q0CTV2	628	Probable alpha-N-arabinof	N/A	no	0.513	0.146	0.316	0.0002

>sp|Q9SG80|ASD1_ARATH Alpha-L-arabinofuranosidase 1 OS=Arabidopsis thaliana GN=ASD1 PE=1 SV=1

 Score =  217 bits (553), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 111/176 (63%), Positives = 139/176 (78%), Gaps = 3/176 (1%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           MASYAPLFVN NDR W PDAIVFNS+ LYGTPSYWVQ+FF ESSGATLL +TL  NS+S 
Sbjct: 500 MASYAPLFVNTNDRRWNPDAIVFNSSHLYGTPSYWVQRFFAESSGATLLTSTLKGNSTS- 558

Query: 61  IVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLK 120
           +VASAISW++  N K ++RIK VN  +NS N++V V GL PN +++SGS KT LTS+N+ 
Sbjct: 559 LVASAISWKN--NGKDYIRIKAVNFGANSENMQVLVTGLDPNVMRVSGSKKTVLTSTNVM 616

Query: 121 DENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVAMKMEGADSFSR 176
           DENSF++P KVVP  +LLE A +DM VV+ P+SF+SFDLL+ES  ++M  +DS S 
Sbjct: 617 DENSFSQPEKVVPHESLLELAEEDMTVVLPPHSFSSFDLLKESAKIRMPISDSSSH 672

May be involved in the coordinated dissolution of the cell wall matrix during abscission and in the secondary cell wall formation in xylem vessels. Prefers arabinoxylan, but may also use pectic arabinans as substrates.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: -

>sp|Q8VZR2|ASD2_ARATH Alpha-L-arabinofuranosidase 2 OS=Arabidopsis thaliana GN=ASD2 PE=2 SV=1

 Score =  182 bits (461), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 128/180 (71%), Gaps = 8/180 (4%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           M SYAPLFVN NDR W PDAIVFNS+ LYGTPSYWVQ FF ESSGATLLN+T L   +SS
Sbjct: 499 MVSYAPLFVNTNDRRWIPDAIVFNSSHLYGTPSYWVQHFFTESSGATLLNST-LKGKTSS 557

Query: 61  IVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLK 120
           + ASAIS++   N K +++IK VN    SVNLKV+V GL     K  GS K  LTS+++ 
Sbjct: 558 VEASAISFQ--TNGKDYIQIKAVNFGEQSVNLKVAVTGL---MAKFYGSKKKVLTSASVM 612

Query: 121 DENSFTEPNKVVPSLTLLE-NAAKDMDVVISPYSFTSFDLLRESV-AMKMEGADSFSRSS 178
           DENSF+ PN +VP  +LLE    +D+  V+ P+SF+SFDLL ES   +KM  +DS+ ++S
Sbjct: 613 DENSFSNPNMIVPQESLLEMTEQEDLMFVLPPHSFSSFDLLTESENVIKMPISDSYKKTS 672

May be involved in the coordinated dissolution of the cell wall matrix during abscission and in the secondary cell wall formation in xylem vessels.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q2U790|ABFA_ASPOR Probable alpha-N-arabinofuranosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=abfA PE=3 SV=2

 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 24/157 (15%)

Query: 1   MASYAPLFVNANDRWWTPDAIVF--NSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSS 58
           MA+YAPL    N   WTP+ I F  N + +  T SY+VQQ F  + G T+ N T      
Sbjct: 483 MAAYAPLLQLVNSTQWTPNLIAFTQNPSTVIETTSYYVQQMFSVNRGDTIHNVT------ 536

Query: 59  SSIVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSN 118
           S      + W  S +A     +K+ N  +++  + V++ G        +G   T L  S+
Sbjct: 537 SDSAFGPVYWVAS-SADDKYYVKLANYGADTQEITVTISG-------KTGGKLTVLADSD 588

Query: 119 LKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFT 155
            K  NS T+        TL+  +  DM      ++FT
Sbjct: 589 PKAFNSDTQ--------TLVTPSESDMKATNGKFTFT 617

Alpha-N-arabinofuranosidase involved in the degradation of arabinoxylan, a major component of plant hemicellulose. Acts only on small linear 1,5-alpha-linked L-arabinofuranosyl oligosaccharides.

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 5

>sp|B8NKA3|ABFA_ASPFN Probable alpha-N-arabinofuranosidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=abfA PE=3 SV=2

 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 24/157 (15%)

Query: 1   MASYAPLFVNANDRWWTPDAIVF--NSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSS 58
           MA+YAPL    N   WTP+ I F  N + +  T SY+VQQ F  + G T+ N T      
Sbjct: 483 MAAYAPLLQLVNSTQWTPNLIAFTQNPSTVIETTSYYVQQMFSVNRGDTIHNVT------ 536

Query: 59  SSIVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSN 118
           S      + W  S +A     +K+ N  +++  + V++ G        +G   T L  S+
Sbjct: 537 SDSAFGPVYWVAS-SADDKYYVKLANYGADTQEITVTISG-------KTGGKLTVLADSD 588

Query: 119 LKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFT 155
            K  NS T+        TL+  +  D+      ++FT
Sbjct: 589 PKAFNSDTQ--------TLVTPSESDVKATNGKFTFT 617

Alpha-N-arabinofuranosidase involved in the degradation of arabinoxylan, a major component of plant hemicellulose. Acts only on small linear 1,5-alpha-linked L-arabinofuranosyl oligosaccharides.

Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) (taxid: 332952)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 5

>sp|Q0CTV2|ABFA_ASPTN Probable alpha-N-arabinofuranosidase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=abfA PE=3 SV=1

 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 9/101 (8%)

Query: 1   MASYAPLFVNANDRWWTPDAIVF--NSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSS 58
           MA+YAPL    N   WTPD I F  N   +  + SY+VQQ F  + G T+   T      
Sbjct: 482 MAAYAPLLQLVNSTQWTPDLISFTQNPNMVIDSTSYYVQQMFSVNRGDTIKEVT------ 535

Query: 59  SSIVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGL 99
           S      + W  S +  S+  +K+ N  +++  + VS+ G+
Sbjct: 536 SDSAFGPVYWVASSSGSSYY-VKLANYGADTQEVSVSIPGM 575

Alpha-N-arabinofuranosidase involved in the degradation of arabinoxylan, a major component of plant hemicellulose. Acts only on small linear 1,5-alpha-linked L-arabinofuranosyl oligosaccharides.

Aspergillus terreus (strain NIH 2624 / FGSC A1156) (taxid: 341663)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
255565362	678	Alpha-N-arabinofuranosidase 1 precursor,	1.0	0.264	0.670	3e-64
356504623	676	PREDICTED: alpha-L-arabinofuranosidase 1	1.0	0.264	0.659	4e-61
157313302	677	alpha-L-arabinofuranosidase protein [Pru	1.0	0.264	0.675	2e-60
119507455	675	alpha-Arabinosidase1 [Pyrus communis]	1.0	0.265	0.683	2e-60
33151175	675	alpha-L-arabinofuranosidase [Malus x dom	1.0	0.265	0.683	2e-60
116739148	677	alpha-L-arabinofuranosidase [Prunus pers	1.0	0.264	0.664	5e-60
224086707	670	predicted protein [Populus trichocarpa]	0.988	0.264	0.687	5e-60
356571858	676	PREDICTED: alpha-L-arabinofuranosidase 1	1.0	0.264	0.659	6e-60
222093461	368	alpha-L-arabinofuranosidase [Prunus sali	1.0	0.486	0.670	1e-59
157072586	665	alpha-L-arabinofuranosidase [Fragaria x	0.955	0.257	0.668	1e-58

>gi|255565362|ref|XP_002523672.1| Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] gi|223537072|gb|EEF38707.1| Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis]

 Score =  249 bits (636), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 120/179 (67%), Positives = 155/179 (86%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           MASYAPLFV++N+R W PDAIVFNS+QLYGTPSYWVQ+FF +SSGATL+N TL TNSS+S
Sbjct: 500 MASYAPLFVHSNNRRWNPDAIVFNSSQLYGTPSYWVQRFFMDSSGATLINTTLQTNSSTS 559

Query: 61  IVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLK 120
           ++ASAI W++S ++K++L+IKVVN  S++VNLK+S+DGLG NSI+LSGSTK  LTS+N+ 
Sbjct: 560 LIASAIIWQNSVDSKNYLKIKVVNFGSSTVNLKISIDGLGLNSIQLSGSTKMLLTSANVM 619

Query: 121 DENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVAMKMEGADSFSRSSI 179
           DENSF +P KV+P+L++L++A KDMDVV+ PYS TS+DLL ES  +K+ G DS SRSSI
Sbjct: 620 DENSFNDPKKVLPTLSMLDHAGKDMDVVLPPYSLTSYDLLTESSNIKITGTDSLSRSSI 678

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504623|ref|XP_003521095.1| PREDICTED: alpha-L-arabinofuranosidase 1-like [Glycine max]

 Score =  239 bits (610), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 118/179 (65%), Positives = 150/179 (83%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           MASYAPLFVNANDR W PDAIVFNS QLYGTPSYWVQ FF ESSGATLL+ +L   SS+S
Sbjct: 498 MASYAPLFVNANDRRWNPDAIVFNSFQLYGTPSYWVQVFFSESSGATLLSTSLQAPSSNS 557

Query: 61  IVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLK 120
           +VASAI++++S + K+++RIKVVN  + +VNLK+S+DGL PNS++LSGSTKT LTS+N+ 
Sbjct: 558 LVASAITFQNSVDKKNYIRIKVVNFGTTAVNLKISLDGLEPNSLQLSGSTKTVLTSANVM 617

Query: 121 DENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVAMKMEGADSFSRSSI 179
           DENSF++P KVVP  +LL+N  KDM+V + P SFTSFDL+++S  +KM G+DS +RSSI
Sbjct: 618 DENSFSQPKKVVPIQSLLQNVGKDMNVTVPPRSFTSFDLVKQSSTLKMAGSDSSTRSSI 676

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|157313302|gb|ABV32544.1| alpha-L-arabinofuranosidase protein [Prunus persica]

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/182 (67%), Positives = 143/182 (78%), Gaps = 3/182 (1%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           MASYAPLFVNAN+R W PDAIVFNS+ LYGTPSYWVQ  F ESSGAT+ NATL TN S+S
Sbjct: 496 MASYAPLFVNANNRRWNPDAIVFNSSHLYGTPSYWVQCLFNESSGATIFNATLQTNLSTS 555

Query: 61  IVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLK 120
           ++ASAISW++SEN  S+LRIK+VN  +N VNLK+ VDGL PNSI LS STKT LTS+NL 
Sbjct: 556 LLASAISWKNSENGNSYLRIKIVNFGTNIVNLKIVVDGLEPNSINLSESTKTVLTSTNLM 615

Query: 121 DENSFTEPNKVVPSLTLLENA---AKDMDVVISPYSFTSFDLLRESVAMKMEGADSFSRS 177
           DENSF EP KV+P+  LLE A    +DM+V ISP+SFTS D L ES  ++  GADS S S
Sbjct: 616 DENSFNEPKKVIPNRILLEKAGEDGEDMEVAISPHSFTSIDFLIESSFIRTTGADSVSVS 675

Query: 178 SI 179
           SI
Sbjct: 676 SI 677

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|119507455|dbj|BAF42035.1| alpha-Arabinosidase1 [Pyrus communis]

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/180 (68%), Positives = 147/180 (81%), Gaps = 1/180 (0%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           MASYAPLFVN +DR W PDAIVF+S+QLYGTPSYWVQ  F ESSGATL N+TL  NSS+S
Sbjct: 496 MASYAPLFVNTHDRRWNPDAIVFDSSQLYGTPSYWVQCLFNESSGATLYNSTLQMNSSTS 555

Query: 61  IVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLK 120
           ++ASAISW++SEN  ++LRIKVVNL +N+VNL+V VDGL PNSI LSGSTKT LTS+N  
Sbjct: 556 LLASAISWQNSENENTYLRIKVVNLGTNTVNLQVFVDGLEPNSISLSGSTKTVLTSNNQM 615

Query: 121 DENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESV-AMKMEGADSFSRSSI 179
           DENSF +P KV+P  +LLE+A ++M+VVISP SFTS DLL ES   ++  GADS S SSI
Sbjct: 616 DENSFNDPTKVIPKQSLLESAGEEMEVVISPRSFTSIDLLMESSDIIRTTGADSVSVSSI 675

Source: Pyrus communis

Species: Pyrus communis

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|33151175|gb|AAP97437.1| alpha-L-arabinofuranosidase [Malus x domestica]

 Score =  236 bits (603), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/180 (68%), Positives = 146/180 (81%), Gaps = 1/180 (0%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           MASYAPLFVN +DR W PDAIVF+S+QLYGTPSYWVQ  F ESSGATL N+TL  NSS+S
Sbjct: 496 MASYAPLFVNTHDRRWNPDAIVFDSSQLYGTPSYWVQCLFNESSGATLYNSTLQMNSSTS 555

Query: 61  IVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLK 120
           ++ASAISW++SEN  ++LRIKVVNL + +VNLKV VDGL PNS+ LSGSTKT LTS+N  
Sbjct: 556 LLASAISWQNSENENTYLRIKVVNLGTYTVNLKVFVDGLEPNSVSLSGSTKTVLTSNNQM 615

Query: 121 DENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESV-AMKMEGADSFSRSSI 179
           DENSF EP KV+P  +LLE+A ++M+VVISP SFTS DLL ES   ++  GADS S SSI
Sbjct: 616 DENSFNEPKKVIPKRSLLESAGEEMEVVISPRSFTSIDLLMESSDVIRTTGADSVSVSSI 675

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116739148|gb|ABF22680.3| alpha-L-arabinofuranosidase [Prunus persica]

 Score =  235 bits (600), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 121/182 (66%), Positives = 143/182 (78%), Gaps = 3/182 (1%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           MA YAPLFVNAN+R W PDAIVFNS+ LYGTPSYWVQ+ F ESSGAT+ NATL TN S+S
Sbjct: 496 MACYAPLFVNANNRRWNPDAIVFNSSHLYGTPSYWVQRLFNESSGATIFNATLQTNLSTS 555

Query: 61  IVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLK 120
           ++ASAISW++SEN  S+LRIK+VN  +N VNLK++VDGL PNSI LS STKT LTS+NL 
Sbjct: 556 LLASAISWKNSENGNSYLRIKIVNFGTNIVNLKIAVDGLEPNSINLSESTKTVLTSTNLM 615

Query: 121 DENSFTEPNKVVPSLTLLENA---AKDMDVVISPYSFTSFDLLRESVAMKMEGADSFSRS 177
           DENSF EP KV+P+  LLE A    +DM+V ISP SFT+ D L ES  ++  GADS S S
Sbjct: 616 DENSFNEPKKVIPNRILLEKAGEDGEDMEVAISPRSFTTIDFLIESSFIRTTGADSVSVS 675

Query: 178 SI 179
           SI
Sbjct: 676 SI 677

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086707|ref|XP_002307940.1| predicted protein [Populus trichocarpa] gi|222853916|gb|EEE91463.1| predicted protein [Populus trichocarpa]

 Score =  235 bits (600), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 123/179 (68%), Positives = 148/179 (82%), Gaps = 2/179 (1%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           MASYAPLFVN NDR W PDAIVFNS+  YGTPSYWV +FFRESSGATLL+A L TNSSS 
Sbjct: 494 MASYAPLFVNDNDRRWNPDAIVFNSSMHYGTPSYWVLKFFRESSGATLLDAKLQTNSSS- 552

Query: 61  IVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLK 120
           +VASAI+W +S + +++L+IK+VN  +  V+LKVSVDGLG NS +LSGSTKT LTSSN+ 
Sbjct: 553 LVASAITWTNSVDGETYLKIKIVNFGNRHVSLKVSVDGLGLNS-QLSGSTKTVLTSSNVM 611

Query: 121 DENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVAMKMEGADSFSRSSI 179
           DENSFT+PNKVVP L+LLENA KDM+++I+PYS TS DLL ES  ++M   DS +RSSI
Sbjct: 612 DENSFTDPNKVVPDLSLLENADKDMNIIIAPYSLTSLDLLTESNNIRMPQTDSSARSSI 670

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356571858|ref|XP_003554088.1| PREDICTED: alpha-L-arabinofuranosidase 1-like [Glycine max]

 Score =  235 bits (599), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 118/179 (65%), Positives = 149/179 (83%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           MASYAPLFVNANDR W PDAIVFNS QLYGTPSYWVQ FF ESSGATLL+ +L   SS+S
Sbjct: 498 MASYAPLFVNANDRRWNPDAIVFNSFQLYGTPSYWVQLFFSESSGATLLSTSLQAPSSNS 557

Query: 61  IVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLK 120
           +VASAI++++S + K+++RIKVVN  + +VNLK+S+DGL PNS++LSGSTKT LTS+N+ 
Sbjct: 558 LVASAITFQNSVDKKNYIRIKVVNFGTTAVNLKISLDGLEPNSLQLSGSTKTVLTSANVM 617

Query: 121 DENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVAMKMEGADSFSRSSI 179
           DENSF++P KVVP  +LL+N  KDM+V + P SFTSFDLL++S  +KM G+DS + SSI
Sbjct: 618 DENSFSQPKKVVPIQSLLQNVEKDMNVTVPPRSFTSFDLLKQSSNLKMAGSDSSTWSSI 676

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222093461|gb|ACM43507.1| alpha-L-arabinofuranosidase [Prunus salicina]

 Score =  234 bits (596), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 122/182 (67%), Positives = 141/182 (77%), Gaps = 3/182 (1%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           MASYAPLFVNAN+R W PDAIVFNS+ LYGTPSYWVQ  F ESSGAT+ NATL TN S+S
Sbjct: 187 MASYAPLFVNANNRRWNPDAIVFNSSHLYGTPSYWVQCLFNESSGATIFNATLQTNLSTS 246

Query: 61  IVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLK 120
           ++ASAISW++SEN  S+LRIK+VN  +N VNLK+ VDGL  NSI LS STKT LTS+NL 
Sbjct: 247 LLASAISWKNSENENSYLRIKIVNFGTNIVNLKIVVDGLEQNSINLSESTKTVLTSTNLM 306

Query: 121 DENSFTEPNKVVPSLTLLENA---AKDMDVVISPYSFTSFDLLRESVAMKMEGADSFSRS 177
           DENSF EP KV+P+  LLE A    +DM V ISP+SFTS D L ES  ++  GADS S S
Sbjct: 307 DENSFNEPKKVIPNRILLEKAGEDGEDMQVAISPHSFTSIDFLIESSFIRTTGADSVSVS 366

Query: 178 SI 179
           SI
Sbjct: 367 SI 368

Source: Prunus salicina

Species: Prunus salicina

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|157072586|gb|ABV08816.1| alpha-L-arabinofuranosidase [Fragaria x ananassa]

 Score =  230 bits (587), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 115/172 (66%), Positives = 140/172 (81%), Gaps = 1/172 (0%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           MASYAPLFVNAN++ W+PDAIVFNS+QLYGTPSYWVQ FF ESSGAT+ NATL T SS+S
Sbjct: 488 MASYAPLFVNANNKRWSPDAIVFNSSQLYGTPSYWVQCFFSESSGATIFNATLQTESSTS 547

Query: 61  IVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLK 120
           ++ASAI W+ SE+ K++LRIK+VN  SN VNL++ VDGL PNS+ +SGSTKT LTS N+ 
Sbjct: 548 LLASAILWKSSEDQKTYLRIKIVNFGSNIVNLRIRVDGLEPNSVSMSGSTKTVLTSKNVM 607

Query: 121 DENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVAMKMEGAD 172
           DENSF EP KV+P+L LLENA ++MDV +S +SFTS DLL E   +   GAD
Sbjct: 608 DENSFDEPKKVIPNLGLLENAGEEMDVGLSAHSFTSIDLLVEPSHLTT-GAD 658

Source: Fragaria x ananassa

Species: Fragaria x ananassa

Genus: Fragaria

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
TAIR|locus:2103172	678	ASD1 "alpha-L-arabinofuranosid	0.960	0.253	0.531	1.7e-43
TAIR|locus:2180652	674	ASD2 "alpha-L-arabinofuranosid	0.960	0.255	0.472	6.9e-35

TAIR|locus:2103172 ASD1 "alpha-L-arabinofuranosidase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 461 (167.3 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 93/175 (53%), Positives = 118/175 (67%)

Query:     1 MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFREXXXXXXXXXXXXXXXXXX 60
             MASYAPLFVN NDR W PDAIVFNS+ LYGTPSYWVQ+FF E                  
Sbjct:   500 MASYAPLFVNTNDRRWNPDAIVFNSSHLYGTPSYWVQRFFAESSGATLLTSTLKGNSTSL 559

Query:    61 XXXXXXXWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLK 120
                    W++  N K ++RIK VN  +NS N++V V GL PN +++SGS KT LTS+N+ 
Sbjct:   560 VASAIS-WKN--NGKDYIRIKAVNFGANSENMQVLVTGLDPNVMRVSGSKKTVLTSTNVM 616

Query:   121 DENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVAMKMEGADSFS 175
             DENSF++P KVVP  +LLE A +DM VV+ P+SF+SFDLL+ES  ++M  +DS S
Sbjct:   617 DENSFSQPEKVVPHESLLELAEEDMTVVLPPHSFSSFDLLKESAKIRMPISDSSS 671

GO:0005576 "extracellular region" evidence=ISM

GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS

GO:0046373 "L-arabinose metabolic process" evidence=IEA

GO:0046556 "alpha-N-arabinofuranosidase activity" evidence=IEA;IDA

GO:0009044 "xylan 1,4-beta-xylosidase activity" evidence=IDA

GO:0045493 "xylan catabolic process" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2180652 ASD2 "alpha-L-arabinofuranosidase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 384 (140.2 bits), Expect = 6.9e-35, P = 6.9e-35
 Identities = 85/180 (47%), Positives = 106/180 (58%)

Query:     1 MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFREXXXXXXXXXXXXXXXXXX 60
             M SYAPLFVN NDR W PDAIVFNS+ LYGTPSYWVQ FF E                  
Sbjct:   499 MVSYAPLFVNTNDRRWIPDAIVFNSSHLYGTPSYWVQHFFTESSGATLLNSTLKGKTSSV 558

Query:    61 XXXXXXXWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLK 120
                         N K +++IK VN    SVNLKV+V GL     K  GS K  LTS+++ 
Sbjct:   559 EASAISF---QTNGKDYIQIKAVNFGEQSVNLKVAVTGL---MAKFYGSKKKVLTSASVM 612

Query:   121 DENSFTEPNKVVPSLTLLE-NAAKDMDVVISPYSFTSFDLLRESV-AMKMEGADSFSRSS 178
             DENSF+ PN +VP  +LLE    +D+  V+ P+SF+SFDLL ES   +KM  +DS+ ++S
Sbjct:   613 DENSFSNPNMIVPQESLLEMTEQEDLMFVLPPHSFSSFDLLTESENVIKMPISDSYKKTS 672


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.127   0.365    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      179       154   0.00088  105 3  11 23  0.39    32
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  554 (59 KB)
  Total size of DFA:  132 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.08u 0.22s 14.30t   Elapsed:  00:00:01
  Total cpu time:  14.09u 0.22s 14.31t   Elapsed:  00:00:01
  Start:  Fri May 10 19:30:19 2013   End:  Fri May 10 19:30:20 2013

GO:0005576 "extracellular region" evidence=ISM

GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS

GO:0046373 "L-arabinose metabolic process" evidence=IEA

GO:0046556 "alpha-N-arabinofuranosidase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.2.1.55	LOW CONFIDENCE prediction!
3rd Layer	3.2.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	179
smart00813	189	smart00813, Alpha-L-AF_C, Alpha-L-arabinofuranosid	1e-37
pfam06964	192	pfam06964, Alpha-L-AF_C, Alpha-L-arabinofuranosida	5e-32
COG3534	501	COG3534, AbfA, Alpha-L-arabinofuranosidase [Carboh	3e-06

>gnl|CDD|214830 smart00813, Alpha-L-AF_C, Alpha-L-arabinofuranosidase C-terminus

 Score =  127 bits (322), Expect = 1e-37
 Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 15/158 (9%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTN--SS 58
           MASYA L    N     PD + FN  Q + T +Y+V Q F +  G T+L  T+ +     
Sbjct: 42  MASYAQLVNVIN-----PDMLTFNGGQAWRTTTYYVFQLFSKHQGGTVLPVTISSPTYDG 96

Query: 59  SSIVASAISWEDSENA-KSFLRIKVVNLRSN-SVNLKVSVDGLGPNSIKLSGSTKTQLTS 116
                 A+    S++     L +KVVN     +V + +S+ GL     K   +  T LTS
Sbjct: 97  EDSDVPALDASASKDEDGGSLTVKVVNRSPEEAVTVTISLRGL-----KAKSAEGTVLTS 151

Query: 117 SNLKDENSFTEPNKVVPSLTLLENAAKD-MDVVISPYS 153
            +L   N+F +PNKVVP  + L       + V + P+S
Sbjct: 152 PDLNAANTFEDPNKVVPVTSTLAAVEGGTLTVTLPPHS 189

This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. Length = 189

>gnl|CDD|219243 pfam06964, Alpha-L-AF_C, Alpha-L-arabinofuranosidase C-terminus

 Score =  113 bits (285), Expect = 5e-32
 Identities = 50/162 (30%), Positives = 72/162 (44%), Gaps = 23/162 (14%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNS--- 57
           MA+YA L             I FN  Q + TP+Y+V Q F +  G T+L  T+ + +   
Sbjct: 45  MANYAQLVNVIAP------LITFNGGQAWLTPTYYVFQMFSKHQGGTVLPVTVSSPTYVT 98

Query: 58  ----SSSIVASAISWEDSENAKSFLRIKVVNLRSN-SVNLKVSVDGLGPNSIKLSGSTKT 112
                  + ASA   ED       L IKVVN     +V ++V + GL       S +  T
Sbjct: 99  DGSDVPPLDASASLDEDGGE----LIIKVVNRSLTEAVTVEVDLPGLSA----GSSAELT 150

Query: 113 QLTSSNLKDENSFTEPNKVVP-SLTLLENAAKDMDVVISPYS 153
            LT  +L  EN+F  P KVVP   + +      + V + P+S
Sbjct: 151 VLTGDDLNAENTFENPEKVVPVPSSDVNAEGGTLTVTLPPHS 192

This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. Length = 192

>gnl|CDD|226064 COG3534, AbfA, Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 12/130 (9%)

Query: 31  TPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWED-----SENAKSFLRIKVVNL 85
           TP Y+  Q        T L   + + +    +A  + + D      E     L I VVN 
Sbjct: 368 TPIYYPFQMASVHGRGTALKVAVDSPTYDCELAEDVPYLDASASYDEEGGE-LTIFVVNR 426

Query: 86  R-SNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKD 144
              +++ L +S++GL   +          LT  +L   N+F  P  VVP        +K+
Sbjct: 427 ALEDALKLNISLNGLK-KAKSAEHQV---LTGDDLNATNTFDAPENVVPVPGKGATVSKN 482

Query: 145 -MDVVISPYS 153
            + + + P S
Sbjct: 483 ELTLDLPPLS 492

Length = 501

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	179
PF06964	177	Alpha-L-AF_C: Alpha-L-arabinofuranosidase C-termin	100.0
smart00813	189	Alpha-L-AF_C Alpha-L-arabinofuranosidase C-terminu	100.0
COG3534	501	AbfA Alpha-L-arabinofuranosidase [Carbohydrate tra	99.92
PF02055	496	Glyco_hydro_30: O-Glycosyl hydrolase family 30; In	96.23
PF02806	95	Alpha-amylase_C: Alpha amylase, C-terminal all-bet	92.75
PF14509	103	GH97_C: Glycosyl-hydrolase 97 C-terminal, oligomer	86.23

>PF06964 Alpha-L-AF_C: Alpha-L-arabinofuranosidase C-terminus; InterPro: IPR010720 This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (3

Probab=100.00  E-value=4.7e-38  Score=246.82  Aligned_cols=136  Identities=38%  Similarity=0.655  Sum_probs=117.4

Q ss_pred             CceecceeecCCCCCCCccEEEEcCCceecCcchhhhhhhcccCCCeEEEEEEecCCCCceEEEEEEeccCCCceeeEEE
Q 030320            1 MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSFLRI   80 (179)
Q Consensus         1 ma~yAPl~~~~~~~qW~p~lI~~d~~~~~~tp~Yyv~~lfs~~~g~~~l~~~~~~~~~~~v~~sA~~~~~t~~~~~~l~v   80 (179)
                      ||||||||++.+..||+|+||+||++++|+||+||||+||+.|.|+.+|         ++|+++|++|+++++    ++|
T Consensus        42 ma~~A~l~~~~~~~~w~~~li~~~~~~~~~tpsY~v~~lf~~~~g~~~l---------~~l~~~As~d~~~~~----l~v  108 (177)
T PF06964_consen   42 MACYAPLVNNIGDTQWTPDLITFDGDQVFGTPSYYVQKLFSNHRGDTVL---------PPLDVSASRDEDGGE----LYV  108 (177)
T ss_dssp             EEEEE-SBSTTS------SEEEETTSEEEESHHHHHHHHHHHCTTSEEE---------ESEEEEEEEETTTTE----EEE
T ss_pred             EEccchhhccccccccccceEEcCCCCEEECchHHHHHHHHhcCCCeEe---------ccEEEEEEEECCCCE----EEE
Confidence            8999999999999999999999999999999999999999999999999         579999999888764    999


Q ss_pred             EEEeCCCCcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCce
Q 030320           81 KVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYS  153 (179)
Q Consensus        81 k~VN~~~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S  153 (179)
                      |+||+++++++++|+|+|+...    ..+++++|+|+++.++|++++|++|.|++..+...++.|+++|||+|
T Consensus       109 ~vVN~~~~~~~v~l~l~g~~~~----~~a~~~~Ltg~~~~a~Nt~~~p~~V~p~~~~~~~~~~~~~~~lp~~S  177 (177)
T PF06964_consen  109 KVVNRSSEPQTVTLNLQGFSPA----ATATVTTLTGDDPDAENTFENPENVVPVTSTVSAEGGTFTYTLPPYS  177 (177)
T ss_dssp             EEEE-SSSBEEEEEEETTSTS-----EEEEEEEEETSSTT-B-CSSSTTSSEEEEEEEEEETTEEEEEE-SSE
T ss_pred             EEEECCCCCEEEEEEEcCCCCC----ceEEEEEEECCCcccccCCCCCCEEEEEEeeEEecCCEEEEEeCCCC
Confidence            9999998899999999998764    68999999999999999999999999999888888999999999998

2.1.55 from EC). This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides [].; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process; PDB: 3FW6_A 3II1_A 3S2C_K 1QW9_A 1PZ3_B 1PZ2_B 1QW8_A 3UG4_A 3UG3_A 4ATW_B ....

>smart00813 Alpha-L-AF_C Alpha-L-arabinofuranosidase C-terminus

Probab=100.00  E-value=5.5e-33  Score=220.48  Aligned_cols=139  Identities=37%  Similarity=0.544  Sum_probs=125.1

Q ss_pred             CceecceeecCCCCCCCccEEEEcCCceecCcchhhhhhhcccCCCeEEEEEEecCCC-------CceEEEEEEeccCCC
Q 030320            1 MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSS-------SSIVASAISWEDSEN   73 (179)
Q Consensus         1 ma~yAPl~~~~~~~qW~p~lI~~d~~~~~~tp~Yyv~~lfs~~~g~~~l~~~~~~~~~-------~~v~~sA~~~~~t~~   73 (179)
                      |||||||+++.+     |+||+||++++|+||+||||+||+.|+|+++|++.+.++.+       +.|+++|++|++++ 
T Consensus        42 ma~~A~lvn~~~-----p~~i~~~~~~~~~t~~Yyv~~lfs~~~g~~~l~~~v~~~~~~~~~~~~~~ld~sA~~~~~~~-  115 (189)
T smart00813       42 MASYAQLVNVIN-----PDMLTFNGGQAWRTTTYYVFQLFSKHQGGTVLPVTISSPTYDGEDSDVPALDASASKDEDGG-  115 (189)
T ss_pred             eehhhhhhcccc-----ceEEEeCCCCEEECCcCHHHHHhhhhCCceEEEEEeeCCccccCcccCCcEEEEEEEeCCCC-
Confidence            899999999764     89999999999999999999999999999999999988754       56999999987665 


Q ss_pred             ceeeEEEEEEeCCCC-cEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEE-EecCCeeEEEEcC
Q 030320           74 AKSFLRIKVVNLRSN-SVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLL-ENAAKDMDVVISP  151 (179)
Q Consensus        74 ~~~~l~vk~VN~~~~-~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~-~~~~~~~~~~lp~  151 (179)
                         +++||+||++.+ +++++|+|+|+..     ..+++++|+++++.+.||+++|++|+|++... ...++.|+++|||
T Consensus       116 ---~~~v~vvN~~~~~~~~~~l~l~g~~~-----~~~~~~~l~~~~~~a~Nt~~~p~~V~p~~~~~~~~~~~~~~~~lp~  187 (189)
T smart00813      116 ---SLTVKVVNRSPEEAVTVTISLRGLKA-----KSAEGTVLTSPDLNAANTFEDPNKVVPVTSTLAAVEGGTLTVTLPP  187 (189)
T ss_pred             ---EEEEEEEeCCCCcCEEEEEEecCCcc-----ceEEEEEEeCCCCccccCCCCCCeeeccccCCceeeCCEEEEEeCC
Confidence               499999999855 7999999999874     46789999999999999999999999999774 5677899999999


Q ss_pred             ce
Q 030320          152 YS  153 (179)
Q Consensus       152 ~S  153 (179)
                      +|
T Consensus       188 ~S  189 (189)
T smart00813      188 HS  189 (189)
T ss_pred             CC
Confidence            97

This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides.

>COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]

Probab=99.92  E-value=5.7e-25  Score=190.70  Aligned_cols=135  Identities=23%  Similarity=0.299  Sum_probs=118.4

Q ss_pred             EEEEcCCceecCcchhhhhhhcccCCCeEEEEEEecCCC--------CceEEEEEEeccCCCceeeEEEEEEeCCCC-cE
Q 030320           20 AIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSS--------SSIVASAISWEDSENAKSFLRIKVVNLRSN-SV   90 (179)
Q Consensus        20 lI~~d~~~~~~tp~Yyv~~lfs~~~g~~~l~~~~~~~~~--------~~v~~sA~~~~~t~~~~~~l~vk~VN~~~~-~~   90 (179)
                      ++...++++|+||+||||+|++.|.+++.|.+.+++++|        +.|++||++|+++++    |+||+||++.+ +.
T Consensus       357 i~~ekgg~~~~~~~y~~~~~~~~~g~~~~l~~~v~~p~yd~~~~~~vp~ld~sas~~~~~~~----l~i~vvN~~~~d~~  432 (501)
T COG3534         357 IMTEKGGPAWLTPIYYPFQMASVHGRGTALKVAVDSPTYDCELAEDVPYLDASASYDEEGGE----LTIFVVNRALEDAL  432 (501)
T ss_pred             eeecCCCcceeeehhhhhhheeeccCceEEEEEeccCceeccccccCcceeeeeeecccCCe----EEEEEEeccccccc
Confidence            344444556679999999999999999999999998874        259999999998774    99999999866 49


Q ss_pred             EEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeE-EEecCCeeEEEEcCceEEEEEEecc
Q 030320           91 NLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTL-LENAAKDMDVVISPYSFTSFDLLRE  162 (179)
Q Consensus        91 ~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~-~~~~~~~~~~~lp~~S~~vi~l~~~  162 (179)
                      +++|+|+|++..    ..+++++|+|++++|.|+|++|++|+|++.. ..++++.|+++|||+||.||||++.
T Consensus       433 ~~~i~l~G~~~a----~~~~~~~lt~~~~~a~Nt~d~p~~V~p~~~~~~~vs~~~l~~~~~~~S~~virl~~~  501 (501)
T COG3534         433 KLNISLNGLKKA----KSAEHQVLTGDDLNATNTFDAPENVVPVPGKGATVSKNELTLDLPPLSVSVIRLKLK  501 (501)
T ss_pred             cceEEecccccc----ceeeEEEEecCccccccCCCCCCceecccCCCccccCCceeEecCCceEEEEEEecC
Confidence            999999999863    6899999999999999999999999999877 4778889999999999999999863

>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3

Probab=96.23  E-value=0.06  Score=48.95  Aligned_cols=85  Identities=20%  Similarity=0.309  Sum_probs=54.9

Q ss_pred             ecCCCCCCCcc------EEEEcCCceecCcchhhhhhhccc--CCCeEEEEEEecCCCCceEEEEEEeccCCCceeeEEE
Q 030320            9 VNANDRWWTPD------AIVFNSAQLYGTPSYWVQQFFRES--SGATLLNATLLTNSSSSIVASAISWEDSENAKSFLRI   80 (179)
Q Consensus         9 ~~~~~~qW~p~------lI~~d~~~~~~tp~Yyv~~lfs~~--~g~~~l~~~~~~~~~~~v~~sA~~~~~t~~~~~~l~v   80 (179)
                      -..+|+.|..+      ++..+.+.++++|.||.+..|+..  .|.+.+.+..... -..|..+|-.+.++     .++|
T Consensus       382 D~~GGP~~~~n~~d~~iivd~~~~~~~~~p~yY~~gHfSKFV~PGa~RI~st~~~~-~~~l~~vAF~nPDG-----s~vv  455 (496)
T PF02055_consen  382 DENGGPNWVGNFCDAPIIVDSDTGEFYKQPEYYAMGHFSKFVRPGAVRIGSTSSSS-DSGLEAVAFLNPDG-----SIVV  455 (496)
T ss_dssp             ETTS---TT---B--SEEEEGGGTEEEE-HHHHHHHHHHTTS-TT-EEEEEEESSS-TTTEEEEEEEETTS-----EEEE
T ss_pred             CCCCCCcccCCCCCceeEEEcCCCeEEEcHHHHHHHHHhcccCCCCEEEEeeccCC-CCceeEEEEECCCC-----CEEE
Confidence            33456665432      333455889999999999999996  5888888866532 13688888776653     2677


Q ss_pred             EEEeCCCCcEEEEEEEccC
Q 030320           81 KVVNLRSNSVNLKVSVDGL   99 (179)
Q Consensus        81 k~VN~~~~~~~v~i~l~g~   99 (179)
                      -+.|++++++.++|.+++.
T Consensus       456 Vv~N~~~~~~~~~v~v~~~  474 (496)
T PF02055_consen  456 VVLNRGDSDQNFSVTVKDG  474 (496)
T ss_dssp             EEEE-SSS-EEEEEEEECT
T ss_pred             EEEcCCCCccceEEEEecC
Confidence            7899998888878887653

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A ....

>PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3

Probab=92.75  E-value=1.1  Score=30.90  Aligned_cols=20  Identities=25%  Similarity=0.433  Sum_probs=17.9

Q ss_pred             cCCeeEEEEcCceEEEEEEe
Q 030320          141 AAKDMDVVISPYSFTSFDLL  160 (179)
Q Consensus       141 ~~~~~~~~lp~~S~~vi~l~  160 (179)
                      .+++++++|||+|..|++++
T Consensus        75 ~~g~~~~~lp~~s~~vl~~~   94 (95)
T PF02806_consen   75 SNGRITVTLPPYSALVLKLK   94 (95)
T ss_dssp             TTSEEEEEESTTEEEEEEEE
T ss_pred             eCCEEEEEECCCEEEEEEEc
Confidence            46789999999999999986

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Alpha-amylase is classified as family 13 of the glycosyl hydrolases and is present in archaea, bacteria, plants and animals. Alpha-amylase is an essential enzyme in alpha-glucan metabolism, acting to catalyse the hydrolysis of alpha-1,4-glucosidic bonds of glycogen, starch and related polysaccharides. Although all alpha-amylases possess the same catalytic function, they can vary with respect to sequence. In general, they are composed of three domains: a TIM barrel containing the active site residues and chloride ion-binding site (domain A), a long loop region inserted between the third beta strand and the alpha-helix of domain A that contains calcium-binding site(s) (domain B), and a C-terminal beta-sheet domain that appears to show some variability in sequence and length between amylases (domain C) []. Amylases have at least one conserved calcium-binding site, as calcium is essential for the stability of the enzyme. The chloride-binding functions to activate the enzyme, which acts by a two-step mechanism involving a catalytic nucleophile base (usually an Asp) and a catalytic proton donor (usually a Glu) that are responsible for the formation of the beta-linked glycosyl-enzyme intermediate. This entry represents the all-beta domain that is found in several alpha-amylases, usually at the C terminus, and which forms a Greek key beta-barrel fold in these enzymes []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 1TCM_A 1CXL_A 1PJ9_A 1OT2_A 2DIJ_A 1CGV_A 1CXK_A 1PEZ_A 1CGX_A 2CXG_A ....

>PF14509 GH97_C: Glycosyl-hydrolase 97 C-terminal, oligomerisation; PDB: 3A24_A 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A

Probab=86.23  E-value=10  Score=27.15  Aligned_cols=75  Identities=11%  Similarity=0.083  Sum_probs=44.2

Q ss_pred             eEEEEEEeCCCCcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEE
Q 030320           77 FLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTS  156 (179)
Q Consensus        77 ~l~vk~VN~~~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~v  156 (179)
                      .-+|-.+|-.... .++|.|..+...    ..-++.++. +..++..  ++|..+..++..+. .++.+++.|.|+.=.+
T Consensus        28 ~Wyvg~in~~~~r-~i~l~L~FL~~g----~~y~a~i~~-D~~~a~~--~~~~~~~~~~~~v~-~~~~l~i~l~~~GG~v   98 (103)
T PF14509_consen   28 DWYVGGINGEDAR-TITLPLSFLDKG----KKYTATIYT-DGPDADY--TNPEAYKIETRKVT-SGDKLTITLAPGGGFV   98 (103)
T ss_dssp             EEEEEEEE-TT-E-EEEEEGCCS-TT------EEEEEEE-E-TTTCT--TCTT-EEEEEEEE--TT-EEEEEE-TT-EEE
T ss_pred             CEEEEEeeCCCce-EEEEECcccCCC----CcEEEEEEE-eCCcccc--cCCcceEEEEEEEC-CCCEEEEEEeCCCcEE
Confidence            4899999976444 489999877642    123445554 4443333  67777776665553 4678999999998888


Q ss_pred             EEEe
Q 030320          157 FDLL  160 (179)
Q Consensus       157 i~l~  160 (179)
                      ++|.
T Consensus        99 i~~~  102 (103)
T PF14509_consen   99 IRIT  102 (103)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	179
2vrq_A	496	Alpha-L-arabinofuranosidase; hydrolase, glycosidas	3e-26
3ug3_A	504	Alpha-L-arabinofuranosidase; TIM barrel, hydrolase	7e-25
2y2w_A	574	Arabinofuranosidase; hydrolase, arabinoxylan, glyc	2e-22
1qw9_A	502	Arabinosidase, alpha-L-arabinofuranosidase; hydrol	6e-21
2c7f_A	513	Alpha-L-arabinofuranosidase; glycosidase, xylan, a	1e-19

>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A Length = 496

 Score =  103 bits (256), Expect = 3e-26
 Identities = 36/162 (22%), Positives = 60/162 (37%), Gaps = 13/162 (8%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           MA+ A L             I+    ++  TP+Y V   F+    A LL+       +  
Sbjct: 342 MANIAQLV------NVLQSVILTEGERMLLTPTYHVFNMFKVHQDAELLDTWESVERTGP 395

Query: 61  I-VASAISWEDSENAKSFLRIKVVNLR-SNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSN 118
                 +S   S  A   + I + NL      ++ + + GL         +T T LTS  
Sbjct: 396 EGELPKVSVSASRAADGKIHISLCNLDFETGASVDIELRGLNGGVS----ATGTTLTSGR 451

Query: 119 LKDENSFTEPNKVVP-SLTLLENAAKDMDVVISPYSFTSFDL 159
           +   N+F EP +V P      +     ++  + P S T  +L
Sbjct: 452 IDGHNTFDEPERVKPAPFRDFKLEGGHLNASLPPMSVTVLEL 493

>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A Length = 504

 Score = 99.2 bits (246), Expect = 7e-25
 Identities = 33/178 (18%), Positives = 63/178 (35%), Gaps = 36/178 (20%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           +A+ A L           D ++        TP Y   +     SG  L+   + + + + 
Sbjct: 341 LANLAQLVNALGAIHTEKDGLIL-------TPVYKAFELIVNHSGEKLVKTHVESETYNI 393

Query: 61  ------------------IVASAISWEDSENAKSFLRIKVVNLR-SNSVNLKVSVDGLGP 101
                             + A+A   ED +     L I VVN R  +++ + + V+GLG 
Sbjct: 394 EGVMFINKMPFSVENAPFLDAAASISEDGKK----LFIAVVNYRKEDALKVPIRVEGLGQ 449

Query: 102 NSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDL 159
                   T   LT  ++   N+   PN V  + +       + +    P+S +  ++
Sbjct: 450 KKA-----TVYTLTGPDVNARNTMENPNVVDIT-SETITVDTEFEHTFKPFSCSVIEV 501

>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} Length = 574

 Score = 92.4 bits (228), Expect = 2e-22
 Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 14/167 (8%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
            AS A L VN          +       +   +++        +        + + +  +
Sbjct: 404 SASRAQL-VN-----VIAPIMAEEHGPAWRQTTFYPFAEAALHARGQAYAPAISSPTIHT 457

Query: 61  IVASAISWED-----SENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSI--KLSGSTKTQ 113
                +   D      E A++ L + V    +    L + + GL        L+      
Sbjct: 458 EAYGDVPAIDAVVTWDEQARTGLLLAVNRDANTPHTLTIDLSGLPGLPGLGTLALGKAQL 517

Query: 114 LTSSNLKDENSFTEPNKVVP-SLTLLENAAKDMDVVISPYSFTSFDL 159
           L   +    N+   P  V P  L +  NA       +   S+ S + 
Sbjct: 518 LHEDDPYRTNTAEAPEAVTPQPLDIAMNATGTCTATLPAISWISVEF 564

>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Length = 502

 Score = 88.0 bits (217), Expect = 6e-21
 Identities = 23/164 (14%), Positives = 48/164 (29%), Gaps = 15/164 (9%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           +A  A L VN          +   +   +    Y+             L+  + +    S
Sbjct: 346 IACLAQL-VN-----VIAPIMTEKNGPAWKQTIYYPFMHASVYGRGVALHPVISSPKYDS 399

Query: 61  IVASAISWEDSE----NAKSFLRIKVVNLR-SNSVNLKVSVDGLGPNSIKLSGSTKTQLT 115
              + + + +S       K  + I  VN    +++ L+  V       +         L 
Sbjct: 400 KDFTDVPYLESIAVYNEEKEEVTIFAVNRDMEDALLLECDVRSFEDYRV----IEHIVLE 455

Query: 116 SSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDL 159
             N+K  NS      V       + + + +   +   S+    L
Sbjct: 456 HDNVKQTNSAQSSPVVPHRNGDAQLSDRKVSATLPKLSWNVIRL 499

>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Length = 513

 Score = 84.6 bits (208), Expect = 1e-19
 Identities = 19/166 (11%), Positives = 44/166 (26%), Gaps = 14/166 (8%)

Query: 1   MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS 60
           +A  A   +N       P     N    +    ++      +     +L   + +    +
Sbjct: 357 IACLAQ-LIN----VIAPIVTERNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDT 411

Query: 61  IVASAISWED----SENAKSFLRIKVVNLR-SNSVNLKVSVDGLGPNSIKLSGSTKTQLT 115
                ++  +        K  + I  VN      + L   V G+    +         L 
Sbjct: 412 SKHEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKDYRL----LEHIVLE 467

Query: 116 SSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLR 161
             +LK  NS         +          +  ++   S+    + +
Sbjct: 468 HQDLKIRNSVNGEEVYPKNSDKSSFDDGILTSMLRRASWNVIRIGK 513

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	179
3ug3_A	504	Alpha-L-arabinofuranosidase; TIM barrel, hydrolase	99.96
2vrq_A	496	Alpha-L-arabinofuranosidase; hydrolase, glycosidas	99.96
2y2w_A	574	Arabinofuranosidase; hydrolase, arabinoxylan, glyc	99.92
2c7f_A	513	Alpha-L-arabinofuranosidase; glycosidase, xylan, a	99.9
1qw9_A	502	Arabinosidase, alpha-L-arabinofuranosidase; hydrol	99.9
3ii1_A	535	Cellulase; CELM2, glucanase-xyanase, glucanase, xy	99.81
2yih_A	524	CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca	99.63
2e4t_A	519	Endoglucanase, xyloglucanase; TIM barrel, TIM-like	99.61
3vny_A	488	Beta-glucuronidase; TIM barrel, greek-KEY, glycosi	99.5
3ik2_A	517	Endoglucanase A; TIM-like barrel, hydrolase; 2.20A	99.25
1w91_A	503	Beta-xylosidase; MAD, seMet, tetramer, hydrolase;	98.4
2y24_A	383	Xylanase; hydrolase, GH5 family, aldotetraouronic	97.86
3kl0_A	401	Glucuronoxylanase XYNC; alpha beta barrel, (beta/a	97.72
2nt0_A	497	Glucosylceramidase; cerezyme, glucocerebrosidase,	97.64
2wnw_A	447	Activated by transcription factor SSRB; hydrolase,	97.5
3clw_A	507	Conserved exported protein; structural genomics, u	97.46
1uhv_A	500	Beta-xylosidase; family 39 glycoside hydrolase, xy	97.35
3zr5_A	656	Galactocerebrosidase; hydrolase, GALC, glycosyl hy	96.77
4ekj_A	500	Beta-xylosidase; TIM-barrel fold, hemicellulase, h	96.26
4aw7_A	591	GH86A beta-porphyranase; hydrolase, porphyran-hexa	88.93
3hg3_A	404	Alpha-galactosidase A; glycoprotein, carbohydrate-	82.4
3cc1_A	433	BH1870 protein, putative alpha-N-acetylgalactosami	81.66
4do4_A	400	Alpha-N-acetylgalactosaminidase; pharmacological c	80.32

>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A

Probab=99.96  E-value=6.3e-29  Score=221.04  Aligned_cols=145  Identities=23%  Similarity=0.307  Sum_probs=123.8

Q ss_pred             CceecceeecCCCCCCCccEEEEcCCceecCcchhhhhhhcccCCCeEEEEEEecCCC------------------CceE
Q 030320            1 MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSS------------------SSIV   62 (179)
Q Consensus         1 ma~yAPl~~~~~~~qW~p~lI~~d~~~~~~tp~Yyv~~lfs~~~g~~~l~~~~~~~~~------------------~~v~   62 (179)
                      |||||||++.. +    | ++.++++ +|+||+||||+||+.|+|+++|++.++++.+                  +.|+
T Consensus       341 mA~~A~lvNv~-~----~-i~~~~~~-~~~tpty~v~~l~~~~~g~~~l~~~v~~~~~~~~~~~~~~~~~~~~~~~p~l~  413 (504)
T 3ug3_A          341 LANLAQLVNAL-G----A-IHTEKDG-LILTPVYKAFELIVNHSGEKLVKTHVESETYNIEGVMFINKMPFSVENAPFLD  413 (504)
T ss_dssp             EEEESCSBSTT-C----S-EEEETTE-EEECHHHHHHHHHHHSCCSEEEEEEEECCEEEEEEEETTTTEEEEEEEEESEE
T ss_pred             EEehhhhhccc-c----e-EEecCCC-cEeccccHHHHHHHhhCCCeEEeEEEecCccccccccccccccccCCCCceEE
Confidence            89999996532 2    2 5555555 9999999999999999999999999887633                  2378


Q ss_pred             EEEEEeccCCCceeeEEEEEEeCCCC-cEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEec
Q 030320           63 ASAISWEDSENAKSFLRIKVVNLRSN-SVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENA  141 (179)
Q Consensus        63 ~sA~~~~~t~~~~~~l~vk~VN~~~~-~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~  141 (179)
                      ++|++|++++    .++||+||++.+ +++++|+|+|++.     ..+++++|+++++.+.|||++|++|+|++ .+...
T Consensus       414 ~sA~~~~~~g----~l~v~~vN~~~~~~~~v~i~l~g~~~-----~~~~~~~Lt~~~~~a~Nt~~~P~~V~p~~-~~~~~  483 (504)
T 3ug3_A          414 AAASISEDGK----KLFIAVVNYRKEDALKVPIRVEGLGQ-----KKATVYTLTGPDVNARNTMENPNVVDITS-ETITV  483 (504)
T ss_dssp             EEEEECTTSC----EEEEEEEECCSSCCEEEEEEETTCCS-----EEEEEEEEECSSTTCCCCSSCTTSSEEEE-EEEEE
T ss_pred             EEEEEeCCCC----EEEEEEEECCCCCCEEEEEEecCCcc-----ceEEEEEEECCCcccccCCCCCCEEEeee-eeEec
Confidence            8999987655    499999999965 5999999999873     57889999999999999999999999999 76778


Q ss_pred             CCeeEEEEcCceEEEEEEecc
Q 030320          142 AKDMDVVISPYSFTSFDLLRE  162 (179)
Q Consensus       142 ~~~~~~~lp~~S~~vi~l~~~  162 (179)
                      ++.++++|||+||+||+|+++
T Consensus       484 ~~~~~~~lp~~S~~vl~l~~~  504 (504)
T 3ug3_A          484 DTEFEHTFKPFSCSVIEVELE  504 (504)
T ss_dssp             CSEEEEEECTTEEEEEEEEC-
T ss_pred             CCEEEEEECCCEEEEEEEEeC
Confidence            899999999999999999763

>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A

Probab=99.96  E-value=4.4e-28  Score=215.75  Aligned_cols=146  Identities=25%  Similarity=0.357  Sum_probs=127.3

Q ss_pred             CceecceeecCCCCCCCccEEEEcCCceecCcchhhhhhhcccCCCeEEEEEEecCC------CCceEEEEEEeccCCCc
Q 030320            1 MASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNS------SSSIVASAISWEDSENA   74 (179)
Q Consensus         1 ma~yAPl~~~~~~~qW~p~lI~~d~~~~~~tp~Yyv~~lfs~~~g~~~l~~~~~~~~------~~~v~~sA~~~~~t~~~   74 (179)
                      ||||||+.. .  .   +++|+||++++++||+||||+||+.|+|+++|++.+++++      .+.|+++|+++++ +  
T Consensus       342 ma~~a~~vn-v--~---~~~i~~~~~~~~~tPtY~v~~l~~~~~g~~~l~~~~~~~~~~~~~~~p~l~a~A~~~~~-g--  412 (496)
T 2vrq_A          342 MANIAQLVN-V--L---QSVILTEGERMLLTPTYHVFNMFKVHQDAELLDTWESVERTGPEGELPKVSVSASRAAD-G--  412 (496)
T ss_dssp             EEEEECSBS-S--S---SCSEEEETTEEEECHHHHHHHHGGGGTTCEEEEEEEECCEESGGGCEESEEEEEEECTT-S--
T ss_pred             EEechhhhC-c--c---cceEEecCCCeEECcchHHHHHHHHhCCCeEEEEEecCCCcccCCCcCCEEEEEEECCC-C--
Confidence            799999842 2  2   4699999999999999999999999999999999988753      1358999998653 3  


Q ss_pred             eeeEEEEEEeCCC-CcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeE-EEecCCeeEEEEcCc
Q 030320           75 KSFLRIKVVNLRS-NSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTL-LENAAKDMDVVISPY  152 (179)
Q Consensus        75 ~~~l~vk~VN~~~-~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~-~~~~~~~~~~~lp~~  152 (179)
                        .++|++||++. ++++++|+++|+...    ..+++++|+++++.++|++++|++|.|++.. +.+.++.++++|||+
T Consensus       413 --~l~v~lvN~~~~~~~~v~l~l~g~~~~----~~~~~~~l~~~~~~~~Nt~~~p~~V~p~~~~~~~~~~~~~~~~lp~~  486 (496)
T 2vrq_A          413 --KIHISLCNLDFETGASVDIELRGLNGG----VSATGTTLTSGRIDGHNTFDEPERVKPAPFRDFKLEGGHLNASLPPM  486 (496)
T ss_dssp             --CEEEEEEECCSSSCEEEEEEEESCSSC----EEEEEEEEECSSTTCBCCSSSTTSSCCEECCCEEEETTEEEEEECSS
T ss_pred             --cEEEEEEECCCCCcEEEEEEecCcccc----ceEEEEEEECCCchhccCCCCCCeEeeeeccceEeeCCEEEEEECCC
Confidence              39999999996 689999999998642    3788999999999999999999999999987 678899999999999


Q ss_pred             eEEEEEEec
Q 030320          153 SFTSFDLLR  161 (179)
Q Consensus       153 S~~vi~l~~  161 (179)
                      ||+||+|+.
T Consensus       487 S~~vl~l~~  495 (496)
T 2vrq_A          487 SVTVLELTA  495 (496)
T ss_dssp             EEEEEEEEE
T ss_pred             EEEEEEEeC
Confidence            999999974

>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum}

Probab=99.92  E-value=5.7e-25  Score=198.56  Aligned_cols=146  Identities=16%  Similarity=0.130  Sum_probs=118.4

Q ss_pred             CceecceeecCCCCCCCccEEEEcCCc-eecCcchhhhhhhcccCCCeEEEEEEecCCC-----C---ceEEEEEEeccC
Q 030320            1 MASYAPLFVNANDRWWTPDAIVFNSAQ-LYGTPSYWVQQFFRESSGATLLNATLLTNSS-----S---SIVASAISWEDS   71 (179)
Q Consensus         1 ma~yAPl~~~~~~~qW~p~lI~~d~~~-~~~tp~Yyv~~lfs~~~g~~~l~~~~~~~~~-----~---~v~~sA~~~~~t   71 (179)
                      |||||++..   ..|    +|.++.+. +|++|+||+|+||+.+.|+++|++.++++.+     +   .|+++|++++++
T Consensus       404 mas~a~lvn---v~~----~i~t~~~g~~~~~PtYy~f~l~~~~~g~~~l~~~~~~~~~~~~~~~~~p~l~a~A~~~~~g  476 (574)
T 2y2w_A          404 SASRAQLVN---VIA----PIMAEEHGPAWRQTTFYPFAEAALHARGQAYAPAISSPTIHTEAYGDVPAIDAVVTWDEQA  476 (574)
T ss_dssp             EEEESCSBS---SSC----SEEECTTSCEEECTTHHHHHHHHHHCCBEEEECEEECCEEECSSSSEEESEEEEEEEETTT
T ss_pred             EEEeeeccC---ccc----eeeEcCCCCeeECchHHHHHHHHHhCCCcEEEEEecCCccccccCCCCccEEEEEEEeCCC
Confidence            789998843   222    46666654 9999999999999999999999999987643     2   488999987654


Q ss_pred             CCceeeEEEEE-EeCC-CCcEEEEEEEc------cCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeE-EEecC
Q 030320           72 ENAKSFLRIKV-VNLR-SNSVNLKVSVD------GLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTL-LENAA  142 (179)
Q Consensus        72 ~~~~~~l~vk~-VN~~-~~~~~v~i~l~------g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~-~~~~~  142 (179)
                      +     ++|++ ||++ .++++|+|+++      |++..    ..+++++|+++++.+.|+|++|++|.|++.. +.+.+
T Consensus       477 ~-----l~v~l~vN~~~~~~~~v~l~l~~~~~~~g~~~~----~~~~~~~l~~~~~~a~Nt~~~p~~V~p~~~~~~~~~~  547 (574)
T 2y2w_A          477 R-----TGLLLAVNRDANTPHTLTIDLSGLPGLPGLGTL----ALGKAQLLHEDDPYRTNTAEAPEAVTPQPLDIAMNAT  547 (574)
T ss_dssp             T-----EEEEEEEECCSSCCEEEEEECTTCC------CC----CEEEEEEECCSSTTCBCCSSCTTSSCCEECCBCCC--
T ss_pred             C-----EEEEEEEcCCCCCCEEEEEEecCccccCCcccc----ceEEEEEEeCCCccccCCCCCCCeeeeecccceeeeC
Confidence            3     99999 9999 66799999999      87642    5789999999999999999999999999884 56778


Q ss_pred             CeeEEEEcCceEEEEEEecc
Q 030320          143 KDMDVVISPYSFTSFDLLRE  162 (179)
Q Consensus       143 ~~~~~~lp~~S~~vi~l~~~  162 (179)
                      +.++++|||+||+||+|+++
T Consensus       548 ~~~~~~lp~~S~~vl~l~~~  567 (574)
T 2y2w_A          548 GTCTATLPAISWISVEFHGK  567 (574)
T ss_dssp             CCEEEEECSSEEEEEEEC--
T ss_pred             CEEEEEECCcEEEEEEEecc
Confidence            89999999999999999765

>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A

Probab=99.90  E-value=1.7e-23  Score=186.86  Aligned_cols=144  Identities=18%  Similarity=0.161  Sum_probs=119.1

Q ss_pred             CceecceeecCCCCCCCccEEEEcCCc--eecCcchhhhhhhcccCCCeEEEEEEecCCC--------CceEEEEEEecc
Q 030320            1 MASYAPLFVNANDRWWTPDAIVFNSAQ--LYGTPSYWVQQFFRESSGATLLNATLLTNSS--------SSIVASAISWED   70 (179)
Q Consensus         1 ma~yAPl~~~~~~~qW~p~lI~~d~~~--~~~tp~Yyv~~lfs~~~g~~~l~~~~~~~~~--------~~v~~sA~~~~~   70 (179)
                      |||||++.. .    |.|  |.++.+.  +|++|+||+|+||+.+.|+.+|++.++++.+        +.|+++|+++++
T Consensus       357 ~a~~a~~~n-v----~~p--i~t~~~~~~~~~~P~y~~f~l~~~~~g~~~l~~~~~~~~~~~~~~~~~p~l~a~A~~~~~  429 (513)
T 2c7f_A          357 IACLAQLIN-V----IAP--IVTERNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDTSKHEDVTDIESVAIYNEE  429 (513)
T ss_dssp             EEEEECSSS-T----TCS--BCCCSSSCCCCBCTTHHHHHHHHHHCCSEEECCEEECCEECCSSCSSEESCEEEEEEETT
T ss_pred             eEehHHhcc-c----ccc--eEEeCCCceEEeCchHHHHHHHHhcCCCeEEEEEecCCcccccccCCCCcEEEEEEEeCC
Confidence            789999853 2    333  5566555  8999999999999999999999998886643        258999998776


Q ss_pred             CCCceeeEEEEEEeCC-CCcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeE-EEecCCeeEEE
Q 030320           71 SENAKSFLRIKVVNLR-SNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTL-LENAAKDMDVV  148 (179)
Q Consensus        71 t~~~~~~l~vk~VN~~-~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~-~~~~~~~~~~~  148 (179)
                      ++    .++|++||++ .++++++|+++|++..    +.+++++|+++++.+.|++++ ++|.|++.. +.++++.++++
T Consensus       430 ~g----~l~v~lvN~~~~~~~~v~l~l~g~~~~----~~~~~~~l~~~~~~~~Nt~~~-~~v~p~~~~~~~~~~~~~~~~  500 (513)
T 2c7f_A          430 KE----EVTIFAVNRNIHEDIVLVSDVRGMKDY----RLLEHIVLEHQDLKIRNSVNG-EEVYPKNSDKSSFDDGILTSM  500 (513)
T ss_dssp             TT----EEEEEEECCCTTSCEEEEEEESCC-------CEEEEEEECCSCTTCBCBTTB-CSSCCEECCC--CCSSEEEEE
T ss_pred             CC----EEEEEEEECCCCCCEEEEEEecCcCcc----ceEEEEEEECCCCccccCCCC-CeeEeeccCceeeeCCEEEEE
Confidence            54    4999999999 6689999999998743    568899999999999999999 999999876 56778899999


Q ss_pred             EcCceEEEEEEe
Q 030320          149 ISPYSFTSFDLL  160 (179)
Q Consensus       149 lp~~S~~vi~l~  160 (179)
                      |||+||++|+|+
T Consensus       501 lp~~S~~vl~l~  512 (513)
T 2c7f_A          501 LRRASWNVIRIG  512 (513)
T ss_dssp             ECSSCEEEEEEC
T ss_pred             ECCCEEEEEEEe
Confidence            999999999996

>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A

Probab=99.90  E-value=3.1e-23  Score=184.59  Aligned_cols=145  Identities=17%  Similarity=0.164  Sum_probs=120.4

Q ss_pred             CceecceeecCCCCCCCccEEEEcCC-ceecCcchhhhhhhcccCCCeEEEEEEecCCC--------CceEEEEEEeccC
Q 030320            1 MASYAPLFVNANDRWWTPDAIVFNSA-QLYGTPSYWVQQFFRESSGATLLNATLLTNSS--------SSIVASAISWEDS   71 (179)
Q Consensus         1 ma~yAPl~~~~~~~qW~p~lI~~d~~-~~~~tp~Yyv~~lfs~~~g~~~l~~~~~~~~~--------~~v~~sA~~~~~t   71 (179)
                      |||||++.. .-+      .|.++.+ ..|++|+||+|+||+.+.|+.+|++.++++.+        +.|+++|++++++
T Consensus       346 ~a~~a~~~n-v~~------pi~t~~~g~~~~~P~y~~f~l~~~~~~~~~l~~~~~~~~~~~~~~~~~p~l~a~A~~~~d~  418 (502)
T 1qw9_A          346 IACLAQLVN-VIA------PIMTEKNGPAWKQTIYYPFMHASVYGRGVALHPVISSPKYDSKDFTDVPYLESIAVYNEEK  418 (502)
T ss_dssp             EEEEECSBS-SSC------SEEECTTSCEEECTTHHHHHHHHHHCCSEEECCEEECCEECCSSCSSEESEEEEEEEETTT
T ss_pred             eeehhhhcc-ccc------ceEEcCCCCEeeCCchHHHHHHHhhCCCcEEEEEecCCccccccCCCCCCEEEEEEEECCC
Confidence            789997743 221      2444444 48899999999999999999999998887632        2589999988765


Q ss_pred             CCceeeEEEEEEeCC-CCcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeE-EEecCCeeEEEE
Q 030320           72 ENAKSFLRIKVVNLR-SNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTL-LENAAKDMDVVI  149 (179)
Q Consensus        72 ~~~~~~l~vk~VN~~-~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~-~~~~~~~~~~~l  149 (179)
                      +    .++|++||++ .++++++|+++|++..    ..+++++|+++++.+.|++++ ++|.|++.. +.+.++.++++|
T Consensus       419 g----~l~v~lvN~~~~~~~~v~l~l~g~~~~----~~~~~~~l~~~~~~~~Nt~~~-~~v~p~~~~~~~~~~~~~~~~l  489 (502)
T 1qw9_A          419 E----EVTIFAVNRDMEDALLLECDVRSFEDY----RVIEHIVLEHDNVKQTNSAQS-SPVVPHRNGDAQLSDRKVSATL  489 (502)
T ss_dssp             T----EEEEEEEECCSSCCEEEEEECTTSCSC----EEEEEEEECCSCTTCBCCSSC-CCCCCBSCCCCEEETTEEEEEE
T ss_pred             C----EEEEEEEECCCCCCEEEEEEeCCcccc----ceEEEEEEECCCCccccCCCC-CeeEeeeccceeeeCCeEEEEE
Confidence            5    4999999999 6689999999998753    568899999999999999999 999999876 467788999999


Q ss_pred             cCceEEEEEEec
Q 030320          150 SPYSFTSFDLLR  161 (179)
Q Consensus       150 p~~S~~vi~l~~  161 (179)
                      ||+||++|+|+.
T Consensus       490 p~~S~~~l~l~~  501 (502)
T 1qw9_A          490 PKLSWNVIRLGK  501 (502)
T ss_dssp             CSSEEEEEEEEC
T ss_pred             CCCEEEEEEEEc
Confidence            999999999974

>3ii1_A Cellulase; CELM2, glucanase-xyanase, glucanase, xylanase, bifunctional enzyme, hydrolase; HET: BGC; 2.25A {Uncultured bacterium} PDB: 3fw6_A

Probab=99.81  E-value=2.3e-19  Score=159.79  Aligned_cols=113  Identities=15%  Similarity=0.237  Sum_probs=90.4

Q ss_pred             cCcchhhhhhhcccCCCeEE--EEEEec--CCCCceEEEEEEeccCCCceeeEEEEEEeCCCC-cEEEEEEEccCCCCcc
Q 030320           30 GTPSYWVQQFFRESSGATLL--NATLLT--NSSSSIVASAISWEDSENAKSFLRIKVVNLRSN-SVNLKVSVDGLGPNSI  104 (179)
Q Consensus        30 ~tp~Yyv~~lfs~~~g~~~l--~~~~~~--~~~~~v~~sA~~~~~t~~~~~~l~vk~VN~~~~-~~~v~i~l~g~~~~~~  104 (179)
                      +||+||||+||+.|+|+.+|  +..+.+  ...+.|+++|+++++.+    +|+|+|||++.+ +++++|+|+|++..  
T Consensus       417 ~TPTYyvF~mYs~h~gg~~L~gdt~V~a~~~dvP~VdasAs~~~~dG----~L~V~LVNrd~~e~~~V~ldL~G~~~~--  490 (535)
T 3ii1_A          417 ATPTYKAIKMYRNYDGNKSAFGDTSVTATAPNPDNVSAFAAVRSSDG----ALTVMVINKYLSGNTPATINLSNFTAQ--  490 (535)
T ss_dssp             TSHHHHHHHHHHCSSSSCCCCCSEEEEEECSCTTTEEEEEEECTTTC----CEEEEEEECCSSSBEEEEEEEESCCBC--
T ss_pred             CCchhHHHHHHHhhCCCcEeccCceeeccCCCCCcEEEEEEEECCCC----eEEEEEEeCCCCCCeEEEEEecCCccc--
Confidence            79999999999999997666  222321  23456999999765554    499999999965 69999999998753  


Q ss_pred             ccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEEEEecc
Q 030320          105 KLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRE  162 (179)
Q Consensus       105 ~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi~l~~~  162 (179)
                        ..+++++|+++  ++.|+|  |+        +.+.++.++++|||+||+||+|++.
T Consensus       491 --~~~~v~tLtg~--~A~NTf--Pd--------~~i~gg~ltvtLPp~SvtvLrL~~g  534 (535)
T 3ii1_A          491 --AQAQVWQLTAA--NTINHL--SN--------VSLSGSSLSLTLPAQSVTLLVIPAS  534 (535)
T ss_dssp             --SEEEEEEECTT--CSCEEC--CC--------EECBTTEEEEEECSSEEEEEEECBC
T ss_pred             --eeEEEEEeeCC--CccccC--CC--------ceecCCeEEEEECCceEEEEEEeCC
Confidence              56778889876  999999  65        3456889999999999999999764

>2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A*

Probab=99.63  E-value=1.2e-15  Score=136.43  Aligned_cols=116  Identities=9%  Similarity=0.078  Sum_probs=88.5

Q ss_pred             ecCcchhhhhhhcccCCC--eEEEEEEecCC--CCceEEEEEEe-ccCCCceeeEEEEEEeCC-CCcEEEEEEEccCCCC
Q 030320           29 YGTPSYWVQQFFRESSGA--TLLNATLLTNS--SSSIVASAISW-EDSENAKSFLRIKVVNLR-SNSVNLKVSVDGLGPN  102 (179)
Q Consensus        29 ~~tp~Yyv~~lfs~~~g~--~~l~~~~~~~~--~~~v~~sA~~~-~~t~~~~~~l~vk~VN~~-~~~~~v~i~l~g~~~~  102 (179)
                      .+||+||||+||+.|+|.  +++++.+.++.  .+.|+++|+++ ++.+    .++|++||++ .++++++|+|+|++..
T Consensus       397 ~~t~ty~~f~my~~~~~~g~~~l~~~V~~~~~~~p~v~a~As~~~~~~g----~l~V~lvNr~~~~~~~v~l~l~g~~~~  472 (524)
T 2yih_A          397 VNNYVSAAYKLYRNYDGKNSTFGDTSVSAQTSDIVNSSVHASVTNASDK----ELHLVVMNKSMDSAFDAQFDLSGAKTY  472 (524)
T ss_dssp             CCHHHHHHHHHHHCTTSSCCCCCSEEEEEEESCTTTEEEEEEESTTCSS----EEEEEEEECCSSCCEEEEEEEECSSCC
T ss_pred             CCCchHHHHHHHHhhccCCceeeeEEEeCCCCCCCcEEEEEEeecCCCC----EEEEEEEECCCCCCEEEEEEecCCccc
Confidence            379999999999999863  67888777653  44699999984 3333    5999999999 5579999999998753


Q ss_pred             ccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEEEEecc
Q 030320          103 SIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRE  162 (179)
Q Consensus       103 ~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi~l~~~  162 (179)
                          ..++++++.+++         |+.+.|.+.. .++++.++++|||+||++|+|+..
T Consensus       473 ----~~~~v~t~~~~~---------~n~~~~~~~~-~~~~~~l~~tLPp~Sv~vl~l~~~  518 (524)
T 2yih_A          473 ----ISGKVWGFDKNS---------SQIKEAAPIT-QISGNRFTYTVPPLTAYHIVLTTG  518 (524)
T ss_dssp             ----CEEEEEEEETTE---------EEEEEEEEEC-CCBTTEEEEEECTTEEEEEEEEC-
T ss_pred             ----eeEEEEEEcCCC---------CCccCCCcce-eccCCeEEEEECCcEEEEEEEecC
Confidence                678888887632         3444443222 467889999999999999999754

>2e4t_A Endoglucanase, xyloglucanase; TIM barrel, TIM-like barrel, composite domain of glycosyl HY families 5, 30, 39 and 51, hydrolase; 0.96A {Clostridium thermocellum} PDB: 2e0p_A 2eo7_A* 2ej1_A* 2eex_A* 2eqd_A*

Probab=99.61  E-value=2e-15  Score=135.00  Aligned_cols=114  Identities=10%  Similarity=0.033  Sum_probs=88.9

Q ss_pred             CcchhhhhhhcccCC--CeEEEEEEecCC--CCceEEEEEEec-cCCCceeeEEEEEEeCCC-CcEEEEEEEccCCCCcc
Q 030320           31 TPSYWVQQFFRESSG--ATLLNATLLTNS--SSSIVASAISWE-DSENAKSFLRIKVVNLRS-NSVNLKVSVDGLGPNSI  104 (179)
Q Consensus        31 tp~Yyv~~lfs~~~g--~~~l~~~~~~~~--~~~v~~sA~~~~-~t~~~~~~l~vk~VN~~~-~~~~v~i~l~g~~~~~~  104 (179)
                      ||+||||+||+.|.|  .+++++.+.++.  .+.|+++|+++. +.+    .++|++||++. ++++++|+|.|++..  
T Consensus       398 tpty~~f~ly~~~~~~g~~~l~~~V~~~~~~~~~v~~~As~~~~~dg----~l~v~lvNr~~~~~~~v~l~l~g~~~~--  471 (519)
T 2e4t_A          398 NYTEAGINLYTNYDGKGGKFGDTSVKCETSDIEVSSAYASIVGEDDS----KLHIILLNKNYDQPTTFNFSIDSSKNY--  471 (519)
T ss_dssp             HHHHHHHHHHHCTTSSSCCCCSEEEEEEESCTTTEEEEEEEETTEEE----EEEEEEEECCSSSCEEEEEEEECSSCC--
T ss_pred             CccchHHHHHHhhCcCCceeeeeEEecCCCCCCcEEEEEEeecCCCC----eEEEEEEECCCCCCeEEEEEEeCCccc--
Confidence            899999999999988  588888887754  446899999873 333    59999999995 579999999998753  


Q ss_pred             ccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEEEEecc
Q 030320          105 KLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRE  162 (179)
Q Consensus       105 ~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi~l~~~  162 (179)
                        ..+++.++.++++         +.+.|.+. ..++++.++++|||+||++|+|+..
T Consensus       472 --~~~~v~t~~~~~~---------~~~~~~~~-~~~~~~~~~~tLPp~Sv~~l~l~~~  517 (519)
T 2e4t_A          472 --TIGNVWAFDRGSS---------NITQRTPI-VNIKDNTFTYTVPALTACHIVLEAA  517 (519)
T ss_dssp             --CCEEEEEEETTEE---------EEEEEEEE-CCCBTTEEEEEECSSEEEEEEEC--
T ss_pred             --eEEEEEEEeCCCc---------CccccCCc-ceeeCCeEEEEECCcEEEEEEEecC
Confidence              6788888876543         44544432 3567889999999999999999754

>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A*

Probab=99.50  E-value=3e-13  Score=120.00  Aligned_cols=129  Identities=16%  Similarity=0.246  Sum_probs=105.6

Q ss_pred             eecCcchhhhhhhcccCCCeEEEEEEec-CCCCceEEEEEEeccCCCceeeEEEEEEeCCCCcEEEEEEEccCCCCcccc
Q 030320           28 LYGTPSYWVQQFFRESSGATLLNATLLT-NSSSSIVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKL  106 (179)
Q Consensus        28 ~~~tp~Yyv~~lfs~~~g~~~l~~~~~~-~~~~~v~~sA~~~~~t~~~~~~l~vk~VN~~~~~~~v~i~l~g~~~~~~~~  106 (179)
                      ....|.||++.||+...|++++++.+.+ .....+++.|+++.. +    .+.|+|+|.+... .++|+|.|...     
T Consensus       345 ~~~~P~Yy~~~l~~~~~G~~vl~~~~~~~~~~~~~~ayA~~~~~-~----~~~vlliN~~~~~-~~~v~l~G~~~-----  413 (488)
T 3vny_A          345 FIARPEYYGMLLFAQAGAGQLLGAKLTDNSAAPLLTAYALRGTD-G----RTRIALFNKNLDA-DVEVAISGVAS-----  413 (488)
T ss_dssp             EEECHHHHHHHHHHHHCSEEEEEEEEESCTTSTTEEEEEEEETT-S----CEEEEEEECCSSC-CEEEEEESCCC-----
T ss_pred             cccCCcHHHHHHHHHHcCCceEeEeeccCCCCccEEEEEEEcCC-C----cEEEEEEECCCCc-cEEEEecCCCC-----
Confidence            5679999999999999999999988763 334579999998743 3    2899999998663 67777778653     


Q ss_pred             CceEEEEEecCCCCCC-------CCCCCCceEe-eeeeEEEecCCeeEEEEcCceEEEEEEecccccce
Q 030320          107 SGSTKTQLTSSNLKDE-------NSFTEPNKVV-PSLTLLENAAKDMDVVISPYSFTSFDLLRESVAMK  167 (179)
Q Consensus       107 ~~~~~~~L~~~d~~a~-------Nt~~~P~~V~-P~~~~~~~~~~~~~~~lp~~S~~vi~l~~~~~~~~  167 (179)
                      ..+++.+|++++.++.       ++|+.+.... |.+..+++.++.+++++||.|+.+|+|.+.+++|.
T Consensus       414 ~~~~v~rLta~~~~a~~~it~~G~s~~~~~~~~~~~~~~~~v~~g~~~v~v~a~sa~lv~f~~~~~~~~  482 (488)
T 3vny_A          414 PSGTVLRLEAPRADDTTDVTFGGAPVGASGSWSPLVQEYVPGHSGQFVLHMRKASGALLEFAKLAAALQ  482 (488)
T ss_dssp             SEEEEEEEECSSTTCSSCCEETTBCCCGGGCCCCSCCEEEECBTTBEEEEECSSEEEEEEECCTTCTTC
T ss_pred             ceEEEEEEECCCcccccCceECCEEecCCCceeecCeEEEEecCCeEEEEEcCCeEEEEEehhhhhhhh
Confidence            5788999999999988       7888764444 66666788899999999999999999999988875

>3ik2_A Endoglucanase A; TIM-like barrel, hydrolase; 2.20A {Clostridium acetobutylicum}

Probab=99.25  E-value=2.9e-11  Score=106.87  Aligned_cols=112  Identities=13%  Similarity=0.061  Sum_probs=82.9

Q ss_pred             CcchhhhhhhcccCC------CeEEEEEEecCCCCceEEEEEEeccCCCceeeEEEEEEeCCC-CcEEEEEEEccCCCCc
Q 030320           31 TPSYWVQQFFRESSG------ATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKVVNLRS-NSVNLKVSVDGLGPNS  103 (179)
Q Consensus        31 tp~Yyv~~lfs~~~g------~~~l~~~~~~~~~~~v~~sA~~~~~t~~~~~~l~vk~VN~~~-~~~~v~i~l~g~~~~~  103 (179)
                      +|.||+|+||.+|.|      ++.++....+.  ..+.+.|+.+++. +  +.|+|.|||.+. ++++++|+|.|++.. 
T Consensus       393 tp~~~af~lY~nydG~g~~fGdt~V~a~ss~~--~~vSayAs~~~~~-d--G~L~V~LvNkdpd~~~tv~i~L~G~k~~-  466 (517)
T 3ik2_A          393 NYVQSAFNLYNNYDGNNSKYGDTDVKCDTSDI--NNSSTYASVTSND-G--NKMDIIVMNKNYTDSINFNFNVSSNKNY-  466 (517)
T ss_dssp             HHHHHHHHHHHCSSSSCCCCCSEEEEEEESCT--TTEEEEEEECTTC-T--TEEEEEEEECCSSCCEEEEEEEECSSCC-
T ss_pred             ChhHHHHHHhhhccccCCccCCeEEEeecCCc--cceeEEEEEecCC-C--CeEEEEEEeCCCCCceEEEEEecCCccc-
Confidence            999999999999988      99999887544  3477777765421 1  249999999995 579999999998643 


Q ss_pred             cccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEEEEec
Q 030320          104 IKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLR  161 (179)
Q Consensus       104 ~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi~l~~  161 (179)
                         ..++++++..         +.|+.+.|.+. .++.++.|+++|||+|++||.|-.
T Consensus       467 ---tsg~V~t~~~---------~spdi~~~~~f-~~isgn~ltvtLPa~SV~vi~~~~  511 (517)
T 3ik2_A          467 ---TSGQVWGFDS---------NSSNITKRDDV-SSISGNKFTYKIPALTAVHIVLLE  511 (517)
T ss_dssp             ---CEEEEEEEET---------TEEEEEEECCC-SCCBTTEEEEEECSSEEEEEEEEC
T ss_pred             ---ceEEEEEecC---------CCCcccccCcc-ccccCCeEEEEeCCceEEEEEEee
Confidence               4566666632         34444444332 256789999999999999998843

>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A*

Probab=98.40  E-value=8.5e-07  Score=78.05  Aligned_cols=118  Identities=10%  Similarity=0.056  Sum_probs=81.0

Q ss_pred             ceecCcchhhhhhhcccCCCeEEEEEEecCCCCceEEEEEEeccCCCceeeEEEEEEeCC----C-CcEEEEEEEccCCC
Q 030320           27 QLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKVVNLR----S-NSVNLKVSVDGLGP  101 (179)
Q Consensus        27 ~~~~tp~Yyv~~lfs~~~g~~~l~~~~~~~~~~~v~~sA~~~~~t~~~~~~l~vk~VN~~----~-~~~~v~i~l~g~~~  101 (179)
                      ...+.|.||+++||+.. |+++|+.  + +.    ...+. +. .+    .+.|.+.|.+    . .+++++|+|.|...
T Consensus       342 ~~~pKPay~a~~~~~~l-g~~~l~~--~-~~----~~~~~-~~-~g----~~~i~l~N~~~~~~~~~~~~v~~~l~g~~~  407 (503)
T 1w91_A          342 HSIPKPTFHAFTFFNAL-GDELLYR--D-GE----MIVTR-RK-DG----SIAAVLWNLVMEKGEGLTKEVQLVIPVSFS  407 (503)
T ss_dssp             GGEECHHHHHHHHHHTC-CSEEEEE--E-TT----EEEEE-CT-TS----CEEEEEECCCCSCCSCCCEEEEEEEECSSS
T ss_pred             CCccChHHHHHHHHHhc-CCcEEEc--C-Cc----eEEEE-eC-CC----cEEEEEEcccCCcCCCCCeeEEEEEecCCC
Confidence            45689999999999976 8888876  2 11    12222 11 12    3999999985    2 35889999988532


Q ss_pred             CccccCceEEEEEecCCCCCC---CCCCCCceEeeeee--------------EEEecCCe--eEEEEcCceEEEEEEecc
Q 030320          102 NSIKLSGSTKTQLTSSNLKDE---NSFTEPNKVVPSLT--------------LLENAAKD--MDVVISPYSFTSFDLLRE  162 (179)
Q Consensus       102 ~~~~~~~~~~~~L~~~d~~a~---Nt~~~P~~V~P~~~--------------~~~~~~~~--~~~~lp~~S~~vi~l~~~  162 (179)
                      .    ...+..+|..+..++.   |.++.|..+.+++.              .....++.  +.++||++|+.+|+|+..
T Consensus       408 ~----~~~~~~~ld~~~~~~~~~w~~~g~p~~~~~~~~~~l~~~~~p~~~~~~~~~~~g~~~~~~~l~~~sv~~i~l~~~  483 (503)
T 1w91_A          408 A----VFIKRQIVNEQYGNAWRVWKQMGRPRFPSRQAVETLRQVAQPHVMTEQRRATDGVIHLSIVLSKNEVTLIEIEQV  483 (503)
T ss_dssp             E----EEEEEEEESSSSSCHHHHHHHTTCCSSCCHHHHHHHHHHTSCEEEEEEEECGGGEEEEEEEECTTCEEEEEEEEC
T ss_pred             c----EEEEEEEeCCCCCCHHHHHHHcCCCCCCCHHHHHHHHHhCCCcccceeEeccCCeEEEEEEcCcCeEEEEEEEec
Confidence            1    3477788887776666   77888876633321              22334555  689999999999999753

>2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A*

Probab=97.86  E-value=0.00035  Score=59.80  Aligned_cols=106  Identities=20%  Similarity=0.129  Sum_probs=72.3

Q ss_pred             CcchhhhhhhcccC--CCeEEEEEEecCCCCceEEEEEEeccCCCceeeEEEEEEeCCCCcEEEEEEEccCCCCccccCc
Q 030320           31 TPSYWVQQFFRESS--GATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSG  108 (179)
Q Consensus        31 tp~Yyv~~lfs~~~--g~~~l~~~~~~~~~~~v~~sA~~~~~t~~~~~~l~vk~VN~~~~~~~v~i~l~g~~~~~~~~~~  108 (179)
                      ++.||++..|+.+-  |.+.+.+...  ....|.++|-.+.+ +    .++|-++|.+.+++.++++|.+...     ..
T Consensus       275 ~~~~y~~~hfSkfirPG~~ri~~~~~--~~~~l~~~Af~~pd-g----~~vvV~~N~~~~~~~~~~~l~~~~~-----~~  342 (383)
T 2y24_A          275 SKRGYVMSQYARFVRPGALRIQATEN--PQSNVHLTAYKNTD-G----KMVIVAVNTNDSDQMLSLNISNANV-----TK  342 (383)
T ss_dssp             CHHHHHHHHHHTTSCTTCEEEEECSC--SBTTEEEEEEECTT-C----CEEEEEEECSSSCEEEEEEEESCCC-----CE
T ss_pred             eeHHHHHHHHhcccCCCCEEEEecCC--CCCceEEEEEECCC-C----CEEEEEEeCCCCceeEEEEecCCcc-----ce
Confidence            67899999999964  8888875432  12357777776543 2    2888899999888889999987543     34


Q ss_pred             eEEEEEecCCCCCCCCCCCCceEeeeeeEEEe-cCCeeEEEEcCceEEEEEEe
Q 030320          109 STKTQLTSSNLKDENSFTEPNKVVPSLTLLEN-AAKDMDVVISPYSFTSFDLL  160 (179)
Q Consensus       109 ~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~-~~~~~~~~lp~~S~~vi~l~  160 (179)
                      .+.++ +..+   .| +      .+ ...+.+ .++.++++|||+|++.+.++
T Consensus       343 ~~~y~-T~~~---~~-~------~~-~~~~~~~~~~~~~~~lpa~Sv~T~v~~  383 (383)
T 2y24_A          343 FEKYS-TSAS---LN-V------EY-GGSSQVDSSGKATVWLNPLSVTTFVSK  383 (383)
T ss_dssp             EEEEE-ESSS---CS-S------EE-EEEEECCTTSEEEEEECTTEEEEEEEC
T ss_pred             eEEEE-ccCc---cc-c------cc-ccceeeccCCEEEEEECCCeeEEEEeC
Confidence            44433 3322   22 1      22 223455 57889999999999988763

>3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A*

Probab=97.72  E-value=0.00044  Score=59.74  Aligned_cols=107  Identities=21%  Similarity=0.175  Sum_probs=73.8

Q ss_pred             cCcchhhhhhhcccC--CCeEEEEEEecCCCCceEEEEEEeccCCCceeeEEEEEEeCCCCcEEEEEEEccCCCCccccC
Q 030320           30 GTPSYWVQQFFRESS--GATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLS  107 (179)
Q Consensus        30 ~tp~Yyv~~lfs~~~--g~~~l~~~~~~~~~~~v~~sA~~~~~t~~~~~~l~vk~VN~~~~~~~v~i~l~g~~~~~~~~~  107 (179)
                      .++.||++..|+.+-  |.+.+.+...  ..+.+.++|-.+  .+    .++|-++|.+.+++.++++|.|+..     .
T Consensus       283 ~~~~~y~l~hfSrfIrPGa~RI~s~~~--~~~~~~~~A~~~--dg----~~vvV~~N~~~~~~~~~~~l~g~~~-----~  349 (401)
T 3kl0_A          283 ISKRGYNMAHFSKFVRPGYVRIDATKN--PNANVYVSAYKG--DN----KVVIVAINKSNTGVNQNFVLQNGSA-----S  349 (401)
T ss_dssp             BCHHHHHHHHHHTTSCTTCEEEEECSC--SBTTEEEEEEEE--TT----EEEEEEEECSSSCEEEEEEEESCCE-----E
T ss_pred             EchHHHHHHHhhcccCCCCEEEecccC--CCCCeEEEEEEC--CC----eEEEEEEcCCCCcEEEEEEEcCCCc-----c
Confidence            378999999999974  8888876432  123466777643  23    3889999999999999999998643     3


Q ss_pred             ceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEEEEec
Q 030320          108 GSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLR  161 (179)
Q Consensus       108 ~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi~l~~  161 (179)
                      ..+.++ |..+   .|       ..+. ..+.+.++.|+++|||.|++-+.+.+
T Consensus       350 ~~~~~~-Ts~~---~~-------~~~~-~~~~v~~~~~~~~lpa~SV~T~v~~~  391 (401)
T 3kl0_A          350 NVSRWI-TSSS---SN-------LQPG-TNLTVSGNHFWAHLPAQSVTTFVVNR  391 (401)
T ss_dssp             EEEEEE-EETT---EE-------EEEC-CCEECBTTEEEEEECSSEEEEEEEEE
T ss_pred             eeEEEE-ecCC---CC-------cccc-cceEeeCCEEEEEECCCeEEEEEEec
Confidence            344333 3322   11       1211 23456789999999999999998854

>2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ...

Probab=97.64  E-value=0.0008  Score=59.56  Aligned_cols=100  Identities=17%  Similarity=0.271  Sum_probs=71.3

Q ss_pred             CCCCCCC----ccEEEEc--CCceecCcchhhhhhhcccC--CCeEEEEEEecCCCCceEEEEEEeccCCCceeeEEEEE
Q 030320           11 ANDRWWT----PDAIVFN--SAQLYGTPSYWVQQFFRESS--GATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKV   82 (179)
Q Consensus        11 ~~~~qW~----p~lI~~d--~~~~~~tp~Yyv~~lfs~~~--g~~~l~~~~~~~~~~~v~~sA~~~~~t~~~~~~l~vk~   82 (179)
                      .+++.|-    ..+|..|  .+++.++|.||++..|+.+-  |.+.+.+....  ...|.++|-.+.++     .++|-+
T Consensus       388 ~ggp~~~~n~~~~~i~v~~~~g~~~~~~~yY~~~hfSkfirPGa~rI~~~~~~--~~~l~~~Af~npdg-----~~vvV~  460 (497)
T 2nt0_A          388 EGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQ--KNDLDAVALMHPDG-----SAVVVV  460 (497)
T ss_dssp             TSCCCSSCCCCCCSEEEEGGGTEEEECHHHHHHHHHHTTCCTTCEEEEEEESS--CCSEEEEEEECTTS-----CEEEEE
T ss_pred             CCCCCCCCCccCceEEEeCCCCeEEECHHHHHHHhhhcccCCCCEEEEeccCC--CCceEEEEEECCCC-----CEEEEE
Confidence            3455564    2344444  46799999999999999964  88888875432  12477778765442     288889


Q ss_pred             EeCCCCcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEEEEe
Q 030320           83 VNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLL  160 (179)
Q Consensus        83 VN~~~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi~l~  160 (179)
                      +|.+.+++.++|++.                                           .++.++++|||+|++-+.++
T Consensus       461 ~N~~~~~~~~~v~~~-------------------------------------------~~~~~~~~lpa~Sv~T~v~~  495 (497)
T 2nt0_A          461 LNRSSKDVPLTIKDP-------------------------------------------AVGFLETISPGYSIHTYLWH  495 (497)
T ss_dssp             EECSSSCEEEEEEET-------------------------------------------TTEEEEEEECTTEEEEEEEC
T ss_pred             EeCCCCCEEEEEEeC-------------------------------------------CCCEEEEEECCCeEEEEEEe
Confidence            999988877776541                                           12468899999999988875

>2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp}

Probab=97.50  E-value=0.0014  Score=57.15  Aligned_cols=93  Identities=13%  Similarity=0.133  Sum_probs=69.0

Q ss_pred             CccEEEEcC--CceecCcchhhhhhhcccC--CCeEEEEEEecCCCCceEEEEEEeccCCCceeeEEEEEEeCCCCcEEE
Q 030320           17 TPDAIVFNS--AQLYGTPSYWVQQFFRESS--GATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKVVNLRSNSVNL   92 (179)
Q Consensus        17 ~p~lI~~d~--~~~~~tp~Yyv~~lfs~~~--g~~~l~~~~~~~~~~~v~~sA~~~~~t~~~~~~l~vk~VN~~~~~~~v   92 (179)
                      .-.+|..|+  +++.++|.||++..|+.+-  |.+.+.+...   ...|.++|-.+.+ +    .++|-++|.+.+++.+
T Consensus       348 ~~g~i~vd~~~g~~~~~~~yy~~~hfSkfirPGa~rI~~~~~---~~~l~~~Af~~pd-g----~~vvVv~N~~~~~~~~  419 (447)
T 2wnw_A          348 CEAPIQYDAQNDVLRRNHSWYGIGHFCRYVRPGARVMLSSSY---DNLLEEVGFVNPD-G----ERVLVVYNRDVQERRC  419 (447)
T ss_dssp             BCCSEEEETTTTEEEECHHHHHHHHHHTTCCTTCEEEEEEES---CTTEEEEEEECTT-S----CEEEEEEECSSSCEEE
T ss_pred             cCccEEEeCCCCeEEEChHHHHHHHHHhhcCCCCEEEEeecC---CCCeEEEEEECCC-C----CEEEEEEeCCCCCEEE
Confidence            334676664  6799999999999999964  8888887532   2357777876554 2    2788889999888887


Q ss_pred             EEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEEEEec
Q 030320           93 KVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLR  161 (179)
Q Consensus        93 ~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi~l~~  161 (179)
                      +|++.|                                            +.++++|||+|++-+.++.
T Consensus       420 ~~~~~g--------------------------------------------~~~~~~lpa~Sv~T~v~~~  444 (447)
T 2wnw_A          420 RVLDGD--------------------------------------------KEIALTLPPSGASTLLWRQ  444 (447)
T ss_dssp             EEEETT--------------------------------------------EEEEEEECTTCEEEEEECC
T ss_pred             EEEECC--------------------------------------------cEEEEEECCCeEEEEEECC
Confidence            776531                                            1378899999999888753

>3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis}

Probab=97.46  E-value=0.00057  Score=60.58  Aligned_cols=115  Identities=10%  Similarity=0.079  Sum_probs=74.5

Q ss_pred             EEEEcCCceecCcchhhhhhhcccC--CCeEEEEEEec-----CCCCceEEEEEEeccCCCceeeEEEEEEeCCCCcEEE
Q 030320           20 AIVFNSAQLYGTPSYWVQQFFRESS--GATLLNATLLT-----NSSSSIVASAISWEDSENAKSFLRIKVVNLRSNSVNL   92 (179)
Q Consensus        20 lI~~d~~~~~~tp~Yyv~~lfs~~~--g~~~l~~~~~~-----~~~~~v~~sA~~~~~t~~~~~~l~vk~VN~~~~~~~v   92 (179)
                      +|..|.+.+..+|.||++..|+.+-  |.+.+.+....     .....|.++|- +.. +    .++|-++|.+.+++.+
T Consensus       379 li~~~~g~~~~~~~yy~~~hfSkfirPGa~rI~~~~~~~~~~~~~~~~l~~~Af-~~d-g----~~vvV~~N~~~~~~~~  452 (507)
T 3clw_A          379 LSLQYDGEISTTKMLWTTANYSFFVRPGMKRIAIKPTYKISDLEAATSLMISSY-TDG-K----EVVTVAINYSKENQVI  452 (507)
T ss_dssp             GGGGTCCEEEECHHHHHHHHHHTTSCTTCEEEEEEESSCCCHHHHTTSEEEEEE-ECS-S----CEEEEEEECSSSCEEE
T ss_pred             eEEEeCCEEEEchhHHHHhhhhcccCCCcEEEeccccccccccCCCCceEEEEE-cCC-C----cEEEEEEeCCCCCeEE
Confidence            4444456788999999999999964  88888875410     01234667775 432 2    3899999999999999


Q ss_pred             EEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEEEEeccc
Q 030320           93 KVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRES  163 (179)
Q Consensus        93 ~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi~l~~~~  163 (179)
                      +|.+.|..       .. ....+..+   .|       ..+.  .+  .+ .++++|||+|++.+.+...+
T Consensus       453 ~i~~~~~~-------~~-~~y~T~~~---~~-------l~~~--~v--~~-~~~~~lpa~Sv~T~v~~~~~  500 (507)
T 3clw_A          453 SLNCDHAQ-------KG-KVYLTTID---KN-------LRYM--GE--QP-LKKLQLPARSVATIVVEDNE  500 (507)
T ss_dssp             EEECTTCC-------EE-EEEEESSS---CS-------SEEE--EE--EE-TTSEEECTTEEEEEEC----
T ss_pred             EEEcCCCc-------ee-eeEEecCc---cC-------ceee--cc--cc-cEEEEECCCeeEEEEEeCcc
Confidence            99998732       12 33444332   12       1121  12  23 68999999999999886654

>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A

Probab=97.35  E-value=0.00077  Score=59.02  Aligned_cols=114  Identities=9%  Similarity=0.133  Sum_probs=69.7

Q ss_pred             eecCcchhhhhhhcccCCCeEEEEEEecCCCCceEEEEEEeccCCCceeeEEEEEEeCC-----CCcEEEEEEEccCCCC
Q 030320           28 LYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKVVNLR-----SNSVNLKVSVDGLGPN  102 (179)
Q Consensus        28 ~~~tp~Yyv~~lfs~~~g~~~l~~~~~~~~~~~v~~sA~~~~~t~~~~~~l~vk~VN~~-----~~~~~v~i~l~g~~~~  102 (179)
                      ..+.|.||++++++.. |+++|+.  + +  ..  ..+. . ..+    .+.|-+.|..     ...++++|+|.|....
T Consensus       342 ~~pKPay~a~~~l~~l-g~~~l~~--~-~--~~--~v~~-~-~~g----~~~il~~n~~~~~~~~~~~~~~l~l~~~~g~  407 (500)
T 1uhv_A          342 MIPKPTFYTFKFFNAM-GEEMLYR--D-E--HM--LVTR-R-DDG----SVALIAWNEVMDKTENPDEDYEVEIPVRFRD  407 (500)
T ss_dssp             TEECHHHHHHHHHTTC-CSEEEEE--E-T--TE--EEEE-C-TTS----CEEEEEEECCCSCCSCCCEEEEEEEECSSSB
T ss_pred             CCcCcHHHHHHHHHHc-cCcEEEc--C-C--ce--EEEE-c-CCC----cEEEEEEeccCCCCCCCCeeEEEEEecCCCc
Confidence            4589999999999875 6677765  2 1  11  1132 1 112    3899999996     3458899999884321


Q ss_pred             ccccCceEEEEEecCC--------------------CCCCCCCCCCceEeeeeeEEEecCCe--eEEEEcCceEEEEEEe
Q 030320          103 SIKLSGSTKTQLTSSN--------------------LKDENSFTEPNKVVPSLTLLENAAKD--MDVVISPYSFTSFDLL  160 (179)
Q Consensus       103 ~~~~~~~~~~~L~~~d--------------------~~a~Nt~~~P~~V~P~~~~~~~~~~~--~~~~lp~~S~~vi~l~  160 (179)
                          ...+...|-...                    ....|.++.|..+.|...   ..+++  +.++||++|+.+|+|+
T Consensus       408 ----~~~~~~~~d~~~g~~~~~w~~~g~p~~~t~~~~~~l~~~~~p~~~~~~~~---~~~g~~~~~~~l~~~~v~~i~l~  480 (500)
T 1uhv_A          408 ----VFIKRQLIDEEHGNPWGTWIHMGRPRYPSKEQVNTLREVAKPEIMTSQPV---ANDGYLNLKFKLGKNAVVLYELT  480 (500)
T ss_dssp             ----EEEEEEEESSSSSCHHHHHHHTTCCSSCCHHHHHHHHHHSSCEEEEECCB---CBTTEEEEEEEECTTEEEEEEEE
T ss_pred             ----EEEEEEEeCCCCCCHHHHHHHcCCCCCcCHHHHHHHHHcCCCcccceeEe---ccCCeEEEEEEcCcCeEEEEEEE
Confidence                234444553221                    111223455655544332   34555  7889999999999997


Q ss_pred             cc
Q 030320          161 RE  162 (179)
Q Consensus       161 ~~  162 (179)
                      ..
T Consensus       481 ~~  482 (500)
T 1uhv_A          481 ER  482 (500)
T ss_dssp             EC
T ss_pred             ec
Confidence            54

>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A*

Probab=96.77  E-value=0.012  Score=53.79  Aligned_cols=131  Identities=9%  Similarity=0.002  Sum_probs=78.6

Q ss_pred             CCCCCCC-ccEEEEc---CCceecCcchhhhhhhcccC--CCeEEEEEEecCCCCceEEEEEEeccCCCceeeEEEEEEe
Q 030320           11 ANDRWWT-PDAIVFN---SAQLYGTPSYWVQQFFRESS--GATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKVVN   84 (179)
Q Consensus        11 ~~~~qW~-p~lI~~d---~~~~~~tp~Yyv~~lfs~~~--g~~~l~~~~~~~~~~~v~~sA~~~~~t~~~~~~l~vk~VN   84 (179)
                      .+++.|. ..+|.-|   .+....+|.||++..|+.+-  |.+.+.+....  ...+..+|-.+.++ +    ++|-++|
T Consensus       286 ~ggp~~~~~glI~~~~~~~g~~~~~~~yY~~ghfSkFIrPGa~RI~~s~~~--~~~~~~vAf~npdG-~----~vvVv~t  358 (656)
T 3zr5_A          286 YEELPYGRSGLMTAQEPWSGHYVVASPIWVSAHTTQFTQPGWYYLKTVGHL--EKGGSYVALTDGLG-N----LTIIIET  358 (656)
T ss_dssp             CTTSTTTTCSSEECCCTTTCCCBCCHHHHHHHHHHTTCCTTCEEESCCEEC--TTSCEEEEEECSSS-C----EEEEEEC
T ss_pred             CCCCCCCCceEEEeccCCCCeEEECHHHhHhhhhhcccCCCCEEEeccccc--CCCeeEEEEECCCC-C----EEEEEEe
Confidence            3455552 2467666   46788999999999999964  88888743321  13466777766543 2    6666665


Q ss_pred             CC---------------CCcEEEEEEEcc-CCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEe--cCCeeE
Q 030320           85 LR---------------SNSVNLKVSVDG-LGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLEN--AAKDMD  146 (179)
Q Consensus        85 ~~---------------~~~~~v~i~l~g-~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~--~~~~~~  146 (179)
                      -+               ..++.++++|.| +...    ....+++-..+...      .....+.. ..+.+  .++.|+
T Consensus       359 ~~~~~~~~~~~~~~~~n~s~q~~tf~l~g~~~~~----~~~~vw~T~~~~~~------~~~~f~~~-~~~~~~~~~g~~s  427 (656)
T 3zr5_A          359 MSHQHSMCIRPYLPYYNVSHQLATFTLKGSLREI----QELQVWYTKLGTPQ------QRLHFKQL-DTLWLLDGSGSFT  427 (656)
T ss_dssp             CCSTTCCCSSSCCCCCCCCCEEEEEEECGGGTTC----CEEEEEEEECC---------CCEEEEEE-EEEECTTTTCEEE
T ss_pred             cccccccccccCcccCCCCceEEEEEEeccccCC----ceeEEEEecCCCCC------chhhcEec-CceEEecCCCEEE
Confidence            33               346889999985 3321    34444443332111      11222222 13444  458999


Q ss_pred             EEEcCceEEEEEE
Q 030320          147 VVISPYSFTSFDL  159 (179)
Q Consensus       147 ~~lp~~S~~vi~l  159 (179)
                      ++|||.|+..+..
T Consensus       428 ~~~~~~sv~T~tt  440 (656)
T 3zr5_A          428 LELEEDEIFTLTT  440 (656)
T ss_dssp             EEECTTEEEEEES
T ss_pred             EEECCCeEEEEEE
Confidence            9999999988865

>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides}

Probab=96.26  E-value=0.019  Score=49.72  Aligned_cols=23  Identities=17%  Similarity=0.392  Sum_probs=18.1

Q ss_pred             eecCcchhhhhhhcccCCCeEEE
Q 030320           28 LYGTPSYWVQQFFRESSGATLLN   50 (179)
Q Consensus        28 ~~~tp~Yyv~~lfs~~~g~~~l~   50 (179)
                      ..+-|.||+|+|++...|..+..
T Consensus       345 ~~pKPay~a~~~l~~L~g~~l~~  367 (500)
T 4ekj_A          345 GIRKPSWFAYKYLNAIKGRELVC  367 (500)
T ss_dssp             SCBCHHHHHHHHHTTCCSEEEEE
T ss_pred             CCcCcHHHHHHHHHHhcCcEEec
Confidence            34679999999998877776543

>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius}

Probab=88.93  E-value=13  Score=33.52  Aligned_cols=117  Identities=14%  Similarity=0.052  Sum_probs=72.0

Q ss_pred             CCceecCcchhhhhhhcccCCCeEEEEEEecCCCCceEEEEEEeccCCCceeeEEEEEEeCCCCcEEEEEEEccCCCCcc
Q 030320           25 SAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSI  104 (179)
Q Consensus        25 ~~~~~~tp~Yyv~~lfs~~~g~~~l~~~~~~~~~~~v~~sA~~~~~t~~~~~~l~vk~VN~~~~~~~v~i~l~g~~~~~~  104 (179)
                      .+.+..|+-.+.++|++.-.|..+...+.+    ..|.+-|..|.   +   .++|-|=|...++++|.+++-|....  
T Consensus       350 ~~~wv~T~l~~FyeLW~dV~G~Rv~~~Ss~----pDv~v~A~vdg---~---~lyViLnNL~~~~~~v~L~~~~~~~~--  417 (591)
T 4aw7_A          350 NTTWRLNDKKYFFELWKNVKGERVDITSSN----PDIQVQAFKDG---G---RLYIALDNLDDNPQTVYLNNKNSWKD--  417 (591)
T ss_dssp             TCCEEECTTHHHHHHHTTCCSEEEEEEESS----TTEEEEEEEET---T---EEEEEEEECSSSCEEEEEECTTTTTT--
T ss_pred             CCceEEchHHHHHHHhccCCceEeecccCC----cCceeeeEEcC---C---EEEEEEcCCCCCceeEEEeccCCccc--
Confidence            367788999999999999999855444333    34556666543   2   49999999999998888887653222  


Q ss_pred             ccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEEEEeccccc
Q 030320          105 KLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVA  165 (179)
Q Consensus       105 ~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi~l~~~~~~  165 (179)
                       ...++...|.=..         ...+.-.+..+  ....=+++|.+..-.||++...+.+
T Consensus       418 -i~~v~~r~L~~~~---------~~~~~~~~~~~--~s~p~si~L~~~eT~vl~~~~~s~~  466 (591)
T 4aw7_A          418 -VSNVTKRSLYVNY---------NAGIEYTEQNV--PSMPESISIVPNQTIVLVADVSSSA  466 (591)
T ss_dssp             -EEEEEEEEEEEET---------TTEEEEEEEEE--SSCCSEEEECTTEEEEEEEEECC-C
T ss_pred             -cceeEeEEeeecC---------CCCceeeeeec--ccCCceeEecCCceEEEEEECCCcc
Confidence             1344455553211         11111122222  2222367888888888888766543

>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*

Probab=82.40  E-value=7.8  Score=33.20  Aligned_cols=70  Identities=11%  Similarity=0.081  Sum_probs=41.2

Q ss_pred             EEEEEEeCCC--CcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEE
Q 030320           78 LRIKVVNLRS--NSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFT  155 (179)
Q Consensus        78 l~vk~VN~~~--~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~  155 (179)
                      .+|.+.|+++  +++++++.+..++...  ........+.  |+-.     +      +........+.+++++|||.+.
T Consensus       318 ~aValfN~~~~~~~~~vtv~~~~lGl~~--~~~~~~~~vr--DLW~-----~------~~lg~~~~~~~~~~~V~pHg~~  382 (404)
T 3hg3_A          318 WAVAMINRQEIGGPRSYTIAVASLGKGV--ACNPACFITQ--LLPV-----K------RKLGFYEWTSRLRSHINPTGTV  382 (404)
T ss_dssp             EEEEEEECCCSSSCEEEEEEGGGSGGGT--TTSSEEEEEE--EESS-----C------EEEEEEETTCEEEEEECTTCEE
T ss_pred             EEEEEEEcCCCCCceEEEEEHHHcCCcc--cCCCCceEEE--ECCC-----C------cccccccccceEEEEECCCeEE
Confidence            7888999998  7899999987554310  0001111111  2211     1      0011111246899999999999


Q ss_pred             EEEEecc
Q 030320          156 SFDLLRE  162 (179)
Q Consensus       156 vi~l~~~  162 (179)
                      ++||...
T Consensus       383 llrlt~~  389 (404)
T 3hg3_A          383 LLQLENT  389 (404)
T ss_dssp             EEEEEEH
T ss_pred             EEEEEcC
Confidence            9999654

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}

Probab=81.66  E-value=4.2  Score=34.90  Aligned_cols=64  Identities=13%  Similarity=0.131  Sum_probs=40.7

Q ss_pred             eEEEEEEeCCCCcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEec-CCeeEEEEcCceEE
Q 030320           77 FLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENA-AKDMDVVISPYSFT  155 (179)
Q Consensus        77 ~l~vk~VN~~~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~-~~~~~~~lp~~S~~  155 (179)
                      ..+|.+.|++.++.++++.+..++..    ...++.-|-.+           .     ... ... ++.++++||||.+.
T Consensus       367 ~~~val~N~~~~~~~~~~~~~~lgl~----~~~~v~Dlw~~-----------~-----~~g-~~~~~~~~~~~v~~hg~~  425 (433)
T 3cc1_A          367 EAYVALFNLHDQQKTLQFRLDMVGIM----ETVQLFNVWDR-----------S-----FLQ-SLAPSESFQIELKPHQSM  425 (433)
T ss_dssp             CEEEEEEECSSSCEEEEECGGGTTCC----SCEEEEETTTT-----------E-----EEE-EECTTCCEEEEECTTCEE
T ss_pred             CEEEEEEeCCCCCEEEEEEHHHcCCC----CceEEEECCCC-----------C-----ccc-cccCCceEEEEECCCcEE
Confidence            37899999998888888888755432    22222222211           0     011 111 23799999999999


Q ss_pred             EEEEec
Q 030320          156 SFDLLR  161 (179)
Q Consensus       156 vi~l~~  161 (179)
                      +++|..
T Consensus       426 l~~l~~  431 (433)
T 3cc1_A          426 MLKLSP  431 (433)
T ss_dssp             EEEEEE
T ss_pred             EEEEEe
Confidence            999864

>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*

Probab=80.32  E-value=8  Score=32.21  Aligned_cols=66  Identities=11%  Similarity=0.087  Sum_probs=40.2

Q ss_pred             eEEEEEEeC-CCCcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEE
Q 030320           77 FLRIKVVNL-RSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFT  155 (179)
Q Consensus        77 ~l~vk~VN~-~~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~  155 (179)
                      ..+|.+.|+ +++++++++.|..++..    . ...+.+.  |+-.     + +.+     ...-.++.|+++|||+.+.
T Consensus       318 ~~~va~~N~~~~~~~~~~~~l~~lGl~----~-~~~y~vr--Dlw~-----~-~~~-----g~~~~~~~~~~~v~phg~~  379 (400)
T 4do4_A          318 ASALVFFSCRTDMPYRYHSSLGQLNFT----G-SVIYEAQ--DVYS-----G-DII-----SGLRDETNFTVIINPSGVV  379 (400)
T ss_dssp             CEEEEEEECCSSSCEEEEEEGGGGTCC----T-TCEEEEE--ETTT-----C-CEE-----EEECTTCEEEEEECTTCEE
T ss_pred             CEEEEEEECCCCCcEEEEEEHHHcCCC----C-CCeEEEE--ECcC-----C-cee-----ccccCCceEEEEECCCeEE
Confidence            378889997 56789999998755432    1 1123332  2221     1 011     1111356799999999999


Q ss_pred             EEEEe
Q 030320          156 SFDLL  160 (179)
Q Consensus       156 vi~l~  160 (179)
                      ++||.
T Consensus       380 l~~lt  384 (400)
T 4do4_A          380 MWYLY  384 (400)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            99983

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	179
d2c7fa1	131	b.71.1.2 (A:2-16,A:387-502) Alpha-l-arabinofuranos	4e-10
d1qw9a1	130	b.71.1.2 (A:5-17,A:385-501) Alpha-l-arabinofuranos	7e-05

>d2c7fa1 b.71.1.2 (A:2-16,A:387-502) Alpha-l-arabinofuranosidase {Clostridium thermocellum [TaxId: 1515]} Length = 131

class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51
domain: Alpha-l-arabinofuranosidase
species: Clostridium thermocellum [TaxId: 1515]

 Score = 53.0 bits (127), Expect = 4e-10
 Identities = 22/135 (16%), Positives = 40/135 (29%), Gaps = 22/135 (16%)

Query: 36  VQQFFRESSGATLLNATLLTNSS----------SSIVASAISWEDSENAKSFLRIKVVNL 85
           V + ++ + G  L     + NS           + I + AI  E+ E       I  VN 
Sbjct: 7   VDKDYKIAEGIVL---QPVINSPLHDTSKHEDVTDIESVAIYNEEKEEV----TIFAVNR 59

Query: 86  -RSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKD 144
                + L   V G+    +         L   +LK  NS         +          
Sbjct: 60  NIHEDIVLVSDVRGMKDYRL----LEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGI 115

Query: 145 MDVVISPYSFTSFDL 159
           +  ++   S+    +
Sbjct: 116 LTSMLRRASWNVIRI 130

>d1qw9a1 b.71.1.2 (A:5-17,A:385-501) Alpha-l-arabinofuranosidase {Bacillus stearothermophilus [TaxId: 1422]} Length = 130

class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51
domain: Alpha-l-arabinofuranosidase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 38.7 bits (90), Expect = 7e-05
 Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 5/83 (6%)

Query: 78  LRIKVVNL-RSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLT 136
           + I  VN    +++ L+  V       +         L   N+K  NS      V     
Sbjct: 50  VTIFAVNRDMEDALLLECDVRSFEDYRV----IEHIVLEHDNVKQTNSAQSSPVVPHRNG 105

Query: 137 LLENAAKDMDVVISPYSFTSFDL 159
             + + + +   +   S+    L
Sbjct: 106 DAQLSDRKVSATLPKLSWNVIRL 128

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	179
d2c7fa1	131	Alpha-l-arabinofuranosidase {Clostridium thermocel	99.93
d1qw9a1	130	Alpha-l-arabinofuranosidase {Bacillus stearothermo	99.91
d1nofa1	106	Glycosyl hydrolase family 5 xylanase {Erwinia chry	97.56
d1ji1a2	83	Maltogenic amylase {Thermoactinomyces vulgaris, TV	96.6
d1wzla2	83	Maltogenic amylase {Thermoactinomyces vulgaris, TV	94.97
d1ea9c2	80	Maltogenic amylase {Bacillus sp., cyclomaltodextri	94.33
d1j0ha2	83	Neopullulanase {Bacillus stearothermophilus [TaxId	94.07
d1uasa1	89	Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	92.38
d1m7xa2	106	1,4-alpha-glucan branching enzyme {Escherichia col	91.34
d1szna1	103	Melibiase {Trichoderma reesei [TaxId: 51453]}	87.84
d1ktba1	95	Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	87.32
d1r46a1	98	Melibiase {Human (Homo sapiens) [TaxId: 9606]}	84.37

>d2c7fa1 b.71.1.2 (A:2-16,A:387-502) Alpha-l-arabinofuranosidase {Clostridium thermocellum [TaxId: 1515]}

class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51
domain: Alpha-l-arabinofuranosidase
species: Clostridium thermocellum [TaxId: 1515]

Probab=99.93  E-value=8.4e-26  Score=167.03  Aligned_cols=116  Identities=17%  Similarity=0.128  Sum_probs=93.3

Q ss_pred             hhhhhcccCCCeEEEEEEecCCCC--------ceEEEEEEeccCCCceeeEEEEEEeCC-CCcEEEEEEEccCCCCcccc
Q 030320           36 VQQFFRESSGATLLNATLLTNSSS--------SIVASAISWEDSENAKSFLRIKVVNLR-SNSVNLKVSVDGLGPNSIKL  106 (179)
Q Consensus        36 v~~lfs~~~g~~~l~~~~~~~~~~--------~v~~sA~~~~~t~~~~~~l~vk~VN~~-~~~~~v~i~l~g~~~~~~~~  106 (179)
                      |||||+.++|..+ ...++|++|.        .|+++|++|++++    +++||+|||+ .++++++|+|+|++..    
T Consensus         7 ~~~~~k~~rG~~L-~~~v~sp~y~~~~~~~vp~ldasA~~d~~~g----~l~i~vVNrs~~e~~~v~i~l~g~~~~----   77 (131)
T d2c7fa1           7 VDKDYKIAEGIVL-QPVINSPLHDTSKHEDVTDIESVAIYNEEKE----EVTIFAVNRNIHEDIVLVSDVRGMKDY----   77 (131)
T ss_dssp             ECTTCEEEESEEE-CCEEECCEECCSSCSSEESCEEEEEEETTTT----EEEEEEECCCTTSCEEEEEEESCC-------
T ss_pred             eeehhhhcCCcEE-EEEecCCCeecCCCCCCCeEEEEEEEcCCCC----EEEEEEEECCCCcCEEEEEEecCCCcc----
Confidence            6788888988855 5568777642        4999999998877    4999999999 5679999999998764    


Q ss_pred             CceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEEEEe
Q 030320          107 SGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLL  160 (179)
Q Consensus       107 ~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi~l~  160 (179)
                      +.++.++|+|+|+++.|||++|+.+.|+...+++.++.++++|||+||+||||.
T Consensus        78 ~~~e~~~L~~~d~~a~NT~e~~~vvp~~~~~~~~~~~~l~~tlPp~S~~virLg  131 (131)
T d2c7fa1          78 RLLEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGILTSMLRRASWNVIRIG  131 (131)
T ss_dssp             CEEEEEEECCSCTTCBCBTTBCSSCCEECCC--CCSSEEEEEECSSCEEEEEEC
T ss_pred             cEEEEEEEeCCChhhhccCCCCcEecCcCcceEEeCCEEEEEECCCEEEEEEeC
Confidence            678899999999999999998765544444478889999999999999999983

>d1qw9a1 b.71.1.2 (A:5-17,A:385-501) Alpha-l-arabinofuranosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51
domain: Alpha-l-arabinofuranosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.91  E-value=1.7e-24  Score=159.71  Aligned_cols=109  Identities=16%  Similarity=0.133  Sum_probs=95.7

Q ss_pred             CCeEEEEEEecCCCC--------ceEEEEEEeccCCCceeeEEEEEEeCC-CCcEEEEEEEccCCCCccccCceEEEEEe
Q 030320           45 GATLLNATLLTNSSS--------SIVASAISWEDSENAKSFLRIKVVNLR-SNSVNLKVSVDGLGPNSIKLSGSTKTQLT  115 (179)
Q Consensus        45 g~~~l~~~~~~~~~~--------~v~~sA~~~~~t~~~~~~l~vk~VN~~-~~~~~v~i~l~g~~~~~~~~~~~~~~~L~  115 (179)
                      |++.|...++||.|.        .|+++|++|++++    +++||+|||+ .++++++|+++|++..    +.+++++|+
T Consensus        13 ~G~~L~~~v~sp~y~~~~~~~vp~lDasAt~d~~~~----~l~v~vVNr~~~e~~~v~i~l~g~~~~----~~~~~~~L~   84 (130)
T d1qw9a1          13 AGVALHPVISSPKYDSKDFTDVPYLESIAVYNEEKE----EVTIFAVNRDMEDALLLECDVRSFEDY----RVIEHIVLE   84 (130)
T ss_dssp             ESEEECCEEECCEECCSSCSSEESEEEEEEEETTTT----EEEEEEEECCSSCCEEEEEECTTSCSC----EEEEEEEEC
T ss_pred             ceEEeeeEecCCceecCCCCCCceEEEEEEEeCCCC----EEEEEEEECCCCcCeEEEEEccCCCcc----ceEEEEEEe
Confidence            578999999988642        4899999998877    4999999999 5579999999998764    577899999


Q ss_pred             cCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEEEEec
Q 030320          116 SSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLR  161 (179)
Q Consensus       116 ~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi~l~~  161 (179)
                      |+++.+.|||++|+.|.|+...+.+.++.++++|||+||+||||++
T Consensus        85 ~~d~~a~NT~~~p~vv~~~~~~~~~~~~~l~~~lPp~S~tvirLkk  130 (130)
T d1qw9a1          85 HDNVKQTNSAQSSPVVPHRNGDAQLSDRKVSATLPKLSWNVIRLGK  130 (130)
T ss_dssp             CSCTTCBCCSSCCCCCCBSCCCCEEETTEEEEEECSSEEEEEEEEC
T ss_pred             CCCccccccCCCCceecCcCcceEEeCCEEEEEECCcEEEEEEEcC
Confidence            9999999999999988777777788899999999999999999974

>d1nofa1 b.71.1.2 (A:31-43,A:321-413) Glycosyl hydrolase family 5 xylanase {Erwinia chrysanthemi [TaxId: 556]}

class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51
domain: Glycosyl hydrolase family 5 xylanase
species: Erwinia chrysanthemi [TaxId: 556]

Probab=97.56  E-value=0.002  Score=43.97  Aligned_cols=92  Identities=22%  Similarity=0.158  Sum_probs=57.7

Q ss_pred             CCeEEEEEEecCCCCceEEEEEEeccCCCceeeEEEEEEeCCCCcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCC
Q 030320           45 GATLLNATLLTNSSSSIVASAISWEDSENAKSFLRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENS  124 (179)
Q Consensus        45 g~~~l~~~~~~~~~~~v~~sA~~~~~t~~~~~~l~vk~VN~~~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt  124 (179)
                      |.+.+.....  +.+.+..||=.+.+ +    .++|=++|.+.+++.++|+|+|++.     ...+ ..++.++   .| 
T Consensus        14 G~~RI~~t~~--~~~~v~vSAy~n~d-g----k~vvV~iN~~~~~~~~~l~l~g~~~-----~~~~-~y~Ts~~---~n-   76 (106)
T d1nofa1          14 GALRIQATEN--PQSNVHLTAYKNTD-G----KMVIVAVNTNDSDQMLSLNISNANV-----TKFE-KYSTSAS---LN-   76 (106)
T ss_dssp             TCEEEEECSC--SBTTEEEEEEECTT-S----CEEEEEEECSSSCEEEEEEEESCCC-----CEEE-EEEESSS---CS-
T ss_pred             ceEEEEcccC--CCCCEEEEEEECCC-C----CEEEEEEcCCCccEEEEEEcCCCce-----EEEE-EEEeCCc---cc-
Confidence            5555544222  22458888865543 2    2889999999999999999998764     3343 3344332   11 


Q ss_pred             CCCCceEeeeeeEEEecCCeeEEEEcCceEEEEEE
Q 030320          125 FTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDL  159 (179)
Q Consensus       125 ~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi~l  159 (179)
                            ..+........++.|+++|||.|++-+..
T Consensus        77 ------l~~~~~~~~~~~g~~~~tlParSVtTfV~  105 (106)
T d1nofa1          77 ------VEYGGSSQVDSSGKATVWLNPLSVTTFVS  105 (106)
T ss_dssp             ------SEEEEEEECCTTSEEEEEECSSEEEEEEE
T ss_pred             ------cccccceeeccCCEEEEEECCceEEEEEc
Confidence                  22222211125789999999999998754

>d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]}

class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: alpha-Amylases, C-terminal beta-sheet domain
domain: Maltogenic amylase
species: Thermoactinomyces vulgaris, TVAI [TaxId: 2026]

Probab=96.60  E-value=0.0034  Score=40.39  Aligned_cols=58  Identities=21%  Similarity=0.052  Sum_probs=37.5

Q ss_pred             EEEEEEeCCCCcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEE
Q 030320           78 LRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSF  157 (179)
Q Consensus        78 l~vk~VN~~~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi  157 (179)
                      -++-++|.++++++++|.+...+..    ......-+-++           +       .+.+.+|.++++|||+|..||
T Consensus        24 ~vlV~~N~s~~~~~v~l~~~~~~~~----~~~~~~dll~g-----------~-------~~~v~~G~l~ltlpp~s~~vL   81 (83)
T d1ji1a2          24 RIAVVLNNDSVSHTVNVPVWQLSMP----NGSTVTDKITG-----------H-------SYTVQNGMVTVAVDGHYGAVL   81 (83)
T ss_dssp             EEEEEEECSSSCEEEEECGGGGTCC----TTCEEEETTTC-----------C-------EEECBTTBEEEEECTTEEEEE
T ss_pred             EEEEEEeCCCCCEEEEecccccccc----cCcEEEEccCC-----------C-------EEEEECCEEEEEECCCEEEEE
Confidence            5777899999999998876432221    12222222111           1       134568899999999999887

>d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]}

class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: alpha-Amylases, C-terminal beta-sheet domain
domain: Maltogenic amylase
species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]

Probab=94.97  E-value=0.041  Score=34.90  Aligned_cols=57  Identities=16%  Similarity=0.134  Sum_probs=37.4

Q ss_pred             EEEEEEeCCCCcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEE
Q 030320           78 LRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSF  157 (179)
Q Consensus        78 l~vk~VN~~~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi  157 (179)
                      -++-++|.+++++.+++.+....      .. ...-+          +.. +.       +.+.+++++++|||++..||
T Consensus        25 ~vlVv~N~s~~~~~v~lp~~~~~------~~-~~~dl----------lsg-~~-------~~~~~g~l~ltL~p~~~~IL   79 (83)
T d1wzla2          25 HVGVVLNNRGEKQTVLLQVPESG------GK-TWLDC----------LTG-EE-------VHGKQGQLKLTLRPYQGMIL   79 (83)
T ss_dssp             EEEEEEECSSSCEEEEEECCGGG------CS-EEEET----------TTC-CE-------EECBTTEEEEEECTTCEEEE
T ss_pred             EEEEEEECCCccEEEEEcCcccc------ce-eeEEc----------cCC-cE-------EEecCCeEEEEECCCEEEEE
Confidence            57778999999999998865422      11 11111          111 11       23467899999999999988


Q ss_pred             EE
Q 030320          158 DL  159 (179)
Q Consensus       158 ~l  159 (179)
                      --
T Consensus        80 ~~   81 (83)
T d1wzla2          80 WN   81 (83)
T ss_dssp             EC
T ss_pred             Ec
Confidence            53

>d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]}

class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: alpha-Amylases, C-terminal beta-sheet domain
domain: Maltogenic amylase
species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]

Probab=94.33  E-value=0.027  Score=35.70  Aligned_cols=55  Identities=16%  Similarity=0.164  Sum_probs=36.7

Q ss_pred             EEEEEEeCCCCcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEE
Q 030320           78 LRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSF  157 (179)
Q Consensus        78 l~vk~VN~~~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi  157 (179)
                      -++-++|.+++++.+++.+.|..       .  .-.++|..                   +...+++++++||||+..|+
T Consensus        24 ~vlVv~N~S~~~~tv~lp~~~~~-------~--~~l~~g~~-------------------~~~~~~~~tltLpp~~~~il   75 (80)
T d1ea9c2          24 TILVVMNNDKAGHTLTLPVRHAQ-------W--THLWQDDV-------------------LTAAHGQLTVKLPAYGFAVL   75 (80)
T ss_dssp             EEEEEEECSSSCEEEEEECCSSS-------C--CEEBSTTC-------------------CEECCCSSEEEEEECSSCCC
T ss_pred             EEEEEEECCCCCEEEEecCCCCe-------E--EEeecCce-------------------eeccCCcEEEEECCccEEEE
Confidence            67788999999988888764321       1  12233211                   12345678999999999998


Q ss_pred             EEe
Q 030320          158 DLL  160 (179)
Q Consensus       158 ~l~  160 (179)
                      +..
T Consensus        76 ~a~   78 (80)
T d1ea9c2          76 KAS   78 (80)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            764

>d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: alpha-Amylases, C-terminal beta-sheet domain
domain: Neopullulanase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.07  E-value=0.081  Score=33.17  Aligned_cols=57  Identities=14%  Similarity=0.373  Sum_probs=36.8

Q ss_pred             EEEEEEeCCCCcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEE
Q 030320           78 LRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSF  157 (179)
Q Consensus        78 l~vk~VN~~~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi  157 (179)
                      -++-++|.+++++++++....        .......|.++           +.+       ....+..+++||||+..++
T Consensus        25 ~vLVv~N~S~~~~~v~lp~~~--------~~~~~~~l~~~-----------~~~-------~~~~~~~~ltL~Py~~~i~   78 (83)
T d1j0ha2          25 TVLVIINRSDQKADIPIPLDA--------RGTWLVNLLTG-----------ERF-------AAEAETLCTSLPPYGFVLY   78 (83)
T ss_dssp             EEEEEEECSSSCEEEECCCCC--------SSEEEEETTTC-----------CEE-------ECCSSSCEEEECTTCEEEE
T ss_pred             EEEEEEeCCCCCEEEEccCcc--------ccCcEEEecCC-----------ccc-------cccCCceEEEECCcEEEEE
Confidence            577789999999887765431        12233333332           111       2234568899999999999


Q ss_pred             EEe
Q 030320          158 DLL  160 (179)
Q Consensus       158 ~l~  160 (179)
                      +++
T Consensus        79 ~~e   81 (83)
T d1j0ha2          79 AIE   81 (83)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            885

>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]}

class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: alpha-Amylases, C-terminal beta-sheet domain
domain: Melibiase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=92.38  E-value=0.22  Score=31.95  Aligned_cols=62  Identities=13%  Similarity=0.194  Sum_probs=41.5

Q ss_pred             EEEEEEeCCCCcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEE
Q 030320           78 LRIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSF  157 (179)
Q Consensus        78 l~vk~VN~~~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi  157 (179)
                      ..|-+.|+++++.++++.+...+..     ....+.+.  |+-.     + ..+       .. .+.+++++|||.+.++
T Consensus        26 ~aVa~~N~~~~~~~~~~~~~~lgl~-----~~~~~~vr--Dlw~-----~-~~~-------g~-~~~~~~~v~pHg~~l~   84 (89)
T d1uasa1          26 KAVVLWNRQSYQATITAHWSNIGLA-----GSVAVTAR--DLWA-----H-SSF-------AA-QGQISASVAPHDCKMY   84 (89)
T ss_dssp             EEEEEEECSSSCEEEEEEGGGTTCC-----TTCEEEEE--ETTT-----T-EEE-------EE-ESEEEEEECTTCEEEE
T ss_pred             EEEEEEeCCCCcEEEEEEHHHcCCC-----CCCcEEEE--ECcC-----C-Ccc-------cc-cceEEEEECCceEEEE
Confidence            7888999999999999999866542     11122222  3332     2 111       11 2479999999999999


Q ss_pred             EEe
Q 030320          158 DLL  160 (179)
Q Consensus       158 ~l~  160 (179)
                      |+.
T Consensus        85 rlt   87 (89)
T d1uasa1          85 VLT   87 (89)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            985

>d1m7xa2 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching enzyme {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: alpha-Amylases, C-terminal beta-sheet domain
domain: 1,4-alpha-glucan branching enzyme
species: Escherichia coli [TaxId: 562]

Probab=91.34  E-value=0.74  Score=30.30  Aligned_cols=73  Identities=7%  Similarity=0.026  Sum_probs=40.9

Q ss_pred             EEEEEEeCCCCc-EEEEEEEccCCCCccccCceEE-EEEecCCCCCC--CCCCCCceEeeeeeEEEecCCeeEEEEcCce
Q 030320           78 LRIKVVNLRSNS-VNLKVSVDGLGPNSIKLSGSTK-TQLTSSNLKDE--NSFTEPNKVVPSLTLLENAAKDMDVVISPYS  153 (179)
Q Consensus        78 l~vk~VN~~~~~-~~v~i~l~g~~~~~~~~~~~~~-~~L~~~d~~a~--Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S  153 (179)
                      -+|.|+|.++.+ ...+|-+..         .++. .+|.+++ ...  ....++..+..+..........++++|||+|
T Consensus        28 ~~vvV~Nfsp~~~~~Y~igvp~---------~G~~~~ilNTD~-~~ygGsg~~~~~~~~~~~~~~~g~~~si~l~lPp~s   97 (106)
T d1m7xa2          28 EIIVASNFTPVPRHDYRFGINQ---------PGKWREILNTDS-MHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLA   97 (106)
T ss_dssp             EEEEEEECSSCCEEEECCBCSS---------CSEEEEEEETTS-TGGGCCCCSCCSCEECBSCCBTTBSCBCCEEECTTE
T ss_pred             EEEEEEeCCCCccCcEEcCCCC---------CCeEEEEEcCCc-cccCCcCcCCCCeEEeeecCcCCcceEEEEEcCCCE
Confidence            468889999876 445554432         2333 4454433 222  2234444444433322233445999999999


Q ss_pred             EEEEEEe
Q 030320          154 FTSFDLL  160 (179)
Q Consensus       154 ~~vi~l~  160 (179)
                      ..+++-+
T Consensus        98 av~~k~~  104 (106)
T d1m7xa2          98 TIWLVRE  104 (106)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEc
Confidence            8888654

>d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]}

class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: alpha-Amylases, C-terminal beta-sheet domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

Probab=87.84  E-value=0.33  Score=32.20  Aligned_cols=63  Identities=6%  Similarity=0.020  Sum_probs=39.8

Q ss_pred             EEEEEeCCCCcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEEEE
Q 030320           79 RIKVVNLRSNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTSFD  158 (179)
Q Consensus        79 ~vk~VN~~~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~vi~  158 (179)
                      .|.+.|+++.++++++++...+..    ... .+.+.  |+-+     +      +  ++... +.++.++|||.+.+||
T Consensus        37 ~V~L~Nr~~~~~tit~~~~~ig~~----~~~-~~~vr--DLWs-----~------~--~lg~~-~~~sa~V~~H~~~~lr   95 (103)
T d1szna1          37 LVLMVNTLDITATKEAKWNEIPGL----SAG-HYEVR--DVWS-----D------K--DLGCL-SSYKAAVAAHDTAVIL   95 (103)
T ss_dssp             EEEEECCSSSCEEEEECGGGSTTC----CSS-EEEEE--ETTT-----T------E--EEEEE-SSEEEEECTTCEEEEE
T ss_pred             EEEEEeCCCCCEeEEEEHHHcCCC----CCC-cEEEE--Eeec-----C------c--ccCcc-ceEEEEECCCcEEEEE
Confidence            367899999999999999765432    111 12222  3322     1      1  11111 3588999999999999


Q ss_pred             Eecc
Q 030320          159 LLRE  162 (179)
Q Consensus       159 l~~~  162 (179)
                      |...
T Consensus        96 lt~~   99 (103)
T d1szna1          96 VGKK   99 (103)
T ss_dssp             EEEE
T ss_pred             Eccc
Confidence            9754

>d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: alpha-Amylases, C-terminal beta-sheet domain
domain: Melibiase
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=87.32  E-value=2.3  Score=27.15  Aligned_cols=67  Identities=12%  Similarity=0.174  Sum_probs=42.0

Q ss_pred             EEEEEEeCC-CCcEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceEEE
Q 030320           78 LRIKVVNLR-SNSVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSFTS  156 (179)
Q Consensus        78 l~vk~VN~~-~~~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~~v  156 (179)
                      ..|-+.|+. +.+.++++.+..++..     ....+.+.  |+     +.+-+ +     ..--.++.|++.+||+.+.+
T Consensus        27 ~Ava~~N~~~~~p~~~~~~~~~lgl~-----~~~~~~vr--Dl-----w~~~~-l-----g~~~~~~~~tv~V~phGv~~   88 (95)
T d1ktba1          27 SALVFFSRRTDMPFRYTTSLAKLGFP-----MGAAYEVQ--DV-----YSGKI-I-----SGLKTGDNFTVIINPSGVVM   88 (95)
T ss_dssp             EEEEEEECCSSSCEEEEEEHHHHTCC-----TTCEEEEE--ET-----TTCCE-E-----EEEETTSEEEEEECTTCEEE
T ss_pred             EEEEEEECCCCccEEEEEEHHHcCCC-----CCCceEEE--Ec-----cCCCc-c-----ceeccCCeEEEEECCCeEEE
Confidence            788899985 5578999999765542     22223332  33     22211 1     11113568999999999999


Q ss_pred             EEEecc
Q 030320          157 FDLLRE  162 (179)
Q Consensus       157 i~l~~~  162 (179)
                      +|+...
T Consensus        89 ~r~~P~   94 (95)
T d1ktba1          89 WYLCPK   94 (95)
T ss_dssp             EEEEEC
T ss_pred             EEEEeC
Confidence            998643

>d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Glycosyl hydrolase domain
superfamily: Glycosyl hydrolase domain
family: alpha-Amylases, C-terminal beta-sheet domain
domain: Melibiase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.37  E-value=3.5  Score=26.30  Aligned_cols=70  Identities=13%  Similarity=0.097  Sum_probs=40.9

Q ss_pred             eEEEEEEeCCCC--cEEEEEEEccCCCCccccCceEEEEEecCCCCCCCCCCCCceEeeeeeEEEecCCeeEEEEcCceE
Q 030320           77 FLRIKVVNLRSN--SVNLKVSVDGLGPNSIKLSGSTKTQLTSSNLKDENSFTEPNKVVPSLTLLENAAKDMDVVISPYSF  154 (179)
Q Consensus        77 ~l~vk~VN~~~~--~~~v~i~l~g~~~~~~~~~~~~~~~L~~~d~~a~Nt~~~P~~V~P~~~~~~~~~~~~~~~lp~~S~  154 (179)
                      ...|-+.|+.++  +..+++.+..++....  .....+.+.  |+.......   ..       . .++.++..+|||.+
T Consensus        25 ~~Ava~~N~~~~~~p~~~~~~~~~lg~~~~--~~~~~y~vr--DLw~~~~lG---~~-------~-~~~~~~~~V~PhGv   89 (98)
T d1r46a1          25 AWAVAMINRQEIGGPRSYTIAVASLGKGVA--CNPACFITQ--LLPVKRKLG---FY-------E-WTSRLRSHINPTGT   89 (98)
T ss_dssp             EEEEEEEECCCSSSCEEEEEESTTTBTTTB--TSSEEECEE--EESSCCCCC---EE-------E-SSCEEEEEECTTCE
T ss_pred             CEEEEEEEccCCCccEEEEEEHHHcCCccc--cCCCceEEE--EccCCcccc---eE-------c-cCCeEEEEECCceE
Confidence            388999999754  5778888765442100  112223331  333222111   11       1 24578999999999


Q ss_pred             EEEEEec
Q 030320          155 TSFDLLR  161 (179)
Q Consensus       155 ~vi~l~~  161 (179)
                      .++|++.
T Consensus        90 ~~lr~~~   96 (98)
T d1r46a1          90 VLLQLEN   96 (98)
T ss_dssp             EEEEEEB
T ss_pred             EEEEEEc
Confidence            9999975