Citrus Sinensis ID: 030405

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQLI
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHcccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHcccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccccHHHHHHHHHHccccccEEEHHHHHHHHHcccccccHHHHHHHHHHHEcccccccEcHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MVQCLDGLKHFCVVVVNccdadlykqprgledpealarETVFSVSEIEALYELFKKISSAviddglinkEEFQLALFKTnkkeslfadrvfdlfdtkhngilDFEEFARALsifhpnspiddkieFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQLI
Flexible Loop (DISEMBL)
MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTEsgmnlsddviESIIDKVLSLIQLI
Low Complexity Region (SEG)
MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQLI
Disordered region (IsUnstruct)
**QCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQ**
Disordered Region (DISOPRED)
**QCLDGLKHFCVVVVNC*****************LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQLI
Disordered Region (DISEMBL)
MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQLI
Disordered Region (DISPRO)
MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQLI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQLI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	178	2.2.26 [Sep-21-2011]
Q75LU8	225	Calcineurin B-like protei	yes	no	0.955	0.755	0.865	3e-82
Q8LAS7	226	Calcineurin B-like protei	yes	no	0.960	0.756	0.854	4e-81
Q8LEM7	226	Calcineurin B-like protei	no	no	0.966	0.761	0.848	1e-80
Q3HRP5	225	Calcineurin B-like protei	no	no	0.960	0.76	0.831	6e-80
Q3HRP1	226	Calcineurin B-like protei	no	no	0.966	0.761	0.761	2e-74
Q9C5P6	226	Calcineurin B-like protei	no	no	0.921	0.725	0.684	2e-62
Q7XC27	213	Calcineurin B-like protei	no	no	0.870	0.727	0.634	2e-53
O81445	213	Calcineurin B-like protei	no	no	0.882	0.737	0.592	7e-51
O81223	222	Calcineurin B-like protei	no	no	0.825	0.662	0.598	1e-49
Q9LTB8	213	Calcineurin B-like protei	no	no	0.797	0.666	0.640	6e-49

>sp|Q75LU8|CNBL3_ORYSJ Calcineurin B-like protein 3 OS=Oryza sativa subsp. japonica GN=CBL3 PE=1 SV=1

 Score =  303 bits (776), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 148/171 (86%), Positives = 161/171 (94%), Gaps = 1/171 (0%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           M+QCL+G+K  C V++ CCD DL KQP+GLEDPE LARETVFSVSE+EALYELFKKISSA
Sbjct: 1   MLQCLEGVKQLCGVLLKCCDLDL-KQPKGLEDPEILARETVFSVSEVEALYELFKKISSA 59

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL FEEFARALS+FHPN+P+
Sbjct: 60  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPL 119

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV 171
           D+KI+FSFQLYDLKQQGFIERQEVKQMVVATL ESGMNLSD+VIESIIDK 
Sbjct: 120 DEKIDFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDEVIESIIDKT 170

Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8LAS7|CNBL2_ARATH Calcineurin B-like protein 2 OS=Arabidopsis thaliana GN=CBL2 PE=1 SV=2

 Score =  300 bits (767), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 147/172 (85%), Positives = 153/172 (88%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           M QC+DG+KH C  V+ C D DLYKQ  GL DPE LAR+TVFSVSEIEALYELFKKISSA
Sbjct: 1   MSQCVDGIKHLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSA 60

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL FEEFARALS+FHPN+PI
Sbjct: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPI 120

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           DDKI FSFQLYDLKQQGFIERQEVKQMVVATL ESGMNL D VIE IIDK  
Sbjct: 121 DDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTF 172

Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner. Binds two calcium ions per subunit. Mediates the activation of AKT1 by CIPK proteins (CIPK6, CIPK16, and CIPK23) in response to low potassium conditions and in the context of stomatal movement.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LEM7|CNBL3_ARATH Calcineurin B-like protein 3 OS=Arabidopsis thaliana GN=CBL3 PE=1 SV=2

 Score =  298 bits (764), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 146/172 (84%), Positives = 154/172 (89%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           M QC+DG KH C     C D D+YKQ  GL DPE LARETVFSVSEIEALYELFKKISSA
Sbjct: 1   MSQCIDGFKHVCSSFFRCFDIDIYKQSGGLGDPELLARETVFSVSEIEALYELFKKISSA 60

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL FEEFARALS+FHPN+PI
Sbjct: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPI 120

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           +DKI+FSFQLYDLKQQGFIERQEVKQMVVATL ESGMNLSD++IESIIDK  
Sbjct: 121 EDKIDFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDEIIESIIDKTF 172

Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner. Mediates the activation of AKT1 by CIPK proteins (CIPK6, CIPK16, and CIPK23) in response to low potassium conditions and in the context of stomatal movement.

Arabidopsis thaliana (taxid: 3702)

>sp|Q3HRP5|CNBL2_ORYSJ Calcineurin B-like protein 2 OS=Oryza sativa subsp. japonica GN=CBL2 PE=2 SV=1

 Score =  296 bits (757), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 143/172 (83%), Positives = 159/172 (92%), Gaps = 1/172 (0%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           MVQCLDG++    VV  CCD +L KQPRGLEDP+ LARETVFSVSE+EALYELFKKISSA
Sbjct: 1   MVQCLDGVRQLLAVVFKCCDLEL-KQPRGLEDPQVLARETVFSVSEVEALYELFKKISSA 59

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINKEEFQLALFKT+KKESLFADRVFDLFDTKHNGIL F+EFARALS+FHP++P+
Sbjct: 60  VIDDGLINKEEFQLALFKTSKKESLFADRVFDLFDTKHNGILGFDEFARALSVFHPSAPL 119

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           D+KI+FSFQLYDLKQQG+IERQEVKQMVVATL ESGMNLSD++IESIIDK  
Sbjct: 120 DEKIDFSFQLYDLKQQGYIERQEVKQMVVATLAESGMNLSDEIIESIIDKTF 171

Acts as a calcium sensor. May promote vacuolation of aleurone cells in response to signal induced by gibberellin. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q3HRP1|CNBL6_ORYSJ Calcineurin B-like protein 6 OS=Oryza sativa subsp. japonica GN=CBL6 PE=2 SV=1

 Score =  278 bits (710), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 131/172 (76%), Positives = 151/172 (87%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           MV   +GL+    ++  CC  D   +P GL+DPE LARETVF+V+EIEALYELFKKISSA
Sbjct: 1   MVDSSEGLRRLAALLFKCCSLDSSNRPNGLQDPERLARETVFNVNEIEALYELFKKISSA 60

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           V+DDGLINKEEFQLALFKTN+K+S+FADRVFDLFDTKHNGIL FEEFARALS+FHPN+PI
Sbjct: 61  VVDDGLINKEEFQLALFKTNRKDSMFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPI 120

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           DDKI+F+F+LYDLKQQGFIE+QEVKQMVVATL ESGMNLSD++IE IIDK  
Sbjct: 121 DDKIDFAFKLYDLKQQGFIEKQEVKQMVVATLAESGMNLSDEIIEGIIDKTF 172

Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C5P6|CNBL6_ARATH Calcineurin B-like protein 6 OS=Arabidopsis thaliana GN=CBL6 PE=2 SV=2

 Score =  238 bits (607), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 117/171 (68%), Positives = 140/171 (81%), Gaps = 7/171 (4%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           M+QCLDGLKH  ++++ CCDAD    P+  ++P+ +AR TVF+V+EIEALYELFK IS  
Sbjct: 2   MMQCLDGLKHLALILLTCCDAD---PPKVRQNPKDVARGTVFTVNEIEALYELFKSISK- 57

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
              +GLI+KE+FQL LFK N   SLFADRVFDLFDTK+ GILDFE FAR+LS+FHPN+  
Sbjct: 58  ---NGLIDKEQFQLVLFKMNTTRSLFADRVFDLFDTKNTGILDFEAFARSLSVFHPNAKF 114

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV 171
           +DKIEFSF+LYDL QQG+I+RQEVKQMVV TL ESGMNLSD VIESIIDK 
Sbjct: 115 EDKIEFSFKLYDLNQQGYIKRQEVKQMVVRTLAESGMNLSDHVIESIIDKT 165

Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7XC27|CNBL1_ORYSJ Calcineurin B-like protein 1 OS=Oryza sativa subsp. japonica GN=CBL1 PE=2 SV=2

 Score =  207 bits (528), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 99/156 (63%), Positives = 126/156 (80%), Gaps = 1/156 (0%)

Query: 19  CDADLYKQPR-GLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALF 77
           C     ++PR G EDP  LA ET FSVSE+EAL+ELFK IS +VIDDGLINKEEFQLALF
Sbjct: 3   CFQSTARRPRPGYEDPVGLASETAFSVSEVEALFELFKSISGSVIDDGLINKEEFQLALF 62

Query: 78  KTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQG 137
           K  +KE+LFA+R+FDLFD K  G++DF +F RAL++FHPN P+++KI+FSF+LYD+   G
Sbjct: 63  KNKRKENLFANRIFDLFDVKKRGVIDFGDFVRALNVFHPNIPMEEKIDFSFKLYDMDNTG 122

Query: 138 FIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLS 173
           FIER+EVKQM++A L ES M LSD++IE+I+DK  S
Sbjct: 123 FIERKEVKQMLIALLGESEMRLSDEIIETILDKTFS 158

Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|O81445|CNBL1_ARATH Calcineurin B-like protein 1 OS=Arabidopsis thaliana GN=CBL1 PE=1 SV=3

 Score =  199 bits (506), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 93/157 (59%), Positives = 126/157 (80%)

Query: 16  VNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLA 75
           + C  +   K+ RG EDP  LA ET FSVSE+EAL+ELFK ISS+V+DDGLINKEEFQLA
Sbjct: 1   MGCFHSKAAKEFRGHEDPVKLASETAFSVSEVEALFELFKSISSSVVDDGLINKEEFQLA 60

Query: 76  LFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQ 135
           LFK+ K+E++FA+R+FD+FD K  G++DF +F R+L++FHPN+ ++DKI+F+F+LYD+  
Sbjct: 61  LFKSRKRENIFANRIFDMFDVKRKGVIDFGDFVRSLNVFHPNASLEDKIDFTFRLYDMDC 120

Query: 136 QGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
            G+IERQEVKQM++A L ES M L+D+ IE I+DK  
Sbjct: 121 TGYIERQEVKQMLIALLCESEMKLADETIEIILDKTF 157

Acts as a calcium sensor involved in the signaling pathway during growth and development and in response to abiotic stresses. May function as a positive regulator of salt and drought responses and as a negative regulator of cold response. Contributes to the regulation of early stress-related CBF/DREB transcription factors. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner. Mediates the activation of AKT1 by CIPK proteins (CIPK6, CIPK16, and CIPK23) in response to low potassium conditions and in the context of stomatal movement.

Arabidopsis thaliana (taxid: 3702)

>sp|O81223|CNBL4_ARATH Calcineurin B-like protein 4 OS=Arabidopsis thaliana GN=CBL4 PE=1 SV=3

 Score =  195 bits (495), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 88/147 (59%), Positives = 122/147 (82%)

Query: 26  QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL 85
           +P G EDPE LA  T F+V E+EALYELFKK+SS++IDDGLI+KEEFQLALF+   + +L
Sbjct: 15  RPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNL 74

Query: 86  FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 145
           FADR+FD+FD K NG+++F EF R+L +FHP++P+ +K++F+F+LYDL+Q GFIER+E+K
Sbjct: 75  FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELK 134

Query: 146 QMVVATLTESGMNLSDDVIESIIDKVL 172
           +MVVA L ES + LS+D+IE ++DK  
Sbjct: 135 EMVVALLHESELVLSEDMIEVMVDKAF 161

Acts as a calcium sensor involved in the regulatory pathway for the control of intracellular Na(+) and K(+) homeostasis and salt tolerance. Operates in synergy with CIPK24/SOS2 to activate the plasma membrane Na(+)/H(+) antiporter SOS1. May function as positive regulator of salt stress responses. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LTB8|CNBL9_ARATH Calcineurin B-like protein 9 OS=Arabidopsis thaliana GN=CBL9 PE=1 SV=3

 Score =  193 bits (490), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 91/142 (64%), Positives = 117/142 (82%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRV 90
           E+P  LA ET FSVSE+EALYELFK ISS+V+DDGLINKEEFQLALFK  KKE+LFA+R+
Sbjct: 16  ENPVKLASETAFSVSEVEALYELFKSISSSVVDDGLINKEEFQLALFKNRKKENLFANRI 75

Query: 91  FDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
           FDLFD K  G++DF +F R+L++FHPN+ +++K +F+F+LYD+   GFIERQEVKQM++A
Sbjct: 76  FDLFDVKRKGVIDFGDFVRSLNVFHPNASLEEKTDFTFRLYDMDCTGFIERQEVKQMLIA 135

Query: 151 TLTESGMNLSDDVIESIIDKVL 172
            L ES M L+DD IE I+D+  
Sbjct: 136 LLCESEMKLADDTIEMILDQTF 157

Acts as a calcium sensor involved in abscisic acid (ABA) signaling and stress-induced ABA biosynthesis pathways. May function as a negative regulator of stress and ABA responses. Contributes to the regulation of early stress-related CBF/DREB transcription factors. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner. Mediates the activation of AKT1 by CIPK proteins (CIPK6, CIPK16, and CIPK23) in response to low potassium conditions and in the context of stomatal movement.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
147770306	226	hypothetical protein VITISV_029390 [Viti	0.966	0.761	0.924	6e-89
166788449	226	calcineurin B-like protein [Phaseolus vu	0.966	0.761	0.918	1e-87
449434060	226	PREDICTED: calcineurin B-like protein 3-	0.966	0.761	0.906	2e-87
449491221	226	PREDICTED: LOW QUALITY PROTEIN: calcineu	0.966	0.761	0.901	3e-87
356522091	226	PREDICTED: calcineurin B-like protein 3-	0.966	0.761	0.912	5e-87
363807678	226	uncharacterized protein LOC100791045 [Gl	0.966	0.761	0.912	2e-86
224089529	226	predicted protein [Populus trichocarpa]	0.966	0.761	0.901	4e-86
255568116	224	calcineurin B, putative [Ricinus communi	0.955	0.758	0.918	4e-86
115531880	226	calcineurin B-like protein 3 [Populus eu	0.966	0.761	0.895	2e-85
388539505	226	calcineurin B-like protein 2 [Lilium lon	0.966	0.761	0.883	4e-84

>gi|147770306|emb|CAN62487.1| hypothetical protein VITISV_029390 [Vitis vinifera] gi|229609883|gb|ACQ83557.1| calcineurin B-like protein 03 [Vitis vinifera]

 Score =  331 bits (849), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 159/172 (92%), Positives = 167/172 (97%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           M+QCL+G+KH C VVVNCCDADLYKQP+GLEDPEALARETVFSVSEIEALYELFKKISSA
Sbjct: 1   MLQCLEGVKHLCAVVVNCCDADLYKQPKGLEDPEALARETVFSVSEIEALYELFKKISSA 60

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALS+FHPN+PI
Sbjct: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSVFHPNAPI 120

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           +DKI+FSFQLYDLKQQGFIERQEVKQMVVATL ESGMNLSDDVIESIIDK  
Sbjct: 121 EDKIDFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIESIIDKTF 172

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|166788449|dbj|BAG06680.1| calcineurin B-like protein [Phaseolus vulgaris]

 Score =  327 bits (838), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 158/172 (91%), Positives = 163/172 (94%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           MVQCLDGLKH C  +VNCCDAD  KQPRGLE+PE LARETVFSVSEIEALYELFKKISSA
Sbjct: 1   MVQCLDGLKHLCAALVNCCDADSSKQPRGLENPELLARETVFSVSEIEALYELFKKISSA 60

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALS+FHPN+PI
Sbjct: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSVFHPNAPI 120

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           DDKIEFSFQLYDLKQQGFIERQEVKQMVVATL ESGMNLSDDV+ESIIDK  
Sbjct: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVVESIIDKTF 172

Source: Phaseolus vulgaris

Species: Phaseolus vulgaris

Genus: Phaseolus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434060|ref|XP_004134814.1| PREDICTED: calcineurin B-like protein 3-like [Cucumis sativus]

 Score =  327 bits (837), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 156/172 (90%), Positives = 164/172 (95%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           MVQCL+G+KHFC  + NCCDAD  +QPRGL+DPEALARETVFSVSEIEALYELFKKISSA
Sbjct: 1   MVQCLEGIKHFCASIANCCDADTSRQPRGLQDPEALARETVFSVSEIEALYELFKKISSA 60

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINK+EFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALS+FHPN+PI
Sbjct: 61  VIDDGLINKDEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSVFHPNAPI 120

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           DDKIEFSFQLYDLKQQGFIERQEVKQMVVATL ESGMNLSDDVIESIIDK  
Sbjct: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIESIIDKTF 172

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449491221|ref|XP_004158833.1| PREDICTED: LOW QUALITY PROTEIN: calcineurin B-like protein 3-like [Cucumis sativus]

 Score =  325 bits (834), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 155/172 (90%), Positives = 164/172 (95%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           MVQCL+G+KHFC  + NCCDAD  +QPRGL+DPEALARETVFSVSEIEALYELFKKISSA
Sbjct: 1   MVQCLEGIKHFCASIANCCDADTSRQPRGLQDPEALARETVFSVSEIEALYELFKKISSA 60

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINK+EFQLAL+KTNKKESLFADRVFDLFDTKHNGILDFEEFARALS+FHPN+PI
Sbjct: 61  VIDDGLINKDEFQLALYKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSVFHPNAPI 120

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           DDKIEFSFQLYDLKQQGFIERQEVKQMVVATL ESGMNLSDDVIESIIDK  
Sbjct: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIESIIDKTF 172

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522091|ref|XP_003529683.1| PREDICTED: calcineurin B-like protein 3-like [Glycine max]

 Score =  325 bits (833), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 157/172 (91%), Positives = 162/172 (94%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           MVQCLDGLKH C  ++NCCDAD  KQP GLE+PE LARETVFSVSEIEALYELFKKISSA
Sbjct: 1   MVQCLDGLKHLCAALINCCDADSSKQPTGLENPEVLARETVFSVSEIEALYELFKKISSA 60

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALS+FHPN+PI
Sbjct: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSVFHPNAPI 120

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           DDKIEFSFQLYDLKQQGFIERQEVKQMVVATL ESGMNLSDDVIESIIDK  
Sbjct: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIESIIDKTF 172

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807678|ref|NP_001241908.1| uncharacterized protein LOC100791045 [Glycine max] gi|255641958|gb|ACU21246.1| unknown [Glycine max]

 Score =  323 bits (827), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 157/172 (91%), Positives = 161/172 (93%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           MVQCLDGLKH C  +VNCCDAD  KQP GLE+PE LARETVFSVSEIEALYELFKKISSA
Sbjct: 1   MVQCLDGLKHLCAALVNCCDADSSKQPTGLENPEVLARETVFSVSEIEALYELFKKISSA 60

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALS+FHPN+PI
Sbjct: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSVFHPNAPI 120

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           DDKIEFSFQLYDLKQ GFIERQEVKQMVVATL ESGMNLSDDVIESIIDK  
Sbjct: 121 DDKIEFSFQLYDLKQPGFIERQEVKQMVVATLAESGMNLSDDVIESIIDKTF 172

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089529|ref|XP_002308747.1| predicted protein [Populus trichocarpa] gi|133925833|gb|ABO43669.1| calcineurin B-like protein 3 [Populus trichocarpa] gi|222854723|gb|EEE92270.1| predicted protein [Populus trichocarpa]

 Score =  322 bits (825), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 155/172 (90%), Positives = 162/172 (94%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           M QCLD +KHFC  V +CCDADLYKQ +GLEDPEALARETVFSVSEIEALYELFKKISSA
Sbjct: 1   MAQCLDRIKHFCAAVASCCDADLYKQNKGLEDPEALARETVFSVSEIEALYELFKKISSA 60

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINKEEFQLALFKTNKK+SLFADRVFDLFDTKHNGILDFEEFAR+LS+FHPN+PI
Sbjct: 61  VIDDGLINKEEFQLALFKTNKKDSLFADRVFDLFDTKHNGILDFEEFARSLSVFHPNAPI 120

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           DDKIEFSFQLYDLKQQG IERQEVKQMVVATL ESGMNLSDDVIESIIDK  
Sbjct: 121 DDKIEFSFQLYDLKQQGLIERQEVKQMVVATLAESGMNLSDDVIESIIDKTF 172

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568116|ref|XP_002525034.1| calcineurin B, putative [Ricinus communis] gi|223535696|gb|EEF37361.1| calcineurin B, putative [Ricinus communis]

 Score =  322 bits (824), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 158/172 (91%), Positives = 161/172 (93%), Gaps = 2/172 (1%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           MVQCLDGLKH C  V NCCDAD  KQPR LEDPEALARETVFSVSEIEALYELFKKISSA
Sbjct: 1   MVQCLDGLKHLCAAVANCCDAD--KQPRDLEDPEALARETVFSVSEIEALYELFKKISSA 58

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALS+FHPN+PI
Sbjct: 59  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSVFHPNAPI 118

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           DDKIEFSFQLYDLKQQGFIERQEVKQMVV TL ESGMNLSDD+IESIIDK  
Sbjct: 119 DDKIEFSFQLYDLKQQGFIERQEVKQMVVVTLAESGMNLSDDIIESIIDKTF 170

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115531880|gb|ABJ09706.1| calcineurin B-like protein 3 [Populus euphratica]

 Score =  320 bits (819), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 154/172 (89%), Positives = 162/172 (94%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           M QCLD +KHFC  V +CCDADLYKQ +GLEDPEALARETVFSVSEIEALYELFKKISSA
Sbjct: 1   MAQCLDRIKHFCAAVSSCCDADLYKQNKGLEDPEALARETVFSVSEIEALYELFKKISSA 60

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINKEEFQLALFKTNKK+SLFADRVFDLFDTKHNGILDF+EFAR+LS+FHPN+PI
Sbjct: 61  VIDDGLINKEEFQLALFKTNKKDSLFADRVFDLFDTKHNGILDFKEFARSLSVFHPNAPI 120

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           DDKIEFSFQLYDLKQQG IERQEVKQMVVATL ESGMNLSDDVIESIIDK  
Sbjct: 121 DDKIEFSFQLYDLKQQGLIERQEVKQMVVATLAESGMNLSDDVIESIIDKTF 172

Source: Populus euphratica

Species: Populus euphratica

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388539505|gb|AFK64728.1| calcineurin B-like protein 2 [Lilium longiflorum]

 Score =  315 bits (807), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 152/172 (88%), Positives = 162/172 (94%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           M+QCLDG+KHFC V++ CC+ D+Y Q +GLEDPE LARETVFSVSEIEALYELFKKISSA
Sbjct: 1   MLQCLDGVKHFCGVLLKCCEIDIYNQAKGLEDPELLARETVFSVSEIEALYELFKKISSA 60

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL FEEFARALS+FHPN+PI
Sbjct: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPI 120

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           DDKI+FSFQLYDLKQQGFIERQEVKQMVVATL ESGMNLSDDVIESIIDK  
Sbjct: 121 DDKIQFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIESIIDKTF 172

Source: Lilium longiflorum

Species: Lilium longiflorum

Genus: Lilium

Family: Liliaceae

Order: Liliales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
UNIPROTKB|Q8L7F6	225	CnB "Calcineurin B-like protei	0.949	0.751	0.888	1e-75
TAIR|locus:2161760	226	CBL2 "AT5G55990" [Arabidopsis	0.955	0.752	0.864	3.1e-74
TAIR|locus:2130499	226	CBL6 "calcineurin B-like prote	0.915	0.721	0.688	2.8e-57
TAIR|locus:2129306	213	CBL1 "calcineurin B-like prote	0.870	0.727	0.6	1.8e-48
TAIR|locus:2169794	222	SOS3 "SALT OVERLY SENSITIVE 3"	0.814	0.653	0.606	5.4e-47
TAIR|locus:2152012	213	CBL9 "calcineurin B-like prote	0.786	0.657	0.65	6.9e-47
TAIR|locus:2123767	256	CBL10 "AT4G33000" [Arabidopsis	0.797	0.554	0.619	7.3e-43
TAIR|locus:2019439	214	CBL8 "calcineurin B-like prote	0.882	0.733	0.528	1.6e-40
TAIR|locus:2133857	214	CBL7 "calcineurin B-like prote	0.691	0.574	0.632	3.3e-40
TAIR|locus:2125162	203	CBL5 "calcineurin B-like prote	0.859	0.753	0.461	1.1e-32

UNIPROTKB|Q8L7F6 CnB "Calcineurin B-like protein" [Pisum sativum (taxid:3888)]

 Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
 Identities = 151/170 (88%), Positives = 157/170 (92%)

Query:     1 MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
             M+QCL+G K     V+ CCD D+  QPRGLEDPE LARETVFSVSEIEALYELFKKISSA
Sbjct:     1 MLQCLEGFKSLLASVLRCCDIDI-NQPRGLEDPELLARETVFSVSEIEALYELFKKISSA 59

Query:    61 VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
             VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL FEEFARALS+FHPN+PI
Sbjct:    60 VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPI 119

Query:   121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK 170
             DDKIEFSFQLYDLKQQGFIERQEVKQMVVATL ESGMNLSDDVIESIIDK
Sbjct:   120 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIESIIDK 169

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2161760 CBL2 "AT5G55990" [Arabidopsis thaliana (taxid:3702)]

 Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
 Identities = 147/170 (86%), Positives = 153/170 (90%)

Query:     1 MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
             M QC+DG+KH C  V+ C D DLYKQ  GL DPE LAR+TVFSVSEIEALYELFKKISSA
Sbjct:     1 MSQCVDGIKHLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSA 60

Query:    61 VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
             VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL FEEFARALS+FHPN+PI
Sbjct:    61 VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPI 120

Query:   121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK 170
             DDKI FSFQLYDLKQQGFIERQEVKQMVVATL ESGMNL D VIE IIDK
Sbjct:   121 DDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDK 170

GO:0005509 "calcium ion binding" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0019722 "calcium-mediated signaling" evidence=RCA;TAS

GO:0005773 "vacuole" evidence=IDA

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010118 "stomatal movement" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0055075 "potassium ion homeostasis" evidence=IMP

TAIR|locus:2130499 CBL6 "calcineurin B-like protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
 Identities = 117/170 (68%), Positives = 140/170 (82%)

Query:     1 MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
             M+QCLDGLKH  ++++ CCDAD    P+  ++P+ +AR TVF+V+EIEALYELFK IS  
Sbjct:     2 MMQCLDGLKHLALILLTCCDAD---PPKVRQNPKDVARGTVFTVNEIEALYELFKSISK- 57

Query:    61 VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
                +GLI+KE+FQL LFK N   SLFADRVFDLFDTK+ GILDFE FAR+LS+FHPN+  
Sbjct:    58 ---NGLIDKEQFQLVLFKMNTTRSLFADRVFDLFDTKNTGILDFEAFARSLSVFHPNAKF 114

Query:   121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK 170
             +DKIEFSF+LYDL QQG+I+RQEVKQMVV TL ESGMNLSD VIESIIDK
Sbjct:   115 EDKIEFSFKLYDLNQQGYIKRQEVKQMVVRTLAESGMNLSDHVIESIIDK 164

GO:0005509 "calcium ion binding" evidence=IEA;ISS

GO:0019722 "calcium-mediated signaling" evidence=ISS;RCA

TAIR|locus:2129306 CBL1 "calcineurin B-like protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 93/155 (60%), Positives = 126/155 (81%)

Query:    16 VNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLA 75
             + C  +   K+ RG EDP  LA ET FSVSE+EAL+ELFK ISS+V+DDGLINKEEFQLA
Sbjct:     1 MGCFHSKAAKEFRGHEDPVKLASETAFSVSEVEALFELFKSISSSVVDDGLINKEEFQLA 60

Query:    76 LFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQ 135
             LFK+ K+E++FA+R+FD+FD K  G++DF +F R+L++FHPN+ ++DKI+F+F+LYD+  
Sbjct:    61 LFKSRKRENIFANRIFDMFDVKRKGVIDFGDFVRSLNVFHPNASLEDKIDFTFRLYDMDC 120

Query:   136 QGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK 170
              G+IERQEVKQM++A L ES M L+D+ IE I+DK
Sbjct:   121 TGYIERQEVKQMLIALLCESEMKLADETIEIILDK 155

GO:0005509 "calcium ion binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006970 "response to osmotic stress" evidence=IMP;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0019722 "calcium-mediated signaling" evidence=RCA;TAS

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0009651 "response to salt stress" evidence=IEP;IMP

GO:0019900 "kinase binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0010107 "potassium ion import" evidence=IGI

GO:0010118 "stomatal movement" evidence=IGI

GO:0005737 "cytoplasm" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0052542 "defense response by callose deposition" evidence=RCA

TAIR|locus:2169794 SOS3 "SALT OVERLY SENSITIVE 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 88/145 (60%), Positives = 122/145 (84%)

Query:    26 QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL 85
             +P G EDPE LA  T F+V E+EALYELFKK+SS++IDDGLI+KEEFQLALF+   + +L
Sbjct:    15 RPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNL 74

Query:    86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 145
             FADR+FD+FD K NG+++F EF R+L +FHP++P+ +K++F+F+LYDL+Q GFIER+E+K
Sbjct:    75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELK 134

Query:   146 QMVVATLTESGMNLSDDVIESIIDK 170
             +MVVA L ES + LS+D+IE ++DK
Sbjct:   135 EMVVALLHESELVLSEDMIEVMVDK 159

GO:0005509 "calcium ion binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0010118 "stomatal movement" evidence=RCA

GO:0019722 "calcium-mediated signaling" evidence=RCA

GO:0005513 "detection of calcium ion" evidence=IMP

GO:0030007 "cellular potassium ion homeostasis" evidence=IMP

GO:0042539 "hypotonic salinity response" evidence=IMP

GO:0004723 "calcium-dependent protein serine/threonine phosphatase activity" evidence=ISS

GO:0005955 "calcineurin complex" evidence=ISS

TAIR|locus:2152012 CBL9 "calcineurin B-like protein 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 91/140 (65%), Positives = 117/140 (83%)

Query:    31 EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRV 90
             E+P  LA ET FSVSE+EALYELFK ISS+V+DDGLINKEEFQLALFK  KKE+LFA+R+
Sbjct:    16 ENPVKLASETAFSVSEVEALYELFKSISSSVVDDGLINKEEFQLALFKNRKKENLFANRI 75

Query:    91 FDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
             FDLFD K  G++DF +F R+L++FHPN+ +++K +F+F+LYD+   GFIERQEVKQM++A
Sbjct:    76 FDLFDVKRKGVIDFGDFVRSLNVFHPNASLEEKTDFTFRLYDMDCTGFIERQEVKQMLIA 135

Query:   151 TLTESGMNLSDDVIESIIDK 170
              L ES M L+DD IE I+D+
Sbjct:   136 LLCESEMKLADDTIEMILDQ 155

GO:0005509 "calcium ion binding" evidence=IEA;ISS;IDA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008287 "protein serine/threonine phosphatase complex" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=IMP

GO:0010107 "potassium ion import" evidence=IGI

GO:0010118 "stomatal movement" evidence=IGI;RCA

GO:0005737 "cytoplasm" evidence=IDA

GO:0019722 "calcium-mediated signaling" evidence=RCA

TAIR|locus:2123767 CBL10 "AT4G33000" [Arabidopsis thaliana (taxid:3702)]

 Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
 Identities = 88/142 (61%), Positives = 114/142 (80%)

Query:    32 DPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF 91
             D E LARE+ FSV+E+EALYELFKK+S ++IDDGLI+KEE +LALF+    E+LF DRVF
Sbjct:    63 DLERLARESQFSVNEVEALYELFKKLSCSIIDDGLIHKEELRLALFQAPYGENLFLDRVF 122

Query:    92 DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT 151
             DLFD K NG+++FEEF  ALS+FHP + I +K +F+F+LYDL+Q GFIER+EV+QMV A 
Sbjct:   123 DLFDEKKNGVIEFEEFIHALSVFHPYASIQEKTDFAFRLYDLRQTGFIEREEVQQMVSAI 182

Query:   152 LTESGMNLSDDVIESIIDKVLS 173
             L ES M LSD+++  IIDK  +
Sbjct:   183 LLESDMMLSDELLTMIIDKTFA 204

GO:0005509 "calcium ion binding" evidence=ISS;IDA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009507 "chloroplast" evidence=ISM

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0042538 "hyperosmotic salinity response" evidence=IMP

GO:2000021 "regulation of ion homeostasis" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0019722 "calcium-mediated signaling" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0043266 "regulation of potassium ion transport" evidence=IMP

TAIR|locus:2019439 CBL8 "calcineurin B-like protein 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 83/157 (52%), Positives = 116/157 (73%)

Query:    16 VNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLA 75
             V C      K PRG EDP  LA ET F+V+EIEAL++LFKK+S+++I+DGLI+KEEF LA
Sbjct:     5 VKCFSLKRAKHPRGYEDPHVLASETPFTVNEIEALHDLFKKLSTSIINDGLIHKEEFLLA 64

Query:    76 LFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQ 135
             LF+    ++LFADRVF +FD K NG+++F EF R+LSIFHP +P  +K  F F+L+DL  
Sbjct:    65 LFRNGSMQNLFADRVFYMFDRKRNGVIEFGEFVRSLSIFHPYTPEHEKSAFMFKLFDLHG 124

Query:   136 QGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
              GFIE  E+K+MV A L E+ + LS++ IE+I+++ +
Sbjct:   125 TGFIEPHELKKMVGALLGETDLELSEESIEAIVEQTM 161

GO:0005509 "calcium ion binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0019722 "calcium-mediated signaling" evidence=RCA;TAS

GO:0016020 "membrane" evidence=IDA

TAIR|locus:2133857 CBL7 "calcineurin B-like protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 86/136 (63%), Positives = 110/136 (80%)

Query:    48 EALYELFKKISSA--------VIDD-----GLINKEEFQLALFKTNKKESLFADRVFDLF 94
             +ALYE+FKK+S          V++      G +NKE+F +A+F+T+K ESLF++RVFDLF
Sbjct:    23 KALYEVFKKLSGVDCQRNEGNVVEGVTCYYGEMNKEQFHVAIFQTDKNESLFSERVFDLF 82

Query:    95 DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE 154
             DT H+G+L FEEFARALS+FHP++PIDDKI+ SFQLYDLKQQGFIERQ VKQ+VVATL  
Sbjct:    83 DTNHDGLLGFEEFARALSVFHPSAPIDDKIDLSFQLYDLKQQGFIERQGVKQLVVATLAA 142

Query:   155 SGMNLSDDVIESIIDK 170
             SGM+ SD+++ESIIDK
Sbjct:   143 SGMSQSDEIVESIIDK 158

GO:0005509 "calcium ion binding" evidence=IEA;ISS

GO:0005513 "detection of calcium ion" evidence=ISS

GO:0019722 "calcium-mediated signaling" evidence=RCA

TAIR|locus:2125162 CBL5 "calcineurin B-like protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 72/156 (46%), Positives = 104/156 (66%)

Query:    16 VNC-CDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQL 74
             + C C   L  + R  ED   LA +T FS +E+E L+ LF K++S + +D L+ KE+FQ 
Sbjct:     1 MGCVCSKQL--EGRRQEDISLLASQTFFSEAEVEVLHGLFIKLTSCLSNDNLLTKEKFQF 58

Query:    75 ALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLK 134
              L K  KK SL A+R+F LFD +++G +DF EF   L+IFHPNS   DK  F+F+LYD +
Sbjct:    59 ILIKNTKKRSLSAERIFGLFDMRNDGAIDFGEFVHTLNIFHPNSSPRDKAIFAFRLYDTR 118

Query:   135 QQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK 170
             + GFIE +EVK+M++  L ES + LS+ +I+SI+ K
Sbjct:   119 ETGFIEPEEVKEMIIDVLEESELMLSESIIDSIVSK 154

GO:0005509 "calcium ion binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0019722 "calcium-mediated signaling" evidence=RCA;TAS

GO:0006970 "response to osmotic stress" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009651 "response to salt stress" evidence=IMP

GO:0010118 "stomatal movement" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q75LU8	CNBL3_ORYSJ	No assigned EC number	0.8654	0.9550	0.7555	yes	no
Q8LAS7	CNBL2_ARATH	No assigned EC number	0.8546	0.9606	0.7566	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	178
COG5126	160	COG5126, FRQ1, Ca2+-binding protein (EF-Hand super	7e-11
pfam13833	53	pfam13833, EF_hand_6, EF-hand domain pair	3e-05
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	3e-04
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	6e-04
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	9e-04
cd00213	88	cd00213, S-100, S-100: S-100 domain, which represe	0.001

>gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

 Score = 57.3 bits (139), Expect = 7e-11
 Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)

Query: 40  TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDLFDTK 97
           T  +  +I+ L E F+        DGLI++ E    L     N  E+   +++F+  D  
Sbjct: 12  TQLTEEQIQELKEAFQLF--DRDSDGLIDRNELGKILRSLGFNPSEA-EINKLFEEIDAG 68

Query: 98  HNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGM 157
            N  +DF EF   +S+       ++++  +F+L+D    G+I   E++++    L   G 
Sbjct: 69  -NETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRV----LKSLGE 123

Query: 158 NLSDDVIESIID 169
            LSD+ +E ++ 
Sbjct: 124 RLSDEEVEKLLK 135

Length = 160

>gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)

Query: 63  DDGLINKEEFQ--LALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARAL 111
           + GLI +EE +  LAL   +  E    D +F  FDT  +G + FEEF   L
Sbjct: 1   EKGLITREELKRALALLGISLSEEE-VDILFREFDTDGDGKISFEEFCVLL 50

Length = 53

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 63  DDGLINKEEFQLALFKTNKKESL-FADRVFDLFDTKHNGILDFEEFARALS 112
            DG I+ +E + AL    +  S    D +    D   +G +DFEEF   ++
Sbjct: 13  GDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELMA 63

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 87  ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 146
               F LFD   +G +  +E   AL         +++I+   +  D    G I+ +E  +
Sbjct: 2   LREAFRLFDKDGDGTISADELKAALKSLGEGLS-EEEIDEMIREVDKDGDGKIDFEEFLE 60

Query: 147 MV 148
           ++
Sbjct: 61  LM 62

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 35.8 bits (83), Expect = 9e-04
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 5/54 (9%)

Query: 63  DDGLINKEEFQLALFKTNKKES-----LFADRVFDLFDTKHNGILDFEEFARAL 111
            DG I+ EE +  L     K +        +  F+  D   +G + FEEF  A+
Sbjct: 7   GDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60

Length = 60

>gnl|CDD|238131 cd00213, S-100, S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

 Score = 36.3 bits (85), Expect = 0.001
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 6/67 (8%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
           IE + ++F K S    D   ++K+E       +L  F  N+K+    D++    D   +G
Sbjct: 7   IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDG 66

Query: 101 ILDFEEF 107
            +DF+EF
Sbjct: 67  KVDFQEF 73

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents the interaction site of S100 proteins with their target proteins. There is experimental evidence showing that many S100 proteins have multiple binding partners with diverse mode of interaction with different targets. In addition to S100 proteins (such as S100A1,-3,-4,-6,-7,-10,-11,and -13), this group includes the ''fused'' gene family, a group of calcium binding S100-related proteins. The ''fused'' gene family includes multifunctional epidermal differentiation proteins - profilaggrin, trichohyalin, repetin, hornerin, and cornulin; functionally these proteins are associated with keratin intermediate filaments and partially crosslinked to the cell envelope. These ''fused'' gene proteins contain N-terminal sequence with two Ca-binding EF-hands motif, which may be associated with calcium signaling in epidermal cells and autoprocessing in a calcium-dependent manner. In contrast to S100 proteins, "fused" gene family proteins contain an extraordinary high number of almost perfect peptide repeats with regular array of polar and charged residues similar to many known cell envelope proteins. Length = 88

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	178
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.89
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	99.88
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	99.86
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.79
KOG0038	189	consensus Ca2+-binding kinase interacting protein	99.76
PTZ00183	158	centrin; Provisional	99.73
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	99.73
PTZ00184	149	calmodulin; Provisional	99.72
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	99.62
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.55
PLN02964	644	phosphatidylserine decarboxylase	99.51
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	99.49
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.48
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	99.44
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	99.42
KOG0036	463	consensus Predicted mitochondrial carrier protein	99.41
PTZ00183	158	centrin; Provisional	99.4
PTZ00184	149	calmodulin; Provisional	99.36
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	99.18
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	99.11
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	99.1
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	99.06
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	98.9
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	98.9
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	98.89
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	98.87
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	98.84
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	98.82
KOG0036	463	consensus Predicted mitochondrial carrier protein	98.79
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	98.77
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	98.75
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	98.74
PF00036	29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	98.72
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	98.72
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	98.72
cd00052	67	EH Eps15 homology domain; found in proteins implic	98.72
cd00213	88	S-100 S-100: S-100 domain, which represents the la	98.71
cd00052	67	EH Eps15 homology domain; found in proteins implic	98.67
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	98.66
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	98.66
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	98.65
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	98.65
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	98.64
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	98.63
KOG0041	244	consensus Predicted Ca2+-binding protein, EF-Hand	98.61
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	98.61
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	98.58
KOG0040	2399	consensus Ca2+-binding actin-bundling protein (spe	98.57
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	98.57
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	98.56
KOG2562	493	consensus Protein phosphatase 2 regulatory subunit	98.53
cd00213	88	S-100 S-100: S-100 domain, which represents the la	98.5
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	98.5
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	98.47
KOG0038	189	consensus Ca2+-binding kinase interacting protein	98.46
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	98.46
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	98.44
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	98.44
cd05024	91	S-100A10 S-100A10: A subgroup of the S-100A10 doma	98.43
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	98.41
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	98.4
PF14658	66	EF-hand_9: EF-hand domain	98.39
PF13405	31	EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J	98.36
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	98.31
PF13202	25	EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ	98.26
PF00036	29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	98.18
PF12763	104	EF-hand_4: Cytoskeletal-regulatory complex EF hand	98.16
PRK12309	391	transaldolase/EF-hand domain-containing protein; P	98.05
KOG2643	489	consensus Ca2+ binding protein, contains EF-hand m	98.05
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	98.02
KOG0751	694	consensus Mitochondrial aspartate/glutamate carrie	97.98
PLN02964	644	phosphatidylserine decarboxylase	97.97
cd05024	91	S-100A10 S-100A10: A subgroup of the S-100A10 doma	97.86
KOG4251	362	consensus Calcium binding protein [General functio	97.86
PF14658	66	EF-hand_9: EF-hand domain	97.84
PF14788	51	EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QA	97.75
KOG0751	694	consensus Mitochondrial aspartate/glutamate carrie	97.64
KOG4347	671	consensus GTPase-activating protein VRP [General f	97.59
KOG0046	627	consensus Ca2+-binding actin-bundling protein (fim	97.49
KOG2643	489	consensus Ca2+ binding protein, contains EF-hand m	97.48
KOG4666	412	consensus Predicted phosphate acyltransferase, con	97.45
PF13202	25	EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ	97.44
PF12763	104	EF-hand_4: Cytoskeletal-regulatory complex EF hand	97.41
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	97.4
PF14788	51	EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QA	97.39
PRK12309	391	transaldolase/EF-hand domain-containing protein; P	97.34
PF13405	31	EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J	97.32
PF10591	113	SPARC_Ca_bdg: Secreted protein acidic and rich in	97.26
KOG0041	244	consensus Predicted Ca2+-binding protein, EF-Hand	97.25
smart00054	29	EFh EF-hand, calcium binding motif. EF-hands are c	97.23
KOG0040	2399	consensus Ca2+-binding actin-bundling protein (spe	97.14
KOG4666	412	consensus Predicted phosphate acyltransferase, con	96.97
KOG4251	362	consensus Calcium binding protein [General functio	96.8
PF10591	113	SPARC_Ca_bdg: Secreted protein acidic and rich in	96.8
KOG0169	746	consensus Phosphoinositide-specific phospholipase	96.69
KOG3555	434	consensus Ca2+-binding proteoglycan Testican [Gene	96.38
smart00054	29	EFh EF-hand, calcium binding motif. EF-hands are c	96.14
KOG4065	144	consensus Uncharacterized conserved protein [Funct	96.14
KOG2562	493	consensus Protein phosphatase 2 regulatory subunit	95.77
PF09279	83	EF-hand_like: Phosphoinositide-specific phospholip	95.75
KOG4578	421	consensus Uncharacterized conserved protein, conta	95.43
KOG0035	890	consensus Ca2+-binding actin-bundling protein (act	95.37
PF09068	127	EF-hand_2: EF hand; InterPro: IPR015153 Like other	95.32
PF08414	100	NADPH_Ox: Respiratory burst NADPH oxidase; InterPr	94.54
KOG1955	737	consensus Ral-GTPase effector RALBP1 [Intracellula	94.49
PF05042	174	Caleosin: Caleosin related protein; InterPro: IPR0	94.2
PF09279	83	EF-hand_like: Phosphoinositide-specific phospholip	93.1
KOG1955	737	consensus Ral-GTPase effector RALBP1 [Intracellula	92.86
KOG1029	1118	consensus Endocytic adaptor protein intersectin [S	92.8
KOG1029	1118	consensus Endocytic adaptor protein intersectin [S	92.18
PF05517	154	p25-alpha: p25-alpha ; InterPro: IPR008907 This fa	91.56
KOG0046	627	consensus Ca2+-binding actin-bundling protein (fim	91.42
PLN02952	599	phosphoinositide phospholipase C	91.33
PF08726	69	EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPr	90.82
KOG0039	646	consensus Ferric reductase, NADH/NADPH oxidase and	90.72
KOG4578	421	consensus Uncharacterized conserved protein, conta	90.61
KOG4065	144	consensus Uncharacterized conserved protein [Funct	90.55
PF09069	90	EF-hand_3: EF-hand; InterPro: IPR015154 Like other	89.95
KOG1707	625	consensus Predicted Ras related/Rac-GTP binding pr	89.38
KOG2557	427	consensus Uncharacterized conserved protein, conta	88.94
PF11829	96	DUF3349: Protein of unknown function (DUF3349); In	88.86
KOG3555	434	consensus Ca2+-binding proteoglycan Testican [Gene	88.71
KOG3866	442	consensus DNA-binding protein of the nucleobindin	88.7
PLN02952	599	phosphoinositide phospholipase C	88.26
PF14513	138	DAG_kinase_N: Diacylglycerol kinase N-terminus; PD	86.66
KOG0042	680	consensus Glycerol-3-phosphate dehydrogenase [Ener	86.2
KOG4286	966	consensus Dystrophin-like protein [Cell motility;	85.28
KOG0169	746	consensus Phosphoinositide-specific phospholipase	84.45
PF05517	154	p25-alpha: p25-alpha ; InterPro: IPR008907 This fa	83.95
PF05042	174	Caleosin: Caleosin related protein; InterPro: IPR0	80.59

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.89  E-value=9.5e-22  Score=137.13  Aligned_cols=131  Identities=24%  Similarity=0.421  Sum_probs=118.5

Q ss_pred             HHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           36 LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        36 ~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      +...+.|+.+++++|+++|..+|++  ++|.|++.+|..++...+ ...+..+.++|..++. +.+.|+|.+|+.++...
T Consensus         8 ~~~~~~~t~~qi~~lkeaF~l~D~d--~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~   84 (160)
T COG5126           8 LLTFTQLTEEQIQELKEAFQLFDRD--SDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVK   84 (160)
T ss_pred             hhhcccCCHHHHHHHHHHHHHhCcC--CCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHH
Confidence            5666789999999999999999999  999999999999997744 4557788999999999 88999999999999998


Q ss_pred             CCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHh
Q 030405          115 HPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLS  173 (178)
Q Consensus       115 ~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~  173 (178)
                      ......+++++++|+.||.|++|+|+..|++++++.+    |..++++++++++..+-.
T Consensus        85 ~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~l----ge~~~deev~~ll~~~d~  139 (160)
T COG5126          85 LKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSL----GERLSDEEVEKLLKEYDE  139 (160)
T ss_pred             hccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhh----cccCCHHHHHHHHHhcCC
Confidence            8768889999999999999999999999999999877    999999999988876543

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.88  E-value=1e-21  Score=141.41  Aligned_cols=148  Identities=31%  Similarity=0.510  Sum_probs=129.8

Q ss_pred             CccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--CCCHHHHHHHHHHHhcC
Q 030405           20 DADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--KKESLFADRVFDLFDTK   97 (178)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~~~~~~~~~lf~~~d~~   97 (178)
                      .++++|     +.+.++.+.++|+..++..|++.|..-+    ++|.++..+|..++....  .....+++.+|+.+|.+
T Consensus         6 ~~~~~~-----~~~e~l~~~t~f~~~ei~~~Yr~Fk~~c----P~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~   76 (193)
T KOG0044|consen    6 NSKLQP-----ESLEQLVQQTKFSKKEIQQWYRGFKNEC----PSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKN   76 (193)
T ss_pred             cccCCc-----HHHHHHHHhcCCCHHHHHHHHHHhcccC----CCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhccc
Confidence            445555     8899999999999999999999999877    579999999999987733  34466789999999999


Q ss_pred             CCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCC---CCCHHHHHHHHHHHHhh
Q 030405           98 HNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGM---NLSDDVIESIIDKVLSL  174 (178)
Q Consensus        98 ~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~---~l~~~~~~~~~~~~~~~  174 (178)
                      ++|.|+|.||+..++...+ +..+++++++|++||.||+|+|+++|+..++.+++...+.   +..+.-.++.++.+|++
T Consensus        77 ~dg~i~F~Efi~als~~~r-Gt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k  155 (193)
T KOG0044|consen   77 KDGTIDFLEFICALSLTSR-GTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSK  155 (193)
T ss_pred             CCCCcCHHHHHHHHHHHcC-CcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHH
Confidence            9999999999999999998 8999999999999999999999999999999999887663   23455677899999999


Q ss_pred             ccC
Q 030405          175 IQL  177 (178)
Q Consensus       175 ~D~  177 (178)
                      +|.
T Consensus       156 ~D~  158 (193)
T KOG0044|consen  156 MDK  158 (193)
T ss_pred             cCC
Confidence            884

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=99.86  E-value=2.7e-20  Score=133.92  Aligned_cols=153  Identities=41%  Similarity=0.612  Sum_probs=128.8

Q ss_pred             hcccCccccCCCCCCCcHHHHHhhcC----CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHH
Q 030405           16 VNCCDADLYKQPRGLEDPEALARETV----FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF   91 (178)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf   91 (178)
                      ||+..+.+..    .+.+..+...++    |+..||.+|+.+|.+++.+. +.|++++++|..+.   ....+++..+++
T Consensus         1 Mg~~~s~~~~----~~~~~~~~~~~~~~~~fs~~EI~~L~~rF~kl~~~~-~~g~lt~eef~~i~---~~~~Np~~~rI~   72 (187)
T KOG0034|consen    1 MGNLSSTLLS----DEDLEELQMYTGDPTQFSANEIERLYERFKKLDRNN-GDGYLTKEEFLSIP---ELALNPLADRII   72 (187)
T ss_pred             CCcccccccc----hhhhHHHHhccCCCcccCHHHHHHHHHHHHHhcccc-ccCccCHHHHHHHH---HHhcCcHHHHHH
Confidence            5666665422    255677777777    99999999999999999764 67899999999887   455577789999


Q ss_pred             HHHhcCCCCc-ccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 030405           92 DLFDTKHNGI-LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK  170 (178)
Q Consensus        92 ~~~d~~~~g~-i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~  170 (178)
                      +.++.+++|. |+|++|+.++..+......+++++.+|++||.+++|+|+++|+.+++..+....... +++.++.+++.
T Consensus        73 ~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~-~~e~~~~i~d~  151 (187)
T KOG0034|consen   73 DRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDM-SDEQLEDIVDK  151 (187)
T ss_pred             HHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcc-hHHHHHHHHHH
Confidence            9999998888 999999999999998666667999999999999999999999999999986443222 59999999999


Q ss_pred             HHhhccC
Q 030405          171 VLSLIQL  177 (178)
Q Consensus       171 ~~~~~D~  177 (178)
                      +|.++|.
T Consensus       152 t~~e~D~  158 (187)
T KOG0034|consen  152 TFEEADT  158 (187)
T ss_pred             HHHHhCC
Confidence            9999984

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.79  E-value=7.5e-18  Score=118.62  Aligned_cols=126  Identities=24%  Similarity=0.384  Sum_probs=109.0

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI  120 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~  120 (178)
                      ++..++..+..+|..+|.+  ++|+|+..++..++...+.. ....+..+++.+|.+++|.|++++|..++.........
T Consensus         2 ~~~~~~~el~~~F~~fD~d--~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~   79 (151)
T KOG0027|consen    2 LSEEQILELKEAFQLFDKD--GDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTD   79 (151)
T ss_pred             CCHHHHHHHHHHHHHHCCC--CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccc
Confidence            5678889999999999999  99999999999999885544 45668999999999999999999999999876653333


Q ss_pred             ----hHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHh
Q 030405          121 ----DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLS  173 (178)
Q Consensus       121 ----~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~  173 (178)
                          .+.++.+|+.||.|++|+|+.+||+.+|..+    |..++.++++.+++.+-.
T Consensus        80 ~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~l----g~~~~~~e~~~mi~~~d~  132 (151)
T KOG0027|consen   80 EEASSEELKEAFRVFDKDGDGFISASELKKVLTSL----GEKLTDEECKEMIREVDV  132 (151)
T ss_pred             ccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHh----CCcCCHHHHHHHHHhcCC
Confidence                3489999999999999999999999999887    889998888877766543

>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]

Probab=99.76  E-value=8.4e-18  Score=113.69  Aligned_cols=154  Identities=24%  Similarity=0.406  Sum_probs=126.0

Q ss_pred             hcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCC------cccHHHHHHHHhcCCCCCHHHHHH
Q 030405           16 VNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDG------LINKEEFQLALFKTNKKESLFADR   89 (178)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g------~i~~~ef~~~l~~~~~~~~~~~~~   89 (178)
                      ||+....-+.     +++...+..+.|+.++|-+++.+|+.+.++.++..      .+...-+..+...+.++.+++-++
T Consensus         1 MGNK~~vFT~-----eqLd~YQDCTFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~kMPELkenpfk~r   75 (189)
T KOG0038|consen    1 MGNKQTVFTE-----EQLDEYQDCTFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIEKMPELKENPFKRR   75 (189)
T ss_pred             CCCccceeeH-----HHHhhhcccccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHhhChhhhcChHHHH
Confidence            5665555555     88999999999999999999999999987622211      122223333334466777888899


Q ss_pred             HHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHH
Q 030405           90 VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIID  169 (178)
Q Consensus        90 lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~  169 (178)
                      +...|+.++.|.++|++|+.+++.++.....+-++..+|++||.|+++.|+.+++...+.+++   ..++|++|++.+++
T Consensus        76 i~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lT---r~eLs~eEv~~i~e  152 (189)
T KOG0038|consen   76 ICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLT---RDELSDEEVELICE  152 (189)
T ss_pred             HHHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHh---hccCCHHHHHHHHH
Confidence            999999999999999999999998887555566788999999999999999999999999884   45799999999999


Q ss_pred             HHHhhccC
Q 030405          170 KVLSLIQL  177 (178)
Q Consensus       170 ~~~~~~D~  177 (178)
                      ++++++|+
T Consensus       153 kvieEAD~  160 (189)
T KOG0038|consen  153 KVIEEADL  160 (189)
T ss_pred             HHHHHhcC
Confidence            99999986

>PTZ00183 centrin; Provisional

Probab=99.73  E-value=4.2e-16  Score=110.04  Aligned_cols=125  Identities=19%  Similarity=0.323  Sum_probs=107.4

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP  119 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~  119 (178)
                      ++++.+++.+...|..+|++  ++|.|+..+|..++...+. .....+..+|..+|.+++|.|+|++|+..+........
T Consensus        10 ~~~~~~~~~~~~~F~~~D~~--~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   87 (158)
T PTZ00183         10 GLTEDQKKEIREAFDLFDTD--GSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERD   87 (158)
T ss_pred             CCCHHHHHHHHHHHHHhCCC--CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCC
Confidence            48889999999999999999  9999999999999876443 34566899999999999999999999998876543355


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ..+.++.+|+.+|.+++|.|+.+||..++..+    |..++..++..++..+
T Consensus        88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~----~~~l~~~~~~~~~~~~  135 (158)
T PTZ00183         88 PREEILKAFRLFDDDKTGKISLKNLKRVAKEL----GETITDEELQEMIDEA  135 (158)
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh----CCCCCHHHHHHHHHHh
Confidence            66789999999999999999999999999876    7789998888776554

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=99.73  E-value=2.4e-16  Score=108.23  Aligned_cols=130  Identities=19%  Similarity=0.315  Sum_probs=112.8

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS  118 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~  118 (178)
                      ..++..+-+.++..|..++++  +.|+|+..+|..++...+.. .+..+..+...+|.+++|.|+|++|+..+.......
T Consensus        25 ~~l~~~q~q~i~e~f~lfd~~--~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~  102 (172)
T KOG0028|consen   25 SELTEEQKQEIKEAFELFDPD--MAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGER  102 (172)
T ss_pred             ccccHHHHhhHHHHHHhhccC--CCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhcc
Confidence            346778888999999999998  99999999998887775543 456678899999999999999999999977655557


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhc
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLI  175 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~  175 (178)
                      ++.+++..+|+++|.|++|.|+..+|+.+...+    |+++++++++++++++-...
T Consensus       103 dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeL----genltD~El~eMIeEAd~d~  155 (172)
T KOG0028|consen  103 DTKEEIKKAFRLFDDDKTGKISQRNLKRVAKEL----GENLTDEELMEMIEEADRDG  155 (172)
T ss_pred             CcHHHHHHHHHcccccCCCCcCHHHHHHHHHHh----CccccHHHHHHHHHHhcccc
Confidence            799999999999999999999999999998887    99999999999988765443

>PTZ00184 calmodulin; Provisional

Probab=99.72  E-value=6.1e-16  Score=107.96  Aligned_cols=125  Identities=20%  Similarity=0.396  Sum_probs=106.6

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP  119 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~  119 (178)
                      .++.++++.+...|..+|.+  ++|.|+..+|..++...+ ......+..+|+.+|.+++|.|+|++|+..+........
T Consensus         4 ~~~~~~~~~~~~~F~~~D~~--~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~   81 (149)
T PTZ00184          4 QLTEEQIAEFKEAFSLFDKD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTD   81 (149)
T ss_pred             ccCHHHHHHHHHHHHHHcCC--CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCc
Confidence            37888999999999999999  999999999999886633 234567899999999999999999999999887654345


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ..+.+..+|+.+|.+++|.|+.+|+..++..+    |..++.+++..++..+
T Consensus        82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~----~~~~~~~~~~~~~~~~  129 (149)
T PTZ00184         82 SEEEIKEAFKVFDRDGNGFISAAELRHVMTNL----GEKLTDEEVDEMIREA  129 (149)
T ss_pred             HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHH----CCCCCHHHHHHHHHhc
Confidence            66788999999999999999999999999876    7788888887766554

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.62  E-value=4.1e-14  Score=96.71  Aligned_cols=120  Identities=18%  Similarity=0.326  Sum_probs=104.7

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI  120 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~  120 (178)
                      |++.||+.++++|..+|.+  ++|.|++++++..+.+.+ ...+..+..+++.    ..|.|+|.-|+.++.......++
T Consensus        26 f~q~QIqEfKEAF~~mDqn--rDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~gtdp   99 (171)
T KOG0031|consen   26 FDQSQIQEFKEAFNLMDQN--RDGFIDKEDLRDMLASLGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLNGTDP   99 (171)
T ss_pred             hhHHHHHHHHHHHHHHhcc--CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcCCCH
Confidence            7899999999999999999  999999999999998854 3455666777765    46789999999999876665788


Q ss_pred             hHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       121 ~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ++.+..+|+.||.+++|.|..+.++.+|...    |..++++|++.+.+..
T Consensus       100 e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~----gDr~~~eEV~~m~r~~  146 (171)
T KOG0031|consen  100 EEVILNAFKTFDDEGSGKIDEDYLRELLTTM----GDRFTDEEVDEMYREA  146 (171)
T ss_pred             HHHHHHHHHhcCccCCCccCHHHHHHHHHHh----cccCCHHHHHHHHHhC
Confidence            8889999999999999999999999999886    8899999999887654

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.55  E-value=1.6e-13  Score=95.94  Aligned_cols=135  Identities=21%  Similarity=0.326  Sum_probs=108.8

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCCCC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKE   83 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~~~   83 (178)
                      .-|+.+|..+.....+.++.     ..+..+.+..++++.+ ..+.+.|..+|.   +++.|+..+|..++..  .....
T Consensus        20 ~~lkeaF~l~D~d~~G~I~~-----~el~~ilr~lg~~~s~-~ei~~l~~~~d~---~~~~idf~~Fl~~ms~~~~~~~~   90 (160)
T COG5126          20 QELKEAFQLFDRDSDGLIDR-----NELGKILRSLGFNPSE-AEINKLFEEIDA---GNETVDFPEFLTVMSVKLKRGDK   90 (160)
T ss_pred             HHHHHHHHHhCcCCCCCCcH-----HHHHHHHHHcCCCCcH-HHHHHHHHhccC---CCCccCHHHHHHHHHHHhccCCc
Confidence            34677788888888888888     8899988776665332 234444554443   4689999999999866  34455


Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ...+..+|+.||.+++|.|+..+++.++..+.. ..+++++..+++.+|.|++|.|++++|.+.+..
T Consensus        91 ~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge-~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~  156 (160)
T COG5126          91 EEELREAFKLFDKDHDGYISIGELRRVLKSLGE-RLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD  156 (160)
T ss_pred             HHHHHHHHHHhCCCCCceecHHHHHHHHHhhcc-cCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence            677899999999999999999999999998887 688899999999999999999999999998743

>PLN02964 phosphatidylserine decarboxylase

Probab=99.51  E-value=4.1e-13  Score=112.42  Aligned_cols=114  Identities=19%  Similarity=0.282  Sum_probs=96.2

Q ss_pred             CCcHHHHHhh--cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--CCCHH---HHHHHHHHHhcCCCCcc
Q 030405           30 LEDPEALARE--TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--KKESL---FADRVFDLFDTKHNGIL  102 (178)
Q Consensus        30 ~~~~~~~~~~--~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~~~~~---~~~~lf~~~d~~~~g~i  102 (178)
                      .+.+..+...  +.|+.+|++.+++.|+.+|++  ++|.+    +..++...+  .+.+.   +++.+|+.+|.+++|.|
T Consensus       123 ~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~d--gdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~I  196 (644)
T PLN02964        123 KNTLVGYCELDLFDFVTQEPESACESFDLLDPS--SSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQL  196 (644)
T ss_pred             HHHhhhheeecHhhccHHHHHHHHHHHHHHCCC--CCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeE
Confidence            3677777777  889999999999999999999  99987    555554433  22222   37899999999999999


Q ss_pred             cHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          103 DFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       103 ~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      +++||+.++..+.. ...+++++.+|+.||.|++|+|+.+||..++..
T Consensus       197 dfdEFl~lL~~lg~-~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~  243 (644)
T PLN02964        197 SFSEFSDLIKAFGN-LVAANKKEELFKAADLNGDGVVTIDELAALLAL  243 (644)
T ss_pred             cHHHHHHHHHHhcc-CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            99999999988764 567888999999999999999999999999987

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.49  E-value=6.7e-13  Score=95.91  Aligned_cols=113  Identities=22%  Similarity=0.336  Sum_probs=98.5

Q ss_pred             HHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHH
Q 030405           47 IEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKI  124 (178)
Q Consensus        47 i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~  124 (178)
                      -..+...|...|++  ++|.|+..|+..+|..  -..-+...++.+...||.+.+|+|+++||..+|..+.       .+
T Consensus        56 ~~~~~~~f~~vD~d--~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~-------~W  126 (221)
T KOG0037|consen   56 FPQLAGWFQSVDRD--RSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYIN-------QW  126 (221)
T ss_pred             cHHHHHHHHhhCcc--ccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHH-------HH
Confidence            45788999999999  9999999999999874  2233456689999999999999999999999998774       49


Q ss_pred             HHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 030405          125 EFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL  172 (178)
Q Consensus       125 ~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~  172 (178)
                      +.+|+.||.|++|.|+..||++.|..+    |..++++-++.++++.-
T Consensus       127 r~vF~~~D~D~SG~I~~sEL~~Al~~~----Gy~Lspq~~~~lv~kyd  170 (221)
T KOG0037|consen  127 RNVFRTYDRDRSGTIDSSELRQALTQL----GYRLSPQFYNLLVRKYD  170 (221)
T ss_pred             HHHHHhcccCCCCcccHHHHHHHHHHc----CcCCCHHHHHHHHHHhc
Confidence            999999999999999999999999887    99999988777776653

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.48  E-value=9.5e-13  Score=92.63  Aligned_cols=134  Identities=22%  Similarity=0.261  Sum_probs=110.0

Q ss_pred             ccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC--C--
Q 030405            7 GLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK--K--   82 (178)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~--~--   82 (178)
                      -++.+|..+.-+..+.++.     ..+....+..+.++. ...+...+...|.+  ++|.|+..+|..++.....  .  
T Consensus         9 el~~~F~~fD~d~~G~i~~-----~el~~~lr~lg~~~t-~~el~~~~~~~D~d--g~g~I~~~eF~~l~~~~~~~~~~~   80 (151)
T KOG0027|consen    9 ELKEAFQLFDKDGDGKISV-----EELGAVLRSLGQNPT-EEELRDLIKEIDLD--GDGTIDFEEFLDLMEKLGEEKTDE   80 (151)
T ss_pred             HHHHHHHHHCCCCCCcccH-----HHHHHHHHHcCCCCC-HHHHHHHHHHhCCC--CCCeEcHHHHHHHHHhhhcccccc
Confidence            3566777777777777766     788888887766522 24577788888888  9999999999999866322  1  


Q ss_pred             --CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           83 --ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        83 --~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                        ....+..+|+.+|.+++|.|+..++..++..+.. ....+++..+++.+|.|++|.|+++||..++.
T Consensus        81 ~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~-~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~  148 (151)
T KOG0027|consen   81 EASSEELKEAFRVFDKDGDGFISASELKKVLTSLGE-KLTDEECKEMIREVDVDGDGKVNFEEFVKMMS  148 (151)
T ss_pred             cccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCC-cCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHh
Confidence              2346899999999999999999999999999988 56688999999999999999999999998874

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.44  E-value=2.8e-12  Score=86.36  Aligned_cols=123  Identities=19%  Similarity=0.290  Sum_probs=99.7

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCC-HHHHHHHHHHHhcC--CCCcccHHHHHHHHHhhCCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKE-SLFADRVFDLFDTK--HNGILDFEEFARALSIFHPN  117 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~-~~~~~~lf~~~d~~--~~g~i~~~ef~~~~~~~~~~  117 (178)
                      .++++++..++++|..+|..  ++|+|+..+...++...+..+ +..+.+....+..+  +-..++|++|+-++..+.++
T Consensus         4 ~~~~d~~~e~ke~F~lfD~~--gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vakn   81 (152)
T KOG0030|consen    4 AFTPDQMEEFKEAFLLFDRT--GDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKN   81 (152)
T ss_pred             ccCcchHHHHHHHHHHHhcc--CcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhc
Confidence            35677788999999999999  999999999999998866544 34455555555554  33679999999998877654


Q ss_pred             C--ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHH
Q 030405          118 S--PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIID  169 (178)
Q Consensus       118 ~--~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~  169 (178)
                      .  ...+..-.-++.||++++|.|...|++++|.++    |+.++++|++.++.
T Consensus        82 k~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttl----Gekl~eeEVe~Lla  131 (152)
T KOG0030|consen   82 KDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTL----GEKLTEEEVEELLA  131 (152)
T ss_pred             cccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHH----HhhccHHHHHHHHc
Confidence            3  334667788999999999999999999999998    99999999988765

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.42  E-value=1.1e-12  Score=94.82  Aligned_cols=127  Identities=17%  Similarity=0.203  Sum_probs=98.9

Q ss_pred             cccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-CCCCCHHHHHHHHHHHh
Q 030405           17 NCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFD   95 (178)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~~~~~~~~~lf~~~d   95 (178)
                      .|..+.++.     ...+.+.+...-....-......|..+|.+  ++|.|+..+|..++.. .....+..++..|+.+|
T Consensus        38 ~cP~G~~~~-----~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~--~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD  110 (193)
T KOG0044|consen   38 ECPSGRLTL-----EEFREIYASFFPDGDASKYAELVFRTFDKN--KDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYD  110 (193)
T ss_pred             cCCCCccCH-----HHHHHHHHHHCCCCCHHHHHHHHHHHhccc--CCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeec
Confidence            444666666     778887777654455566777889999999  9999999999888765 33344455677899999


Q ss_pred             cCCCCcccHHHHHHHHHhhCC----------CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           96 TKHNGILDFEEFARALSIFHP----------NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        96 ~~~~g~i~~~ef~~~~~~~~~----------~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .+++|.|+++|++.++..+..          ...+++.+..+|+.+|.|+||.||.+||...+.+
T Consensus       111 ~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~  175 (193)
T KOG0044|consen  111 LDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA  175 (193)
T ss_pred             CCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence            999999999999887664321          1235577899999999999999999999988753

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=99.41  E-value=6.4e-12  Score=98.39  Aligned_cols=123  Identities=23%  Similarity=0.332  Sum_probs=105.0

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC--CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK--KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP  119 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~--~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~  119 (178)
                      ..++.-.++...|+.+|.+  ++|.++..++.+.+.....  .....++.+|...|.|.+|.++|.+|...+.      .
T Consensus         8 ~~~er~~r~~~lf~~lD~~--~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~------~   79 (463)
T KOG0036|consen    8 TDEERDIRIRCLFKELDSK--NDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLD------N   79 (463)
T ss_pred             CcHHHHHHHHHHHHHhccC--CCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHH------H
Confidence            3445557888999999988  8999999999988766332  3446678999999999999999999999884      3


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhcc
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQ  176 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~D  176 (178)
                      .+.++..+|+..|.+++|.|+.+|+.+.|+.+    |.++++++++.++++++.+..
T Consensus        80 ~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~----gi~l~de~~~k~~e~~d~~g~  132 (463)
T KOG0036|consen   80 KELELYRIFQSIDLEHDGKIDPNEIWRYLKDL----GIQLSDEKAAKFFEHMDKDGK  132 (463)
T ss_pred             hHHHHHHHHhhhccccCCccCHHHHHHHHHHh----CCccCHHHHHHHHHHhccCCC
Confidence            45678999999999999999999999999887    999999999999988887643

>PTZ00183 centrin; Provisional

Probab=99.40  E-value=8.4e-12  Score=87.94  Aligned_cols=133  Identities=14%  Similarity=0.209  Sum_probs=103.1

Q ss_pred             ccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCCC
Q 030405            7 GLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKK   82 (178)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~~   82 (178)
                      .|..+|..+....++.++.     .++....+..++  +..   .+...|..+|.+  ++|.|+..+|..++..  ....
T Consensus        18 ~~~~~F~~~D~~~~G~i~~-----~e~~~~l~~~g~~~~~~---~~~~l~~~~d~~--~~g~i~~~eF~~~~~~~~~~~~   87 (158)
T PTZ00183         18 EIREAFDLFDTDGSGTIDP-----KELKVAMRSLGFEPKKE---EIKQMIADVDKD--GSGKIDFEEFLDIMTKKLGERD   87 (158)
T ss_pred             HHHHHHHHhCCCCCCcccH-----HHHHHHHHHhCCCCCHH---HHHHHHHHhCCC--CCCcEeHHHHHHHHHHHhcCCC
Confidence            3455666666666677666     777776665443  433   466777777887  8999999999987654  2233


Q ss_pred             CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           83 ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        83 ~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ....++.+|+.+|.+++|.|+.++|..++..... ....+.+..+|..+|.+++|.|+.+||..++..
T Consensus        88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~-~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  154 (158)
T PTZ00183         88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELGE-TITDEELQEMIDEADRNGDGEISEEEFYRIMKK  154 (158)
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            4456789999999999999999999999987654 456788999999999999999999999998854

>PTZ00184 calmodulin; Provisional

Probab=99.36  E-value=2.2e-11  Score=84.84  Aligned_cols=134  Identities=15%  Similarity=0.249  Sum_probs=103.1

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--CCCC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--NKKE   83 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~~~~   83 (178)
                      ..+..+|..+..+..+.++.     ..+..+....+.+.. -..+...|..+|.+  ++|.|+..+|..++...  ....
T Consensus        11 ~~~~~~F~~~D~~~~G~i~~-----~e~~~~l~~~~~~~~-~~~~~~~~~~~d~~--~~g~i~~~ef~~~l~~~~~~~~~   82 (149)
T PTZ00184         11 AEFKEAFSLFDKDGDGTITT-----KELGTVMRSLGQNPT-EAELQDMINEVDAD--GNGTIDFPEFLTLMARKMKDTDS   82 (149)
T ss_pred             HHHHHHHHHHcCCCCCcCCH-----HHHHHHHHHhCCCCC-HHHHHHHHHhcCcC--CCCcCcHHHHHHHHHHhccCCcH
Confidence            44666777777777777776     777776665443222 13566677777777  89999999999887542  1223


Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ...+..+|+.+|.+++|.|+.++|..++..... ....+.+..+|+.+|.+++|.|+.+||..++
T Consensus        83 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  146 (149)
T PTZ00184         83 EEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE-KLTDEEVDEMIREADVDGDGQINYEEFVKMM  146 (149)
T ss_pred             HHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC-CCCHHHHHHHHHhcCCCCCCcCcHHHHHHHH
Confidence            345789999999999999999999999987654 4567889999999999999999999999876

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=99.18  E-value=8.5e-10  Score=76.20  Aligned_cols=116  Identities=16%  Similarity=0.272  Sum_probs=90.3

Q ss_pred             CcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCCCCHHHHHHHHHHHhcCCCCcccHHHHH
Q 030405           31 EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILDFEEFA  108 (178)
Q Consensus        31 ~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~  108 (178)
                      ..+.--....+|.... ..+.+.....|++  +.|+|+.++|+..+..  ........+...|+.+|.+++|.|++.+|.
T Consensus        53 ~EL~vAmralGFE~~k-~ei~kll~d~dk~--~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~D~D~~Gkis~~~lk  129 (172)
T KOG0028|consen   53 EELKVAMRALGFEPKK-EEILKLLADVDKE--GSGKITFEDFRRVMTVKLGERDTKEEIKKAFRLFDDDKTGKISQRNLK  129 (172)
T ss_pred             HHHHHHHHHcCCCcch-HHHHHHHHhhhhc--cCceechHHHHHHHHHHHhccCcHHHHHHHHHcccccCCCCcCHHHHH
Confidence            4444445555665221 2334444455655  8999999999987644  223356778999999999999999999999


Q ss_pred             HHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          109 RALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       109 ~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .+...+.. ...+++++...+.+|.|++|.|..+||..+|+.
T Consensus       130 rvakeLge-nltD~El~eMIeEAd~d~dgevneeEF~~imk~  170 (172)
T KOG0028|consen  130 RVAKELGE-NLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK  170 (172)
T ss_pred             HHHHHhCc-cccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence            99999987 678899999999999999999999999998864

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=99.11  E-value=1.3e-09  Score=78.77  Aligned_cols=96  Identities=20%  Similarity=0.291  Sum_probs=75.3

Q ss_pred             HHHhhcccCCCCCc-ccHHHHHHHHhc--CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCh--h----HH
Q 030405           53 LFKKISSAVIDDGL-INKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI--D----DK  123 (178)
Q Consensus        53 ~F~~~d~~~~~~g~-i~~~ef~~~l~~--~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~--~----e~  123 (178)
                      .++.++.+  ++|. |++.+|...+..  ........++-+|+.+|.+++|.|+.+++..++..+......  +    +-
T Consensus        71 I~~~f~~~--~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i  148 (187)
T KOG0034|consen   71 IIDRFDTD--GNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDI  148 (187)
T ss_pred             HHHHHhcc--CCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHH
Confidence            44444555  6666 999999998766  223333467889999999999999999999999887764444  2    33


Q ss_pred             HHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          124 IEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       124 ~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      +.+.|..+|.|+||.|+.+||..++.+
T Consensus       149 ~d~t~~e~D~d~DG~IsfeEf~~~v~~  175 (187)
T KOG0034|consen  149 VDKTFEEADTDGDGKISFEEFCKVVEK  175 (187)
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence            677999999999999999999999854

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=99.10  E-value=2.9e-10  Score=68.63  Aligned_cols=62  Identities=26%  Similarity=0.406  Sum_probs=45.0

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCC---CChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPN---SPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~---~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ++++|+.+|.+++|.|+.+||..++..+...   ...++.+..+|+.+|.|++|.|+.+||..++
T Consensus         2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            4677888888888888888888877766531   1223456667888888888888888887764

...

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.06  E-value=2.8e-09  Score=77.34  Aligned_cols=82  Identities=22%  Similarity=0.408  Sum_probs=43.5

Q ss_pred             HHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHH
Q 030405           47 IEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIE  125 (178)
Q Consensus        47 i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~  125 (178)
                      |+.|+..|..+|++  ++|.|+.+||..+|...+.. +....+.|++.+|....|.|.|++|+.+|..+..       +-
T Consensus       123 i~~Wr~vF~~~D~D--~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~-------lt  193 (221)
T KOG0037|consen  123 INQWRNVFRTYDRD--RSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQR-------LT  193 (221)
T ss_pred             HHHHHHHHHhcccC--CCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHHH-------HH
Confidence            34555555555555  55555555555555553322 2334455555555544555555555555554432       44


Q ss_pred             HHHHhhCCCCCC
Q 030405          126 FSFQLYDLKQQG  137 (178)
Q Consensus       126 ~~F~~~D~d~~G  137 (178)
                      .+|+.+|++.+|
T Consensus       194 ~~Fr~~D~~q~G  205 (221)
T KOG0037|consen  194 EAFRRRDTAQQG  205 (221)
T ss_pred             HHHHHhccccce
Confidence            555555555555

>smart00027 EH Eps15 homology domain

Probab=98.90  E-value=1.8e-08  Score=65.43  Aligned_cols=68  Identities=22%  Similarity=0.416  Sum_probs=36.4

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      ++.+++..+...|..+|.+  ++|.|+..++..++...+. ....++.++..+|.+++|.|+|++|+.++.
T Consensus         4 ls~~~~~~l~~~F~~~D~d--~~G~Is~~el~~~l~~~~~-~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~   71 (96)
T smart00027        4 ISPEDKAKYEQIFRSLDKN--QDGTVTGAQAKPILLKSGL-PQTLLAKIWNLADIDNDGELDKDEFALAMH   71 (96)
T ss_pred             CCHHHHHHHHHHHHHhCCC--CCCeEeHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            4555556666666666655  5666666666655544322 233345555555555555555555555443

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=98.90  E-value=1.3e-08  Score=64.94  Aligned_cols=64  Identities=25%  Similarity=0.295  Sum_probs=32.0

Q ss_pred             HHHHHHHHHhhcc-cCCCCCcccHHHHHHHHhc-CCC-CCH-HHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           47 IEALYELFKKISS-AVIDDGLINKEEFQLALFK-TNK-KES-LFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        47 i~~l~~~F~~~d~-~~~~~g~i~~~ef~~~l~~-~~~-~~~-~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      +..|...|+.+|+ +  ++|+|+..+|+.++.. .+. ... ..++.+++.+|.|++|.|+|+||..++.
T Consensus         7 i~~l~~~F~~fd~~~--~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~   74 (89)
T cd05022           7 IETLVSNFHKASVKG--GKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIG   74 (89)
T ss_pred             HHHHHHHHHHHhCCC--CCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            4455555555555 4  5555555555555544 221 112 3445555555555555555555554443

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=98.89  E-value=1e-08  Score=61.80  Aligned_cols=61  Identities=36%  Similarity=0.586  Sum_probs=51.3

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-----CHHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-----ESLFADRVFDLFDTKHNGILDFEEFARAL  111 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-----~~~~~~~lf~~~d~~~~g~i~~~ef~~~~  111 (178)
                      +|+..|..+|.+  ++|+|+.++|..++......     ....+..+|+.+|.+++|.|+|+||..++
T Consensus         1 ~l~~~F~~~D~d--~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    1 RLKEAFKKFDKD--GDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHHSTT--SSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             CHHHHHHHHcCC--ccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            478999999999  99999999999998774432     22346778999999999999999998764

...

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.87  E-value=2.6e-08  Score=76.24  Aligned_cols=103  Identities=21%  Similarity=0.287  Sum_probs=79.9

Q ss_pred             HHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC--CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChh
Q 030405           44 VSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK--KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPID  121 (178)
Q Consensus        44 ~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~--~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~  121 (178)
                      .+.+.+-..+|...|.+  ++|.++.++|..++.+-..  -....+..-+.-.|.|++|.|+++||+.-+..-..++..+
T Consensus       159 ~km~~rDe~rFk~AD~d--~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~ep  236 (325)
T KOG4223|consen  159 KKMIARDEERFKAADQD--GDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEP  236 (325)
T ss_pred             HHHHHHHHHHHhhcccC--CCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCc
Confidence            45678889999999999  9999999999998855221  1233467778889999999999999999776554321111


Q ss_pred             ----HHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405          122 ----DKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus       122 ----e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                          .+-...|...|+|++|+++.+|+.+.+
T Consensus       237 eWv~~Ere~F~~~~DknkDG~L~~dEl~~WI  267 (325)
T KOG4223|consen  237 EWVLTEREQFFEFRDKNKDGKLDGDELLDWI  267 (325)
T ss_pred             ccccccHHHHHHHhhcCCCCccCHHHHhccc
Confidence                223467888899999999999999887

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=98.84  E-value=2.7e-08  Score=63.54  Aligned_cols=66  Identities=15%  Similarity=0.112  Sum_probs=57.4

Q ss_pred             HHHHHHHHhc-CCCCcccHHHHHHHHHh-hCCCCChh-HHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh
Q 030405           87 ADRVFDLFDT-KHNGILDFEEFARALSI-FHPNSPID-DKIEFSFQLYDLKQQGFIERQEVKQMVVATLT  153 (178)
Q Consensus        87 ~~~lf~~~d~-~~~g~i~~~ef~~~~~~-~~~~~~~~-e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~  153 (178)
                      +..+|+.||. +++|.|+..||..++.. +.. .... +.+..+++.+|.|++|.|+++||..++..++.
T Consensus        10 l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~~   78 (89)
T cd05022          10 LVSNFHKASVKGGKESLTASEFQELLTQQLPH-LLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELAK   78 (89)
T ss_pred             HHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-hccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence            4689999999 99999999999999988 543 2344 78999999999999999999999999988744

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=98.82  E-value=4.7e-08  Score=63.08  Aligned_cols=67  Identities=21%  Similarity=0.489  Sum_probs=38.3

Q ss_pred             HHHHHHHHHHhhc-ccCCCCC-cccHHHHHHHHhc------CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           46 EIEALYELFKKIS-SAVIDDG-LINKEEFQLALFK------TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        46 ~i~~l~~~F~~~d-~~~~~~g-~i~~~ef~~~l~~------~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      .+..+.+.|+.+| .+  ++| +|+..+|+.++..      ........++.+++.+|.+++|.|+|+||+.++..+
T Consensus         8 a~~~~~~~F~~~dd~d--gdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l   82 (93)
T cd05026           8 AMDTLIRIFHNYSGKE--GDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (93)
T ss_pred             HHHHHHHHHHHHHccC--CCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            3555666666666 45  555 3777777666633      111233445666666666666666666666655443

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=98.79  E-value=1.4e-07  Score=74.47  Aligned_cols=130  Identities=21%  Similarity=0.225  Sum_probs=100.1

Q ss_pred             cchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHH
Q 030405            8 LKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFA   87 (178)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~   87 (178)
                      |..+|..|..+.++.+.-     .++.+...........-+.....|...|.+  ++|.++.++|+..+...    +..+
T Consensus        16 ~~~lf~~lD~~~~g~~d~-----~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~--~dg~vDy~eF~~Y~~~~----E~~l   84 (463)
T KOG0036|consen   16 IRCLFKELDSKNDGQVDL-----DQLEKGLEKLDHPKPNYEAAKMLFSAMDAN--RDGRVDYSEFKRYLDNK----ELEL   84 (463)
T ss_pred             HHHHHHHhccCCCCceeH-----HHHHHHHHhcCCCCCchHHHHHHHHhcccC--cCCcccHHHHHHHHHHh----HHHH
Confidence            445566666666665433     334332233333333445677788888888  99999999999988554    3445


Q ss_pred             HHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           88 DRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        88 ~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .++|...|.+++|.|+..|.-..+..+.- +..++++..+|+-.|+++++.|+.+|+++.+.
T Consensus        85 ~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi-~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~l  145 (463)
T KOG0036|consen   85 YRIFQSIDLEHDGKIDPNEIWRYLKDLGI-QLSDEKAAKFFEHMDKDGKATIDLEEWRDHLL  145 (463)
T ss_pred             HHHHhhhccccCCccCHHHHHHHHHHhCC-ccCHHHHHHHHHHhccCCCeeeccHHHHhhhh
Confidence            78999999999999999999999998887 57788999999999999999999999999873

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=98.77  E-value=8.5e-08  Score=61.18  Aligned_cols=63  Identities=25%  Similarity=0.431  Sum_probs=29.5

Q ss_pred             HHHHHHHHHhhc-ccCCCCC-cccHHHHHHHHhc-----CCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 030405           47 IEALYELFKKIS-SAVIDDG-LINKEEFQLALFK-----TNKK-ESLFADRVFDLFDTKHNGILDFEEFARAL  111 (178)
Q Consensus        47 i~~l~~~F~~~d-~~~~~~g-~i~~~ef~~~l~~-----~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~  111 (178)
                      +..|.+.|+.+| ++  ++| +|+..+|+.++..     .+.. ....++.+++.+|.+++|.|+|++|..++
T Consensus         7 ~~~l~~aF~~fD~~d--gdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li   77 (88)
T cd05027           7 MVALIDVFHQYSGRE--GDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFV   77 (88)
T ss_pred             HHHHHHHHHHhcccC--CCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            444555555554 44  455 3555555555543     2221 22334455555555555555555554443

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=98.75  E-value=9.2e-08  Score=55.90  Aligned_cols=61  Identities=21%  Similarity=0.351  Sum_probs=50.4

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      +..+|+.+|.+++|.|++++|..++..... ..+.+.+..+|+.+|.+++|.|+.++|..++
T Consensus         2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~   62 (63)
T cd00051           2 LREAFRLFDKDGDGTISADELKAALKSLGE-GLSEEEIDEMIREVDKDGDGKIDFEEFLELM   62 (63)
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence            356788888888899999999888887755 5667778889999999999999999987764

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=98.74  E-value=1.1e-07  Score=60.73  Aligned_cols=66  Identities=15%  Similarity=0.161  Sum_probs=57.5

Q ss_pred             HHHHHHHHh-cCCCC-cccHHHHHHHHHh-----hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh
Q 030405           87 ADRVFDLFD-TKHNG-ILDFEEFARALSI-----FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT  153 (178)
Q Consensus        87 ~~~lf~~~d-~~~~g-~i~~~ef~~~~~~-----~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~  153 (178)
                      +..+|+.+| .+++| .|+..++..++..     +.. ..+++.+..+++.+|.|++|.|+++||..++..++.
T Consensus        10 l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~-~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~~   82 (88)
T cd05027          10 LIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEE-IKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMVTT   82 (88)
T ss_pred             HHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence            578999998 78999 5999999999988     544 456778999999999999999999999999987644

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand

Probab=98.72  E-value=2e-08  Score=50.30  Aligned_cols=28  Identities=25%  Similarity=0.443  Sum_probs=24.5

Q ss_pred             HHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          123 KIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       123 ~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      +++.+|+.||+|++|+|+.+||..+|++
T Consensus         1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~   28 (29)
T PF00036_consen    1 ELKEAFREFDKDGDGKIDFEEFKEMMKK   28 (29)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred             CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence            3678999999999999999999998865

This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=98.72  E-value=8.2e-08  Score=55.45  Aligned_cols=50  Identities=28%  Similarity=0.445  Sum_probs=37.5

Q ss_pred             CCcccHHHHHHHHHhhCCCC-ChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           99 NGILDFEEFARALSIFHPNS-PIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        99 ~g~i~~~ef~~~~~~~~~~~-~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      +|.|+.++|..++..+.. . ..+++++.+|+.+|.|++|.|+.+||..++.
T Consensus         2 ~G~i~~~~~~~~l~~~g~-~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~   52 (54)
T PF13833_consen    2 DGKITREEFRRALSKLGI-KDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ   52 (54)
T ss_dssp             SSEEEHHHHHHHHHHTTS-SSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred             cCEECHHHHHHHHHHhCC-CCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence            577888888888855544 3 5566688888888888888888888887764

...

>smart00027 EH Eps15 homology domain

Probab=98.72  E-value=1.3e-07  Score=61.40  Aligned_cols=73  Identities=12%  Similarity=0.198  Sum_probs=61.5

Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhh-cCCCCCH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE-SGMNLSD  161 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~-~~~~l~~  161 (178)
                      .+..+|..+|.+++|.|+.+++..++...   +.+.+.+..+|+.+|.+++|.|+.+||..++..+.+. .|.+++.
T Consensus        11 ~l~~~F~~~D~d~~G~Is~~el~~~l~~~---~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~~~g~~~~~   84 (96)
T smart00027       11 KYEQIFRSLDKNQDGTVTGAQAKPILLKS---GLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKLNGYPIPA   84 (96)
T ss_pred             HHHHHHHHhCCCCCCeEeHHHHHHHHHHc---CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHHHcCCCCCc
Confidence            35789999999999999999999999774   3466789999999999999999999999999877443 3555554

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=98.72  E-value=1.3e-07  Score=56.84  Aligned_cols=61  Identities=16%  Similarity=0.243  Sum_probs=42.0

Q ss_pred             HHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           88 DRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        88 ~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      +.+|..+|.+++|.|+.+++..++....   .+.+.++.+|+.+|.+++|.|+.+||..++..+
T Consensus         2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g---~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~   62 (67)
T cd00052           2 DQIFRSLDPDGDGLISGDEARPFLGKSG---LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI   62 (67)
T ss_pred             hHHHHHhCCCCCCcCcHHHHHHHHHHcC---CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            3567777777777777777777665542   245567777777777777777777777776554

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=98.71  E-value=1.2e-07  Score=60.43  Aligned_cols=69  Identities=25%  Similarity=0.433  Sum_probs=47.5

Q ss_pred             HHHHHHHHHHHHhhcc--cCCCCCcccHHHHHHHHhc-CCC-----CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           44 VSEIEALYELFKKISS--AVIDDGLINKEEFQLALFK-TNK-----KESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        44 ~~~i~~l~~~F~~~d~--~~~~~g~i~~~ef~~~l~~-~~~-----~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      +++++.+...|..+|+  +  ++|.|+..+|..++.. .+.     ..+..+..++..+|.+++|.|+|++|+.++...
T Consensus         4 ~~~~~~l~~~F~~~D~~~~--~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~   80 (88)
T cd00213           4 EKAIETIIDVFHKYSGKEG--DKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL   80 (88)
T ss_pred             HHHHHHHHHHHHHHhhccC--CCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence            3466777778888877  7  7788888888777643 111     124557777777777777778888887766543

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=98.67  E-value=1.6e-07  Score=56.38  Aligned_cols=61  Identities=33%  Similarity=0.496  Sum_probs=52.8

Q ss_pred             HHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           51 YELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        51 ~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      +..|..+|++  ++|.|+..++..++...+. ....++.+|+.++.+++|.|+|++|+.++..+
T Consensus         2 ~~~F~~~D~~--~~G~i~~~el~~~l~~~g~-~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~   62 (67)
T cd00052           2 DQIFRSLDPD--GDGLISGDEARPFLGKSGL-PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI   62 (67)
T ss_pred             hHHHHHhCCC--CCCcCcHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            4678889999  9999999999999877654 56678999999999999999999999988654

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=98.66  E-value=2.4e-07  Score=59.20  Aligned_cols=68  Identities=28%  Similarity=0.424  Sum_probs=44.6

Q ss_pred             HHHHHHHHHHHh-hcccCCCCC-cccHHHHHHHHhcCC------CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           45 SEIEALYELFKK-ISSAVIDDG-LINKEEFQLALFKTN------KKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        45 ~~i~~l~~~F~~-~d~~~~~~g-~i~~~ef~~~l~~~~------~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ..+..|...|+. ++.+  ++| .|+..||+.++....      ......++.+++.+|.+++|.|+|+||+.++..+
T Consensus         6 ~~i~~l~~~F~~y~~~d--g~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l   81 (89)
T cd05023           6 RCIESLIAVFQKYAGKD--GDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL   81 (89)
T ss_pred             HHHHHHHHHHHHHhccC--CCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence            346777888877 5565  544 788888887775521      2233456777777777777777777777665543

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=98.66  E-value=3.2e-07  Score=59.17  Aligned_cols=66  Identities=14%  Similarity=0.079  Sum_probs=54.6

Q ss_pred             HHHHHHHHh-cCCCC-cccHHHHHHHHHhhC----CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           87 ADRVFDLFD-TKHNG-ILDFEEFARALSIFH----PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        87 ~~~lf~~~d-~~~~g-~i~~~ef~~~~~~~~----~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      +.++|..+| .+++| .|+..|+..++....    ........+..+++.+|.|++|.|+++||..++..++
T Consensus        12 ~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~   83 (93)
T cd05026          12 LIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT   83 (93)
T ss_pred             HHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence            467799999 67888 599999999986632    1133567899999999999999999999999998874

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=98.65  E-value=3.2e-07  Score=59.06  Aligned_cols=65  Identities=25%  Similarity=0.420  Sum_probs=35.7

Q ss_pred             HHHHHHHHHhhc-ccCCCCC-cccHHHHHHHHhc-CC-----CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           47 IEALYELFKKIS-SAVIDDG-LINKEEFQLALFK-TN-----KKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        47 i~~l~~~F~~~d-~~~~~~g-~i~~~ef~~~l~~-~~-----~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      +..+.+.|+.+| .+  ++| .|+..+|+.++.. .+     ......++.+++.+|.+++|.|+|++|+.++..
T Consensus         8 ~~~l~~~F~~fDd~d--g~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~   80 (92)
T cd05025           8 METLINVFHAHSGKE--GDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA   80 (92)
T ss_pred             HHHHHHHHHHHhccc--CCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            345666666664 66  666 3666666666532 11     112344556666666666666666666555443

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=98.65  E-value=3.7e-07  Score=58.23  Aligned_cols=66  Identities=20%  Similarity=0.332  Sum_probs=36.3

Q ss_pred             HHHHHHHHHHhhcc-cCCC-CCcccHHHHHHHHhc----CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           46 EIEALYELFKKISS-AVID-DGLINKEEFQLALFK----TNKKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        46 ~i~~l~~~F~~~d~-~~~~-~g~i~~~ef~~~l~~----~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      .+..|...|++++. +  + +|+|+..+|+.++..    ........+..+++.+|.+++|.|+|++|...+..
T Consensus         8 ~~~~~i~~F~~y~~~~--~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~   79 (88)
T cd05029           8 AIGLLVAIFHKYSGRE--GDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA   79 (88)
T ss_pred             HHHHHHHHHHHHHccC--CCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            34555666666654 2  3 456666666666631    12223444566666666666666666666555543

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=98.64  E-value=3.2e-07  Score=59.27  Aligned_cols=62  Identities=21%  Similarity=0.457  Sum_probs=29.2

Q ss_pred             HHHHHHHHhhcc-cCCC-CCcccHHHHHHHHhc-C----C-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 030405           48 EALYELFKKISS-AVID-DGLINKEEFQLALFK-T----N-KKESLFADRVFDLFDTKHNGILDFEEFARAL  111 (178)
Q Consensus        48 ~~l~~~F~~~d~-~~~~-~g~i~~~ef~~~l~~-~----~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~  111 (178)
                      ..++..|..+|. +  + +|.|+..++..++.. .    + ......++.+++.+|.+++|.|+|++|+.++
T Consensus         8 ~~l~~~F~~~D~~d--g~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~   77 (94)
T cd05031           8 ESLILTFHRYAGKD--GDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLV   77 (94)
T ss_pred             HHHHHHHHHHhccC--CCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            445555555553 4  4 355555555555432 0    1 1122334455555555555555555555444

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=98.63  E-value=4.1e-07  Score=58.52  Aligned_cols=68  Identities=18%  Similarity=0.152  Sum_probs=56.3

Q ss_pred             HHHHHHHHHh-cCCCC-cccHHHHHHHHHh-hC---CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh
Q 030405           86 FADRVFDLFD-TKHNG-ILDFEEFARALSI-FH---PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT  153 (178)
Q Consensus        86 ~~~~lf~~~d-~~~~g-~i~~~ef~~~~~~-~~---~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~  153 (178)
                      .+.++|..+| .+++| .|+..++..++.. +.   ....+.+.+..+|+.+|.|++|.|+.+||..++..++.
T Consensus        10 ~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~~   83 (92)
T cd05025          10 TLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTV   83 (92)
T ss_pred             HHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHH
Confidence            3578999997 99999 5999999999975 31   11235678999999999999999999999999987643

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]

Probab=98.61  E-value=8.5e-07  Score=63.76  Aligned_cols=126  Identities=17%  Similarity=0.198  Sum_probs=95.5

Q ss_pred             CccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCH-HHHHHHHHHHhcCC
Q 030405           20 DADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES-LFADRVFDLFDTKH   98 (178)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~-~~~~~lf~~~d~~~   98 (178)
                      .+...+..++..-+.-+.....|+.++|+.+...|..+|.+  .+|+|+..+++-++.+.+.+.+ .-++.+....|.|.
T Consensus        71 ~~~~~~~r~s~kv~n~yteF~eFsrkqIk~~~~~Fk~yDe~--rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~  148 (244)
T KOG0041|consen   71 QGAGVPSRDSLKVFNVYTEFSEFSRKQIKDAESMFKQYDED--RDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDF  148 (244)
T ss_pred             cccCCcccccccccchhhhhhHHHHHHHHHHHHHHHHhccc--ccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhccc
Confidence            33344444444555556677789999999999999999999  9999999999999988776655 34688999999999


Q ss_pred             CCcccHHHHHHHHHhhCCCCCh-hHHHHHHHHh--hCCCCCCceeHHHHHHH
Q 030405           99 NGILDFEEFARALSIFHPNSPI-DDKIEFSFQL--YDLKQQGFIERQEVKQM  147 (178)
Q Consensus        99 ~g~i~~~ef~~~~~~~~~~~~~-~e~~~~~F~~--~D~d~~G~I~~~e~~~~  147 (178)
                      +|+|+|.+|+.++......... ++.+..+=+.  .|+...|+.....|-..
T Consensus       149 dgklSfreflLIfrkaaagEL~~ds~~~~LAr~~eVDVskeGV~GAknFFeA  200 (244)
T KOG0041|consen  149 DGKLSFREFLLIFRKAAAGELQEDSGLLRLARLSEVDVSKEGVSGAKNFFEA  200 (244)
T ss_pred             ccchhHHHHHHHHHHHhccccccchHHHHHHHhcccchhhhhhhhHHHHHHH
Confidence            9999999999988765542222 2334344344  79999998888876554

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=98.61  E-value=3.4e-07  Score=59.18  Aligned_cols=64  Identities=11%  Similarity=0.130  Sum_probs=54.2

Q ss_pred             HHHHHHHHhc-CC-CCcccHHHHHHHHHh-----hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           87 ADRVFDLFDT-KH-NGILDFEEFARALSI-----FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        87 ~~~lf~~~d~-~~-~g~i~~~ef~~~~~~-----~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      +..+|..+|. ++ +|.|+..|+..++..     +.. ..+.+.+..+|+.+|.+++|.|+.+||..++..+
T Consensus        10 l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~-~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~   80 (94)
T cd05031          10 LILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKN-QKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL   80 (94)
T ss_pred             HHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhc-cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            5789999997 86 699999999998875     222 3456789999999999999999999999998764

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=98.58  E-value=3.1e-06  Score=58.46  Aligned_cols=128  Identities=16%  Similarity=0.184  Sum_probs=98.3

Q ss_pred             cchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCCCC
Q 030405            8 LKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKE   83 (178)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~~~   83 (178)
                      ++.+|.....++++.+-+     ++++......+  .+.++   |-..+..      ..|.|++.-|..++..  .+..+
T Consensus        34 fKEAF~~mDqnrDG~Idk-----eDL~d~~aSlGk~~~d~e---lDaM~~E------a~gPINft~FLTmfGekL~gtdp   99 (171)
T KOG0031|consen   34 FKEAFNLMDQNRDGFIDK-----EDLRDMLASLGKIASDEE---LDAMMKE------APGPINFTVFLTMFGEKLNGTDP   99 (171)
T ss_pred             HHHHHHHHhccCCCcccH-----HHHHHHHHHcCCCCCHHH---HHHHHHh------CCCCeeHHHHHHHHHHHhcCCCH
Confidence            345566666666666666     67766555433  23333   3334433      5789999999998855  55666


Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      +..+-..|+.||.+++|.|.-+.++.++..... .-.++++..+|+.+-.|..|.|++..|..+|..
T Consensus       100 e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gD-r~~~eEV~~m~r~~p~d~~G~~dy~~~~~~ith  165 (171)
T KOG0031|consen  100 EEVILNAFKTFDDEGSGKIDEDYLRELLTTMGD-RFTDEEVDEMYREAPIDKKGNFDYKAFTYIITH  165 (171)
T ss_pred             HHHHHHHHHhcCccCCCccCHHHHHHHHHHhcc-cCCHHHHHHHHHhCCcccCCceeHHHHHHHHHc
Confidence            777889999999999999999999999998766 567889999999999999999999999999853

>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]

Probab=98.57  E-value=1.4e-06  Score=77.90  Aligned_cols=123  Identities=15%  Similarity=0.294  Sum_probs=97.2

Q ss_pred             hhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC--------CHHHHHHHHHHHhcCCCCcccHHHHHH
Q 030405           38 RETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK--------ESLFADRVFDLFDTKHNGILDFEEFAR  109 (178)
Q Consensus        38 ~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~--------~~~~~~~lf~~~d~~~~g~i~~~ef~~  109 (178)
                      ..++.|++++..+.-+|+-||++  .+|+++..+|..||...+..        +++..+.++..+|++.+|.|+..+|..
T Consensus      2243 n~~GVtEe~L~EFs~~fkhFDke--k~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~a 2320 (2399)
T KOG0040|consen 2243 NHNGVTEEQLKEFSMMFKHFDKE--KNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMA 2320 (2399)
T ss_pred             ccCCCCHHHHHHHHHHHHHhchh--hccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHH
Confidence            34688999999999999999999  99999999999999774432        345789999999999999999999999


Q ss_pred             HHHh-hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhh
Q 030405          110 ALSI-FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSL  174 (178)
Q Consensus       110 ~~~~-~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~  174 (178)
                      +|.. -+.+-...+.+..+|+.+|. +..+|+.+++.+-           ++.++.+-++.+|-..
T Consensus      2321 fmi~~ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~~~-----------ltreqaefc~s~m~~~ 2374 (2399)
T KOG0040|consen 2321 FMISKETENILSSEEIEDAFRALDA-GKPYVTKEELYQN-----------LTREQAEFCMSKMKPY 2374 (2399)
T ss_pred             HHHhcccccccchHHHHHHHHHhhc-CCccccHHHHHhc-----------CCHHHHHHHHHHhhhh
Confidence            8764 33333455689999999998 8889999987543           4555555555554433

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=98.57  E-value=6.5e-07  Score=57.10  Aligned_cols=66  Identities=14%  Similarity=0.093  Sum_probs=55.4

Q ss_pred             HHHHHHHhc-CC-CCcccHHHHHHHHHh---hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhh
Q 030405           88 DRVFDLFDT-KH-NGILDFEEFARALSI---FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE  154 (178)
Q Consensus        88 ~~lf~~~d~-~~-~g~i~~~ef~~~~~~---~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~  154 (178)
                      -.+|..++. ++ +|.|+.+||..++..   +.. ..+.+.+..+|+.+|.|++|.|+++||..++..++.+
T Consensus        13 i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~-k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~~~   83 (88)
T cd05029          13 VAIFHKYSGREGDKNTLSKKELKELIQKELTIGS-KLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALALI   83 (88)
T ss_pred             HHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHH
Confidence            467888988 56 789999999999974   333 4577899999999999999999999999999877443

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=98.56  E-value=4.4e-07  Score=60.78  Aligned_cols=59  Identities=24%  Similarity=0.262  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ..+...|..+|.|++|.|+..|+..+.  +   ...+..+..+|+.+|.|++|.||.+||..++
T Consensus        48 ~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l---~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl  106 (116)
T cd00252          48 DPVGWMFNQLDGNYDGKLSHHELAPIR--L---DPNEHCIKPFFESCDLDKDGSISLDEWCYCF  106 (116)
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHH--c---cchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            446789999999999999999998765  2   3446778899999999999999999999988

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]

Probab=98.53  E-value=1.3e-06  Score=69.94  Aligned_cols=120  Identities=23%  Similarity=0.361  Sum_probs=90.8

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHH----HhcCCCCcccHHHHHHHHHhhCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDL----FDTKHNGILDFEEFARALSIFHP  116 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~----~d~~~~g~i~~~ef~~~~~~~~~  116 (178)
                      .|+-+....++-.|-.+|.+  ++|.|+++++...-  .+.-.+..++++|..    +-...+|.++|++|+.++-.+..
T Consensus       271 ~FS~e~f~viy~kFweLD~D--hd~lidk~~L~ry~--d~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~  346 (493)
T KOG2562|consen  271 YFSYEHFYVIYCKFWELDTD--HDGLIDKEDLKRYG--DHTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEED  346 (493)
T ss_pred             heeHHHHHHHHHHHhhhccc--cccccCHHHHHHHh--ccchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhcc
Confidence            35666667777889899999  99999999998533  223336678999993    33345789999999998887766


Q ss_pred             CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh---hcC-CCCCHHHHH
Q 030405          117 NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT---ESG-MNLSDDVIE  165 (178)
Q Consensus       117 ~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~---~~~-~~l~~~~~~  165 (178)
                       ......+..+|+.+|.+++|.|+..|++.+....++   ..| ++++-+++-
T Consensus       347 -k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l  398 (493)
T KOG2562|consen  347 -KDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALPFEDAL  398 (493)
T ss_pred             -CCCccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHHHH
Confidence             566778999999999999999999999988876544   333 345544433

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=98.50  E-value=8e-07  Score=56.62  Aligned_cols=65  Identities=17%  Similarity=0.209  Sum_probs=54.5

Q ss_pred             HHHHHHHHhc--CCCCcccHHHHHHHHHhhCCC----CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           87 ADRVFDLFDT--KHNGILDFEEFARALSIFHPN----SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        87 ~~~lf~~~d~--~~~g~i~~~ef~~~~~~~~~~----~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      +..+|..+|.  +++|.|+..+|..++......    ....+.+..+++.+|.+++|.|+.++|..++..+
T Consensus        10 l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~   80 (88)
T cd00213          10 IIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL   80 (88)
T ss_pred             HHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence            5778999999  899999999999998752211    1246789999999999999999999999998765

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=98.50  E-value=1.4e-06  Score=69.47  Aligned_cols=120  Identities=15%  Similarity=0.153  Sum_probs=82.0

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhc-CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC---------
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS---------  118 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~---------  118 (178)
                      .|.+.|...|+.  .+|+++.+++..++.. .++... +----=+....+.+|.+.|.+....+..-.-..         
T Consensus       465 dL~~eF~~~D~~--ksG~lsis~Wa~~mE~i~~L~LP-Wr~L~~kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvet  541 (631)
T KOG0377|consen  465 DLEDEFRKYDPK--KSGKLSISHWAKCMENITGLNLP-WRLLRPKLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVET  541 (631)
T ss_pred             HHHHHHHhcChh--hcCeeeHHHHHHHHHHHhcCCCc-HHHhhhhccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHHH
Confidence            466789999988  9999999999999866 222221 111122334456677888887765543211000         


Q ss_pred             --ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          119 --PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       119 --~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                        .....+..+|+.+|.|++|.|+.+||+++.+-+-.++.-+++..++.++++.|
T Consensus       542 LYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~m  596 (631)
T KOG0377|consen  542 LYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSM  596 (631)
T ss_pred             HHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhh
Confidence              01234677999999999999999999999888766666788888887776654

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.47  E-value=1.4e-06  Score=66.98  Aligned_cols=122  Identities=20%  Similarity=0.271  Sum_probs=86.6

Q ss_pred             HHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC------CCC
Q 030405           47 IEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHP------NSP  119 (178)
Q Consensus        47 i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~------~~~  119 (178)
                      -.++...+..+|.+  ++|.|+..++..++..... .....+.+-+..+|.+.+|.|+|+++...+.....      ...
T Consensus        76 ~~rl~~l~~~iD~~--~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e  153 (325)
T KOG4223|consen   76 QERLGKLVPKIDSD--SDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEE  153 (325)
T ss_pred             HHHHHHHHhhhcCC--CCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccch
Confidence            46788888888877  8999999999998755221 11234577788899999999999999987764210      000


Q ss_pred             hhH-------HHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhccC
Q 030405          120 IDD-------KIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQL  177 (178)
Q Consensus       120 ~~e-------~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~D~  177 (178)
                      ..+       .-..-|+..|.|++|.++++||..+|       .++-.+.-..-++++.+.++|.
T Consensus       154 ~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFL-------HPEe~p~M~~iVi~Etl~d~Dk  211 (325)
T KOG4223|consen  154 DNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFL-------HPEEHPHMKDIVIAETLEDIDK  211 (325)
T ss_pred             hcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhcc-------ChhhcchHHHHHHHHHHhhccc
Confidence            001       13457999999999999999999997       4333344444567777777663

>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]

Probab=98.46  E-value=1.3e-06  Score=59.74  Aligned_cols=97  Identities=16%  Similarity=0.316  Sum_probs=76.6

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHH--
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKI--  124 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~--  124 (178)
                      ++-..|   +.+  |.|.++..+|..++.-  ...+....+.-.|+.+|.++++.|.-.++...+..+.+.+..++++  
T Consensus        75 ri~e~F---SeD--G~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~  149 (189)
T KOG0038|consen   75 RICEVF---SED--GRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVEL  149 (189)
T ss_pred             HHHHHh---ccC--CCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHH
Confidence            344444   445  8999999999998644  1222234467789999999999999999999999999877777765  


Q ss_pred             --HHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          125 --EFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       125 --~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                        .++....|.||+|.|+..||..++.+
T Consensus       150 i~ekvieEAD~DgDgkl~~~eFe~~i~r  177 (189)
T KOG0038|consen  150 ICEKVIEEADLDGDGKLSFAEFEHVILR  177 (189)
T ss_pred             HHHHHHHHhcCCCCCcccHHHHHHHHHh
Confidence              45677889999999999999999854

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=98.46  E-value=9.5e-07  Score=50.90  Aligned_cols=51  Identities=37%  Similarity=0.556  Sum_probs=43.0

Q ss_pred             CCCcccHHHHHHHHhcCCC--CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           63 DDGLINKEEFQLALFKTNK--KESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        63 ~~g~i~~~ef~~~l~~~~~--~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      ++|.|+.++|..++...+.  .....+..+|..+|.+++|.|+|+||+.++..
T Consensus         1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~   53 (54)
T PF13833_consen    1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR   53 (54)
T ss_dssp             SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred             CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence            3699999999999965433  45566899999999999999999999998753

...

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=98.44  E-value=2.3e-06  Score=54.70  Aligned_cols=67  Identities=16%  Similarity=0.140  Sum_probs=54.0

Q ss_pred             HHHHHHH-HhcCCCC-cccHHHHHHHHHhhC----CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh
Q 030405           87 ADRVFDL-FDTKHNG-ILDFEEFARALSIFH----PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT  153 (178)
Q Consensus        87 ~~~lf~~-~d~~~~g-~i~~~ef~~~~~~~~----~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~  153 (178)
                      +..+|.. ++.+++| .|+.+||..++....    ........+..+++.+|.|++|.|+++||..++..+..
T Consensus        11 l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~~   83 (89)
T cd05023          11 LIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLAV   83 (89)
T ss_pred             HHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence            3567888 6677765 999999999998652    22344578999999999999999999999999988743

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=98.44  E-value=1.8e-06  Score=57.79  Aligned_cols=64  Identities=13%  Similarity=0.220  Sum_probs=55.0

Q ss_pred             CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 030405           43 SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARAL  111 (178)
Q Consensus        43 ~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~  111 (178)
                      .+.....+.-.|..+|.+  ++|.|+.+|+..+.   ....+..+..+|..+|.|++|.||++||..++
T Consensus        43 ~~~~~~~l~w~F~~lD~d--~DG~Ls~~EL~~~~---l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl  106 (116)
T cd00252          43 YPMCKDPVGWMFNQLDGN--YDGKLSHHELAPIR---LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF  106 (116)
T ss_pred             hHHHHHHHHHHHHHHCCC--CCCcCCHHHHHHHH---ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            456678899999999999  99999999999876   22334557899999999999999999999988

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10

Probab=98.43  E-value=3.1e-06  Score=53.88  Aligned_cols=68  Identities=18%  Similarity=0.406  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc------CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 030405           45 SEIEALYELFKKISSAVIDDGLINKEEFQLALFK------TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFH  115 (178)
Q Consensus        45 ~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~------~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~  115 (178)
                      ..+.-|...|+.++.   ..+.+++.||+.++..      ........++.+++..|.|+||.|+|.||..++..+.
T Consensus         5 ~ai~~lI~~FhkYaG---~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~   78 (91)
T cd05024           5 HSMEKMMLTFHKFAG---EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLL   78 (91)
T ss_pred             HHHHHHHHHHHHHcC---CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            456778889998874   3568999999998754      2233456688899999999999999999988776553

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=98.41  E-value=2.4e-06  Score=54.51  Aligned_cols=67  Identities=27%  Similarity=0.392  Sum_probs=31.5

Q ss_pred             HHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-CCC-C----CHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           46 EIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNK-K----ESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~-~----~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      .+..+...|+.++...+.+|.|+..+|..++.. .+. .    ....++.+|+.+|.+++|.|+|++|+.++.
T Consensus         6 ~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~   78 (88)
T cd05030           6 AIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVI   78 (88)
T ss_pred             HHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHH
Confidence            345555666655533112456666666665532 110 1    133344455555555555555555544443

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=98.40  E-value=1.9e-06  Score=50.12  Aligned_cols=60  Identities=28%  Similarity=0.409  Sum_probs=50.4

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARAL  111 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~  111 (178)
                      +...|..+|.+  ++|.|+..+|..++...+ ......+..+|..++.+++|.|++++|..++
T Consensus         2 ~~~~f~~~d~~--~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~   62 (63)
T cd00051           2 LREAFRLFDKD--GDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM   62 (63)
T ss_pred             HHHHHHHhCCC--CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence            56778888988  999999999999987743 4445667899999999999999999998764

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>PF14658 EF-hand_9: EF-hand domain

Probab=98.39  E-value=1.7e-06  Score=51.50  Aligned_cols=62  Identities=18%  Similarity=0.288  Sum_probs=52.6

Q ss_pred             HHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCC-CceeHHHHHHHHHH
Q 030405           89 RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQ-GFIERQEVKQMVVA  150 (178)
Q Consensus        89 ~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~-G~I~~~e~~~~l~~  150 (178)
                      ..|..||.++.|.|...+++.++.........+++++.+.+.+|.++. |.|+.++|..+|+.
T Consensus         2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~   64 (66)
T PF14658_consen    2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD   64 (66)
T ss_pred             cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence            468889999999999999999888888756677888999999999988 99999999888754

>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B

Probab=98.36  E-value=6.9e-07  Score=45.48  Aligned_cols=27  Identities=22%  Similarity=0.636  Sum_probs=24.0

Q ss_pred             HHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405          123 KIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus       123 ~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      +++.+|+.||.|++|+|+.+||..+|.
T Consensus         1 ~l~~~F~~~D~d~dG~I~~~el~~~l~   27 (31)
T PF13405_consen    1 RLREAFKMFDKDGDGFIDFEELRAILR   27 (31)
T ss_dssp             HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred             CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            468899999999999999999999997

...

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=98.31  E-value=4.4e-06  Score=53.27  Aligned_cols=66  Identities=23%  Similarity=0.263  Sum_probs=52.8

Q ss_pred             HHHHHHHhcC--CCCcccHHHHHHHHHhhCCCCCh----hHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh
Q 030405           88 DRVFDLFDTK--HNGILDFEEFARALSIFHPNSPI----DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT  153 (178)
Q Consensus        88 ~~lf~~~d~~--~~g~i~~~ef~~~~~~~~~~~~~----~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~  153 (178)
                      -..|..++..  .+|.|+..+|..++........+    ++.+..+|+.+|.+++|.|+++||..++..++.
T Consensus        11 ~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~~   82 (88)
T cd05030          11 INVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVGV   82 (88)
T ss_pred             HHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence            4678888765  46899999999999743321222    688999999999999999999999999987643

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A

Probab=98.26  E-value=1.7e-06  Score=41.67  Aligned_cols=25  Identities=28%  Similarity=0.488  Sum_probs=21.2

Q ss_pred             HHHHHHhhCCCCCCceeHHHHHHHH
Q 030405          124 IEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus       124 ~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ++.+|+.+|.|++|.|+.+||.+++
T Consensus         1 l~~~F~~~D~d~DG~is~~E~~~~~   25 (25)
T PF13202_consen    1 LKDAFQQFDTDGDGKISFEEFQRLV   25 (25)
T ss_dssp             HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred             CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence            4578999999999999999998764

...

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand

Probab=98.18  E-value=3.4e-06  Score=42.17  Aligned_cols=27  Identities=33%  Similarity=0.619  Sum_probs=22.6

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      ++.+|+.+|.|++|.|+++||..++..
T Consensus         2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~   28 (29)
T PF00036_consen    2 LKEAFREFDKDGDGKIDFEEFKEMMKK   28 (29)
T ss_dssp             HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence            577889999999999999999888764

This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....

>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A

Probab=98.16  E-value=7.5e-06  Score=53.75  Aligned_cols=69  Identities=26%  Similarity=0.465  Sum_probs=52.0

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ++++|.......|..+++   .+|.|+-.+...++.+.++.. ..+..++...|.+++|.++++||+.++..+
T Consensus         4 ls~~e~~~y~~~F~~l~~---~~g~isg~~a~~~f~~S~L~~-~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li   72 (104)
T PF12763_consen    4 LSPEEKQKYDQIFQSLDP---QDGKISGDQAREFFMKSGLPR-DVLAQIWNLADIDNDGKLDFEEFAIAMHLI   72 (104)
T ss_dssp             -SCCHHHHHHHHHHCTSS---STTEEEHHHHHHHHHHTTSSH-HHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhcCC---CCCeEeHHHHHHHHHHcCCCH-HHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence            566778888888888775   478888888888777766554 456888888888888888888888777644

...

>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional

Probab=98.05  E-value=1.6e-05  Score=63.93  Aligned_cols=56  Identities=27%  Similarity=0.418  Sum_probs=48.7

Q ss_pred             CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           83 ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        83 ~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      ....+..+|+.+|.+++|.|+++||..              ...+|..+|.|++|.|+.+||..++..++
T Consensus       332 ~~~~l~~aF~~~D~dgdG~Is~~E~~~--------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~~  387 (391)
T PRK12309        332 FTHAAQEIFRLYDLDGDGFITREEWLG--------------SDAVFDALDLNHDGKITPEEMRAGLGAAL  387 (391)
T ss_pred             hhHHHHHHHHHhCCCCCCcCcHHHHHH--------------HHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence            345678899999999999999999942              46789999999999999999999998764

>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]

Probab=98.05  E-value=2.6e-05  Score=62.29  Aligned_cols=104  Identities=17%  Similarity=0.369  Sum_probs=71.1

Q ss_pred             HHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-CCCC---CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCh--
Q 030405           47 IEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKK---ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI--  120 (178)
Q Consensus        47 i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~~---~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~--  120 (178)
                      .+-+.--|..+|+.  .+|.|+..+|..++.. ....   .....+++-+.++..+.| |+++||...+..+..-.+.  
T Consensus       317 ~Eil~lEF~~~~~~--~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~~~g-ISl~Ef~~Ff~Fl~~l~dfd~  393 (489)
T KOG2643|consen  317 EEILELEFERFDKG--DSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDDGKG-ISLQEFKAFFRFLNNLNDFDI  393 (489)
T ss_pred             HHHHHHHHHHhCcc--cccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCCCCC-cCHHHHHHHHHHHhhhhHHHH
Confidence            34566788889987  7799999999988644 2222   223456777777776444 9999998776533211100  


Q ss_pred             -------------hH-----------------HHHHHHHhhCCCCCCceeHHHHHHHHHHHHh
Q 030405          121 -------------DD-----------------KIEFSFQLYDLKQQGFIERQEVKQMVVATLT  153 (178)
Q Consensus       121 -------------~e-----------------~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~  153 (178)
                                   ..                 -+.-+|.+||.|+||.|+.+||..+|+.=++
T Consensus       394 Al~fy~~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~Rmh  456 (489)
T KOG2643|consen  394 ALRFYHMAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENNDGTLSHKEFLAVMKRRMH  456 (489)
T ss_pred             HHHHHHHcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCCCCcccHHHHHHHHHHHhh
Confidence                         01                 1223689999999999999999999986443

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=98.02  E-value=0.00011  Score=50.06  Aligned_cols=132  Identities=12%  Similarity=0.086  Sum_probs=91.3

Q ss_pred             ccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHH--HHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC---C
Q 030405            7 GLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSE--IEALYELFKKISSAVIDDGLINKEEFQLALFKTN---K   81 (178)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~---~   81 (178)
                      -++.+|..+..+.++++..     .++....+..+.++.+  +.+....+..- .-  +...+++++|..++++..   .
T Consensus        12 e~ke~F~lfD~~gD~ki~~-----~q~gdvlRalG~nPT~aeV~k~l~~~~~~-~~--~~~rl~FE~fLpm~q~vaknk~   83 (152)
T KOG0030|consen   12 EFKEAFLLFDRTGDGKISG-----SQVGDVLRALGQNPTNAEVLKVLGQPKRR-EM--NVKRLDFEEFLPMYQQVAKNKD   83 (152)
T ss_pred             HHHHHHHHHhccCcccccH-----HHHHHHHHHhcCCCcHHHHHHHHcCcccc-hh--hhhhhhHHHHHHHHHHHHhccc
Confidence            3567777888888888776     7777777776665544  33332222211 00  236799999988876621   1


Q ss_pred             CC-HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           82 KE-SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        82 ~~-~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      .. -...-+-++.||+.++|.|...|+++++..+.. .-.++++..+..-- .|.+|.|.+++|.+-+
T Consensus        84 q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGe-kl~eeEVe~Llag~-eD~nG~i~YE~fVk~i  149 (152)
T KOG0030|consen   84 QGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGE-KLTEEEVEELLAGQ-EDSNGCINYEAFVKHI  149 (152)
T ss_pred             cCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHh-hccHHHHHHHHccc-cccCCcCcHHHHHHHH
Confidence            11 122345678899999999999999999999987 56777777776665 5788999999988765

>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]

Probab=97.98  E-value=0.00014  Score=59.17  Aligned_cols=104  Identities=18%  Similarity=0.322  Sum_probs=76.9

Q ss_pred             CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCCCCHHHH-HHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 030405           43 SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFA-DRVFDLFDTKHNGILDFEEFARALSIFHPNSP  119 (178)
Q Consensus        43 ~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~~~~~~~-~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~  119 (178)
                      .+.+++.+.-.|...+.+  +..+++.++|......  .....++.. .-+=...|..+||-|+|+||...-..++   .
T Consensus        31 ~~~eLr~if~~~as~e~~--ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~lC---~  105 (694)
T KOG0751|consen   31 DPKELRSIFLKYASIEKN--GESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKDGLISFQEFRAFESVLC---A  105 (694)
T ss_pred             ChHHHHHHHHHHhHHhhc--cccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcccccccHHHHHHHHhhcc---C
Confidence            455666666666667777  7778999999876433  222233333 3344455777899999999998766654   4


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ++.....+|+.||+.++|.++.+++.+++.++
T Consensus       106 pDal~~~aFqlFDr~~~~~vs~~~~~~if~~t  137 (694)
T KOG0751|consen  106 PDALFEVAFQLFDRLGNGEVSFEDVADIFGQT  137 (694)
T ss_pred             chHHHHHHHHHhcccCCCceehHHHHHHHhcc
Confidence            67778899999999999999999999998765

>PLN02964 phosphatidylserine decarboxylase

Probab=97.97  E-value=7.2e-05  Score=63.59  Aligned_cols=97  Identities=11%  Similarity=0.107  Sum_probs=72.1

Q ss_pred             ccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC---CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CC
Q 030405            7 GLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV---FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KK   82 (178)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~   82 (178)
                      .++.+|..+..+..+.+         +..+....+   .+..+...+...|..+|.+  ++|.|+..+|..++...+ ..
T Consensus       144 elkeaF~lfD~dgdG~i---------Lg~ilrslG~~~pte~e~~fi~~mf~~~D~D--gdG~IdfdEFl~lL~~lg~~~  212 (644)
T PLN02964        144 SACESFDLLDPSSSNKV---------VGSIFVSCSIEDPVETERSFARRILAIVDYD--EDGQLSFSEFSDLIKAFGNLV  212 (644)
T ss_pred             HHHHHHHHHCCCCCCcC---------HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCC--CCCeEcHHHHHHHHHHhccCC
Confidence            34555565555554442         555555544   3455556689999999999  999999999999886633 23


Q ss_pred             CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           83 ESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        83 ~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ....+..+|+.+|.+++|.|+++||..++...
T Consensus       213 seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~  244 (644)
T PLN02964        213 AANKKEELFKAADLNGDGVVTIDELAALLALQ  244 (644)
T ss_pred             CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence            45668999999999999999999999988763

>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10

Probab=97.86  E-value=0.00018  Score=45.86  Aligned_cols=65  Identities=14%  Similarity=0.156  Sum_probs=51.6

Q ss_pred             HHHHHHHhcCCCCcccHHHHHHHHH----hhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh
Q 030405           88 DRVFDLFDTKHNGILDFEEFARALS----IFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT  153 (178)
Q Consensus        88 ~~lf~~~d~~~~g~i~~~ef~~~~~----~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~  153 (178)
                      -.+|..+..+ .+.++..||..++.    .+..+......+..+++..|.|+||.|+..||..++..++.
T Consensus        11 I~~FhkYaG~-~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~~   79 (91)
T cd05024          11 MLTFHKFAGE-KNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLLI   79 (91)
T ss_pred             HHHHHHHcCC-CCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence            3467777743 56899999999885    33343455678999999999999999999999999988743

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>KOG4251 consensus Calcium binding protein [General function prediction only]

Probab=97.86  E-value=6.7e-05  Score=55.87  Aligned_cols=120  Identities=13%  Similarity=0.177  Sum_probs=82.1

Q ss_pred             HHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC----CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC---
Q 030405           47 IEALYELFKKISSAVIDDGLINKEEFQLALFKTN----KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP---  119 (178)
Q Consensus        47 i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~----~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~---  119 (178)
                      .+.|..+|.+.|.+  .+++|+..++..++....    .......+.-|+..|.+++|.|+|+||..-+........   
T Consensus       100 rrklmviFsKvDVN--tDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekev  177 (362)
T KOG4251|consen  100 RRKLMVIFSKVDVN--TDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEV  177 (362)
T ss_pred             HHHHHHHHhhcccC--ccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHH
Confidence            46788999999998  899999999998874411    011122356799999999999999999765543322100   


Q ss_pred             -----------hhHHHHHHHHhhCCCCCCceeH---------HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhcc
Q 030405          120 -----------IDDKIEFSFQLYDLKQQGFIER---------QEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQ  176 (178)
Q Consensus       120 -----------~~e~~~~~F~~~D~d~~G~I~~---------~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~D  176 (178)
                                 .+++ .+.|..-+++..|..+.         +||..+|       .++.|..-+..++++++...|
T Consensus       178 adairlneelkVDeE-tqevlenlkdRwyqaDsppadlllteeEflsFL-------HPEhSrgmLrfmVkeivrdlD  246 (362)
T KOG4251|consen  178 ADAIRLNEELKVDEE-TQEVLENLKDRWYQADSPPADLLLTEEEFLSFL-------HPEHSRGMLRFMVKEIVRDLD  246 (362)
T ss_pred             HHHhhccCcccccHH-HHHHHHhhhhhhccccCchhhhhhhHHHHHHHc-------ChHhhhhhHHHHHHHHHHHhc
Confidence                       0111 22344445566665555         8888876       567788888888988888766

>PF14658 EF-hand_9: EF-hand domain

Probab=97.84  E-value=9.8e-05  Score=44.02  Aligned_cols=59  Identities=14%  Similarity=0.238  Sum_probs=51.1

Q ss_pred             HHHhhcccCCCCCcccHHHHHHHHhcC-C-CCCHHHHHHHHHHHhcCCC-CcccHHHHHHHHHh
Q 030405           53 LFKKISSAVIDDGLINKEEFQLALFKT-N-KKESLFADRVFDLFDTKHN-GILDFEEFARALSI  113 (178)
Q Consensus        53 ~F~~~d~~~~~~g~i~~~ef~~~l~~~-~-~~~~~~~~~lf~~~d~~~~-g~i~~~ef~~~~~~  113 (178)
                      +|+.+|++  +.|.|...++..+|... . .+.+..++.+.+.+|+++. |.|+++.|..++..
T Consensus         3 ~F~~fD~~--~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~   64 (66)
T PF14658_consen    3 AFDAFDTQ--KTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD   64 (66)
T ss_pred             chhhcCCc--CCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence            68889998  99999999999999873 2 4556778999999999988 99999999998864

>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A

Probab=97.75  E-value=0.00019  Score=40.39  Aligned_cols=49  Identities=22%  Similarity=0.296  Sum_probs=31.8

Q ss_pred             ccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405          102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus       102 i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ++|.|...++..+-- .-.++.+..+|+..|++++|.+..+||..+.+.+
T Consensus         2 msf~Evk~lLk~~NI-~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L   50 (51)
T PF14788_consen    2 MSFKEVKKLLKMMNI-EMDDEYARQLFQECDKSQSGRLEGEEFEEFYKRL   50 (51)
T ss_dssp             BEHHHHHHHHHHTT-----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHcc-CcCHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence            567777776665443 3455667778888888888888888888776654

...

>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]

Probab=97.64  E-value=0.00012  Score=59.46  Aligned_cols=93  Identities=19%  Similarity=0.270  Sum_probs=54.4

Q ss_pred             HHHHhhcccCCCCCcccHHHHHHHHhcCCCCC----HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHH
Q 030405           52 ELFKKISSAVIDDGLINKEEFQLALFKTNKKE----SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFS  127 (178)
Q Consensus        52 ~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~----~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~  127 (178)
                      .+|+.+|+.  ++|.++.+++..++.+..+..    +...+.+-..|..+....++|.+|-.++..+.     .|...++
T Consensus       112 ~aFqlFDr~--~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~~-----~E~~~qa  184 (694)
T KOG0751|consen  112 VAFQLFDRL--GNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDIRKRHLNYAEFTQFLHEFQ-----LEHAEQA  184 (694)
T ss_pred             HHHHHhccc--CCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhHHHHhccHHHHHHHHHHHH-----HHHHHHH
Confidence            455555555  555566666655554411110    00011111122223334455666555555442     3557889


Q ss_pred             HHhhCCCCCCceeHHHHHHHHHHH
Q 030405          128 FQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus       128 F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      |+..|+.++|.|+.-++.+++.++
T Consensus       185 fr~~d~~~ng~is~Ldfq~imvt~  208 (694)
T KOG0751|consen  185 FREKDKAKNGFISVLDFQDIMVTI  208 (694)
T ss_pred             HHHhcccCCCeeeeechHhhhhhh
Confidence            999999999999999999999876

>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]

Probab=97.59  E-value=0.00018  Score=60.24  Aligned_cols=112  Identities=24%  Similarity=0.415  Sum_probs=84.0

Q ss_pred             CcHHHHHhhcCCCHHHHHHHHHHHHhh-cccCCCCC--cc---------cHHHHHHHHhc--CCCCCHHHHHHHHHHHhc
Q 030405           31 EDPEALARETVFSVSEIEALYELFKKI-SSAVIDDG--LI---------NKEEFQLALFK--TNKKESLFADRVFDLFDT   96 (178)
Q Consensus        31 ~~~~~~~~~~~~~~~~i~~l~~~F~~~-d~~~~~~g--~i---------~~~ef~~~l~~--~~~~~~~~~~~lf~~~d~   96 (178)
                      ..++.+.+...|+..++..++++|... -.++.+-|  ..         +...|..++..  .......++.++|+.+|.
T Consensus       487 t~lrs~~~~~~lt~~dL~~lYd~f~~e~~~~~~~~~~~~p~~~~~eqyi~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~  566 (671)
T KOG4347|consen  487 TILRSVVQTTSLTNTDLENLYDLFKEEHLTNSIGLGRSDPDFEAFEQYIDYAQFLEVFRELLPWAVSLIFLERLFRLLDD  566 (671)
T ss_pred             HHHHhhcccCccCHHHHHHHHHHHHHHHhccCcccCCCCCCchHHHHHHHHhhHHHHhhccCchhHHHHHHHHHHHhccc
Confidence            788889999999999999999999753 11211111  22         22233332222  122334568899999999


Q ss_pred             CCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHH
Q 030405           97 KHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEV  144 (178)
Q Consensus        97 ~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~  144 (178)
                      +.+|.++|.+++.++..+.. +..-+++..+|+++|.+++ ..+.+|.
T Consensus       567 s~~g~Ltf~~lv~gL~~l~~-~~~~ek~~l~y~lh~~p~~-~~d~e~~  612 (671)
T KOG4347|consen  567 SMTGLLTFKDLVSGLSILKA-GDALEKLKLLYKLHDPPAD-ELDREEV  612 (671)
T ss_pred             CCcceeEHHHHHHHHHHHHh-hhHHHHHHHHHhhccCCcc-ccccccc
Confidence            99999999999999999887 6777899999999999999 8888887

>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]

Probab=97.49  E-value=0.00052  Score=56.26  Aligned_cols=75  Identities=19%  Similarity=0.281  Sum_probs=63.1

Q ss_pred             hcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCC----HHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           39 ETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKE----SLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        39 ~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~----~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      +..||..|+..+.+.|...| +  ++|+++..++..++.+.....    ...++.+....+.+.+|.|+|++|+..+-.+
T Consensus        10 ~~~~tq~El~~l~~kF~~~d-~--~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l   86 (627)
T KOG0046|consen   10 QSQLTQEELRELKEKFNKLD-D--QKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNL   86 (627)
T ss_pred             cccccHHHHHHHHHHHHhhc-C--CCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhh
Confidence            34589999999999999999 6  899999999999887743333    6678899999999999999999999977655


Q ss_pred             CC
Q 030405          115 HP  116 (178)
Q Consensus       115 ~~  116 (178)
                      ..
T Consensus        87 ~s   88 (627)
T KOG0046|consen   87 KS   88 (627)
T ss_pred             hh
Confidence            43

>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]

Probab=97.48  E-value=0.0012  Score=53.02  Aligned_cols=96  Identities=21%  Similarity=0.336  Sum_probs=70.9

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHH---hcC---CC----------CCHHHHH--HHHHHHhcCCCCcccHHHHHHH
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLAL---FKT---NK----------KESLFAD--RVFDLFDTKHNGILDFEEFARA  110 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l---~~~---~~----------~~~~~~~--~lf~~~d~~~~g~i~~~ef~~~  110 (178)
                      ...-+|..+|.|  ++|.|+.+||....   ...   +.          .....+.  -+--.|..++++++++++|...
T Consensus       234 ~F~IAFKMFD~d--gnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F  311 (489)
T KOG2643|consen  234 NFRIAFKMFDLD--GNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKF  311 (489)
T ss_pred             cceeeeeeeecC--CCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHH
Confidence            355578889999  99999999998764   110   00          0011111  2334467889999999999999


Q ss_pred             HHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405          111 LSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus       111 ~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      +..++.     |-+.--|..+|+..+|.|+..+|-.+|-..
T Consensus       312 ~e~Lq~-----Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~  347 (489)
T KOG2643|consen  312 QENLQE-----EILELEFERFDKGDSGAISEVDFAELLLAY  347 (489)
T ss_pred             HHHHHH-----HHHHHHHHHhCcccccccCHHHHHHHHHHH
Confidence            987753     667778999999999999999999998654

>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]

Probab=97.45  E-value=0.00037  Score=53.95  Aligned_cols=86  Identities=19%  Similarity=0.260  Sum_probs=65.8

Q ss_pred             CCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHH
Q 030405           63 DDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQ  142 (178)
Q Consensus        63 ~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~  142 (178)
                      +.+.|--.+|..-+   ..+.......+|.+||.+++|.++|.+....+..+.......+-++-+|+.|+.+.||.+...
T Consensus       240 kg~~igi~efa~~l---~vpvsd~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~  316 (412)
T KOG4666|consen  240 KGPDIGIVEFAVNL---RVPVSDKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEH  316 (412)
T ss_pred             cCCCcceeEeeeee---ecchhhhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchH
Confidence            34455555665433   222234457889999999999999999988888877656667788999999999999999999


Q ss_pred             HHHHHHHHH
Q 030405          143 EVKQMVVAT  151 (178)
Q Consensus       143 e~~~~l~~~  151 (178)
                      +|..+|+..
T Consensus       317 ~ls~ilq~~  325 (412)
T KOG4666|consen  317 ILSLILQVV  325 (412)
T ss_pred             HHHHHHHHh
Confidence            999888875

>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A

Probab=97.44  E-value=0.00024  Score=34.05  Aligned_cols=23  Identities=43%  Similarity=0.788  Sum_probs=16.0

Q ss_pred             HHHHHHHhcCCCCcccHHHHHHH
Q 030405           88 DRVFDLFDTKHNGILDFEEFARA  110 (178)
Q Consensus        88 ~~lf~~~d~~~~g~i~~~ef~~~  110 (178)
                      +.+|+.+|.|++|.|+++||..+
T Consensus         2 ~~~F~~~D~d~DG~is~~E~~~~   24 (25)
T PF13202_consen    2 KDAFQQFDTDGDGKISFEEFQRL   24 (25)
T ss_dssp             HHHHHHHTTTSSSEEEHHHHHHH
T ss_pred             HHHHHHHcCCCCCcCCHHHHHHH
Confidence            45677777777777777777653

...

>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A

Probab=97.41  E-value=0.0014  Score=43.02  Aligned_cols=63  Identities=14%  Similarity=0.183  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .....+|+..+. ++|.|+-++...++..-   +.+.+.+..+|.+.|.|++|+++.+||.-+|.-+
T Consensus        10 ~~y~~~F~~l~~-~~g~isg~~a~~~f~~S---~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li   72 (104)
T PF12763_consen   10 QKYDQIFQSLDP-QDGKISGDQAREFFMKS---GLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLI   72 (104)
T ss_dssp             HHHHHHHHCTSS-STTEEEHHHHHHHHHHT---TSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCC-CCCeEeHHHHHHHHHHc---CCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence            345788888875 57999999998877654   5678899999999999999999999999888755

...

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=97.40  E-value=0.00057  Score=55.08  Aligned_cols=66  Identities=21%  Similarity=0.362  Sum_probs=54.8

Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC---CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFHPN---SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~---~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .++.+|+..|.+++|.|+.+||...|..+...   .-.+..+-.+=+..|.|+||.|+..||-.++.-.
T Consensus       548 ~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv  616 (631)
T KOG0377|consen  548 SLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV  616 (631)
T ss_pred             hHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence            36789999999999999999999988765532   2345678888899999999999999998877543

>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A

Probab=97.39  E-value=0.00094  Score=37.61  Aligned_cols=49  Identities=22%  Similarity=0.291  Sum_probs=38.5

Q ss_pred             cccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           66 LINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        66 ~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      +|+..|+..+|...+.. .+..+..+|+.+|.+++|.+..+||..++..+
T Consensus         1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L   50 (51)
T PF14788_consen    1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKRL   50 (51)
T ss_dssp             EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence            47788999988775544 45678999999999999999999999988765

...

>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional

Probab=97.34  E-value=0.00071  Score=54.61  Aligned_cols=53  Identities=34%  Similarity=0.523  Sum_probs=45.9

Q ss_pred             HHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           48 EALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        48 ~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ..+...|..+|.+  ++|.|+..||..            ++.+|..+|.|++|.|+++||..++...
T Consensus       334 ~~l~~aF~~~D~d--gdG~Is~~E~~~------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~  386 (391)
T PRK12309        334 HAAQEIFRLYDLD--GDGFITREEWLG------------SDAVFDALDLNHDGKITPEEMRAGLGAA  386 (391)
T ss_pred             HHHHHHHHHhCCC--CCCcCcHHHHHH------------HHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            4567789999999  999999999942            4789999999999999999999988653

>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B

Probab=97.32  E-value=0.00051  Score=34.62  Aligned_cols=25  Identities=36%  Similarity=0.756  Sum_probs=15.7

Q ss_pred             HHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           88 DRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        88 ~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      +.+|+.+|.+++|.|+++||..++.
T Consensus         3 ~~~F~~~D~d~dG~I~~~el~~~l~   27 (31)
T PF13405_consen    3 REAFKMFDKDGDGFIDFEELRAILR   27 (31)
T ss_dssp             HHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            4566666666666666666666654

...

>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins

Probab=97.26  E-value=0.0016  Score=43.38  Aligned_cols=64  Identities=19%  Similarity=0.198  Sum_probs=46.1

Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHH
Q 030405           80 NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ  146 (178)
Q Consensus        80 ~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~  146 (178)
                      .......+...|..+|.|++|.++..|+..+...+.   ..+.-++..|+..|.|+||.|+..|+..
T Consensus        49 ~~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l~---~~e~C~~~F~~~CD~n~d~~Is~~EW~~  112 (113)
T PF10591_consen   49 YSECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPLM---PPEHCARPFFRSCDVNKDGKISLDEWCN  112 (113)
T ss_dssp             GGGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTTS---TTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred             hhhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHHh---hhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence            334455678889999999999999999887765442   3456688999999999999999999864

SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.

>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]

Probab=97.25  E-value=0.0019  Score=46.86  Aligned_cols=65  Identities=15%  Similarity=0.238  Sum_probs=57.5

Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .+..+|+.+|.+.||.|++.|+..++..+.. ..+.--+..+.+..|.|.+|.|+.-||--+....
T Consensus       100 ~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLga-pQTHL~lK~mikeVded~dgklSfreflLIfrka  164 (244)
T KOG0041|consen  100 DAESMFKQYDEDRDGFIDLMELKRMMEKLGA-PQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKA  164 (244)
T ss_pred             HHHHHHHHhcccccccccHHHHHHHHHHhCC-chhhHHHHHHHHHhhcccccchhHHHHHHHHHHH
Confidence            4678999999999999999999999999876 4556668889999999999999999998888765

>smart00054 EFh EF-hand, calcium binding motif

Probab=97.23  E-value=0.00043  Score=33.22  Aligned_cols=27  Identities=30%  Similarity=0.537  Sum_probs=21.4

Q ss_pred             HHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          124 IEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       124 ~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ++.+|+.+|.+++|.|+..||..++..
T Consensus         2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~   28 (29)
T smart00054        2 LKEAFRLFDKDGDGKIDFEEFKDLLKA   28 (29)
T ss_pred             HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            467888888888888888888887753

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.

>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]

Probab=97.14  E-value=0.0031  Score=57.64  Aligned_cols=83  Identities=23%  Similarity=0.381  Sum_probs=65.5

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCC------CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCC
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPN------SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLS  160 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~------~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~  160 (178)
                      ...+|+.||.+.+|.+++++|..++..+...      +.++.++..+..+.|++.+|+|+..|+..+|-.  +.+.+-++
T Consensus      2255 Fs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~--~ETeNI~s 2332 (2399)
T KOG0040|consen 2255 FSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMIS--KETENILS 2332 (2399)
T ss_pred             HHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHh--cccccccc
Confidence            4678999999999999999999999876532      344558999999999999999999999999854  23334566


Q ss_pred             HHHHHHHHHHH
Q 030405          161 DDVIESIIDKV  171 (178)
Q Consensus       161 ~~~~~~~~~~~  171 (178)
                      .++|+..++.+
T Consensus      2333 ~~eIE~AfraL 2343 (2399)
T KOG0040|consen 2333 SEEIEDAFRAL 2343 (2399)
T ss_pred             hHHHHHHHHHh
Confidence            77777665544

>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]

Probab=96.97  E-value=0.0035  Score=48.75  Aligned_cols=99  Identities=13%  Similarity=0.104  Sum_probs=79.4

Q ss_pred             HHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHH
Q 030405           48 EALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIE  125 (178)
Q Consensus        48 ~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~  125 (178)
                      ..+...|..+|.+  ++|.++..+....+.-  ........++-.|+.|+...||.+.-.+|..++.....  ...-.+-
T Consensus       259 d~l~~~f~LFde~--~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lg--v~~l~v~  334 (412)
T KOG4666|consen  259 DKLAPTFMLFDEG--TTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVLG--VEVLRVP  334 (412)
T ss_pred             hhhhhhhheecCC--CCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhcC--cceeecc
Confidence            5677889999988  8999998887766543  33444556788999999999999999999988876653  3334466


Q ss_pred             HHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          126 FSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       126 ~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      -+|+..+...+|+|+.++|+.+...
T Consensus       335 ~lf~~i~q~d~~ki~~~~f~~fa~~  359 (412)
T KOG4666|consen  335 VLFPSIEQKDDPKIYASNFRKFAAT  359 (412)
T ss_pred             ccchhhhcccCcceeHHHHHHHHHh
Confidence            7899999999999999999999754

>KOG4251 consensus Calcium binding protein [General function prediction only]

Probab=96.80  E-value=0.0017  Score=48.52  Aligned_cols=121  Identities=15%  Similarity=0.144  Sum_probs=72.1

Q ss_pred             HHHHhhcccCCCCCcccHHHHHHHHhc-CCCCCHH--------------HHHHHHHHHhcCCCCc---------ccHHHH
Q 030405           52 ELFKKISSAVIDDGLINKEEFQLALFK-TNKKESL--------------FADRVFDLFDTKHNGI---------LDFEEF  107 (178)
Q Consensus        52 ~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~~~~~--------------~~~~lf~~~d~~~~g~---------i~~~ef  107 (178)
                      ..|...|++  ++|.|+..+|+--+.+ .+.....              .-.+.|..-+.+..+.         ++-+||
T Consensus       144 thFraVDpd--gDGhvsWdEykvkFlaskghsekevadairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEf  221 (362)
T KOG4251|consen  144 THFRAVDPD--GDGHVSWDEYKVKFLASKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEF  221 (362)
T ss_pred             hheeeeCCC--CCCceehhhhhhHHHhhcCcchHHHHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHH
Confidence            467777888  9999999998764433 1111111              0123344444444444         444888


Q ss_pred             HHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhh-cCCCCCHHHHHHHHHHHHhh
Q 030405          108 ARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE-SGMNLSDDVIESIIDKVLSL  174 (178)
Q Consensus       108 ~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~-~~~~l~~~~~~~~~~~~~~~  174 (178)
                      ..++..-...+-...-+..+.+.+|.||+..++..||.......... .|..+..-.++.-.+++=+.
T Consensus       222 lsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeEl  289 (362)
T KOG4251|consen  222 LSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEEL  289 (362)
T ss_pred             HHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHH
Confidence            88876554434445567778899999999999999998876433221 13344444444444444333

>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins

Probab=96.80  E-value=0.00076  Score=44.99  Aligned_cols=63  Identities=14%  Similarity=0.229  Sum_probs=43.7

Q ss_pred             HHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHH
Q 030405           44 VSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFAR  109 (178)
Q Consensus        44 ~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~  109 (178)
                      ......+.=.|..+|.+  ++|.++..|+..+.... .+.+.=+...|+.+|.|++|.|++.||..
T Consensus        50 ~~~~~~~~W~F~~LD~n--~d~~L~~~El~~l~~~l-~~~e~C~~~F~~~CD~n~d~~Is~~EW~~  112 (113)
T PF10591_consen   50 SECKRVVHWKFCQLDRN--KDGVLDRSELKPLRRPL-MPPEHCARPFFRSCDVNKDGKISLDEWCN  112 (113)
T ss_dssp             GGGHHHHHHHHHHH--T---SSEE-TTTTGGGGSTT-STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred             hhhhhhhhhhHhhhcCC--CCCccCHHHHHHHHHHH-hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence            34455677789999999  99999999998765433 23333357899999999999999999875

SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.

>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]

Probab=96.69  E-value=0.05  Score=46.92  Aligned_cols=118  Identities=18%  Similarity=0.255  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHH
Q 030405           45 SEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDK  123 (178)
Q Consensus        45 ~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~  123 (178)
                      ..-.-+...|+..|.+  .+|.++..+...++...... ....+..+|+..+..+++.+.+.+|.........   .. +
T Consensus       133 ~~~~wi~~~~~~ad~~--~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~---rp-e  206 (746)
T KOG0169|consen  133 RREHWIHSIFQEADKN--KNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTK---RP-E  206 (746)
T ss_pred             hHHHHHHHHHHHHccc--cccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhcc---Cc-h
Confidence            3345677899999999  99999999988887663333 3455788899998888999999999998877754   22 7


Q ss_pred             HHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          124 IEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       124 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      +..+|..+- ++.++++.+++..+|... +. ..+.+...++++++..
T Consensus       207 v~~~f~~~s-~~~~~ls~~~L~~Fl~~~-q~-e~~~~~~~ae~ii~~~  251 (746)
T KOG0169|consen  207 VYFLFVQYS-HGKEYLSTDDLLRFLEEE-QG-EDGATLDEAEEIIERY  251 (746)
T ss_pred             HHHHHHHHh-CCCCccCHHHHHHHHHHh-cc-cccccHHHHHHHHHHh
Confidence            888999884 449999999999999876 11 2357777777777553

>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]

Probab=96.38  E-value=0.025  Score=44.41  Aligned_cols=104  Identities=16%  Similarity=0.082  Sum_probs=74.5

Q ss_pred             cCCCHHHH----HHHHHHHHhhcccCCCCCcccHHHHHHH---Hhc-CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 030405           40 TVFSVSEI----EALYELFKKISSAVIDDGLINKEEFQLA---LFK-TNKKESLFADRVFDLFDTKHNGILDFEEFARAL  111 (178)
Q Consensus        40 ~~~~~~~i----~~l~~~F~~~d~~~~~~g~i~~~ef~~~---l~~-~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~  111 (178)
                      .+.+..++    .+|++.|..+-.+  +++......+...   +.. ..+.-...+..+|+.+|.|.++.++-.|+..+-
T Consensus       199 ~~Ct~qeL~~lg~RL~dWF~~lhe~--s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~  276 (434)
T KOG3555|consen  199 YACTDQELRRLGNRLRDWFKALHED--SSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTNYDLLLDQSELRAIE  276 (434)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhh--hhccCcchhhcccccccccccCcchhhhhhhhhhccccccccccCHHHhhhhh
Confidence            45788777    4567778766444  4444444444332   111 233345567899999999999999999987754


Q ss_pred             HhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          112 SIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       112 ~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .     ...+.-++..|...|...||.|+-.|+...+..
T Consensus       277 l-----dknE~CikpFfnsCD~~kDg~iS~~EWC~CF~k  310 (434)
T KOG3555|consen  277 L-----DKNEACIKPFFNSCDTYKDGSISTNEWCYCFQK  310 (434)
T ss_pred             c-----cCchhHHHHHHhhhcccccCccccchhhhhhcc
Confidence            2     345677999999999999999999999988754

>smart00054 EFh EF-hand, calcium binding motif

Probab=96.14  E-value=0.011  Score=27.98  Aligned_cols=25  Identities=44%  Similarity=0.802  Sum_probs=17.8

Q ss_pred             HHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           88 DRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        88 ~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      +.+|+.+|.+++|.|++.+|..++.
T Consensus         3 ~~~f~~~d~~~~g~i~~~e~~~~~~   27 (29)
T smart00054        3 KEAFRLFDKDGDGKIDFEEFKDLLK   27 (29)
T ss_pred             HHHHHHHCCCCCCcEeHHHHHHHHH
Confidence            5677777777777777777776654

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.

>KOG4065 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.14  E-value=0.032  Score=36.95  Aligned_cols=66  Identities=17%  Similarity=0.304  Sum_probs=34.1

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-----------CCCCCHHHHHHH----HHHHhcCCCCcccH
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-----------TNKKESLFADRV----FDLFDTKHNGILDF  104 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-----------~~~~~~~~~~~l----f~~~d~~~~g~i~~  104 (178)
                      .++++++++..+  |...|-+  +++.++--++.+++..           .+..++..+.++    .+.-|.|++|.|+|
T Consensus        61 a~mtpeqlqfHY--F~MHDld--knn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDY  136 (144)
T KOG4065|consen   61 AKMTPEQLQFHY--FSMHDLD--KNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDY  136 (144)
T ss_pred             hhCCHHHHhhhh--hhhhccC--cCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeH
Confidence            455666655443  4444444  6677777777776632           112223333333    33335556666666


Q ss_pred             HHHHH
Q 030405          105 EEFAR  109 (178)
Q Consensus       105 ~ef~~  109 (178)
                      .||+.
T Consensus       137 gEflK  141 (144)
T KOG4065|consen  137 GEFLK  141 (144)
T ss_pred             HHHHh
Confidence            66654

>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]

Probab=95.77  E-value=0.05  Score=44.39  Aligned_cols=84  Identities=17%  Similarity=0.227  Sum_probs=62.9

Q ss_pred             CCCcccHHHHHHHHhcC-CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH----hhCCC----CChhHHHHHHHHhhCC
Q 030405           63 DDGLINKEEFQLALFKT-NKKESLFADRVFDLFDTKHNGILDFEEFARALS----IFHPN----SPIDDKIEFSFQLYDL  133 (178)
Q Consensus        63 ~~g~i~~~ef~~~l~~~-~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~----~~~~~----~~~~e~~~~~F~~~D~  133 (178)
                      .+|+|+..+|..++... ....+.-++-+|+.+|.+++|.++..+...+..    ++...    ...+.-+-++|.+.-.
T Consensus       328 ~eGrmdykdFv~FilA~e~k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi~DMvkP  407 (493)
T KOG2562|consen  328 VEGRMDYKDFVDFILAEEDKDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALPFEDALCQIRDMVKP  407 (493)
T ss_pred             ecCcccHHHHHHHHHHhccCCCccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhCc
Confidence            67999999999987663 333445578999999999999999999765443    22211    1233456778888887


Q ss_pred             CCCCceeHHHHHH
Q 030405          134 KQQGFIERQEVKQ  146 (178)
Q Consensus       134 d~~G~I~~~e~~~  146 (178)
                      ...|+|+..||+.
T Consensus       408 ~~~~kItLqDlk~  420 (493)
T KOG2562|consen  408 EDENKITLQDLKG  420 (493)
T ss_pred             cCCCceeHHHHhh
Confidence            8899999999987

>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C

Probab=95.75  E-value=0.037  Score=34.50  Aligned_cols=62  Identities=15%  Similarity=0.284  Sum_probs=44.5

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCC-CChhHHHHHHHHhhCCC----CCCceeHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPN-SPIDDKIEFSFQLYDLK----QQGFIERQEVKQMVV  149 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~-~~~~e~~~~~F~~~D~d----~~G~I~~~e~~~~l~  149 (178)
                      +..+|..+.. +.+.|+.++|...+...++. ....+.+..+++.|..+    ..+.++.++|..+|.
T Consensus         2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~   68 (83)
T PF09279_consen    2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLF   68 (83)
T ss_dssp             HHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHH
T ss_pred             HHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHC
Confidence            4677888865 56778888888888776653 23466777777777543    468889999888883

It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....

>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]

Probab=95.43  E-value=0.011  Score=45.97  Aligned_cols=64  Identities=16%  Similarity=0.149  Sum_probs=51.3

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      +...|+.+|.|+++.|...|+.-+-..+.....+..-.+.+|+..|.|+|-.|+..|++..|..
T Consensus       335 v~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~  398 (421)
T KOG4578|consen  335 VHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV  398 (421)
T ss_pred             eeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence            4557999999999988888766554444443456677899999999999999999999999865

>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]

Probab=95.37  E-value=0.12  Score=45.58  Aligned_cols=103  Identities=16%  Similarity=0.154  Sum_probs=76.9

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCH---HHHHHHHHHH---hcCCCCcccHHHHHHHHHhh
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES---LFADRVFDLF---DTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~---~~~~~lf~~~---d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ..++..+..+...|..+++.  ..|.++.++|..++...+....   .....+|...   |.+..|.+++.+|...+.+-
T Consensus       740 ~~sQ~v~~ElrAle~~~~~~--d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~  817 (890)
T KOG0035|consen  740 GTSQYVLDELRALENEQDKI--DGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLERE  817 (890)
T ss_pred             chhHHHHHHHHHHHhHHHHh--hcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhh
Confidence            45566778888888888877  7788999999999877554432   2244555554   55556889999999999876


Q ss_pred             CCCCChhHHHHHHHHhhCCCCCCceeHHHHHH
Q 030405          115 HPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ  146 (178)
Q Consensus       115 ~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~  146 (178)
                      ....+....+..+|+.+-+++. +|..+|+..
T Consensus       818 ~e~l~~~~r~i~s~~d~~ktk~-~lL~eEL~~  848 (890)
T KOG0035|consen  818 YEDLDTELRAILAFEDWAKTKA-YLLLEELVR  848 (890)
T ss_pred             hhhhcHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence            6655667778889999866544 899999887

>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions

Probab=95.32  E-value=0.32  Score=33.09  Aligned_cols=101  Identities=11%  Similarity=0.266  Sum_probs=54.4

Q ss_pred             CcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHH-HH
Q 030405           31 EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEF-AR  109 (178)
Q Consensus        31 ~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef-~~  109 (178)
                      ..++.+++...+..-.+..+.+.|....-+...+..++..++..++           ..+|........+..+.... +.
T Consensus        24 ~KLR~lQk~~~l~lv~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L-----------~~iy~~l~~~~p~~~~i~~~~v~   92 (127)
T PF09068_consen   24 MKLRFLQKRLCLDLVDLSNVIEAFREHGLNQSNDSSLSVSQLETLL-----------SSIYEFLNKRLPTLHQIPSRPVD   92 (127)
T ss_dssp             HHHHHHHHHTTGGG--HHHHHHHHHHTT---T-TSEEEHHHHHHHH-----------HHHHHHHHHHSTTS--HH-----
T ss_pred             HHHHHHHHHHhheeeeHHHHHHHHHHcCCCcccCCCCCHHHHHHHH-----------HHHHHHHHHHCCCCCCCCchhHH
Confidence            4566677777777777777888887765441123457777777766           34553333322222221100 00


Q ss_pred             HHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          110 ALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       110 ~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .        ..+-.+.+++..||.+++|.|+.-.++-.|..
T Consensus        93 ~--------a~~L~ln~Ll~vyD~~rtG~I~vls~KvaL~~  125 (127)
T PF09068_consen   93 L--------AVDLLLNWLLNVYDSQRTGKIRVLSFKVALIT  125 (127)
T ss_dssp             H--------HHHHHHHHHHHHH-TT--SEEEHHHHHHHHHH
T ss_pred             H--------HHHHHHHHHHHHhCCCCCCeeehhHHHHHHHH
Confidence            0        11123678999999999999999998887754

The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.

>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism

Probab=94.54  E-value=0.13  Score=33.19  Aligned_cols=65  Identities=17%  Similarity=0.317  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcC---CCCcccHHHHHHHHHhhCC
Q 030405           46 EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTK---HNGILDFEEFARALSIFHP  116 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~---~~g~i~~~ef~~~~~~~~~  116 (178)
                      ....+...|+.+.    .+|+++.+.|..|+...  .+++++.+||+.+...   ..+.|+.+|+..+|..+..
T Consensus        28 ~W~~VE~RFd~La----~dG~L~rs~Fg~CIGM~--dSkeFA~eLFdALaRrr~i~~~~I~k~eL~efW~qisD   95 (100)
T PF08414_consen   28 GWKEVEKRFDKLA----KDGLLPRSDFGECIGMK--DSKEFAGELFDALARRRGIKGDSITKDELKEFWEQISD   95 (100)
T ss_dssp             -HHHHHHHHHHH-----BTTBEEGGGHHHHHT----S-HHHHHHHHHHHHHHTT--SSEE-HHHHHHHHHHHH-
T ss_pred             CHHHHHHHHHHhC----cCCcccHHHHHHhcCCc--ccHHHHHHHHHHHHHhcCCccCCcCHHHHHHHHHHhhc
Confidence            4677888999987    46999999999998432  3578899999998652   2367999999999877654

It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.

>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]

Probab=94.49  E-value=0.13  Score=42.48  Aligned_cols=72  Identities=17%  Similarity=0.265  Sum_probs=54.0

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFH  115 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~  115 (178)
                      .++.++.++..+.|.-+-++  .+|.|+-..-++++.+..+.- .++..||.+.|.+.||.+++.||...+..+.
T Consensus       224 ~IT~EQReYYvnQFrtvQpD--p~gfisGsaAknFFtKSklpi-~ELshIWeLsD~d~DGALtL~EFcAAfHLVV  295 (737)
T KOG1955|consen  224 QITPEQREYYVNQFRTVQPD--PHGFISGSAAKNFFTKSKLPI-EELSHIWELSDVDRDGALTLSEFCAAFHLVV  295 (737)
T ss_pred             ccCHHHHHHHHhhhhcccCC--cccccccHHHHhhhhhccCch-HHHHHHHhhcccCccccccHHHHHhhHhhee
Confidence            46778888888888888777  788888887777776644333 3357788888888888888888888776543

>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin

Probab=94.20  E-value=1  Score=32.16  Aligned_cols=62  Identities=13%  Similarity=0.186  Sum_probs=45.2

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCh------hHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI------DDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~------~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .+.+|..++..+.+.+++.|+..++..-....++      .-++..+|.+. .+.+|.+.+++++.+..
T Consensus        98 Fe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~iR~vYD  165 (174)
T PF05042_consen   98 FEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDIRGVYD  165 (174)
T ss_pred             HHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHHhhhcc
Confidence            6889999998888889999998888753322221      13455566665 67799999999998754

Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.

>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C

Probab=93.10  E-value=0.47  Score=29.42  Aligned_cols=62  Identities=29%  Similarity=0.405  Sum_probs=45.1

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHHHhc-CCC--CCHHHHHHHHHHHhcC----CCCcccHHHHHHHHHhh
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLALFK-TNK--KESLFADRVFDLFDTK----HNGILDFEEFARALSIF  114 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~--~~~~~~~~lf~~~d~~----~~g~i~~~ef~~~~~~~  114 (178)
                      +...|..+..   +.+.|+.++|..+|.. .+.  .....+..++..+..+    ..+.++++.|...+..-
T Consensus         2 i~~if~~ys~---~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~   70 (83)
T PF09279_consen    2 IEEIFRKYSS---DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSD   70 (83)
T ss_dssp             HHHHHHHHCT---TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHST
T ss_pred             HHHHHHHHhC---CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCC
Confidence            5566776643   3678999999999955 222  2456688888888654    46889999999988543

It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....

>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]

Probab=92.86  E-value=0.12  Score=42.64  Aligned_cols=71  Identities=11%  Similarity=0.173  Sum_probs=54.2

Q ss_pred             HHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH-HhhcCCCCCH
Q 030405           88 DRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT-LTESGMNLSD  161 (178)
Q Consensus        88 ~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~-~~~~~~~l~~  161 (178)
                      -.-|+.+..|-.|.|+=.--..++.   +.+.+.+++..+|++.|.|+||-++..||+..+.-+ .+..|++|.+
T Consensus       234 vnQFrtvQpDp~gfisGsaAknFFt---KSklpi~ELshIWeLsD~d~DGALtL~EFcAAfHLVVaRkNgypLPe  305 (737)
T KOG1955|consen  234 VNQFRTVQPDPHGFISGSAAKNFFT---KSKLPIEELSHIWELSDVDRDGALTLSEFCAAFHLVVARKNGYPLPE  305 (737)
T ss_pred             HhhhhcccCCcccccccHHHHhhhh---hccCchHHHHHHHhhcccCccccccHHHHHhhHhheeecccCCCCCC
Confidence            4457778888888877665555553   335677899999999999999999999999998754 5566665554

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=92.80  E-value=0.2  Score=43.56  Aligned_cols=63  Identities=19%  Similarity=0.307  Sum_probs=45.4

Q ss_pred             HHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           47 IEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        47 i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      .......|+.+|+.  .+|+++-..-+.+|...+++... +..|+.+-|.|+||.++-+||+..+.
T Consensus       194 klKY~QlFNa~Dkt--rsG~Lsg~qaR~aL~qS~Lpq~~-LA~IW~LsDvd~DGkL~~dEfilam~  256 (1118)
T KOG1029|consen  194 KLKYRQLFNALDKT--RSGYLSGQQARSALGQSGLPQNQ-LAHIWTLSDVDGDGKLSADEFILAMH  256 (1118)
T ss_pred             hhHHHHHhhhcccc--cccccccHHHHHHHHhcCCchhh-HhhheeeeccCCCCcccHHHHHHHHH
Confidence            34566778888877  78888888887777665555433 46677777888888888888876654

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=92.18  E-value=0.69  Score=40.46  Aligned_cols=67  Identities=16%  Similarity=0.307  Sum_probs=55.9

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      ++..+.......|..+-+   +.|+|+-.+-++++...+++. ..+..|+.+.|.|+||.++..||...|.
T Consensus        10 vT~~Er~K~~~qF~~Lkp---~~gfitg~qArnfflqS~LP~-~VLaqIWALsDldkDGrmdi~EfSIAmk   76 (1118)
T KOG1029|consen   10 VTDEERQKHDAQFGQLKP---GQGFITGDQARNFFLQSGLPT-PVLAQIWALSDLDKDGRMDIREFSIAMK   76 (1118)
T ss_pred             cchHHHHHHHHHHhccCC---CCCccchHhhhhhHHhcCCCh-HHHHHHHHhhhcCccccchHHHHHHHHH
Confidence            677787788888888765   689999999999987766654 4468899999999999999999987765

>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []

Probab=91.56  E-value=1.4  Score=30.92  Aligned_cols=63  Identities=17%  Similarity=0.265  Sum_probs=40.7

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHHHhcCCC----CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLALFKTNK----KESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~----~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      +...|..+-..  +...|+...|..++...+.    .....++-+|..+-..+...|+|++|..++..+
T Consensus         4 ~F~~f~~fG~~--~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~l   70 (154)
T PF05517_consen    4 VFKAFASFGKK--NGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAEL   70 (154)
T ss_dssp             HHHHHHCSSTS--TSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHH
T ss_pred             HHHHHHHhcCC--ccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHH
Confidence            34444444333  4557999999998855221    223457889999876666779999999888654

It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.

>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]

Probab=91.42  E-value=1  Score=37.65  Aligned_cols=64  Identities=14%  Similarity=0.187  Sum_probs=52.0

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCC--CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPN--SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~--~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      +..-|...| +++|.|+..+....+......  ...+++++.+....+.|.+|.|+.+||..++-.+
T Consensus        21 l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l   86 (627)
T KOG0046|consen   21 LKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNL   86 (627)
T ss_pred             HHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhh
Confidence            456788888 889999999999988765431  1236789999999999999999999999976544

>PLN02952 phosphoinositide phospholipase C

Probab=91.33  E-value=2.1  Score=36.80  Aligned_cols=69  Identities=14%  Similarity=0.295  Sum_probs=33.4

Q ss_pred             CcccHHHHHHHHHhhCC-CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          100 GILDFEEFARALSIFHP-NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       100 g~i~~~ef~~~~~~~~~-~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      |.++|++|..+...+.. ...+..++..+|..|-. +.+.++.++|..+|...-+.  ...+.+++..+++.+
T Consensus        15 g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~~Q~e--~~~~~~~~~~i~~~~   84 (599)
T PLN02952         15 GSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVLHQDE--LDCTLAEAQRIVEEV   84 (599)
T ss_pred             CCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHHhCCC--cCCCHHHHHHHHHHH
Confidence            55666666555444431 11234556666666632 33456666666666543111  124444444444433

>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes

Probab=90.82  E-value=0.42  Score=28.83  Aligned_cols=29  Identities=7%  Similarity=0.329  Sum_probs=25.6

Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      .+.+.+..+|+.+ .++.++||.+||++.|
T Consensus         3 ~s~eqv~~aFr~l-A~~KpyVT~~dLr~~l   31 (69)
T PF08726_consen    3 DSAEQVEEAFRAL-AGGKPYVTEEDLRRSL   31 (69)
T ss_dssp             STCHHHHHHHHHH-CTSSSCEEHHHHHHHS
T ss_pred             CCHHHHHHHHHHH-HcCCCcccHHHHHHHc
Confidence            4567899999999 7889999999999886

EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.

>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]

Probab=90.72  E-value=0.66  Score=40.32  Aligned_cols=70  Identities=20%  Similarity=0.478  Sum_probs=56.3

Q ss_pred             CCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhcc
Q 030405           99 NGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQ  176 (178)
Q Consensus        99 ~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~D  176 (178)
                      ++ ++++||.     ... ++.+.+++..|..+|. ++|.++.+++..++..+..............++...++++.|
T Consensus         2 ~~-~~~~~~~-----~~~-~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (646)
T KOG0039|consen    2 EG-ISFQELK-----ITD-CSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAALIMEELD   71 (646)
T ss_pred             CC-cchhhhc-----ccC-CChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhcc
Confidence            46 8999988     333 6788999999999998 899999999999999876665545556677777777777765

>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]

Probab=90.61  E-value=0.18  Score=39.61  Aligned_cols=61  Identities=16%  Similarity=0.349  Sum_probs=45.1

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHH---HhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLA---LFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~---l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      ++=.|..+|.|  +++.|.+.|++.+   +.+. .....=.+.+|+..|.|+|..|++.|+...+..
T Consensus       335 v~w~F~qLdkN--~nn~i~rrEwKpFK~~l~k~-s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~  398 (421)
T KOG4578|consen  335 VHWYFNQLDKN--SNNDIERREWKPFKRVLLKK-SKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV  398 (421)
T ss_pred             eeeeeeeeccc--ccCccchhhcchHHHHHHhh-ccHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence            34467888988  8888998887654   3221 122223578999999999999999999988754

>KOG4065 consensus Uncharacterized conserved protein [Function unknown]

Probab=90.55  E-value=1.6  Score=29.09  Aligned_cols=52  Identities=27%  Similarity=0.356  Sum_probs=41.7

Q ss_pred             HHHHHhhCCCCCCceeHHHHHHHHHHHHh--hcC----CCCCHHHHHHHHHHHHhhcc
Q 030405          125 EFSFQLYDLKQQGFIERQEVKQMVVATLT--ESG----MNLSDDVIESIIDKVLSLIQ  176 (178)
Q Consensus       125 ~~~F~~~D~d~~G~I~~~e~~~~l~~~~~--~~~----~~l~~~~~~~~~~~~~~~~D  176 (178)
                      -..|.+.|.|++|.|+--|+...+.....  ..|    +-.|+.|++.+++.++.+-|
T Consensus        70 fHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdD  127 (144)
T KOG4065|consen   70 FHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDD  127 (144)
T ss_pred             hhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccc
Confidence            34799999999999999999999887644  333    23567899999999988766

>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions

Probab=89.95  E-value=1.2  Score=28.34  Aligned_cols=53  Identities=17%  Similarity=0.320  Sum_probs=33.8

Q ss_pred             hHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh---hcCCCCCHHHHHHHHHHHHhh
Q 030405          121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT---ESGMNLSDDVIESIIDKVLSL  174 (178)
Q Consensus       121 ~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~---~~~~~l~~~~~~~~~~~~~~~  174 (178)
                      .++.+.+|+.+ .|.+|.++..-|..+|..+++   ..|+..+=.-++..++.+|..
T Consensus         2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~   57 (90)
T PF09069_consen    2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQ   57 (90)
T ss_dssp             HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHH
T ss_pred             hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcc
Confidence            36788999999 688999999999999887644   334322222266777777765

The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.

>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]

Probab=89.38  E-value=1.2  Score=37.78  Aligned_cols=141  Identities=16%  Similarity=0.239  Sum_probs=72.0

Q ss_pred             ccccccchhhhhhhcccCccccCCCCCCCcHHHHHhh---cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHH--Hh
Q 030405            3 QCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARE---TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLA--LF   77 (178)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~--l~   77 (178)
                      +++..|.++|.--..+.++-++-     ..+..+++.   ..+...+++.++...+...+++..+..++..-|..+  +.
T Consensus       192 ~~v~al~RIFki~D~d~D~~Lsd-----~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lf  266 (625)
T KOG1707|consen  192 RCVKALKRIFKISDSDNDGALSD-----AELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLF  266 (625)
T ss_pred             HHHHHHHHHHhhhccccccccch-----hhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHH
Confidence            34555666666666666666554     444444433   345566667777776666554333344554444332  11


Q ss_pred             c-CCCCCHHHHHHHHHHHhcCCCCcccHHHHHH-HHHh-----hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           78 K-TNKKESLFADRVFDLFDTKHNGILDFEEFAR-ALSI-----FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        78 ~-~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~-~~~~-----~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      . .+...+  ...+.+.|.-+.+-.++=+ ++. .+..     ..-...--+.+..+|..||.|+||.++.+|+..+...
T Consensus       267 iergr~Et--tW~iLR~fgY~DsleL~~~-~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~  343 (625)
T KOG1707|consen  267 IERGRHET--TWTILRKFGYTDSLELTDE-YLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFST  343 (625)
T ss_pred             HHhccccc--hhhhhhhcCCcchhhhhhh-hcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhh
Confidence            1 111111  1234444444333222211 111 0000     0000011245778999999999999999999999876


Q ss_pred             H
Q 030405          151 T  151 (178)
Q Consensus       151 ~  151 (178)
                      .
T Consensus       344 ~  344 (625)
T KOG1707|consen  344 A  344 (625)
T ss_pred             C
Confidence            5

>KOG2557 consensus Uncharacterized conserved protein, contains TLDc domain [Function unknown]

Probab=88.94  E-value=1.6  Score=34.95  Aligned_cols=110  Identities=16%  Similarity=0.288  Sum_probs=71.7

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--CCCHHHHHHHHHHHhcC-CCCcccHHHHHHHHHhhCCCC
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--KKESLFADRVFDLFDTK-HNGILDFEEFARALSIFHPNS  118 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~~~~~~~~~lf~~~d~~-~~g~i~~~ef~~~~~~~~~~~  118 (178)
                      .+.+..+.|......+...  ...+.+...+...-....  ...+...+.+|...... ++..++++.+......... +
T Consensus        14 ~naE~~~~l~~~kk~~~~g--a~~k~t~dq~v~~~~~~~~~~l~e~~~q~~f~~vk~~~q~~~~~l~k~~~~~~~~~~-g   90 (427)
T KOG2557|consen   14 INAETQKKLDDLKKLFVSG--ASNKQTNDQYVSYPVFQEYFGLSESLGQRMFDMVKQRRQDDKMTLEKLVIAKATYEK-G   90 (427)
T ss_pred             cCHHHHHHHHHHhhccccc--cchhhhhhhhhhcccccchhhhhhhccceEeeeccCccCCccchHHHHhhHHhhhcc-C
Confidence            4555555666665555322  334566666655422211  11122234556665443 3346999998887776665 6


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhh
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE  154 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~  154 (178)
                      ..++.+..++...|.+++|......+.+++..++..
T Consensus        91 t~dq~a~mL~~~~~~sgn~~~~~~q~eQ~~~~vlks  126 (427)
T KOG2557|consen   91 TDDQIAEMLYQTLDVNGNGVLSRSQLEQFLVVVLKS  126 (427)
T ss_pred             cccHHHHHHHHHHhhccccccchhHHHHHHHHHhhh
Confidence            778889999999999999999999999999877553

>PF11829 DUF3349: Protein of unknown function (DUF3349); InterPro: IPR021784 This family of proteins are functionally uncharacterised

Probab=88.86  E-value=3.4  Score=26.65  Aligned_cols=68  Identities=9%  Similarity=0.146  Sum_probs=52.0

Q ss_pred             ccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHh
Q 030405          102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLS  173 (178)
Q Consensus       102 i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~  173 (178)
                      |.-.+|.-++..+.. ..+++++..+-..+-.++....+..|+...+..+   ++...++++++.+..++-+
T Consensus        20 vP~~Dy~PLlALL~r-~Ltd~ev~~Va~~L~~~~~~~~~~~dI~~~I~~v---t~~~P~~~di~RV~~~Laa   87 (96)
T PF11829_consen   20 VPPTDYVPLLALLRR-RLTDDEVAEVAAELAARGDPPVDRIDIGVAITRV---TDELPTPEDIERVRARLAA   87 (96)
T ss_dssp             B-HHHHHHHHHHHTT-TS-HHHHHHHHHHHHHHTSS-BSCCHHHHHHHHH---CSS-S-HHHHHHHHHHHHT
T ss_pred             CCCCccHHHHHHhcc-cCCHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHH---HcCCcCHHHHHHHHHHHHh
Confidence            888889988888887 5888888888888877777777999999999887   4667889999988877643

This protein is found in bacteria. Proteins in this family are typically between 99 to 124 amino acids in length. ; PDB: 2KVC_A 3OL3_B 3OL4_A 2LKY_A.

>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]

Probab=88.71  E-value=0.7  Score=36.62  Aligned_cols=62  Identities=19%  Similarity=0.306  Sum_probs=50.1

Q ss_pred             HHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           48 EALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        48 ~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ..+.=+|..+|.+  .++.++.+|+..+..   -+.+.=++-+|+..|...+|.|+-.||...+..-
T Consensus       250 ds~gWMFnklD~N--~Dl~Ld~sEl~~I~l---dknE~CikpFfnsCD~~kDg~iS~~EWC~CF~k~  311 (434)
T KOG3555|consen  250 DSLGWMFNKLDTN--YDLLLDQSELRAIEL---DKNEACIKPFFNSCDTYKDGSISTNEWCYCFQKS  311 (434)
T ss_pred             hhhhhhhhccccc--cccccCHHHhhhhhc---cCchhHHHHHHhhhcccccCccccchhhhhhccC
Confidence            3466689999999  999999999988752   2334446889999999999999999998887643

>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]

Probab=88.70  E-value=1.7  Score=34.07  Aligned_cols=89  Identities=20%  Similarity=0.289  Sum_probs=56.8

Q ss_pred             HHHhhcccCCCCCcccHHHHHHHHhc----CC-CCC-HHH-----------HHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 030405           53 LFKKISSAVIDDGLINKEEFQLALFK----TN-KKE-SLF-----------ADRVFDLFDTKHNGILDFEEFARALSIFH  115 (178)
Q Consensus        53 ~F~~~d~~~~~~g~i~~~ef~~~l~~----~~-~~~-~~~-----------~~~lf~~~d~~~~g~i~~~ef~~~~~~~~  115 (178)
                      .|...|.+  ++|.++..++..++..    .. .++ +..           -+.+++.+|.|.+..|+.++|+.....-.
T Consensus       249 FF~LHD~N--sDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~ke  326 (442)
T KOG3866|consen  249 FFALHDLN--SDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDNKE  326 (442)
T ss_pred             heeeeccC--CcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhhcc
Confidence            56666777  8999999988876533    11 111 111           13467888999999999999998765433


Q ss_pred             CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          116 PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       116 ~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      - +.+.+.|..      .+..-..|-+|++++=.-
T Consensus       327 f-~~p~e~WEt------l~q~~~yTeEEL~~fE~e  354 (442)
T KOG3866|consen  327 F-NPPKEEWET------LGQKKVYTEEELQQFERE  354 (442)
T ss_pred             c-CCcchhhhh------hcccccccHHHHHHHHHH
Confidence            2 344444442      344556677777776443

>PLN02952 phosphoinositide phospholipase C

Probab=88.26  E-value=7.6  Score=33.54  Aligned_cols=86  Identities=15%  Similarity=0.104  Sum_probs=59.1

Q ss_pred             CCCcccHHHHHHHHhc---CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC-ChhHHHHHHHHhh-------
Q 030405           63 DDGLINKEEFQLALFK---TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS-PIDDKIEFSFQLY-------  131 (178)
Q Consensus        63 ~~g~i~~~ef~~~l~~---~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~-~~~e~~~~~F~~~-------  131 (178)
                      .+|.+++.+|..+...   ........+..+|..+..++ +.++.++|..++...+... ...+.+..+|..+       
T Consensus        13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~-~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~   91 (599)
T PLN02952         13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGG-GHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHV   91 (599)
T ss_pred             cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccc
Confidence            4689999999776543   22334567899999997654 5799999999999887632 2344555565543       


Q ss_pred             CCCCCCceeHHHHHHHHH
Q 030405          132 DLKQQGFIERQEVKQMVV  149 (178)
Q Consensus       132 D~d~~G~I~~~e~~~~l~  149 (178)
                      ...+.+.++.+.|..+|.
T Consensus        92 ~~~~~~~l~~~~F~~~l~  109 (599)
T PLN02952         92 TRYTRHGLNLDDFFHFLL  109 (599)
T ss_pred             ccccccCcCHHHHHHHHc
Confidence            112334689999998884

>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A

Probab=86.66  E-value=1.4  Score=30.38  Aligned_cols=33  Identities=15%  Similarity=0.259  Sum_probs=19.2

Q ss_pred             CCcccHHHHHHHHHhhCCCCChhHHHHHHHHhh
Q 030405           99 NGILDFEEFARALSIFHPNSPIDDKIEFSFQLY  131 (178)
Q Consensus        99 ~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~  131 (178)
                      .+.|+|+.|...+........+++.-+.+|..|
T Consensus        46 ~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF   78 (138)
T PF14513_consen   46 EEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSF   78 (138)
T ss_dssp             TTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS
T ss_pred             CCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence            346777777777776665455555666677766

>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=86.20  E-value=3.4  Score=35.14  Aligned_cols=74  Identities=12%  Similarity=0.116  Sum_probs=44.4

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHP  116 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~  116 (178)
                      .++++++...+.+|..+|.+  ..|++...+....+...+ .-+....+++.+..+.+-.|.+...+|...+..+..
T Consensus       586 ~~~~~~~~~~~~rf~~lD~~--k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~~  660 (680)
T KOG0042|consen  586 KLTPEDFLRRKTRFAFLDAD--KKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIKN  660 (680)
T ss_pred             ccCHHHHHHHHHHHHhhcch--HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHhc
Confidence            35666666666777666665  566666666666665533 223344555666666655666666666666665544

>KOG4286 consensus Dystrophin-like protein [Cell motility; Signal transduction mechanisms; Cytoskeleton]

Probab=85.28  E-value=4.4  Score=35.57  Aligned_cols=63  Identities=11%  Similarity=0.242  Sum_probs=49.4

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ...+++.||...+|.|..-+|...+..+.+ ...+++++.+|...-..+.-.+ ...|..+|..+
T Consensus       472 lN~llNvyD~~R~g~irvls~ki~~i~lck-~~leek~~ylF~~vA~~~sq~~-q~~l~lLL~dl  534 (966)
T KOG4286|consen  472 LNWLLNVYDTGRTGRIRVLSFKIGIISLCK-AHLEDKYRYLFKQVASSTSQCD-QRRLGLLLHDL  534 (966)
T ss_pred             HHHHHHhcccCCCcceEEeeehhhHHHHhc-chhHHHHHHHHHHHcCchhhHH-HHHHHHHHHHH
Confidence            467899999999999999999999888887 6778999999999965555443 55565555543

>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]

Probab=84.45  E-value=7  Score=34.32  Aligned_cols=68  Identities=21%  Similarity=0.279  Sum_probs=56.4

Q ss_pred             CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           83 ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        83 ~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .+.++..+|...|.+++|.+++.+-..++..+.. .-....++.+|+..|..++|.+..+++..+-..+
T Consensus       134 ~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~-~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~  201 (746)
T KOG0169|consen  134 REHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNV-QLSESKARRLFKESDNSQTGKLEEEEFVKFRKEL  201 (746)
T ss_pred             HHHHHHHHHHHHccccccccchhhHHHHHHHHHH-hhhHHHHHHHHHHHHhhccceehHHHHHHHHHhh
Confidence            3456788999999999999999998887776554 4556789999999999999999999998876654

>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []

Probab=83.95  E-value=12  Score=26.19  Aligned_cols=83  Identities=17%  Similarity=0.226  Sum_probs=54.0

Q ss_pred             HHHHHHH---hcCCCCcccHHHHHHHHHh--hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHH
Q 030405           88 DRVFDLF---DTKHNGILDFEEFARALSI--FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDD  162 (178)
Q Consensus        88 ~~lf~~~---d~~~~g~i~~~ef~~~~~~--~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~  162 (178)
                      +.+|..|   ...+...++-..|..+|..  +....-....+..+|..+-..+...|++++|..+|..+....+..-+  
T Consensus         2 ~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~~~~~~~~--   79 (154)
T PF05517_consen    2 EAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELAEKKGKDKS--   79 (154)
T ss_dssp             HHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHHHHSCCCT--
T ss_pred             HHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHhhcccc--
Confidence            4566666   2334567999999988874  22324566778899999866666779999999999988655443333  


Q ss_pred             HHHHHHHHHH
Q 030405          163 VIESIIDKVL  172 (178)
Q Consensus       163 ~~~~~~~~~~  172 (178)
                      ++++++..+.
T Consensus        80 ~~~~~~~kl~   89 (154)
T PF05517_consen   80 SAEELKEKLT   89 (154)
T ss_dssp             HHHHHHHHHH
T ss_pred             cHHHHHHHHH
Confidence            5555665553

It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.

>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin

Probab=80.59  E-value=11  Score=27.12  Aligned_cols=100  Identities=14%  Similarity=0.062  Sum_probs=55.7

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHH--HHHHHHHHHhc--CCCCcccHHHHHHHHHhhC---------
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL--FADRVFDLFDT--KHNGILDFEEFARALSIFH---------  115 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~--~~~~lf~~~d~--~~~g~i~~~ef~~~~~~~~---------  115 (178)
                      .|.....-+|++  ++|.|.+.|-...+...+...-.  .+.-+....-.  ...+-+.-.-|...+..+.         
T Consensus         8 ~LQqHvaFFDrd--~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg   85 (174)
T PF05042_consen    8 VLQQHVAFFDRD--KDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSG   85 (174)
T ss_pred             HHhhhhceeCCC--CCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCcc
Confidence            466666778888  99999998877766554433211  11111111100  0111111111111111111         


Q ss_pred             ----CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          116 ----PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       116 ----~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                          ...-..++...+|..++..+.+.+|..|+..+++.
T Consensus        86 ~YD~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~  124 (174)
T PF05042_consen   86 AYDTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKG  124 (174)
T ss_pred             ccccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHh
Confidence                00123467899999999989999999999999876

Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	178
2zfd_A	226	The Crystal Structure Of Plant Specific Calcium Bin		3e-82
1uhn_A	189	The Crystal Structure Of The Calcium Binding Protei		4e-70
2ehb_A	207	The Structure Of The C-Terminal Domain Of The Prote		9e-51
1v1f_A	222	Structure Of The Arabidopsis Thaliana Sos3 Complexe		1e-50
1s1e_A	224	Crystal Structure Of Kv Channel-Interacting Protein		2e-12
1s6c_A	183	Crystal Structure Of The Complex Between Kchip1 And		2e-12
2l2e_A	190	Solution Nmr Structure Of Myristoylated Ncs1p In Ap		1e-11
3dd4_A	229	Structural Basis Of Kchip4a Modulation Of Kv4.3 Slo		4e-11
2nz0_A	180	Crystal Structure Of Potassium Channel Kv4.3 In Com		5e-11
2i2r_E	180	Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX Len		5e-11
1tco_B	169	Ternary Complex Of A Calcineurin A Fragment, Calcin		9e-11
1mf8_B	170	Crystal Structure Of Human Calcineurin Complexed Wi		9e-11
1g8i_A	190	Crystal Structure Of Human Frequenin (Neuronal Calc		2e-10
3ll8_B	155	Crystal Structure Of Calcineurin In Complex With Ak		4e-10
2p6b_B	156	Crystal Structure Of Human Calcineurin In Complex W		4e-10
2jul_A	256	Nmr Structure Of Dream Length = 256		2e-09
2ct9_A	208	The Crystal Structure Of Calcineurin B Homologous P		4e-09
2e30_A	195	Solution Structure Of The Cytoplasmic Region Of Na+		8e-09
2het_A	189	Non-Myristoylated Bovine Recoverin (Truncated At C-		5e-08
2i94_A	202	Nmr Structure Of Recoverin Bound To Rhodopsin Kinas		5e-08
1omr_A	201	Non-Myristoylated Wild-Type Bovine Recoverin With C		5e-08
1jsa_A	201	Myristoylated Recoverin With Two Calciums Bound, Nm		5e-08
1bjf_A	193	Crystal Structure Of Recombinant Bovine Neurocalcin		6e-08
1omv_A	201	Non-Myristoylated Bovine Recoverin (E85q Mutant) Wi		1e-07
1la3_A	201	Solution Structure Of Recoverin Mutant, E85q Length		1e-07
2d8n_A	207	Crystal Structure Of Human Recoverin At 2.2 A Resol		3e-07
1fpw_A	190	Structure Of Yeast Frequenin Length = 190		2e-06
2ggz_A	211	Crystal Structure Of Human Guanylate Cyclase Activa		5e-06
2bec_A	202	Crystal Structure Of Chp2 In Complex With Its Bindi		6e-06
2r2i_A	198	Myristoylated Guanylate Cyclase Activating Protein-		6e-05
1jba_A	204	Unmyristoylated Gcap-2 With Three Calcium Ions Boun		4e-04

>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding Protein Atcbl2 In Complex With The Regulatory Domain Of Atcipk14 Length = 226

Iteration: 1
 Score =  300 bits (767), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 147/172 (85%), Positives = 153/172 (88%)
Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           M QC+DG+KH C  V+ C D DLYKQ  GL DPE LAR+TVFSVSEIEALYELFKKISSA
Sbjct: 1   MSQCVDGIKHLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSA 60
Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL FEEFARALS+FHPN+PI
Sbjct: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPI 120
Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           DDKI FSFQLYDLKQQGFIERQEVKQMVVATL ESGMNL D VIE IIDK  
Sbjct: 121 DDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTF 172

>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein Atcbl2 From Arabidopsis Thaliana Length = 189

Iteration: 1
 Score =  260 bits (664), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 129/141 (91%), Positives = 132/141 (93%)
Query: 32  DPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF 91
           DPE LAR+TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF
Sbjct: 1   DPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF 60
Query: 92  DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT 151
           DLFDTKHNGIL FEEFARALS+FHPN+PIDDKI FSFQLYDLKQQGFIERQEVKQMVVAT
Sbjct: 61  DLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVAT 120
Query: 152 LTESGMNLSDDVIESIIDKVL 172
           L ESGMNL D VIE IIDK  
Sbjct: 121 LAESGMNLKDTVIEDIIDKTF 141

>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein Kinase Atsos2 Bound To The Calcium Sensor Atsos3 Length = 207

Iteration: 1
 Score =  195 bits (496), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 88/147 (59%), Positives = 122/147 (82%)
Query: 26  QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL 85
           +P G EDPE LA  T F+V E+EALYELFKK+SS++IDDGLI+KEEFQLALF+   + +L
Sbjct: 15  RPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNL 74
Query: 86  FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 145
           FADR+FD+FD K NG+++F EF R+L +FHP++P+ +K++F+F+LYDL+Q GFIER+E+K
Sbjct: 75  FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELK 134
Query: 146 QMVVATLTESGMNLSDDVIESIIDKVL 172
           +MVVA L ES + LS+D+IE ++DK  
Sbjct: 135 EMVVALLHESELVLSEDMIEVMVDKAF 161

>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With Calcium(Ii) And Manganese(Ii) Ions Length = 222

Iteration: 1
 Score =  195 bits (495), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 88/147 (59%), Positives = 122/147 (82%)
Query: 26  QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL 85
           +P G EDPE LA  T F+V E+EALYELFKK+SS++IDDGLI+KEEFQLALF+   + +L
Sbjct: 15  RPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNL 74
Query: 86  FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 145
           FADR+FD+FD K NG+++F EF R+L +FHP++P+ +K++F+F+LYDL+Q GFIER+E+K
Sbjct: 75  FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELK 134
Query: 146 QMVVATLTESGMNLSDDVIESIIDKVL 172
           +MVVA L ES + LS+D+IE ++DK  
Sbjct: 135 EMVVALLHESELVLSEDMIEVMVDKAF 161

>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1 (Kchip-1) Length = 224

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 10/127 (7%)
Query: 26  QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKE 83
           +P GLE  EA   +T F+  E++ LY  FK    +    G++N+E F+   A F  +   
Sbjct: 35  RPEGLEQLEA---QTNFTKRELQVLYRGFKNECPS----GVVNEETFKQIYAQFFPHGDA 87
Query: 84  SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQE 143
           S +A  +F+ FDT   G + FE+F  ALSI    + + +K+ ++F LYD+ + G+I ++E
Sbjct: 88  STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEE 146
Query: 144 VKQMVVA 150
           +  +V A
Sbjct: 147 MMDIVKA 153

>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2 N1-30 Length = 183

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 10/127 (7%)
Query: 26  QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKE 83
           +P GLE  EA   +T F+  E++ LY  FK    +    G++N+E F+   A F  +   
Sbjct: 2   RPEGLEQLEA---QTNFTKRELQVLYRGFKNEXPS----GVVNEETFKQIYAQFFPHGDA 54
Query: 84  SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQE 143
           S +A  +F+ FDT   G + FE+F  ALSI    + + +K+ ++F LYD+ + G+I ++E
Sbjct: 55  STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEE 113
Query: 144 VKQMVVA 150
           +  +V A
Sbjct: 114 MMDIVKA 120

>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form Length = 190

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 36  LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDL 93
           L R T F   E++  Y+ F K   +    G +NK EFQ     F      S FA+ VF++
Sbjct: 16  LVRSTRFDKKELQQWYKGFFKDCPS----GHLNKSEFQKIYKQFFPFGDPSAFAEYVFNV 71
Query: 94  FDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT 153
           FD   NG +DF+EF  ALS+      ++DK+ ++FQLYDL   G I   E+ ++V A   
Sbjct: 72  FDADKNGYIDFKEFICALSV-TSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYK 130
Query: 154 ESGMNLS----DDVIESIIDKVLSLI 175
             G  +     +D  E  ++K+ +++
Sbjct: 131 MVGSMVKLPEDEDTPEKRVNKIFNMM 156

>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow Inactivation Length = 229

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 10/126 (7%)
Query: 21  ADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFK 78
           A +  +P  LE  EA ++   F+  E++ LY  FK    +    G++N+E F+   + F 
Sbjct: 43  ATVRHRPEALELLEAQSK---FTKKELQILYRGFKNECPS----GVVNEETFKEIYSQFF 95
Query: 79  TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGF 138
                + +A  +F+ FDT HNG + FE+F + LSI    + + +K+ ++F LYD+ + G+
Sbjct: 96  PQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGT-VQEKLNWAFNLYDINKDGY 154
Query: 139 IERQEV 144
           I ++E+
Sbjct: 155 ITKEEM 160

>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex With Its Regulatory Subunit Kchip1 (Casp Target) Length = 180

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 70/124 (56%), Gaps = 10/124 (8%)
Query: 29  GLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLF 86
           GLE  EA   +T F+  E++ LY  FK    +    G++N++ F+   A F  +   S +
Sbjct: 2   GLEQLEA---QTNFTKRELQVLYRGFKNECPS----GVVNEDTFKQIYAQFFPHGDASTY 54
Query: 87  ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 146
           A  +F+ FDT   G + FE+F  ALSI    + + +K+ ++F LYD+ + G+I ++E+  
Sbjct: 55  AHYLFNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEEMMD 113
Query: 147 MVVA 150
           +V A
Sbjct: 114 IVKA 117

>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX Length = 180

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 70/124 (56%), Gaps = 10/124 (8%)
Query: 29  GLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLF 86
           GLE  EA   +T F+  E++ LY  FK    +    G++N++ F+   A F  +   S +
Sbjct: 2   GLEQLEA---QTNFTKRELQVLYRGFKNECPS----GVVNEDTFKQIYAQFFPHGDASTY 54
Query: 87  ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 146
           A  +F+ FDT   G + FE+F  ALSI    + + +K+ ++F LYD+ + G+I ++E+  
Sbjct: 55  AHYLFNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEEMMD 113
Query: 147 MVVA 150
           +V A
Sbjct: 114 IVKA 117

>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 169

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 42  FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGI 101
           F   EI+ L + FKK+   + + G ++ EEF ++L +   +++    RV D+FDT  NG 
Sbjct: 14  FDADEIKRLGKRFKKLD--LDNSGSLSVEEF-MSLPEL--QQNPLVQRVIDIFDTDGNGE 68
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
           +DF+EF   +S F      + K+ F+F++YD+ + G+I   E+ Q++   +   G NL D
Sbjct: 69  VDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKD 125
Query: 162 DVIESIIDKVL 172
             ++ I+DK +
Sbjct: 126 TQLQQIVDKTI 136

>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 170

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 42  FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGI 101
           F   EI+ L + FKK+   + + G ++ EEF ++L +   +++    RV D+FDT  NG 
Sbjct: 15  FDADEIKRLGKRFKKLD--LDNSGSLSVEEF-MSLPEL--QQNPLVQRVIDIFDTDGNGE 69
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
           +DF+EF   +S F      + K+ F+F++YD+ + G+I   E+ Q++   +   G NL D
Sbjct: 70  VDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKD 126
Query: 162 DVIESIIDKVL 172
             ++ I+DK +
Sbjct: 127 TQLQQIVDKTI 137

>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium Sensor 1) Length = 190

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 34  EALARETVFSVSEIEALYELF-KKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFD 92
           E L R+T F+  E++  Y+ F K   S  +D     K   Q   F    K   FA  VF+
Sbjct: 14  EELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTK---FATFVFN 70
Query: 93  LFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL 152
           +FD   +G ++F EF +ALS+    + +D+K+ ++F+LYDL   G+I R E+  +V A  
Sbjct: 71  VFDENKDGRIEFSEFIQALSVTSRGT-LDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIY 129
Query: 153 TESGMNL----SDDVIESIIDKVLSLI 175
              G  +     ++  E  +D++ +++
Sbjct: 130 QMVGNTVELPEEENTPEKRVDRIFAMM 156

>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 155

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 74/127 (58%), Gaps = 8/127 (6%)
Query: 46  EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFE 105
           EI+ L + FKK+   + + G ++ EEF ++L +   +++    RV D+FDT  NG +DF+
Sbjct: 4   EIKRLGKRFKKLD--LDNSGSLSVEEF-MSLPEL--QQNPLVQRVIDIFDTDGNGEVDFK 58
Query: 106 EFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIE 165
           EF   +S F      + K+ F+F++YD+ + G+I   E+ Q++   +   G NL D  ++
Sbjct: 59  EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQ 115
Query: 166 SIIDKVL 172
            I+DK +
Sbjct: 116 QIVDKTI 122

>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 156

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 74/127 (58%), Gaps = 8/127 (6%)
Query: 46  EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFE 105
           EI+ L + FKK+   + + G ++ EEF ++L +   +++    RV D+FDT  NG +DF+
Sbjct: 5   EIKRLGKRFKKLD--LDNSGSLSVEEF-MSLPEL--QQNPLVQRVIDIFDTDGNGEVDFK 59
Query: 106 EFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIE 165
           EF   +S F      + K+ F+F++YD+ + G+I   E+ Q++   +   G NL D  ++
Sbjct: 60  EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQ 116
Query: 166 SIIDKVL 172
            I+DK +
Sbjct: 117 QIVDKTI 123

>pdb|2JUL|A Chain A, Nmr Structure Of Dream Length = 256

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 10/121 (8%)
Query: 26  QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQL--ALFKTNKKE 83
           QP GL+  +A   +T F+  E+++LY  FK         GL++++ F+L  + F      
Sbjct: 75  QPEGLDQLQA---QTKFTKKELQSLYRGFKNECPT----GLVDEDTFKLIYSQFFPQGDA 127
Query: 84  SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQE 143
           + +A  +F+ FD   NG + FE+F   LSI    + + +K++++F LYD+ + G I ++E
Sbjct: 128 TTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGT-VHEKLKWAFNLYDINKDGCITKEE 186
Query: 144 V 144
           +
Sbjct: 187 M 187

>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1 (Chp1) Length = 208

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 31/161 (19%)
Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ----LALFKTNKKESLF 86
           E+ E + +ET FS S+I  LY  F  +     ++G +++E+FQ    LA+       +  
Sbjct: 12  EELEEIKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIPELAI-------NPL 62
Query: 87  ADRVFDLFDTKHNGILDFEEFARALSIFHP----------NSP-----IDDKIEFSFQLY 131
            DR+ + F ++    ++F  F R L+ F P          N P       +K+ F+F+LY
Sbjct: 63  GDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLY 122
Query: 132 DLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           DL +   I R E+ Q++   +   G+N+SD+ + SI D+ +
Sbjct: 123 DLDKDDKISRDELLQVLRMMV---GVNISDEQLGSIADRTI 160

>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+ Exchanger 1 Complexed With Essential Cofactor Calcineurin B Homologous Protein 1 Length = 195

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 31/161 (19%)
Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ----LALFKTNKKESLF 86
           E+ E + +ET FS S+I  LY  F  +     ++G +++E+FQ    LA+       +  
Sbjct: 12  EELEEIKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIPELAI-------NPL 62
Query: 87  ADRVFDLFDTKHNGILDFEEFARALSIFHP----------NSP-----IDDKIEFSFQLY 131
            DR+ + F  +    ++F  F R L+ F P          N P       +K+ F+F+LY
Sbjct: 63  GDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLY 122
Query: 132 DLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           DL +   I R E+ Q++   +   G+N+SD+ + SI D+ +
Sbjct: 123 DLDKDEKISRDELLQVLRMMV---GVNISDEQLGSIADRTI 160

>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At C-Terminus) With Calcium Bound To Ef-Hand 3 Length = 189

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 34  EALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVF 91
           E L   T F+  E+ + Y+ F K   +    G I ++EFQ   + F        +A  VF
Sbjct: 14  EELQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVF 69
Query: 92  DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
             FD   +G LDF+E+  AL +       + K+E++F LYD+   G I + EV ++V A
Sbjct: 70  RSFDANSDGTLDFKEYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127

>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase Length = 202

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 34  EALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVF 91
           E L   T F+  E+ + Y+ F K   +    G I ++EFQ   + F        +A  VF
Sbjct: 15  EELQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVF 70
Query: 92  DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
             FD   +G LDF+E+  AL +       + K+E++F LYD+   G I + EV ++V A
Sbjct: 71  RSFDANSDGTLDFKEYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 128

>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium Bound To Ef- Hand 3 Length = 201

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 34  EALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVF 91
           E L   T F+  E+ + Y+ F K   +    G I ++EFQ   + F        +A  VF
Sbjct: 14  EELQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVF 69
Query: 92  DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
             FD   +G LDF+E+  AL +       + K+E++F LYD+   G I + EV ++V A
Sbjct: 70  RSFDANSDGTLDFKEYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127

>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24 Structures Length = 201

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 34  EALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVF 91
           E L   T F+  E+ + Y+ F K   +    G I ++EFQ   + F        +A  VF
Sbjct: 14  EELQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVF 69
Query: 92  DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
             FD   +G LDF+E+  AL +       + K+E++F LYD+   G I + EV ++V A
Sbjct: 70  RSFDANSDGTLDFKEYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127

>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta At 2.4 Angstroms Length = 193

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 36  LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDL 93
           L   T F+  EI+  Y+ F +   +    G ++ EEF+     F      S FA+ VF  
Sbjct: 16  LLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYGNFFPYGDASKFAEHVFRT 71
Query: 94  FDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--T 151
           FD   +G +DF EF  ALS+      ++ K++++F +YDL   G+I + E+ ++V A   
Sbjct: 72  FDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYK 130
Query: 152 LTESGMNLSDD 162
           +  S M + +D
Sbjct: 131 MVSSVMKMPED 141

>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With Calcium Bound To Ef-Hand 3 Length = 201

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 34  EALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVF 91
           E L   T F+  E+ + Y+ F K   +    G I ++EFQ   + F        +A  VF
Sbjct: 14  EELQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVF 69
Query: 92  DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
             FD   +G LDF+++  AL +       + K+E++F LYD+   G I + EV ++V A
Sbjct: 70  RSFDANSDGTLDFKQYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127

>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q Length = 201

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 34  EALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVF 91
           E L   T F+  E+ + Y+ F K   +    G I ++EFQ   + F        +A  VF
Sbjct: 14  EELQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVF 69
Query: 92  DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
             FD   +G LDF+++  AL +       + K+E++F LYD+   G I + EV ++V A
Sbjct: 70  RSFDANSDGTLDFKQYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127

>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution Length = 207

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 34  EALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVF 91
           E L   T FS  E+ + Y+ F K        G I +++FQ   A F  +     +A  VF
Sbjct: 22  EELQLNTKFSEEELCSWYQSFLKDCPT----GRITQQQFQSIYAKFFPDTDPKAYAQHVF 77
Query: 92  DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
             FD+  +G LDF+E+  AL         + K+E++F LYD+   G I + EV ++V A
Sbjct: 78  RSFDSNLDGTLDFKEYVIALHXTTAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVXA 135

>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin Length = 190

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEF---QLALFKTNKKESLFA 87
           +D   L + T F   EI+  ++ F +   +    G + +E+F       F     E  FA
Sbjct: 11  DDLTCLKQSTYFDRREIQQWHKGFLRDCPS----GQLAREDFVKIYKQFFPFGSPED-FA 65
Query: 88  DRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQM 147
           + +F +FD  +NG + FEEF   LS       +++K+ ++F+LYDL   G+I   E+  +
Sbjct: 66  NHLFTVFDKDNNGFIHFEEFITVLST-TSRGTLEEKLSWAFELYDLNHDGYITFDEMLTI 124
Query: 148 VVATLTESG----MNLSDDVIESIIDKVLSLI 175
           V +     G    +N  +   E  + K+  L+
Sbjct: 125 VASVYKMMGSMVTLNEDEATPEMRVKKIFKLM 156

>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating Protein-3 Length = 211

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 65  GLINKEEFQ--LALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDD 122
           GL    EF+  L L   N+K +   D+V++ FDT  +G +DF EF  A+++      ++ 
Sbjct: 35  GLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIM-QEKMEQ 93
Query: 123 KIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG 156
           K+++ F+LYD    G I++ E+  M +A    +G
Sbjct: 94  KLKWYFKLYDADGNGSIDKNELLDMFMAVQALNG 127

>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding Region In Nhe1 And Insights Into The Mechanism Of Ph Regulation Length = 202

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 26/160 (16%)
Query: 30  LEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ-LALFKTNKKESLFAD 88
           + D +++ RET FS + +  L+  F+ +       G +++ + Q +     N       D
Sbjct: 11  IPDGDSIRRETGFSQASLLRLHHRFRALDRN--KKGYLSRMDLQQIGALAVNP----LGD 64
Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHP-------------NSPID---DKIEFSFQLYD 132
           R+ + F    +  +DF  F R L+ F P               P++   +K+ ++FQLYD
Sbjct: 65  RIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYD 124
Query: 133 LKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           L + G I R E+ Q++   +   G+ ++++ +E+I D+ +
Sbjct: 125 LDRDGKISRHEMLQVLRLMV---GVQVTEEQLENIADRTV 161

>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With Calcium Bound Length = 198

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 86  FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 145
           + +++F+ FD   +G +DF E+  ALS+      +D K+ + F+LYD+   G I+R E+ 
Sbjct: 53  YVEQMFETFDFNKDGYIDFMEYVAALSLV-LKGKVDQKLRWYFKLYDVDGNGCIDRGELL 111
Query: 146 QMVVA 150
            ++ A
Sbjct: 112 NIIKA 116

>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound Length = 204

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 80  NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFI 139
           N++ + + + +F  FDT  +  +DF E+  AL++    + ++ K++++F++YD  + G I
Sbjct: 54  NEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGT-LEHKLKWTFKIYDKDRNGCI 112
Query: 140 ERQEVKQMV 148
           +RQE+  +V
Sbjct: 113 DRQELLDIV 121

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	178
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	3e-65
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	2e-52
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	2e-38
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	2e-37
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	3e-37
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	4e-37
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	1e-35
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	8e-35
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	1e-34
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	3e-34
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	6e-34
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	1e-33
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	2e-33
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	3e-33
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	6e-33
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	1e-32
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	2e-32
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	3e-30
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	9e-30
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-12
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-12
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-12
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	6e-12
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	9e-12
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	2e-11
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	2e-11
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	2e-11
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	8e-11
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	2e-10
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	4e-10
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	2e-09
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	2e-09
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	3e-09
1y1x_A	191	Leishmania major homolog of programmed cell death	4e-09
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	5e-09
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	5e-09
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	4e-08
2hps_A	186	Coelenterazine-binding protein with bound coelent;	7e-09
2hps_A	186	Coelenterazine-binding protein with bound coelent;	9e-05
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	3e-08
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	1e-07
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	1e-05
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	8e-04
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	2e-07
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	2e-07
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	6e-04
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	2e-07
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	4e-07
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	5e-07
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	5e-07
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	5e-07
3fwb_A	161	Cell division control protein 31; gene gating, com	8e-07
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	9e-07
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	1e-06
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	2e-06
2jnf_A	158	Troponin C; stretch activated muscle contraction,	2e-06
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	2e-06
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	3e-06
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	3e-06
3li6_A	66	Calcium-binding protein; calcium signaling protein	4e-06
3li6_A	66	Calcium-binding protein; calcium signaling protein	7e-05
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	6e-06
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	6e-06
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	6e-06
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	6e-06
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	8e-06
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	8e-04
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	8e-06
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	9e-06
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	6e-05
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	1e-05
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	1e-05
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	5e-04
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	2e-05
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	2e-05
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	2e-05
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	2e-05
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	2e-05
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	3e-05
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	5e-05
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	5e-05
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	8e-05
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	8e-05
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	8e-05
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	4e-04
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	8e-05
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	8e-05
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	8e-05
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	1e-04
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	1e-04
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	1e-04
1c07_A	95	Protein (epidermal growth factor receptor pathway	1e-04
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	1e-04
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	2e-04
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	2e-04
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	2e-04
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	2e-04
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	2e-04
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	2e-04
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	2e-04
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	2e-04
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	2e-04
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	2e-04
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	3e-04
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	3e-04
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	3e-04
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	3e-04
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	4e-04
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	4e-04
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	4e-04
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	5e-04
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	5e-04
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	6e-04
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	6e-04
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	7e-04

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226

 Score =  198 bits (506), Expect = 3e-65
 Identities = 147/173 (84%), Positives = 153/173 (88%)

Query: 1   MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
           M QC+DG+KH C  V+ C D DLYKQ  GL DPE LAR+TVFSVSEIEALYELFKKISSA
Sbjct: 1   MSQCVDGIKHLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSA 60

Query: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
           VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL FEEFARALS+FHPN+PI
Sbjct: 61  VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPI 120

Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLS 173
           DDKI FSFQLYDLKQQGFIERQEVKQMVVATL ESGMNL D VIE IIDK   
Sbjct: 121 DDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFE 173

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207

 Score =  165 bits (419), Expect = 2e-52
 Identities = 88/149 (59%), Positives = 122/149 (81%)

Query: 25  KQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES 84
            +P G EDPE LA  T F+V E+EALYELFKK+SS++IDDGLI+KEEFQLALF+   + +
Sbjct: 14  MRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRN 73

Query: 85  LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEV 144
           LFADR+FD+FD K NG+++F EF R+L +FHP++P+ +K++F+F+LYDL+Q GFIER+E+
Sbjct: 74  LFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREEL 133

Query: 145 KQMVVATLTESGMNLSDDVIESIIDKVLS 173
           K+MVVA L ES + LS+D+IE ++DK   
Sbjct: 134 KEMVVALLHESELVLSEDMIEVMVDKAFV 162

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183

 Score =  128 bits (324), Expect = 2e-38
 Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 5/148 (3%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAV---IDDGLINKEEFQLALFKTNKKESLFA 87
           E        T  +  EI   +  F ++       ++  L  +  F+  L     K + F 
Sbjct: 3   ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFK 62

Query: 88  DRVFDLFDTK-HNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 146
           +R+  +F T      L FE+F   LS+F   +  D K  ++F+++D    G + R+++ +
Sbjct: 63  ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSR 122

Query: 147 MVVATLTE-SGMNLSDDVIESIIDKVLS 173
           +V     E     LS   ++ +ID +L 
Sbjct: 123 LVNCLTGEGEDTRLSASEMKQLIDNILE 150

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208

 Score =  127 bits (320), Expect = 2e-37
 Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 23/158 (14%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRV 90
           E+ E + +ET FS S+I  LY  F  +     ++G +++E+FQ          +   DR+
Sbjct: 12  EELEEIKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIP---ELAINPLGDRI 66

Query: 91  FDLFDTKHNGILDFEEFARALSIFHPNSPI---------------DDKIEFSFQLYDLKQ 135
            + F ++    ++F  F R L+ F P                    +K+ F+F+LYDL +
Sbjct: 67  INAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDK 126

Query: 136 QGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLS 173
              I R E+ Q++   +   G+N+SD+ + SI D+ + 
Sbjct: 127 DDKISRDELLQVLRMMV---GVNISDEQLGSIADRTIQ 161

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214

 Score =  126 bits (319), Expect = 3e-37
 Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 5/148 (3%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAV---IDDGLINKEEFQLALFKTNKKESLFA 87
           E        T  +  EI   +  F ++       ++  L  +  F+  L     K + F 
Sbjct: 34  ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFK 93

Query: 88  DRVFDLFDT-KHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 146
           +R+  +F T      L FE+F   LS+F   +  D K  ++F+++D    G + R+++ +
Sbjct: 94  ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSR 153

Query: 147 MVVATLTE-SGMNLSDDVIESIIDKVLS 173
           +V     E     LS   ++ +ID +L 
Sbjct: 154 LVNCLTGEGEDTRLSASEMKQLIDNILE 181

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211

 Score =  126 bits (318), Expect = 4e-37
 Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 9/147 (6%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFAD 88
                   +      E    Y  F          GL    EF+  L L   N+K +   D
Sbjct: 5   NGKSIAGDQKAVPTQETHVWYRTFMMEYP----SGLQTLHEFKTLLGLQGLNQKANKHID 60

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
           +V++ FDT  +G +DF EF  A+++       + K+++ F+LYD    G I++ E+  M 
Sbjct: 61  QVYNTFDTNKDGFVDFLEFIAAVNLIMQEKM-EQKLKWYFKLYDADGNGSIDKNELLDMF 119

Query: 149 VATLTESGMNLSDDVIESIIDKVLSLI 175
           +A    +G        E  I+ V   I
Sbjct: 120 MAVQALNGQQTLSP--EEFINLVFHKI 144

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183

 Score =  121 bits (306), Expect = 1e-35
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 11/151 (7%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFAD 88
           E  E L  +T F+  E++ LY  FK         G++N+E F+   A F  +   S +A 
Sbjct: 4   EGLEQLEAQTNFTKRELQVLYRGFKNEX----PSGVVNEETFKQIYAQFFPHGDASTYAH 59

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
            +F+ FDT   G + FE+F  ALSI    +   +K+ ++F LYD+ + G+I ++E+  +V
Sbjct: 60  YLFNAFDTTQTGSVKFEDFVTALSILLRGTV-HEKLRWTFNLYDINKDGYINKEEMMDIV 118

Query: 149 VATLTESGMN----LSDDVIESIIDKVLSLI 175
            A     G      L +D     +D     +
Sbjct: 119 KAIYDMMGKYTYPVLKEDTPRQHVDVFFQKM 149

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229

 Score =  121 bits (304), Expect = 8e-35
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 11/152 (7%)

Query: 30  LEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFA 87
            E  E L  ++ F+  E++ LY  FK         G++N+E F+   + F      + +A
Sbjct: 49  PEALELLEAQSKFTKKELQILYRGFKNECP----SGVVNEETFKEIYSQFFPQGDSTTYA 104

Query: 88  DRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQM 147
             +F+ FDT HNG + FE+F + LSI    +   +K+ ++F LYD+ + G+I ++E+  +
Sbjct: 105 HFLFNAFDTDHNGAVSFEDFIKGLSILLRGTV-QEKLNWAFNLYDINKDGYITKEEMLDI 163

Query: 148 VVATLTESGMN----LSDDVIESIIDKVLSLI 175
           + A     G      L +D     ++     +
Sbjct: 164 MKAIYDMMGKCTYPVLKEDAPRQHVETFFQKM 195

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198

 Score =  119 bits (300), Expect = 1e-34
 Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 8/142 (5%)

Query: 36  LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDL 93
                  S +E    Y+ F          G +   EF+    L   +   + + +++F+ 
Sbjct: 5   SKAVEELSATECHQWYKKFMTECP----SGQLTLYEFKQFFGLKNLSPSANKYVEQMFET 60

Query: 94  FDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT 153
           FD   +G +DF E+  ALS+       D K+ + F+LYD+   G I+R E+  ++ A   
Sbjct: 61  FDFNKDGYIDFMEYVAALSLVLKGKV-DQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRA 119

Query: 154 ESGMNLSDDVIESIIDKVLSLI 175
            +  N      E   + V   I
Sbjct: 120 INRCN-EAMTAEEFTNMVFDKI 140

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score =  118 bits (298), Expect = 3e-34
 Identities = 30/156 (19%), Positives = 68/156 (43%), Gaps = 15/156 (9%)

Query: 30  LEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL-FKTNKKESLFAD 88
            E+ E          ++++  Y+ F +        G +   EF+       N++ + + +
Sbjct: 7   WEEAEENGAVGAADAAQLQEWYKKFLEECP----SGTLFMHEFKRFFKVPDNEEATQYVE 62

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
            +F  FDT  +  +DF E+  AL++    +  + K++++F++YD  + G I+RQE+  +V
Sbjct: 63  AMFRAFDTNGDNTIDFLEYVAALNLVLRGTL-EHKLKWTFKIYDKDRNGCIDRQELLDIV 121

Query: 149 VATLTESG---------MNLSDDVIESIIDKVLSLI 175
            +                       E ++D++  L+
Sbjct: 122 ESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLV 157

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202

 Score =  117 bits (296), Expect = 6e-34
 Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 24/163 (14%)

Query: 26  QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL 85
               + D +++ RET FS + +  L+  F+ +       G +++ + Q          + 
Sbjct: 7   HAAVIPDGDSIRRETGFSQASLLRLHHRFRALDRN--KKGYLSRMDLQQIGAL---AVNP 61

Query: 86  FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI----------------DDKIEFSFQ 129
             DR+ + F    +  +DF  F R L+ F P                     +K+ ++FQ
Sbjct: 62  LGDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQ 121

Query: 130 LYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
           LYDL + G I R E+ Q++   +   G+ ++++ +E+I D+ +
Sbjct: 122 LYDLDRDGKISRHEMLQVLRLMV---GVQVTEEQLENIADRTV 161

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190

 Score =  116 bits (293), Expect = 1e-33
 Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 11/149 (7%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFAD 88
           +  + L R T F   E++  Y+ F K        G +NK EFQ     F      S FA+
Sbjct: 11  DQLQDLVRSTRFDKKELQQWYKGFFKDCP----SGHLNKSEFQKIYKQFFPFGDPSAFAE 66

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
            VF++FD   NG +DF+EF  ALS+       +DK+ ++FQLYDL   G I   E+ ++V
Sbjct: 67  YVFNVFDADKNGYIDFKEFICALSVTSRGEL-NDKLIWAFQLYDLDNNGLISYDEMLRIV 125

Query: 149 VATLTESG----MNLSDDVIESIIDKVLS 173
            A     G    +   +D  E  ++K+ +
Sbjct: 126 DAIYKMVGSMVKLPEDEDTPEKRVNKIFN 154

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193

 Score =  116 bits (292), Expect = 2e-33
 Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFAD 88
           E  + L   T F+  EI+  Y+ F +        G ++ EEF+     F      S FA+
Sbjct: 11  EVMQDLLESTDFTEHEIQEWYKGFLRDCP----SGHLSMEEFKKIYGNFFPYGDASKFAE 66

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
            VF  FD   +G +DF EF  ALS+      ++ K++++F +YDL   G+I + E+ ++V
Sbjct: 67  HVFRTFDANGDGTIDFREFIIALSVTS-RGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125

Query: 149 VATLTESG----MNLSDDVIESIIDKVLSLI 175
            A          M   +   E   +K+   +
Sbjct: 126 QAIYKMVSSVMKMPEDESTPEKRTEKIFRQM 156

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224

 Score =  117 bits (293), Expect = 3e-33
 Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFAD 88
           E  E L  +T F+  E++ LY  FK         G++N+E F+   A F  +   S +A 
Sbjct: 37  EGLEQLEAQTNFTKRELQVLYRGFKNECP----SGVVNEETFKQIYAQFFPHGDASTYAH 92

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
            +F+ FDT   G + FE+F  ALSI    +   +K+ ++F LYD+ + G+I ++E+  +V
Sbjct: 93  YLFNAFDTTQTGSVKFEDFVTALSILLRGTV-HEKLRWTFNLYDINKDGYINKEEMMDIV 151

Query: 149 VATLTESGMN----LSDDVIESIIDKVLS 173
            A     G      L +D     +D    
Sbjct: 152 KAIYDMMGKYTYPVLKEDTPRQHVDVFFQ 180

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190

 Score =  114 bits (288), Expect = 6e-33
 Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 11/151 (7%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFAD 88
           E  E L R+T F+  E++  Y+ F K        G ++   FQ     F      + FA 
Sbjct: 11  EVVEELTRKTYFTEKEVQQWYKGFIKDCP----SGQLDAAGFQKIYKQFFPFGDPTKFAT 66

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
            VF++FD   +G ++F EF +ALS+    +  D+K+ ++F+LYDL   G+I R E+  +V
Sbjct: 67  FVFNVFDENKDGRIEFSEFIQALSVTSRGTL-DEKLRWAFKLYDLDNDGYITRNEMLDIV 125

Query: 149 VATL----TESGMNLSDDVIESIIDKVLSLI 175
            A          +   ++  E  +D++ +++
Sbjct: 126 DAIYQMVGNTVELPEEENTPEKRVDRIFAMM 156

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190

 Score =  114 bits (287), Expect = 1e-32
 Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 11/151 (7%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFAD 88
           +D   L + T F   EI+  ++ F +        G + +E+F      F        FA+
Sbjct: 11  DDLTCLKQSTYFDRREIQQWHKGFLRDCP----SGQLAREDFVKIYKQFFPFGSPEDFAN 66

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
            +F +FD  +NG + FEEF   LS     +  ++K+ ++F+LYDL   G+I   E+  +V
Sbjct: 67  HLFTVFDKDNNGFIHFEEFITVLSTTSRGTL-EEKLSWAFELYDLNHDGYITFDEMLTIV 125

Query: 149 VATLTESG----MNLSDDVIESIIDKVLSLI 175
            +     G    +N  +   E  + K+  L+
Sbjct: 126 ASVYKMMGSMVTLNEDEATPEMRVKKIFKLM 156

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256

 Score =  115 bits (290), Expect = 2e-32
 Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 14/159 (8%)

Query: 23  LYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTN 80
           +  QP GL+    L  +T F+  E+++LY  FK         GL++++ F+   + F   
Sbjct: 72  VRHQPEGLDQ---LQAQTKFTKKELQSLYRGFKNECP----TGLVDEDTFKLIYSQFFPQ 124

Query: 81  KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIE 140
              + +A  +F+ FD   NG + FE+F   LSI    +   +K++++F LYD+ + G I 
Sbjct: 125 GDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTV-HEKLKWAFNLYDINKDGCIT 183

Query: 141 RQEVKQMVVATLTESGMN----LSDDVIESIIDKVLSLI 175
           ++E+  ++ +     G +    L +D     +++    +
Sbjct: 184 KEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKM 222

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207

 Score =  108 bits (271), Expect = 3e-30
 Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 13/153 (8%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFAD 88
           E  E L   T FS  E+ + Y+ F K        G I +++FQ   A F  +     +A 
Sbjct: 19  EILEELQLNTKFSEEELCSWYQSFLKDCP----TGRITQQQFQSIYAKFFPDTDPKAYAQ 74

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
            VF  FD+  +G LDF+E+  AL +       + K+E++F LYD+   G I + EV ++V
Sbjct: 75  HVFRSFDSNLDGTLDFKEYVIALHMTT-AGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 133

Query: 149 VATLTESG------MNLSDDVIESIIDKVLSLI 175
           +A            +   ++  E   +K+    
Sbjct: 134 MAIFKMITPEDVKLLPDDENTPEKRAEKIWKYF 166

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155

 Score =  105 bits (265), Expect = 9e-30
 Identities = 40/128 (31%), Positives = 70/128 (54%), Gaps = 8/128 (6%)

Query: 46  EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFE 105
           EI+ L + FKK+   + + G ++ EEF         +++    RV D+FDT  NG +DF+
Sbjct: 4   EIKRLGKRFKKLD--LDNSGSLSVEEFMSLP---ELQQNPLVQRVIDIFDTDGNGEVDFK 58

Query: 106 EFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIE 165
           EF   +S F      + K+ F+F++YD+ + G+I   E+ Q++   +   G NL D  ++
Sbjct: 59  EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQ 115

Query: 166 SIIDKVLS 173
            I+DK + 
Sbjct: 116 QIVDKTII 123

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 63.6 bits (155), Expect = 2e-12
 Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 18/142 (12%)

Query: 39  ETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF---------ADR 89
             + S  E + L ++F+ I      DG ++++E      K + +E             D 
Sbjct: 337 SKLTSQEETKELTDIFRHIDKN--GDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDA 394

Query: 90  VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV 149
           +    D   NG +D+ EF   +++   +    DK+E +FQ +D    G I   E+  +  
Sbjct: 395 ILGAADFDRNGYIDYSEFV-TVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF- 452

Query: 150 ATLTESGMNLSDDVIESIIDKV 171
                   +L     + +I  +
Sbjct: 453 -----GLDHLESKTWKEMISGI 469

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 63.2 bits (154), Expect = 2e-12
 Identities = 24/145 (16%), Positives = 57/145 (39%), Gaps = 21/145 (14%)

Query: 39  ETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF------------ 86
             + S  E + L  +F K+      DG +++ E      +  + +               
Sbjct: 326 SKLTSQDETKELTAIFHKMDKN--GDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHE 383

Query: 87  ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 146
            D+V D  D   NG +++ EF   +++        +++E +F+++D    G I   E+  
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELAT 442

Query: 147 MVVATLTESGMNLSDDVIESIIDKV 171
           +          ++  +  +S++ +V
Sbjct: 443 IF------GVSDVDSETWKSVLSEV 461

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 62.8 bits (153), Expect = 3e-12
 Identities = 27/148 (18%), Positives = 71/148 (47%), Gaps = 22/148 (14%)

Query: 39  ETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF------------ 86
             + ++ E + L E+F+K+ +   +DG+++++E      +  + + +             
Sbjct: 322 SKLTTLDETKQLTEIFRKLDTN--NDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTI 379

Query: 87  ---ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQE 143
               D +  L D   +G +++ EF  A +I        +++E +F+++D    G I  +E
Sbjct: 380 EDQIDSLMPLLDMDGSGSIEYSEFI-ASAIDRTILLSRERMERAFKMFDKDGSGKISTKE 438

Query: 144 VKQMVVATLTESGMNLSDDVIESIIDKV 171
           + ++     +++  ++  + +ESII++V
Sbjct: 439 LFKL----FSQADSSIQMEELESIIEQV 462

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 62.0 bits (151), Expect = 6e-12
 Identities = 22/138 (15%), Positives = 57/138 (41%), Gaps = 18/138 (13%)

Query: 43  SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF---------ADRVFDL 93
           ++ E + L ++FKK+      DG ++K+E           ++            D +   
Sbjct: 350 TLEERKELTDIFKKLDKN--GDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKE 407

Query: 94  FDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT 153
            D   NG +++ EF  ++ +       ++++  +F L+D  + G I ++E+  +      
Sbjct: 408 VDFDKNGYIEYSEFI-SVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLF----- 461

Query: 154 ESGMNLSDDVIESIIDKV 171
               ++S+     ++ + 
Sbjct: 462 -GLTSISEKTWNDVLGEA 478

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score = 60.1 bits (146), Expect = 9e-12
 Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 21/140 (15%)

Query: 43  SVSEIEALYELFKKISSAVID---DGLINKEEFQLAL----FKTNKKESLFADRVFDLFD 95
             S I+ L   F+      +D      ++ +EF+  L       ++ E   A+ V   +D
Sbjct: 32  GASGIQGLARFFR-----QLDRDGSRSLDADEFRQGLAKLGLVLDQAE---AEGVCRKWD 83

Query: 96  TKHNGILDFEEFARALSIFHPNSPI-DDKIEFSFQLYDLKQQGFIERQEVKQMVVAT--- 151
              +G LD EEF RAL    P S   +  I  +F   D    G +   +++ +       
Sbjct: 84  RNGSGTLDLEEFLRALR--PPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHP 141

Query: 152 LTESGMNLSDDVIESIIDKV 171
              SG    D+V+   +D  
Sbjct: 142 KVRSGEWTEDEVLRRFLDNF 161

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220

 Score = 59.4 bits (144), Expect = 2e-11
 Identities = 25/151 (16%), Positives = 48/151 (31%), Gaps = 20/151 (13%)

Query: 24  YKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVID---DGLINKEEFQLALFKTN 80
           Y+ P  + +           + +   +Y+ F  +     D    G +   E  +  F   
Sbjct: 27  YQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGV-----DRDRSGTLEINELMMGQFPGG 81

Query: 81  KKESLFADRVF-DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFI 139
            + S         +FDT  NG + F EF  A+  F       +     F +    + G +
Sbjct: 82  IRLSPQTALRMMRIFDTDFNGHISFYEFM-AMYKFM------ELAYNLFVMNARARSGTL 134

Query: 140 ERQEVKQMVVATLTESGMNLSDDVIESIIDK 170
           E  E+       L + G  ++      +   
Sbjct: 135 EPHEILP----ALQQLGFYINQRTSLLLHRL 161

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score = 58.8 bits (143), Expect = 2e-11
 Identities = 23/129 (17%), Positives = 48/129 (37%), Gaps = 17/129 (13%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL 102
            I+ + ELF K+     D   +G ++  E    L     K+    +R+    D    G +
Sbjct: 37  HIKYINELFYKL-----DTNHNGSLSHREIYTVLASVGIKKW-DINRILQALDINDRGNI 90

Query: 103 DFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDD 162
            + EF          +     ++ +F   D  + G+I + ++  +V          L ++
Sbjct: 91  TYTEFMAGCY--RWKNIESTFLKAAFNKIDKDEDGYISKSDIVSLV------HDKVLDNN 142

Query: 163 VIESIIDKV 171
            I++    V
Sbjct: 143 DIDNFFLSV 151

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 59.0 bits (143), Expect = 2e-11
 Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 20/132 (15%)

Query: 45  SEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRV----FDLFDTKH 98
              + LY  F  ++     DG I+ +E Q  L +         F          + D   
Sbjct: 30  QTQDPLYGYFAAVAG---QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDM 86

Query: 99  NGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN 158
           +G + F EF    ++ +            F  +D  + G ++ QE+++     LT  G  
Sbjct: 87  SGTMGFNEFKELWAVLN-------GWRQHFISFDTDRSGTVDPQELQKA----LTTMGFR 135

Query: 159 LSDDVIESIIDK 170
           LS   + SI  +
Sbjct: 136 LSPQAVNSIAKR 147

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 56.6 bits (137), Expect = 8e-11
 Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 20/131 (15%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRV----FDLFDTKHNG 100
           ++ LY  F  ++     DG I+ +E Q  L +         F          + D   +G
Sbjct: 1   MDPLYGYFASVAG---QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSG 57

Query: 101 ILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLS 160
            + F EF    ++ +            F  +D  + G ++ QE+++     LT  G  L+
Sbjct: 58  TMGFNEFKELWAVLN-------GWRQHFISFDSDRSGTVDPQELQKA----LTTMGFRLN 106

Query: 161 DDVIESIIDKV 171
              + SI  + 
Sbjct: 107 PQTVNSIAKRY 117

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173

 Score = 55.5 bits (134), Expect = 2e-10
 Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 23/134 (17%)

Query: 46  EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFD---------LFDT 96
           E+     LF +++    DD  ++  E    L K   +        F          + D+
Sbjct: 2   EVRQFRRLFAQLAG---DDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDS 58

Query: 97  KHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG 156
              G L FEEF    +          K +  ++ +D+ + G I   E+          +G
Sbjct: 59  DTTGKLGFEEFKYLWNNIK-------KWQAIYKQFDVDRSGTIGSSELPGA----FEAAG 107

Query: 157 MNLSDDVIESIIDK 170
            +L++ +   II +
Sbjct: 108 FHLNEHLYSMIIRR 121

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 55.1 bits (133), Expect = 4e-10
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 20/128 (15%)

Query: 49  ALYELFKKISSAVIDDGLINKEEFQLALFKT--NKKESLFADRV----FDLFDTKHNGIL 102
           ++Y  F  ++     DG ++ EE Q  L ++  N   S F+         + D  H G +
Sbjct: 1   SVYTYFSAVAG---QDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKM 57

Query: 103 DFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDD 162
            F  F    +  +         + +F   D    G +E  E++Q     +   G  LS  
Sbjct: 58  GFNAFKELWAALN-------AWKENFMTVDQDGSGTVEHHELRQA----IGLMGYRLSPQ 106

Query: 163 VIESIIDK 170
            + +I+ +
Sbjct: 107 TLTTIVKR 114

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 19/130 (14%)

Query: 46  EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRV----FDLFDTKHNGI 101
           +   L+ +F+++       G+I+  E Q AL  +N   + F          +FD ++   
Sbjct: 5   DQSFLWNVFQRV--DKDRSGVISDTELQQAL--SNGTWTPFNPVTVRSIISMFDRENKAG 60

Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
           ++F EF                 +  F+ YD    G I++ E+KQ     L+  G  LSD
Sbjct: 61  VNFSEFTGVWKYI-------TDWQNVFRTYDRDNSGMIDKNELKQA----LSGFGYRLSD 109

Query: 162 DVIESIIDKV 171
              + +I K 
Sbjct: 110 QFHDILIRKF 119

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 18/136 (13%)

Query: 43  SVSEIEALYELFKKISSAVID---DGLINKEEFQLAL----FKTNKKESLFADRVFDLFD 95
              EI  L  +F  +     D    G ++ +E    L    ++    +     +V    D
Sbjct: 52  CDVEINNLRNIFIAL-----DVDNSGTLSSQEILDGLKKIGYQKIPPD---IHQVLRDID 103

Query: 96  TKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTES 155
           +  +G + + +F  A +I        +     F+ +D+   G I  +E+K++      + 
Sbjct: 104 SNASGQIHYTDFL-AATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGR--DDI 160

Query: 156 GMNLSDDVIESIIDKV 171
              L D  I+S++ +V
Sbjct: 161 ENPLIDKAIDSLLQEV 176

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179

 Score = 52.8 bits (126), Expect = 3e-09
 Identities = 20/121 (16%), Positives = 48/121 (39%), Gaps = 10/121 (8%)

Query: 48  EALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHN---GILDF 104
            A+ + F ++      DG++ +  F   +      E  FA ++FD    K      +L  
Sbjct: 28  AAVEKRFNQLQV----DGVLLRSRFGKCIGMDGSDE--FAVQMFDSLARKRGIVKQVLTK 81

Query: 105 EEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVI 164
           +E              D+++   F + D    G +  +EVK+++  + + + ++   +  
Sbjct: 82  DELKDFYEQLTDQGF-DNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERA 140

Query: 165 E 165
           +
Sbjct: 141 D 141

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score = 52.7 bits (127), Expect = 4e-09
 Identities = 25/155 (16%), Positives = 56/155 (36%), Gaps = 26/155 (16%)

Query: 24  YKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVID---DGLINKEEFQLAL---- 76
           +     +     +   +   +++ + L E F+ +     D    G I+  E   AL    
Sbjct: 3   HHHHHHMPTSTGVYAPSARHMNDNQELMEWFRAV-----DTDGSGAISVPELNAALSSAG 57

Query: 77  FKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQ 136
              +       +++  ++D  H+G + F+EF                +   F+  D    
Sbjct: 58  VPFSLAT---TEKLLHMYDKNHSGEITFDEFKDLHHF-------ILSMREGFRKRDSSGD 107

Query: 137 GFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV 171
           G ++  EV+      L  SG  +S+   ++++ K 
Sbjct: 108 GRLDSNEVRAA----LLSSGYQVSEQTFQALMRKF 138

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score = 52.3 bits (126), Expect = 5e-09
 Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 11/133 (8%)

Query: 43  SVSEIEALYELFKKISSAVID---DGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHN 99
           +  ++E L   F  +     D    G I KE+ +  L K   K     D + D  D+  +
Sbjct: 47  NDYDVEKLKSTFLVL-----DEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGS 101

Query: 100 GILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ-MVVATLTESGMN 158
           G +D+ EF  A             I  +F+++D+   G I   E+   +       +   
Sbjct: 102 GKIDYTEFIAAAL--DRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQ 159

Query: 159 LSDDVIESIIDKV 171
              + ++ +I  V
Sbjct: 160 RDVNRVKRMIRDV 172

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 53.3 bits (128), Expect = 5e-09
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 20/130 (15%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL 102
           ++ AL   F+      ID   +G ++++EF+    +    +    D +F   D   +  +
Sbjct: 186 DLAALVADFR-----KIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDV 240

Query: 103 DFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGM-NLSD 161
            F E+                +   +   D  + G + ++EV+++    L ++ +   + 
Sbjct: 241 GFSEYVHLGLCLL-------VLRILYAFADFDKSGQLSKEEVQKV----LEDAHIPESAR 289

Query: 162 DVIESIIDKV 171
              E     V
Sbjct: 290 KKFEHQFSVV 299

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 50.6 bits (121), Expect = 4e-08
 Identities = 16/133 (12%), Positives = 39/133 (29%), Gaps = 21/133 (15%)

Query: 43  SVSEIEALYELFKKISSAVID---DGLINKEEFQLALFKTNKKESLF-ADRVFDLFDTKH 98
           S  +   L +LF             G  + ++ +  L K           ++F + +   
Sbjct: 117 SEEDTNILRQLFLSS-----AVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDT 171

Query: 99  NGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN 158
            G + +             +     +   F+  D    G + R+E ++         G +
Sbjct: 172 KGRMSYITLVAV-------ANDLAALVADFRKIDTNSNGTLSRKEFREH----FVRLGFD 220

Query: 159 LSDDVIESIIDKV 171
               V +++    
Sbjct: 221 -KKSVQDALFRYA 232

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score = 51.7 bits (124), Expect = 7e-09
 Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 28/145 (19%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLALFKTNKKESLFAD----------RVFD 92
            +  +    +++     D   DG I++E+++L   +  K   L A+          RV D
Sbjct: 12  HLRKMKTRMQRV-----DVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVAD 66

Query: 93  LFDTKHNGILDFEEFARALSIFHPNSPIDDKI------EFSFQLYDLKQQGFIERQEVKQ 146
                    +  EE A   +        ++K          +   D  + G++   E K 
Sbjct: 67  QLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKA 126

Query: 147 MVVATLTESGMNLSDDVIESIIDKV 171
                L   G +L+DD   +  + +
Sbjct: 127 F----LQAVGPDLTDDKAITCFNTL 147

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score = 40.1 bits (94), Expect = 9e-05
 Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 11/125 (8%)

Query: 34  EALARETVFSVSEIEALYELFKKISSAV--IDDGLINKEEFQLAL--------FKTNKKE 83
             +A+    S  + E   + F +++  +       I+ EE  +           +     
Sbjct: 41  VRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMA 100

Query: 84  SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQE 143
            + +  ++D  DT  +G +   EF   L    P+   DDK    F   D  + G I R E
Sbjct: 101 VIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLT-DDKAITCFNTLDFNKNGQISRDE 159

Query: 144 VKQMV 148
               V
Sbjct: 160 FLVTV 164

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191

 Score = 50.0 bits (120), Expect = 3e-08
 Identities = 21/141 (14%), Positives = 53/141 (37%), Gaps = 27/141 (19%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLALFKTNKKESLFA------------DRV 90
           E + L ++F+++     D   DG ++++E      K  + +                D +
Sbjct: 38  ETKELTQIFRQL-----DNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHI 92

Query: 91  FDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
               D   NG +++ EF   + +        +++  +FQ +D    G I  +E+ ++   
Sbjct: 93  LQSVDFDRNGYIEYSEFV-TVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLF-- 149

Query: 151 TLTESGMNLSDDVIESIIDKV 171
                   + D+    ++ + 
Sbjct: 150 ----GVTEVDDETWHQVLQEC 166

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 48.2 bits (115), Expect = 1e-07
 Identities = 15/108 (13%), Positives = 34/108 (31%), Gaps = 9/108 (8%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL------FADRVFDLFDTKHNG 100
           +++L  ++    +AV     I++  F  ++ +  K               F   DT  + 
Sbjct: 50  MDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDN 109

Query: 101 ILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
            +  +E+     +   +         SF   D    G +  +E     
Sbjct: 110 NISRDEYGIFFGMLGLD---KTMAPASFDAIDTNNDGLLSLEEFVIAG 154

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 20/145 (13%), Positives = 42/145 (28%), Gaps = 30/145 (20%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLALFKTNKKESLFADRVFDLF-------- 94
            ++ +   F +I     D   DG I + +F+    +  K+  + A+    L         
Sbjct: 4   WVQKMKTYFNRI-----DFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWD 58

Query: 95  ----DTKHNGILDFEEF----ARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 146
                      +D   F       +      S ++  +   F+  D  +   I R E   
Sbjct: 59  NFLTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGI 118

Query: 147 MVVATLTESGMNLSDDVIESIIDKV 171
                     + L   +  +  D +
Sbjct: 119 FFGM------LGLDKTMAPASFDAI 137

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 37.4 bits (87), Expect = 8e-04
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 9/75 (12%)

Query: 48  EALYELFKKISSAVID---DGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDF 104
             L   F+      +D   D  I+++E+ +        +++ A   FD  DT ++G+L  
Sbjct: 94  GPLPLFFR-----AVDTNEDNNISRDEYGIFFGMLGLDKTM-APASFDAIDTNNDGLLSL 147

Query: 105 EEFARALSIFHPNSP 119
           EEF  A S F  N  
Sbjct: 148 EEFVIAGSDFFMNDG 162

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 22/136 (16%)

Query: 43  SVSEIEALYELFKKISSAVID---DGLINKEEFQLAL----FKTNKKESLFADRVFDLFD 95
           S  EI  L E+F  I     D    G I  EE +  L        + E      +    D
Sbjct: 22  SEEEIAGLKEMFNMI-----DADKSGQITFEELKAGLKRVGANLKESE---ILDLMQAAD 73

Query: 96  TKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTES 155
             ++G +D++EF  A    +     +D +  +F  +D    G+I   E++Q       E 
Sbjct: 74  VDNSGTIDYKEFIAATLHLNKIER-EDHLFAAFTYFDKDGSGYITPDELQQA----CEEF 128

Query: 156 GMNLSDDVIESIIDKV 171
           G+   D  IE ++  V
Sbjct: 129 GV--EDVRIEELMRDV 142

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 49.0 bits (116), Expect = 2e-07
 Identities = 24/162 (14%), Positives = 47/162 (29%), Gaps = 23/162 (14%)

Query: 18  CCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALF 77
                              +        E     +LF +++    DD  ++  E    L 
Sbjct: 701 VLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAG---DDMEVSATELMNILN 757

Query: 78  KTNKKESLFADRVFDL---------FDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSF 128
           K   +        F +          D+   G L FEEF    +          K +  +
Sbjct: 758 KVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIK-------KWQGIY 810

Query: 129 QLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK 170
           + ++  + G I   E+          +G +L+  +   II +
Sbjct: 811 KRFETDRSGTIGSNELPG----AFEAAGFHLNQHIYSMIIRR 848

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 38.6 bits (89), Expect = 6e-04
 Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 20/115 (17%)

Query: 63  DDGLINKEEFQLALFKTNKKESLFADRVFDL---------FDTKHNGILDFEEFARALSI 113
           DD  I+ +E Q  L +   K        F L          D   NG L   EF    + 
Sbjct: 546 DDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNR 605

Query: 114 FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESII 168
                         F+ +DL + G +   E++      +  +G  L   + + I+
Sbjct: 606 IR-------NYLTIFRKFDLDKSGSMSAYEMRM----AIEAAGFKLPCQLHQVIV 649

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score = 47.4 bits (113), Expect = 2e-07
 Identities = 21/150 (14%), Positives = 43/150 (28%), Gaps = 33/150 (22%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLALFKT-----------NKKESLFADRVF 91
            I+    +F       +D   +G I  +E                    K+  +  +  F
Sbjct: 18  WIKRHKHMFD-----FLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFF 72

Query: 92  DLFDTKHNGILDFEEFARALSIF----------HPNSPIDDKIEFSFQLYDLKQQGFIER 141
                ++   + F +F                 +  + I +  +  F ++D    G I  
Sbjct: 73  RGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITL 132

Query: 142 QEVKQMVVATLTESGMNLSDDVIESIIDKV 171
            E K         SG++ S +  E+     
Sbjct: 133 DEWKAY----GKISGISPSQEDCEATFRHC 158

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 47.6 bits (113), Expect = 4e-07
 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 28/149 (18%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLALFKTNKKESL---------FADRVFDL 93
             E   + ++       D    G I  EE +  L    +K +          + D +  L
Sbjct: 101 SCEEFMKTWR-----KYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKL 155

Query: 94  FDTKHNGILDFEEFARALSI-------FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 146
           FD+ ++G L+  E AR L +       F        +   +F+LYD    G+I+  E+  
Sbjct: 156 FDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDA 215

Query: 147 MVVATLTESGMNLSDDVIESIIDKVLSLI 175
           +    L +       ++  + I      I
Sbjct: 216 L----LKDLCEKNKQELDINNISTYKKNI 240

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169

 Score = 46.4 bits (111), Expect = 5e-07
 Identities = 28/136 (20%), Positives = 63/136 (46%), Gaps = 25/136 (18%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLAL----FKTNKKESLFADRVFDL---FD 95
           + + + E F      + D    G I+ +E ++A+    F+  K+E      +  +    D
Sbjct: 26  QKQEIREAFD-----LFDTDGSGTIDAKELKVAMRALGFEPKKEE------IKKMISEID 74

Query: 96  TKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTES 155
              +G +DFEEF   ++         ++I  +F+L+D    G I  ++++++      E 
Sbjct: 75  KDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRV----AKEL 130

Query: 156 GMNLSDDVIESIIDKV 171
           G NL+++ ++ +I + 
Sbjct: 131 GENLTEEELQEMIAEA 146

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143

 Score = 45.9 bits (110), Expect = 5e-07
 Identities = 28/136 (20%), Positives = 63/136 (46%), Gaps = 25/136 (18%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLAL----FKTNKKESLFADRVFDL---FD 95
           + + + E F      + D    G I+ +E ++A+    F+  K+E      +  +    D
Sbjct: 4   QKQEIREAFD-----LFDADGTGTIDVKELKVAMRALGFEPKKEE------IKKMISEID 52

Query: 96  TKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTES 155
            +  G ++F +F   ++         ++I  +F+L+D  + G I  + +K++      E 
Sbjct: 53  KEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRV----AKEL 108

Query: 156 GMNLSDDVIESIIDKV 171
           G NL+D+ ++ +ID+ 
Sbjct: 109 GENLTDEELQEMIDEA 124

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score = 46.4 bits (111), Expect = 5e-07
 Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)

Query: 43  SVSEIEALYELFKKISSAVID---DGLINKEEFQLAL----FKTNKKESLFADRVFDLFD 95
           S  EI  L ELFK     +ID    G I  +E +  L     +  + E      + D  D
Sbjct: 5   SEEEIGGLKELFK-----MIDTDNSGTITFDELKDGLKRVGSELMESE---IKDLMDAAD 56

Query: 96  TKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTES 155
              +G +D+ EF  A    +     ++ +  +F  +D    G+I   E++Q       + 
Sbjct: 57  IDKSGTIDYGEFIAATVHLNKLER-EENLVSAFSYFDKDGSGYITLDEIQQA----CKDF 111

Query: 156 GMNLSDDVIESIIDKV 171
           G+   D  I+ +I ++
Sbjct: 112 GL--DDIHIDDMIKEI 125

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score = 45.6 bits (109), Expect = 8e-07
 Identities = 28/136 (20%), Positives = 65/136 (47%), Gaps = 25/136 (18%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLAL----FKTNKKESLFADRVFDL---FD 95
           + + +YE F      + D   DG ++  E ++A+    F+  K+E      + DL   +D
Sbjct: 21  QKQEIYEAFS-----LFDMNNDGFLDYHELKVAMKALGFELPKRE------ILDLIDEYD 69

Query: 96  TKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTES 155
           ++   ++ +++F   +          D+I+ +FQL+D    G I  + ++++      E 
Sbjct: 70  SEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRV----AKEL 125

Query: 156 GMNLSDDVIESIIDKV 171
           G  L+D+ + ++I++ 
Sbjct: 126 GETLTDEELRAMIEEF 141

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score = 46.8 bits (111), Expect = 9e-07
 Identities = 27/132 (20%), Positives = 59/132 (44%), Gaps = 16/132 (12%)

Query: 44  VSEIEALYELFKKISSAVIDDGLINKEEFQLAL----FKTNKKESLFADRVFDLFDTKHN 99
           ++E +  + LF K       DG I  +E    +        + E      + +  D   N
Sbjct: 311 IAEFKEAFSLFDKD-----GDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 362

Query: 100 GILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNL 159
           G +DF EF   ++    ++  +++I  +F+++D    G+I   E++ +    +T  G  L
Sbjct: 363 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKL 418

Query: 160 SDDVIESIIDKV 171
           +D+ ++ +I + 
Sbjct: 419 TDEEVDEMIREA 430

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 43.9 bits (104), Expect = 1e-06
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 9/73 (12%)

Query: 42  FSVSEIEALYELFKKISSAVID---DGLINKEEFQLALFKTNKKESLFADRVFDLFDTKH 98
               E+  L  +F        D    G + +EEF+    +   + +  A+ VF   D   
Sbjct: 21  GDGEELARLRSVFAAC-----DANRSGRLEREEFRALCTELRVRPAD-AEAVFQRLDADR 74

Query: 99  NGILDFEEFARAL 111
           +G + F+EFAR  
Sbjct: 75  DGAITFQEFARGF 87

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 22/136 (16%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLAL----FKTNKKESLFADRVFDLFDTKH 98
            I      F      + D    G I+ +E    +        K+E    D + +  D   
Sbjct: 18  MIAEFKAAFD-----MFDADGGGDISTKELGTVMRMLGQNPTKEE---LDAIIEEVDEDG 69

Query: 99  NGILDFEEFARALSIFHPNSPIDDKIE---FSFQLYDLKQQGFIERQEVKQMVVATLTES 155
           +G +DFEEF   +             E     F+++D    GFI+ +E+ ++    L  +
Sbjct: 70  SGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEI----LRAT 125

Query: 156 GMNLSDDVIESIIDKV 171
           G +++++ IE ++   
Sbjct: 126 GEHVTEEDIEDLMKDS 141

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 30/141 (21%)

Query: 46  EIEALYELFKKISSAVID----DGLINKEEFQLAL----FKTNKKESLFADRVFDL---F 94
           +++ L   F+       +     G ++ ++  + L     +  K        +  L   F
Sbjct: 11  QVKLLETAFR-----DFETPEGSGRVSTDQIGIILEVLGIQQTKST------IRQLIDEF 59

Query: 95  DTKHNGILDFEEFARALSIFH--PNSPIDDKIEFS--FQLYDLKQQGFIERQEVKQMVVA 150
           D   NG +DF+ F    + F     +P   + E    F+LYD +  G+I    ++++   
Sbjct: 60  DPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREI--- 116

Query: 151 TLTESGMNLSDDVIESIIDKV 171
            L E    LS + ++++ID++
Sbjct: 117 -LAELDETLSSEDLDAMIDEI 136

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 13/112 (11%)

Query: 64  DGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPID 121
           DG ++ EE +  + K    K E L    +F   D   NG +D  EFA+           D
Sbjct: 14  DGAVSYEEVKAFVSKKRAIKNEQLLQL-IFKSIDADGNGEIDQNEFAKFYGSIQGQDLSD 72

Query: 122 DKIEFS--FQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV 171
           DKI     ++L D+   G + ++EV                 + +   + K 
Sbjct: 73  DKIGLKVLYKLMDVDGDGKLTKEEVTSFF--------KKHGIEKVAEQVMKA 116

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 19/131 (14%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLAL----FKTNKKESLFADRVFDLFDTKH 98
           ++    E F+     + D    G I KE  Q  L     +         + +F+  D   
Sbjct: 4   QVSEFKEAFE-----LFDSERTGFITKEGLQTVLKQFGVRVEPAA---FNEMFNEADATG 55

Query: 99  NGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN 158
           NG + F EF   +      +  +D +  +F+ +D +  G+I +  ++      L   G  
Sbjct: 56  NGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDA----LLNLGDR 111

Query: 159 LSDDVIESIID 169
           L        + 
Sbjct: 112 LKPHEFAEFLG 122

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 93  LFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL 152
           +   K  G  D++ F     +       D +++  F++ D  Q GFIE +E+K  V+   
Sbjct: 15  ISAFKDPGTFDYKRF---FHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKG-VLKGF 70

Query: 153 TESGMNLSDDVIESIIDKV 171
           +  G +L+D   ++++   
Sbjct: 71  SAHGRDLNDTETKALLAAG 89

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 41.8 bits (99), Expect = 4e-06
 Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 88  DRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQM 147
           + +F   D   +G + +EE    +S        +  ++  F+  D    G I++ E  + 
Sbjct: 3   EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKN-EQLLQLIFKSIDADGNGEIDQNEFAKF 61

Query: 148 VVA 150
             +
Sbjct: 62  YGS 64

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 38.3 bits (90), Expect = 7e-05
 Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 64  DGLINKEEFQLALFKTNKKES-LFADRVFDLFDTKHNGILDFEEFARALS 112
           DG ++ EE +  + K    ++      +F   D   NG +D  EFA+   
Sbjct: 14  DGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110

 Score = 42.6 bits (101), Expect = 6e-06
 Identities = 14/73 (19%), Positives = 33/73 (45%), Gaps = 4/73 (5%)

Query: 99  NGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN 158
            G  + ++F    ++    +   + ++  F+  D    GFIE +E+K  V+ +    G +
Sbjct: 22  EGSFNHKKF---FALVGLKAMSANDVKKVFKAIDADASGFIEEEELKF-VLKSFAADGRD 77

Query: 159 LSDDVIESIIDKV 171
           L+D   ++ +   
Sbjct: 78  LTDAETKAFLKAA 90

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 43.6 bits (103), Expect = 6e-06
 Identities = 21/150 (14%), Positives = 38/150 (25%), Gaps = 33/150 (22%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLALFKT-----------NKKESLFADRVF 91
            I     +F       +D   +G I+ +E                    K+     +  F
Sbjct: 14  WIGRHKHMFN-----FLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFF 68

Query: 92  DLFDTKHNGILDFEEFARALSIF----------HPNSPIDDKIEFSFQLYDLKQQGFIER 141
                K+    D+  +                 +  + I    +  F + D  Q G I  
Sbjct: 69  GGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITL 128

Query: 142 QEVKQMVVATLTESGMNLSDDVIESIIDKV 171
            E K         +G+  S +  E      
Sbjct: 129 DEWKAY----TKAAGIIQSSEDCEETFRVC 154

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 43.7 bits (103), Expect = 6e-06
 Identities = 20/149 (13%), Positives = 42/149 (28%), Gaps = 34/149 (22%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLALFKTNKKESLF----------ADRVFD 92
            +  LY+ F        D   DG +  +E      +  +  +                F 
Sbjct: 34  MLSRLYKRFDTF-----DLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFL 88

Query: 93  LFDTKHNGILDFEEFARALSIFHPN----------SPIDDKIEFSFQLYDLKQQGFIERQ 142
               +    L  E++  A  +F             S I       + + D    G ++  
Sbjct: 89  HKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVD 148

Query: 143 EVKQMVVATLTESGMNLSDDVIESIIDKV 171
           E+K M+         ++  +   +  +K 
Sbjct: 149 ELKTMM------KAFDVPQEAAYTFFEKA 171

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A Length = 261

 Score = 43.9 bits (103), Expect = 6e-06
 Identities = 13/126 (10%), Positives = 43/126 (34%), Gaps = 15/126 (11%)

Query: 35  ALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQL--ALFKTNKKE--------- 83
            L +     +  + A  +   + +    D  +   +       ++   ++E         
Sbjct: 69  RLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPL 128

Query: 84  --SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIER 141
              +  + + +++DT   G +    F   +      + ++DK  + F+       GF ++
Sbjct: 129 CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISL-CKAHLEDKYRYLFKQVASS-TGFCDQ 186

Query: 142 QEVKQM 147
           + +  +
Sbjct: 187 RRLGLL 192

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 43.4 bits (102), Expect = 8e-06
 Identities = 15/95 (15%), Positives = 29/95 (30%), Gaps = 13/95 (13%)

Query: 64  DGLINKEEFQLALFKTNKKES----------LFADRVFDLFDTKHNGILDFEEFARALSI 113
           D +++ EE+     KT                    +F   D   +GI+D EEF      
Sbjct: 74  DDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKN 133

Query: 114 FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
           F         +   + +     +   +    K++ 
Sbjct: 134 FQLQ---CADVPAVYNVITDGGKVTFDLNRYKELY 165

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 37.6 bits (87), Expect = 8e-04
 Identities = 14/132 (10%), Positives = 38/132 (28%), Gaps = 30/132 (22%)

Query: 64  DGLINKEEFQLALFKTNKKESL----------------FADRVFDLFDTKHNGILDFEEF 107
           DG I   +F+  + +  +                        +    D   + ++ +EE+
Sbjct: 23  DGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEY 82

Query: 108 ARALSIFHPNSP--------IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNL 159
                                 ++I F F+  D+   G ++ +E +             L
Sbjct: 83  LAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYC------KNFQL 136

Query: 160 SDDVIESIIDKV 171
               + ++ + +
Sbjct: 137 QCADVPAVYNVI 148

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 27/133 (20%), Positives = 57/133 (42%), Gaps = 19/133 (14%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLAL----FKTNKKESLFADRVFDLFDTKH 98
           +I    E F      + D   DG I  +E    +        + E      + +  D   
Sbjct: 9   QIAEFKEAFS-----LFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADG 60

Query: 99  NGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN 158
           NG +DF EF   ++    ++  +++I  +F+++D    G+I   E++ +    +T  G  
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEK 116

Query: 159 LSDDVIESIIDKV 171
           L+D+ ++ +I + 
Sbjct: 117 LTDEEVDEMIREA 129

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 43.5 bits (102), Expect = 9e-06
 Identities = 27/150 (18%), Positives = 57/150 (38%), Gaps = 22/150 (14%)

Query: 46  EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL---------FADRVFDLFDT 96
                 ++++K  +     G I+  E +  L     +            + D +  +FD 
Sbjct: 102 NSVEFMKIWRKYDAD--SSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDK 159

Query: 97  KHNGILDFEEFARALSI---------FHPNSPIDDKIEFS--FQLYDLKQQGFIERQEVK 145
             +G LD  + AR L++            +S ++ K +F   F  YD+ + G +E  EV 
Sbjct: 160 NKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVD 219

Query: 146 QMVVATLTESGMNLSDDVIESIIDKVLSLI 175
             V   +     ++S   ++   + +L+  
Sbjct: 220 GFVKDMMELVRPSISGGDLDKFRECLLTHC 249

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 41.2 bits (96), Expect = 6e-05
 Identities = 29/158 (18%), Positives = 62/158 (39%), Gaps = 23/158 (14%)

Query: 39  ETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL----FKTNKKESLFADRV---- 90
           ++ F+  +     ++++   +   D+G I  +E          K   K+ +  +RV    
Sbjct: 2   DSAFANLDAAGFLQIWQHFDAD--DNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIK 59

Query: 91  ---FDLFDTKHNGILDFEEFARA--------LSIFHPNSPIDDKIEFS--FQLYDLKQQG 137
                 +D   +G L  EE A          L IF   +P+D+ +EF   ++ YD    G
Sbjct: 60  KSFMSAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSG 119

Query: 138 FIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLI 175
           +I   E+K  +     +    +  + ++   D ++ + 
Sbjct: 120 YISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIF 157

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 6/77 (7%)

Query: 95  DTKHNGILDFEEFARALSIFHPNSPIDDKIEF--SFQLYDLKQQGFIERQEVKQMVVATL 152
           D   +  +DFE F   L     N       ++   F+++D +  G +   E++ +    L
Sbjct: 58  DELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHV----L 113

Query: 153 TESGMNLSDDVIESIID 169
           T  G  ++++ +E+++ 
Sbjct: 114 TTLGEKMTEEEVETVLA 130

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 42.5 bits (100), Expect = 1e-05
 Identities = 16/119 (13%), Positives = 37/119 (31%), Gaps = 19/119 (15%)

Query: 46  EIEALYELFKKISSAVID------DGLINKEEFQLALFKTNKKES----------LFADR 89
           +        K I   +        D  + KEE+     +  K              + + 
Sbjct: 54  KHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNF 113

Query: 90  VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
           +FD+ DT  + I+D  E++     +          + +F       +  + R+   ++ 
Sbjct: 114 MFDVNDTSGDNIIDKHEYSTVYMSYGIP---KSDCDAAFDTLSDGGKTMVTREIFARLW 169

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 37.9 bits (88), Expect = 5e-04
 Identities = 18/132 (13%), Positives = 42/132 (31%), Gaps = 30/132 (22%)

Query: 64  DGLINKEEFQLALFKTNKKESL----------------FADRVFDLFDTKHNGILDFEEF 107
           DG+I  ++F+LA+ K     S                   D +    D   +  +  EE+
Sbjct: 27  DGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEW 86

Query: 108 ARALS--IFHPNSP------IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNL 159
            +  +  +            +   + F F + D      I++ E   + ++        +
Sbjct: 87  LKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMS------YGI 140

Query: 160 SDDVIESIIDKV 171
                ++  D +
Sbjct: 141 PKSDCDAAFDTL 152

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 95  DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE 154
           D   N  ++F EF   +S     +  + ++  +F+++D    G I   E+K +    LT 
Sbjct: 57  DVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHV----LTS 112

Query: 155 SGMNLSDDVIESIIDKV 171
            G  L+D  ++ ++ +V
Sbjct: 113 IGEKLTDAEVDEMLREV 129

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105

 Score = 40.9 bits (96), Expect = 2e-05
 Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 11/102 (10%)

Query: 27  PRGLEDPEALARETVFSVSEIEALYELFKKISSAVID---DGLINKEEFQLALFKTNKK- 82
                D + LAR      S   A+ + F+       D      I++EEF+    +  +  
Sbjct: 3   HMATADRDILARLHKAVTSHYHAITQEFE-----NFDTMKTNTISREEFRAICNRRVQIL 57

Query: 83  -ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDK 123
            +  F DR+++       G L + +F    S     +P+   
Sbjct: 58  TDEQF-DRLWNEMPVNAKGRLKYPDFLSRFSSETAATPMATG 98

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 7/80 (8%)

Query: 95  DTKHNGILDFEEFARALSIFHPNSPIDDKIEF---SFQLYDLKQQGFIERQEVKQMVVAT 151
           D   +G +DF+EF   +     +       E     F+++D    G+I+ +E+K M    
Sbjct: 65  DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIM---- 120

Query: 152 LTESGMNLSDDVIESIIDKV 171
           L  +G  +++D IE ++   
Sbjct: 121 LQATGETITEDDIEELMKDG 140

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174

 Score = 41.8 bits (98), Expect = 2e-05
 Identities = 22/130 (16%), Positives = 43/130 (33%), Gaps = 18/130 (13%)

Query: 48  EALYELFKKISSAVIDDGLINKEEFQLAL---FKTNKKESLFADR----VFDLFDTKHNG 100
              +     +         I+  + Q  L     T     +F+      +  L + K NG
Sbjct: 5   HHHHHHSSGLVP---RGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNG 61

Query: 101 ILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLS 160
            LD EEFAR               +  FQ       G +   ++ + +  T    G+ +S
Sbjct: 62  RLDQEEFARLWKRLV-------HYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFIS 113

Query: 161 DDVIESIIDK 170
            +++  +  +
Sbjct: 114 RELLHLVTLR 123

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 30/137 (21%), Positives = 49/137 (35%), Gaps = 22/137 (16%)

Query: 46  EIEALYELFKKISSAVID---DGLINKEEFQLAL----FKTNKKESLFADRVFDLFDTKH 98
           EIE L E F+       D   DG IN  +    +    +   + E      +    +   
Sbjct: 9   EIEELREAFR-----EFDKDKDGYINCRDLGNCMRTMGYMPTEME---LIELSQQINMNL 60

Query: 99  NGILDFEEFARALSIFHPNSPIDDKIEF----SFQLYDLKQQGFIERQEVKQMVVATLTE 154
            G +DF++F   +         D         +F+ +D    G I   E+++ + A L  
Sbjct: 61  GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALL-- 118

Query: 155 SGMNLSDDVIESIIDKV 171
            G  +    IE II  V
Sbjct: 119 -GHQVGHRDIEEIIRDV 134

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 4/77 (5%)

Query: 95  DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE 154
           D   NG +DF EF   ++        ++++  +F+++D    G I   E++ +    +T 
Sbjct: 56  DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHV----MTN 111

Query: 155 SGMNLSDDVIESIIDKV 171
            G  L+DD ++ +I + 
Sbjct: 112 LGEKLTDDEVDEMIREA 128

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 6/79 (7%)

Query: 95  DTKHNGILDFEEFARALSIFHPNSPIDDKIEF--SFQLYDLKQQGFIERQEVKQMVVATL 152
           ++     +D E+F + L+  +      D  EF   FQ++D    G I   E++ +    L
Sbjct: 47  ESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYV----L 102

Query: 153 TESGMNLSDDVIESIIDKV 171
           T  G  LS++ ++ ++  V
Sbjct: 103 TSLGEKLSNEEMDELLKGV 121

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 4e-05
 Identities = 18/125 (14%), Positives = 39/125 (31%), Gaps = 28/125 (22%)

Query: 45  SEIEALYELFK------KISSAVI----------DDGLINKEEFQLALFKTNKKESLFAD 88
           +E   +++          I + ++          D  ++  +  + +L +   KES    
Sbjct: 369 AEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI-- 426

Query: 89  RVFDL-FDTK---------HNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGF 138
            +  +  + K         H  I+D     +         P  D+  +S   + LK    
Sbjct: 427 SIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH 486

Query: 139 IERQE 143
            ER  
Sbjct: 487 PERMT 491

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156

 Score = 40.6 bits (96), Expect = 5e-05
 Identities = 24/137 (17%), Positives = 52/137 (37%), Gaps = 23/137 (16%)

Query: 42  FSVSEIEALYELFKKISSAVID---DGLINKEEFQLAL----FKTNKKESLFADRVFDLF 94
               +I+ + E F      +ID   DG ++KE+ +          + KE      +  + 
Sbjct: 12  LPQKQIQEMKEAFS-----MIDVDRDGFVSKEDIKAISEQLGRAPDDKE------LTAML 60

Query: 95  DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE 154
             +  G L+F  F    S     +  ++ I  +F ++D ++   +  + +K +    L  
Sbjct: 61  K-EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDL----LEN 115

Query: 155 SGMNLSDDVIESIIDKV 171
            G N + D +     + 
Sbjct: 116 MGDNFNKDEMRMTFKEA 132

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 4/73 (5%)

Query: 99  NGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN 158
               +++ F    +     +   D I+ +F + D  + GFIE  E+K   +   +     
Sbjct: 22  ADSFNYKAF---FAKVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKL-FLQVFSAGARA 77

Query: 159 LSDDVIESIIDKV 171
           L+D   ++ +   
Sbjct: 78  LTDAETKAFLKAG 90

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111

 Score = 39.4 bits (92), Expect = 8e-05
 Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 43  SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL 102
             S      +LF          G +   + +  L +++  ++  A  +++L D   +G L
Sbjct: 9   PQSSRLKYRQLFNSHDKT--MSGHLTGPQARTILMQSSLPQAQLAS-IWNLSDIDQDGKL 65

Query: 103 DFEEFARAL 111
             EEF  A+
Sbjct: 66  TAEEFILAM 74

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 40.1 bits (94), Expect = 8e-05
 Identities = 18/119 (15%), Positives = 40/119 (33%), Gaps = 18/119 (15%)

Query: 45  SEIEALYELFKKISSAVID------DGLINKEEFQLALFKTNKKES---------LFADR 89
           +E++ L   F  +   +        DG + +E+F         ++               
Sbjct: 47  AEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKG 106

Query: 90  VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
           +  + D   +G ++ +EFA  L+    +     +   +F   D    G +   E+   V
Sbjct: 107 IVGMCDKNADGQINADEFAAWLTALGMS---KAEAAEAFNQVDTNGNGELSLDELLTAV 162

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 38.2 bits (89), Expect = 4e-04
 Identities = 15/131 (11%), Positives = 33/131 (25%), Gaps = 29/131 (22%)

Query: 64  DGLINKEEFQLALFK----------------TNKKESLFADRVFDLFDTKHNGILDFEEF 107
           +G + + +F+                              D +        +G L  E+F
Sbjct: 21  NGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQF 80

Query: 108 ARALSIF-------HPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLS 160
            R              N  +   ++    + D    G I   E    +      + + +S
Sbjct: 81  IRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWL------TALGMS 134

Query: 161 DDVIESIIDKV 171
                   ++V
Sbjct: 135 KAEAAEAFNQV 145

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78

 Score = 38.5 bits (90), Expect = 8e-05
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 45  SEIEALYELFKKISSAVIDDGLINKEEFQLAL---FKTNKKESLFADRVFDLFDTKHNGI 101
                L  +F+K ++   D   ++KEE +  +   F +  K     D +F   D   +G 
Sbjct: 4   KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGE 63

Query: 102 LDFEEFARALS 112
           + FEEF   + 
Sbjct: 64  VSFEEFQVLVK 74

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Length = 96

 Score = 39.0 bits (91), Expect = 8e-05
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 9/71 (12%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
           +E +   F K +    D G + KE+       +   F  N+K+ L  D++    D   +G
Sbjct: 8   METMMFTFHKFAG---DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDG 64

Query: 101 ILDFEEFARAL 111
            + F+ F   +
Sbjct: 65  KVGFQSFFSLI 75

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714

 Score = 41.3 bits (96), Expect = 8e-05
 Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 20/148 (13%)

Query: 32  DPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF 91
           D E  A       +E +      +  +    +D  I+  E Q  L +   K        F
Sbjct: 513 DDEIEANIEEIEANEEDIGDGFRRLFAQLAGEDAEISAFELQTILRRVLAKREDIKSDGF 572

Query: 92  DL---------FDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQ 142
            +          D   +G L  +EF    +          K +  ++  D+ + G +   
Sbjct: 573 SIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQ-------KYQKIYREIDVDRSGTMNSY 625

Query: 143 EVKQMVVATLTESGMNLSDDVIESIIDK 170
           E+++     L E+G  L   + + I+ +
Sbjct: 626 EMRK----ALEEAGFKLPCQLHQVIVAR 649

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 95  DTKHNGILDFEEFARALSIFHPNSPIDDKIEF--SFQLYDLKQQGFIERQEVKQMVVATL 152
                  L FEEF  A      +       ++  +F+ +D + QGFI   E++ +    L
Sbjct: 56  HKMGEKSLPFEEFLPAYEGLM-DCEQGTFADYMEAFKTFDREGQGFISGAELRHV----L 110

Query: 153 TESGMNLSDDVIESIIDKV 171
           T  G  LSD+ ++ II   
Sbjct: 111 TALGERLSDEDVDEIIKLT 129

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} Length = 99

 Score = 38.7 bits (90), Expect = 1e-04
 Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 6/71 (8%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
           ++AL  +F   S +  D   ++K E       +L  F  ++K+ +  +++ +  D+  + 
Sbjct: 9   MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDN 68

Query: 101 ILDFEEFARAL 111
            +DF EF   +
Sbjct: 69  EVDFNEFVVLV 79

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113

 Score = 38.8 bits (90), Expect = 1e-04
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
           ++ +   F K S    D   +NK E       +L  F   + +     ++    D+  + 
Sbjct: 21  LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDN 80

Query: 101 ILDFEEFARAL 111
            +DF+E+   L
Sbjct: 81  EVDFQEYCVFL 91

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 43  SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL 102
           S +E     E+F K       DG ++  E +    KT    +L A  ++ L DTK  G L
Sbjct: 5   SPAEKAKYDEIFLKTDKD--MDGFVSGLEVREIFLKTGLPSTLLA-HIWSLCDTKDCGKL 61

Query: 103 DFEEFARAL 111
             ++FA A 
Sbjct: 62  SKDQFALAF 70

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 11/93 (11%)

Query: 64  DGLINKEEFQLALFKTNKKES--------LFADRVFDLFDTKHNGILDFEEFARALSIFH 115
           D  I +EEF     K  + +          F      + DT  +G +   + ARAL+ F 
Sbjct: 69  DQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG 128

Query: 116 PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
                +D    +    D    G +   E+    
Sbjct: 129 VP---EDLARQAAAALDTDGDGKVGETEIVPAF 158

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 12/82 (14%), Positives = 31/82 (37%), Gaps = 9/82 (10%)

Query: 95  DTKHNGILDFEEFARALSIFH-----PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV 149
             +    L  ++    + +             +    +FQ++D +  G +   +++ M  
Sbjct: 51  SLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYM-- 108

Query: 150 ATLTESGMNLSDDVIESIIDKV 171
             LT  G  L+D  ++ ++  V
Sbjct: 109 --LTGLGEKLTDAEVDELLKGV 128

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
           ++ +   F K S    D   +NK E       +L  F   + +     ++    D+  + 
Sbjct: 9   LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDN 68

Query: 101 ILDFEEFARAL 111
            +DF+E+   L
Sbjct: 69  EVDFQEYCVFL 79

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A Length = 95

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
           +E +  +F + S        ++K E       +LA    N K+    D +F   D   + 
Sbjct: 11  LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDE 70

Query: 101 ILDFEEF 107
            +DF+EF
Sbjct: 71  QVDFQEF 77

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 4/73 (5%)

Query: 99  NGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN 158
                 +EF    +     S   D ++ +F + D  + GFIE  E+K   +   + S   
Sbjct: 21  ADSFKHKEF---FAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKL-FLQNFSPSARA 76

Query: 159 LSDDVIESIIDKV 171
           L+D   ++ +   
Sbjct: 77  LTDAETKAFLADG 89

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A Length = 101

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 6/71 (8%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
           + A+   F++ +    D   + + E       +LA +   +      ++   + DT  + 
Sbjct: 9   VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDC 68

Query: 101 ILDFEEFARAL 111
            +DF E+ R+L
Sbjct: 69  EVDFVEYVRSL 79

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 11/65 (16%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 45  SEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGIL 102
             + ++ +++ K S    +   + +++ +  L            AD  F   D   +G +
Sbjct: 7   KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAV 66

Query: 103 DFEEF 107
           +F+EF
Sbjct: 67  NFQEF 71

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 99  NGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN 158
               +++ F    S    +S   D+I+  F + D  + GFIE +E++   +   + S   
Sbjct: 22  ADSFNYKSF---FSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQL-FLKNFSSSARV 77

Query: 159 LSDDVIESIIDKV 171
           L+    ++ +   
Sbjct: 78  LTSAETKAFLAAG 90

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* Length = 113

 Score = 38.0 bits (88), Expect = 2e-04
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 7/68 (10%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEFQLAL-------FKTNKKESLFADRVFDLFDTKHN 99
           IE +   F + S  +     +N+ EF+  +        K   K     + + +  DT  +
Sbjct: 11  IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNAD 70

Query: 100 GILDFEEF 107
             L FEEF
Sbjct: 71  KQLSFEEF 78

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A Length = 93

 Score = 37.5 bits (87), Expect = 2e-04
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 6/71 (8%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
           +E L  +F   S    D   ++K+E       +L+ F   +K++   D++    D   +G
Sbjct: 8   METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDG 67

Query: 101 ILDFEEFARAL 111
            +DF+EF   +
Sbjct: 68  EVDFQEFVVLV 78

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Length = 104

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
           ++ +   F K S    D   +NK E       +L  +   + +     ++    D+  + 
Sbjct: 12  LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDN 71

Query: 101 ILDFEEFARAL 111
            +DF+E+   L
Sbjct: 72  EVDFQEYCVFL 82

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92

 Score = 37.4 bits (87), Expect = 3e-04
 Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 43  SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL 102
           +  + +     FK I   +  +G I     +    K+       +  +++L D   +G L
Sbjct: 4   TDEQRQYYVNQFKTIQPDL--NGFIPGSAAKEFFTKSKLPILELS-HIWELSDFDKDGAL 60

Query: 103 DFEEFARAL 111
             +EF  A 
Sbjct: 61  TLDEFCAAF 69

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A Length = 99

 Score = 37.5 bits (87), Expect = 3e-04
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 6/67 (8%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEFQ------LALFKTNKKESLFADRVFDLFDTKHNG 100
           IE+L  +F+K +    ++  I+K EF       LA F  N+K+    DR+    D   +G
Sbjct: 12  IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDG 71

Query: 101 ILDFEEF 107
            LDF+EF
Sbjct: 72  QLDFQEF 78

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A Length = 95

 Score = 37.1 bits (86), Expect = 3e-04
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
           +  + ++F + S +      + K E       +L  F  + K+    D++    D   + 
Sbjct: 8   MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDA 67

Query: 101 ILDFEEFARAL 111
            +DF EF   +
Sbjct: 68  QVDFSEFIVFV 78

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 6/77 (7%)

Query: 95  DTKHNGILDFEEFARALSIFHPNSPIDDKIEF--SFQLYDLKQQGFIERQEVKQMVVATL 152
           +  +   + FEEF   L     N       +F    +++D +  G +   E++ +    L
Sbjct: 56  EEMNAAAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHV----L 111

Query: 153 TESGMNLSDDVIESIID 169
              G  ++++ +E ++ 
Sbjct: 112 ATLGEKMTEEEVEELMK 128

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Length = 92

 Score = 37.0 bits (86), Expect = 4e-04
 Identities = 9/64 (14%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEFQLAL---FKTNKKESLFADRVFDLFDTKHNGILD 103
           +  +   F K S        ++++E +  +       + +    D +    D   +  +D
Sbjct: 9   LTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEID 68

Query: 104 FEEF 107
           F+E+
Sbjct: 69  FKEY 72

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... Length = 92

 Score = 36.7 bits (85), Expect = 4e-04
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
           + AL ++F + S    D   + K E       +L+ F    KE    D+V +  D+  +G
Sbjct: 8   VVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDG 67

Query: 101 ILDFEEFARAL 111
             DF+EF   +
Sbjct: 68  ECDFQEFMAFV 78

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121

 Score = 37.5 bits (87), Expect = 5e-04
 Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 43  SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL 102
           +V E     + F  +       G I  ++ +   F++   + + A +++ L D  ++G +
Sbjct: 28  TVEERAKHDQQFHSLKP---ISGFITGDQARNFFFQSGLPQPVLA-QIWALADMNNDGRM 83

Query: 103 DFEEFARAL 111
           D  EF+ A+
Sbjct: 84  DQVEFSIAM 92

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94

 Score = 36.9 bits (86), Expect = 5e-04
 Identities = 14/74 (18%), Positives = 32/74 (43%), Gaps = 5/74 (6%)

Query: 98  HNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGM 157
           H+      E     S+       ++  E +F++ D    G+I   E++ +    +T  G 
Sbjct: 6   HHHHGSSGENLYFQSLMKDTDSEEEIRE-AFRVEDKDGNGYISAAELRHV----MTNLGE 60

Query: 158 NLSDDVIESIIDKV 171
            L+D+ ++ +I + 
Sbjct: 61  KLTDEEVDEMIREA 74

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166

 Score = 37.6 bits (88), Expect = 6e-04
 Identities = 16/114 (14%), Positives = 39/114 (34%), Gaps = 37/114 (32%)

Query: 91  FDLFDTKHNGILDFEEFA---RALSIFHPNSPI--------DDKIEFS------------ 127
           F + D   +GI+D ++      A+   +  +             I F+            
Sbjct: 31  FTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFTVFLTMFGEKLKG 90

Query: 128 ----------FQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV 171
                     F++ D   +G I++  ++++    LT  G   + + I+++    
Sbjct: 91  ADPEDVIMGAFKVLDPDGKGSIKKSFLEEL----LTTGGGRFTPEEIKNMWAAF 140

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110

 Score = 36.7 bits (85), Expect = 6e-04
 Identities = 11/69 (15%), Positives = 23/69 (33%), Gaps = 3/69 (4%)

Query: 43  SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL 102
           +  + E     F+ +         I+    +    K+       +  +++L D   +G L
Sbjct: 17  TEEQREYYVNQFRSLQPD--PSSFISGSVAKNFFTKSKLSIPELS-YIWELSDADCDGAL 73

Query: 103 DFEEFARAL 111
              EF  A 
Sbjct: 74  TLPEFCAAF 82

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A Length = 90

 Score = 36.3 bits (84), Expect = 7e-04
 Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 8/71 (11%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
           I  L  +F K S    D   ++K+E       +L +    +   +   R+ +  D   + 
Sbjct: 9   IGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEI--ARLMEDLDRNKDQ 66

Query: 101 ILDFEEFARAL 111
            ++F+E+   L
Sbjct: 67  EVNFQEYVTFL 77

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	178
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	99.95
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	99.9
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	99.87
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	99.87
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	99.85
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.84
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.83
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	99.83
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.82
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	99.82
3fwb_A	161	Cell division control protein 31; gene gating, com	99.82
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.81
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.81
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	99.81
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.81
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.81
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.81
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	99.81
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	99.8
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	99.8
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.8
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.79
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.79
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	99.79
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	99.79
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	99.79
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	99.78
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.78
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	99.77
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	99.77
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	99.77
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	99.76
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	99.76
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	99.76
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	99.76
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	99.75
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.75
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	99.75
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	99.74
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	99.74
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	99.74
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	99.73
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	99.73
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	99.73
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	99.72
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	99.72
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.72
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	99.71
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.71
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	99.7
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	99.7
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	99.7
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	99.7
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.69
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	99.69
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	99.69
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	99.68
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	99.68
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	99.68
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	99.68
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	99.68
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	99.67
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	99.67
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	99.67
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	99.67
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	99.67
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	99.67
1y1x_A	191	Leishmania major homolog of programmed cell death	99.67
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	99.67
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	99.66
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	99.65
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	99.65
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	99.64
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	99.64
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	99.64
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	99.62
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	99.62
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	99.62
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.62
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	99.61
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.6
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.6
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.59
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.59
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	99.59
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.58
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	99.58
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	99.57
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	99.57
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	99.57
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	99.57
3fwb_A	161	Cell division control protein 31; gene gating, com	99.56
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	99.56
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	99.55
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	99.55
1y1x_A	191	Leishmania major homolog of programmed cell death	99.55
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.54
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.54
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	99.54
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.54
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.54
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	99.54
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.54
2hps_A	186	Coelenterazine-binding protein with bound coelent;	99.54
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	99.53
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	99.53
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	99.53
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	99.53
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	99.52
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.52
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	99.52
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	99.52
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.52
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.51
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	99.51
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	99.51
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	99.51
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	99.51
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	99.51
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	99.51
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	99.5
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.5
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	99.5
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	99.5
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	99.5
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	99.49
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	99.49
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.49
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.48
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	99.48
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	99.48
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	99.48
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	99.47
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	99.47
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	99.47
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.45
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	99.45
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	99.45
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	99.45
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	99.45
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	99.44
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	99.44
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	99.44
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	99.43
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	99.43
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	99.43
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.42
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	99.41
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	99.41
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	99.41
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	99.4
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	99.4
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.4
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	99.4
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	99.4
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	99.39
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.39
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	99.38
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	99.38
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	99.38
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	99.38
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.38
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	99.38
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	99.37
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	99.37
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	99.37
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	99.36
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	99.36
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	99.36
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	99.35
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.35
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.35
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	99.34
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	99.34
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	99.33
1tuz_A	118	Diacylglycerol kinase alpha; transferase, HR532, n	99.32
2hps_A	186	Coelenterazine-binding protein with bound coelent;	99.32
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	99.32
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	99.31
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	99.3
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	99.3
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	99.29
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	99.26
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	99.25
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	99.24
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	99.24
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	99.23
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	99.23
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	99.22
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.2
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	99.2
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	99.19
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	99.19
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	99.18
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	99.17
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	99.17
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	99.17
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	99.17
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	99.15
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	99.14
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	99.13
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	99.13
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	99.11
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	99.1
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	99.09
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	99.09
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	99.08
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	99.08
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	99.05
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	99.05
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	99.04
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	99.04
3li6_A	66	Calcium-binding protein; calcium signaling protein	99.03
1c07_A	95	Protein (epidermal growth factor receptor pathway	99.02
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	99.02
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	99.02
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	99.02
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	99.01
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	99.01
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	99.0
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	99.0
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	99.0
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	99.0
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	98.99
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	98.99
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	98.98
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	98.98
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	98.98
1c07_A	95	Protein (epidermal growth factor receptor pathway	98.97
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	98.97
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	98.96
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	98.96
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	98.95
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	98.95
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	98.94
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	98.94
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	98.94
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	98.92
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	98.92
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	98.91
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	98.91
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	98.91
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	98.9
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	98.9
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	98.89
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	98.89
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	98.89
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	98.89
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	98.89
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	98.88
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	98.88
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	98.87
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	98.86
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	98.85
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	98.85
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	98.85
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	98.84
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	98.84
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	98.83
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	98.83
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	98.83
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	98.83
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	98.83
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	98.82
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	98.82
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	98.82
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	98.81
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	98.81
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	98.81
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	98.8
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	98.8
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	98.79
3li6_A	66	Calcium-binding protein; calcium signaling protein	98.79
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	98.78
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	98.78
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	98.77
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	98.77
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	98.77
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	98.77
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	98.77
2jq6_A	139	EH domain-containing protein 1; metal binding prot	98.77
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	98.76
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	98.76
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	98.75
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	98.75
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	98.74
2jq6_A	139	EH domain-containing protein 1; metal binding prot	98.74
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	98.73
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	98.73
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	98.73
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	98.73
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	98.72
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	98.69
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	98.67
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	98.67
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	98.66
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	98.64
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	98.64
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	98.63
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	98.62
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	98.58
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	98.56
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	98.49
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	98.47
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	98.46
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	98.44
1sra_A	151	Sparc; extracellular matrix protein, calcium-bindi	98.35
1tuz_A	118	Diacylglycerol kinase alpha; transferase, HR532, n	98.29
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	98.19
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	98.17
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	98.13
1h8b_A	75	ACT-EF34, alpha-actinin 2, skeletal muscle isoform	98.08
1h8b_A	75	ACT-EF34, alpha-actinin 2, skeletal muscle isoform	97.99
1sra_A	151	Sparc; extracellular matrix protein, calcium-bindi	97.82
1nub_A	229	Basement membrane protein BM-40; extracellular mod	97.52
1nub_A	229	Basement membrane protein BM-40; extracellular mod	97.21
2qpt_A	550	EH domain-containing protein-2; protein-nucleotide	96.1
1pul_A	125	Hypothetical protein C32E8.3 in chromosome I; alph	95.44
2qpt_A	550	EH domain-containing protein-2; protein-nucleotide	94.79
1pul_A	125	Hypothetical protein C32E8.3 in chromosome I; alph	94.36
2l5y_A	150	Stromal interaction molecule 2; EF-hand, SAM domai	94.05
2kav_A	129	Sodium channel protein type 2 subunit alpha; volta	93.35
1wlm_A	151	Protein CGI-38; structural genomics, NPPSFA, natio	93.0
4fl4_A	88	Glycoside hydrolase family 9; structural genomics,	92.06
2kav_A	129	Sodium channel protein type 2 subunit alpha; volta	91.32
4dh2_B	82	Dockerin type 1; cellulosome, cohesin, type I cohe	89.6
3ul4_B	65	Cellulosome enzyme, dockerin type I; cohesin, type	89.41
2k60_A	150	Protein (stromal interaction molecule 1); EF-hand,	89.33
2jrf_A	184	Tubulin polymerization-promoting protein family me	89.3
2jrf_A	184	Tubulin polymerization-promoting protein family me	88.49
4dck_A	168	Sodium channel protein type 5 subunit alpha; IQ-mo	87.85
3ol3_A	107	Putative uncharacterized protein; tuberculosis, RV	87.29
4dck_A	168	Sodium channel protein type 5 subunit alpha; IQ-mo	86.55
2ccl_B	63	Endo-1,4-beta-xylanase Y; cell adhesion, cohesin/d	86.3
2lky_A	112	Uncharacterized protein; infectious disease, tuber	86.2
2vn6_B	64	Endoglucanase A; cell adhesion, carbohydrate metab	85.0
1wlm_A	151	Protein CGI-38; structural genomics, NPPSFA, natio	83.86
3te3_A	39	Polycystic kidney disease 2-like 1 protein; trimer	83.6
2y3n_B	71	Cellulosomal family-48 processive glycoside hydro;	83.07
2kvc_A	103	Putative uncharacterized protein; structural genom	82.41
2l5y_A	150	Stromal interaction molecule 2; EF-hand, SAM domai	81.95

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=99.95  E-value=4.2e-26  Score=169.25  Aligned_cols=177  Identities=83%  Similarity=1.223  Sum_probs=129.0

Q ss_pred             CcccccccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC
Q 030405            1 MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN   80 (178)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~   80 (178)
                      |.||+.|+..+..+.||+..+.++++++....+..+...++++..+++.++..|..+|.+..++|.|+..+|..++....
T Consensus         1 ~~~~~~~~~~~~~~~MG~~~s~~~~~~l~~~~~~~l~~~~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~~~   80 (226)
T 2zfd_A            1 MSQCVDGIKHLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN   80 (226)
T ss_dssp             -------------------------------CTHHHHHHSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCS
T ss_pred             CchhhhhHHHHHHHhhccchhhhccccCCHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhccC
Confidence            78999999999999999999998887888899999999999999999999999999986422689999999999987744


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCC
Q 030405           81 KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLS  160 (178)
Q Consensus        81 ~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~  160 (178)
                      ...+..++.+|+.+|.+++|.|+|+||..++..........+.++.+|+.||.|++|.|+.+||..++..++...|.+++
T Consensus        81 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~  160 (226)
T 2zfd_A           81 KKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLK  160 (226)
T ss_dssp             SCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCC
T ss_pred             cccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCC
Confidence            44556678899999999999999999999998876545677889999999999999999999999999877666788999


Q ss_pred             HHHHHHHHHHHHhhccC
Q 030405          161 DDVIESIIDKVLSLIQL  177 (178)
Q Consensus       161 ~~~~~~~~~~~~~~~D~  177 (178)
                      +++++.+++.+|..+|.
T Consensus       161 ~~~~~~~~~~~f~~~D~  177 (226)
T 2zfd_A          161 DTVIEDIIDKTFEEADT  177 (226)
T ss_dssp             HHHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHhCC
Confidence            99999999999998874

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=99.90  E-value=2.8e-22  Score=146.25  Aligned_cols=162  Identities=56%  Similarity=0.979  Sum_probs=128.6

Q ss_pred             hcccCccccC----CCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHH
Q 030405           16 VNCCDADLYK----QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF   91 (178)
Q Consensus        16 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf   91 (178)
                      ||+..+++++    .+.....+..+...++++..+++.++..|..+|.+..++|.|+..+|..++..........++.+|
T Consensus         1 MG~~~s~~~~~~~~g~l~~~el~~l~~~~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~f   80 (207)
T 2ehb_A            1 MGCSVSKKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIF   80 (207)
T ss_dssp             --------------------CHHHHHHHSSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHSCTTCCCHHHHHHH
T ss_pred             CCcchhhHHhhccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhccccccHHHHHHHH
Confidence            6777666544    455668899999999999999999999999998642267999999999998764444456678899


Q ss_pred             HHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405           92 DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus        92 ~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      +.+|.+++|.|+|.||...+..........+.++.+|+.+|.|++|+|+.+||..++..++...|..+++++++.++..+
T Consensus        81 ~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~  160 (207)
T 2ehb_A           81 DVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKA  160 (207)
T ss_dssp             HHHCTTCSSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred             HHhcCCCCCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHH
Confidence            99999999999999999999887654566788999999999999999999999999987766668899999999999999


Q ss_pred             HhhccC
Q 030405          172 LSLIQL  177 (178)
Q Consensus       172 ~~~~D~  177 (178)
                      |..+|.
T Consensus       161 f~~~D~  166 (207)
T 2ehb_A          161 FVQADR  166 (207)
T ss_dssp             HHHHCT
T ss_pred             HHHhCC
Confidence            998874

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=99.87  E-value=2.3e-22  Score=148.10  Aligned_cols=161  Identities=20%  Similarity=0.287  Sum_probs=122.8

Q ss_pred             ccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcc-----cCCC-C--CcccHHHHHHHHhc
Q 030405            7 GLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISS-----AVID-D--GLINKEEFQLALFK   78 (178)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~-----~~~~-~--g~i~~~ef~~~l~~   78 (178)
                      |..-.....||+..+.+++     +.+..+...+.|++.+++.++..|..+|+     +  + +  |.|+..+|.. +..
T Consensus        15 ~~~~~~~~~MG~~~s~l~~-----e~l~~l~~~t~~s~~ei~~l~~~F~~~D~~~~~~d--~~~~dG~I~~~E~~~-l~~   86 (214)
T 2l4h_A           15 GHIDDDDKHMGGSGSRLSK-----ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSV--ESSLRAQVPFEQILS-LPE   86 (214)
T ss_dssp             ----------------CCH-----HHHHHHHSCCSCCHHHHHHHHHHHHHHSCGGGCCH--HHHTTSEECHHHHTT-CHH
T ss_pred             CCCCccccccCCccCCCCH-----HHHHHHHHhCCCCHHHHHHHHHHHHHhCccccccc--ccccCCcCCHHHHHH-hhc
Confidence            4455566789999998888     89999999999999999999999999997     5  5 6  9999999998 544


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCc-ccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhh-cC
Q 030405           79 TNKKESLFADRVFDLFDTKHNGI-LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE-SG  156 (178)
Q Consensus        79 ~~~~~~~~~~~lf~~~d~~~~g~-i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~-~~  156 (178)
                      .+....  .+++|+.+|.+++|. |+|+||+.++..........+.++.+|+.||.|++|+|+.+||..++..+... .+
T Consensus        87 lg~~~~--~~~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~  164 (214)
T 2l4h_A           87 LKANPF--KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGED  164 (214)
T ss_dssp             HHTSTT--HHHHHHHHCCSSSCCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSC
T ss_pred             cCCChH--HHHHHHHhCcCCCCCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccC
Confidence            333322  468999999999999 99999999998877644556789999999999999999999999999887321 11


Q ss_pred             CCCCHHHHHHHHHHHHhhccC
Q 030405          157 MNLSDDVIESIIDKVLSLIQL  177 (178)
Q Consensus       157 ~~l~~~~~~~~~~~~~~~~D~  177 (178)
                      ..+++++++.+++.+|..+|.
T Consensus       165 ~~~s~~e~~~~~~~~~~~~D~  185 (214)
T 2l4h_A          165 TRLSASEMKQLIDNILEESDI  185 (214)
T ss_dssp             TTCSCTHHHHHHHHHHHHHCC
T ss_pred             CCCCHHHHHHHHHHHHHHhCC
Confidence            368888999999999998874

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=99.87  E-value=1.9e-21  Score=141.45  Aligned_cols=149  Identities=24%  Similarity=0.422  Sum_probs=122.1

Q ss_pred             hcccCcc-ccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 030405           16 VNCCDAD-LYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLF   94 (178)
Q Consensus        16 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~   94 (178)
                      ||+..+. +++     ..+..+.....+++.+++.++..|..+|.+  ++|.|+..+|..+ ...+....  +..+|..+
T Consensus         1 Mg~~~s~~l~~-----~~~~~~~~~~~ls~~~~~~l~~~F~~~D~d--~dG~I~~~El~~~-~~lg~~~~--~~~l~~~~   70 (202)
T 2bec_A            1 MGSRSSHAAVI-----PDGDSIRRETGFSQASLLRLHHRFRALDRN--KKGYLSRMDLQQI-GALAVNPL--GDRIIESF   70 (202)
T ss_dssp             ----------C-----CSTTTHHHHHCCCHHHHHHHHHHHHHHCSS--CSSCCCHHHHHTC-HHHHHSTT--HHHHHHTT
T ss_pred             CCCcccCCcCH-----HHHHHHHHccCCCHHHHHHHHHHHHHHCCC--CCCCcCHHHHHHH-HhcCCCcc--HHHHHHHh
Confidence            5666665 666     889999999999999999999999999999  9999999999987 44332222  78999999


Q ss_pred             hcCCCCcccHHHHHHHHHhhCC----------------CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCC
Q 030405           95 DTKHNGILDFEEFARALSIFHP----------------NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN  158 (178)
Q Consensus        95 d~~~~g~i~~~ef~~~~~~~~~----------------~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~  158 (178)
                      |.+++|.|+|+||+.++.....                .....+.++.+|+.||.|++|+|+.+||..++..+   .|..
T Consensus        71 D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~---~g~~  147 (202)
T 2bec_A           71 FPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLM---VGVQ  147 (202)
T ss_dssp             SCSSCCCCCHHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHS---CCSC
T ss_pred             CCCCCCcCcHHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh---cCCC
Confidence            9999999999999999987764                34567889999999999999999999999998764   2778


Q ss_pred             CCHHHHHHHHHHHHhhccC
Q 030405          159 LSDDVIESIIDKVLSLIQL  177 (178)
Q Consensus       159 l~~~~~~~~~~~~~~~~D~  177 (178)
                      ++++++..++..+|..+|.
T Consensus       148 ~~~~~~~~~~~~~~~~~D~  166 (202)
T 2bec_A          148 VTEEQLENIADRTVQEADE  166 (202)
T ss_dssp             CCHHHHHHHHHHHHHHHCS
T ss_pred             CCHHHHHHHHHHHHHHcCC
Confidence            9999999999998888773

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=99.85  E-value=9.7e-21  Score=138.42  Aligned_cols=149  Identities=29%  Similarity=0.520  Sum_probs=120.7

Q ss_pred             hcccCcc-ccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 030405           16 VNCCDAD-LYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLF   94 (178)
Q Consensus        16 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~   94 (178)
                      ||+..+. +++     ..+..+.+.+.+++.+++.++..|..+|.+  ++|.|+..+|..++ ..+...  ..+.+|+.+
T Consensus         1 MG~~~s~~l~~-----~~~~~l~~~~~ls~~~~~~l~~~F~~~D~d--~dG~Is~~El~~~~-~lg~~~--~~~~l~~~~   70 (208)
T 2ct9_A            1 MGSRASTLLRD-----EELEEIKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIP-ELAINP--LGDRIINAF   70 (208)
T ss_dssp             -------CCCH-----HHHHHHHHHHCCCHHHHHHHHHHHHHHCTT--CSSEECTGGGGGCH-HHHTST--THHHHHHTT
T ss_pred             CCCCcCCCCCH-----HHHHHHHHcCCCCHHHHHHHHHHHHHHCCC--CCCcCcHHHHHHHH-HcCCCC--cHHHHHHHH
Confidence            6766665 666     899999999999999999999999999999  99999999998854 222222  236799999


Q ss_pred             hcCCCCcccHHHHHHHHHhhCCCC---------------ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCC
Q 030405           95 DTKHNGILDFEEFARALSIFHPNS---------------PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNL  159 (178)
Q Consensus        95 d~~~~g~i~~~ef~~~~~~~~~~~---------------~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l  159 (178)
                      |.+++|.|+|+||+.++.......               ...+.++.+|+.||.|++|+|+.+||..++..+   .|..+
T Consensus        71 d~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~---~g~~~  147 (208)
T 2ct9_A           71 FSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMM---VGVNI  147 (208)
T ss_dssp             SCTTCSCEEHHHHHHHHHTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH---SCTTC
T ss_pred             cCCCCCcCcHHHHHHHHHhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHH---hCCCC
Confidence            999999999999999988764311               256789999999999999999999999999775   37789


Q ss_pred             CHHHHHHHHHHHHhhccC
Q 030405          160 SDDVIESIIDKVLSLIQL  177 (178)
Q Consensus       160 ~~~~~~~~~~~~~~~~D~  177 (178)
                      ++++++.+++.+|..+|.
T Consensus       148 s~~~~~~l~~~~~~~~D~  165 (208)
T 2ct9_A          148 SDEQLGSIADRTIQEADQ  165 (208)
T ss_dssp             CHHHHHHHHHHHHHHHCS
T ss_pred             CHHHHHHHHHHHHHHhCC
Confidence            999999999998988874

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.84  E-value=3.5e-20  Score=128.68  Aligned_cols=125  Identities=17%  Similarity=0.355  Sum_probs=110.6

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP  119 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~  119 (178)
                      .||+++++.++.+|..+|.+  ++|.|+..+|..++...+ ......+..++..+|.+++|.|+|.+|...+........
T Consensus         3 ~lt~eqi~el~~~F~~~D~d--~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~   80 (148)
T 2lmt_A            3 ELTEEQIAEFKDAFVQFDKE--GTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETD   80 (148)
T ss_dssp             SCCSHHHHHHHHHHHHHHCS--SCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTT
T ss_pred             CCCHHHHHHHHHHHHHHcCC--CCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccC
Confidence            48899999999999999999  999999999999987744 344566789999999999999999999998887766566


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ..+.++.+|+.||.|++|+|+.+||+.++..+    |.+++.++++.++..+
T Consensus        81 ~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~----g~~~~~~e~~~l~~~~  128 (148)
T 2lmt_A           81 TEEEMREAFKIFDRDGDGFISPAELRFVMINL----GEKVTDEEIDEMIREA  128 (148)
T ss_dssp             THHHHHHHHHHHHSSCSSEECHHHHHHHHHHH----TCCCCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHc----CccccHHHHHHHHHHh
Confidence            77889999999999999999999999999887    8899999988776655

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.83  E-value=3.6e-20  Score=132.53  Aligned_cols=126  Identities=17%  Similarity=0.339  Sum_probs=111.2

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS  118 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~  118 (178)
                      ++||+++++.++++|..+|.+  ++|.|+..+|..++...+. .....+..++..+|.+++|.|+|.+|...+.......
T Consensus         3 ~~Lt~eqi~elk~~F~~~D~d--~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~   80 (176)
T 2lhi_A            3 SNLTEEQIAEFKEAFALFDKD--NNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSN   80 (176)
T ss_dssp             CCCCTTGGGHHHHHHHTTCSS--CSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSS
T ss_pred             CcCCHHHHHHHHHHHHHHCCC--CCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccC
Confidence            468999999999999999999  9999999999999877543 3456788999999999999999999999887766545


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ...+.++.+|+.||.|++|+|+.+||+.+|..+    |.++++++++++++.+
T Consensus        81 ~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~----g~~~~~~ei~~l~~~~  129 (176)
T 2lhi_A           81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSI----GEKLTDAEVDDMLREV  129 (176)
T ss_dssp             HHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTT----TCCCCHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc----CcccchHHHHHHHHhh
Confidence            566789999999999999999999999998765    8899999999888765

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=99.83  E-value=6.6e-19  Score=126.70  Aligned_cols=151  Identities=28%  Similarity=0.461  Sum_probs=120.3

Q ss_pred             hcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC--CCHHHHHHHHHH
Q 030405           16 VNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK--KESLFADRVFDL   93 (178)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~--~~~~~~~~lf~~   93 (178)
                      ||+..+.+++     ..+..+...+.++..++..+...|+..+    ++|.|+..+|..++...+.  .....++.+|+.
T Consensus         1 MG~~~s~l~~-----~~l~~l~~~~~~~~~~i~~~f~~fd~~~----~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~   71 (193)
T 1bjf_A            1 MGKQNSKLRP-----EVMQDLLESTDFTEHEIQEWYKGFLRDC----PSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRT   71 (193)
T ss_dssp             ----CCCCCH-----HHHHHHHHHSSCCHHHHHHHHHHHHHHS----TTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHH
T ss_pred             CCcccccCCH-----HHHHHHHHHcCCCHHHHHHHHHHHHHHC----CCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHH
Confidence            7888888877     8999999999999999988888887543    5899999999999876433  345668999999


Q ss_pred             HhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcC--CCCCHH--HHHHHHH
Q 030405           94 FDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG--MNLSDD--VIESIID  169 (178)
Q Consensus        94 ~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~--~~l~~~--~~~~~~~  169 (178)
                      +|.+++|.|++.||..++..... ....+.++.+|+.+|.|++|.|+.+||..++..++...|  ..++..  .....+.
T Consensus        72 ~D~d~~g~i~~~Ef~~~~~~~~~-~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  150 (193)
T 1bjf_A           72 FDANGDGTIDFREFIIALSVTSR-GKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTE  150 (193)
T ss_dssp             HCSSCSSEEEHHHHHHHHHHHTS-SCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHH
T ss_pred             hCCCCCCcCcHHHHHHHHHHHcC-CCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHH
Confidence            99999999999999999988766 567788999999999999999999999999988755445  345543  2344566


Q ss_pred             HHHhhcc
Q 030405          170 KVLSLIQ  176 (178)
Q Consensus       170 ~~~~~~D  176 (178)
                      .+|..+|
T Consensus       151 ~~f~~~D  157 (193)
T 1bjf_A          151 KIFRQMD  157 (193)
T ss_dssp             HHHHHSC
T ss_pred             HHHHHhC
Confidence            7777766

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.82  E-value=2.3e-19  Score=142.19  Aligned_cols=131  Identities=18%  Similarity=0.352  Sum_probs=110.5

Q ss_pred             HHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           36 LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        36 ~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ......++++|++.|+++|..+|.+  ++|.|+..||..+|...+.. ....++.+|+.+|.+++|.|+|+||+.++...
T Consensus       290 ePs~E~Lt~EEI~ELREaF~~fDkD--gdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~  367 (440)
T 3u0k_A          290 EPTRDQLTEEQIAEFKEAFSLFDKD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARK  367 (440)
T ss_dssp             CCBCBCCCHHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC
T ss_pred             HhhHhhhhHHHHHHHHHHHHHHcCC--CCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            3344579999999999999999999  99999999999999875543 45678999999999999999999999998766


Q ss_pred             CCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 030405          115 HPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL  172 (178)
Q Consensus       115 ~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~  172 (178)
                      ......++.++.+|+.||.|++|+|+.+||+++|..+    |..+++++++.+++.+-
T Consensus       368 lk~~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~l----Ge~LSdeEIdeLfke~D  421 (440)
T 3u0k_A          368 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVDEMIREAD  421 (440)
T ss_dssp             ------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHH----TCCCCHHHHHHHHHHHC
T ss_pred             hcCCChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHh----CCCCCHHHHHHHHHHhC
Confidence            5545567889999999999999999999999999887    88999999887776653

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=99.82  E-value=1e-19  Score=130.17  Aligned_cols=142  Identities=21%  Similarity=0.337  Sum_probs=118.5

Q ss_pred             CcHHHHHhhcCCCHHHHHHHHHHHHhhcc-----cCCC-C--CcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCc-
Q 030405           31 EDPEALARETVFSVSEIEALYELFKKISS-----AVID-D--GLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGI-  101 (178)
Q Consensus        31 ~~~~~~~~~~~~~~~~i~~l~~~F~~~d~-----~~~~-~--g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~-  101 (178)
                      +.+..+.+.+.+++.++..++..|..+|.     +  + +  |.|+..+|.. +...+....  ...+|..+|.+++|. 
T Consensus         3 ~~l~~l~~~~~ls~~~~~~l~~~F~~~D~~~~~~~--~~~~~G~i~~~el~~-l~~~g~~~~--~~~l~~~~D~d~~G~~   77 (183)
T 1dgu_A            3 ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSV--ESSLRAQVPFEQILS-LPELKANPF--KERICRVFSTSPAKDS   77 (183)
T ss_dssp             SSCSCCCCCCSCCHHHHHHHHHHHHHHSCSTTCSS--CCCTTTCSCHHHHHT-STTSSSCTT--HHHHHHHHSCSSSSCC
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHhCccccccc--cccccCcCcHHHHHH-HHhhhcCcH--HHHHHHHhCCCCCCCE
Confidence            56677778889999999999999999998     6  7 8  9999999999 766554443  368999999999999 


Q ss_pred             ccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhh-cCCCCCHHHHHHHHHHHHhhccC
Q 030405          102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE-SGMNLSDDVIESIIDKVLSLIQL  177 (178)
Q Consensus       102 i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~-~~~~l~~~~~~~~~~~~~~~~D~  177 (178)
                      |+|+||+.++..........+.++.+|+.||.|++|+|+.+||..++..+... .+.+++++++..+++.+|..+|.
T Consensus        78 I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~  154 (183)
T 1dgu_A           78 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDI  154 (183)
T ss_dssp             CCHHHHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCT
T ss_pred             ecHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCC
Confidence            99999999998877644556789999999999999999999999999887210 01267888999988889988773

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.82  E-value=5.2e-19  Score=123.43  Aligned_cols=126  Identities=17%  Similarity=0.322  Sum_probs=109.0

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS  118 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~  118 (178)
                      ..+++.++..+...|..+|.+  ++|.|+..+|..++...+. .....+..+|..+|.+++|.|+|+||+..+.......
T Consensus        15 ~~l~~~~~~~l~~~F~~~D~~--~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~   92 (161)
T 3fwb_A           15 SELLEEQKQEIYEAFSLFDMN--NDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKR   92 (161)
T ss_dssp             TTSCHHHHHHHHHHHHHHCTT--SSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcC
Confidence            358999999999999999999  9999999999999877543 3456789999999999999999999999987654435


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ...+.++.+|+.+|.|++|.|+.+||..++..+    |.++++++++.++..+
T Consensus        93 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~----~~~~~~~~~~~~~~~~  141 (161)
T 3fwb_A           93 DPLDEIKRAFQLFDDDHTGKISIKNLRRVAKEL----GETLTDEELRAMIEEF  141 (161)
T ss_dssp             CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT----TCCCCHHHHHHHHHTT
T ss_pred             CcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHh----CCCCCHHHHHHHHHHh
Confidence            667889999999999999999999999999876    8889998877665543

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.81  E-value=3.1e-19  Score=123.52  Aligned_cols=126  Identities=19%  Similarity=0.353  Sum_probs=107.2

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP  119 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~  119 (178)
                      .++++++..++..|..+|.+  ++|.|+..+|..++...+ ......+..+|+.+|.+++|.|+|+||+.++........
T Consensus         3 ~l~~~~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   80 (148)
T 1exr_A            3 QLTEEQIAEFKEAFALFDKD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQD   80 (148)
T ss_dssp             CCCHHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCC
Confidence            47889999999999999999  999999999999987744 334566889999999999999999999998865432223


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL  172 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~  172 (178)
                      ..+.++.+|+.||.|++|+|+.+||+.++..+    |.++++++++.++..+-
T Consensus        81 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~----g~~~~~~~~~~~~~~~d  129 (148)
T 1exr_A           81 SEEELIEAFKVFDRDGNGLISAAELRHVMTNL----GEKLTDDEVDEMIREAD  129 (148)
T ss_dssp             HHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHT----TCCCCHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh----CCCCCHHHHHHHHHHhC
Confidence            45778999999999999999999999999776    88899999887776653

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.81  E-value=1.4e-19  Score=124.75  Aligned_cols=124  Identities=19%  Similarity=0.332  Sum_probs=105.0

Q ss_pred             CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChh
Q 030405           43 SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPID  121 (178)
Q Consensus        43 ~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~  121 (178)
                      +++++..++..|..+|.+  ++|.|+..+|..++...+. .....+..++..+|.+++|.|+|+||+.++........+.
T Consensus         1 ~~~~~~~l~~~F~~~D~d--~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~   78 (143)
T 2obh_A            1 TEEQKQEIREAFDLFDAD--GTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTK   78 (143)
T ss_dssp             CHHHHHHHHHHHHTTCTT--CCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCC--CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHH
Confidence            457889999999999999  9999999999999987554 4456789999999999999999999998876543212345


Q ss_pred             HHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 030405          122 DKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL  172 (178)
Q Consensus       122 e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~  172 (178)
                      +.++.+|+.||.|++|+|+.+||+.++..+    |..+++++++.++..+-
T Consensus        79 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~----g~~~~~~~~~~~~~~~D  125 (143)
T 2obh_A           79 EEILKAFKLFDDDETGKISFKNLKRVAKEL----GENLTDEELQEMIDEAD  125 (143)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHT----TCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHh----CCCCCHHHHHHHHHHhC
Confidence            678999999999999999999999998775    88899999888776653

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=99.81  E-value=4e-19  Score=123.29  Aligned_cols=127  Identities=32%  Similarity=0.584  Sum_probs=109.2

Q ss_pred             CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhH
Q 030405           43 SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDD  122 (178)
Q Consensus        43 ~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e  122 (178)
                      +++++++++..|..+|.+  ++|.|+..+| ..+...+...  .+..+|+.+|.+++|.|+|+||+.++..........+
T Consensus         1 s~~~~~~l~~~F~~~D~d--~~G~i~~~el-~~l~~~~~~~--~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~   75 (155)
T 3ll8_B            1 DADEIKRLGKRFKKLDLD--NSGSLSVEEF-MSLPELQQNP--LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQ   75 (155)
T ss_dssp             CCHHHHHHHHHHHHHCTT--CSSSBCHHHH-TTSGGGTTCT--THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHH
T ss_pred             CHHHHHHHHHHHHHhCcC--CCCeEcHHHH-HHhhccccch--HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHH
Confidence            457889999999999999  9999999999 4444433222  5689999999999999999999999988766567778


Q ss_pred             HHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhccC
Q 030405          123 KIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQL  177 (178)
Q Consensus       123 ~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~D~  177 (178)
                      .++.+|+.+|.|++|.|+.+||..++..+   .|.+++++++..++..+|..+|.
T Consensus        76 ~~~~~F~~~D~d~~G~i~~~e~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~D~  127 (155)
T 3ll8_B           76 KLRFAFRIYDMDKDGYISNGELFQVLKMM---VGNNLKDTQLQQIVDKTIINADK  127 (155)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHH---hccCCCHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999873   26789999999999998887763

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.81  E-value=1.1e-19  Score=127.16  Aligned_cols=123  Identities=21%  Similarity=0.346  Sum_probs=102.1

Q ss_pred             hhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC
Q 030405           38 RETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPN  117 (178)
Q Consensus        38 ~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~  117 (178)
                      +...+|+++++.++.+|..+|.+  ++|.|+..+|..++...+.....   ..+..+..+.++.|+|.+|+..+......
T Consensus         6 ~~~~Lt~~qi~elk~~F~~~D~d--~dG~I~~~El~~~l~~lg~~~~~---~~~~~~~~~~~~~i~f~ef~~~~~~~~~~   80 (153)
T 3i5g_B            6 RRVKLSQRQMQELKEAFTMIDQD--RDGFIGMEDLKDMFSSLGRVPPD---DELNAMLKECPGQLNFTAFLTLFGEKVSG   80 (153)
T ss_dssp             -CTTCCHHHHHHHHHHHHHHCCS--TTSCCCHHHHHHHHHHTTSCCCH---HHHHHHHHTSSSCCCSHHHHHTTTTTTTT
T ss_pred             cccCCCHHHHHHHHHHHHHHCCC--CCCeEcHHHHHHHHHHcCCCccH---HHHHHHHHhccCCccHHHHHHHHHhhhcc
Confidence            34569999999999999999999  99999999999999886655432   23344445667889999999998877665


Q ss_pred             CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHH
Q 030405          118 SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIID  169 (178)
Q Consensus       118 ~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~  169 (178)
                      ..+.+.++.+|+.||.|++|+|+.+||+.+|..+    |.++|+++++.+++
T Consensus        81 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~----g~~ls~~ei~~~~~  128 (153)
T 3i5g_B           81 TDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENM----GDNFSKEEIKNVWK  128 (153)
T ss_dssp             CCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHSS----SSCCCHHHHHHHHT
T ss_pred             cccHHHHHHHHhccccCCCCeEeHHHHHHHHHHc----CCcCCHHHHHHHHH
Confidence            5677899999999999999999999999998765    88999999876554

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.81  E-value=1.4e-18  Score=121.15  Aligned_cols=126  Identities=19%  Similarity=0.392  Sum_probs=109.6

Q ss_pred             cCCCHHHHHHHHHHHHhhc-ccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC
Q 030405           40 TVFSVSEIEALYELFKKIS-SAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPN  117 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d-~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~  117 (178)
                      ..++++++..+...|..+| .+  ++|.|+..+|..++...+. .....+..+|+.+|.+++|.|+|+||+..+......
T Consensus         5 ~~l~~~~~~~l~~~F~~~D~~~--~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~   82 (158)
T 2jnf_A            5 SKLSSNQVKLLETAFRDFETPE--GSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGE   82 (158)
T ss_dssp             TTSCHHHHHHHHHHHHHSBCSS--SCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCC
T ss_pred             hhCCHHHHHHHHHHHHHhCCCC--CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcc
Confidence            4588999999999999999 99  9999999999999877543 345678999999999999999999999999877653


Q ss_pred             C----ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          118 S----PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       118 ~----~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      .    ...+.++.+|+.+|.|++|.|+.+||..++..+    |..++++++..++..+
T Consensus        83 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~----g~~~~~~~~~~~~~~~  136 (158)
T 2jnf_A           83 EVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAEL----DETLSSEDLDAMIDEI  136 (158)
T ss_dssp             CCCTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHH----CTTCCHHHHHHHHHHH
T ss_pred             ccchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh----CCcCCHHHHHHHHHHh
Confidence            3    456779999999999999999999999999887    8889999888776654

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.81  E-value=1.1e-18  Score=119.48  Aligned_cols=123  Identities=20%  Similarity=0.332  Sum_probs=105.9

Q ss_pred             CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChh
Q 030405           43 SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPID  121 (178)
Q Consensus        43 ~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~  121 (178)
                      +++++..+...|..+|.+  ++|.|+..+|..++...+. .....+..+|+.+|.+++|.|+|+||+..+..........
T Consensus         1 ~~~~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~   78 (142)
T 2bl0_C            1 GDDQVSEFKEAFELFDSE--RTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSE   78 (142)
T ss_dssp             CCHHHHHHHHHHHHHCTT--CSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCH
T ss_pred             CHHHHHHHHHHHHHhCCC--CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChH
Confidence            356789999999999999  9999999999999877443 3456689999999999999999999999988644335677


Q ss_pred             HHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          122 DKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       122 e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      +.++.+|+.+|.|++|.|+.+||..++..+    |.++++++++.++..+
T Consensus        79 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~~~~  124 (142)
T 2bl0_C           79 DILRQAFRTFDPEGTGYIPKAALQDALLNL----GDRLKPHEFAEFLGIT  124 (142)
T ss_dssp             HHHHHHHHHTCCSSCSCEEHHHHHHHHHHS----SSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHc----CCCCCHHHHHHHHHHh
Confidence            889999999999999999999999999775    8889999988777655

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=99.81  E-value=1.4e-18  Score=124.04  Aligned_cols=141  Identities=30%  Similarity=0.544  Sum_probs=112.1

Q ss_pred             CcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC--CCHHHHHHHHHHHhcCCCCcccHHHHH
Q 030405           31 EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK--KESLFADRVFDLFDTKHNGILDFEEFA  108 (178)
Q Consensus        31 ~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~--~~~~~~~~lf~~~d~~~~g~i~~~ef~  108 (178)
                      ..+..+...++++..++..++..|+..|    ++|.|+..+|..++...+.  .....+..+|+.+|.+++|.|+++||.
T Consensus         4 ~el~~l~~~~~~s~~~i~~l~~~fd~~d----~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~   79 (183)
T 1s6c_A            4 EGLEQLEAQTNFTKRELQVLYRGFKNEX----PSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFV   79 (183)
T ss_dssp             --CHHHHHHSSCCHHHHHHHHHHHHHHC----TTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHhC----CCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence            6788889999999999999999998864    7899999999999876432  456778999999999999999999999


Q ss_pred             HHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCC----CCCHHHHHHHHHHHHhhcc
Q 030405          109 RALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGM----NLSDDVIESIIDKVLSLIQ  176 (178)
Q Consensus       109 ~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~----~l~~~~~~~~~~~~~~~~D  176 (178)
                      .++..... ....+.++.+|+.+|.|++|+|+.+||..++..+....|.    ++++......+..+|..+|
T Consensus        80 ~~~~~~~~-~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D  150 (183)
T 1s6c_A           80 TALSILLR-GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMD  150 (183)
T ss_dssp             HHHHHHHH-CCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHC
T ss_pred             HHHHHHcC-CCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhC
Confidence            99887655 5677889999999999999999999999999887554453    3565444556666666665

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=99.80  E-value=9.5e-19  Score=120.22  Aligned_cols=126  Identities=17%  Similarity=0.317  Sum_probs=108.9

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS  118 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~  118 (178)
                      ..+++.++..+...|..+|.+  ++|.|+..+|..++...+. .....+..+|..+|.+++|.|+|+||+..+.......
T Consensus         3 ~~l~~~~~~~l~~~F~~~D~~--~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~   80 (147)
T 4ds7_A            3 QNLTEEQIAEFKEAFALFDKD--NSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCN   80 (147)
T ss_dssp             -CCCHHHHHHHHHHHHHHCTT--CSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTH
T ss_pred             CcCCHHHHHHHHHHHHHHCCC--CCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCC
Confidence            358999999999999999999  9999999999999877443 3456689999999999999999999999987654323


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ...+.++.+|+.+|.|++|.|+.+||..++..+    |.+++++++..++..+
T Consensus        81 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~----~~~~~~~~~~~~~~~~  129 (147)
T 4ds7_A           81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSI----GEKLTDAEVDEMLREV  129 (147)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT----TCCCCHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHc----CCCCCHHHHHHHHHHh
Confidence            455789999999999999999999999999876    8889999988877765

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=99.80  E-value=2.5e-18  Score=123.40  Aligned_cols=146  Identities=25%  Similarity=0.445  Sum_probs=120.1

Q ss_pred             hcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--CCCHHHHHHHHHH
Q 030405           16 VNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--KKESLFADRVFDL   93 (178)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~~~~~~~~~lf~~   93 (178)
                      ||+..+.+++     ..+..+...+.++..+++.+...|+..  +  ++|.|+..+|..++....  ......+..+|+.
T Consensus         1 MG~~~~~l~~-----~~l~~l~~~~~~~~~~i~~~~~~fd~~--~--~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~   71 (190)
T 1fpw_A            1 MGAKTSKLSK-----DDLTCLKQSTYFDRREIQQWHKGFLRD--C--PSGQLAREDFVKIYKQFFPFGSPEDFANHLFTV   71 (190)
T ss_dssp             CCCCSCCSTT-----HHHHHHTTTCCSTHHHHHHHHHHHHHH--C--TTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHT
T ss_pred             CCcccCCCCH-----HHHHHHHHhcCCCHHHHHHHHHHHHHH--C--CCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence            7888888877     999999999999999999999999876  3  689999999999986632  2345568999999


Q ss_pred             HhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCC--------CCCHHHHH
Q 030405           94 FDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGM--------NLSDDVIE  165 (178)
Q Consensus        94 ~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~--------~l~~~~~~  165 (178)
                      +|.+++|.|++.||..++..+.. ....+.++.+|+.+|.|++|.|+.+||..++..++...|.        ..+++++.
T Consensus        72 ~D~d~~G~i~~~ef~~~~~~~~~-~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  150 (190)
T 1fpw_A           72 FDKDNNGFIHFEEFITVLSTTSR-GTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVK  150 (190)
T ss_dssp             CCSSCSSEECHHHHHHHHHHHSC-CCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHH
T ss_pred             HCCCCCCcEeHHHHHHHHHHHcc-CCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHH
Confidence            99999999999999999988776 4667889999999999999999999999999886543342        24555555


Q ss_pred             HHHHHH
Q 030405          166 SIIDKV  171 (178)
Q Consensus       166 ~~~~~~  171 (178)
                      .+++.+
T Consensus       151 ~~f~~~  156 (190)
T 1fpw_A          151 KIFKLM  156 (190)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            444443

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.80  E-value=1.1e-18  Score=122.90  Aligned_cols=128  Identities=18%  Similarity=0.333  Sum_probs=108.4

Q ss_pred             hhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC
Q 030405           38 RETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHP  116 (178)
Q Consensus        38 ~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~  116 (178)
                      ....+++.++..+...|..+|.+  ++|.|+..+|..++...+. .....+..+|..+|.+++|.|+|+||+..+.....
T Consensus        18 ~~~~l~~~~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~   95 (169)
T 3qrx_A           18 GRVGLTEEQKQEIREAFDLFDTD--GSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMG   95 (169)
T ss_dssp             --CCCCHHHHHHHHHHHHHHCTT--CCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHhCCC--CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhc
Confidence            34568999999999999999999  9999999999999977554 34567899999999999999999999998876443


Q ss_pred             CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          117 NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       117 ~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      .....+.+..+|+.+|.|++|.|+.+||..++..+    |.++++++++.++..+
T Consensus        96 ~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~~~~  146 (169)
T 3qrx_A           96 ERDSREEILKAFRLFDDDNSGTITIKDLRRVAKEL----GENLTEEELQEMIAEA  146 (169)
T ss_dssp             HHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHT----TCCCCHHHHHHHHHHH
T ss_pred             ccCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc----CCCCCHHHHHHHHHHh
Confidence            22345678999999999999999999999999876    8889999988766654

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.79  E-value=9.4e-19  Score=123.18  Aligned_cols=124  Identities=16%  Similarity=0.210  Sum_probs=102.0

Q ss_pred             CCCHHHHHHHHHHHHhhcc--cCCCCCcccHHHHHHHHhcCCCCC-HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC
Q 030405           41 VFSVSEIEALYELFKKISS--AVIDDGLINKEEFQLALFKTNKKE-SLFADRVFDLFDTKHNGILDFEEFARALSIFHPN  117 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~--~~~~~g~i~~~ef~~~l~~~~~~~-~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~  117 (178)
                      .||++|++.++++|..+|.  +  ++|.|+..+|..+|...+... ...+..++. .+.+++|.|+|++|+.++......
T Consensus         2 qLt~eqi~elre~F~~fD~~~d--~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~   78 (159)
T 3i5g_C            2 QLTKDEIEEVREVFDLFDFWDG--RDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSK   78 (159)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTT--SSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHCcCCC--CCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcc
Confidence            5899999999999999985  6  899999999999998866443 344555543 356678999999999988766542


Q ss_pred             --CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          118 --SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       118 --~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                        ....+.++.+|+.||.|++|+|+.+||+++|..+    |.++++++++.+++.+
T Consensus        79 ~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~----g~~ls~~e~~~l~~~~  130 (159)
T 3i5g_C           79 DTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKML----GERITEDQCNDIFTFC  130 (159)
T ss_dssp             CTTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHS----SSCCCHHHHHHHHHHT
T ss_pred             cccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHh----CCCCCHHHHHHHHHHh
Confidence              3446789999999999999999999999999776    8999999988777654

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.79  E-value=5.7e-18  Score=116.91  Aligned_cols=126  Identities=21%  Similarity=0.299  Sum_probs=107.2

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP  119 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~  119 (178)
                      .+++.+++.+...|..+|.+  ++|.|+..+|..++...+ ......+..+|..+|.+++|.|+|+||+..+........
T Consensus         4 ~l~~~~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   81 (153)
T 3ox6_A            4 SLRPEEIEELREAFREFDKD--KDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAET   81 (153)
T ss_dssp             CCCHHHHHHHHHHHHHHHHH--CSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCC
T ss_pred             cCCHHHHHHHHHHHHHhCCC--CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccc
Confidence            58999999999999999999  999999999999987754 344566889999999999999999999998876544222


Q ss_pred             h----hHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          120 I----DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       120 ~----~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      .    .+.++.+|+.+|.+++|.|+.+||..++..+   .|.++++++++.++..+
T Consensus        82 ~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~---~~~~~~~~~~~~~~~~~  134 (153)
T 3ox6_A           82 ADMIGVKELRDAFREFDTNGDGEISTSELREAMRAL---LGHQVGHRDIEEIIRDV  134 (153)
T ss_dssp             HHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH---HSSCCCHHHHHHHHHHH
T ss_pred             cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH---hcCCCCHHHHHHHHHHh
Confidence            1    4678999999999999999999999999883   28889999988776655

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=99.79  E-value=3.5e-18  Score=126.48  Aligned_cols=148  Identities=28%  Similarity=0.496  Sum_probs=115.3

Q ss_pred             cCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC--CCHHHHHHHHHHHhcCCCCc
Q 030405           24 YKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK--KESLFADRVFDLFDTKHNGI  101 (178)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~--~~~~~~~~lf~~~d~~~~g~  101 (178)
                      ++.......+..+...++++..+++.++..|+..|    ++|.|+..+|..++...+.  .....++.+|+.+|.+++|.
T Consensus        30 ~~~~l~~~~l~~l~~~~~~s~~ei~~l~~~Fd~~d----~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~  105 (224)
T 1s1e_A           30 TMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNEC----PSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS  105 (224)
T ss_dssp             --------CHHHHHHHSSCCHHHHHHHHHHHHHHC----TTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSC
T ss_pred             CccCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhhC----CCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCc
Confidence            34445568899999999999999999999999874    6899999999999877432  45677899999999999999


Q ss_pred             ccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCC----CCHHHHHHHHHHHHhhcc
Q 030405          102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN----LSDDVIESIIDKVLSLIQ  176 (178)
Q Consensus       102 i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~----l~~~~~~~~~~~~~~~~D  176 (178)
                      |+++||..++..... ....+.++.+|+.||.|++|+|+.+||..++..++...|..    +++......++.+|..+|
T Consensus       106 I~~~Ef~~~l~~~~~-~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D  183 (224)
T 1s1e_A          106 VKFEDFVTALSILLR-GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMD  183 (224)
T ss_dssp             BCHHHHHHHHHHHHH-CCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHC
T ss_pred             EeHHHHHHHHHHHcc-CCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhC
Confidence            999999999887664 56778899999999999999999999999998875443432    444333445556666655

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=99.79  E-value=4e-18  Score=122.27  Aligned_cols=131  Identities=31%  Similarity=0.528  Sum_probs=109.4

Q ss_pred             hcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--CCCCHHHHHHHHHH
Q 030405           16 VNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--NKKESLFADRVFDL   93 (178)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~~~~~~~~~~lf~~   93 (178)
                      ||+..+.+++     +.+..+...+.++..+++.+...|+..+    ++|.|+..+|..++...  .......+..+|+.
T Consensus         1 MG~~~~~l~~-----~~l~~l~~~~~~~~~~i~~~f~~fd~~~----~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~   71 (190)
T 1g8i_A            1 MGKSNSKLKP-----EVVEELTRKTYFTEKEVQQWYKGFIKDC----PSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNV   71 (190)
T ss_dssp             ---CCCSCCH-----HHHHHHHHTSSSCHHHHHHHHHHHHHHC----TTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHH
T ss_pred             CCcccccCCH-----HHHHHHHHccCCCHHHHHHHHHHHHHhC----CCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHH
Confidence            7777777777     8999999999999999999999998763    68999999999998763  12445668999999


Q ss_pred             HhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcC
Q 030405           94 FDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG  156 (178)
Q Consensus        94 ~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~  156 (178)
                      +|.+++|.|++.||..++..... ....+.++.+|+.+|.|++|.|+.+||..++..++...|
T Consensus        72 ~D~d~~g~i~~~ef~~~~~~~~~-~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g  133 (190)
T 1g8i_A           72 FDENKDGRIEFSEFIQALSVTSR-GTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVG  133 (190)
T ss_dssp             HCTTCSSEEEHHHHHHHHHHHHH-CCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-
T ss_pred             HhcCCCCeEeHHHHHHHHHHhcC-CCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhC
Confidence            99999999999999999887755 466788999999999999999999999999988654333

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=99.79  E-value=6e-19  Score=131.02  Aligned_cols=119  Identities=30%  Similarity=0.609  Sum_probs=104.4

Q ss_pred             CcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCCCCHHHHHHHHHHHhcCCCCcccHHHHH
Q 030405           31 EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILDFEEFA  108 (178)
Q Consensus        31 ~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~  108 (178)
                      ..+..+...+++++++++.++..|...|    ++|.|+..+|..++..  ........++.+|+.+|.+++|.|+|+||.
T Consensus        50 ~~l~~l~~~~~~s~~ei~~l~~~F~~~d----~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~  125 (229)
T 3dd4_A           50 EALELLEAQSKFTKKELQILYRGFKNEC----PSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFI  125 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTC----CSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHH
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHhhC----CCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHH
Confidence            7888999999999999999999998754    7799999999999876  233445668899999999999999999999


Q ss_pred             HHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhh
Q 030405          109 RALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE  154 (178)
Q Consensus       109 ~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~  154 (178)
                      .++..... ....+.++.+|+.||.|++|+|+.+||..++..++..
T Consensus       126 ~~l~~~~~-~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~  170 (229)
T 3dd4_A          126 KGLSILLR-GTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDM  170 (229)
T ss_dssp             HHHHHHHH-SCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHH
T ss_pred             HHHHHHcC-CChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHH
Confidence            99987765 5677899999999999999999999999999987543

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=99.78  E-value=1.4e-17  Score=114.56  Aligned_cols=122  Identities=13%  Similarity=0.243  Sum_probs=105.8

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHH---hcCCCCcccHHHHHHHHHhh--C
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLF---DTKHNGILDFEEFARALSIF--H  115 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~---d~~~~g~i~~~ef~~~~~~~--~  115 (178)
                      +++.++.++...|..+|.+  ++|.|+..+|..++...+. .....+..+|+.+   |.++ |.|+|++|+..+...  .
T Consensus         2 l~~~~~~~l~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~   78 (149)
T 2mys_C            2 FSKAAADDFKEAFLLFDRT--GDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANN   78 (149)
T ss_pred             CCHHHHHHHHHHHHHhCCC--CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhcc
Confidence            6889999999999999999  9999999999999877443 3456688999999   9999 999999999998876  3


Q ss_pred             CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 030405          116 PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK  170 (178)
Q Consensus       116 ~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~  170 (178)
                      ......+.++.+|+.+|.+++|.|+.+||..++..+    |.+++++++..++..
T Consensus        79 ~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~~~  129 (149)
T 2mys_C           79 KDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATL----GEKMTEEEVEELMKG  129 (149)
T ss_pred             CCcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHh----CCCCCHHHHHHHHhh
Confidence            334566789999999999999999999999999886    788999998877665

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.78  E-value=2.4e-18  Score=120.18  Aligned_cols=125  Identities=20%  Similarity=0.340  Sum_probs=105.7

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCC-CCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC--
Q 030405           41 VFSVSEIEALYELFKKISSAVID-DGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHP--  116 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~-~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~--  116 (178)
                      .+++.++..+...|..+|.+  + +|.|+..+|..++...+. .....+..+|+.+|.+++|.|+|+||...+.....  
T Consensus        11 ~l~~~~~~~l~~~F~~~D~~--~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~   88 (161)
T 1dtl_A           11 QLTEEQKNEFKAAFDIFVLG--AEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD   88 (161)
T ss_dssp             GSCHHHHHHHHHHHHHHTTT--CGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC--
T ss_pred             hCCHHHHHHHHHHHHHHcCC--CCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhccc
Confidence            48899999999999999999  9 999999999999977543 34567899999999999999999999998887653  


Q ss_pred             -CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          117 -NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       117 -~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                       .....+.++.+|+.+|.|++|.|+.+||..++..+    |.+++++++..++..+
T Consensus        89 ~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~----g~~~~~~~~~~~~~~~  140 (161)
T 1dtl_A           89 SKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQAT----GETITEDDIEELMKDG  140 (161)
T ss_dssp             ---CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC------CCCHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh----CCCCCHHHHHHHHHHh
Confidence             34567889999999999999999999999998654    7789998887776655

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=99.77  E-value=8.9e-18  Score=122.29  Aligned_cols=153  Identities=30%  Similarity=0.424  Sum_probs=120.0

Q ss_pred             hhhcccCc-cccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC--CCHHHHHHH
Q 030405           14 VVVNCCDA-DLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK--KESLFADRV   90 (178)
Q Consensus        14 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~--~~~~~~~~l   90 (178)
                      ..||+..+ .+++     ..+..+.+..+++..++..+...|+..+    ++|.|+..+|..++.....  .....+..+
T Consensus         6 ~~mg~~~~g~l~~-----~el~~~~~~~~~~~~~i~~~f~~~d~~~----~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~   76 (207)
T 2d8n_A            6 SGMGNSKSGALSK-----EILEELQLNTKFSEEELCSWYQSFLKDC----PTGRITQQQFQSIYAKFFPDTDPKAYAQHV   76 (207)
T ss_dssp             --CTTCCTTCCCH-----HHHHHHHHHSSCCHHHHHHHHHHHHHHC----TTSEEEHHHHHHHHHHTCTTSCCHHHHHHH
T ss_pred             hhhccccCCCCCH-----HHHHHHHHHcCCCHHHHHHHHHHHHhhC----CCCCCCHHHHHHHHHHhccCCCcHHHHHHH
Confidence            45665443 5556     8999999999999999998888887653    4899999999999877432  456678999


Q ss_pred             HHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcC----CCCCHH--HH
Q 030405           91 FDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG----MNLSDD--VI  164 (178)
Q Consensus        91 f~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~----~~l~~~--~~  164 (178)
                      |+.+|.+++|.|+++||..++..+.. ....+.++.+|+.+|.|++|.|+.+||..++..++...|    ..+++.  ..
T Consensus        77 f~~~D~d~~G~i~~~Ef~~~~~~~~~-~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~  155 (207)
T 2d8n_A           77 FRSFDSNLDGTLDFKEYVIALHMTTA-GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTP  155 (207)
T ss_dssp             HHHHCTTCCSEEEHHHHHHHHHHHSC-SSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSH
T ss_pred             HHHhcCCCCCeEeHHHHHHHHHHHcC-CCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccH
Confidence            99999999999999999999988765 456678999999999999999999999999988754445    455542  23


Q ss_pred             HHHHHHHHhhcc
Q 030405          165 ESIIDKVLSLIQ  176 (178)
Q Consensus       165 ~~~~~~~~~~~D  176 (178)
                      +..++.+|..+|
T Consensus       156 ~~~~~~~f~~~D  167 (207)
T 2d8n_A          156 EKRAEKIWKYFG  167 (207)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHcC
Confidence            345566666665

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=99.77  E-value=4.7e-18  Score=118.26  Aligned_cols=123  Identities=23%  Similarity=0.238  Sum_probs=106.4

Q ss_pred             CCCHHHHHHHHHHHHhhcc--cCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC
Q 030405           41 VFSVSEIEALYELFKKISS--AVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPN  117 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~--~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~  117 (178)
                      .++++++..++..|..+|.  +  ++|.|+..+|..++...+.. ....+..+ ..+|.+++|.|+|.||+..+......
T Consensus         2 ~ls~~~~~~l~~~F~~~D~~~d--~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~   78 (156)
T 1wdc_C            2 KLSQDEIDDLKDVFELFDFWDG--RDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDC   78 (156)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHTC--SSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTS
T ss_pred             CCCHHHHHHHHHHHHHHccCCC--CCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhc
Confidence            4789999999999999999  9  99999999999998775433 44567788 88999999999999999999877653


Q ss_pred             -CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 030405          118 -SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK  170 (178)
Q Consensus       118 -~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~  170 (178)
                       ....+.++.+|+.||.|++|.|+.+||..++..+    |..++++++..++..
T Consensus        79 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~----g~~~~~~~~~~~~~~  128 (156)
T 1wdc_C           79 EQGTFADYMEAFKTFDREGQGFISGAELRHVLTAL----GERLSDEDVDEIIKL  128 (156)
T ss_dssp             CCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHS----SSCCCHHHHHHHHHH
T ss_pred             cCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc----CCCCCHHHHHHHHHH
Confidence             4567889999999999999999999999999775    888999998877665

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=99.77  E-value=3.3e-18  Score=121.59  Aligned_cols=125  Identities=19%  Similarity=0.392  Sum_probs=103.4

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP  119 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~  119 (178)
                      .++++++..+...|..+|.+  ++|.|+..+|..++...+. .....+..+|+.+|.+++|.|+|+||...+........
T Consensus         4 ~l~~~~~~~l~~~F~~~D~d--~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~   81 (179)
T 2f2o_A            4 QLTEEQIAEFKEAFSLFDKD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD   81 (179)
T ss_dssp             --CCSHHHHHHHHHHHHCTT--CSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcc
Confidence            47788899999999999999  9999999999999877543 34566899999999999999999999998876533223


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ..+.++.+|+.+|.|++|.|+.+||..++..+    |.+++++++..++..+
T Consensus        82 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~----g~~~~~~~~~~~~~~~  129 (179)
T 2f2o_A           82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVDEMIREA  129 (179)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC------CCCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh----CCCCCHHHHHHHHHHc
Confidence            45678999999999999999999999998775    7789999888776655

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=99.76  E-value=1.6e-17  Score=119.27  Aligned_cols=146  Identities=31%  Similarity=0.491  Sum_probs=115.9

Q ss_pred             hcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--CCCHHHHHHHHHH
Q 030405           16 VNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--KKESLFADRVFDL   93 (178)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~~~~~~~~~lf~~   93 (178)
                      ||+..+.+++     ..+..+.+..+++..+++.+...|+..+    ++|.|+..+|..++....  ......+..+|+.
T Consensus         1 Mg~~~~~l~~-----~el~~~~~~~~~~~~el~~~f~~~D~~~----~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~   71 (190)
T 2l2e_A            1 XGKSQSKLSQ-----DQLQDLVRSTRFDKKELQQWYKGFFKDC----PSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNV   71 (190)
T ss_dssp             -CCSSCCSCH-----HHHHHHHHHHCSCSHHHHHHHHHHHHHS----CCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHH
T ss_pred             CCcccccCCH-----HHHHHHHHhcCCCHHHHHHHHHHHHHhC----CCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHH
Confidence            7888888888     8999999999999998887777776432    379999999999987632  2345568899999


Q ss_pred             HhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhc--------CCCCCHHHHH
Q 030405           94 FDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTES--------GMNLSDDVIE  165 (178)
Q Consensus        94 ~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~--------~~~l~~~~~~  165 (178)
                      +|.+++|.|++.||..++..... ....+.++.+|+.+|.|++|.|+.+||..++..++...        +...+.+++.
T Consensus        72 ~D~d~~G~i~~~ef~~~~~~~~~-~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  150 (190)
T 2l2e_A           72 FDADKNGYIDFKEFICALSVTSR-GELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVN  150 (190)
T ss_dssp             HCSSSTTCEEHHHHHHHHTTSSC-SCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHH
T ss_pred             hcCCCCCeEeHHHHHHHHHHHcC-CCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHH
Confidence            99999999999999999987765 56778899999999999999999999999998853221        2345666665


Q ss_pred             HHHHHH
Q 030405          166 SIIDKV  171 (178)
Q Consensus       166 ~~~~~~  171 (178)
                      .+++.+
T Consensus       151 ~~f~~~  156 (190)
T 2l2e_A          151 KIFNMM  156 (190)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            554443

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=99.76  E-value=1.3e-17  Score=120.37  Aligned_cols=129  Identities=19%  Similarity=0.290  Sum_probs=104.7

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCh
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI  120 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~  120 (178)
                      .++++++..+...|..+|.+  ++|.|+..+|..++...+......+..+|+.+|.+++|.|+|+||+.++....  ...
T Consensus        45 ~l~~~~~~~l~~~F~~~D~d--~~G~i~~~El~~~l~~~g~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~--~~~  120 (191)
T 3k21_A           45 QSNDYDVEKLKSTFLVLDED--GKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFIAAALDRK--QLS  120 (191)
T ss_dssp             HCCCHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHHTTCCCCTTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG--GCC
T ss_pred             HCCHHHHHHHHHHHHHHCCC--CCCCCcHHHHHHHHHHcCCCcHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh--hcc
Confidence            37889999999999999999  99999999999999775544336678999999999999999999999875443  245


Q ss_pred             hHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhcc
Q 030405          121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQ  176 (178)
Q Consensus       121 ~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~D  176 (178)
                      .+.++.+|+.+|.|++|+|+.+||..++...  ..+..+++++.+ .++.+|..+|
T Consensus       121 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~--~~~~~l~~~~~~-~~~~~~~~~D  173 (191)
T 3k21_A          121 KKLIYCAFRVFDVDNDGEITTAELAHILYNG--NKKGNITQRDVN-RVKRMIRDVD  173 (191)
T ss_dssp             HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHS--SSCSCCCHHHHH-HHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHhc--CCCCCCCHhHHH-HHHHHHHHhc
Confidence            6889999999999999999999999999652  124567775432 2456666555

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=99.75  E-value=6.8e-18  Score=117.83  Aligned_cols=126  Identities=20%  Similarity=0.355  Sum_probs=106.9

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP  119 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~  119 (178)
                      .++++++..+...|..+|.+  ++|.|+..+|..++...+. .....+..+|+.+|.+++|.|+|+||+..+........
T Consensus        13 ~ls~~~~~~l~~~F~~~D~d--~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~   90 (162)
T 1top_A           13 FLSEEMIAEFKAAFDMFDAD--GGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDA   90 (162)
T ss_dssp             HSCHHHHHHHHHHHHTTTCS--CSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHHHCCC--CCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhcccc
Confidence            58999999999999999999  9999999999999877543 34567899999999999999999999998875532112


Q ss_pred             ---hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 030405          120 ---IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL  172 (178)
Q Consensus       120 ---~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~  172 (178)
                         ..+.++.+|+.+|.|++|.|+.+||..++..+    |.+++++++..++..+-
T Consensus        91 ~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~----g~~~~~~~~~~~~~~~d  142 (162)
T 1top_A           91 KGKSEEELANCFRIFDKNADGFIDIEELGEILRAT----GEHVTEEDIEDLMKDSD  142 (162)
T ss_dssp             HHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT----TCCCCHHHHHHHHHHHC
T ss_pred             ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh----CCCCCHHHHHHHHHHhC
Confidence               45678999999999999999999999998765    78899998887766553

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.75  E-value=4.3e-17  Score=120.35  Aligned_cols=120  Identities=17%  Similarity=0.278  Sum_probs=105.9

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS  118 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~  118 (178)
                      ..++.++++.++..|..+|.+  ++|.|+..+|..++...+. .....++.+|+.+|.+++|.|+|+||..++...    
T Consensus        43 ~~l~~~e~~~l~~~F~~~D~d--~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~----  116 (220)
T 3sjs_A           43 NTIPLDQYTRIYQWFMGVDRD--RSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM----  116 (220)
T ss_dssp             GGCCHHHHHHHHHHHHHHCTT--CCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH----
T ss_pred             hcCCHHHHHHHHHHHHHhCCC--CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH----
Confidence            458999999999999999999  9999999999998876443 345678999999999999999999999988764    


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL  172 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~  172 (178)
                         +.++.+|+.+|.|++|+|+.+||..++..+    |.++++++++.+++.+-
T Consensus       117 ---~~l~~~F~~~D~d~~G~I~~~El~~~l~~~----g~~~~~~~~~~l~~~~d  163 (220)
T 3sjs_A          117 ---ELAYNLFVMNARARSGTLEPHEILPALQQL----GFYINQRTSLLLHRLFA  163 (220)
T ss_dssp             ---HHHHHHHHHHCCSSTTEECHHHHHHHHHHH----TCCCCHHHHHHHHHHHC
T ss_pred             ---HHHHHHHHHHCCCCCCCCcHHHHHHHHHHh----CCCCCHHHHHHHHHHhc
Confidence               568999999999999999999999999887    88999999887776553

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=99.75  E-value=8.6e-17  Score=111.87  Aligned_cols=122  Identities=17%  Similarity=0.299  Sum_probs=100.4

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS  118 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~  118 (178)
                      ..+++.++..+...|..+|.+  ++|.|+..+|..++...+.. ....+..++.    +++|.|+|++|+.++.......
T Consensus        10 ~~l~~~~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~   83 (156)
T 1wdc_B           10 TKLPQKQIQEMKEAFSMIDVD--RDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGT   83 (156)
T ss_dssp             --CCHHHHHHHHHHHHHHCTT--CSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSC
T ss_pred             ccCCHHHHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCC
Confidence            348899999999999999999  99999999999998774433 3444555554    4689999999999998765545


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ...+.++.+|+.||.|++|+|+.+||..++..+    |.++++++++.++..+
T Consensus        84 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~----g~~~~~~~~~~~~~~~  132 (156)
T 1wdc_B           84 DSEETIRNAFAMFDEQETKKLNIEYIKDLLENM----GDNFNKDEMRMTFKEA  132 (156)
T ss_dssp             CCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHS----SSCCCHHHHHHHHHHC
T ss_pred             ChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHh----CCCCCHHHHHHHHHhc
Confidence            677889999999999999999999999999775    8889999887665543

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=99.74  E-value=1e-17  Score=114.80  Aligned_cols=120  Identities=21%  Similarity=0.413  Sum_probs=100.3

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCC-HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKE-SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI  120 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~-~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~  120 (178)
                      |++.+++.++..|..+|.+  ++|.|+..+|..++...+... ...+..++..    ++|.|+|++|+..+.........
T Consensus         1 ls~~~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~   74 (143)
T 3j04_B            1 FDQSQIQEFKEAFNMIDQN--RDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDP   74 (143)
T ss_dssp             CCHHHHHHHHHHHTTTCSS--CTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCC
T ss_pred             CCHHHHHHHHHHHHHhCCC--CCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCc
Confidence            5788999999999999999  999999999999997755443 3334444444    78999999999999876654567


Q ss_pred             hHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       121 ~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      .+.++.+|+.||.|++|+|+.+||..++..+    |.++++++++.++..+
T Consensus        75 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~----g~~~~~~~~~~~~~~~  121 (143)
T 3j04_B           75 EDVIRNAFACFDEEASGFIHEDHLRELLTTM----GDRFTDEEVDEMYREA  121 (143)
T ss_dssp             HHHHHHHHTTSCSSSCCCCCTTTHHHHHHTS----SSCCCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHc----CCCCCHHHHHHHHHHc
Confidence            7889999999999999999999999998765    8889999887666554

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=99.74  E-value=4.9e-17  Score=122.54  Aligned_cols=143  Identities=25%  Similarity=0.505  Sum_probs=114.8

Q ss_pred             CCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--CCCCHHHHHHHHHHHhcCCCCcccHHH
Q 030405           29 GLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--NKKESLFADRVFDLFDTKHNGILDFEE  106 (178)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~~~~~~~~~~lf~~~d~~~~g~i~~~e  106 (178)
                      ..+.+..+...++++..++..++..|+..+    ++|.|+..+|..++...  .......+..+|+.+|.+++|.|+++|
T Consensus        75 ~~e~l~~l~~~~~~s~~ei~~l~~~fd~~~----~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~E  150 (256)
T 2jul_A           75 QPEGLDQLQAQTKFTKKELQSLYRGFKNEC----PTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFED  150 (256)
T ss_dssp             -CTHHHHHHHHTTSCHHHHHHHHHHHHHHC----TTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHH
T ss_pred             CHHHHHHHHHHhCCCHHHHHHHHHHHHhhC----CCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHH
Confidence            347889999999999999999999998653    68999999999998763  234556789999999999999999999


Q ss_pred             HHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCC----CCCHHHHHHHHHHHHhhcc
Q 030405          107 FARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGM----NLSDDVIESIIDKVLSLIQ  176 (178)
Q Consensus       107 f~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~----~l~~~~~~~~~~~~~~~~D  176 (178)
                      |..++..+.. ....+.++.+|+.+|.|++|.|+.+||..++..++...|.    .+.+...+..++.+|..+|
T Consensus       151 f~~~l~~~~~-~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D  223 (256)
T 2jul_A          151 FVVGLSILLR-GTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMD  223 (256)
T ss_dssp             HHHHHHHHHS-CCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSC
T ss_pred             HHHHHHHHhc-cChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHC
Confidence            9999987765 5678899999999999999999999999999987654441    1222223344556666665

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=99.74  E-value=3.2e-17  Score=117.09  Aligned_cols=133  Identities=19%  Similarity=0.293  Sum_probs=108.4

Q ss_pred             CcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHH
Q 030405           31 EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARA  110 (178)
Q Consensus        31 ~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~  110 (178)
                      ..+..+......+++++..+...|..+|.+  ++|.|+..+|..++...+.. ...+..+|..+|.+++|.|+|+||+..
T Consensus        22 ~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d--~~G~i~~~El~~~l~~~g~~-~~~~~~~~~~~D~d~~g~i~~~Ef~~~   98 (180)
T 3mse_B           22 IIINIMAHELSVINNHIKYINELFYKLDTN--HNGSLSHREIYTVLASVGIK-KWDINRILQALDINDRGNITYTEFMAG   98 (180)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCTT--CSSSEEHHHHHHHHHHTTCC-HHHHHHHHHHHCTTCCSEECHHHHHHH
T ss_pred             HHHHHHHHHccCCHHHHHHHHHHHHHhCCC--CCCcCCHHHHHHHHHHcCCC-HHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence            334444444323478899999999999999  99999999999999876654 466899999999999999999999998


Q ss_pred             HHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhh
Q 030405          111 LSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSL  174 (178)
Q Consensus       111 ~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~  174 (178)
                      +.....  ...+.++.+|+.+|.|++|+|+.+||..++.      +.++++++++.++..+-..
T Consensus        99 ~~~~~~--~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~------~~~~~~~~~~~~~~~~d~~  154 (180)
T 3mse_B           99 CYRWKN--IESTFLKAAFNKIDKDEDGYISKSDIVSLVH------DKVLDNNDIDNFFLSVHSI  154 (180)
T ss_dssp             HSCCTT--C--CHHHHHHHHHCTTCSSCBCHHHHHHHTT------TSSCCHHHHHHHHHHHHTC
T ss_pred             HHhccc--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHc------CCCCCHHHHHHHHHHhhhc
Confidence            876543  3347899999999999999999999999984      4579999988877776554

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=99.73  E-value=2.8e-17  Score=118.25  Aligned_cols=124  Identities=15%  Similarity=0.149  Sum_probs=95.3

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHH-----HHHhcCCCCCHH------HHHHHHHHHhcCCCCcccHHHHHHH
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQ-----LALFKTNKKESL------FADRVFDLFDTKHNGILDFEEFARA  110 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~-----~~l~~~~~~~~~------~~~~lf~~~d~~~~g~i~~~ef~~~  110 (178)
                      +++.+++++...|..+|.+  ++|.|+..+|.     .++...+.....      .+..+|+.+|.+++|.|+|+||+.+
T Consensus        14 ~s~~~~~~l~~~F~~~D~d--~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~   91 (195)
T 1qv0_A           14 DNPRWIKRHKHMFDFLDIN--GNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDG   91 (195)
T ss_dssp             TCHHHHHHHHHHHHHHCTT--CSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHH
T ss_pred             CCHHHHHHHHHHHhHcCCC--CCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHH
Confidence            4899999999999999999  99999999999     556555544332      4788999999999999999999998


Q ss_pred             HHhhCCC------CChhHHHH----HHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          111 LSIFHPN------SPIDDKIE----FSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       111 ~~~~~~~------~~~~e~~~----~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      +......      ....+.++    .+|+.||.|++|+|+.+||..++..+    |.++++++++.++..+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----g~~~~~~~~~~~~~~~  158 (195)
T 1qv0_A           92 WKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKIS----GISPSQEDCEATFRHC  158 (195)
T ss_dssp             HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHH----SSCCCHHHHHHHHHHS
T ss_pred             HHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHh----CCCCCHHHHHHHHHHh
Confidence            7654210      01112344    89999999999999999999999887    7889998877665543

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=99.73  E-value=1.4e-16  Score=111.84  Aligned_cols=122  Identities=19%  Similarity=0.326  Sum_probs=102.2

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC--CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK--KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPN  117 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~--~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~  117 (178)
                      ..+++.++..+...|..+|.+  ++|.|+..+|..++...+.  .....+..++...    +|.|+|.||+.++......
T Consensus        17 ~~l~~~~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~   90 (166)
T 2mys_B           17 SMFDETEIEDFKEAFTVIDQN--ADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKG   90 (166)
T ss_pred             hhCCHHHHHHHHHHHHHHCCC--CCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhcc
Confidence            358899999999999999999  9999999999999977554  3445566677653    7899999999998876544


Q ss_pred             CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          118 SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       118 ~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ....+.++.+|+.||.|++|+|+.+||..++..+    |.++++++++.++..+
T Consensus        91 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~----g~~~~~~~~~~~~~~~  140 (166)
T 2mys_B           91 ADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTG----GGRFTPEEIKNMWAAF  140 (166)
T ss_pred             CCcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHc----CCCCCHHHHHHHHHhc
Confidence            5567889999999999999999999999999876    7889999887766554

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=99.73  E-value=3.1e-18  Score=118.46  Aligned_cols=123  Identities=16%  Similarity=0.272  Sum_probs=95.6

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcC--CCCcccHHHHHHHHHhhCCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTK--HNGILDFEEFARALSIFHPN  117 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~--~~g~i~~~ef~~~~~~~~~~  117 (178)
                      .+++++++.++..|..+|.+  ++|.|+..+|..++...+. .....+..+|..+|.+  ++|.|+|+||+.++......
T Consensus         3 ~ls~~~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~   80 (151)
T 1w7j_B            3 EFNKDQLEEFKEAFELFDRV--GDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKN   80 (151)
T ss_dssp             --------CHHHHHHHHCCS--SSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC-
T ss_pred             CCCHHHHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhcc
Confidence            47888999999999999999  9999999999999877543 3456689999999998  99999999999999876531


Q ss_pred             --CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHH
Q 030405          118 --SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIID  169 (178)
Q Consensus       118 --~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~  169 (178)
                        ....+.++.+|+.+|.|++|+|+.+||+.++..+    |.++++++++.++.
T Consensus        81 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~----g~~~~~~~~~~~~~  130 (151)
T 1w7j_B           81 RGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTL----GEKMTEEEVETVLA  130 (151)
T ss_dssp             -------CCHHHHHTTCTTSSSEEEHHHHHHHHHHS----SSCCCHHHHHHHHT
T ss_pred             CCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc----CCCCCHHHHHHHHH
Confidence              1234567889999999999999999999999776    88899988776654

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=99.72  E-value=5.5e-17  Score=116.22  Aligned_cols=124  Identities=16%  Similarity=0.144  Sum_probs=99.5

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHH-----HHHhcCCCCCHH------HHHHHHHHHhcCCCCcccHHHHHHH
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQ-----LALFKTNKKESL------FADRVFDLFDTKHNGILDFEEFARA  110 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~-----~~l~~~~~~~~~------~~~~lf~~~d~~~~g~i~~~ef~~~  110 (178)
                      +++++++++...|..+|.+  ++|.|+..+|.     .++...+.....      .+..+|+.+|.+++|.|+|+||+..
T Consensus        10 ~~~~~~~~l~~~F~~~D~d--~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~   87 (191)
T 1uhk_A           10 DNPRWIGRHKHMFNFLDVN--HNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEG   87 (191)
T ss_dssp             TCHHHHHHHHHHHHHHCTT--CCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHH
T ss_pred             CCHHHHHHHHHHHhhccCC--CCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHH
Confidence            4788999999999999999  99999999999     677665554433      4788999999999999999999998


Q ss_pred             HHhhCCC------CChhHHHH----HHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          111 LSIFHPN------SPIDDKIE----FSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       111 ~~~~~~~------~~~~e~~~----~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      +......      ....+.++    .+|+.+|.|++|+|+.+||..++..+    |.+++++++..++..+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~----g~~~~~~~~~~~~~~~  154 (191)
T 1uhk_A           88 WKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAA----GIIQSSEDCEETFRVC  154 (191)
T ss_dssp             HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH----TSCCSHHHHHHHHHHS
T ss_pred             HHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHh----CCCCCHHHHHHHHHHh
Confidence            7654210      01112343    89999999999999999999999876    7788998877665543

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=99.72  E-value=1.6e-16  Score=112.21  Aligned_cols=122  Identities=15%  Similarity=0.153  Sum_probs=98.1

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHH----HHhcCCCC-CHHHHH-----------HHHHHHhcCCCCcccHH
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQL----ALFKTNKK-ESLFAD-----------RVFDLFDTKHNGILDFE  105 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~----~l~~~~~~-~~~~~~-----------~lf~~~d~~~~g~i~~~  105 (178)
                      +++.+++++...|..+|.+  ++|.|+..+|..    ++...+.. ....+.           .+|+.+|.+++|.|+++
T Consensus         1 ls~~~~~~l~~~F~~~D~d--~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~   78 (176)
T 1nya_A            1 TTAIASDRLKKRFDRWDFD--GNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEE   78 (176)
T ss_dssp             CCSHHHHHHHHHHHHCCSS--CCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHH
T ss_pred             CcHHHHHHHHHHHHHHcCC--CCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHH
Confidence            4667899999999999999  999999999998    45443322 223333           89999999999999999


Q ss_pred             HHHHHHHhhCCCCCh-------hHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          106 EFARALSIFHPNSPI-------DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       106 ef~~~~~~~~~~~~~-------~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ||..++.........       .+.++.+|+.+|.|++|.|+.+||..++..+    |  ++++++..++..+
T Consensus        79 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~----g--~~~~~~~~~~~~~  145 (176)
T 1nya_A           79 QFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTAL----G--MSKAEAAEAFNQV  145 (176)
T ss_dssp             HHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHT----T--CCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHh----C--CCHHHHHHHHHHh
Confidence            999998876543332       3568999999999999999999999998775    5  8888877666554

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.72  E-value=1e-17  Score=121.56  Aligned_cols=126  Identities=20%  Similarity=0.266  Sum_probs=93.1

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP  119 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~  119 (178)
                      .++.+++..+...|..+|.+  ++|.|+..+|..++...+. .....+..+|+.+|.+++|.|+|+||+..+..... ..
T Consensus        50 ~l~~~e~~~l~~~F~~~D~d--~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~-~~  126 (197)
T 3pm8_A           50 HLCDVEINNLRNIFIALDVD--NSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQT-YL  126 (197)
T ss_dssp             HCCHHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHHH-HC
T ss_pred             HCCHHHHHHHHHHHHHHCCC--CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHh-hh
Confidence            37889999999999999999  9999999999999876443 34566899999999999999999999987755433 34


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ..+.++.+|+.||.|++|+|+.+||..++..+.  .+..+++++++.++..+
T Consensus       127 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~--~~~~~~~~~~~~l~~~~  176 (197)
T 3pm8_A          127 KKEVCLIPFKFFDIDGNGKISVEELKRIFGRDD--IENPLIDKAIDSLLQEV  176 (197)
T ss_dssp             SHHHHHHHHHHHCTTCSSEECHHHHHHHHC------CCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcc--cCCCCCHHHHHHHHHHH
Confidence            567899999999999999999999999986541  13446666666555544

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=99.71  E-value=3.7e-17  Score=119.12  Aligned_cols=124  Identities=13%  Similarity=0.117  Sum_probs=94.3

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC---CCCHHHHHHHH-------HHHhcCCCCcccHHHHHH
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN---KKESLFADRVF-------DLFDTKHNGILDFEEFAR  109 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~---~~~~~~~~~lf-------~~~d~~~~g~i~~~ef~~  109 (178)
                      ..++++++..+...|..+|.+  ++|.|+..+|..++...+   ......+..++       +.+|.+++|.|+|+||+.
T Consensus        28 ~~l~~~~~~~l~~~F~~~D~d--~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~  105 (208)
T 2hpk_A           28 EDLHPKMLSRLYKRFDTFDLD--SDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVE  105 (208)
T ss_dssp             --------CHHHHHHHHHCTT--CSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHH
T ss_pred             HHcCHHHHHHHHHHHHHhCCC--CCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence            457888999999999999999  999999999999886633   34456677888       999999999999999999


Q ss_pred             HHH---------hhCCCCChhHH-HHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          110 ALS---------IFHPNSPIDDK-IEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       110 ~~~---------~~~~~~~~~e~-~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ++.         .+.......+. ++.+|+.+|.|++|.|+.+||..++..+    |  +++++++.++..+
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~----g--~~~~~~~~~~~~~  171 (208)
T 2hpk_A          106 ANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAF----D--VPQEAAYTFFEKA  171 (208)
T ss_dssp             HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHT----T--SCTTHHHHHHHHH
T ss_pred             HHHHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh----C--cCHHHHHHHHHHh
Confidence            886         44332333444 7899999999999999999999999765    5  7777766655554

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.71  E-value=5.2e-18  Score=116.91  Aligned_cols=118  Identities=13%  Similarity=0.269  Sum_probs=95.6

Q ss_pred             HHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHH-hcCCCCcccHHHHHHHHHhh--C---CCC
Q 030405           46 EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLF-DTKHNGILDFEEFARALSIF--H---PNS  118 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~-d~~~~g~i~~~ef~~~~~~~--~---~~~  118 (178)
                      +++.+...|..+|.+  ++|.|+..+|..++...+.. ....+..+|..+ |.+++|.|+|.||+..+...  .   ...
T Consensus         2 ~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~   79 (148)
T 1m45_A            2 ATRANKDIFTLFDKK--GQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTK   79 (148)
T ss_dssp             -CCCCTTCHHHHCTT--CCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGC
T ss_pred             hHHHHHHHHHHHCCC--CCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhcccccc
Confidence            345577889999999  99999999999998775433 456789999999 99999999999999988766  1   224


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIID  169 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~  169 (178)
                      ...+.++.+|+.+|.|++|.|+.+||..++..+    |.+++++++..++.
T Consensus        80 ~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~----g~~~~~~~~~~~~~  126 (148)
T 1m45_A           80 AKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGL----GEKLTDAEVDELLK  126 (148)
T ss_dssp             CCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHS----TTCCCHHHHHHHHT
T ss_pred             ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc----CCCCCHHHHHHHHH
Confidence            566889999999999999999999999999776    88899988765544

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=99.70  E-value=3.4e-16  Score=126.03  Aligned_cols=126  Identities=19%  Similarity=0.379  Sum_probs=107.4

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP  119 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~  119 (178)
                      .++.++++.+...|..+|.+  ++|.|+..||..++...+. .....++.+|+.+|.+++|.|+|+||+.++........
T Consensus       305 ~ls~eei~el~~~F~~fD~D--~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~  382 (450)
T 3sg6_A          305 QLTEEQIAEFKEAFSLFDKD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD  382 (450)
T ss_dssp             CCCHHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------
T ss_pred             cCCHHHHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccc
Confidence            57889999999999999999  9999999999999977443 34566899999999999999999999999987655455


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL  172 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~  172 (178)
                      ..+.++.+|+.+|.|++|.|+.+||+.+|..+    |..+++++++.++..+-
T Consensus       383 ~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~l----G~~ls~eei~~Lf~~~D  431 (450)
T 3sg6_A          383 SEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVDEMIREAD  431 (450)
T ss_dssp             CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH----TCCCCHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHh----CCCCCHHHHHHHHHHhC
Confidence            67889999999999999999999999999887    88999999887776654

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=99.70  E-value=5.4e-17  Score=121.79  Aligned_cols=134  Identities=18%  Similarity=0.297  Sum_probs=111.0

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-------CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-------KESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-------~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      .+++.+++.+...|..+|.+  ++|.|+..+|..++...+.       .....+..+|..+|.+++|.|+|+||...+..
T Consensus         9 ~l~~~~~~~l~~~F~~~D~d--~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~   86 (263)
T 2f33_A            9 QSSLITASQFFEIWLHFDAD--GSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPT   86 (263)
T ss_dssp             TTSCCCHHHHHHHHHHHCTT--CSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTS
T ss_pred             hcCcccHHHHHHHHHHhCCC--CCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence            35666677899999999999  9999999999998865321       22256789999999999999999999998753


Q ss_pred             h---------CCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhccC
Q 030405          114 F---------HPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQL  177 (178)
Q Consensus       114 ~---------~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~D~  177 (178)
                      .         .. ....+.++.+|+.+|.|++|.|+.+||..++..+....|.++++.++..+++.+|..+|.
T Consensus        87 ~~~~~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~  158 (263)
T 2f33_A           87 EENFLLLFRCQQ-LKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDS  158 (263)
T ss_dssp             CTTHHHHHGGGT-SSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCS
T ss_pred             hhhHHHHHHHhh-ccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCC
Confidence            2         22 456678999999999999999999999999988755557889999999988888888773

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=99.70  E-value=1.5e-16  Score=115.26  Aligned_cols=120  Identities=18%  Similarity=0.285  Sum_probs=100.8

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS  118 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~  118 (178)
                      ..++..++..|+..|..+|.+  ++|.|+..+|..++...+.. ....+..++..+    +|.|+|.+|+.++.......
T Consensus        49 ~~ls~~~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~  122 (196)
T 3dtp_E           49 AMFTQHQVQEFKEAFQLIDQD--KDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGT  122 (196)
T ss_dssp             CSSCTTTHHHHHHHHHHHCCS--CSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSS
T ss_pred             hhCCHHHHHHHHHHHHHHCCC--CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCC
Confidence            357889999999999999999  99999999999999875543 344566666665    78999999999998766545


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK  170 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~  170 (178)
                      ...+.+..+|+.||.|++|+|+.+||..+| .+    |..++++++..++..
T Consensus       123 ~~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~----g~~~~~~~~~~l~~~  169 (196)
T 3dtp_E          123 DEEDVIVNAFNLFDEGDGKCKEETLKRSLT-TW----GEKFSQDEVDQALSE  169 (196)
T ss_dssp             CCHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HS----SSCCCHHHHHHHHHS
T ss_pred             CcHHHHHHHHHHHCCCCCCcCcHHHHHHHH-Hc----CCCCCHHHHHHHHHH
Confidence            667889999999999999999999999999 75    888999887765543

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=99.70  E-value=1.7e-16  Score=115.34  Aligned_cols=125  Identities=22%  Similarity=0.372  Sum_probs=96.3

Q ss_pred             hcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHH
Q 030405           16 VNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLF   94 (178)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~   94 (178)
                      ||+..+.+++        .++...++++..+   +...|..+|.+. ++|.|+..+|..++...+. .....++.+|+.+
T Consensus         1 MG~~~s~~~~--------~~l~~~t~~~~~e---l~~~f~~~D~~~-~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~   68 (204)
T 1jba_A            1 MGQQFSWEEA--------EENGAVGAADAAQ---LQEWYKKFLEEC-PSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAF   68 (204)
T ss_dssp             -CCCSSCHHH--------HHSSSCCHHHHHH---HHHHHHHHHSSS-TTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHH
T ss_pred             CCcccccccH--------HHHHHhcCCCHHH---HHHHHHHHHhhC-CCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence            5666555432        3444444455554   555666666540 4899999999999987553 4456789999999


Q ss_pred             hcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh
Q 030405           95 DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT  153 (178)
Q Consensus        95 d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~  153 (178)
                      |.+++|.|+++||..++..+.. ....+.++.+|+.+|.|++|.|+.+||..++..+..
T Consensus        69 D~d~~G~i~~~Ef~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~  126 (204)
T 1jba_A           69 DTNGDNTIDFLEYVAALNLVLR-GTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYK  126 (204)
T ss_dssp             CCSSSSEECHHHHHHHHHHHSS-CCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHH
T ss_pred             cCCCCCeEeHHHHHHHHHHHcc-CCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence            9999999999999999988776 567788999999999999999999999999988743

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.69  E-value=1.6e-17  Score=119.77  Aligned_cols=122  Identities=25%  Similarity=0.391  Sum_probs=100.4

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP  119 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~  119 (178)
                      .+++++++.+...|..+|.+  ++|.|+..+|..++...+. .....+..+|+.+|.+++|.|+|+||+..+..+.. ..
T Consensus         3 ~ls~~~~~~l~~~F~~~D~d--~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~-~~   79 (188)
T 1s6i_A            3 RLSEEEIGGLKELFKMIDTD--NSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNK-LE   79 (188)
T ss_dssp             SSSCTTTCSHHHHHHTTSSS--SSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSS-SC
T ss_pred             CCCHHHHHHHHHHHHHHCCC--CCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhc-cC
Confidence            46777788899999999999  9999999999999877543 34566899999999999999999999998876543 34


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ..+.++.+|+.+|.|++|+|+.+||..++..+    |  +++++++.++..+
T Consensus        80 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~----g--~~~~~~~~~~~~~  125 (188)
T 1s6i_A           80 REENLVSAFSYFDKDGSGYITLDEIQQACKDF----G--LDDIHIDDMIKEI  125 (188)
T ss_dssp             CCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTT----T--CCTTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc----C--CCHHHHHHHHHHH
Confidence            45678999999999999999999999998654    3  6666666555544

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=99.69  E-value=4.9e-16  Score=106.87  Aligned_cols=117  Identities=15%  Similarity=0.235  Sum_probs=100.9

Q ss_pred             HHHHHHHHHHHhhcccCCC-CCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhH
Q 030405           45 SEIEALYELFKKISSAVID-DGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDD  122 (178)
Q Consensus        45 ~~i~~l~~~F~~~d~~~~~-~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e  122 (178)
                      +++..++..|..+|.+  + +|.|+..+|..++...+. .....+..++..+|.+    |+|++|+.++..........+
T Consensus        11 ~~~~~l~~~F~~~D~d--~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~   84 (146)
T 2qac_A           11 EEKVDESDVRIYFNEK--SSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVE   84 (146)
T ss_dssp             HHHSCHHHHHHHHHHH--CBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHH
T ss_pred             HHHHHHHHHHHHhCcc--CCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHH
Confidence            4567789999999999  9 999999999999877543 3456688999999886    999999999987655456678


Q ss_pred             HHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          123 KIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       123 ~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      .++.+|+.||.|++|+|+.+||..++..+    |.++++++++.++..+
T Consensus        85 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~----g~~~~~~~~~~~~~~~  129 (146)
T 2qac_A           85 ELIKMFAHFDNNCTGYLTKSQMKNILTTW----GDALTDQEAIDALNAF  129 (146)
T ss_dssp             HHHHHHHTTCTTCSSEEEHHHHHHHHHHS----SSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHh----CCCCCHHHHHHHHHHc
Confidence            89999999999999999999999999775    8889999999888776

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=99.69  E-value=4.7e-16  Score=110.11  Aligned_cols=112  Identities=22%  Similarity=0.352  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC---------CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC
Q 030405           46 EIEALYELFKKISSAVIDDGLINKEEFQLALFKT---------NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHP  116 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~---------~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~  116 (178)
                      ++++++..|..+| +  ++|.|+..+|..++...         .......++.+|+.+|.+++|.|+|+||...+...  
T Consensus         2 ~~~~l~~~F~~~D-d--~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~--   76 (173)
T 1alv_A            2 EVRQFRRLFAQLA-G--DDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI--   76 (173)
T ss_dssp             HHHHHHHHHHHHH-G--GGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH--
T ss_pred             chhHHHHHHHHHh-C--CCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH--
Confidence            5778999999999 8  99999999999988663         23445678999999999999999999999988643  


Q ss_pred             CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          117 NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       117 ~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                           +.++.+|+.+|.|++|.|+.+|+..++..+    |.++++++++.++..+
T Consensus        77 -----~~~~~~F~~~D~d~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~~~~  122 (173)
T 1alv_A           77 -----KKWQAIYKQFDVDRSGTIGSSELPGAFEAA----GFHLNEHLYSMIIRRY  122 (173)
T ss_dssp             -----HHHHHHHHHHCTTCCSSBCTTTHHHHHHHH----TCCCCHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHCCCCCCCCCHHHHHHHHHHc----CCCCCHHHHHHHHHHh
Confidence                 568999999999999999999999999887    7889998888777665

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=99.68  E-value=1.3e-16  Score=115.65  Aligned_cols=127  Identities=23%  Similarity=0.343  Sum_probs=93.6

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI  120 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~  120 (178)
                      ....++..+...|..+|.+  ++|.|+..+|..++...+. .....+..+|+.+|.+++|.|+|+||...+..... ...
T Consensus        31 ~~~~~~~~l~~~F~~~D~d--~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~-~~~  107 (204)
T 3e3r_A           31 RGASGIQGLARFFRQLDRD--GSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMS-QAR  107 (204)
T ss_dssp             ---------CHHHHHHCTT--CCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCC-HHH
T ss_pred             cCchhHHHHHHHHHHHccC--CCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcC-chH
Confidence            3456788999999999999  9999999999999987543 34567899999999999999999999998876544 344


Q ss_pred             hHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh---hcCCCCCHHHHHHHHHHH
Q 030405          121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT---ESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       121 ~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~---~~~~~l~~~~~~~~~~~~  171 (178)
                      .+.++.+|+.+|.|++|.|+.+||..++..+..   ..|...++++++.+++.+
T Consensus       108 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (204)
T 3e3r_A          108 EAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNF  161 (204)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHh
Confidence            567999999999999999999999999863210   124445555555544443

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=99.68  E-value=4e-16  Score=111.95  Aligned_cols=123  Identities=15%  Similarity=0.272  Sum_probs=97.4

Q ss_pred             CCCHHHHHHHHHHHHhh-cccCCCCCcccHHHHHHHHhcC----CC-CCHHHHHHHH-----------HHHhcCCCCccc
Q 030405           41 VFSVSEIEALYELFKKI-SSAVIDDGLINKEEFQLALFKT----NK-KESLFADRVF-----------DLFDTKHNGILD  103 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~-d~~~~~~g~i~~~ef~~~l~~~----~~-~~~~~~~~lf-----------~~~d~~~~g~i~  103 (178)
                      .+++.+++++...|..+ |.+  ++|.|+..+|..++...    +. .....+..++           +.+|.+++|.|+
T Consensus         5 ~ls~~~~~~l~~~F~~~~D~d--~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~   82 (191)
T 2ccm_A            5 QLSDFQRNKILRVFNTFYDCN--HDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVT   82 (191)
T ss_dssp             CCCHHHHHHHHHHHHHHTCTT--CSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEE
T ss_pred             hccHHHHHHHHHhccccccCC--CCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEC
Confidence            47888999999999999 999  99999999999987654    32 2334456666           999999999999


Q ss_pred             HHHHHHHHHhhCC--------CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          104 FEEFARALSIFHP--------NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       104 ~~ef~~~~~~~~~--------~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ++||..++.....        .....+.++.+|+.+|.|++|.|+.+||..++..+    |  ++++++..+++.+
T Consensus        83 ~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~----g--~~~~~~~~~~~~~  152 (191)
T 2ccm_A           83 KEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSY----G--IPKSDCDAAFDTL  152 (191)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTT----T--CCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh----C--CCHHHHHHHHHHh
Confidence            9999998876521        11234678999999999999999999999998654    3  6776666555544

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.68  E-value=2.3e-16  Score=108.02  Aligned_cols=116  Identities=18%  Similarity=0.259  Sum_probs=94.7

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC-CCCC
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFH-PNSP  119 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~-~~~~  119 (178)
                      +++++   +...|..+|.+  ++|.|+..+|..++...+.. ....+..+|..   +++|.|+|+||+..+.... ....
T Consensus         2 ls~~e---l~~~F~~~D~d--~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~   73 (145)
T 2bl0_B            2 ASADQ---IQECFQIFDKD--NDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTE   73 (145)
T ss_dssp             CCHHH---HHHHHHHHCTT--CSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGG
T ss_pred             CCHHH---HHHHHHHhCCC--CcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcc
Confidence            56666   88899999999  99999999999998775443 44556777777   7789999999999987654 3244


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIID  169 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~  169 (178)
                      ..+.++.+|+.+|.|++|.|+.+||..++..+    |.++++++++.++.
T Consensus        74 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~----g~~~~~~~~~~~~~  119 (145)
T 2bl0_B           74 QSKEMLDAFRALDKEGNGTIQEAELRQLLLNL----GDALTSSEVEELMK  119 (145)
T ss_dssp             GHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHS----SSCCCHHHHHHHHT
T ss_pred             cHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHc----CCCCCHHHHHHHHH
Confidence            56789999999999999999999999999776    77899888765543

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=99.68  E-value=1.8e-16  Score=112.69  Aligned_cols=108  Identities=13%  Similarity=0.189  Sum_probs=87.9

Q ss_pred             CCCHHHHHHHHHHHHhh-cccCCCCCcccHHHHHHHHhcCC-----CCCHHHHH-----------HHHHHHhcCCCCccc
Q 030405           41 VFSVSEIEALYELFKKI-SSAVIDDGLINKEEFQLALFKTN-----KKESLFAD-----------RVFDLFDTKHNGILD  103 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~-d~~~~~~g~i~~~ef~~~l~~~~-----~~~~~~~~-----------~lf~~~d~~~~g~i~  103 (178)
                      ++++.+++++...|..+ |.+  ++|.|+..+|..++....     ......+.           .+|+.+|.+++|.|+
T Consensus         1 gls~~~~~~l~~~F~~~~D~d--~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~   78 (185)
T 2sas_A            1 GLNDFQKQKIKFTFDFFLDMN--HDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVS   78 (185)
T ss_dssp             CCCHHHHHHHHHHHHHHTCTT--CSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEE
T ss_pred             CcCHHHHHHHHHHHHHheeCC--CCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEc
Confidence            36788899999999999 999  999999999988875532     23333344           349999999999999


Q ss_pred             HHHHHHHHHhhCCC--------CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          104 FEEFARALSIFHPN--------SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       104 ~~ef~~~~~~~~~~--------~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ++||..++......        ....+.++.+|+.+|.|++|.|+.+||..++..
T Consensus        79 ~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~  133 (185)
T 2sas_A           79 WEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKN  133 (185)
T ss_dssp             HHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTS
T ss_pred             HHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH
Confidence            99999988765321        224477899999999999999999999999854

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=99.68  E-value=1.1e-16  Score=112.35  Aligned_cols=122  Identities=25%  Similarity=0.372  Sum_probs=95.2

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP  119 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~  119 (178)
                      .++++++..+...|..+|.+  ++|.|+..+|..++...+. .....+..+|+.+|.+++|.|+|.||...+..... ..
T Consensus        20 ~l~~~~~~~l~~~F~~~D~~--~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-~~   96 (166)
T 2aao_A           20 SLSEEEIAGLKEMFNMIDAD--KSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNK-IE   96 (166)
T ss_dssp             HSCHHHHHHHHHHHHHHCTT--CCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHH-HH
T ss_pred             hCCHHHHHHHHHHHHHhCCC--CCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhh-cc
Confidence            48999999999999999999  9999999999999877443 34566899999999999999999999998754322 23


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ..+.++.+|+.+|.|++|.|+.+||..++..+    |  ++++++..++..+
T Consensus        97 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~----~--~~~~~~~~~~~~~  142 (166)
T 2aao_A           97 REDHLFAAFTYFDKDGSGYITPDELQQACEEF----G--VEDVRIEELMRDV  142 (166)
T ss_dssp             TTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC--------------CCHHHHH
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc----C--CCHHHHHHHHHHh
Confidence            34679999999999999999999999998554    3  5555555554443

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=99.67  E-value=2.8e-16  Score=107.27  Aligned_cols=115  Identities=17%  Similarity=0.212  Sum_probs=92.8

Q ss_pred             HHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC--ChhHH
Q 030405           47 IEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS--PIDDK  123 (178)
Q Consensus        47 i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~--~~~e~  123 (178)
                      ++.++..|..+|.+  ++|.|+..+|..++...+.. ....+..++.    +++|.|+|+||...+.......  ...+.
T Consensus         4 ~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~   77 (140)
T 1ggw_A            4 DSPYKQAFSLFDRH--GTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEE   77 (140)
T ss_dssp             CTTTHHHHHHTCSS--SSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHH
T ss_pred             HHHHHHHHHHHCCC--CCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHH
Confidence            34688899999999  99999999999998775443 3444555555    7889999999999987765322  22478


Q ss_pred             HHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          124 IEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       124 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ++.+|+.+|.|++|+|+.+||..++..+    |.++++++++.++..+
T Consensus        78 ~~~~F~~~D~d~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~~~~  121 (140)
T 1ggw_A           78 FVKGFQVFDKDATGMIGVGELRYVLTSL----GEKLSNEEMDELLKGV  121 (140)
T ss_dssp             HHHHHHTTCSSCSSCCCHHHHHHHHHHH----HSCSCHHHHHHHHHHT
T ss_pred             HHHHHHHhCCCCCCcEeHHHHHHHHHHc----CCCCCHHHHHHHHHhc
Confidence            9999999999999999999999999887    7789998887766554

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=99.67  E-value=2.7e-16  Score=118.49  Aligned_cols=133  Identities=15%  Similarity=0.293  Sum_probs=107.8

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHh----cCCC---CCHHHH----HHHHHHHhcCCCCcccHHHHHHH
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALF----KTNK---KESLFA----DRVFDLFDTKHNGILDFEEFARA  110 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~----~~~~---~~~~~~----~~lf~~~d~~~~g~i~~~ef~~~  110 (178)
                      ++..+.+++...|..+|.+  ++|.|+..+|..++.    ..+.   .....+    ..+|..+|.+++|.|+|+||...
T Consensus         5 ~~~~~~~~l~~~F~~~D~d--~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~   82 (272)
T 2be4_A            5 FANLDAAGFLQIWQHFDAD--DNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANM   82 (272)
T ss_dssp             CCCCCHHHHHHHHHHHCTT--CCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHH
T ss_pred             HHhcCHHHHHHHHHHhcCC--CCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHH
Confidence            4444556788899999999  999999999999887    4333   223333    34678999999999999999998


Q ss_pred             -----------HHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhccC
Q 030405          111 -----------LSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQL  177 (178)
Q Consensus       111 -----------~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~D~  177 (178)
                                 +..... ....+.++.+|+.+|.|++|.|+.+||..++..+....|.+++++++..+++.+|..+|.
T Consensus        83 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~  159 (272)
T 2be4_A           83 ILPQEENFLLIFRREAP-LDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDK  159 (272)
T ss_dssp             HSCHHHHHHHHHHHHSC-CCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCS
T ss_pred             HhhhhHHHHHHHhhccC-cccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcc
Confidence                       334433 456788999999999999999999999999998866667889999999988999988773

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=99.67  E-value=3.2e-17  Score=120.78  Aligned_cols=125  Identities=17%  Similarity=0.170  Sum_probs=93.3

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-CCCCC-H----HHHHHHHHHH-----hcCCCCcccHHHHH
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKE-S----LFADRVFDLF-----DTKHNGILDFEEFA  108 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~~~-~----~~~~~lf~~~-----d~~~~g~i~~~ef~  108 (178)
                      ..+++++++.+...|..+|.+  ++|.|+..+|..++.. .+... .    ..+..+|..+     +.+++|.|+|.||+
T Consensus        40 ~~ls~~~~~~l~~~F~~~D~d--~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~  117 (219)
T 3cs1_A           40 REKTAEAKQRRIELFKKFDKN--ETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFL  117 (219)
T ss_dssp             CSSSHHHHHHHHHHHHHHCTT--CSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHH
T ss_pred             ccCCHHHHHHHHHHHHHhCCC--CCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHH
Confidence            468999999999999999999  9999999999988754 23221 1    1223333322     23778999999999


Q ss_pred             HHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHH
Q 030405          109 RALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGM-NLSDDVIESIIDKV  171 (178)
Q Consensus       109 ~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~-~l~~~~~~~~~~~~  171 (178)
                      .++..... ....+.++.+|+.||.|++|+|+.+||..++..+    |. .+++++++.++..+
T Consensus       118 ~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~----g~~~~~~~e~~~l~~~~  176 (219)
T 3cs1_A          118 EFRLMLCY-IYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKL----EAWGAKVEDPAALFKEL  176 (219)
T ss_dssp             HHHHHHHH-HHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHH----HHHTCCCSCHHHHHHHH
T ss_pred             HHHHHHhc-cchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh----cccCCCHHHHHHHHHHh
Confidence            88654432 2345679999999999999999999999999876    43 56666666555443

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=99.67  E-value=2.4e-15  Score=108.70  Aligned_cols=135  Identities=17%  Similarity=0.177  Sum_probs=107.1

Q ss_pred             cchhhhhhhcc-cCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHH
Q 030405            8 LKHFCVVVVNC-CDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESL   85 (178)
Q Consensus         8 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~   85 (178)
                      +..++..+... .++.++.     ..+..+....+++......+...|..+|.+  ++|.|+..+|..++.... .....
T Consensus        16 l~~~f~~fd~~~~~G~i~~-----~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d--~~G~I~~~Ef~~~~~~~~~~~~~~   88 (198)
T 2r2i_A           16 CHQWYKKFMTECPSGQLTL-----YEFKQFFGLKNLSPSANKYVEQMFETFDFN--KDGYIDFMEYVAALSLVLKGKVDQ   88 (198)
T ss_dssp             HHHHHHHHHHHCTTSEECH-----HHHHHHHTCCSCCHHHHHHHHHHHHHHCTT--CSSCEEHHHHHHHHHHHSSCCHHH
T ss_pred             HHHHHHHHHHhCCCCcCCH-----HHHHHHHHHhCCCcchHHHHHHHHHHHCCC--CCCeEcHHHHHHHHHHHccCchHH
Confidence            34555556555 5677777     888888888888877777888999999998  999999999998886633 23345


Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhC------CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFH------PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~------~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .+..+|+.+|.+++|.|+++||..++..+.      ......+.+..+|+.+|.|++|.|+++||..++.
T Consensus        89 ~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~  158 (198)
T 2r2i_A           89 KLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ  158 (198)
T ss_dssp             HHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            678899999999999999999999988764      2233456689999999999999999999998874

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=99.67  E-value=1.5e-16  Score=114.04  Aligned_cols=129  Identities=16%  Similarity=0.291  Sum_probs=103.3

Q ss_pred             HHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC-----------C-CCCHHHHHHHHHHHhcCCCC
Q 030405           33 PEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT-----------N-KKESLFADRVFDLFDTKHNG  100 (178)
Q Consensus        33 ~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~-----------~-~~~~~~~~~lf~~~d~~~~g  100 (178)
                      +..+.... ++++++..+...|..+|.+  ++|.|+..+|..++...           + ......+..+|+.+|.+++|
T Consensus        26 l~~~~~~~-~~~~~~~~l~~~F~~~D~d--~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g  102 (191)
T 3khe_A           26 MLFMGSKL-TTLEETKELTQIFRQLDNN--GDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNG  102 (191)
T ss_dssp             HHHHHHHS-SCTTTTHHHHHHHHHHCTT--CSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSS
T ss_pred             HHHHHHHH-cCHHHHHHHHHHHHHHcCC--CCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCC
Confidence            33344332 4788899999999999999  99999999999988643           1 12244578999999999999


Q ss_pred             cccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          101 ILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       101 ~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      .|+|+||+.++..... ....+.++.+|+.+|.|++|.|+.+||..++.      +.+++++++..++..+
T Consensus       103 ~i~~~ef~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~------~~~~~~~~~~~~~~~~  166 (191)
T 3khe_A          103 YIEYSEFVTVCMDKQL-LLSRERLLAAFQQFDSDGSGKITNEELGRLFG------VTEVDDETWHQVLQEC  166 (191)
T ss_dssp             SEEHHHHHHHHSCHHH-HCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT------SSCCCHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHhcc-cchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc------cCCCCHHHHHHHHHHh
Confidence            9999999998754433 34567899999999999999999999999974      5678888877666554

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=99.67  E-value=1.5e-15  Score=107.30  Aligned_cols=113  Identities=24%  Similarity=0.457  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHH
Q 030405           46 EIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDK  123 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~  123 (178)
                      +.+++...|..+|.+  ++|.|+..+|..++...+  ......+..+|+.+|.+++|.|+|+||...+...       +.
T Consensus         5 ~~~~l~~~F~~~D~d--~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~-------~~   75 (172)
T 2znd_A            5 DQSFLWNVFQRVDKD--RSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI-------TD   75 (172)
T ss_dssp             -CHHHHHHHHHHCTT--CSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH-------HH
T ss_pred             chhHHHHHHHHhCCC--CCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HH
Confidence            346788999999999  999999999999987644  2445678999999999999999999999988643       56


Q ss_pred             HHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          124 IEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       124 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ++.+|+.+|.|++|.|+.+||..++..+    |.+++++++..++..+
T Consensus        76 ~~~~F~~~D~d~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~~~~  119 (172)
T 2znd_A           76 WQNVFRTYDRDNSGMIDKNELKQALSGF----GYRLSDQFHDILIRKF  119 (172)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHT----TCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCccCHHHHHHHHHHc----CCCCCHHHHHHHHHHh
Confidence            8999999999999999999999999775    7788888877766654

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.67  E-value=8e-16  Score=110.87  Aligned_cols=112  Identities=20%  Similarity=0.410  Sum_probs=95.9

Q ss_pred             HHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHH
Q 030405           48 EALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEF  126 (178)
Q Consensus        48 ~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~  126 (178)
                      +++...|..+|.+  ++|.|+..+|..++...+ ......+..+|+.+|.+++|.|+|+||...+...       +.++.
T Consensus        27 ~~l~~~F~~~D~d--~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~-------~~~~~   97 (191)
T 1y1x_A           27 QELMEWFRAVDTD--GSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI-------LSMRE   97 (191)
T ss_dssp             SCHHHHHHHHCTT--CSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-------HHHHH
T ss_pred             HHHHHHHHHHcCC--CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH-------HHHHH
Confidence            5688999999999  999999999999995543 3346678999999999999999999999988643       56899


Q ss_pred             HHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 030405          127 SFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL  172 (178)
Q Consensus       127 ~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~  172 (178)
                      +|+.+|.|++|.|+.+||..++..+    |..+++++++.++..+-
T Consensus        98 ~F~~~D~d~~G~i~~~e~~~~l~~~----g~~~~~~~~~~~~~~~D  139 (191)
T 1y1x_A           98 GFRKRDSSGDGRLDSNEVRAALLSS----GYQVSEQTFQALMRKFD  139 (191)
T ss_dssp             HHHHHCTTSSSCBCHHHHHHHHHTT----SCCCCHHHHHHHHHHHC
T ss_pred             HHHHhCCCCCCeEcHHHHHHHHHHh----CCCCCHHHHHHHHHHhC
Confidence            9999999999999999999998765    77888888877766553

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=99.67  E-value=1.9e-16  Score=117.26  Aligned_cols=108  Identities=19%  Similarity=0.082  Sum_probs=85.6

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHH-hcCCCC-----CHHHHHHHHHHH-----hcCCCCcccHHHHHH
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL-FKTNKK-----ESLFADRVFDLF-----DTKHNGILDFEEFAR  109 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l-~~~~~~-----~~~~~~~lf~~~-----d~~~~g~i~~~ef~~  109 (178)
                      .+++.++..++..|..+|.+  ++|.|+..+|..++ ...+..     ....+..+|..+     |.+++|.|+|+||+.
T Consensus        44 ~ls~~~~~~l~~~F~~~D~d--~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~  121 (226)
T 2lvv_A           44 DKDAESKSRRIELFKQFDTN--GTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLE  121 (226)
T ss_dssp             SCCHHHHHHHHHHHHHHGGG--SCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHH
T ss_pred             hCCHHHHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHH
Confidence            57899999999999999999  99999999999854 332221     123345555555     999999999999999


Q ss_pred             HHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405          110 ALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus       110 ~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ++..... ....+.++.+|+.||.|++|+|+.+||..++..+
T Consensus       122 ~~~~~~~-~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~  162 (226)
T 2lvv_A          122 FRLMLCY-IYDIFELTVMFDTMDKDGSLLLELQEFKEALPKL  162 (226)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHH
T ss_pred             HHHHHHh-ccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHH
Confidence            6443322 2234689999999999999999999999999876

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=99.66  E-value=3.4e-16  Score=113.30  Aligned_cols=116  Identities=21%  Similarity=0.394  Sum_probs=99.9

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC------CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK------KESLFADRVFDLFDTKHNGILDFEEFARALSIFH  115 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~------~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~  115 (178)
                      .+++++++++. |..+|.+  ++|.|+..+|..++...+.      .....++.+|+.+|.+++|.|+|+||...+... 
T Consensus        27 ~~~~~~~~l~~-F~~~D~d--~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~-  102 (198)
T 1juo_A           27 FPGQTQDPLYG-YFAAVAG--QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-  102 (198)
T ss_dssp             CTTCCCCTTHH-HHHHHHT--TTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH-
T ss_pred             CCccccHHHHH-HHHHhCC--CCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH-
Confidence            45556777888 9999999  9999999999999877432      356678999999999999999999999988653 


Q ss_pred             CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          116 PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       116 ~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                            +.++.+|+.+|.|++|.|+.+||..++..+    |..+++++++.++..+
T Consensus       103 ------~~~~~~F~~~D~d~~G~I~~~el~~~l~~~----g~~~~~~~~~~l~~~~  148 (198)
T 1juo_A          103 ------NGWRQHFISFDTDRSGTVDPQELQKALTTM----GFRLSPQAVNSIAKRY  148 (198)
T ss_dssp             ------HHHHHHHHTTCTTCCSEECHHHHHHHHHHT----TCCCCHHHHHHHHHHT
T ss_pred             ------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHh----CCCCCHHHHHHHHHHh
Confidence                  578999999999999999999999999776    7789999988887765

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=99.65  E-value=3.4e-15  Score=104.82  Aligned_cols=107  Identities=20%  Similarity=0.333  Sum_probs=93.3

Q ss_pred             HHHHhhcccCCCCCcccHHHHHHHHhcCCC------CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHH
Q 030405           52 ELFKKISSAVIDDGLINKEEFQLALFKTNK------KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIE  125 (178)
Q Consensus        52 ~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~------~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~  125 (178)
                      ..|..+|.+  ++|.|+..+|..++...+.      .....+..+|+.+|.+++|.|+|+||...+...       +.++
T Consensus         3 ~~F~~~D~d--~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~   73 (165)
T 1k94_A            3 YTYFSAVAG--QDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL-------NAWK   73 (165)
T ss_dssp             HHHHHHHHG--GGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------HHHH
T ss_pred             HHHHHHhCC--CCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHH
Confidence            468889999  9999999999999877432      356678999999999999999999999988653       5689


Q ss_pred             HHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          126 FSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       126 ~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      .+|+.+|.|++|.|+.+|+..++..+    |.++++++++.++..+
T Consensus        74 ~~F~~~D~d~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~~~~  115 (165)
T 1k94_A           74 ENFMTVDQDGSGTVEHHELRQAIGLM----GYRLSPQTLTTIVKRY  115 (165)
T ss_dssp             HHHHHHCTTCCSBCCHHHHHHHHHHT----TCCCCHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCceECHHHHHHHHHHh----CCCCCHHHHHHHHHHh
Confidence            99999999999999999999999775    7889999998888766

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=99.65  E-value=5.4e-16  Score=111.00  Aligned_cols=122  Identities=15%  Similarity=0.236  Sum_probs=93.9

Q ss_pred             hcccCcc-ccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 030405           16 VNCCDAD-LYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLF   94 (178)
Q Consensus        16 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~   94 (178)
                      ||+..+. +.+     +.+..+...+..  .++.++...|..+|    ++|.|+..+|..++..  ......+..+|+.+
T Consensus         2 mg~~~~~~~~~-----~~l~~~~~~~~~--~~~~~~~~~F~~~D----~dG~I~~~el~~~lg~--~~~~~~~~~i~~~~   68 (179)
T 3a8r_A            2 MGTKSSAAVAL-----KGLQFVTAKVGN--DGWAAVEKRFNQLQ----VDGVLLRSRFGKCIGM--DGSDEFAVQMFDSL   68 (179)
T ss_dssp             --CHHHHHHHH-----HHHHHHHHHHCC--CCHHHHHHHHHHHC----BTTBEEGGGHHHHHTC--CSCHHHHHHHHHHH
T ss_pred             CCCCcchhhhH-----HHHHHHHhccch--hhHHHHHHHHhccC----CCCCCcHHHHHHHHCC--CCcHHHHHHHHHHH
Confidence            5654443 234     567776666533  45778899999998    4799999999997732  23345678899888


Q ss_pred             h---cCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH-HH
Q 030405           95 D---TKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV-AT  151 (178)
Q Consensus        95 d---~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~-~~  151 (178)
                      +   .+++|.|++.+|..++..+.. ....+.++.+|+.||.|++|+|+.+||..+|. .+
T Consensus        69 d~~~~~~~~~i~~~ef~~~~~~~~~-~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~  128 (179)
T 3a8r_A           69 ARKRGIVKQVLTKDELKDFYEQLTD-QGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSA  128 (179)
T ss_dssp             HHHHTCCSSEECHHHHHHHHHHHHC-CCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHH
T ss_pred             HHhccCCCCCcCHHHHHHHHHHHcC-CCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHh
Confidence            7   456788999999998877654 46778999999999999999999999999997 55

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=99.64  E-value=4.1e-15  Score=104.63  Aligned_cols=107  Identities=19%  Similarity=0.344  Sum_probs=92.6

Q ss_pred             HHHHhhcccCCCCCcccHHHHHHHHhcCCC------CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHH
Q 030405           52 ELFKKISSAVIDDGLINKEEFQLALFKTNK------KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIE  125 (178)
Q Consensus        52 ~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~------~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~  125 (178)
                      ..|..+|.+  ++|.|+..+|..++...+.      .....++.+|+.+|.+++|.|+|+||...+...       +.++
T Consensus         5 ~~F~~~D~d--~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~   75 (167)
T 1gjy_A            5 YGYFASVAG--QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-------NGWR   75 (167)
T ss_dssp             HHHHHHHCC--TTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH-------HHHH
T ss_pred             HHHHHHHcC--CCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-------HHHH
Confidence            458889999  9999999999999877432      356678999999999999999999999988654       5789


Q ss_pred             HHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          126 FSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       126 ~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      .+|+.+|.|++|.|+.+|+..++..+    |.++++++++.++..+
T Consensus        76 ~~F~~~D~d~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~~~~  117 (167)
T 1gjy_A           76 QHFISFDSDRSGTVDPQELQKALTTM----GFRLNPQTVNSIAKRY  117 (167)
T ss_dssp             HHHHHHCTTCCSEECHHHHHHHHHTT----TCCCCHHHHHHHHHHT
T ss_pred             HHHHHhCCCCCCcCCHHHHHHHHHHc----CCCCCHHHHHHHHHHh
Confidence            99999999999999999999998765    7789999988877765

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=99.64  E-value=1.4e-15  Score=111.19  Aligned_cols=130  Identities=27%  Similarity=0.462  Sum_probs=90.7

Q ss_pred             hcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCC--HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC
Q 030405           39 ETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKE--SLFADRVFDLFDTKHNGILDFEEFARALSIFHP  116 (178)
Q Consensus        39 ~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~--~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~  116 (178)
                      .++++.++++.+...|+..  +  ++|.|+..+|..++...+...  ...++.+|+.+|.+++|.|+|.||..++..+..
T Consensus        13 ~t~ls~~ei~~~f~~fD~~--~--~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~   88 (211)
T 2ggz_A           13 QKAVPTQETHVWYRTFMME--Y--PSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQ   88 (211)
T ss_dssp             -----------CCCSHHHH--C--TTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSC
T ss_pred             cCCCCHHHHHHHHHHHHHh--C--CCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhcc
Confidence            4557777776666666543  2  589999999999987765543  345789999999999999999999999988765


Q ss_pred             CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHhhcc
Q 030405          117 NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG-MNLSDDVIESIIDKVLSLIQ  176 (178)
Q Consensus       117 ~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~-~~l~~~~~~~~~~~~~~~~D  176 (178)
                       ....+.++.+|+.||.|++|.|+.+||..++..+....+ ..++.++   .++.+|..+|
T Consensus        89 -~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~---~~~~~f~~~D  145 (211)
T 2ggz_A           89 -EKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEE---FINLVFHKID  145 (211)
T ss_dssp             -SSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHH---HHHHHHHHHC
T ss_pred             -CchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHH---HHHHHHHHhC
Confidence             567788999999999999999999999999987621111 4455433   3344454444

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=99.64  E-value=1.4e-15  Score=107.21  Aligned_cols=119  Identities=18%  Similarity=0.234  Sum_probs=93.1

Q ss_pred             CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC----CC-CHHH-H--------HHHHHHHhcCCCCcccHHHHH
Q 030405           43 SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN----KK-ESLF-A--------DRVFDLFDTKHNGILDFEEFA  108 (178)
Q Consensus        43 ~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~----~~-~~~~-~--------~~lf~~~d~~~~g~i~~~ef~  108 (178)
                      |+.+++++...|..+|.+  ++|.|+..+|..++...+    .. .... +        +.+|+.+|  ++|.|+|+||+
T Consensus         1 s~~~~~~l~~~F~~~D~d--~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~   76 (174)
T 1q80_A            1 SDLWVQKMKTYFNRIDFD--KDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFI   76 (174)
T ss_dssp             CHHHHHHHHHHHHHHCTT--CSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHH
T ss_pred             CHHHHHHHHHHHHhcCCC--CCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHH
Confidence            467889999999999999  999999999999886533    22 2222 2        46788888  78999999999


Q ss_pred             HHHHhhCCCC----ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          109 RALSIFHPNS----PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       109 ~~~~~~~~~~----~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ..+.......    ...+.++.+|+.+|.|++|+|+.+||..++..+    |  +++++++.++..+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~----g--~~~~~~~~~~~~~  137 (174)
T 1q80_A           77 NSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML----G--LDKTMAPASFDAI  137 (174)
T ss_dssp             HHHHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHH----T--CCGGGHHHHHHHH
T ss_pred             HHHHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHc----C--CCHHHHHHHHHHh
Confidence            9988775421    123678999999999999999999999999776    3  6666655555443

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=99.62  E-value=6.7e-15  Score=107.60  Aligned_cols=135  Identities=14%  Similarity=0.168  Sum_probs=107.5

Q ss_pred             chhhhhhhcc-cCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHH
Q 030405            9 KHFCVVVVNC-CDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLF   86 (178)
Q Consensus         9 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~   86 (178)
                      ..++..+..+ .++.++.     ..+..+....+++......+...|..+|.+  ++|.|+..+|..++.... ......
T Consensus        22 ~~~f~~fD~~~~~G~is~-----~El~~~l~~~~~~~~~~~~~~~~f~~~D~d--~dG~I~~~Ef~~~~~~~~~~~~~~~   94 (211)
T 2ggz_A           22 HVWYRTFMMEYPSGLQTL-----HEFKTLLGLQGLNQKANKHIDQVYNTFDTN--KDGFVDFLEFIAAVNLIMQEKMEQK   94 (211)
T ss_dssp             --CCCSHHHHCTTSEEEH-----HHHHHHTTCCSCCHHHHHHHHHHHHHHCTT--CSSEEEHHHHHHHHHHHSCSSHHHH
T ss_pred             HHHHHHHHHhCCCCcCCH-----HHHHHHHHHhCCCcchHHHHHHHHHHHcCC--CCCeEeHHHHHHHHHHhccCchHHH
Confidence            3445555444 5666666     778887777777777777889999999999  999999999999886532 233456


Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhC-----CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFH-----PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~-----~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      +..+|+.+|.+++|.|+++||..++..+.     ......+.+..+|+.+|.|++|.|+++||..++..
T Consensus        95 l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  163 (211)
T 2ggz_A           95 LKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK  163 (211)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHT
T ss_pred             HHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHh
Confidence            78999999999999999999999998775     22344566899999999999999999999999853

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=99.62  E-value=4.3e-15  Score=107.33  Aligned_cols=107  Identities=28%  Similarity=0.504  Sum_probs=87.3

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCH--HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES--LFADRVFDLFDTKHNGILDFEEFARALSIFHPN  117 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~--~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~  117 (178)
                      ++++..+++.+...|+..  +  ++|.|+..+|..++...+....  ..+..+|+.+|.+++|.|++.||..++..+.. 
T Consensus         9 t~~~~~el~~~f~~fd~~--~--~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~-   83 (198)
T 2r2i_A            9 EELSATECHQWYKKFMTE--C--PSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLK-   83 (198)
T ss_dssp             HHHHTSCHHHHHHHHHHH--C--TTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSS-
T ss_pred             CCCCHHHHHHHHHHHHHh--C--CCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHcc-
Confidence            334555555555555432  2  5899999999999977655432  34789999999999999999999999988876 


Q ss_pred             CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405          118 SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus       118 ~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ....+.++.+|+.||.|++|.|+.+||..++..+
T Consensus        84 ~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~  117 (198)
T 2r2i_A           84 GKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAI  117 (198)
T ss_dssp             CCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHT
T ss_pred             CchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            5677889999999999999999999999999876

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=99.62  E-value=5.8e-15  Score=103.10  Aligned_cols=118  Identities=14%  Similarity=0.164  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHhhcccCCCCCcccHHHHHHHHh----cCC-CCCHHHH-----------HHHHHHHhcCCCCcccHHHHHH
Q 030405           46 EIEALYELFKKISSAVIDDGLINKEEFQLALF----KTN-KKESLFA-----------DRVFDLFDTKHNGILDFEEFAR  109 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~----~~~-~~~~~~~-----------~~lf~~~d~~~~g~i~~~ef~~  109 (178)
                      +++.+...|..+|.+  ++|.|+..+|..++.    ..+ ......+           +.+|..+|.+++|.|+++||..
T Consensus         2 ~~~~l~~~F~~~D~d--~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~   79 (166)
T 3akb_A            2 YERRIAARFTTFDQD--GNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVT   79 (166)
T ss_dssp             HHHHHHHHHHHHCTT--CSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHH
T ss_pred             HHHHHHHHHhHHcCC--CCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence            467899999999999  999999999998753    212 1222222           3568999999999999999998


Q ss_pred             HHHhhCCCCCh------hHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          110 ALSIFHPNSPI------DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       110 ~~~~~~~~~~~------~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ++.........      .+.++.+|+.+|.|++|.|+.+||..++..+    |  ++++++..++..+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~----~--~~~~~~~~~~~~~  141 (166)
T 3akb_A           80 GAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAF----G--VPEDLARQAAAAL  141 (166)
T ss_dssp             THHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHT----T--CCHHHHHHHHHHH
T ss_pred             HHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh----C--CCHHHHHHHHHHh
Confidence            87765431111      2348899999999999999999999998775    4  7887777666554

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.62  E-value=1.3e-14  Score=100.31  Aligned_cols=133  Identities=18%  Similarity=0.226  Sum_probs=109.1

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNK   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~   81 (178)
                      .-++.+|..+..+.++.++.     ..+..+.+..+.  +..+   +...+...|.+  ++|.++..+|..++..  ...
T Consensus        10 ~el~~~F~~~D~d~~G~I~~-----~El~~~l~~~~~~~~~~~---~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~~~   79 (148)
T 2lmt_A           10 AEFKDAFVQFDKEGTGKIAT-----RELGTLMRTLGQNPTEAE---LQDLIAEAENN--NNGQLNFTEFCGIMAKQMRET   79 (148)
T ss_dssp             HHHHHHHHHHHCSSCCEEEG-----GGHHHHHHHHTCCCCHHH---HHHHHHHHHTT--STTEEEHHHHHHHHHHTTTTT
T ss_pred             HHHHHHHHHHcCCCCCeECH-----HHHHHHHHhcCCCchHHH---HHHHHHhcccC--CCCcccHHHHHHHHHHHhccc
Confidence            45778888899999999988     888887766544  4544   44556666777  8999999999987755  223


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .....+..+|+.+|.+++|.|+.+||..++..+.. ..+.+.+..+|+.+|.|++|.|+++||.++|.
T Consensus        80 ~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~-~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~  146 (148)
T 2lmt_A           80 DTEEEMREAFKIFDRDGDGFISPAELRFVMINLGE-KVTDEEIDEMIREADFDGDGMINYEEFVWMIS  146 (148)
T ss_dssp             TTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTC-CCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred             CcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCc-cccHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            34556789999999999999999999999998876 56778899999999999999999999999873

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=99.61  E-value=2.3e-15  Score=101.36  Aligned_cols=100  Identities=23%  Similarity=0.340  Sum_probs=82.4

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC--CChhHHHHH
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPN--SPIDDKIEF  126 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~--~~~~e~~~~  126 (178)
                      +...|..+|.+  ++|.|+..+|..++...+.. ....+..+|+.+|.+++|.|+++||...+..+...  ....+.++.
T Consensus         2 l~~~F~~~D~~--~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~   79 (134)
T 1jfj_A            2 AEALFKEIDVN--GDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKV   79 (134)
T ss_dssp             HHHHHHHHCTT--CSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHH
T ss_pred             HHHHHHHHCCC--CCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHH
Confidence            56789999999  99999999999998775433 34568899999999999999999999988532111  233456899


Q ss_pred             HHHhhCCCCCCceeHHHHHHHHHHH
Q 030405          127 SFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus       127 ~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      +|+.+|.|++|.|+.+||..++..+
T Consensus        80 ~f~~~D~d~~G~i~~~e~~~~l~~~  104 (134)
T 1jfj_A           80 LYKLMDVDGDGKLTKEEVTSFFKKH  104 (134)
T ss_dssp             HHHHHCCSSSSEEEHHHHHHHHTTT
T ss_pred             HHHHHCCCCCCccCHHHHHHHHHHh
Confidence            9999999999999999999998653

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.60  E-value=8e-15  Score=100.72  Aligned_cols=133  Identities=16%  Similarity=0.223  Sum_probs=106.7

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--   80 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--   80 (178)
                      +..|+.+|..+..+.++.++.     ..+.......+.  +..++   ...|..+|.+  ++|.|+..+|..++....  
T Consensus         5 ~~~l~~~F~~~D~d~~G~I~~-----~el~~~l~~~g~~~~~~~~---~~~~~~~d~~--~~g~i~~~eF~~~~~~~~~~   74 (143)
T 2obh_A            5 KQEIREAFDLFDADGTGTIDV-----KELKVAMRALGFEPKKEEI---KKMISEIDKE--GTGKMNFGDFLTVMTQKMSE   74 (143)
T ss_dssp             HHHHHHHHHTTCTTCCSEEEG-----GGHHHHHHHTTCCCCHHHH---HHHHHHHTTT--CCSEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcH-----HHHHHHHHHcCCCCCHHHH---HHHHHHhCCC--CCCeeeHHHHHHHHHHHhcc
Confidence            345777888888888888888     888887776554  55554   4456667887  899999999998874421  


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           81 KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        81 ~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ......+..+|+.+|.+++|.|+..||..++..+.. ..+++.+..+|+.+|.|++|.|+++||..++
T Consensus        75 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~  141 (143)
T 2obh_A           75 KDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGE-NLTDEELQEMIDEADRDGDGEVSEQEFLRIM  141 (143)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTC-CCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            112345788999999999999999999999988765 4677889999999999999999999999876

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.60  E-value=2.7e-15  Score=122.99  Aligned_cols=120  Identities=19%  Similarity=0.346  Sum_probs=98.9

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--------C-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--------N-KKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--------~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      ++.++++.+.+.|..+|.+  ++|.|+..||..++...        + ......++.+|+.+|.+++|.|+|+||..++.
T Consensus       349 ~~~~~~~~l~~~F~~~D~d--~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~  426 (504)
T 3q5i_A          349 TTLEERKELTDIFKKLDKN--GDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCM  426 (504)
T ss_dssp             SCHHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHS
T ss_pred             CcHHHHHHHHHHHHeeCCC--CCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            4889999999999999999  99999999999887552        2 23356789999999999999999999999886


Q ss_pred             hhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 030405          113 IFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK  170 (178)
Q Consensus       113 ~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~  170 (178)
                      .... ....+.++.+|+.||.|++|+|+.+||..++..      ..+++++++++++.
T Consensus       427 ~~~~-~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~------~~~~~~~~~~~~~~  477 (504)
T 3q5i_A          427 DKQI-LFSEERLRRAFNLFDTDKSGKITKEELANLFGL------TSISEKTWNDVLGE  477 (504)
T ss_dssp             CHHH-HTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC------SCCCHHHHHHHHHT
T ss_pred             hhhc-ccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh------CCCCHHHHHHHHHH
Confidence            5432 345678999999999999999999999998733      35788777655443

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.59  E-value=7.6e-15  Score=119.60  Aligned_cols=121  Identities=20%  Similarity=0.356  Sum_probs=97.3

Q ss_pred             CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc----CCCCC--------HHHHHHHHHHHhcCCCCcccHHHHHHH
Q 030405           43 SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK----TNKKE--------SLFADRVFDLFDTKHNGILDFEEFARA  110 (178)
Q Consensus        43 ~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~----~~~~~--------~~~~~~lf~~~d~~~~g~i~~~ef~~~  110 (178)
                      ++++++.+...|..+|.+  ++|.|+..||..++..    .+...        ...++.+|+.+|.+++|.|+|+||..+
T Consensus       330 ~~~~~~~l~~~F~~~D~d--~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~  407 (484)
T 3nyv_A          330 SQDETKELTAIFHKMDKN--GDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTV  407 (484)
T ss_dssp             HHHHHHHHHHHHHHHCTT--CSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhCcC--CCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHH
Confidence            567889999999999999  9999999999655433    22211        456789999999999999999999998


Q ss_pred             HHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 030405          111 LSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL  172 (178)
Q Consensus       111 ~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~  172 (178)
                      +..... ....+.++.+|+.||.|++|+|+.+||..++..      ..+++++++.+++.+-
T Consensus       408 ~~~~~~-~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~------~~~~~~~~~~~~~~~D  462 (484)
T 3nyv_A          408 AMDRKT-LLSRERLERAFRMFDSDNSGKISSTELATIFGV------SDVDSETWKSVLSEVD  462 (484)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH------TTCCHHHHHHHHHHHC
T ss_pred             HHhccc-cCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh------cCCCHHHHHHHHHHhc
Confidence            876533 345678999999999999999999999999855      3678888776665553

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.59  E-value=1.4e-15  Score=124.04  Aligned_cols=119  Identities=19%  Similarity=0.366  Sum_probs=84.6

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc----CCC-----------CCHHHHHHHHHHHhcCCCCcccHHH
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK----TNK-----------KESLFADRVFDLFDTKHNGILDFEE  106 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~----~~~-----------~~~~~~~~lf~~~d~~~~g~i~~~e  106 (178)
                      ++.++++.+...|..+|.+  ++|.|+..||..++..    .+.           .....++.+|+.+|.|++|.|+|+|
T Consensus       325 ~~~~~~~~l~~~F~~~D~d--~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~E  402 (486)
T 3mwu_A          325 TTLDETKQLTEIFRKLDTN--NDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSE  402 (486)
T ss_dssp             CCHHHHHHHHHHHHHHCTT--CSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHH
T ss_pred             ccHHHHHHHHHHHHHhCCC--CCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHH
Confidence            4778899999999999999  9999999999766532    121           1255688999999999999999999


Q ss_pred             HHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHH
Q 030405          107 FARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESI  167 (178)
Q Consensus       107 f~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~  167 (178)
                      |+..+..... ....+.++.+|+.||.|++|.|+.+||..++..+    |..+++++++.+
T Consensus       403 f~~~~~~~~~-~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~----g~~~~~~~~~~~  458 (486)
T 3mwu_A          403 FIASAIDRTI-LLSRERMERAFKMFDKDGSGKISTKELFKLFSQA----DSSIQMEELESI  458 (486)
T ss_dssp             HHHHHSCTTT-TCCHHHHHHHHHHHCSSCSSSBCSSCC-----------------------
T ss_pred             HHHHHHhhhc-cchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc----CCCCCHHHHHHH
Confidence            9988765544 4567889999999999999999999999998776    666777665543

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=99.59  E-value=1.9e-14  Score=104.03  Aligned_cols=155  Identities=14%  Similarity=0.156  Sum_probs=117.1

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-   81 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-   81 (178)
                      +..++.+|..+..+.++.++.     ..+.......+.  +..+   +...|..+|.+  ++|.|+..+|..++..... 
T Consensus        36 ~~~l~~~F~~~D~d~~G~i~~-----~e~~~~l~~~~~~~~~~~---~~~~~~~~D~d--~dg~i~~~ef~~~~~~~~~~  105 (204)
T 3e3r_A           36 IQGLARFFRQLDRDGSRSLDA-----DEFRQGLAKLGLVLDQAE---AEGVCRKWDRN--GSGTLDLEEFLRALRPPMSQ  105 (204)
T ss_dssp             ----CHHHHHHCTTCCSSBCH-----HHHHHHHHTTTCCCCHHH---HHHHHHHHCTT--CSSSBCHHHHHHHTSCCCCH
T ss_pred             HHHHHHHHHHHccCCCCCcCH-----HHHHHHHHHcCCCCCHHH---HHHHHHHhccC--CCCcCcHHHHHHHHHhhcCc
Confidence            345677888888888888877     888887766543  4544   55666677888  9999999999998755322 


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh------CCCCChhHHHHHHHHhhCC-CCCCceeHHHHHHHHHHHHhh
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIF------HPNSPIDDKIEFSFQLYDL-KQQGFIERQEVKQMVVATLTE  154 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~------~~~~~~~e~~~~~F~~~D~-d~~G~I~~~e~~~~l~~~~~~  154 (178)
                      .....+..+|+.+|.+++|.|+++||..++...      ......++.+..+|+.+|. |++|.|+++||..++..+.. 
T Consensus       106 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~-  184 (204)
T 3e3r_A          106 AREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSA-  184 (204)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHHH-
T ss_pred             hHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcCc-
Confidence            223457899999999999999999999988642      1223556779999999998 99999999999999988732 


Q ss_pred             cCCCCCHHHHHHHHHHHH
Q 030405          155 SGMNLSDDVIESIIDKVL  172 (178)
Q Consensus       155 ~~~~l~~~~~~~~~~~~~  172 (178)
                        .-.++++++.++..+.
T Consensus       185 --~~~~d~~f~~~~~~~w  200 (204)
T 3e3r_A          185 --SMNTDEEFVAMMTSAW  200 (204)
T ss_dssp             --HCSSHHHHHHHHHHHH
T ss_pred             --cCCChHHHHHHHHHhC
Confidence              2356778888887765

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.58  E-value=1.5e-15  Score=124.19  Aligned_cols=120  Identities=23%  Similarity=0.311  Sum_probs=97.3

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC---------CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN---------KKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~---------~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      +++++++.+.+.|..+|.+  ++|.|+..||..++...+         ......++.+|+.+|.+++|.|+|+||..++.
T Consensus       340 ~~~~~~~~l~~~F~~~D~d--~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~  417 (494)
T 3lij_A          340 TSQEETKELTDIFRHIDKN--GDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAM  417 (494)
T ss_dssp             CCHHHHHHHHHHHHHHCTT--CSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHS
T ss_pred             ccHHHHHHHHHHHHHhCcC--CCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            4888999999999999999  999999999998876532         12245688999999999999999999999876


Q ss_pred             hhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 030405          113 IFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK  170 (178)
Q Consensus       113 ~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~  170 (178)
                      .... ....+.++.+|+.||.|++|+|+.+||..++..      ..+++++++++++.
T Consensus       418 ~~~~-~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~------~~~~~~~~~~~~~~  468 (494)
T 3lij_A          418 DRKS-LLSKDKLESAFQKFDQDGNGKISVDELASVFGL------DHLESKTWKEMISG  468 (494)
T ss_dssp             CHHH-HTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C------CSCCCHHHHHHHHT
T ss_pred             hhhc-cccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh------cCCCHHHHHHHHHH
Confidence            5432 345678999999999999999999999998732      35666666554443

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=99.58  E-value=5.2e-15  Score=111.41  Aligned_cols=128  Identities=21%  Similarity=0.344  Sum_probs=101.5

Q ss_pred             HHHHHHHHhhcccCCCCCcccHHHHHHHHhcC----CCC-CHHH----HHHHHHHHhcCCCCcccHHHHHHHHHhh----
Q 030405           48 EALYELFKKISSAVIDDGLINKEEFQLALFKT----NKK-ESLF----ADRVFDLFDTKHNGILDFEEFARALSIF----  114 (178)
Q Consensus        48 ~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~----~~~-~~~~----~~~lf~~~d~~~~g~i~~~ef~~~~~~~----  114 (178)
                      ..+...|..+|.+  ++|.|+..+|..++...    +.. ....    +..+|+.+|.+++|.|+|+||...+...    
T Consensus       104 ~~l~~~F~~~D~d--~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~  181 (272)
T 2be4_A          104 VEFMKIWRKYDAD--SSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFL  181 (272)
T ss_dssp             HHHHHHHHHHCTT--CCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSS
T ss_pred             HHHHHHHHHhCCC--CCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHH
Confidence            4577889999999  99999999999988653    222 2232    3559999999999999999998876431    


Q ss_pred             -CC------CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhccC
Q 030405          115 -HP------NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQL  177 (178)
Q Consensus       115 -~~------~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~D~  177 (178)
                       ..      .....+.++.+|+.+|.|++|.|+.+||..++..+....+.++++++++.+++.+|..+|.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~  251 (272)
T 2be4_A          182 LQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDM  251 (272)
T ss_dssp             TTSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCC
T ss_pred             hhhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCC
Confidence             10      0123467899999999999999999999999998755445689999999988899988873

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=99.57  E-value=2.5e-14  Score=99.81  Aligned_cols=136  Identities=18%  Similarity=0.198  Sum_probs=107.4

Q ss_pred             ccchhhhhhhcccCccccCCCCCCCcHHHHHh------hcCCCHHHHHHHH--------HHHHhhcccCCCCCcccHHHH
Q 030405            7 GLKHFCVVVVNCCDADLYKQPRGLEDPEALAR------ETVFSVSEIEALY--------ELFKKISSAVIDDGLINKEEF   72 (178)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~l~--------~~F~~~d~~~~~~g~i~~~ef   72 (178)
                      .++.++..+..+.++.++.     ..+.....      -...+..++..+.        ..|..+|.+  ++|.|+..+|
T Consensus         5 ~l~~~F~~~D~d~dG~i~~-----~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d--~~g~i~~~ef   77 (166)
T 3akb_A            5 RIAARFTTFDQDGNGHIDR-----SDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRD--GDQRITREEF   77 (166)
T ss_dssp             HHHHHHHHHCTTCSSEECH-----HHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTT--SSSCEEHHHH
T ss_pred             HHHHHHhHHcCCCCCCcCH-----HHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC--CCCcCcHHHH
Confidence            4567777787778888877     77776422      2245666776664        778999999  9999999999


Q ss_pred             HHHHhcCCCCC--------HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHH
Q 030405           73 QLALFKTNKKE--------SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEV  144 (178)
Q Consensus        73 ~~~l~~~~~~~--------~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~  144 (178)
                      ..++.......        ...+..+|+.+|.+++|.|+++||..++..+.   .+.+.+..+|+.+|.|++|.|+++||
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~---~~~~~~~~~~~~~D~d~dg~i~~~ef  154 (166)
T 3akb_A           78 VTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG---VPEDLARQAAAALDTDGDGKVGETEI  154 (166)
T ss_dssp             HHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT---CCHHHHHHHHHHHCTTCSSBCCHHHH
T ss_pred             HHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC---CCHHHHHHHHHHhCCCCCCcCcHHHH
Confidence            98765422111        12368899999999999999999999998764   56788999999999999999999999


Q ss_pred             HHHHHHHH
Q 030405          145 KQMVVATL  152 (178)
Q Consensus       145 ~~~l~~~~  152 (178)
                      ..++..++
T Consensus       155 ~~~~~~~~  162 (166)
T 3akb_A          155 VPAFARYF  162 (166)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHh
Confidence            99997763

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=99.57  E-value=5.9e-14  Score=100.46  Aligned_cols=135  Identities=16%  Similarity=0.203  Sum_probs=101.9

Q ss_pred             chhhhhhhcc-cCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHH
Q 030405            9 KHFCVVVVNC-CDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLF   86 (178)
Q Consensus         9 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~   86 (178)
                      ..++..+..+ .++.++.     ..+..+..........-..+...|..+|.+  ++|.|+..+|..++.... ......
T Consensus        28 ~~~f~~~D~~~~~G~i~~-----~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d--~~G~i~~~ef~~~~~~~~~~~~~~~  100 (190)
T 2l2e_A           28 QQWYKGFFKDCPSGHLNK-----SEFQKIYKQFFPFGDPSAFAEYVFNVFDAD--KNGYIDFKEFICALSVTSRGELNDK  100 (190)
T ss_dssp             HHHHHHHHHHSCCCEECH-----HHHHHHHHHHCCCSCHHHHHHHHHHHHCSS--STTCEEHHHHHHHHTTSSCSCSHHH
T ss_pred             HHHHHHHHHhCCCCcCCH-----HHHHHHHHHhCCCCCccHHHHHHHHHhcCC--CCCeEeHHHHHHHHHHHcCCCHHHH
Confidence            3345555555 4666666     777776655422111224677889999999  999999999999986643 334566


Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhC-----------CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFH-----------PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~-----------~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      +..+|+.+|.+++|.|+++||..++..+.           ......+.++.+|+.+|.|++|.|+++||..++..
T Consensus       101 ~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  175 (190)
T 2l2e_A          101 LIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKR  175 (190)
T ss_dssp             HHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHT
T ss_pred             HHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            78999999999999999999999887630           11345678999999999999999999999999854

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=99.57  E-value=4.1e-14  Score=101.37  Aligned_cols=138  Identities=13%  Similarity=0.119  Sum_probs=107.6

Q ss_pred             cccchhhhhh-hcccCccccCCCCCCCcHHHHHhhc----C--CCHHHHHHHH--------HHHHhhcccCCCCCcccHH
Q 030405            6 DGLKHFCVVV-VNCCDADLYKQPRGLEDPEALARET----V--FSVSEIEALY--------ELFKKISSAVIDDGLINKE   70 (178)
Q Consensus         6 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~i~~l~--------~~F~~~d~~~~~~g~i~~~   70 (178)
                      ..++.+|..+ ..+.++.++.     .++.......    +  .+..++..+.        ..|..+|.+  ++|.|+..
T Consensus        12 ~~l~~~F~~~~D~d~dG~i~~-----~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d--~dG~i~~~   84 (191)
T 2ccm_A           12 NKILRVFNTFYDCNHDGVIEW-----DDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADEN--EDEQVTKE   84 (191)
T ss_dssp             HHHHHHHHHHTCTTCSSEECH-----HHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTT--CSSCEEHH
T ss_pred             HHHHHhccccccCCCCCeeeH-----HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC--CCCeECHH
Confidence            3466778888 7778888877     7777765544    3  4455555554        334788988  99999999


Q ss_pred             HHHHHHhcCC----------CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCcee
Q 030405           71 EFQLALFKTN----------KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIE  140 (178)
Q Consensus        71 ef~~~l~~~~----------~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~  140 (178)
                      +|..++....          ......+..+|+.+|.+++|.|+++||..++..+.   .+.+.+..+|+.+|.|++|.|+
T Consensus        85 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g---~~~~~~~~~~~~~D~d~dG~i~  161 (191)
T 2ccm_A           85 EWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG---IPKSDCDAAFDTLSDGGKTMVT  161 (191)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT---CCHHHHHHHHHHHTTTTTSCCB
T ss_pred             HHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC---CCHHHHHHHHHHhCCCCCCCcC
Confidence            9998875421          11134578899999999999999999999997763   5678899999999999999999


Q ss_pred             HHHHHHHHHHHHh
Q 030405          141 RQEVKQMVVATLT  153 (178)
Q Consensus       141 ~~e~~~~l~~~~~  153 (178)
                      .+||..++...+.
T Consensus       162 ~~Ef~~~~~~~~~  174 (191)
T 2ccm_A          162 REIFARLWTEYFV  174 (191)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999988754

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=99.57  E-value=2.7e-14  Score=106.98  Aligned_cols=122  Identities=23%  Similarity=0.418  Sum_probs=97.2

Q ss_pred             HHHHHHHHhhcccCCCCCcccHHHHHHHHhcC----CC-CCHHHHH----HHHHHHhcCCCCcccHHHHHHHHHh-----
Q 030405           48 EALYELFKKISSAVIDDGLINKEEFQLALFKT----NK-KESLFAD----RVFDLFDTKHNGILDFEEFARALSI-----  113 (178)
Q Consensus        48 ~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~----~~-~~~~~~~----~lf~~~d~~~~g~i~~~ef~~~~~~-----  113 (178)
                      ..+...|..+|.+  ++|.|+..+|..++...    +. .....+.    .+|+.+|.+++|.|+|+||..++..     
T Consensus       103 ~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~  180 (263)
T 2f33_A          103 EEFMKTWRKYDTD--HSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFL  180 (263)
T ss_dssp             HHHHHHHTTSSTT--TCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSH
T ss_pred             HHHHHHHHHHCCC--CCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHH
Confidence            4578899999999  99999999999988653    32 2333334    4999999999999999999987753     


Q ss_pred             --hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          114 --FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       114 --~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                        ........+.++.+|+.||.|++|+|+.+||..++..+....+++++++++..+++.+
T Consensus       181 ~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~~~e~~~~~~~~  240 (263)
T 2f33_A          181 LKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNI  240 (263)
T ss_dssp             HHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCCTTTHHHHHHHH
T ss_pred             HHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHh
Confidence              1111355678999999999999999999999999998755445588998888877764

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.56  E-value=5.3e-14  Score=97.75  Aligned_cols=134  Identities=16%  Similarity=0.242  Sum_probs=108.1

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNK   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~   81 (178)
                      ..|..+|..+..+.++.++.     ..+.......+  ++..+   +...|..+|.+  ++|.|+..+|..++..  ...
T Consensus        23 ~~l~~~F~~~D~~~~G~i~~-----~e~~~~l~~~~~~~~~~~---~~~l~~~~d~~--~~g~i~~~eF~~~~~~~~~~~   92 (161)
T 3fwb_A           23 QEIYEAFSLFDMNNDGFLDY-----HELKVAMKALGFELPKRE---ILDLIDEYDSE--GRHLMKYDDFYIVMGEKILKR   92 (161)
T ss_dssp             HHHHHHHHHHCTTSSSEECH-----HHHHHHHHHTTCCCCHHH---HHHHHHHHCTT--SSSCEEHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHCCCCCCcCcH-----HHHHHHHHHcCCCCCHHH---HHHHHHHhCcC--CCCeEeHHHHHHHHHHHHhcC
Confidence            45677788888888888877     78888777654  45555   45556666777  8999999999988754  223


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .....+..+|+.+|.+++|.|+.+||..++..+.. ....+.+..+|+.+|.|++|.|+++||..++..
T Consensus        93 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  160 (161)
T 3fwb_A           93 DPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGE-TLTDEELRAMIEEFDLDGDGEINENEFIAICTD  160 (161)
T ss_dssp             CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC-CCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            33556789999999999999999999999998765 567788999999999999999999999998853

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=99.56  E-value=1.2e-13  Score=97.30  Aligned_cols=137  Identities=19%  Similarity=0.169  Sum_probs=109.5

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHH----HHhhc--CCCHHHHHHHH--------HHHHhhcccCCCCCcccHH
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEA----LARET--VFSVSEIEALY--------ELFKKISSAVIDDGLINKE   70 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~i~~l~--------~~F~~~d~~~~~~g~i~~~   70 (178)
                      +..++.+|..+..+.++.++.     ..+..    +....  ..+..++..+.        ..|..+|.+  ++|.|+..
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~-----~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d--~dg~i~~~   78 (176)
T 1nya_A            6 SDRLKKRFDRWDFDGNGALER-----ADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVG--SDGSLTEE   78 (176)
T ss_dssp             HHHHHHHHHHCCSSCCSSBCS-----HHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSC--TTCCBCHH
T ss_pred             HHHHHHHHHHHcCCCCCcccH-----HHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCC--CCCeEcHH
Confidence            345677788888788888877     88877    44443  34566766554        788899999  99999999


Q ss_pred             HHHHHHhcC-CCCC--------HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeH
Q 030405           71 EFQLALFKT-NKKE--------SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIER  141 (178)
Q Consensus        71 ef~~~l~~~-~~~~--------~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~  141 (178)
                      +|..++... ....        ...+..+|+.+|.+++|.|+++||..++..+.   .+.+.+..+|+.+|.|++|.|++
T Consensus        79 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g---~~~~~~~~~~~~~D~d~dg~i~~  155 (176)
T 1nya_A           79 QFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG---MSKAEAAEAFNQVDTNGNGELSL  155 (176)
T ss_dssp             HHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT---CCHHHHHHHHHHHCTTCSSEEEH
T ss_pred             HHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC---CCHHHHHHHHHHhCCCCCCCCcH
Confidence            999987652 2222        24478999999999999999999999998764   56788999999999999999999


Q ss_pred             HHHHHHHHHH
Q 030405          142 QEVKQMVVAT  151 (178)
Q Consensus       142 ~e~~~~l~~~  151 (178)
                      +||..++..+
T Consensus       156 ~ef~~~~~~~  165 (176)
T 1nya_A          156 DELLTAVRDF  165 (176)
T ss_dssp             HHHHHHHSCC
T ss_pred             HHHHHHHHHH
Confidence            9999998654

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=99.55  E-value=7.4e-14  Score=101.22  Aligned_cols=134  Identities=14%  Similarity=0.168  Sum_probs=104.3

Q ss_pred             cchhhhhhhcc-cCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC-CCCCHH
Q 030405            8 LKHFCVVVVNC-CDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT-NKKESL   85 (178)
Q Consensus         8 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~-~~~~~~   85 (178)
                      ++.++..+..+ .++.++.     ..+..+....+. ......+...|..+|.+  ++|.|+..+|..++... ......
T Consensus        24 l~~~f~~~D~~~~~G~i~~-----~e~~~~l~~~~~-~~~~~~~~~~f~~~D~d--~~G~i~~~Ef~~~~~~~~~~~~~~   95 (204)
T 1jba_A           24 LQEWYKKFLEECPSGTLFM-----HEFKRFFKVPDN-EEATQYVEAMFRAFDTN--GDNTIDFLEYVAALNLVLRGTLEH   95 (204)
T ss_dssp             HHHHHHHHHSSSTTCCEEH-----HHHHHHHHCCSS-STTHHHHHHHHHHHCCS--SSSEECHHHHHHHHHHHSSCCCTH
T ss_pred             HHHHHHHHHhhCCCCCcCH-----HHHHHHHHHhcC-CCcHHHHHHHHHHHcCC--CCCeEeHHHHHHHHHHHccCCHHH
Confidence            45566677766 5777777     788887776554 22234566778888988  99999999999988653 233455


Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhC----------------CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFH----------------PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~----------------~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .+..+|+.+|.+++|.|+++||..++..+.                ......+.+..+|+.+|.|++|.|+.+||..++.
T Consensus        96 ~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~  175 (204)
T 1jba_A           96 KLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR  175 (204)
T ss_dssp             HHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            678999999999999999999999887651                0114567899999999999999999999999984

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=99.55  E-value=3.7e-14  Score=102.19  Aligned_cols=134  Identities=19%  Similarity=0.209  Sum_probs=106.6

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHH
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL   85 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~   85 (178)
                      ..|..+|..+..+.++.++.     .++.......+....  ..+...|..+|.+  ++|.|+..+|..++.........
T Consensus        52 ~~l~~~F~~~D~d~~G~i~~-----~El~~~l~~~g~~~~--~~~~~l~~~~D~d--~~g~i~~~EF~~~~~~~~~~~~~  122 (191)
T 3k21_A           52 EKLKSTFLVLDEDGKGYITK-----EQLKKGLEKDGLKLP--YNFDLLLDQIDSD--GSGKIDYTEFIAAALDRKQLSKK  122 (191)
T ss_dssp             HHHHHHHHHHCTTCSSEECH-----HHHHHHHHHTTCCCC--TTHHHHHHHHCTT--CSSSEEHHHHHHHHSCGGGCCHH
T ss_pred             HHHHHHHHHHCCCCCCCCcH-----HHHHHHHHHcCCCcH--HHHHHHHHHhCCC--CCCeEeHHHHHHHHHhhhhccHH
Confidence            45677788888888888877     888887776655433  4567778888988  99999999999987554344556


Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC-CCh---hHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFHPN-SPI---DDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~-~~~---~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      .+..+|+.+|.+++|.|+.+||..++...... ..+   .+.+..+|+.+|.|++|.|+++||..+|
T Consensus       123 ~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~  189 (191)
T 3k21_A          123 LIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMM  189 (191)
T ss_dssp             HHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHH
Confidence            68899999999999999999999999763321 112   2468999999999999999999999887

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.55  E-value=2.7e-13  Score=97.50  Aligned_cols=129  Identities=17%  Similarity=0.167  Sum_probs=102.9

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhc--CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARET--VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKE   83 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~   83 (178)
                      ..++.+|..+..+.++.++.     .++.......  .++..++.   ..|..+|.+  ++|.|+..+|..++...    
T Consensus        27 ~~l~~~F~~~D~d~~G~I~~-----~El~~~l~~~~~~~~~~~~~---~l~~~~D~d--~dG~I~~~EF~~~~~~~----   92 (191)
T 1y1x_A           27 QELMEWFRAVDTDGSGAISV-----PELNAALSSAGVPFSLATTE---KLLHMYDKN--HSGEITFDEFKDLHHFI----   92 (191)
T ss_dssp             SCHHHHHHHHCTTCSSSBCH-----HHHHHHHCBTTBCCCHHHHH---HHHHHHCTT--CSSSBCHHHHHHHHHHH----
T ss_pred             HHHHHHHHHHcCCCCCcCcH-----HHHHHHHHHcCCCCCHHHHH---HHHHHhCCC--CCCeEcHHHHHHHHHHH----
Confidence            45667777777777788777     7777766443  34565544   456677887  89999999999887542    


Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                       ..+..+|+.+|.+++|.|+.+||..++..+.. ..+++.+..+|+.+|.|++|.|+++||..++..
T Consensus        93 -~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~-~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  157 (191)
T 1y1x_A           93 -LSMREGFRKRDSSGDGRLDSNEVRAALLSSGY-QVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF  157 (191)
T ss_dssp             -HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSC-CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             -HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence             45688999999999999999999999987765 466788999999999999999999999998864

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.54  E-value=8.1e-14  Score=95.69  Aligned_cols=134  Identities=11%  Similarity=0.131  Sum_probs=106.7

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhh-cccCCCCCcccHHHHHHHHhcC--
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKI-SSAVIDDGLINKEEFQLALFKT--   79 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~-d~~~~~~g~i~~~ef~~~l~~~--   79 (178)
                      +..++.+|..+..+.++.++.     ..+.......+.  +..+   +...|..+ |.+  ++|.|+..+|..++...  
T Consensus         3 ~~~l~~~F~~~D~d~~G~i~~-----~el~~~l~~~g~~~~~~~---~~~l~~~~~D~~--~~g~i~~~eF~~~~~~~~~   72 (148)
T 1m45_A            3 TRANKDIFTLFDKKGQGAIAK-----DSLGDYLRAIGYNPTNQL---VQDIINADSSLR--DASSLTLDQITGLIEVNEK   72 (148)
T ss_dssp             CCCCTTCHHHHCTTCCSEEEG-----GGHHHHHHHTTCCCCHHH---HHHHHHC--CC----CCEEEHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHHhCCCCCHHH---HHHHHHHhhCCC--CCCeEcHHHHHHHHHHHHh
Confidence            345778888888888888888     888887776544  4444   55567777 888  89999999999887543  


Q ss_pred             -----CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           80 -----NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        80 -----~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                           .......+..+|+.+|.+++|.|+.+||..++..+.. ..+++.+..+|+.+|.|++|.|+++||..++.
T Consensus        73 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~  146 (148)
T 1m45_A           73 ELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGE-KLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL  146 (148)
T ss_dssp             HHHGGGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTT-CCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             hccccccccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC-CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence                 1233456789999999999999999999999988765 46778899999999999999999999999874

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.54  E-value=3.4e-14  Score=98.87  Aligned_cols=134  Identities=19%  Similarity=0.286  Sum_probs=105.0

Q ss_pred             cccchhhhhhhccc-CccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC---
Q 030405            6 DGLKHFCVVVVNCC-DADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT---   79 (178)
Q Consensus         6 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~---   79 (178)
                      ..++.+|..+..+. ++.++.     ..+.......+  ++..+   +...|..+|.+  ++|.|+..+|..++...   
T Consensus        18 ~~l~~~F~~~D~~~~~G~i~~-----~e~~~~l~~~~~~~~~~~---~~~~~~~~D~~--~~g~i~~~eF~~~~~~~~~~   87 (161)
T 1dtl_A           18 NEFKAAFDIFVLGAEDGSIST-----KELGKVMRMLGQNPTPEE---LQEMIDEVDED--GSGTVDFDEFLVMMVRSMKD   87 (161)
T ss_dssp             HHHHHHHHHHTTTCGGGSBCH-----HHHHHHHHHTTCCCCHHH---HHHHHHHHCTT--SSSSBCHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHcCCCCCCcCcH-----HHHHHHHHHcCCCCCHHH---HHHHHHHhCCC--CCCeEcHHHHHHHHHHHhcc
Confidence            34667777777777 778777     88888777655  45555   45566677888  99999999999987552   


Q ss_pred             --CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           80 --NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        80 --~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                        .......+..+|+.+|.+++|.|+.+||..++..+.. ..+.+.+..+|+.+|.|++|.|+++||..++..
T Consensus        88 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~-~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  159 (161)
T 1dtl_A           88 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGE-TITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG  159 (161)
T ss_dssp             ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC---CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred             cccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence              2233455789999999999999999999998877654 456788999999999999999999999998854

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=99.54  E-value=2.2e-14  Score=101.64  Aligned_cols=136  Identities=16%  Similarity=0.271  Sum_probs=106.3

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--C
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--N   80 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~   80 (178)
                      +..+..+|..+..+.++.++.     ..+.......+.  +..+   +...|..+|.+  ++|.|+..+|..++...  .
T Consensus        10 ~~~l~~~F~~~D~d~~G~i~~-----~e~~~~l~~~~~~~~~~~---~~~l~~~~D~~--~~g~i~~~EF~~~~~~~~~~   79 (179)
T 2f2o_A           10 IAEFKEAFSLFDKDGDGTITT-----KELGTVMRSLGQNPTEAE---LQDMINEVDAD--GNGTIDFPEFLTMMARKMKD   79 (179)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCH-----HHHHHHHHHTTCCCCHHH---HHHHHHHHCTT--CSSSBCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcH-----HHHHHHHHHcCCCCCHHH---HHHHHHHhccC--CCCCCcHHHHHHHHHHHccC
Confidence            345677788888888888877     888887766544  4444   55667777888  99999999999887542  1


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           81 KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        81 ~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ......+..+|+.+|.+++|.|+.+||..++..+.. ....+.+..+|+.+|.|++|.|+++||..++...
T Consensus        80 ~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~  149 (179)
T 2f2o_A           80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-KLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK  149 (179)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC---CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC-
T ss_pred             cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHc
Confidence            122345788999999999999999999999988765 4667889999999999999999999999998543

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.54  E-value=4.5e-14  Score=99.09  Aligned_cols=134  Identities=13%  Similarity=0.211  Sum_probs=106.3

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--C
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--K   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~   81 (178)
                      .-++.+|..+..+.++.++.     ..+.......+.  +..+   +...|..+|.+  ++|.|+..+|..++....  .
T Consensus        28 ~~l~~~F~~~D~d~~G~i~~-----~el~~~l~~~~~~~~~~~---~~~~~~~~d~~--~~g~i~~~eF~~~~~~~~~~~   97 (169)
T 3qrx_A           28 QEIREAFDLFDTDGSGTIDA-----KELKVAMRALGFEPKKEE---IKKMISEIDKD--GSGTIDFEEFLTMMTAKMGER   97 (169)
T ss_dssp             HHHHHHHHHHCTTCCSEECH-----HHHHHHHHHTSCCCCHHH---HHHHHHHHCSS--SSSSEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcH-----HHHHHHHHHcCCCCCHHH---HHHHHHHhcCC--CCCcCCHHHHHHHHHHHhccc
Confidence            34667777787878888877     888877766554  4544   45556667888  999999999998875421  1


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .....+..+|+.+|.+++|.|+.+||..++..+.. ..+++.+..+|+.+|.|++|.|+++||..++..
T Consensus        98 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  165 (169)
T 3qrx_A           98 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGE-NLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK  165 (169)
T ss_dssp             HHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTC-CCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred             CcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC-CCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            12345788999999999999999999999998765 567788999999999999999999999999854

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.54  E-value=6.9e-14  Score=111.01  Aligned_cols=132  Identities=17%  Similarity=0.283  Sum_probs=108.3

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--CC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--NK   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~~   81 (178)
                      .-|+.+|..+..+.++.++.     .++....+..++  +..+   +...|..+|.+  ++|.|+..||..++...  ..
T Consensus       302 ~ELREaF~~fDkDgdG~IS~-----eELk~aLrsLG~~~TeeE---I~~Lf~~~D~D--gDG~IdFeEFl~lms~~lk~~  371 (440)
T 3u0k_A          302 AEFKEAFSLFDKDGDGTITT-----KELGTVMRSLGQNPTEAE---LQDMINEVDAD--GDGTIDFPEFLIMMARKMKDT  371 (440)
T ss_dssp             HHHHHHHHHHCTTCSSEECH-----HHHHHHHHHTTCCCCHHH---HHHHHHHHCSS--CSSSEEHHHHHHHHHTC----
T ss_pred             HHHHHHHHHHcCCCCCEECH-----HHHHHHHHHcCCCCCHHH---HHHHHHHhCCC--CCCcCcHHHHHHHHHHHhcCC
Confidence            34778899999999999988     888887776544  5555   45566777888  99999999999887552  22


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      .....+..+|+.+|.+++|.|+.+||..++..+.. ...++++..+|+.+|.|++|.|+++||.++|
T Consensus       372 d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe-~LSdeEIdeLfke~D~DgDGkIsyeEFvkmM  437 (440)
T 3u0k_A          372 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-KLTDEEVDEMIREADIDGDGQVNYEEFVQMM  437 (440)
T ss_dssp             --CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTC-CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred             ChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHh
Confidence            23455788999999999999999999999998876 5678889999999999999999999999987

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=99.54  E-value=1.1e-13  Score=97.71  Aligned_cols=128  Identities=16%  Similarity=0.155  Sum_probs=99.8

Q ss_pred             ccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC---CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCC
Q 030405            7 GLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV---FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKE   83 (178)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~   83 (178)
                      .++.++..+..+.++.++.     ..+.......+   ++..++..   .|..+|.+  ++|.|+..+|..++...    
T Consensus         8 ~l~~~F~~~D~d~~G~i~~-----~e~~~~l~~~~~~~~~~~~~~~---l~~~~D~~--~~g~i~~~ef~~~~~~~----   73 (172)
T 2znd_A            8 FLWNVFQRVDKDRSGVISD-----TELQQALSNGTWTPFNPVTVRS---IISMFDRE--NKAGVNFSEFTGVWKYI----   73 (172)
T ss_dssp             HHHHHHHHHCTTCSSCEEH-----HHHHHHCCCSSSSCCCHHHHHH---HHHHHCSS--SSSEECHHHHHHHHHHH----
T ss_pred             HHHHHHHHhCCCCCCcCcH-----HHHHHHHHhcCCCCCCHHHHHH---HHHHhCCC--CCCcCCHHHHHHHHHHH----
Confidence            4566777777777777777     77777665543   56665544   46666777  89999999998876432    


Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                       ..+..+|+.+|.+++|.|+.+||..++..+.. ..+.+.+..+|+.+|.|++|.|+++||..++..
T Consensus        74 -~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  138 (172)
T 2znd_A           74 -TDWQNVFRTYDRDNSGMIDKNELKQALSGFGY-RLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV  138 (172)
T ss_dssp             -HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC-CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             -HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence             34688999999999999999999999887754 456778899999999999999999999988754

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.54  E-value=4.1e-14  Score=97.47  Aligned_cols=134  Identities=17%  Similarity=0.285  Sum_probs=105.8

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--C
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--N   80 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~   80 (178)
                      +..|+.+|..+..+.++.++.     ..+.......+  .+..+   +...|..+|.+  ++|.|+..+|..++...  .
T Consensus         9 ~~~l~~~F~~~D~d~~G~i~~-----~el~~~l~~~g~~~~~~~---~~~l~~~~d~~--~~g~i~~~eF~~~~~~~~~~   78 (148)
T 1exr_A            9 IAEFKEAFALFDKDGDGTITT-----KELGTVMRSLGQNPTEAE---LQDMINEVDAD--GNGTIDFPEFLSLMARKMKE   78 (148)
T ss_dssp             HHHHHHHHHHHCTTCSSEECH-----HHHHHHHHHHTCCCCHHH---HHHHHHHHCTT--CSSSEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcH-----HHHHHHHHHcCCCCCHHH---HHHHHHHHCCC--CCCcCcHHHHHHHHHhcccC
Confidence            345777888888888888877     77877766544  34544   45566777888  99999999999877442  1


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           81 KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        81 ~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      ......+..+|+.+|.+++|.|+.+||..++..+.. ..+++.+..+|+.+|.|++|.|+++||..++.
T Consensus        79 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~  146 (148)
T 1exr_A           79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE-KLTDDEVDEMIREADIDGDGHINYEEFVRMMV  146 (148)
T ss_dssp             HHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTC-CCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            122344678999999999999999999999988765 56778899999999999999999999998873

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=99.54  E-value=3.7e-15  Score=106.32  Aligned_cols=123  Identities=13%  Similarity=0.182  Sum_probs=91.0

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC------CCC-CHHHHHHH---------HHHHhcCCCCcccHH
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT------NKK-ESLFADRV---------FDLFDTKHNGILDFE  105 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~------~~~-~~~~~~~l---------f~~~d~~~~g~i~~~  105 (178)
                      +++.++++++..|..+|.+  ++|.|+..+|..++...      +.. ....+..+         |+.+|.+++|.|+++
T Consensus         8 l~~~~~~~l~~~F~~~D~d--~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~   85 (186)
T 2hps_A            8 ERAYHLRKMKTRMQRVDVT--GDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNA   85 (186)
T ss_dssp             HHHHHHHHHHHHHHTTCTT--CSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHHH
T ss_pred             ccHHHHHHHHHHhhhcCCC--CCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccHH
Confidence            4678899999999999999  99999999999988543      222 22334555         688898889999999


Q ss_pred             HHHHHHHhhCCCCChhHHHHHHH--HhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 030405          106 EFARALSIFHPNSPIDDKIEFSF--QLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL  172 (178)
Q Consensus       106 ef~~~~~~~~~~~~~~e~~~~~F--~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~  172 (178)
                      |  .++..........+.+..+|  +.||.|++|.|+.+||..++..+    |..++++++..++..+-
T Consensus        86 E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~----g~~~~~~~~~~~~~~~D  148 (186)
T 2hps_A           86 T--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAV----GPDLTDDKAITCFNTLD  148 (186)
T ss_dssp             H--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH----CTTCCHHHHHHHHHHHC
T ss_pred             H--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHh----CCCCCHHHHHHHHHHHc
Confidence            9  44444332111123455556  88899999999999999998876    77788888776665543

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=99.53  E-value=6.4e-14  Score=99.80  Aligned_cols=86  Identities=14%  Similarity=0.161  Sum_probs=41.8

Q ss_pred             HHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh----CCCCChhHHHHHHH
Q 030405           53 LFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF----HPNSPIDDKIEFSF  128 (178)
Q Consensus        53 ~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~----~~~~~~~e~~~~~F  128 (178)
                      .|..+|.+  ++|.|+..+|..++...     ..+..+|+.+| +++|.|+.+||..++..+    .. ..+++.++.++
T Consensus        51 l~~~~D~d--~~G~I~f~EF~~~~~~~-----~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~-~~~~~~~~~l~  121 (174)
T 2i7a_A           51 LVALMELK--VNGRLDQEEFARLWKRL-----VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGI-FISRELLHLVT  121 (174)
T ss_dssp             HHHHHCSS--CSSEECHHHHHHHHHHH-----HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTC-CCCHHHHHHHH
T ss_pred             HHHHHCCC--CCCcCCHHHHHHHHHHH-----HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCC-CCCHHHHHHHH
Confidence            33334444  55555555555443221     22345555555 555555555555555443    22 23344455555


Q ss_pred             HhhCCCCCCceeHHHHHHHH
Q 030405          129 QLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus       129 ~~~D~d~~G~I~~~e~~~~l  148 (178)
                      +.+| |++|.|+++||..++
T Consensus       122 ~~~d-d~dG~I~~~EF~~~~  140 (174)
T 2i7a_A          122 LRYS-DSVGRVSFPSLVCFL  140 (174)
T ss_dssp             HHHS-CTTSEECHHHHHHHH
T ss_pred             HHHc-CCCCeEcHHHHHHHH
Confidence            5555 555555555555554

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=99.53  E-value=6.4e-14  Score=100.19  Aligned_cols=125  Identities=21%  Similarity=0.305  Sum_probs=94.2

Q ss_pred             cCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcC
Q 030405           19 CDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTK   97 (178)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~   97 (178)
                      .++.++.     ..+..+..........-..+...|..+|.+  ++|.|+..+|..++.... ......+..+|+.+|.+
T Consensus        39 ~~G~i~~-----~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d--~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d  111 (190)
T 1fpw_A           39 PSGQLAR-----EDFVKIYKQFFPFGSPEDFANHLFTVFDKD--NNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLN  111 (190)
T ss_dssp             TTCCEEH-----HHHHHHHHHHCTTSCCSHHHHHHHHTCCSS--CSSEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSS
T ss_pred             CCCcCcH-----HHHHHHHHHHcCCCCcHHHHHHHHHHHCCC--CCCcEeHHHHHHHHHHHccCCcHHHHHHHHHHhcCC
Confidence            4555555     666665554311101112477889999999  999999999999886632 33456678999999999


Q ss_pred             CCCcccHHHHHHHHHhh----CC-------CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           98 HNGILDFEEFARALSIF----HP-------NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        98 ~~g~i~~~ef~~~~~~~----~~-------~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ++|.|+++||..++...    ..       .....+.+..+|+.+|.|++|.|+.+||..++..
T Consensus       112 ~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  175 (190)
T 1fpw_A          112 HDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV  175 (190)
T ss_dssp             CSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHS
T ss_pred             CCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            99999999999988764    11       1245678999999999999999999999999854

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.53  E-value=3.9e-13  Score=91.72  Aligned_cols=129  Identities=14%  Similarity=0.132  Sum_probs=104.5

Q ss_pred             cchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC---CC
Q 030405            8 LKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN---KK   82 (178)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~---~~   82 (178)
                      |+.+|..+..+.++.++.     ..+.......+  ++..++..+...      +  ++|.|+..+|..++....   ..
T Consensus         7 l~~~F~~~D~d~~G~i~~-----~e~~~~l~~~~~~~~~~~~~~~~~~------~--~~g~i~~~eF~~~~~~~~~~~~~   73 (145)
T 2bl0_B            7 IQECFQIFDKDNDGKVSI-----EELGSALRSLGKNPTNAELNTIKGQ------L--NAKEFDLATFKTVYRKPIKTPTE   73 (145)
T ss_dssp             HHHHHHHHCTTCSSCEEG-----GGHHHHHHHTTCCCCHHHHHHHHHH------H--TSSEECHHHHHHHHTSCCCCGGG
T ss_pred             HHHHHHHhCCCCcCccCH-----HHHHHHHHHhCCCCCHHHHHHHHHh------c--CCCeEcHHHHHHHHHHHhhcCcc
Confidence            567778888888888888     88888766654  456666655544      4  789999999999886532   22


Q ss_pred             CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           83 ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        83 ~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ....+..+|+.+|.+++|.|+.+||..++..+.. ....+.+..+|+.+|.|++|.|+++||..++..
T Consensus        74 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~-~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  140 (145)
T 2bl0_B           74 QSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGD-ALTSSEVEELMKEVSVSGDGAINYESFVDMLVT  140 (145)
T ss_dssp             GHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSS-CCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCC-CCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence            3456789999999999999999999999988765 467788999999999999999999999999865

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=99.53  E-value=9.3e-14  Score=98.99  Aligned_cols=133  Identities=14%  Similarity=0.189  Sum_probs=107.2

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCH
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES   84 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~   84 (178)
                      +..+..+|..+..+.++.++.     ..+.......++++.+   +...|..+|.+  ++|.|+..+|..++........
T Consensus        38 ~~~l~~~F~~~D~d~~G~i~~-----~El~~~l~~~g~~~~~---~~~~~~~~D~d--~~g~i~~~Ef~~~~~~~~~~~~  107 (180)
T 3mse_B           38 IKYINELFYKLDTNHNGSLSH-----REIYTVLASVGIKKWD---INRILQALDIN--DRGNITYTEFMAGCYRWKNIES  107 (180)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEH-----HHHHHHHHHTTCCHHH---HHHHHHHHCTT--CCSEECHHHHHHHHSCCTTC--
T ss_pred             HHHHHHHHHHhCCCCCCcCCH-----HHHHHHHHHcCCCHHH---HHHHHHHhCCC--CCCcCcHHHHHHHHHhcccCCH
Confidence            345677888888888888888     8899888888888644   66677777888  9999999999998866433333


Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCC--------CceeHHHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQ--------GFIERQEVKQMVVA  150 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~--------G~I~~~e~~~~l~~  150 (178)
                      ..+..+|+.+|.+++|.|+.+||..++..   ...+++.+..+|+.+|.|++        |.|+++||..+|..
T Consensus       108 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~---~~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~  178 (180)
T 3mse_B          108 TFLKAAFNKIDKDEDGYISKSDIVSLVHD---KVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS  178 (180)
T ss_dssp             CHHHHHHHHHCTTCSSCBCHHHHHHHTTT---SSCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHcC---CCCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence            55789999999999999999999999872   24667889999999999988        99999999998853

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=99.52  E-value=4.8e-14  Score=100.07  Aligned_cols=138  Identities=17%  Similarity=0.146  Sum_probs=108.6

Q ss_pred             cccchhhhhh-hcccCccccCCCCCCCcHHHHHhh------cCCCHHHHHHHH--------HHHHhhcccCCCCCcccHH
Q 030405            6 DGLKHFCVVV-VNCCDADLYKQPRGLEDPEALARE------TVFSVSEIEALY--------ELFKKISSAVIDDGLINKE   70 (178)
Q Consensus         6 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~l~--------~~F~~~d~~~~~~g~i~~~   70 (178)
                      .-+..+|..+ ..+.++.++.     .++......      ...+..++..+.        ..|..+|.+  ++|.|+..
T Consensus         8 ~~l~~~F~~~~D~d~dG~i~~-----~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d--~dG~I~~~   80 (185)
T 2sas_A            8 QKIKFTFDFFLDMNHDGSIQD-----NDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADIN--KDDVVSWE   80 (185)
T ss_dssp             HHHHHHHHHHTCTTCSSEECH-----HHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTT--CSSCEEHH
T ss_pred             HHHHHHHHHheeCCCCCeEcH-----HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCC--CCCeEcHH
Confidence            3466777777 7777888777     677654443      246777777775        449999999  99999999


Q ss_pred             HHHHHHhcCC----------CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCcee
Q 030405           71 EFQLALFKTN----------KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIE  140 (178)
Q Consensus        71 ef~~~l~~~~----------~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~  140 (178)
                      +|..++....          ......+..+|+.+|.+++|.|+++||..++..+.   .+.+.+..+|+.+|.|++|.|+
T Consensus        81 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g---~~~~~~~~~~~~~D~d~dG~i~  157 (185)
T 2sas_A           81 EYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ---LQCADVPAVYNVITDGGKVTFD  157 (185)
T ss_dssp             HHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC---CCCSSHHHHHHHHHTTTTSCCS
T ss_pred             HHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC---CCHHHHHHHHHHhcCCCCCcCc
Confidence            9998875421          11235678999999999999999999999987653   3467789999999999999999


Q ss_pred             HHHHHHHHHHHHh
Q 030405          141 RQEVKQMVVATLT  153 (178)
Q Consensus       141 ~~e~~~~l~~~~~  153 (178)
                      .+||..++...+.
T Consensus       158 ~~ef~~~~~~~~~  170 (185)
T 2sas_A          158 LNRYKELYYRLLT  170 (185)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999988753

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.52  E-value=3.7e-14  Score=101.13  Aligned_cols=136  Identities=15%  Similarity=0.211  Sum_probs=109.6

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC--
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK--   82 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~--   82 (178)
                      +.-++.+|..+.-+.++.++.     ..+.......+++..+ ..+...+..+|.+  ++|.++..+|..++......  
T Consensus        10 i~elk~~F~~~D~d~dG~I~~-----~El~~~l~~lg~~~~~-~~~~~~~~~~d~d--~~~~i~~~ef~~~~~~~~~~~~   81 (176)
T 2lhi_A           10 IAEFKEAFALFDKDNNGSISS-----SELATVMRSLGLSPSE-AEVNDLMNEIDVD--GNHQIEFSEFLALMSRQLKSND   81 (176)
T ss_dssp             GGHHHHHHHTTCSSCSSCBCH-----HHHHHHHHHHTCCCCH-HHHHHHHTTTCSS--CSSSBCTTHHHHHHTSSCCSSH
T ss_pred             HHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHHcCCChhH-HHHHHHHHHhCcC--CCccchHHHHHHHHHHhcccCC
Confidence            345677888888888888888     8888877776554222 3355667778888  99999999999887653322  


Q ss_pred             CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           83 ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        83 ~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ....+..+|+.||.+++|.|+.+||..++..+.. ..+++++..+|+.+| |++|.|+++||.++|.+
T Consensus        82 ~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~-~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k  147 (176)
T 2lhi_A           82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE-KLTDAEVDDMLREVS-DGSGEINIQQFAALLSK  147 (176)
T ss_dssp             HHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTC-CCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCc-ccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence            2345788999999999999999999999998776 567788999999999 99999999999999854

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=99.52  E-value=8.3e-14  Score=99.82  Aligned_cols=134  Identities=17%  Similarity=0.177  Sum_probs=98.4

Q ss_pred             chhhhhhhcc-cCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHH
Q 030405            9 KHFCVVVVNC-CDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLF   86 (178)
Q Consensus         9 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~   86 (178)
                      ..++..+... .++.++.     ..+..+..........-..+...|..+|.+  ++|.|+..+|..++.... ......
T Consensus        28 ~~~f~~fd~~~~~G~i~~-----~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d--~~g~i~~~Ef~~~~~~~~~~~~~~~  100 (193)
T 1bjf_A           28 QEWYKGFLRDCPSGHLSM-----EEFKKIYGNFFPYGDASKFAEHVFRTFDAN--GDGTIDFREFIIALSVTSRGKLEQK  100 (193)
T ss_dssp             HHHHHHHHHHSTTSEEEH-----HHHHHHHTTTSSSSCCHHHHHHHHHHHCSS--CSSEEEHHHHHHHHHHHTSSCHHHH
T ss_pred             HHHHHHHHHHCCCCCcCH-----HHHHHHHHHhcCcCChHHHHHHHHHHhCCC--CCCcCcHHHHHHHHHHHcCCCHHHH
Confidence            3444455444 4666666     677766555433221223467788888998  999999999999886633 333456


Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCC-----------CChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPN-----------SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~-----------~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      +..+|+.+|.+++|.|+++||..++..+...           ....+.+..+|+.+|.|++|.|+.+||..++.
T Consensus       101 ~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~  174 (193)
T 1bjf_A          101 LKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK  174 (193)
T ss_dssp             HHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHH
T ss_pred             HHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            7899999999999999999999988764110           02345689999999999999999999999984

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=99.52  E-value=5.7e-14  Score=99.96  Aligned_cols=121  Identities=16%  Similarity=0.196  Sum_probs=91.9

Q ss_pred             ccCccccCCCCCCCcHHHHHhhcC---CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHH
Q 030405           18 CCDADLYKQPRGLEDPEALARETV---FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDL   93 (178)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~   93 (178)
                      +.++.++.     ..+..+.....   .+..   .+...|..+|.+  ++|.|+..+|..++.... ......+..+|+.
T Consensus        31 d~~G~i~~-----~e~~~~l~~~~~~~~~~~---~~~~~f~~~D~d--~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~  100 (183)
T 1s6c_A           31 XPSGVVNE-----ETFKQIYAQFFPHGDAST---YAHYLFNAFDTT--QTGSVKFEDFVTALSILLRGTVHEKLRWTFNL  100 (183)
T ss_dssp             CTTSEECH-----HHHHHHHHHHSTTSCCHH---HHHHHHHHHCTT--CSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred             CCCCcCCH-----HHHHHHHHHHcCCCChHH---HHHHHHHHhCCC--CCCcEeHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            44556655     67777665543   3343   456678888888  999999999999876522 2334567899999


Q ss_pred             HhcCCCCcccHHHHHHHHHhh----CC-------CCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           94 FDTKHNGILDFEEFARALSIF----HP-------NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        94 ~d~~~~g~i~~~ef~~~~~~~----~~-------~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      +|.+++|.|+++||..++..+    ..       .....+.+..+|+.+|.|++|.|+++||..++
T Consensus       101 ~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~  166 (183)
T 1s6c_A          101 YDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESX  166 (183)
T ss_dssp             HCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHT
T ss_pred             hCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            999999999999999988765    21       01234779999999999999999999999987

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.52  E-value=1.5e-13  Score=94.50  Aligned_cols=132  Identities=17%  Similarity=0.130  Sum_probs=104.3

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--C
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--K   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~   81 (178)
                      ..+..+|..+..+.++.++.     ..+.......+  ++..++..   .|..+|.+  ++|.|+..+|..++....  .
T Consensus        11 ~~l~~~F~~~D~d~~G~i~~-----~el~~~l~~~~~~~~~~~~~~---l~~~~d~~--~~g~i~~~eF~~~~~~~~~~~   80 (153)
T 3ox6_A           11 EELREAFREFDKDKDGYINC-----RDLGNCMRTMGYMPTEMELIE---LSQQINMN--LGGHVDFDDFVELMGPKLLAE   80 (153)
T ss_dssp             HHHHHHHHHHHHHCSSSCCH-----HHHHHHHHHTTCCCCHHHHHH---HHHHHHTT--STTCCCHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhCCCCCCcCcH-----HHHHHHHHHcCCCCCHHHHHH---HHHHhCCC--CCccCcHHHHHHHHHHHhhcc
Confidence            45677788888888888877     88888776654  45555544   55555666  899999999999875421  1


Q ss_pred             C----CHHHHHHHHHHHhcCCCCcccHHHHHHHHHh-hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           82 K----ESLFADRVFDLFDTKHNGILDFEEFARALSI-FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        82 ~----~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~-~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      .    ....+..+|+.+|.+++|.|+.+||..++.. ... ..+.+.+..+|+.+|.|++|.|+++||..++
T Consensus        81 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  151 (153)
T 3ox6_A           81 TADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGH-QVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM  151 (153)
T ss_dssp             CHHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSS-CCCHHHHHHHHHHHCSSSSSSBCHHHHHHHT
T ss_pred             ccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcC-CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence            1    1345788999999999999999999999988 554 5677889999999999999999999999876

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.51  E-value=7.2e-14  Score=95.28  Aligned_cols=131  Identities=13%  Similarity=0.154  Sum_probs=105.5

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNK   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~   81 (178)
                      ..++.+|..+..+.++.++.     ..+.......+  ++..+   +...|..+|.+  ++|.|+..+|..++..  ...
T Consensus         6 ~~l~~~F~~~D~d~~G~i~~-----~el~~~l~~~~~~~~~~~---~~~l~~~~d~~--~~g~i~~~eF~~~~~~~~~~~   75 (142)
T 2bl0_C            6 SEFKEAFELFDSERTGFITK-----EGLQTVLKQFGVRVEPAA---FNEMFNEADAT--GNGKIQFPEFLSMMGRRMKQT   75 (142)
T ss_dssp             HHHHHHHHHHCTTCSSEEEH-----HHHHHHHHHHTCCCCHHH---HHHHHHHHCTT--CSSEEEHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhCCCCCCcCcH-----HHHHHHHHHhCCCCCHHH---HHHHHHHhCcC--CCCeeeHHHHHHHHHHHhcCC
Confidence            45677788888888888877     77777665544  45554   45566777888  8999999999998764  333


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      .....+..+|+.+|.+++|.|+.+||..++..+.. ..+.+.+..+|+.+| |++|.|+++||..++
T Consensus        76 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~  140 (142)
T 2bl0_C           76 TSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGD-RLKPHEFAEFLGITE-TEKGQIRYDNFINTM  140 (142)
T ss_dssp             CCHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSS-CCCHHHHHHHHHHHC-CSSSEECSHHHHTTT
T ss_pred             ChHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC-CCCHHHHHHHHHHhC-CCCCcEeHHHHHHHH
Confidence            45566899999999999999999999999988765 466788999999999 999999999998765

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=99.51  E-value=1.3e-13  Score=101.77  Aligned_cols=122  Identities=16%  Similarity=0.190  Sum_probs=93.2

Q ss_pred             cCccccCCCCCCCcHHHHHhhcC---CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHH
Q 030405           19 CDADLYKQPRGLEDPEALARETV---FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLF   94 (178)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~   94 (178)
                      .++.++.     ..+..+.....   .+..   .+...|..+|.+  ++|.|+..+|..++.... ......+..+|+.+
T Consensus        65 ~~G~I~~-----~E~~~~l~~l~~~~~~~~---~~~~~f~~~D~d--~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~  134 (224)
T 1s1e_A           65 PSGVVNE-----ETFKQIYAQFFPHGDAST---YAHYLFNAFDTT--QTGSVKFEDFVTALSILLRGTVHEKLRWTFNLY  134 (224)
T ss_dssp             TTSCBCH-----HHHHHHHHTTCTTSCCHH---HHHHHHHHHCTT--CSSCBCHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred             CCCCCCH-----HHHHHHHHHhcCCCCcHH---HHHHHHHHhcCC--CCCcEeHHHHHHHHHHHccCCHHHHHHHHHHHH
Confidence            4555555     67777665543   2333   456678888888  999999999999876522 23345678999999


Q ss_pred             hcCCCCcccHHHHHHHHHhh----CC-------CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           95 DTKHNGILDFEEFARALSIF----HP-------NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        95 d~~~~g~i~~~ef~~~~~~~----~~-------~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      |.+++|.|+++||..++..+    ..       .....+.+..+|+.+|.|++|.|+++||..++..
T Consensus       135 D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~  201 (224)
T 1s1e_A          135 DINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE  201 (224)
T ss_dssp             CTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHT
T ss_pred             cCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            99999999999999988764    21       1234578999999999999999999999999853

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=99.51  E-value=2.4e-13  Score=97.49  Aligned_cols=140  Identities=16%  Similarity=0.231  Sum_probs=105.9

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHH-----HHHhhcCCCHHHHH----HHHHHHHhhcccCCCCCcccHHHHHHH
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPE-----ALARETVFSVSEIE----ALYELFKKISSAVIDDGLINKEEFQLA   75 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~----~l~~~F~~~d~~~~~~g~i~~~ef~~~   75 (178)
                      +..++.+|..+..+.++.++.     ..+.     ...+..+.+....+    .+...|..+|.+  ++|.|+..+|..+
T Consensus        19 ~~~l~~~F~~~D~d~~G~i~~-----~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d--~~g~i~~~EF~~~   91 (195)
T 1qv0_A           19 IKRHKHMFDFLDINGNGKITL-----DEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGME--YGKEIAFPQFLDG   91 (195)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCH-----HHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCC--TTCCBCHHHHHHH
T ss_pred             HHHHHHHHhHcCCCCCCcCcH-----HHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCC--CCceEcHHHHHHH
Confidence            345677888888888888877     7787     45555666654432    577888889998  9999999999987


Q ss_pred             HhcCC--------CCCH----HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHH
Q 030405           76 LFKTN--------KKES----LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQE  143 (178)
Q Consensus        76 l~~~~--------~~~~----~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e  143 (178)
                      +....        ....    ..+..+|+.+|.+++|.|+.+||..++..+.. ....+.+..+|+.+|.|++|.|+++|
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~-~~~~~~~~~~~~~~D~d~dg~i~~~e  170 (195)
T 1qv0_A           92 WKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGI-SPSQEDCEATFRHCDLDNAGDLDVDE  170 (195)
T ss_dssp             HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSS-CCCHHHHHHHHHHSCCCTTSCEEHHH
T ss_pred             HHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcCCHHH
Confidence            64311        1111    12338999999999999999999999988865 45678899999999999999999999


Q ss_pred             HHHHHHHHH
Q 030405          144 VKQMVVATL  152 (178)
Q Consensus       144 ~~~~l~~~~  152 (178)
                      |..++...+
T Consensus       171 F~~~~~~~~  179 (195)
T 1qv0_A          171 MTRQHLGFW  179 (195)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHc
Confidence            999998764

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=99.51  E-value=1.3e-13  Score=98.51  Aligned_cols=132  Identities=16%  Similarity=0.175  Sum_probs=99.3

Q ss_pred             chhhhhhhcc-cCccccCCCCCCCcHHHHHhhc---CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCC
Q 030405            9 KHFCVVVVNC-CDADLYKQPRGLEDPEALARET---VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKE   83 (178)
Q Consensus         9 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~   83 (178)
                      ..++..+... .++.++.     ..+..+....   ..+..   .+...|..+|.+  ++|.|+..+|..++.... ...
T Consensus        28 ~~~f~~fd~~~~~G~i~~-----~e~~~~l~~~~~~~~~~~---~~~~~f~~~D~d--~~g~i~~~ef~~~~~~~~~~~~   97 (190)
T 1g8i_A           28 QQWYKGFIKDCPSGQLDA-----AGFQKIYKQFFPFGDPTK---FATFVFNVFDEN--KDGRIEFSEFIQALSVTSRGTL   97 (190)
T ss_dssp             HHHHHHHHHHCTTSEEEH-----HHHHHHHHHHCTTSCTHH---HHHHHHHHHCTT--CSSEEEHHHHHHHHHHHHHCCH
T ss_pred             HHHHHHHHHhCCCCcCCH-----HHHHHHHHHhCCCCChHH---HHHHHHHHHhcC--CCCeEeHHHHHHHHHHhcCCCH
Confidence            3444445444 4566666     6777765543   33333   477788888988  999999999999876532 233


Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhh----C-------CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIF----H-------PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~----~-------~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ...+..+|+.+|.+++|.|+++||..++..+    .       ......+.+..+|+.+|.|++|.|+.+||..++..
T Consensus        98 ~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~  175 (190)
T 1g8i_A           98 DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA  175 (190)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence            4567899999999999999999999988763    1       11345678999999999999999999999999854

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=99.51  E-value=2.8e-13  Score=96.68  Aligned_cols=140  Identities=12%  Similarity=0.169  Sum_probs=110.9

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHH-----HHHhhcCCCHHHHH----HHHHHHHhhcccCCCCCcccHHHHHHHH
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPE-----ALARETVFSVSEIE----ALYELFKKISSAVIDDGLINKEEFQLAL   76 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~----~l~~~F~~~d~~~~~~g~i~~~ef~~~l   76 (178)
                      ..++.+|..+..+.++.++.     .++.     ......+.....-+    .+...|..+|.+  ++|.|+..+|..++
T Consensus        16 ~~l~~~F~~~D~d~~G~i~~-----~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d--~~g~i~~~EF~~~~   88 (191)
T 1uhk_A           16 GRHKHMFNFLDVNHNGKISL-----DEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMK--YGVETDWPAYIEGW   88 (191)
T ss_dssp             HHHHHHHHHHCTTCCSEEEH-----HHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCC--TTCEEEHHHHHHHH
T ss_pred             HHHHHHHhhccCCCCCcCcH-----HHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcC--CCCcCcHHHHHHHH
Confidence            45677888888888888887     8887     56666666655432    577888889998  99999999999876


Q ss_pred             hcC---------CCCC---HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHH
Q 030405           77 FKT---------NKKE---SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEV  144 (178)
Q Consensus        77 ~~~---------~~~~---~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~  144 (178)
                      ...         ....   ..+++.+|+.+|.+++|.|+.+||..++..+.. ....+.+..+|+.+|.|++|.|+++||
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~-~~~~~~~~~~~~~~D~d~dG~i~~~eF  167 (191)
T 1uhk_A           89 KKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGI-IQSSEDCEETFRVCDIDESGQLDVDEM  167 (191)
T ss_dssp             HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTS-CCSHHHHHHHHHHSCCCTTSCEEHHHH
T ss_pred             HHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcCcHHHH
Confidence            431         1111   122348999999999999999999999988765 456788999999999999999999999


Q ss_pred             HHHHHHHHh
Q 030405          145 KQMVVATLT  153 (178)
Q Consensus       145 ~~~l~~~~~  153 (178)
                      ..++...+.
T Consensus       168 ~~~~~~~~~  176 (191)
T 1uhk_A          168 TRQHLGFWY  176 (191)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhc
Confidence            999988753

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=99.51  E-value=1e-13  Score=94.77  Aligned_cols=132  Identities=14%  Similarity=0.194  Sum_probs=104.8

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--C
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--N   80 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~   80 (178)
                      +..|..++..+..+.++.++.     ..+.......+  ++..+   +...|..+|.+  ++|.|+..+|..++...  .
T Consensus        10 ~~~l~~~F~~~D~~~~G~i~~-----~e~~~~l~~~~~~~~~~~---~~~l~~~~d~~--~~g~i~~~ef~~~~~~~~~~   79 (147)
T 4ds7_A           10 IAEFKEAFALFDKDNSGSISA-----SELATVMRSLGLSPSEAE---VADLMNEIDVD--GNHAIEFSEFLALMSRQLKC   79 (147)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEH-----HHHHHHHHHTTCCCCHHH---HHHHHHHHCTT--SSSEEEHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHCCCCCCCcCH-----HHHHHHHHHhCCCCCHHH---HHHHHHHhccC--CCCcCcHHHHHHHHHHhccC
Confidence            345677788888888888877     78887766654  45555   44556666777  89999999999987542  1


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           81 KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        81 ~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ......+..+|+.+|.+++|.|+.+||..++..+.. ..+++.+..+|+.+| |++|.|+++||..++
T Consensus        80 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l  145 (147)
T 4ds7_A           80 NDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE-KLTDAEVDEMLREVS-DGSGEINIKQFAALL  145 (147)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC-CCCHHHHHHHHHHHS-SSCSSEEHHHHHHHT
T ss_pred             CCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCC-CCCHHHHHHHHHHhc-CCCCcCcHHHHHHHH
Confidence            222345788999999999999999999999988765 567788999999999 999999999999886

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=99.51  E-value=1.5e-13  Score=117.08  Aligned_cols=117  Identities=17%  Similarity=0.283  Sum_probs=101.7

Q ss_pred             CCCHHH-HHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC---------CCCCHHHHHHHHHHHhcCCCCcccHHHHHHH
Q 030405           41 VFSVSE-IEALYELFKKISSAVIDDGLINKEEFQLALFKT---------NKKESLFADRVFDLFDTKHNGILDFEEFARA  110 (178)
Q Consensus        41 ~~~~~~-i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~---------~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~  110 (178)
                      .+++++ ++.++..|..+| +  ++|.|+..||..++...         .......++.+|..+|.+++|.|+|+||..+
T Consensus       524 ~ls~~e~~~~l~~~F~~~D-d--~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l  600 (714)
T 3bow_A          524 EANEEDIGDGFRRLFAQLA-G--EDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYIL  600 (714)
T ss_dssp             CCSGGGCCHHHHHHHHHHH-G--GGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHH
T ss_pred             CCChhhHHHHHHHHHHHHc-C--CCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence            477788 899999999999 8  99999999999998663         2334567899999999999999999999999


Q ss_pred             HHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          111 LSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       111 ~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      +..+       +.++.+|+.||.|++|.|+.+||..+|..+    |..+++++++.++..+
T Consensus       601 ~~~~-------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~----G~~ls~~~~~~l~~~~  650 (714)
T 3bow_A          601 WTKI-------QKYQKIYREIDVDRSGTMNSYEMRKALEEA----GFKLPCQLHQVIVARF  650 (714)
T ss_dssp             HHHH-------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHT----TEECCHHHHHHHHHHH
T ss_pred             HHHH-------HHHHHHHHHhCCCCCCeECHHHHHHHHHHc----CCCCCHHHHHHHHHHh
Confidence            8764       679999999999999999999999999776    7788998888777665

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=99.50  E-value=1.5e-13  Score=94.79  Aligned_cols=133  Identities=14%  Similarity=0.118  Sum_probs=102.0

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--CCC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--KKE   83 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~~~   83 (178)
                      .-|+.+|..+..+.++.++.     ..+..+.... .++    .+...|..+|.+  ++|.|+..+|..++....  ...
T Consensus         6 ~~l~~~F~~~D~d~~G~i~~-----~el~~l~~~~-~~~----~~~~~~~~~D~~--~~g~i~~~ef~~~~~~~~~~~~~   73 (155)
T 3ll8_B            6 KRLGKRFKKLDLDNSGSLSV-----EEFMSLPELQ-QNP----LVQRVIDIFDTD--GNGEVDFKEFIEGVSQFSVKGDK   73 (155)
T ss_dssp             HHHHHHHHHHCTTCSSSBCH-----HHHTTSGGGT-TCT----THHHHHHHHCTT--CSSSBCHHHHHHHHGGGCSSCCH
T ss_pred             HHHHHHHHHhCcCCCCeEcH-----HHHHHhhccc-cch----HHHHHHHHHCCC--CCCcCcHHHHHHHHHHHcccCCH
Confidence            45667777887778888777     6664333322 222    466778888888  999999999999886632  233


Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhh-CCCCChhHHHHHHHHh----hCCCCCCceeHHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIF-HPNSPIDDKIEFSFQL----YDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~-~~~~~~~e~~~~~F~~----~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ...+..+|+.+|.+++|.|+.+||..++... .. ....+.+..+|+.    +|.|++|.|+++||..++..+
T Consensus        74 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~  145 (155)
T 3ll8_B           74 EQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN-NLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL  145 (155)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGG-GSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGG
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence            4568899999999999999999999999873 43 4556667777777    999999999999999998664

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.50  E-value=1.2e-13  Score=95.80  Aligned_cols=132  Identities=11%  Similarity=0.129  Sum_probs=104.6

Q ss_pred             cccchhhhhhh-cccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--
Q 030405            6 DGLKHFCVVVV-NCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--   80 (178)
Q Consensus         6 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--   80 (178)
                      .-++.+|..+. .+.++.++.     ..+.......+  ++..+   +...|..+|.+  ++|.|+..+|..++....  
T Consensus        13 ~~l~~~F~~~D~~~~~G~i~~-----~e~~~~l~~~~~~~~~~~---~~~l~~~~D~~--~~g~i~~~eF~~~~~~~~~~   82 (158)
T 2jnf_A           13 KLLETAFRDFETPEGSGRVST-----DQIGIILEVLGIQQTKST---IRQLIDEFDPF--GNGDIDFDSFKIIGARFLGE   82 (158)
T ss_dssp             HHHHHHHHHSBCSSSCSSEEH-----HHHHHHHHHTTCSCSHHH---HHHHHHHHCTT--CCSEECHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHhCCCCCCCcCcH-----HHHHHHHHHhCCCCCHHH---HHHHHHHhCCC--CCCcCcHHHHHHHHHHHhcc
Confidence            34566777777 777788877     78887766544  44555   45666667888  899999999999875521  


Q ss_pred             C----CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           81 K----KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        81 ~----~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      .    .....+..+|+.+|.+++|.|+.+||..++..+.. ..+.+.+..+|+.+|.|++|.|+++||..++
T Consensus        83 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~  153 (158)
T 2jnf_A           83 EVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDE-TLSSEDLDAMIDEIDADGSGTVDFEEFMGVM  153 (158)
T ss_dssp             CCCTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCT-TCCHHHHHHHHHHHCSSCCSEECSHHHHHHT
T ss_pred             ccchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCC-cCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            1    22344789999999999999999999999988765 4667889999999999999999999999886

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=99.50  E-value=1.9e-13  Score=99.27  Aligned_cols=134  Identities=13%  Similarity=0.196  Sum_probs=98.3

Q ss_pred             hhhhhhhcc-cCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHH
Q 030405           10 HFCVVVVNC-CDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFA   87 (178)
Q Consensus        10 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~   87 (178)
                      .++..+... .++.++.     ..+..+..........-..+...|..+|.+  ++|.|+..+|..++.... ......+
T Consensus        37 ~~f~~~d~~~~~G~i~~-----~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d--~~G~i~~~Ef~~~~~~~~~~~~~~~~  109 (207)
T 2d8n_A           37 SWYQSFLKDCPTGRITQ-----QQFQSIYAKFFPDTDPKAYAQHVFRSFDSN--LDGTLDFKEYVIALHMTTAGKTNQKL  109 (207)
T ss_dssp             HHHHHHHHHCTTSEEEH-----HHHHHHHHHTCTTSCCHHHHHHHHHHHCTT--CCSEEEHHHHHHHHHHHSCSSSSTTH
T ss_pred             HHHHHHHhhCCCCCCCH-----HHHHHHHHHhccCCCcHHHHHHHHHHhcCC--CCCeEeHHHHHHHHHHHcCCCHHHHH
Confidence            344444444 3566655     667776655432111124577888888988  999999999999886532 2334457


Q ss_pred             HHHHHHHhcCCCCcccHHHHHHHHHhh----C----CC-----CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           88 DRVFDLFDTKHNGILDFEEFARALSIF----H----PN-----SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        88 ~~lf~~~d~~~~g~i~~~ef~~~~~~~----~----~~-----~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ..+|+.+|.+++|.|+++||..++..+    .    ..     ....+.+..+|+.+|.|++|.|+++||..++..
T Consensus       110 ~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  185 (207)
T 2d8n_A          110 EWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLA  185 (207)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHh
Confidence            899999999999999999999988765    2    10     123467999999999999999999999999864

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=99.50  E-value=1.7e-13  Score=95.22  Aligned_cols=134  Identities=18%  Similarity=0.239  Sum_probs=106.3

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--C
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--K   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~   81 (178)
                      ..+..+|..+..+.++.++.     ..+.......+  ++..++   ...|..+|.+  ++|.|+..+|..++....  .
T Consensus        20 ~~l~~~F~~~D~d~~G~i~~-----~e~~~~l~~~~~~~~~~~~---~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~~~   89 (162)
T 1top_A           20 AEFKAAFDMFDADGGGDIST-----KELGTVMRMLGQNPTKEEL---DAIIEEVDED--GSGTIDFEEFLVMMVRQMKED   89 (162)
T ss_dssp             HHHHHHHHTTTCSCSSEEEG-----GGHHHHHHHTTCCCCHHHH---HHHHHHHCTT--SCCEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCCH-----HHHHHHHHHcCCCCCHHHH---HHHHHHHcCC--CCCcEeHHHHHHHHHHHhccc
Confidence            45667787888778888877     88888777654  455554   4566677887  899999999998875421  1


Q ss_pred             C---CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           82 K---ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        82 ~---~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .   ....+..+|+.+|.+++|.|+.+||..++..+.. ..+.+.+..+|+.+|.|++|.|+++||..++..
T Consensus        90 ~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~-~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  160 (162)
T 1top_A           90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGE-HVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG  160 (162)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTC-CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred             cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence            1   2345788999999999999999999999987764 466788999999999999999999999998853

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=99.50  E-value=4.6e-13  Score=87.64  Aligned_cols=100  Identities=20%  Similarity=0.274  Sum_probs=82.2

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh---CCCC
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF---HPNS  118 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~---~~~~  118 (178)
                      ++.++++.+..   .+|    ++|.|+..+|..++... ......+..+|+.+|.+++|.|+.+||..++..+   .. .
T Consensus         6 ~s~~ei~~~~~---~~d----~~g~i~~~eF~~~~~~~-~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~-~   76 (109)
T 5pal_A            6 LKADDINKAIS---AFK----DPGTFDYKRFFHLVGLK-GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR-D   76 (109)
T ss_dssp             SCHHHHHHHHH---HTC----STTCCCHHHHHHHHTCT-TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCC-C
T ss_pred             CCHHHHHHHHH---HhC----CCCcCcHHHHHHHHhhc-cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCC-C
Confidence            56666555554   445    46899999999987553 3345668999999999999999999999999887   44 5


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .+.+.++.+|+.+|.|++|.|+++||..++..
T Consensus        77 ~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 5pal_A           77 LNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            67788999999999999999999999998854

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=99.49  E-value=6.9e-14  Score=104.95  Aligned_cols=142  Identities=12%  Similarity=0.264  Sum_probs=104.8

Q ss_pred             cHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc---------CCCCC-----HHHHHHHHHHHhcC
Q 030405           32 DPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK---------TNKKE-----SLFADRVFDLFDTK   97 (178)
Q Consensus        32 ~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~---------~~~~~-----~~~~~~lf~~~d~~   97 (178)
                      .++.+++...+.--.+..+.+.|....-+ .++..++..++..+|..         .....     +..++.+|+.||.+
T Consensus        66 klr~lq~~~~l~lv~l~~~~~~f~~~~l~-~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~  144 (261)
T 1eg3_A           66 KLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTG  144 (261)
T ss_dssp             HHHHHHHHTTGGGCCHHHHHHHHHHTTCC-CTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTT
T ss_pred             hhHhhhhhheeceeeHHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCC
Confidence            34455555555555567778888775433 14457888888776522         11111     34578899999999


Q ss_pred             CCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh---hcCC--CCCHHHHHHHHHHHH
Q 030405           98 HNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT---ESGM--NLSDDVIESIIDKVL  172 (178)
Q Consensus        98 ~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~---~~~~--~l~~~~~~~~~~~~~  172 (178)
                      ++|.|+|.||+.++..+.+ +..+++++++|++|| |++|+|+++|+..+++.+++   +.|+  .+....++..++.+|
T Consensus       145 ~~G~I~f~ef~~aLs~l~r-G~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F  222 (261)
T 1eg3_A          145 RTGRIRVLSFKTGIISLCK-AHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCF  222 (261)
T ss_dssp             CCSEEEHHHHHHHHHHTSS-SCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHH
T ss_pred             CCceEeHHHHHHHHHHHcC-CCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHH
Confidence            9999999999999999887 889999999999999 99999999999999987643   3443  122234677888888


Q ss_pred             hhcc
Q 030405          173 SLIQ  176 (178)
Q Consensus       173 ~~~D  176 (178)
                      +.+|
T Consensus       223 ~~~d  226 (261)
T 1eg3_A          223 QFAN  226 (261)
T ss_dssp             HHTT
T ss_pred             HhCC
Confidence            8775

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=99.49  E-value=1.5e-13  Score=98.23  Aligned_cols=136  Identities=16%  Similarity=0.142  Sum_probs=104.4

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhc-----------CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHH
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARET-----------VFSVSEIEALYELFKKISSAVIDDGLINKEEFQL   74 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~   74 (178)
                      ..+..+|..+..+.++.++.     .++.......           +. ...-..+...|..+|.+  ++|.|+..+|..
T Consensus        40 ~~l~~~F~~~D~d~~G~i~~-----~e~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~D~d--~~g~i~~~ef~~  111 (191)
T 3khe_A           40 KELTQIFRQLDNNGDGQLDR-----KELIEGYRKLMQWKGDTVSDLDS-SQIEAEVDHILQSVDFD--RNGYIEYSEFVT  111 (191)
T ss_dssp             HHHHHHHHHHCTTCSSEECH-----HHHHHHHHHHHC-----CCHHHH-HHHHHHHHHHHHHTCTT--CSSSEEHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCCCcH-----HHHHHHHHHHHhhcccccccccc-hhhHHHHHHHHHHhCCC--CCCcCCHHHHHH
Confidence            44666777777777777766     6666654432           11 11234567778888988  999999999999


Q ss_pred             HHhcC-CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           75 ALFKT-NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        75 ~l~~~-~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      ++... .......+..+|+.+|.+++|.|+++||..++.  . ...+++.+..+|+.+|.|++|.|+++||..++..++
T Consensus       112 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~-~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~  187 (191)
T 3khe_A          112 VCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--V-TEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKIC  187 (191)
T ss_dssp             HHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--S-SCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred             HHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--c-CCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            87442 223345678999999999999999999999887  2 256778899999999999999999999999998763

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.49  E-value=6.8e-13  Score=93.03  Aligned_cols=132  Identities=14%  Similarity=0.146  Sum_probs=103.6

Q ss_pred             ccchhhhhhhc--ccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC---
Q 030405            7 GLKHFCVVVVN--CCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT---   79 (178)
Q Consensus         7 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~---   79 (178)
                      -++.+|..+.-  +.++.++.     ..+..+.+..++  +..++..+.    ..+.+  ++|.|+..+|..++...   
T Consensus        10 elre~F~~fD~~~d~dG~I~~-----~El~~~lr~lG~~~t~~el~~~~----~~d~~--~~g~i~f~eFl~~~~~~~~~   78 (159)
T 3i5g_C           10 EVREVFDLFDFWDGRDGDVDA-----AKVGDLLRCLGMNPTEAQVHQHG----GTKKM--GEKAYKLEEILPIYEEMSSK   78 (159)
T ss_dssp             HHHHHHHHHHHHTTSSSCEEG-----GGHHHHHHHTTCCCCHHHHHTTT----CCSST--TSCEECHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHCcCCCCCCeECH-----HHHHHHHHHcCCCCCHHHHHHHH----ccccc--CCCcccHHHHHHHHHHhhcc
Confidence            46677777763  56677877     889888877655  566665542    23555  78999999999887541   


Q ss_pred             -CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCC--CCCCceeHHHHHHHHHH
Q 030405           80 -NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDL--KQQGFIERQEVKQMVVA  150 (178)
Q Consensus        80 -~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~--d~~G~I~~~e~~~~l~~  150 (178)
                       .......+..+|+.+|.+++|.|+.++|..++..+.. ..+++++..+++.+|.  |++|.|+++||.++|.+
T Consensus        79 ~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~-~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~  151 (159)
T 3i5g_C           79 DTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGE-RITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA  151 (159)
T ss_dssp             CTTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSS-CCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHC
Confidence             2233456788999999999999999999999998876 5678889999999995  88999999999998854

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.48  E-value=5.5e-14  Score=101.80  Aligned_cols=137  Identities=20%  Similarity=0.235  Sum_probs=95.8

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-CCCCC
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKE   83 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~~~   83 (178)
                      +..|..+|..+..+.++.++.     ..+.......+... .-..+...|..+|.+  ++|.|+..+|..++.. .....
T Consensus        56 ~~~l~~~F~~~D~d~~G~Is~-----~El~~~l~~~g~~~-~~~~~~~l~~~~D~d--~~g~I~~~EF~~~~~~~~~~~~  127 (197)
T 3pm8_A           56 INNLRNIFIALDVDNSGTLSS-----QEILDGLKKIGYQK-IPPDIHQVLRDIDSN--ASGQIHYTDFLAATIDKQTYLK  127 (197)
T ss_dssp             HHHHHHHHHHHCTTCSSEECH-----HHHHHHHHHHC-----CHHHHHHHHC---------CEEHHHHHHTTCCHHHHCS
T ss_pred             HHHHHHHHHHHCCCCCCcCCH-----HHHHHHHHHhCCCC-CHHHHHHHHHHhCCC--CCCeEcHHHHHHHHHHHHhhhh
Confidence            345677777787778888877     77777666544421 113456667777877  8999999999887644 12233


Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC-CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHP-NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~-~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      ...+..+|+.+|.+++|.|+.+||..++..... ....++.+..+|+.+|.|++|.|+++||..+|.
T Consensus       128 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~  194 (197)
T 3pm8_A          128 KEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMS  194 (197)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence            556789999999999999999999999976621 134567799999999999999999999999885

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=99.48  E-value=3.3e-13  Score=99.94  Aligned_cols=117  Identities=16%  Similarity=0.196  Sum_probs=88.5

Q ss_pred             CcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC-CCCCHHHHHHHHHHHhcCCCCcccHHHHHH
Q 030405           31 EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT-NKKESLFADRVFDLFDTKHNGILDFEEFAR  109 (178)
Q Consensus        31 ~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~-~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~  109 (178)
                      ..+........-....-..+...|..+|.+  ++|.|+..+|..++... .......+..+|+.+|.+++|.|+++||..
T Consensus        85 ~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d--~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~  162 (229)
T 3dd4_A           85 ETFKEIYSQFFPQGDSTTYAHFLFNAFDTD--HNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLD  162 (229)
T ss_dssp             HHHHHHHHHHSCSSSHHHHHHHHHHTTCSS--CCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHH
T ss_pred             HHHHHHHHHHCCCCCcHHHHHHHHHHcCCC--CCCeEeHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHH
Confidence            666665554211111223466788889999  99999999999987652 223345678999999999999999999999


Q ss_pred             HHHhhC-----------CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405          110 ALSIFH-----------PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus       110 ~~~~~~-----------~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      ++..+.           ......+.+..+|+.+|.|++|.|+++||..++.
T Consensus       163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~  213 (229)
T 3dd4_A          163 IMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQ  213 (229)
T ss_dssp             HHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHH
T ss_pred             HHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHH
Confidence            987651           1134457899999999999999999999999984

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=99.48  E-value=1.3e-13  Score=92.68  Aligned_cols=127  Identities=17%  Similarity=0.177  Sum_probs=97.5

Q ss_pred             chhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc----CCCCCH
Q 030405            9 KHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK----TNKKES   84 (178)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~----~~~~~~   84 (178)
                      +.++..+..+.++.++.     .++.......+.... -..+...|..+|.+  ++|.|+..+|..++..    ......
T Consensus         3 ~~~F~~~D~~~~g~i~~-----~e~~~~l~~~~~~~~-~~~~~~~~~~~D~~--~~g~i~~~ef~~~~~~~~~~~~~~~~   74 (134)
T 1jfj_A            3 EALFKEIDVNGDGAVSY-----EEVKAFVSKKRAIKN-EQLLQLIFKSIDAD--GNGEIDQNEFAKFYGSIQGQDLSDDK   74 (134)
T ss_dssp             HHHHHHHCTTCSSEEEH-----HHHHHHHHTTCCSSH-HHHHHHHHHHHCSS--CCSEEEHHHHHHHTTCSSCCSSHHHH
T ss_pred             HHHHHHHCCCCCCcCCH-----HHHHHHHHHcCCCCC-HHHHHHHHHHHcCC--CCCeEcHHHHHHHHHHhcccccCCCH
Confidence            45666666677777777     777777666544322 24567778888888  9999999999998852    111223


Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ..+..+|+.+|.+++|.|+++||..++..+..   ..  +..+|+.+|.|++|.|+.+||..++
T Consensus        75 ~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~---~~--~~~~~~~~D~~~dg~i~~~ef~~~l  133 (134)
T 1jfj_A           75 IGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI---EK--VAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTC---HH--HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCccCHHHHHHHHHHhCH---HH--HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence            44789999999999999999999999976532   22  8899999999999999999999875

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=99.48  E-value=5.1e-13  Score=87.44  Aligned_cols=101  Identities=19%  Similarity=0.229  Sum_probs=82.2

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC--CCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFH--PNS  118 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~--~~~  118 (178)
                      .++.+++..+...+   |    ++|.|+..+|..++... ......+..+|+.+|.+++|.|+.+||..++..+.  ...
T Consensus         6 ~~~~~ei~~~~~~~---D----~~g~i~~~eF~~~~~~~-~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~   77 (109)
T 3fs7_A            6 ILSAKDIESALSSC---Q----AADSFNYKSFFSTVGLS-SKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARV   77 (109)
T ss_dssp             TSCHHHHHHHHHHT---C----STTCCCHHHHHHHHTCT-TCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCC
T ss_pred             cCCHHHHHHHHHhc---C----CCCcCcHHHHHHHHhcC-CCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhccccc
Confidence            36676766555554   4    57999999999987653 33456689999999999999999999999998873  225


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .+.+.++.+|+.+|.|++|.|+++||..+++
T Consensus        78 ~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           78 LTSAETKAFLAAGDTDGDGKIGVEEFQSLVK  108 (109)
T ss_dssp             CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred             CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            6678899999999999999999999999873

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=99.47  E-value=5.1e-14  Score=109.60  Aligned_cols=112  Identities=17%  Similarity=0.264  Sum_probs=91.3

Q ss_pred             HHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHH-HHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHH
Q 030405           47 IEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADR-VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIE  125 (178)
Q Consensus        47 i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~-lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~  125 (178)
                      ...+...|..+|.+  ++|+|+..+|..++ .........+.. +|..+|.+++|.|+|.+|..++....       .+.
T Consensus       187 ~~~l~~~F~~~D~d--~dG~Is~~El~~~l-~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~-------~l~  256 (323)
T 1ij5_A          187 LAALVADFRKIDTN--SNGTLSRKEFREHF-VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL-------VLR  256 (323)
T ss_dssp             HHTSCCCHHHHCTT--CCSEECHHHHHHHH-HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH-------HHH
T ss_pred             HHHHHHHHHHHCCC--CCCcCcHHHHHHHH-cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH-------HHH
Confidence            34556678888988  99999999999988 322333456788 99999999999999999999887653       689


Q ss_pred             HHHHhhCCCCCCceeHHHHHHHH-HHHHhhcCCCCCHHHHHHHHHHHH
Q 030405          126 FSFQLYDLKQQGFIERQEVKQMV-VATLTESGMNLSDDVIESIIDKVL  172 (178)
Q Consensus       126 ~~F~~~D~d~~G~I~~~e~~~~l-~~~~~~~~~~l~~~~~~~~~~~~~  172 (178)
                      .+|+.||.|++|+|+.+||..++ ..+    |.++++.++..++..+-
T Consensus       257 ~~F~~~D~d~dG~Is~~El~~~l~~~~----g~~ls~~e~~~l~~~~D  300 (323)
T 1ij5_A          257 ILYAFADFDKSGQLSKEEVQKVLEDAH----IPESARKKFEHQFSVVD  300 (323)
T ss_dssp             HHHHHTCSSSCSSEEHHHHHHHHHHTT----CCGGGCSTHHHHHHHHT
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHHHc----CCCCCHHHHHHHHHHHC
Confidence            99999999999999999999998 654    76777777766665543

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=99.47  E-value=5.2e-13  Score=92.45  Aligned_cols=134  Identities=16%  Similarity=0.117  Sum_probs=108.7

Q ss_pred             ccccchhhhhhhc--ccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC
Q 030405            5 LDGLKHFCVVVVN--CCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN   80 (178)
Q Consensus         5 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~   80 (178)
                      +..|+.+|..+..  +.++.++.     ..+.......+  .+..++..+    ..+|.+  ++|.|+..+|..++....
T Consensus         8 ~~~l~~~F~~~D~~~d~~G~i~~-----~el~~~l~~~g~~~~~~~~~~l----~~~D~~--~~g~i~~~eF~~~~~~~~   76 (156)
T 1wdc_C            8 IDDLKDVFELFDFWDGRDGAVDA-----FKLGDVCRCLGINPRNEDVFAV----GGTHKM--GEKSLPFEEFLPAYEGLM   76 (156)
T ss_dssp             HHHHHHHHHHHHHHTCSSSCEEG-----GGHHHHHHHTTCCCCHHHHHHT----TCCSST--TSCEECHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHccCCCCCCCCcH-----HHHHHHHHHcCCCCCHHHHHHH----HhhCCC--CCCeeeHHHHHHHHHHHh
Confidence            3456778888887  88888888     88888776654  455565555    556777  899999999999876532


Q ss_pred             ---CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHh--hCCCCCCceeHHHHHHHHHH
Q 030405           81 ---KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQL--YDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        81 ---~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~--~D~d~~G~I~~~e~~~~l~~  150 (178)
                         ......+..+|+.+|.+++|.|+.+||..++..+.. ....+.+..+|+.  +|.|++|.|+++||..++..
T Consensus        77 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  150 (156)
T 1wdc_C           77 DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGE-RLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA  150 (156)
T ss_dssp             TSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSS-CCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred             hccCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC-CCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence               344566899999999999999999999999988765 4677889999999  99999999999999999865

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=99.47  E-value=1.8e-12  Score=91.53  Aligned_cols=126  Identities=12%  Similarity=0.178  Sum_probs=96.6

Q ss_pred             ccchhhhhhhcccCccccCCCCCCCcHHHHHhh----------cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHH
Q 030405            7 GLKHFCVVVVNCCDADLYKQPRGLEDPEALARE----------TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL   76 (178)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l   76 (178)
                      .++.+|..+. +.++.++.     ..+..+...          ..++..++   ...|..+|.+  ++|.|+..+|..++
T Consensus         5 ~l~~~F~~~D-d~~G~i~~-----~el~~~l~~~~g~~~~~~~~~~~~~~~---~~l~~~~D~~--~~g~i~~~eF~~~~   73 (173)
T 1alv_A            5 QFRRLFAQLA-GDDMEVSA-----TELMNILNKVVTRHPDLKTDGFGIDTC---RSMVAVMDSD--TTGKLGFEEFKYLW   73 (173)
T ss_dssp             HHHHHHHHHH-GGGTSBCH-----HHHHHHHHHHHHTCSTTCCSCCCHHHH---HHHHHHHCTT--CSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHh-CCCCCcCH-----HHHHHHHHHhhhcccccccCCCCHHHH---HHHHHHHcCC--CCCccCHHHHHHHH
Confidence            4566777777 77777777     777765554          35666554   4455566777  88999999998877


Q ss_pred             hcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           77 FKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        77 ~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ..     ...+..+|+.+|.+++|.|+.+||..++..+.. ..+.+.+..+|+.+| |++|.|+++||..++..
T Consensus        74 ~~-----~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~  140 (173)
T 1alv_A           74 NN-----IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGF-HLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVR  140 (173)
T ss_dssp             HH-----HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTC-CCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH
T ss_pred             HH-----HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCC-CCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence            53     234678999999999999999999998887765 456778889999998 99999999999888754

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.45  E-value=8.6e-13  Score=97.15  Aligned_cols=129  Identities=12%  Similarity=0.034  Sum_probs=100.8

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhc--CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARET--VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKE   83 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~   83 (178)
                      ..++.+|..+..+.++.++.     .++.......  .++..+++   ..|..+|.+  ++|.|+..+|..++...    
T Consensus        51 ~~l~~~F~~~D~d~~G~I~~-----~El~~~l~~~g~~~~~~~~~---~l~~~~D~d--~dg~I~~~EF~~~~~~~----  116 (220)
T 3sjs_A           51 TRIYQWFMGVDRDRSGTLEI-----NELMMGQFPGGIRLSPQTAL---RMMRIFDTD--FNGHISFYEFMAMYKFM----  116 (220)
T ss_dssp             HHHHHHHHHHCTTCCSSBCH-----HHHHHCCBGGGBCCCHHHHH---HHHHHHCTT--CSSCBCHHHHHHHHHHH----
T ss_pred             HHHHHHHHHhCCCCCCcCcH-----HHHHHHHHHcCCCCCHHHHH---HHHHHhCCC--CCCcCCHHHHHHHHHHH----
Confidence            34566777777777788777     6676654443  35665554   455566777  89999999999987542    


Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                       ..+..+|+.+|.+++|.|+.+||..++..+.. ..+++.+..+|+.+| |++|.|+++||.+++..+
T Consensus       117 -~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~-~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l  181 (220)
T 3sjs_A          117 -ELAYNLFVMNARARSGTLEPHEILPALQQLGF-YINQRTSLLLHRLFA-RGMAFCDLNCWIAICAFA  181 (220)
T ss_dssp             -HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTC-CCCHHHHHHHHHHHC---CCSEEHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCC-CCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH
Confidence             44688999999999999999999999998876 566778999999999 999999999999988654

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=99.45  E-value=1.5e-12  Score=89.16  Aligned_cols=135  Identities=17%  Similarity=0.141  Sum_probs=104.9

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC---
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT---   79 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~---   79 (178)
                      +..|+.+|..+..+.++.++.     ..+..+....+  ++..++..+...+...|.+  + |.|+..+|..++...   
T Consensus         7 ~~~l~~~F~~~D~~~~G~i~~-----~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~--~-g~i~~~eF~~~~~~~~~~   78 (149)
T 2mys_C            7 ADDFKEAFLLFDRTGDAKITA-----SQVGDIARALGQNPTNAEINKILGNPSKEEMN--A-AAITFEEFLPMLQAAANN   78 (149)
T ss_pred             HHHHHHHHHHhCCCCCCcCcH-----HHHHHHHHHhCCCCCHHHHHHHHHHhhhcccc--C-CcCcHHHHHHHHHHHhcc
Confidence            345677788888777888777     77877666544  4566655555544322777  8 999999999887553   


Q ss_pred             -CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           80 -NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        80 -~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                       .......+..+|+.+|.+++|.|+.++|..++..+.. ..+.+.+..+|+. |.|++|.|+++||..++.
T Consensus        79 ~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~  147 (149)
T 2mys_C           79 KDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGE-KMTEEEVEELMKG-QEDSNGCINYEAFVKHIM  147 (149)
T ss_pred             CCcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCC-CCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHh
Confidence             1223455788999999999999999999999988765 4677889999999 999999999999999874

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=99.45  E-value=2.3e-13  Score=98.46  Aligned_cols=132  Identities=12%  Similarity=0.093  Sum_probs=101.6

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-----
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-----   80 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-----   80 (178)
                      ..|..+|..+..+.++.++.     .++... ...+++..    +...|..+|.+  ++|.|+..+|..++....     
T Consensus        29 ~~l~~~F~~~D~d~dG~I~~-----~El~~~-~~lg~~~~----~~~l~~~~D~d--~dg~i~~~EF~~~~~~~~~~~~~   96 (202)
T 2bec_A           29 LRLHHRFRALDRNKKGYLSR-----MDLQQI-GALAVNPL----GDRIIESFFPD--GSQRVDFPGFVRVLAHFRPVEDE   96 (202)
T ss_dssp             HHHHHHHHHHCSSCSSCCCH-----HHHHTC-HHHHHSTT----HHHHHHTTSCS--SCCCCCHHHHHHHHGGGSCCCHH
T ss_pred             HHHHHHHHHHCCCCCCCcCH-----HHHHHH-HhcCCCcc----HHHHHHHhCCC--CCCcCcHHHHHHHHHHhcccchh
Confidence            34666777777777777766     666655 33222222    67788889998  999999999999886532     


Q ss_pred             -------------CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh-CCCCChhHHHHHHHHh----hCCCCCCceeHH
Q 030405           81 -------------KKESLFADRVFDLFDTKHNGILDFEEFARALSIF-HPNSPIDDKIEFSFQL----YDLKQQGFIERQ  142 (178)
Q Consensus        81 -------------~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~-~~~~~~~e~~~~~F~~----~D~d~~G~I~~~  142 (178)
                                   ......+..+|+.+|.+++|.|+.+||..++..+ .. ....+.+..+|+.    +|.|++|.|+++
T Consensus        97 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~-~~~~~~~~~~~~~~~~~~D~d~dG~Is~~  175 (202)
T 2bec_A           97 DTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGV-QVTEEQLENIADRTVQEADEDGDGAVSFV  175 (202)
T ss_dssp             HHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCS-CCCHHHHHHHHHHHHHHHCSSCSSSEEHH
T ss_pred             cccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHcCCCCCCcCcHH
Confidence                         2234557899999999999999999999999887 43 4566677777777    999999999999


Q ss_pred             HHHHHHHH
Q 030405          143 EVKQMVVA  150 (178)
Q Consensus       143 e~~~~l~~  150 (178)
                      ||..++..
T Consensus       176 EF~~~~~~  183 (202)
T 2bec_A          176 EFTKSLEK  183 (202)
T ss_dssp             HHHHTTTT
T ss_pred             HHHHHHHH
Confidence            99998864

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=99.45  E-value=2.8e-12  Score=89.74  Aligned_cols=130  Identities=13%  Similarity=0.133  Sum_probs=102.7

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCC---CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--C
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVF---SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--N   80 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~   80 (178)
                      ..|+.+|..+..+.++.++.     ..+.......+.   +..++..+..   .      .+|.|+..+|..++...  .
T Consensus        25 ~~l~~~F~~~D~d~~G~i~~-----~el~~~l~~~g~~~~~~~~~~~l~~---~------~dg~i~~~eF~~~~~~~~~~   90 (166)
T 2mys_B           25 EDFKEAFTVIDQNADGIIDK-----DDLRETFAAMGRLNVKNEELDAMIK---E------ASGPINFTVFLTMFGEKLKG   90 (166)
T ss_pred             HHHHHHHHHHCCCCCCcCCH-----HHHHHHHHHhCCCCCCHHHHHHHHH---H------CCCCcCHHHHHHHHHHHhcc
Confidence            44667777777777888877     788877766544   5555554443   2      36899999999887652  2


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           81 KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        81 ~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ......+..+|+.+|.+++|.|+.+||..++..+.. ..+++.+..+|+.+|.|++|.|+++||..++..
T Consensus        91 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~  159 (166)
T 2mys_B           91 ADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGG-RFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH  159 (166)
T ss_pred             CCcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCC-CCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHh
Confidence            334566789999999999999999999999988754 467788999999999999999999999999865

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=99.44  E-value=1.4e-12  Score=94.77  Aligned_cols=138  Identities=14%  Similarity=0.161  Sum_probs=105.7

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhc----CCCHHHHHHHH----HHHHhhcccCCCCCcccHHHHHHHH
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARET----VFSVSEIEALY----ELFKKISSAVIDDGLINKEEFQLAL   76 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~l~----~~F~~~d~~~~~~g~i~~~ef~~~l   76 (178)
                      +..++.+|..+..+.++.++.     .++.......    ..+..++..+.    ..|..+|.+  ++|.|+..+|..++
T Consensus        35 ~~~l~~~F~~~D~d~~G~i~~-----~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d--~dg~i~~~EF~~~~  107 (208)
T 2hpk_A           35 LSRLYKRFDTFDLDSDGKMEM-----DEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVE--PVNGLLREDWVEAN  107 (208)
T ss_dssp             -CHHHHHHHHHCTTCSSEECH-----HHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCB--TTTBEEGGGHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCC--CCCeEcHHHHHHHH
Confidence            445667777777777787777     6666655432    46677766655    122778888  99999999999887


Q ss_pred             h---------cC--CCCCH-HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHH
Q 030405           77 F---------KT--NKKES-LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEV  144 (178)
Q Consensus        77 ~---------~~--~~~~~-~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~  144 (178)
                      .         ..  ..... ..+..+|+.+|.+++|.|+.+||..++..+.   .+++.+..+|+.+|.|++|.|+++||
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g---~~~~~~~~~~~~~D~d~dG~I~~~EF  184 (208)
T 2hpk_A          108 RVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD---VPQEAAYTFFEKADTDKSGKLERTEL  184 (208)
T ss_dssp             HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT---SCTTHHHHHHHHHCTTCCSSBCHHHH
T ss_pred             HHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC---cCHHHHHHHHHHhCCCCCCcCcHHHH
Confidence            5         21  11212 2267899999999999999999999998764   45678999999999999999999999


Q ss_pred             HHHHHHHH
Q 030405          145 KQMVVATL  152 (178)
Q Consensus       145 ~~~l~~~~  152 (178)
                      ..++...+
T Consensus       185 ~~~~~~~~  192 (208)
T 2hpk_A          185 VHLFRKFW  192 (208)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99998764

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=99.44  E-value=5.8e-13  Score=100.13  Aligned_cols=100  Identities=20%  Similarity=0.248  Sum_probs=83.4

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhcC-CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh----C-------C
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFKT-NKKESLFADRVFDLFDTKHNGILDFEEFARALSIF----H-------P  116 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~-~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~----~-------~  116 (178)
                      .+...|..+|.+  ++|.|+..+|..++... .......+..+|+.+|.+++|.|+++||..++..+    .       .
T Consensus       130 ~~~~~f~~~D~d--~dG~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~  207 (256)
T 2jul_A          130 YAHFLFNAFDAD--GNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILR  207 (256)
T ss_dssp             HHHHHHHHSSCS--CCSEECSHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSC
T ss_pred             HHHHHHHHhccC--CCCcCcHHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccc
Confidence            466788888998  99999999999988652 23345567899999999999999999999998765    2       1


Q ss_pred             CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          117 NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       117 ~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .....+.+..+|+.+|.|++|.|+.+||..++..
T Consensus       208 ~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~  241 (256)
T 2jul_A          208 EDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQK  241 (256)
T ss_dssp             CCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            1336788999999999999999999999999864

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=99.44  E-value=1.8e-13  Score=93.33  Aligned_cols=99  Identities=12%  Similarity=0.081  Sum_probs=64.7

Q ss_pred             HHHHHhhcccCCCCCcccHHHHHHHHhcCCCC--CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHH
Q 030405           51 YELFKKISSAVIDDGLINKEEFQLALFKTNKK--ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSF  128 (178)
Q Consensus        51 ~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~--~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F  128 (178)
                      ...|..+|.+  ++|.|+..+|..++......  ....+..+|+.+|.+++|.|+.+||..++..+.......+.+..+|
T Consensus         6 ~~l~~~~D~d--~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~   83 (135)
T 3h4s_E            6 KSMLLETTST--TKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMV   83 (135)
T ss_dssp             ---------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHH
T ss_pred             HHHHHHHcCC--CCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHH
Confidence            4567778888  99999999999887552211  2345788999999999999999999999988762146778899999


Q ss_pred             HhhCCCCCCceeHHHHHHHHHHH
Q 030405          129 QLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus       129 ~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      +.+|.|++|.|+++||..++...
T Consensus        84 ~~~D~d~dG~I~~~EF~~~~~~~  106 (135)
T 3h4s_E           84 REGDLDGDGALNQTEFCVLMVRL  106 (135)
T ss_dssp             HHHCSSCSSSBCHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCcHHHHHHHHHHh
Confidence            99999999999999999999875

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=99.43  E-value=2.2e-12  Score=84.36  Aligned_cols=99  Identities=17%  Similarity=0.202  Sum_probs=80.4

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC--CCCC
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFH--PNSP  119 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~--~~~~  119 (178)
                      ++..+++.+...   +|    ++|.|+..+|..++... ......+..+|+.+|.+++|.|+.+||..++..+.  ....
T Consensus         7 ~~~~e~~~~~~~---~d----~~g~i~~~eF~~~~~~~-~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   78 (109)
T 1bu3_A            7 LADADVAAALKA---CE----AADSFNYKAFFAKVGLT-AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARAL   78 (109)
T ss_dssp             SCHHHHHHHHHH---TC----STTCCCHHHHHHHHTGG-GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCC
T ss_pred             CCHHHHHHHHHH---hC----CCCcCcHHHHHHHHHcC-hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCC
Confidence            566665555544   45    57899999999987543 23455678999999999999999999999999883  2246


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ..+.+..+|+.+|.|++|.|+++||..++
T Consensus        79 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~  107 (109)
T 1bu3_A           79 TDAETKAFLKAGDSDGDGAIGVDEWAALV  107 (109)
T ss_dssp             CHHHHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            77889999999999999999999999886

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=99.43  E-value=1.1e-13  Score=107.65  Aligned_cols=117  Identities=12%  Similarity=0.232  Sum_probs=92.2

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS  118 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~  118 (178)
                      ..+++.++..+...|..+|.+  ++|.|+..+|..++...+. .....+..+|..+|.+++|.|+|.+|...+.      
T Consensus       114 ~~Ls~~e~~~l~~~F~~~D~d--~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d~~G~I~f~ef~~l~~------  185 (323)
T 1ij5_A          114 PMLSEEDTNILRQLFLSSAVS--GSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVAN------  185 (323)
T ss_dssp             CCCCHHHHHHHHHHHTSSSST--TSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHH------
T ss_pred             HhCCHHHHHHHHHHHHHHhCC--CCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHhhhh------
Confidence            468999999999999999999  9999999999999876332 2334578899999999999999988876542      


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHH-HHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIES-IIDKV  171 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~-~~~~~  171 (178)
                       ....+..+|+.||.|++|+|+.+||..++  +    |..++..++.. ++..+
T Consensus       186 -~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~----g~~~~~~ei~~~l~~~~  232 (323)
T 1ij5_A          186 -DLAALVADFRKIDTNSNGTLSRKEFREHF--V----RLGFDKKSVQDALFRYA  232 (323)
T ss_dssp             -HHHTSCCCHHHHCTTCCSEECHHHHHHHH--H----HTTCCCHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHCCCCCCcCcHHHHHHHH--c----CCCCCHHHHHHHHHHHh
Confidence             23446778999999999999999999888  3    55667666666 55443

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=99.43  E-value=2.1e-12  Score=91.92  Aligned_cols=91  Identities=14%  Similarity=0.220  Sum_probs=77.1

Q ss_pred             HHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC----CCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChh
Q 030405           47 IEALYELFKKISSAVIDDGLINKEEFQLALFKT----NKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPID  121 (178)
Q Consensus        47 i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~----~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~  121 (178)
                      +..+..+|..+| +  ++|+|+..+|..++...    +.. ....++.+++.+| +++|.|+|+||+.++...       
T Consensus        75 ~~~l~~aF~~fD-d--~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~-------  143 (174)
T 2i7a_A           75 LVHYQHVFQKVQ-T--SPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRL-------  143 (174)
T ss_dssp             HHHHHHHHHHHC-S--BTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHH-------
T ss_pred             HHHHHHHHHHhc-C--CCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHH-------
Confidence            356788999999 9  99999999999999776    543 4567899999999 899999999999988654       


Q ss_pred             HHHHHHHHhhCCCCCC-ceeHHHHHHHH
Q 030405          122 DKIEFSFQLYDLKQQG-FIERQEVKQMV  148 (178)
Q Consensus       122 e~~~~~F~~~D~d~~G-~I~~~e~~~~l  148 (178)
                      +.+..+|+.+|++++| .++.+||..++
T Consensus       144 ~~~~~~F~~~D~d~~GI~~~~~Ef~~~~  171 (174)
T 2i7a_A          144 EAMAKTFRNLSKDGKGLYLTEMEWMSLV  171 (174)
T ss_dssp             HHHHHHHHHHCSSSSCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCceecHHHHHHHH
Confidence            5688999999999999 34888887764

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.42  E-value=1.7e-13  Score=98.52  Aligned_cols=132  Identities=20%  Similarity=0.228  Sum_probs=104.7

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-C
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-K   81 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~   81 (178)
                      +..++.+|..+..+.++.++.     ..+.......+  ++..+   +...|..+|.+  ++|.|+..+|..++.... .
T Consensus         9 ~~~l~~~F~~~D~d~dG~I~~-----~E~~~~l~~~g~~~~~~~---~~~l~~~~D~d--~dG~I~~~EF~~~~~~~~~~   78 (188)
T 1s6i_A            9 IGGLKELFKMIDTDNSGTITF-----DELKDGLKRVGSELMESE---IKDLMDAADID--KSGTIDYGEFIAATVHLNKL   78 (188)
T ss_dssp             TCSHHHHHHTTSSSSSSCEEH-----HHHHHHHTTTTCCCCHHH---HHHHHHHTCTT--CSSEECHHHHHHHHTTSSSS
T ss_pred             HHHHHHHHHHHCCCCCCcCCH-----HHHHHHHHHcCCCCCHHH---HHHHHHHcCCC--CCCeEeHHHHHHHHHHHhcc
Confidence            456777888888888888877     78887766654  44544   56677778888  999999999999875532 1


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .....+..+|+.+|.+++|.|+.+||..++..+.   .+++.+..+|+.+|.|++|.|+++||..++.
T Consensus        79 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g---~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~  143 (188)
T 1s6i_A           79 EREENLVSAFSYFDKDGSGYITLDEIQQACKDFG---LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMR  143 (188)
T ss_dssp             CCCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTT---CCTTHHHHHHHHHCSSSSSEEETTHHHHTTS
T ss_pred             CHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC---CCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence            2223468999999999999999999999887653   3557789999999999999999999999874

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=99.41  E-value=4.1e-12  Score=82.97  Aligned_cols=100  Identities=17%  Similarity=0.240  Sum_probs=80.6

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC--CCCC
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFH--PNSP  119 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~--~~~~  119 (178)
                      ++..+++.+   |..+|    ++|.|+..+|..++... ......+..+|+.+|.+++|.|+.+||..++..+.  ....
T Consensus         6 ~t~~e~~~~---~~~~d----~~g~i~~~eF~~~~~~~-~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   77 (109)
T 1rwy_A            6 LSAEDIKKA---IGAFT----AADSFDHKKFFQMVGLK-KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDL   77 (109)
T ss_dssp             SCHHHHHHH---HHTTC----STTCCCHHHHHHHHTGG-GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred             CCHHHHHHH---HHHcC----CCCcEeHHHHHHHHhcC-cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCC
Confidence            456665544   55555    57899999999987442 23456678999999999999999999999998873  2245


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      ..+.+..+|+.+|.|++|.|+++||..++.
T Consensus        78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (109)
T 1rwy_A           78 SAKETKTLMAAGDKDGDGKIGVEEFSTLVA  107 (109)
T ss_dssp             CHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             CHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence            678899999999999999999999999874

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=99.41  E-value=6.8e-12  Score=88.01  Aligned_cols=121  Identities=15%  Similarity=0.140  Sum_probs=91.5

Q ss_pred             hhhhhcccCccccCCCCCCCcHHHHHhhcC-------CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCH
Q 030405           12 CVVVVNCCDADLYKQPRGLEDPEALARETV-------FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES   84 (178)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~   84 (178)
                      +..+..+.++.++.     .++.......+       ++..++   ...|..+|.+  ++|.|+..+|..++...     
T Consensus         7 F~~~D~d~~G~i~~-----~el~~~l~~lg~~~~~~~~~~~~~---~~l~~~~D~~--~~g~i~~~eF~~~~~~~-----   71 (167)
T 1gjy_A            7 YFASVAGQDGQIDA-----DELQRCLTQSGIAGGYKPFNLETC---RLMVSMLDRD--MSGTMGFNEFKELWAVL-----   71 (167)
T ss_dssp             HHHHHCCTTSCBCH-----HHHHHHHHHHTCSTTSCCCCHHHH---HHHHHHHCTT--CCSCBCHHHHHHHHHHH-----
T ss_pred             HHHHHcCCCCcCCH-----HHHHHHHHhhcccCCCCCcCHHHH---HHHHHHHCCC--CCCcCCHHHHHHHHHHH-----
Confidence            44566667777777     77777766643       455554   4455666777  88999999998877442     


Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ..+..+|+.+|.+++|.|+.+||..++..+.. ..+.+.+..+|+.+  |++|.|+++||..++..
T Consensus        72 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~  134 (167)
T 1gjy_A           72 NGWRQHFISFDSDRSGTVDPQELQKALTTMGF-RLNPQTVNSIAKRY--STSGKITFDDYIACCVK  134 (167)
T ss_dssp             HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTC-CCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC-CCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHH
Confidence            45678899999999999999999988887654 45677888888888  78899999999888754

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=99.41  E-value=3.7e-12  Score=83.10  Aligned_cols=100  Identities=17%  Similarity=0.198  Sum_probs=79.8

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC--CCCC
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFH--PNSP  119 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~--~~~~  119 (178)
                      ++.+++..+   |..+|    ++|.|+..+|..++... ......+..+|+.+|.+++|.|+.+||..++..+.  ....
T Consensus         6 ~~~~e~~~l---~~~~d----~~g~i~~~eF~~~~~~~-~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   77 (108)
T 2pvb_A            6 LKDADVAAA---LAACS----AADSFKHKEFFAKVGLA-SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARAL   77 (108)
T ss_dssp             SCHHHHHHH---HHHTC----STTCCCHHHHHHHHTGG-GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCC
T ss_pred             CCHHHHHHH---HHHhC----CCCcCcHHHHHHHHhCC-hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCC
Confidence            455555554   44455    57899999999987443 23455679999999999999999999999998773  2246


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      ..+.+..+|+.+|.|++|.|+++||..++.
T Consensus        78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 2pvb_A           78 TDAETKAFLADGDKDGDGMIGVDEFAAMIK  107 (108)
T ss_dssp             CHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            778899999999999999999999998874

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=99.40  E-value=4.3e-13  Score=93.76  Aligned_cols=132  Identities=22%  Similarity=0.252  Sum_probs=97.1

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KK   82 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~   82 (178)
                      ..|..++..+..+.++.++.     .++.......+  ++..+   +...|..+|.+  ++|.|+..+|..++.... ..
T Consensus        27 ~~l~~~F~~~D~~~~G~i~~-----~e~~~~l~~~~~~~~~~~---~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~~~   96 (166)
T 2aao_A           27 AGLKEMFNMIDADKSGQITF-----EELKAGLKRVGANLKESE---ILDLMQAADVD--NSGTIDYKEFIAATLHLNKIE   96 (166)
T ss_dssp             HHHHHHHHHHCTTCCSSBCH-----HHHHHHGGGGTCCCCHHH---HHHHHHHHCTT--CCSSBCHHHHHHHHTTCHHHH
T ss_pred             HHHHHHHHHhCCCCCCeEeH-----HHHHHHHHHhCCCCCHHH---HHHHHHHhCCC--CCCeEcHHHHHHHHHHHhhcc
Confidence            34666777777777777777     77777666544  34544   55667777888  999999999998875421 12


Q ss_pred             CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           83 ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        83 ~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ....+..+|+.+|.+++|.|+.+||..++..+.   .+++.+..+|+.+|.|++|.|+++||..++..
T Consensus        97 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~---~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  161 (166)
T 2aao_A           97 REDHLFAAFTYFDKDGSGYITPDELQQACEEFG---VEDVRIEELMRDVDQDNDGRIDYNEFVAMMQK  161 (166)
T ss_dssp             TTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC-----------CCHHHHHCTTCSSSBCHHHHHHHHC-
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC---CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            234578999999999999999999999887552   34677889999999999999999999999844

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=99.40  E-value=2.5e-12  Score=83.97  Aligned_cols=100  Identities=20%  Similarity=0.266  Sum_probs=80.8

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC--CCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFH--PNS  118 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~--~~~  118 (178)
                      .++..+++.+...   +|    ++|.|+..+|..++... ......+..+|+.+|.+++|.|+.+||..++..+.  ...
T Consensus         5 ~~t~~e~~~~~~~---~d----~~g~i~~~eF~~~~~~~-~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~   76 (108)
T 1rro_A            5 ILSAEDIAAALQE---CQ----DPDTFEPQKFFQTSGLS-KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARE   76 (108)
T ss_dssp             TSCHHHHHHHHHH---TC----STTCCCHHHHHHHHSGG-GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCC
T ss_pred             cCCHHHHHHHHHH---cc----CCCCcCHHHHHHHHhcC-cccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCC
Confidence            4677776665554   45    57899999999887432 23455678999999999999999999999998873  224


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ...+.+..+|+.+|.|++|.|+++||..++
T Consensus        77 ~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~  106 (108)
T 1rro_A           77 LTESETKSLMDAADNDGDGKIGADEFQEMV  106 (108)
T ss_dssp             CCHHHHHHHHHHHCCSSSSSEEHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            567889999999999999999999999876

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.40  E-value=7.2e-13  Score=107.91  Aligned_cols=136  Identities=16%  Similarity=0.211  Sum_probs=103.4

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcH----HHHHhhcCCCHH------HHHHHHHHHHhhcccCCCCCcccHHHHHHH
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDP----EALARETVFSVS------EIEALYELFKKISSAVIDDGLINKEEFQLA   75 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~------~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~   75 (178)
                      ..++.+|..+..+.++.++.     .++    ..+....++...      .-..+...|..+|.+  ++|.|+.+||..+
T Consensus       335 ~~l~~~F~~~D~d~dG~I~~-----~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d--~~g~i~~~Ef~~~  407 (484)
T 3nyv_A          335 KELTAIFHKMDKNGDGQLDR-----AELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFD--KNGYIEYSEFVTV  407 (484)
T ss_dssp             HHHHHHHHHHCTTCSSEEEH-----HHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCC--TTSEEEHHHHHHH
T ss_pred             HHHHHHHHHhCcCCCceEeH-----HHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCC--CCCeEeHHHHHHH
Confidence            34667777788788888776     666    333332222221      135677888888999  9999999999988


Q ss_pred             HhcC-CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           76 LFKT-NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        76 l~~~-~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      +... .......+..+|+.+|.+++|.|+.+||..++...   ...++.+..+|+.+|.|++|.|+++||..++..+
T Consensus       408 ~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~---~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~  481 (484)
T 3nyv_A          408 AMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVS---DVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL  481 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT---TCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred             HHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhc---CCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhh
Confidence            7542 12233557899999999999999999999998762   4567889999999999999999999999999765

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=99.40  E-value=3.8e-12  Score=93.82  Aligned_cols=134  Identities=19%  Similarity=0.222  Sum_probs=98.6

Q ss_pred             ccchhhhhhhcc--cCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--CC
Q 030405            7 GLKHFCVVVVNC--CDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--KK   82 (178)
Q Consensus         7 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~~   82 (178)
                      .+..+|..+..+  .++.++.     ..+...... ..+..+ ..+...|..+|.+  ++|.|+..+|..++....  ..
T Consensus        49 ~l~~~F~~~D~d~~~~G~I~~-----~El~~~l~~-~~~~~~-~~~~~~f~~~D~d--~dG~I~~~Ef~~~~~~~~~~~~  119 (226)
T 2zfd_A           49 ALYELFKKISSAVIDDGLINK-----EEFQLALFK-TNKKES-LFADRVFDLFDTK--HNGILGFEEFARALSVFHPNAP  119 (226)
T ss_dssp             HHHHHHHHHHTSSSCSSSBCH-----HHHHHHHHS-CSSCCC-HHHHHHHHHHCSS--CSSSBCHHHHHHHHHHTSTTSC
T ss_pred             HHHHHHHHhCcccCCCCeEcH-----HHHHHHHhc-cCcccH-HHHHHHHHHHcCC--CCCcCcHHHHHHHHHHHccCCC
Confidence            355666666666  6677766     667665544 222211 2355688888998  999999999999886633  23


Q ss_pred             CHHHHHHHHHHHhcCCCCcccHHHHHHHHHh----hCCCCChhHH----HHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           83 ESLFADRVFDLFDTKHNGILDFEEFARALSI----FHPNSPIDDK----IEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        83 ~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~----~~~~~~~~e~----~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ....+..+|+.+|.+++|.|+++||..++..    ... ...++.    ++.+|+.+|.|++|.|+++||..++..
T Consensus       120 ~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~-~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~  194 (226)
T 2zfd_A          120 IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGM-NLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR  194 (226)
T ss_dssp             HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            3456889999999999999999999998852    222 233333    467788999999999999999999875

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=99.40  E-value=8e-12  Score=87.40  Aligned_cols=121  Identities=13%  Similarity=0.136  Sum_probs=87.4

Q ss_pred             hhhhhcccCccccCCCCCCCcHHHHHhhcC-------CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCH
Q 030405           12 CVVVVNCCDADLYKQPRGLEDPEALARETV-------FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES   84 (178)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~   84 (178)
                      +..+..+.++.++.     .++.......+       ++..++   ...|..+|.+  ++|.|+..+|..++...     
T Consensus         5 F~~~D~d~~G~i~~-----~el~~~l~~lg~~~~~~~~~~~~~---~~l~~~~D~~--~~g~i~~~eF~~~~~~~-----   69 (165)
T 1k94_A            5 YFSAVAGQDGEVDA-----EELQRCLTQSGINGTYSPFSLETC---RIMIAMLDRD--HTGKMGFNAFKELWAAL-----   69 (165)
T ss_dssp             HHHHHHGGGTSBCH-----HHHHHHHHHHTTTTTSCCCCHHHH---HHHHHHHCTT--CSSCBCHHHHHHHHHHH-----
T ss_pred             HHHHhCCCCCcCCH-----HHHHHHHHHhccccCCCCCCHHHH---HHHHHHhCCC--CCCcCCHHHHHHHHHHH-----
Confidence            44555566667666     77777666643       455554   4455566777  88888888888776442     


Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ..+..+|+.+|.+++|.|+.+||..++..+.. ..+.+.+..+|+.+  |++|.|+++||..++..
T Consensus        70 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~  132 (165)
T 1k94_A           70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGY-RLSPQTLTTIVKRY--SKNGRIFFDDYVACCVK  132 (165)
T ss_dssp             HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTC-CCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCceECHHHHHHHHHHhCC-CCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence            34678888888888888888888888877654 45667788888888  78888888888888754

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=99.39  E-value=6.6e-12  Score=82.12  Aligned_cols=100  Identities=18%  Similarity=0.256  Sum_probs=80.2

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC--CCCC
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFH--PNSP  119 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~--~~~~  119 (178)
                      ++..+++.+..   .+|    ++|.|+..+|..++.. .......+..+|+.+|.+++|.|+.+||..++..+.  ....
T Consensus         7 ~t~~e~~~~~~---~~d----~~g~i~~~ef~~~~~~-~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   78 (110)
T 1pva_A            7 LKADDIKKALD---AVK----AEGSFNHKKFFALVGL-KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDL   78 (110)
T ss_dssp             SCHHHHHHHHH---HTC----STTCCCHHHHHHHHTC-TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCC
T ss_pred             CCHHHHHHHHH---hcC----CCCcCcHHHHHHHHcc-CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCC
Confidence            45666555544   455    5789999999998743 233456678999999999999999999999998873  2245


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      +.+.+..+|+.+|.|++|.|+++||..++.
T Consensus        79 ~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  108 (110)
T 1pva_A           79 TDAETKAFLKAADKDGDGKIGIDEFETLVH  108 (110)
T ss_dssp             CHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            678899999999999999999999999874

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.39  E-value=1e-12  Score=107.48  Aligned_cols=136  Identities=13%  Similarity=0.122  Sum_probs=105.1

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCC-------HHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFS-------VSEIEALYELFKKISSAVIDDGLINKEEFQLALFK   78 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~   78 (178)
                      ..+..+|..+..+.++.++.     .++..........       ...-..+...|..+|.+  ++|.|+..||..++..
T Consensus       346 ~~l~~~F~~~D~d~dG~I~~-----~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d--~~G~I~~~EF~~~~~~  418 (494)
T 3lij_A          346 KELTDIFRHIDKNGDGQLDR-----QELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFD--RNGYIDYSEFVTVAMD  418 (494)
T ss_dssp             HHHHHHHHHHCTTCSSEECH-----HHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTT--CSSSEEHHHHHHHHSC
T ss_pred             HHHHHHHHHhCcCCCCeEcH-----HHHHHHHHHhcccccccccccccHHHHHHHHHHhCCC--CCCcCcHHHHHHHHHh
Confidence            45677778888888888776     6666544443110       11234577888888998  9999999999998754


Q ss_pred             C-CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           79 T-NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        79 ~-~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      . .......+..+|+.+|.+++|.|+++||..++..   ....++.+..+|+.+|.|++|.|+++||..++..+
T Consensus       419 ~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~---~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~  489 (494)
T 3lij_A          419 RKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL---DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKL  489 (494)
T ss_dssp             HHHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C---CSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHHH
T ss_pred             hhccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh---cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhh
Confidence            2 2233456789999999999999999999998865   24567889999999999999999999999999876

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=99.38  E-value=9.2e-12  Score=87.46  Aligned_cols=135  Identities=13%  Similarity=0.107  Sum_probs=104.5

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhc------CCCHHH-HHHH-----HHHHHhhcccCCCCCcccHHHHH
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARET------VFSVSE-IEAL-----YELFKKISSAVIDDGLINKEEFQ   73 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-i~~l-----~~~F~~~d~~~~~~g~i~~~ef~   73 (178)
                      ..++.+|..+..+.++.++.     ..+.......      ..+..+ +..+     ...|..+|    ++|.|+..+|.
T Consensus         6 ~~l~~~F~~~D~d~~G~i~~-----~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D----~~g~i~~~EF~   76 (174)
T 1q80_A            6 QKMKTYFNRIDFDKDGAITR-----MDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA----GGKGIDETTFI   76 (174)
T ss_dssp             HHHHHHHHHHCTTCSSEESH-----HHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT----TTSCEEHHHHH
T ss_pred             HHHHHHHHhcCCCCCCcEeH-----HHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC----CCCeEcHHHHH
Confidence            45677788888888888877     7777765543      344545 4332     35566666    58999999999


Q ss_pred             HHHhcCCCC------CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHH
Q 030405           74 LALFKTNKK------ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQM  147 (178)
Q Consensus        74 ~~l~~~~~~------~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~  147 (178)
                      .++......      ....+..+|+.+|.+++|.|+.+||..++..+.   .+++.+..+|+.+|.|++|.|+++||..+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g---~~~~~~~~~~~~~D~d~dg~i~~~ef~~~  153 (174)
T 1q80_A           77 NSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG---LDKTMAPASFDAIDTNNDGLLSLEEFVIA  153 (174)
T ss_dssp             HHHHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHT---CCGGGHHHHHHHHCTTCSSSBCHHHHHHH
T ss_pred             HHHHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcC---CCHHHHHHHHHHhCCCCCceEeHHHHHHH
Confidence            987653221      124578899999999999999999999998873   45678999999999999999999999999


Q ss_pred             HHHHH
Q 030405          148 VVATL  152 (178)
Q Consensus       148 l~~~~  152 (178)
                      +...+
T Consensus       154 ~~~~~  158 (174)
T 1q80_A          154 GSDFF  158 (174)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            98876

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=99.38  E-value=5.1e-12  Score=91.59  Aligned_cols=134  Identities=19%  Similarity=0.170  Sum_probs=97.5

Q ss_pred             ccchhhhhhhcc--cCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC--C
Q 030405            7 GLKHFCVVVVNC--CDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK--K   82 (178)
Q Consensus         7 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~--~   82 (178)
                      .+..+|..+..+  .++.++.     ..+...... ..+..+ ..+...|..+|.+  ++|.|+..+|..++.....  .
T Consensus        38 ~l~~~F~~~D~d~~~~G~i~~-----~e~~~~l~~-~~~~~~-~~~~~~f~~~D~d--~~g~i~~~Ef~~~~~~~~~~~~  108 (207)
T 2ehb_A           38 ALYELFKKLSSSIIDDGLIHK-----EEFQLALFR-NRNRRN-LFADRIFDVFDVK--RNGVIEFGEFVRSLGVFHPSAP  108 (207)
T ss_dssp             HHHHHHHHHTTSSSCSSCEEH-----HHHHHHHHS-CTTCCC-HHHHHHHHHHCTT--CSSEECHHHHHHHHGGGSTTSC
T ss_pred             HHHHHHHHhccccCCCCccCH-----HHHHHHHhc-cccccH-HHHHHHHHHhcCC--CCCeEeHHHHHHHHHHHccCCC
Confidence            455666666665  6666666     666665543 122111 2345678888988  9999999999998876432  3


Q ss_pred             CHHHHHHHHHHHhcCCCCcccHHHHHHHHHh----hCCCCChhHH----HHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           83 ESLFADRVFDLFDTKHNGILDFEEFARALSI----FHPNSPIDDK----IEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        83 ~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~----~~~~~~~~e~----~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ....+..+|+.+|.+++|.|+++||..++..    ... ...++.    +..+|+.+|.|++|.|+++||..++..
T Consensus       109 ~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~-~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  183 (207)
T 2ehb_A          109 VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESEL-VLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSL  183 (207)
T ss_dssp             HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTC-CCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHccc-ccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            3455789999999999999999999998853    232 223333    567889999999999999999999875

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=99.38  E-value=7.8e-12  Score=90.20  Aligned_cols=127  Identities=17%  Similarity=0.147  Sum_probs=98.2

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC-------CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV-------FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK   78 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~   78 (178)
                      ..++. |..+..+.++.++.     .++.......+       ++..++   ...|..+|.+  ++|.|+..+|..++..
T Consensus        33 ~~l~~-F~~~D~d~~G~i~~-----~el~~~l~~lg~~~~~~~~~~~~~---~~l~~~~D~d--~~g~i~~~eF~~~~~~  101 (198)
T 1juo_A           33 DPLYG-YFAAVAGQDGQIDA-----DELQRCLTQSGIAGGYKPFNLETC---RLMVSMLDRD--MSGTMGFNEFKELWAV  101 (198)
T ss_dssp             CTTHH-HHHHHHTTTTEECH-----HHHHHHHHHHTTTCSSCCCCHHHH---HHHHHHHCTT--CSSCEEHHHHHHHHHH
T ss_pred             HHHHH-HHHHhCCCCCcCCH-----HHHHHHHHHhcccCCCCCCCHHHH---HHHHHHhCCC--CCCeECHHHHHHHHHH
Confidence            34556 66677777777777     77777766643       455554   4556666777  8999999999987754


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           79 TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        79 ~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .     ..+..+|+.+|.+++|.|+.+||..++..+.. ....+.+..+|+.+  |++|.|+++||..++..+
T Consensus       102 ~-----~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~  166 (198)
T 1juo_A          102 L-----NGWRQHFISFDTDRSGTVDPQELQKALTTMGF-RLSPQAVNSIAKRY--STNGKITFDDYIACCVKL  166 (198)
T ss_dssp             H-----HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTC-CCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH
T ss_pred             H-----HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCC-CCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence            2     45688999999999999999999999887765 45677889999999  889999999999988653

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=99.38  E-value=1.1e-12  Score=89.34  Aligned_cols=130  Identities=14%  Similarity=0.165  Sum_probs=101.9

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNK   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~   81 (178)
                      .-|+.+|..+..+.++.++.     ..+.......+.  +..++..+...         ++|.|+..+|..++..  ...
T Consensus         7 ~~l~~~F~~~D~d~~G~i~~-----~el~~~l~~~g~~~~~~~~~~~~~~---------~~g~i~~~eF~~~~~~~~~~~   72 (143)
T 3j04_B            7 QEFKEAFNMIDQNRDGFIDK-----EDLHDMLASMGKNPTDEYLEGMMSE---------APGPINFTMFLTMFGEKLNGT   72 (143)
T ss_dssp             HHHHHHHTTTCSSCTTCCCH-----HHHHHHHHHTSCCCCHHHHHTTTTT---------SSSCCCHHHHHHHHHHTTTSS
T ss_pred             HHHHHHHHHhCCCCCCCcCH-----HHHHHHHHHhCCCCCHHHHHHHHHh---------CCCCcCHHHHHHHHHHHhccC
Confidence            44667777777777788777     778777666544  45444433322         5789999999998865  223


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .....+..+|+.+|.+++|.|+.+||..++..+.. ..+++.+..+|+.+|.|++|.|+++||..++..
T Consensus        73 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~-~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  140 (143)
T 3j04_B           73 DPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGD-RFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH  140 (143)
T ss_dssp             CCHHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSS-CCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred             CcHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCC-CCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence            34566889999999999999999999999988765 567788999999999999999999999999853

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.38  E-value=2.6e-12  Score=105.30  Aligned_cols=133  Identities=19%  Similarity=0.170  Sum_probs=104.9

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhc----------CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHH
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARET----------VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLA   75 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~   75 (178)
                      ..++.+|..+..+.++.++.     .++.......          ..+.   ..+...|..+|.+  ++|.|+.+||..+
T Consensus       355 ~~l~~~F~~~D~d~dG~I~~-----~El~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~d--~dG~I~~~EF~~~  424 (504)
T 3q5i_A          355 KELTDIFKKLDKNGDGQLDK-----KELIEGYNVLRNFKNELGELKNVE---EEVDNILKEVDFD--KNGYIEYSEFISV  424 (504)
T ss_dssp             HHHHHHHHHHCTTCSSEECH-----HHHHHHHHHHHHHC--CCSCCCHH---HHHHHHHHHHCTT--CSSSEEHHHHHHH
T ss_pred             HHHHHHHHeeCCCCCCeEcH-----HHHHHHHHHhhhcccccccccccH---HHHHHHHHHhCCC--CCCcEeHHHHHHH
Confidence            44677788888888888877     6666544432          1223   3466778888888  9999999999998


Q ss_pred             HhcC-CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           76 LFKT-NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        76 l~~~-~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      +... .......+..+|+.+|.+++|.|+.+||..++...   +..++.+..+|+.+|.|++|.|+++||..+|..+
T Consensus       425 ~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~---~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~  498 (504)
T 3q5i_A          425 CMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLT---SISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKI  498 (504)
T ss_dssp             HSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTCS---CCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHHH
T ss_pred             HHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhC---CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            7542 22334567899999999999999999999987652   4577889999999999999999999999999876

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=99.38  E-value=8.5e-12  Score=86.33  Aligned_cols=129  Identities=16%  Similarity=0.189  Sum_probs=102.0

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNK   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~   81 (178)
                      ..|+.+|..+..+.++.++.     ..+.......+  ++..++..+..       +  ++|.|+..+|..++..  ...
T Consensus        18 ~~l~~~F~~~D~d~~G~i~~-----~el~~~l~~~g~~~~~~~~~~~~~-------~--~~g~i~~~eF~~~~~~~~~~~   83 (156)
T 1wdc_B           18 QEMKEAFSMIDVDRDGFVSK-----EDIKAISEQLGRAPDDKELTAMLK-------E--APGPLNFTMFLSIFSDKLSGT   83 (156)
T ss_dssp             HHHHHHHHHHCTTCSSSCCH-----HHHHHHHHHHSSCCCHHHHHHHHT-------T--SSSCCCHHHHHHHHHHHTCSC
T ss_pred             HHHHHHHHHHCCCCCCcCcH-----HHHHHHHHHhCCCCCHHHHHHHHH-------h--CCCcCcHHHHHHHHHHHhcCC
Confidence            45677788887777888777     77877666543  45555554442       3  6899999999998754  223


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .....+..+|+.+|.+++|.|+.++|..++..+.. ..+.+.+..+|+.+|.| +|.|+++||..++..
T Consensus        84 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~  150 (156)
T 1wdc_B           84 DSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGD-NFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG  150 (156)
T ss_dssp             CCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSS-CCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred             ChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCC-CCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhc
Confidence            34566889999999999999999999999988765 56778899999999999 999999999999854

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=99.37  E-value=6.5e-13  Score=91.40  Aligned_cols=134  Identities=15%  Similarity=0.135  Sum_probs=100.8

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-   81 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-   81 (178)
                      +..|+.+|..+..+.++.++.     ..+.......+  .+..++..   .|..+|.+..++|.|+..+|..++..... 
T Consensus         9 ~~~l~~~F~~~D~d~~G~i~~-----~el~~~l~~~g~~~~~~~~~~---l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~   80 (151)
T 1w7j_B            9 LEEFKEAFELFDRVGDGKILY-----SQCGDVMRALGQNPTNAEVLK---VLGNPKSDELKSRRVDFETFLPMLQAVAKN   80 (151)
T ss_dssp             --CHHHHHHHHCCSSSSEEES-----TTHHHHHHHTTCCCCHHHHHH---HTTCCCHHHHTTCEEEHHHHHHHHHHHCC-
T ss_pred             HHHHHHHHHHHCCCCCCcCcH-----HHHHHHHHHcCCCCCHHHHHH---HHHHhCcCcCCCCcCcHHHHHHHHHHHhcc
Confidence            456788888888888888888     88888766654  45555444   45444432114799999999998755221 


Q ss_pred             ---CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           82 ---KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        82 ---~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                         .....+..+|+.+|.+++|.|+.+||..++..+.. ..+++.+..+|+.+| |++|.|+++||..++
T Consensus        81 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~  148 (151)
T 1w7j_B           81 RGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGE-KMTEEEVETVLAGHE-DSNGCINYEAFLKHI  148 (151)
T ss_dssp             -------CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSS-CCCHHHHHHHHTTCC-CTTSEEEHHHHHHHT
T ss_pred             CCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC-CCCHHHHHHHHHhcc-CCCCeEeHHHHHHHH
Confidence               11233577999999999999999999999988765 467788999999999 999999999999886

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=99.37  E-value=1.3e-12  Score=113.29  Aligned_cols=106  Identities=16%  Similarity=0.341  Sum_probs=92.9

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS  118 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~  118 (178)
                      ..++..++..+...|..+|.+  ++|.|+..+|..++...+. .....+..+|..+|.+++|.|+|+||+.++.......
T Consensus       717 ~~l~~~~~~~~~~~F~~~D~d--~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~  794 (863)
T 1sjj_A          717 KGISQEQMNEFRASFNHFDRK--KTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADT  794 (863)
T ss_dssp             CCSSHHHHHHHHHHHTTTCSS--SSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTC
T ss_pred             cCCCHHHHHHHHHHHHHHCCC--CCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCC
Confidence            467788899999999999999  9999999999999876443 3456789999999999999999999999988776545


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ...+.+..+|+.| .|++|+|+.+||..++
T Consensus       795 ~~~~~l~~aF~~~-~d~~G~Is~~El~~~l  823 (863)
T 1sjj_A          795 DTADQVMASFKIL-AGDKNYITVDELRREL  823 (863)
T ss_dssp             SSSHHHHHHHHGG-GTSSSEEEHHHHHHHS
T ss_pred             CCHHHHHHHHHHH-hCCCCcCcHHHHHHHC
Confidence            6678899999999 8999999999999986

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=99.37  E-value=3.7e-12  Score=92.61  Aligned_cols=132  Identities=14%  Similarity=0.113  Sum_probs=99.3

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC----
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK----   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~----   81 (178)
                      ..|..+|..+..+.++.++.     .++..+... +++..    ....|..+|.+  ++|.|+..+|..++.....    
T Consensus        29 ~~l~~~F~~~D~d~dG~Is~-----~El~~~~~l-g~~~~----~~~l~~~~d~~--~~g~i~~~EF~~~~~~~~~~~~~   96 (208)
T 2ct9_A           29 TRLYSRFTSLDKGENGTLSR-----EDFQRIPEL-AINPL----GDRIINAFFSE--GEDQVNFRGFMRTLAHFRPIEDN   96 (208)
T ss_dssp             HHHHHHHHHHCTTCSSEECT-----GGGGGCHHH-HTSTT----HHHHHHTTSCT--TCSCEEHHHHHHHHHTTSCCC--
T ss_pred             HHHHHHHHHHCCCCCCcCcH-----HHHHHHHHc-CCCCc----HHHHHHHHcCC--CCCcCcHHHHHHHHHhhccccch
Confidence            34667777787788888877     666654322 22211    12457777888  8999999999998765321    


Q ss_pred             -------------CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh-CCCCChhHHHHHH----HHhhCCCCCCceeHHH
Q 030405           82 -------------KESLFADRVFDLFDTKHNGILDFEEFARALSIF-HPNSPIDDKIEFS----FQLYDLKQQGFIERQE  143 (178)
Q Consensus        82 -------------~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~-~~~~~~~e~~~~~----F~~~D~d~~G~I~~~e  143 (178)
                                   .....+..+|+.+|.+++|.|+.+||..++..+ .. ...++.+..+    |+.+|.|++|.|+++|
T Consensus        97 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~-~~s~~~~~~l~~~~~~~~D~d~dG~Is~~E  175 (208)
T 2ct9_A           97 EKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGV-NISDEQLGSIADRTIQEADQDGDSAISFTE  175 (208)
T ss_dssp             ---------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCT-TCCHHHHHHHHHHHHHHHCSSSSSSEEHHH
T ss_pred             hhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHhCCCCCCcCcHHH
Confidence                         134557899999999999999999999999876 43 4556666666    9999999999999999


Q ss_pred             HHHHHHH
Q 030405          144 VKQMVVA  150 (178)
Q Consensus       144 ~~~~l~~  150 (178)
                      |..++..
T Consensus       176 F~~~~~~  182 (208)
T 2ct9_A          176 FVKVLEK  182 (208)
T ss_dssp             HHHTTTT
T ss_pred             HHHHHhc
Confidence            9998754

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=99.36  E-value=7.5e-12  Score=100.84  Aligned_cols=132  Identities=16%  Similarity=0.264  Sum_probs=105.0

Q ss_pred             ccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--CCC
Q 030405            7 GLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--NKK   82 (178)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~~~   82 (178)
                      .|+.+|..+..+.++.++.     .++..+.....  ++..+   +...|..+|.+  ++|.|+..||..++...  ...
T Consensus       313 el~~~F~~fD~D~dG~Is~-----~EL~~~L~~lg~~~s~ee---l~~Lf~~~D~D--gdG~IsfeEFl~ll~~~~~~~~  382 (450)
T 3sg6_A          313 EFKEAFSLFDKDGDGTITT-----KELGTVMRSLGQNPTEAE---LQDMINEVDAD--GNGTIDFPEFLTMMARKMKDTD  382 (450)
T ss_dssp             HHHHHHHHHCTTCSSEECH-----HHHHHHHHHTTCCCCHHH---HHHHHHTTCTT--SSSSEEHHHHHHHHHC------
T ss_pred             HHHHHHHHHCCCCCCcCcH-----HHHHHHHHHhCCCCCHHH---HHHHHHHhccC--CCCcccHHHHHHHHHhhccccc
Confidence            4566777777777777777     77777666643  34444   55667778888  99999999999987652  223


Q ss_pred             CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           83 ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        83 ~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      ....+..+|+.+|.+++|.|+.+||..++..+.. ....+.+..+|+.+|.|++|.|+++||..+|.
T Consensus       383 ~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~-~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~  448 (450)
T 3sg6_A          383 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT  448 (450)
T ss_dssp             CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTC-CCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred             hhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            3456789999999999999999999999998876 56778899999999999999999999999873

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=99.36  E-value=1.6e-11  Score=87.58  Aligned_cols=133  Identities=14%  Similarity=0.152  Sum_probs=97.5

Q ss_pred             cchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC-CCCCHHH
Q 030405            8 LKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT-NKKESLF   86 (178)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~-~~~~~~~   86 (178)
                      ++..|..+.  .++.++.     ..+..... ...+...+..+...+...+.+  ++|.|+..+|..++... .......
T Consensus        30 ~~~~F~~~D--~dG~I~~-----~el~~~lg-~~~~~~~~~~i~~~~d~~~~~--~~~~i~~~ef~~~~~~~~~~~~~~~   99 (179)
T 3a8r_A           30 VEKRFNQLQ--VDGVLLR-----SRFGKCIG-MDGSDEFAVQMFDSLARKRGI--VKQVLTKDELKDFYEQLTDQGFDNR   99 (179)
T ss_dssp             HHHHHHHHC--BTTBEEG-----GGHHHHHT-CCSCHHHHHHHHHHHHHHHTC--CSSEECHHHHHHHHHHHHCCCHHHH
T ss_pred             HHHHHhccC--CCCCCcH-----HHHHHHHC-CCCcHHHHHHHHHHHHHhccC--CCCCcCHHHHHHHHHHHcCCCHHHH
Confidence            445555555  4666666     77776432 233566677777777665455  67889999998876442 2233456


Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHH-hhCCCCC------hhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALS-IFHPNSP------IDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~-~~~~~~~------~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      +..+|+.+|.+++|.|+.+|+..++. .+.....      .++.+..+|+.+|.|++|.|+++||..++..
T Consensus       100 l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  170 (179)
T 3a8r_A          100 LRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQ  170 (179)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC-
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            78999999999999999999999987 5543102      5678999999999999999999999999844

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=99.36  E-value=8.1e-12  Score=84.82  Aligned_cols=128  Identities=15%  Similarity=0.203  Sum_probs=101.6

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC--
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK--   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~--   81 (178)
                      .-++.+|..+..+.++.++.     ..+.......+  .+..++..+..       +  ++|.|+..+|..++.....  
T Consensus         5 ~~l~~~F~~~D~d~~G~i~~-----~el~~~l~~~g~~~~~~~~~~~~~-------~--~~g~i~~~eF~~~~~~~~~~~   70 (140)
T 1ggw_A            5 SPYKQAFSLFDRHGTGRIPK-----TSIGDLLRACGQNPTLAEITEIES-------T--LPAEVDMEQFLQVLNRPNGFD   70 (140)
T ss_dssp             TTTHHHHHHTCSSSSSEECH-----HHHHHHHHHTSCCCCHHHHHHHHT-------T--SCSSEEHHHHHHHHCTTSSSS
T ss_pred             HHHHHHHHHHCCCCCCcCCH-----HHHHHHHHHcCCCCCHHHHHHHHh-------C--CCCcCcHHHHHHHHHHHhccc
Confidence            34667788888788888877     88888766554  45666555543       4  8899999999998865321  


Q ss_pred             --CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           82 --KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        82 --~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                        .....+..+|+.+|.+++|.|+.+||..++..+.. ..+++.+..+|+.+|. ++|.|+++||..++.
T Consensus        71 ~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~  138 (140)
T 1ggw_A           71 MPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGE-KLSNEEMDELLKGVPV-KDGMVNYHDFVQMIL  138 (140)
T ss_dssp             SSCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHS-CSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHH
T ss_pred             CcccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCC-CCCHHHHHHHHHhccC-CCCcEeHHHHHHHHh
Confidence              12366789999999999999999999999988755 4567889999999999 999999999998874

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=99.35  E-value=4e-12  Score=91.75  Aligned_cols=128  Identities=15%  Similarity=0.129  Sum_probs=100.6

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNK   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~   81 (178)
                      ..|..+|..+..+.++.++.     ..+..+....+  ++..++..+...+         +|.|+..+|..++..  ...
T Consensus        57 ~~l~~~F~~~D~d~~G~i~~-----~el~~~l~~lg~~~~~~~~~~l~~~~---------~g~i~~~eF~~~~~~~~~~~  122 (196)
T 3dtp_E           57 QEFKEAFQLIDQDKDGFISK-----NDIRATFDSLGRLCTEQELDSMVAEA---------PGPINFTMFLTIFGDRIAGT  122 (196)
T ss_dssp             HHHHHHHHHHCCSCSSBCCH-----HHHHHHHHTTSCCCCHHHHHHHHTTS---------SSCCBHHHHHHHHHHCCCSS
T ss_pred             HHHHHHHHHHCCCCCCcCCH-----HHHHHHHHHhCCCCCHHHHHHHHHHc---------cCCCcHHHHHHHHHHHhcCC
Confidence            44667777777777777777     77777666643  4555544444332         589999999998865  223


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .....+..+|+.+|.+++|.|+.++|..++ .+.. ....+.+..+|+.+|.|++|.|+++||..+|.
T Consensus       123 ~~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~-~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~  188 (196)
T 3dtp_E          123 DEEDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGE-KFSQDEVDQALSEAPIDGNGLIDIKKFAQILT  188 (196)
T ss_dssp             CCHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSS-CCCHHHHHHHHHSSCEETTEECHHHHHHHHHS
T ss_pred             CcHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCC-CCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHH
Confidence            345668899999999999999999999999 7665 56778899999999999999999999999984

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.35  E-value=1.2e-12  Score=106.73  Aligned_cols=138  Identities=16%  Similarity=0.165  Sum_probs=91.5

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHH----HHhhcCCCHH---------HHHHHHHHHHhhcccCCCCCcccHHHH
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEA----LARETVFSVS---------EIEALYELFKKISSAVIDDGLINKEEF   72 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---------~i~~l~~~F~~~d~~~~~~g~i~~~ef   72 (178)
                      ..++.+|..+..+.++.++.     .++..    +....+.+..         .-..+...|..+|.+  ++|.|+..||
T Consensus       331 ~~l~~~F~~~D~d~dG~I~~-----~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d--~dG~I~~~Ef  403 (486)
T 3mwu_A          331 KQLTEIFRKLDTNNDGMLDR-----DELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMD--GSGSIEYSEF  403 (486)
T ss_dssp             HHHHHHHHHHCTTCSSSBCH-----HHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTT--CCSSBCHHHH
T ss_pred             HHHHHHHHHhCCCCCceeeH-----HHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCC--CCCcCcHHHH
Confidence            45677788888888888877     66633    2222222221         134577788888998  9999999999


Q ss_pred             HHHHhcC-CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           73 QLALFKT-NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        73 ~~~l~~~-~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ..++... .......+..+|+.+|.+++|.|+.+||..++..... ...++.+..+|+.+|.|++|.|+.+||..++..+
T Consensus       404 ~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~-~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~  482 (486)
T 3mwu_A          404 IASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADS-SIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF  482 (486)
T ss_dssp             HHHHSCTTTTCCHHHHHHHHHHHCSSCSSSBCSSCC---------------------CCCCSSCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHhhhccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC-CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            8877552 2334566889999999999999999999999887654 4566789999999999999999999999999776

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.35  E-value=2.8e-12  Score=89.28  Aligned_cols=128  Identities=14%  Similarity=0.099  Sum_probs=101.7

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCC--HHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--CC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFS--VSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--NK   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~~   81 (178)
                      .-++.+|..+..+.++.++.     ..+....+..+..  ..++..+       ..+  .+|.|+..+|..++...  ..
T Consensus        16 ~elk~~F~~~D~d~dG~I~~-----~El~~~l~~lg~~~~~~~~~~~-------~~~--~~~~i~f~ef~~~~~~~~~~~   81 (153)
T 3i5g_B           16 QELKEAFTMIDQDRDGFIGM-----EDLKDMFSSLGRVPPDDELNAM-------LKE--CPGQLNFTAFLTLFGEKVSGT   81 (153)
T ss_dssp             HHHHHHHHHHCCSTTSCCCH-----HHHHHHHHHTTSCCCHHHHHHH-------HHT--SSSCCCSHHHHHTTTTTTTTC
T ss_pred             HHHHHHHHHHCCCCCCeEcH-----HHHHHHHHHcCCCccHHHHHHH-------HHh--ccCCccHHHHHHHHHhhhccc
Confidence            45677888888888888888     8888877776554  4343322       223  67889999999887552  23


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .....+..+|+.||.+++|.|+.+++..++..+.. ..+++.+..+++.+|.+ +|.|+++||.++|.
T Consensus        82 ~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~-~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~  147 (153)
T 3i5g_B           82 DPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGD-NFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKG  147 (153)
T ss_dssp             CCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSS-CCCHHHHHHHHTTCCEE-TTEECHHHHHHHHH
T ss_pred             ccHHHHHHHHhccccCCCCeEeHHHHHHHHHHcCC-cCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhc
Confidence            34566899999999999999999999999998776 56788899999999987 99999999999984

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=99.34  E-value=5.4e-12  Score=89.73  Aligned_cols=131  Identities=14%  Similarity=0.146  Sum_probs=92.6

Q ss_pred             ccchhhhhhhc-----cc-C--ccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCc-ccHHHHHHHHh
Q 030405            7 GLKHFCVVVVN-----CC-D--ADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGL-INKEEFQLALF   77 (178)
Q Consensus         7 ~~~~~~~~~~~-----~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~-i~~~ef~~~l~   77 (178)
                      .|..+|..+..     +. +  +.++.     ..+.. ....+.+...    ...|..+|.+  ++|. |+..+|..++.
T Consensus        21 ~l~~~F~~~D~~~~~~~~~~~~G~i~~-----~el~~-l~~~g~~~~~----~~l~~~~D~d--~~G~~I~~~EF~~~~~   88 (183)
T 1dgu_A           21 LAHRRFCELLPQEQRSVESSLRAQVPF-----EQILS-LPELKANPFK----ERICRVFSTS--PAKDSLSFEDFLDLLS   88 (183)
T ss_dssp             HHHHHHHHHSCSTTCSSCCCTTTCSCH-----HHHHT-STTSSSCTTH----HHHHHHHSCS--SSSCCCCHHHHHHHHH
T ss_pred             HHHHHHHHhCccccccccccccCcCcH-----HHHHH-HHhhhcCcHH----HHHHHHhCCC--CCCCEecHHHHHHHHH
Confidence            34455555554     33 4  56655     66666 3333333221    2456667888  9999 99999999876


Q ss_pred             cCC--CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC----CCChhHHHHH----HHHhhCCCCCCceeHHHHHHH
Q 030405           78 KTN--KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHP----NSPIDDKIEF----SFQLYDLKQQGFIERQEVKQM  147 (178)
Q Consensus        78 ~~~--~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~----~~~~~e~~~~----~F~~~D~d~~G~I~~~e~~~~  147 (178)
                      ...  ......+..+|+.+|.+++|.|+.+||..++..+..    .....+.+..    +|+.+|.|++|.|+++||..+
T Consensus        89 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~  168 (183)
T 1dgu_A           89 VFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHV  168 (183)
T ss_dssp             HHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHH
T ss_pred             HhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHH
Confidence            522  222346889999999999999999999999887643    1123455554    999999999999999999998


Q ss_pred             HH
Q 030405          148 VV  149 (178)
Q Consensus       148 l~  149 (178)
                      +.
T Consensus       169 ~~  170 (183)
T 1dgu_A          169 IS  170 (183)
T ss_dssp             HC
T ss_pred             HH
Confidence            74

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=99.33  E-value=3.3e-13  Score=99.71  Aligned_cols=139  Identities=14%  Similarity=0.063  Sum_probs=101.7

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHH-HHhhcCCC--HHHHHHHH-HHHHhh-----cccCCCCCcccHHHHHHHH
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEA-LARETVFS--VSEIEALY-ELFKKI-----SSAVIDDGLINKEEFQLAL   76 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~i~~l~-~~F~~~-----d~~~~~~g~i~~~ef~~~l   76 (178)
                      ..++.+|..+..+.++.++.     ..+.. +.+..+++  ..++..+. ..|..+     |.+  ++|.|+..+|..++
T Consensus        51 ~~l~~~F~~~D~d~dG~Is~-----~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d--~~G~I~~~EF~~~~  123 (226)
T 2lvv_A           51 SRRIELFKQFDTNGTGKLGF-----REVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVK--GVGEEDLVEFLEFR  123 (226)
T ss_dssp             HHHHHHHHHHGGGSCSCBCS-----HHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHS--CCCCCSCBCHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcH-----HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCC--CCCcCCHHHHHHHH
Confidence            44667788888888888888     88887 66654443  33444443 334444     778  89999999998853


Q ss_pred             hc-CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           77 FK-TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        77 ~~-~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .. ........+..+|+.+|.+++|.|+.+||..++..+...+...+.+..+|+.+|.|++|.|+++||..++..-
T Consensus       124 ~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~Is~~EF~~~~~~~  199 (226)
T 2lvv_A          124 LMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEFSCWAVTK  199 (226)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSCEEHHHHHHHHHHH
T ss_pred             HHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence            22 1112234578999999999999999999999997651101122348999999999999999999999999764

>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=99.32  E-value=1.9e-13  Score=90.50  Aligned_cols=100  Identities=19%  Similarity=0.254  Sum_probs=84.3

Q ss_pred             hcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHH-----hhcccCCCCCcccHHHHHHHHhc--CCC-CCHHHH
Q 030405           16 VNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFK-----KISSAVIDDGLINKEEFQLALFK--TNK-KESLFA   87 (178)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~-----~~d~~~~~~g~i~~~ef~~~l~~--~~~-~~~~~~   87 (178)
                      ||+..+.++|     +.+.++++.+.++..+|+.|++.|.     ..+    ++|.|+.++|..++..  ... .++.++
T Consensus         1 Mg~~~s~lsp-----e~l~~L~~~t~fs~~elk~~y~~F~~g~~~k~c----p~G~i~~e~F~~i~~~ffp~~~~p~~~~   71 (118)
T 1tuz_A            1 MAKERGLISP-----SDFAQLQKYMEYSTKKVSDVLKLFEDGEMAKYV----QGDAIGYEGFQQFLKIYLEVDNVPRHLS   71 (118)
T ss_dssp             CCCCCSCSCH-----HHHHHHHHHHHHCCCCHHHHHHHHHTSGGGGGE----ETTEECHHHHHHHHHHHTTCSSCCHHHH
T ss_pred             CCcccCcCCH-----HHHHHHHHHcccCHHHHHHHHHHHccccccccC----CCCCCCHHHHHHHHHHhCcCCCCHHHHH
Confidence            7888888888     9999999999999999999999995     344    5799999999998866  222 667889


Q ss_pred             HHHHHHHhcCC--------CCcccHHHHHHHHHhhCCCCChhHHHH
Q 030405           88 DRVFDLFDTKH--------NGILDFEEFARALSIFHPNSPIDDKIE  125 (178)
Q Consensus        88 ~~lf~~~d~~~--------~g~i~~~ef~~~~~~~~~~~~~~e~~~  125 (178)
                      +.+|+.||.++        +|.|+|.||+..++.+.+ +.+++++.
T Consensus        72 ~~lF~~Fd~~~~~~~~~~~~g~I~fkefi~~LSll~r-G~~edKLe  116 (118)
T 1tuz_A           72 LALFQSFETGHCLNETNVTKDVVCLNDVSCYFSLLEG-GRPEDKLE  116 (118)
T ss_dssp             HHHHHHSCCCCCTTCCCCCSCCEEHHHHHHHHHHHHS-CCCSCCCC
T ss_pred             HHHHHHHhcccccccccCCCCeEeHHHHHHHHHHhcC-CCHHHhhc
Confidence            99999999874        799999999999998876 66666543

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=99.32  E-value=1.4e-12  Score=92.86  Aligned_cols=138  Identities=22%  Similarity=0.215  Sum_probs=101.1

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhc------C--CCHHHHHHHH------HHHHhhcccCCCCCcccHHH
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARET------V--FSVSEIEALY------ELFKKISSAVIDDGLINKEE   71 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~i~~l~------~~F~~~d~~~~~~g~i~~~e   71 (178)
                      ..++.+|..+..+.++.++.     ..+.......      +  .+..++..+.      ..|..+|.+  ++|.|+..+
T Consensus        14 ~~l~~~F~~~D~d~dG~i~~-----~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d--~dg~I~~~E   86 (186)
T 2hps_A           14 RKMKTRMQRVDVTGDGFISR-----EDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRIS--VEEAAVNAT   86 (186)
T ss_dssp             HHHHHHHHTTCTTCSSEEEH-----HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEE--HHHHHHHHH
T ss_pred             HHHHHHhhhcCCCCCCccCH-----HHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCC--CCCcccHHH
Confidence            34667777777777888877     7777765532      2  2344455444      336788888  899999999


Q ss_pred             HHHHHhcCCCCCH--HHHHHHH--HHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHH
Q 030405           72 FQLALFKTNKKES--LFADRVF--DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQM  147 (178)
Q Consensus        72 f~~~l~~~~~~~~--~~~~~lf--~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~  147 (178)
                        .++........  ..+...|  ..||.+++|.|+++||..++..+.. ..+++.+..+|+.+|.|++|.|+++||..+
T Consensus        87 --~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~-~~~~~~~~~~~~~~D~d~dG~i~~~ef~~~  163 (186)
T 2hps_A           87 --DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGP-DLTDDKAITCFNTLDFNKNGQISRDEFLVT  163 (186)
T ss_dssp             --HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCT-TCCHHHHHHHHHHHCTTCSSEEEHHHHHHH
T ss_pred             --HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCC-CCCHHHHHHHHHHHcCCCCCcCcHHHHHHH
Confidence              44443222111  1123333  7789999999999999999988865 467788999999999999999999999999


Q ss_pred             HHHHHh
Q 030405          148 VVATLT  153 (178)
Q Consensus       148 l~~~~~  153 (178)
                      +..++.
T Consensus       164 ~~~~~~  169 (186)
T 2hps_A          164 VNDFLF  169 (186)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            988753

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=99.32  E-value=1.3e-12  Score=109.58  Aligned_cols=115  Identities=14%  Similarity=0.169  Sum_probs=48.5

Q ss_pred             HHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHH
Q 030405           48 EALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEF  126 (178)
Q Consensus        48 ~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~  126 (178)
                      ..+++.|..+|.+  ++|.|+..+|..++...+.. ....++.+|+.+|.+++|.|+|+||..++..+..    +++++.
T Consensus        11 ~~l~~~F~~fD~d--~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~----~~el~~   84 (624)
T 1djx_A           11 HWIHSCLRKADKN--KDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ----RAEIDR   84 (624)
T ss_dssp             -----------------------------------------------------------CTTHHHHHHTC----CHHHHH
T ss_pred             HHHHHHHHHhCCC--CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc----HHHHHH
Confidence            3578899999999  99999999999998774432 3456789999999999999999999999987754    367999


Q ss_pred             HHHhhCCCCCCceeHHHHHHHHHHHHhhcCCC-CCHHHHHHHHHHHH
Q 030405          127 SFQLYDLKQQGFIERQEVKQMVVATLTESGMN-LSDDVIESIIDKVL  172 (178)
Q Consensus       127 ~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~-l~~~~~~~~~~~~~  172 (178)
                      +|+.||.+ +|+|+.+||+++|...   .|.. +++++++++++++-
T Consensus        85 aF~~fD~~-~G~Is~~EL~~fL~~~---qge~~ls~ee~~~ii~~~d  127 (624)
T 1djx_A           85 AFEEAAGS-AETLSVERLVTFLQHQ---QREEEAGPALALSLIERYE  127 (624)
T ss_dssp             HHHHHHTT-SSSEEHHHHHHHHHHT---SCCSSCSHHHHHHHHHHHC
T ss_pred             HHHHhcCC-CCeecHHHHHHHHHHH---hCCCCCCHHHHHHHHHHhC
Confidence            99999985 9999999999999654   2555 89999888887763

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=99.31  E-value=2e-12  Score=89.06  Aligned_cols=90  Identities=17%  Similarity=0.124  Sum_probs=46.0

Q ss_pred             HHHHHHHhcCCCCcccHHHHHHHHHhhCC----CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhh----cCCCC
Q 030405           88 DRVFDLFDTKHNGILDFEEFARALSIFHP----NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE----SGMNL  159 (178)
Q Consensus        88 ~~lf~~~d~~~~g~i~~~ef~~~~~~~~~----~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~----~~~~l  159 (178)
                      ..+|+.+|.+++|.|+++||...+.....    .....+.++.+|+.||.|++|+|+.+||..++..+...    .+..+
T Consensus        30 ~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~  109 (143)
T 3a4u_B           30 FSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLM  109 (143)
T ss_dssp             ---------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------C
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCC
Confidence            57899999999999999999988776532    12456789999999999999999999999998776321    13578


Q ss_pred             CHHHHHHHHHHHHhhccC
Q 030405          160 SDDVIESIIDKVLSLIQL  177 (178)
Q Consensus       160 ~~~~~~~~~~~~~~~~D~  177 (178)
                      +++++..+++.+|..+|.
T Consensus       110 s~~e~~~~~~~~f~~~D~  127 (143)
T 3a4u_B          110 SEDELINIIDGVLRDDDK  127 (143)
T ss_dssp             CHHHHHHHHHHHHHHHCT
T ss_pred             CHHHHHHHHHHHHHHcCC
Confidence            999999999999998874

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=99.30  E-value=1.8e-12  Score=89.37  Aligned_cols=98  Identities=16%  Similarity=0.187  Sum_probs=49.0

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhcCC------CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC------
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFKTN------KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHP------  116 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~------~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~------  116 (178)
                      .-...|..+|.+  ++|.|+..||..++....      ......+..+|+.+|.+++|.|+++||..++..+..      
T Consensus        28 ~~~~~f~~~D~d--~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~  105 (143)
T 3a4u_B           28 ASFSQPGSMGLD--KNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQ  105 (143)
T ss_dssp             -------------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC----------
T ss_pred             CCHHHHHHhCCC--CCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhcccc
Confidence            344678889999  999999999998875531      123455788999999999999999999998876531      


Q ss_pred             -CCChhHHH----HHHHHhhCCCCCCceeHHHHHHHH
Q 030405          117 -NSPIDDKI----EFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus       117 -~~~~~e~~----~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                       .....+.+    ..+|+.+|.|++|.|+++||..++
T Consensus       106 g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~  142 (143)
T 3a4u_B          106 APLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL  142 (143)
T ss_dssp             ---CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence             11233344    667799999999999999998765

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=99.30  E-value=7.8e-13  Score=115.29  Aligned_cols=116  Identities=23%  Similarity=0.310  Sum_probs=86.2

Q ss_pred             CCHHH-HHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC---------CCCHHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 030405           42 FSVSE-IEALYELFKKISSAVIDDGLINKEEFQLALFKTN---------KKESLFADRVFDLFDTKHNGILDFEEFARAL  111 (178)
Q Consensus        42 ~~~~~-i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~---------~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~  111 (178)
                      +++++ +++++..|..+| +  ++|.|+..+|..++....         ......++.+|+.+|.+++|.|+|+||...+
T Consensus       527 l~~~e~~~~l~~~F~~~D-~--~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~  603 (900)
T 1qxp_A          527 LSEEEIDDNFKTLFSKLA-G--DDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILW  603 (900)
T ss_dssp             --------------CCCC-C--SSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHH
T ss_pred             CCcchHHHHHHHHHHHHc-C--CCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence            44444 889999999999 8  999999999999886633         3345678999999999999999999999998


Q ss_pred             HhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          112 SIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       112 ~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ..+       +.++.+|+.||.|++|.|+.+||..+|..+    |..+++++++.++..+
T Consensus       604 ~~~-------~~l~~~F~~~D~d~~G~Is~~El~~~l~~~----g~~l~~~~~~~l~~~~  652 (900)
T 1qxp_A          604 NRI-------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAA----GFKLPCQLHQVIVARF  652 (900)
T ss_dssp             HHH-------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHT----TEECCHHHHHHHHHHT
T ss_pred             HHH-------HHHHHHHHhhCCCCCCeECHHHHHHHHHHh----CCCCCHHHHHHHHHHh
Confidence            765       679999999999999999999999999776    7778888877766553

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=99.29  E-value=8.3e-13  Score=90.05  Aligned_cols=84  Identities=7%  Similarity=0.042  Sum_probs=47.0

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcC-CCCCHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG-MNLSDDV  163 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~-~~l~~~~  163 (178)
                      +..+.+|+.+|.+++|.|+|+||..++..........+.++.+|+.||.|++|+|+.+||..++..+    | ..++.++
T Consensus         3 p~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~----g~~~~~~~e   78 (135)
T 3h4s_E            3 PTEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGIL----GIEGMSKED   78 (135)
T ss_dssp             ----------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGG----TCCCCCHHH
T ss_pred             hhHHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHh----CCCCCCHHH
Confidence            3457899999999999999999999887654323345779999999999999999999999998765    7 4899999


Q ss_pred             HHHHHHHHH
Q 030405          164 IESIIDKVL  172 (178)
Q Consensus       164 ~~~~~~~~~  172 (178)
                      ++.++..+-
T Consensus        79 ~~~~~~~~D   87 (135)
T 3h4s_E           79 AQGMVREGD   87 (135)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            887766553

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=99.26  E-value=1.6e-11  Score=85.10  Aligned_cols=88  Identities=10%  Similarity=0.126  Sum_probs=68.0

Q ss_pred             HHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhH
Q 030405           44 VSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDD  122 (178)
Q Consensus        44 ~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e  122 (178)
                      ..++..+...|..+|.+  ++|.|+..+|..++...+. .....++.+|..+|.+++|.|+|+||+.++...      .+
T Consensus        46 ~~~~~~l~~~F~~~D~d--~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~------~~  117 (150)
T 2jjz_A           46 PEKLTAFKEKYMEFDLN--NEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK------RS  117 (150)
T ss_dssp             HHHHHHHHHHHTTSCCC--TTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS------SC
T ss_pred             HHHHHHHHHHHHHhCCC--CcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh------HH
Confidence            56788999999999999  9999999999999877543 345678999999999999999999999988654      23


Q ss_pred             HHHHHHHhhCCCCCCce
Q 030405          123 KIEFSFQLYDLKQQGFI  139 (178)
Q Consensus       123 ~~~~~F~~~D~d~~G~I  139 (178)
                      .++.+|+.||.+++|.-
T Consensus       118 ~i~~aF~~~D~d~~G~~  134 (150)
T 2jjz_A          118 AVLKLVMMFEGKANESS  134 (150)
T ss_dssp             CHHHHHHC---------
T ss_pred             HHHHHHHHHcCCCCCCC
Confidence            48999999999999983

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=99.25  E-value=9.6e-11  Score=99.83  Aligned_cols=128  Identities=14%  Similarity=0.190  Sum_probs=94.8

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhc----------CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHH
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARET----------VFSVSEIEALYELFKKISSAVIDDGLINKEEFQL   74 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~   74 (178)
                      ...++.+|..+. +.++.++.     .++..+....          .++.++++   ..|..+|.+  ++|.|+.+||..
T Consensus       531 ~~~l~~~F~~~D-d~dG~Is~-----~El~~~L~~l~~~~~~~~g~~~s~~~~~---~l~~~~D~d--~~G~I~f~EF~~  599 (714)
T 3bow_A          531 GDGFRRLFAQLA-GEDAEISA-----FELQTILRRVLAKREDIKSDGFSIETCK---IMVDMLDED--GSGKLGLKEFYI  599 (714)
T ss_dssp             CHHHHHHHHHHH-GGGTSBCH-----HHHHHHHHHHHTTCTTSCCSCCCHHHHH---HHHHHHCCS--SCSSBCHHHHHH
T ss_pred             HHHHHHHHHHHc-CCCCcCCH-----HHHHHHHHHHhhhcccccCCCCCHHHHH---HHHHHhCCC--CCCcCcHHHHHH
Confidence            445667777777 67777766     7777766553          56666544   445556777  888899999888


Q ss_pred             HHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           75 ALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        75 ~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ++...     ..+..+|+.+|.+++|.|+.+||..++..+.. ....+.+..+|+.+| |++|.|+.+||..++..
T Consensus       600 l~~~~-----~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~-~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~  668 (714)
T 3bow_A          600 LWTKI-----QKYQKIYREIDVDRSGTMNSYEMRKALEEAGF-KLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR  668 (714)
T ss_dssp             HHHHH-----HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTE-ECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHH
T ss_pred             HHHHH-----HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCC-CCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence            76543     44678888888888888999998888877654 356677888888888 88888888888888764

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=99.24  E-value=9.2e-11  Score=80.16  Aligned_cols=126  Identities=12%  Similarity=0.105  Sum_probs=99.0

Q ss_pred             cccchhhhhhhccc-CccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--C
Q 030405            6 DGLKHFCVVVVNCC-DADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--N   80 (178)
Q Consensus         6 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~   80 (178)
                      ..++.+|..+..+. ++.++.     ..+.......+  ++..++.   ..|..+|    .+  |+..+|..++...  .
T Consensus        14 ~~l~~~F~~~D~d~~~G~i~~-----~el~~~l~~~g~~~~~~~~~---~l~~~~d----~~--i~~~eF~~~~~~~~~~   79 (146)
T 2qac_A           14 VDESDVRIYFNEKSSGGKISI-----DNASYNARKLGLAPSSIDEK---KIKELYG----DN--LTYEQYLEYLSICVHD   79 (146)
T ss_dssp             SCHHHHHHHHHHHCBTTBEEH-----HHHHHHHHHTTCCCCHHHHH---HHHHHHC----SE--ECHHHHHHHHHHTCCT
T ss_pred             HHHHHHHHHhCccCCCCcccH-----HHHHHHHHHhCCCCCHHHHH---HHHHHhC----CC--CCHHHHHHHHHHHhcC
Confidence            45677888888887 888877     78887766654  4455544   4455555    23  9999999988642  2


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           81 KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        81 ~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ......+..+|+.+|.+++|.|+.++|..++..+.. ..+++.+..+|+.+  |++|.|+++||..++
T Consensus        80 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l  144 (146)
T 2qac_A           80 KDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGD-ALTDQEAIDALNAF--SSEDNIDYKLFCEDI  144 (146)
T ss_dssp             TCCHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSS-CCCHHHHHHHHHHH--CSSSEEEHHHHHHHH
T ss_pred             cchHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCC-CCCHHHHHHHHHHc--CCCCcCcHHHHHHHH
Confidence            334566889999999999999999999999988765 56778899999999  999999999999887

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=99.24  E-value=1.3e-11  Score=85.40  Aligned_cols=88  Identities=17%  Similarity=0.183  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhH
Q 030405           44 VSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDD  122 (178)
Q Consensus        44 ~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e  122 (178)
                      ..++..+...|..+|.+  ++|.|+..+|..++...+. .....++.+|..+|.+++|.|+|+||+.++...      .+
T Consensus        44 ~~~~~~l~~~F~~~D~d--~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~------~~  115 (147)
T 1wy9_A           44 PSKLEAFKVKYMEFDLN--GNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK------RS  115 (147)
T ss_dssp             HHHHHHHHHHHTTSCCC--TTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS------GG
T ss_pred             HHHHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh------HH
Confidence            57889999999999999  9999999999999877543 345678999999999999999999999988532      45


Q ss_pred             HHHHHHHhhCCCCCCce
Q 030405          123 KIEFSFQLYDLKQQGFI  139 (178)
Q Consensus       123 ~~~~~F~~~D~d~~G~I  139 (178)
                      .+..+|+.||.+++|..
T Consensus       116 ~~~~aF~~~D~d~~g~~  132 (147)
T 1wy9_A          116 AILRMILMYEEKNKEHK  132 (147)
T ss_dssp             GGGGGGGGCCCC-----
T ss_pred             HHHHHHHHHccCCCCCC
Confidence            68899999999999984

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=99.23  E-value=4.3e-11  Score=87.63  Aligned_cols=97  Identities=15%  Similarity=0.269  Sum_probs=76.3

Q ss_pred             HHHHhhcccCCCCCc-ccHHHHHHHHhcCCC--CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC----CCChhHHH
Q 030405           52 ELFKKISSAVIDDGL-INKEEFQLALFKTNK--KESLFADRVFDLFDTKHNGILDFEEFARALSIFHP----NSPIDDKI  124 (178)
Q Consensus        52 ~~F~~~d~~~~~~g~-i~~~ef~~~l~~~~~--~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~----~~~~~e~~  124 (178)
                      ..|..+|.+  ++|. |+..+|..++.....  .....+..+|+.+|.+++|.|+.+||..++..+..    ....++.+
T Consensus        95 ~lf~~~D~d--~dG~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~  172 (214)
T 2l4h_A           95 RICRVFSTS--PAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM  172 (214)
T ss_dssp             HHHHHHCCS--SSCCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHH
T ss_pred             HHHHHhCcC--CCCCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHH
Confidence            457777888  9999 999999998865322  23456889999999999999999999998876532    01223333


Q ss_pred             ----HHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          125 ----EFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       125 ----~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                          ..+|+.+|.|++|.|+++||..++..
T Consensus       173 ~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  202 (214)
T 2l4h_A          173 KQLIDNILEESDIDRDGTINLSEFQHVISR  202 (214)
T ss_dssp             HHHHHHHHHHHCCSCCSSBCSHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence                45999999999999999999998853

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=99.23  E-value=1e-10  Score=73.10  Aligned_cols=72  Identities=22%  Similarity=0.279  Sum_probs=60.1

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      .++++++..+...|..+|.+  ++|.|+..+|..++...+......++.+|+.+|.+++|.|+|+||+.++...
T Consensus         4 ~~~~~~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   75 (86)
T 2opo_A            4 EDTPQDIADRERIFKRFDTN--GDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   75 (86)
T ss_dssp             --CHHHHHHHHHHHHHHCTT--CSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             cCCHhhHHHHHHHHHHHCCC--CCCCcCHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence            47888889999999999998  9999999999998877554455678899999999999999999999888765

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=99.22  E-value=2.2e-11  Score=78.83  Aligned_cols=73  Identities=26%  Similarity=0.413  Sum_probs=60.5

Q ss_pred             HhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 030405           37 ARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARAL  111 (178)
Q Consensus        37 ~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~  111 (178)
                      .....+++++++.++++|..+|.+  ++|.|+..+|..++...+. .....++.+|+.+|.+++|.|+|+||+.++
T Consensus        25 ~~~~~l~~~~~~el~~~F~~~D~d--~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           25 QRPVDIPEDELEEIREAFKVFDRD--GNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             CSCCCCCGGGHHHHHHHHHHTCSS--CSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             cccccCCHHHHHHHHHHHHHHcCC--CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            334568888999999999999999  9999999999999877443 234557889999999999999999998765

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=99.20  E-value=1.7e-11  Score=105.22  Aligned_cols=112  Identities=13%  Similarity=0.193  Sum_probs=80.6

Q ss_pred             HHHHHHHHH--hhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhc-------CCCCcccHHHHHHHHHhhCCC
Q 030405           47 IEALYELFK--KISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDT-------KHNGILDFEEFARALSIFHPN  117 (178)
Q Consensus        47 i~~l~~~F~--~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~-------~~~g~i~~~ef~~~~~~~~~~  117 (178)
                      -..|++.|.  .+|.+  ++|.|+..++..++..    .+..++.+++.+|.       +++|.|+|+||..++..+.. 
T Consensus       145 ~~~Lk~~F~~~~fD~d--~dG~Is~~EL~~~l~~----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~~-  217 (799)
T 2zkm_X          145 STFLDKILVKLKMQLN--SEGKIPVKNFFQMFPA----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP-  217 (799)
T ss_dssp             HHHHHHHHHHHHHSCC--TTSCEEHHHHHHHSCS----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC-
T ss_pred             HHHHHHHhHHhccCCC--CCCeECHHHHHHHHhh----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHccC-
Confidence            345788888  78999  9999999999998854    25667889998884       67789999999999988753 


Q ss_pred             CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCC---------CCHHHHHHHHHHH
Q 030405          118 SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN---------LSDDVIESIIDKV  171 (178)
Q Consensus       118 ~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~---------l~~~~~~~~~~~~  171 (178)
                         +++++.+|+.||.+++|+|+.+||+++|..+.   |..         +++++++++++++
T Consensus       218 ---r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Q---ge~~~~~~~~~~~t~ee~~~iI~~~  274 (799)
T 2zkm_X          218 ---RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQ---RDSRLNSLLFPPARPDQVQGLIDKY  274 (799)
T ss_dssp             ---CHHHHTTCC--------CCCHHHHHHHHHHTC---C---------------CHHHHHHHH
T ss_pred             ---HHHHHHHHHHhccCCCCeEcHHHHHHHHHHhc---CCcccccccccCCCHHHHHHHHHHh
Confidence               47799999999999999999999999997752   333         6778888777765

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=99.20  E-value=2.5e-10  Score=74.40  Aligned_cols=83  Identities=16%  Similarity=0.264  Sum_probs=67.4

Q ss_pred             CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHH
Q 030405           83 ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDD  162 (178)
Q Consensus        83 ~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~  162 (178)
                      ....++.+++.+|  ++|.|+|+||...+...   ....+.++.+|+.||.|++|+|+.+||..++..+. ..|.+++++
T Consensus         8 ~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~-~~g~~~~~~   81 (109)
T 1bu3_A            8 ADADVAAALKACE--AADSFNYKAFFAKVGLT---AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFS-AGARALTDA   81 (109)
T ss_dssp             CHHHHHHHHHHTC--STTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHS-TTCCCCCHH
T ss_pred             CHHHHHHHHHHhC--CCCcCcHHHHHHHHHcC---hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHc-ccCCCCCHH
Confidence            4566788999998  78999999999987532   34567899999999999999999999999998762 115678999


Q ss_pred             HHHHHHHHH
Q 030405          163 VIESIIDKV  171 (178)
Q Consensus       163 ~~~~~~~~~  171 (178)
                      +++.++..+
T Consensus        82 ~~~~~~~~~   90 (109)
T 1bu3_A           82 ETKAFLKAG   90 (109)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            888776655

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=99.19  E-value=3.7e-12  Score=83.14  Aligned_cols=100  Identities=20%  Similarity=0.251  Sum_probs=78.3

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC--CCCC
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFH--PNSP  119 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~--~~~~  119 (178)
                      +++.+++.+.   ..+|    ++|.|+..+|..++... ......++.+|+.+|.+++|.|+.+||..++..+.  ....
T Consensus         6 ~~~~e~~~l~---~~~d----~~g~i~~~eF~~~~~~~-~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   77 (108)
T 2kyc_A            6 LSPSDIAAAL---RDCQ----APDSFSPKKFFQISGMS-KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVL   77 (108)
T ss_dssp             SCHHHHHHHH---TTSC----STTTCCHHHHHHHHTCT-TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCC
T ss_pred             CCHHHHHHHH---HHcC----CCCcCCHHHHHHHHhhC-cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCC
Confidence            5666655554   4445    57899999999987442 22233468999999999999999999999988872  1145


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      ..+.++.+|+.+|.|++|.|+++||..++.
T Consensus        78 ~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  107 (108)
T 2kyc_A           78 TASETKTFLAAADHDGDGKIGAEEFQEMVQ  107 (108)
T ss_dssp             CTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence            567789999999999999999999998874

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=99.19  E-value=3e-10  Score=71.81  Aligned_cols=86  Identities=16%  Similarity=0.276  Sum_probs=63.7

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC-
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP-  119 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~-  119 (178)
                      .+..+...+...|..+|.+  ++|.|+..+|..++...+. .....+..+|..+|.+++|.|+|++|+.++........ 
T Consensus         3 ~~~~~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~   80 (92)
T 2kn2_A            3 MDTDAEEELKEAFKVFDKD--QNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGG   80 (92)
T ss_dssp             CCCHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCC
T ss_pred             CCccHHHHHHHHHHHHCCC--CCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCC
Confidence            3456677888889888888  8899999999888876443 34566788899999888899999999888876654321 


Q ss_pred             -hhHHHHHHHH
Q 030405          120 -IDDKIEFSFQ  129 (178)
Q Consensus       120 -~~e~~~~~F~  129 (178)
                       ..++++.+|+
T Consensus        81 ~~~~~l~~aF~   91 (92)
T 2kn2_A           81 NGWSRLRRKFS   91 (92)
T ss_dssp             HHHHHHHHHHT
T ss_pred             chHHHHHHHhc
Confidence             2255666664

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=99.18  E-value=4.1e-11  Score=80.08  Aligned_cols=90  Identities=19%  Similarity=0.332  Sum_probs=65.9

Q ss_pred             HHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc------CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC-
Q 030405           44 VSEIEALYELFKKISSAVIDDGLINKEEFQLALFK------TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHP-  116 (178)
Q Consensus        44 ~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~------~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~-  116 (178)
                      +..+..|...|+.+|.+   +|+|+..||+.+|..      ........++++++.+|.|++|.|+|+||+.++..+.. 
T Consensus        11 E~~ie~l~~~F~~yd~d---dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~~   87 (121)
T 4drw_A           11 EHAMETMMFTFHKFAGD---KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIA   87 (121)
T ss_dssp             HHHHHHHHHTTGGGSCT---TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCC---CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHH
Confidence            34578999999999975   699999999999864      22334556899999999999999999999988764321 


Q ss_pred             -------C-------CChhHHHHHHHHhhCCCCC
Q 030405          117 -------N-------SPIDDKIEFSFQLYDLKQQ  136 (178)
Q Consensus       117 -------~-------~~~~e~~~~~F~~~D~d~~  136 (178)
                             .       ..+++.++.+|+.+|.|||
T Consensus        88 ~he~f~~~~k~~~~~~~~d~~~~e~~~~~d~~gd  121 (121)
T 4drw_A           88 CNDYFVVHMKQENLYFQGDSTVHEILSKLSLEGD  121 (121)
T ss_dssp             HHHHHTTSCC---------CCHHHHHHHCCC---
T ss_pred             HHHHHHHHHHHhccCCCCchHHHHHHHHhcccCC
Confidence                   0       1223447788888888775

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=99.17  E-value=9.7e-11  Score=76.38  Aligned_cols=84  Identities=15%  Similarity=0.246  Sum_probs=67.6

Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD  161 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~  161 (178)
                      .....++.+|+.+|  ++|.|+|+||...+...   ....+.++.+|+.||.|++|+|+.+|+..++..+. ..|.++++
T Consensus         7 ~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~-~~~~~~~~   80 (109)
T 3fs7_A            7 LSAKDIESALSSCQ--AADSFNYKSFFSTVGLS---SKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFS-SSARVLTS   80 (109)
T ss_dssp             SCHHHHHHHHHHTC--STTCCCHHHHHHHHTCT---TCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTC-TTSCCCCH
T ss_pred             CCHHHHHHHHHhcC--CCCcCcHHHHHHHHhcC---CCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHh-cccccCCH
Confidence            34566789999998  68999999999988642   45678899999999999999999999999876541 11678999


Q ss_pred             HHHHHHHHHH
Q 030405          162 DVIESIIDKV  171 (178)
Q Consensus       162 ~~~~~~~~~~  171 (178)
                      ++++.+++.+
T Consensus        81 ~~~~~~~~~~   90 (109)
T 3fs7_A           81 AETKAFLAAG   90 (109)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            8887766654

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=99.17  E-value=2.7e-10  Score=74.21  Aligned_cols=83  Identities=20%  Similarity=0.398  Sum_probs=67.8

Q ss_pred             CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHH
Q 030405           83 ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDD  162 (178)
Q Consensus        83 ~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~  162 (178)
                      ....++.+++.+|.  +|.|+|+||+..+...   ....+.++.+|+.||.|++|+|+.+|+..++..+. ..|.+++++
T Consensus         7 s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~-~~g~~~~~~   80 (109)
T 5pal_A            7 KADDINKAISAFKD--PGTFDYKRFFHLVGLK---GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFS-AHGRDLNDT   80 (109)
T ss_dssp             CHHHHHHHHHHTCS--TTCCCHHHHHHHHTCT---TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHC-TTCCCCCHH
T ss_pred             CHHHHHHHHHHhCC--CCcCcHHHHHHHHhhc---cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH-HcCCCCCHH
Confidence            45567889999987  8899999999988642   45678899999999999999999999999987751 126789998


Q ss_pred             HHHHHHHHH
Q 030405          163 VIESIIDKV  171 (178)
Q Consensus       163 ~~~~~~~~~  171 (178)
                      +++.++..+
T Consensus        81 ~~~~~~~~~   89 (109)
T 5pal_A           81 ETKALLAAG   89 (109)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            887766654

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=99.17  E-value=4.5e-12  Score=93.05  Aligned_cols=139  Identities=17%  Similarity=0.098  Sum_probs=98.0

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhh-cCC--CHHHHHHHHH-HHHhh-----cccCCCCCcccHHHHHHHH
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARE-TVF--SVSEIEALYE-LFKKI-----SSAVIDDGLINKEEFQLAL   76 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~i~~l~~-~F~~~-----d~~~~~~g~i~~~ef~~~l   76 (178)
                      ..|+.+|..+..+.++.++.     .++...... .++  +..++..+.. .|..+     +.+  ++|.|+..+|..++
T Consensus        48 ~~l~~~F~~~D~d~dG~I~~-----~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~g~I~~~EF~~~~  120 (219)
T 3cs1_A           48 QRRIELFKKFDKNETGKLCY-----DEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLE--NKGSEDFVEFLEFR  120 (219)
T ss_dssp             HHHHHHHHHHCTTCSSCBCH-----HHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHH--TSCCCSSBCHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcH-----HHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccC--CCCcCCHHHHHHHH
Confidence            44667777787778888877     777765443 333  2334443332 22211     225  78999999998875


Q ss_pred             hcC-CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           77 FKT-NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        77 ~~~-~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ... .......+..+|+.+|.+++|.|+.+||..++..+.....+.+.+..+|+.+|.|++|.|+++||..++...
T Consensus       121 ~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~~  196 (219)
T 3cs1_A          121 LMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAAWASAV  196 (219)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSEEEHHHHHHHHHHH
T ss_pred             HHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            331 112234578999999999999999999999987653211334568999999999999999999999999764

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=99.17  E-value=2.5e-10  Score=74.34  Aligned_cols=82  Identities=16%  Similarity=0.288  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDV  163 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~  163 (178)
                      ...++.+|+.+|  ++|.|+|+||...+...   ....+.++.+|+.||.|++|+|+.+||..++..+. ..|.++++++
T Consensus         8 ~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~-~~g~~~~~~~   81 (109)
T 1rwy_A            8 AEDIKKAIGAFT--AADSFDHKKFFQMVGLK---KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFS-SDARDLSAKE   81 (109)
T ss_dssp             HHHHHHHHHTTC--STTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHC-TTCCCCCHHH
T ss_pred             HHHHHHHHHHcC--CCCcEeHHHHHHHHhcC---cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHh-ccCCCCCHHH
Confidence            455788888888  78999999999987532   34568899999999999999999999999998762 1256789988


Q ss_pred             HHHHHHHH
Q 030405          164 IESIIDKV  171 (178)
Q Consensus       164 ~~~~~~~~  171 (178)
                      ++.++..+
T Consensus        82 ~~~~~~~~   89 (109)
T 1rwy_A           82 TKTLMAAG   89 (109)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            87776655

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=99.14  E-value=1.8e-10  Score=74.95  Aligned_cols=84  Identities=18%  Similarity=0.226  Sum_probs=67.0

Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD  161 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~  161 (178)
                      .....++.+|+.+|  ++|.|+|+||...+...   ....+.++.+|+.||.|++|+|+.+||..++..+. ..|.++++
T Consensus         6 ~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~-~~g~~~~~   79 (108)
T 2pvb_A            6 LKDADVAAALAACS--AADSFKHKEFFAKVGLA---SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFS-PSARALTD   79 (108)
T ss_dssp             SCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTC-TTSCCCCH
T ss_pred             CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhCC---hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHh-ccCCCCCH
Confidence            34566788999988  68899999999987542   34578899999999999999999999999986541 11567999


Q ss_pred             HHHHHHHHHH
Q 030405          162 DVIESIIDKV  171 (178)
Q Consensus       162 ~~~~~~~~~~  171 (178)
                      ++++.++..+
T Consensus        80 ~~~~~~~~~~   89 (108)
T 2pvb_A           80 AETKAFLADG   89 (108)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9888776655

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=99.13  E-value=1.4e-10  Score=75.04  Aligned_cols=63  Identities=21%  Similarity=0.349  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ..++.+|+.+|.+++|.|+.+||..++..+.. ...+++++.+|+.+|.|++|.|+++||..+|
T Consensus        36 ~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~-~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGY-MPNEVELEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             HHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTC-CCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCC-CCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            34688999999999999999999999998876 4667789999999999999999999999876

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=99.13  E-value=2.1e-10  Score=67.97  Aligned_cols=63  Identities=27%  Similarity=0.450  Sum_probs=51.5

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      +..+|+.+|.+++|.|+.+||..++..+.. ..+.+.+..+|+.+|.|++|.|+.+||..++..
T Consensus         3 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            3 AKRVFEKFDKNKDGKLSLDEFREVALAFSP-YFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCT-TSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            467888888888888999988888887654 456677888899999999999999998888743

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=99.11  E-value=1.8e-10  Score=74.92  Aligned_cols=83  Identities=12%  Similarity=0.217  Sum_probs=65.8

Q ss_pred             CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHH
Q 030405           83 ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDD  162 (178)
Q Consensus        83 ~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~  162 (178)
                      ....++.+|+.+|  ++|.|+|+||...+...   ....+.++.+|+.||.|++|+|+.+||..++..+.. .|.+++++
T Consensus         7 t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-~g~~~~~~   80 (108)
T 1rro_A            7 SAEDIAAALQECQ--DPDTFEPQKFFQTSGLS---KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQS-DARELTES   80 (108)
T ss_dssp             CHHHHHHHHHHTC--STTCCCHHHHHHHHSGG---GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCT-TSCCCCHH
T ss_pred             CHHHHHHHHHHcc--CCCCcCHHHHHHHHhcC---cccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhh-ccCCCCHH
Confidence            4556788899988  78999999999987532   345678999999999999999999999999866410 15678998


Q ss_pred             HHHHHHHHH
Q 030405          163 VIESIIDKV  171 (178)
Q Consensus       163 ~~~~~~~~~  171 (178)
                      ++..++..+
T Consensus        81 ~~~~~~~~~   89 (108)
T 1rro_A           81 ETKSLMDAA   89 (108)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            887766654

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=99.10  E-value=2.1e-10  Score=72.69  Aligned_cols=69  Identities=25%  Similarity=0.378  Sum_probs=56.4

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      ++.+++..+...|..+|.+  ++|.|+..+|..++...+ .....++.+|..+|.+++|.|+|+||..++..
T Consensus        21 l~~~~~~~l~~~F~~~D~d--~~G~I~~~El~~~l~~~g-~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~   89 (91)
T 2pmy_A           21 GDGEELARLRSVFAACDAN--RSGRLEREEFRALCTELR-VRPADAEAVFQRLDADRDGAITFQEFARGFLG   89 (91)
T ss_dssp             HHHHHHHHHHHHHHHHCTT--CSSSEEHHHHHHHHHHTT-CCHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCC--CCCCCcHHHHHHHHHHcC-cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence            5677888899999999988  899999999998887655 34556788888888888888888888877654

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=99.09  E-value=6e-10  Score=67.88  Aligned_cols=62  Identities=24%  Similarity=0.413  Sum_probs=29.2

Q ss_pred             HHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           88 DRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        88 ~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ..+|+.+|.+++|.|+.+||..++..+.. ..+.+.+..+|+.+|.+++|.|+.+||..++..
T Consensus        10 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   71 (77)
T 2joj_A           10 KEAFDLFDTNKTGSIDYHELKVAMRALGF-DVKKPEILELMNEYDREGNGYIGFDDFLDIMTE   71 (77)
T ss_dssp             HHHHHHHCCSSSSEEEHHHHHHHHHHHTC-CCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHHhCC-CCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            34444444444444444444444444432 233444445555555555555555555544443

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=99.09  E-value=5.6e-10  Score=72.77  Aligned_cols=82  Identities=17%  Similarity=0.331  Sum_probs=65.8

Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDV  163 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~  163 (178)
                      ...++.+++.+|  ++|.|+|++|...+..   .....+.++.+|+.||.|++|+|+.+||..++..+. ..|.++++++
T Consensus         9 ~~e~~~~~~~~d--~~g~i~~~ef~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~-~~g~~~~~~~   82 (110)
T 1pva_A            9 ADDIKKALDAVK--AEGSFNHKKFFALVGL---KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFA-ADGRDLTDAE   82 (110)
T ss_dssp             HHHHHHHHHHTC--STTCCCHHHHHHHHTC---TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTC-TTCCCCCHHH
T ss_pred             HHHHHHHHHhcC--CCCcCcHHHHHHHHcc---CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh-hcCCCCCHHH
Confidence            455788999988  6889999999998743   145678899999999999999999999999986541 1156789988


Q ss_pred             HHHHHHHH
Q 030405          164 IESIIDKV  171 (178)
Q Consensus       164 ~~~~~~~~  171 (178)
                      ++.++..+
T Consensus        83 ~~~~~~~~   90 (110)
T 1pva_A           83 TKAFLKAA   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            88776655

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.08  E-value=6.1e-11  Score=74.22  Aligned_cols=83  Identities=18%  Similarity=0.315  Sum_probs=65.5

Q ss_pred             CCCcccHHHHHHHHhc-CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeH
Q 030405           63 DDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIER  141 (178)
Q Consensus        63 ~~g~i~~~ef~~~l~~-~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~  141 (178)
                      ++|.|+.++.  ++.. ........+..+|+.+|.+++|.|+.++|..++..+.. ..+.+.+..+|+.+|.+++|.|++
T Consensus         2 ~~G~i~~~e~--~~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~~~~~~~l~~~~d~~~~g~i~~   78 (87)
T 1s6j_A            2 SSGHIDDDDK--HMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGS-ELMESEIKDLMDAADIDKSGTIDY   78 (87)
T ss_dssp             CSSSSSSHHH--HSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTS-SCCHHHHHHHHHHHCTTCSSEECH
T ss_pred             CCCccCccHH--HHHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcCcH
Confidence            6889999982  2322 11112233678999999999999999999999988765 466788999999999999999999


Q ss_pred             HHHHHHH
Q 030405          142 QEVKQMV  148 (178)
Q Consensus       142 ~e~~~~l  148 (178)
                      +||..++
T Consensus        79 ~eF~~~~   85 (87)
T 1s6j_A           79 GEFIAAT   85 (87)
T ss_dssp             HHHTTCC
T ss_pred             HHHHHHH
Confidence            9997653

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=99.08  E-value=1.1e-09  Score=66.73  Aligned_cols=71  Identities=17%  Similarity=0.294  Sum_probs=61.9

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ++++++..+...|..+|.+  ++|.|+..+|..++...+.. ....+..+|..+|.+++|.|+|++|+.++...
T Consensus         1 ls~~~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~   72 (77)
T 2joj_A            1 LSEEQKQEIKEAFDLFDTN--KTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEK   72 (77)
T ss_dssp             CCHHHHHHHHHHHHHHCCS--SSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTHH
T ss_pred             CCHHHHHHHHHHHHHhCCC--CCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            4778899999999999999  99999999999998775443 45668999999999999999999999988643

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=99.05  E-value=1.5e-09  Score=68.37  Aligned_cols=71  Identities=20%  Similarity=0.258  Sum_probs=53.2

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      +++.++..+...|..+|.+  ++|.|+..+|..++...+. .....+..+|..+|.+++|.|+|+||+..+...
T Consensus        14 l~~~~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~   85 (90)
T 1avs_A           14 LSEEMIAEFKAAFDMFDAD--GGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ   85 (90)
T ss_dssp             BCHHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence            6777888888888888888  8888888888887766443 334556778888888878888888887776543

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.05  E-value=7.6e-10  Score=70.33  Aligned_cols=60  Identities=12%  Similarity=0.086  Sum_probs=28.0

Q ss_pred             HHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           88 DRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        88 ~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ..+|+.+|.+++|.|+.+|+..++....   .+.+.+..+|+.+|.|++|.|+++||..++..
T Consensus        12 ~~~F~~~D~d~dG~I~~~el~~~l~~~g---~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~   71 (92)
T 1fi6_A           12 VNQFKTIQPDLNGFIPGSAAKEFFTKSK---LPILELSHIWELSDFDKDGALTLDEFCAAFHL   71 (92)
T ss_dssp             HHHHTTTCCSTTCEEEHHHHHHHHHHHS---SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCcCcHHHHHHHHHHcC---CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            3344444444444444444444444331   22344445555555555555555555555443

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=99.04  E-value=1.3e-09  Score=70.44  Aligned_cols=65  Identities=20%  Similarity=0.309  Sum_probs=38.0

Q ss_pred             HHHHHHHHHHhhc-ccCCCC-CcccHHHHHHHHhc-C-----CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           46 EIEALYELFKKIS-SAVIDD-GLINKEEFQLALFK-T-----NKKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        46 ~i~~l~~~F~~~d-~~~~~~-g~i~~~ef~~~l~~-~-----~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      .+..|.++|+.+| ++  ++ |+|+..||+.++.. .     .......++.+++.+|.|++|.|+|+||+.++.
T Consensus         8 ~i~~l~~aF~~fd~~d--g~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~   80 (101)
T 3nso_A            8 AVAAIVCTFQEYAGRC--GDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLA   80 (101)
T ss_dssp             HHHHHHHHHHHHHTTS--SCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcC--CCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            3556666666665 55  54 66666666666643 1     122344556666666666666666666665554

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=99.04  E-value=7.7e-10  Score=71.64  Aligned_cols=84  Identities=13%  Similarity=0.137  Sum_probs=63.2

Q ss_pred             cccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHH
Q 030405           66 LINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK  145 (178)
Q Consensus        66 ~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~  145 (178)
                      .++..++...+..........+..+|+.+|.+++|.|+..+|..++..+.. ....+.+..+|+.+|.|++|.|+++||.
T Consensus         5 ~~~~~~~~~~l~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~e~~~l~~~~d~~~~g~i~~~eF~   83 (105)
T 1wlz_A            5 ATADRDILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQ-ILTDEQFDRLWNEMPVNAKGRLKYPDFL   83 (105)
T ss_dssp             TTCCHHHHHHHHHHHHHTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTC-CCCHHHHHHHHTTSCBCTTSCBCHHHHH
T ss_pred             chhHHHHHHHHHHHHHchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence            345566655554422223445678899999999999999999998888765 4567788899999999999999999998


Q ss_pred             HHHHH
Q 030405          146 QMVVA  150 (178)
Q Consensus       146 ~~l~~  150 (178)
                      .++..
T Consensus        84 ~~~~~   88 (105)
T 1wlz_A           84 SRFSS   88 (105)
T ss_dssp             HHHC-
T ss_pred             HHHhc
Confidence            88754

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=99.03  E-value=3.2e-10  Score=67.06  Aligned_cols=61  Identities=18%  Similarity=0.311  Sum_probs=50.5

Q ss_pred             HHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           88 DRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        88 ~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      +.+|+.+|.+++|.|+++||..++..+.. ..+.+.+..+|+.+|.|++|.|+.+||..++.
T Consensus         3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~   63 (66)
T 3li6_A            3 EALFKEIDVNGDGAVSYEEVKAFVSKKRA-IKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG   63 (66)
T ss_dssp             CHHHHHHCTTCSSSCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHT
T ss_pred             HHHHHHHCCCCCCcccHHHHHHHHHHccC-CCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            46888999999999999999888876643 34557788899999999999999999988874

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.02  E-value=8.3e-10  Score=70.60  Aligned_cols=63  Identities=14%  Similarity=0.116  Sum_probs=36.7

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      +..+|+.+|.+++|.|+.+|+..++...   +.+.+.+..+|+.+|.|++|.|+++||..++..+.
T Consensus        12 ~~~~F~~~D~d~dG~I~~~el~~~l~~~---g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~   74 (95)
T 1c07_A           12 YDEIFLKTDKDMDGFVSGLEVREIFLKT---GLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLIS   74 (95)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHTT---TCCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcEeHHHHHHHHHHc---CCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHH
Confidence            3455666666666666666665555443   23345566666666666666666666666665543

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=99.02  E-value=1.6e-09  Score=71.48  Aligned_cols=85  Identities=20%  Similarity=0.274  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHhhcc-cCCCCC-cccHHHHHHHHh-cCCC------CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 030405           45 SEIEALYELFKKISS-AVIDDG-LINKEEFQLALF-KTNK------KESLFADRVFDLFDTKHNGILDFEEFARALSIFH  115 (178)
Q Consensus        45 ~~i~~l~~~F~~~d~-~~~~~g-~i~~~ef~~~l~-~~~~------~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~  115 (178)
                      .++..++..|..+|. +  ++| +|+..+|..++. ..+.      .....++.+|+.+|.+++|.|+|+||+.++....
T Consensus         9 ~~~~~l~~~F~~fD~~d--gdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~   86 (113)
T 1xk4_C            9 RNIETIINTFHQYSVKL--GHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT   86 (113)
T ss_dssp             HHHHHHHHHHHHHHTTS--SSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcC--CCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH
Confidence            457789999999994 8  899 999999999987 3331      2456789999999999999999999999886542


Q ss_pred             CCCChhHHHHHHHHhhCCCCCCc
Q 030405          116 PNSPIDDKIEFSFQLYDLKQQGF  138 (178)
Q Consensus       116 ~~~~~~e~~~~~F~~~D~d~~G~  138 (178)
                            ......|...| +++|.
T Consensus        87 ------~~~~~~f~~~~-~~~g~  102 (113)
T 1xk4_C           87 ------WASHEKMHEGD-EGPGH  102 (113)
T ss_dssp             ------HHHHC------------
T ss_pred             ------HHHHHHHhhCC-CCCcc
Confidence                  33556777778 88775

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=99.02  E-value=1.3e-09  Score=95.18  Aligned_cols=128  Identities=13%  Similarity=0.142  Sum_probs=90.3

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhc----------CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHH
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARET----------VFSVSEIEALYELFKKISSAVIDDGLINKEEFQL   74 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~   74 (178)
                      ...++.+|..+. +.++.++.     .++..+....          .++..+++.   .|..+|.+  ++|.|+..+|..
T Consensus       533 ~~~l~~~F~~~D-~~dG~Is~-----~El~~~L~~~~~~~~~~~~~~~s~~~~~~---l~~~~D~d--~~G~I~~~EF~~  601 (900)
T 1qxp_A          533 DDNFKTLFSKLA-GDDMEISV-----KELQTILNRIISKHKDLRTNGFSLESCRS---MVNLMDRD--GNGKLGLVEFNI  601 (900)
T ss_dssp             --------CCCC-CSSSSCCC-----SCTTTTTCC---------CCCCCHHHHHH---HHHHHCC----CCCCCSSSHHH
T ss_pred             HHHHHHHHHHHc-CCCCcCCH-----HHHHHHHHHhhcccccccCCCCCHHHHHH---HHHHhCCC--CCCcCCHHHHHH
Confidence            345667777777 66777766     5555544432          566666544   45566777  899999999988


Q ss_pred             HHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           75 ALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        75 ~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ++...     ..+..+|+.+|.+++|.|+.+||..++..+.. ....+.+..+|+.+| |++|.|+.+||..++..
T Consensus       602 ~~~~~-----~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~-~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~  670 (900)
T 1qxp_A          602 LWNRI-----RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGF-KLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR  670 (900)
T ss_dssp             HHHHH-----HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTE-ECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHH
T ss_pred             HHHHH-----HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCC-CCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence            77543     45688999999999999999999999887754 456678899999999 99999999999988764

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=99.01  E-value=3.6e-09  Score=67.35  Aligned_cols=64  Identities=17%  Similarity=0.260  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ...+..+|+.+|.+++|.|+.+||..++..+.. ....+.++.+|+.+|.|++|.|+++||..++
T Consensus        28 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~-~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~   91 (94)
T 2kz2_A           28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGE-KLTDEEVDEMIREADIDGDGQVNYEEFVQMM   91 (94)
T ss_dssp             HHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTC-CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            445667777777777777777777777766654 3456667777777777777777777777665

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=99.00  E-value=2.3e-09  Score=70.53  Aligned_cols=68  Identities=19%  Similarity=0.254  Sum_probs=39.3

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      +++++.+.+...|..+|.+  ++|+|+..++..++.... .....+..+|+.+|.+++|.|+|+||+.++.
T Consensus         8 ls~~~~~~l~~~F~~~D~d--~dG~I~~~El~~~l~~~~-~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~   75 (111)
T 2kgr_A            8 VPQSSRLKYRQLFNSHDKT--MSGHLTGPQARTILMQSS-LPQAQLASIWNLSDIDQDGKLTAEEFILAMH   75 (111)
T ss_dssp             SCHHHHHHHHHHHHTTSCS--SCCEEEHHHHHHHHHTTC-CCHHHHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHhCC-CCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence            4555666666666666666  666666666666665322 2233455556666666666666666655543

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=99.00  E-value=6.5e-09  Score=89.80  Aligned_cols=114  Identities=13%  Similarity=0.165  Sum_probs=91.6

Q ss_pred             HHHHHHHHh--hcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcC-------CCCcccHHHHHHHHHhhCCCC
Q 030405           48 EALYELFKK--ISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTK-------HNGILDFEEFARALSIFHPNS  118 (178)
Q Consensus        48 ~~l~~~F~~--~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~-------~~g~i~~~ef~~~~~~~~~~~  118 (178)
                      ..+.+.|..  +|.+  ++|.|+..++..++..    ....+..+|..+|.+       ++|.|+|+||..++..+..  
T Consensus       150 ~~L~kaf~~~~~D~n--~dGkIs~kel~~~l~~----~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~--  221 (885)
T 3ohm_B          150 TFLRKAYTKLKLQVN--QDGRIPVKNILKMFSA----DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL--  221 (885)
T ss_dssp             HHHHHHHHHHHHSCC--TTSCEEHHHHHHTTGG----GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC--
T ss_pred             HHHHHHHHHhcCccC--CCCccCHHHHHHHHhc----CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC--
Confidence            456778877  7888  9999999999887754    345678889988876       6789999999999988764  


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcC------CCCCHHHHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG------MNLSDDVIESIIDKV  171 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~------~~l~~~~~~~~~~~~  171 (178)
                        +++++.+|+.||.+++|+|+.+||..+|...-....      +.++.+++.+++++.
T Consensus       222 --R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~  278 (885)
T 3ohm_B          222 --RPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKY  278 (885)
T ss_dssp             --CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHh
Confidence              367999999999999999999999999988622110      147888888887654

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=99.00  E-value=3.3e-09  Score=66.71  Aligned_cols=65  Identities=20%  Similarity=0.356  Sum_probs=58.5

Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .+..+|+.+|.+++|.|+.++|..++..+.. ....+.+..+|+.+|.|++|.|+++||..++...
T Consensus        21 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~   85 (90)
T 1avs_A           21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQ-NPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ   85 (90)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHHHHHHHTTC-CCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence            4678999999999999999999999988765 5667889999999999999999999999998765

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=99.00  E-value=5.4e-10  Score=93.75  Aligned_cols=133  Identities=11%  Similarity=0.063  Sum_probs=63.8

Q ss_pred             ccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHH
Q 030405            7 GLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF   86 (178)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~   86 (178)
                      -++.+|..+..+.++.++.     .++..+....+.... -..+...|..+|.+  ++|.|+.++|..++.....  ...
T Consensus        12 ~l~~~F~~fD~d~dG~Is~-----~El~~~l~~lg~~~s-~~el~~lf~~~D~d--~~G~I~f~EF~~~~~~l~~--~~e   81 (624)
T 1djx_A           12 WIHSCLRKADKNKDNKMNF-----KELKDFLKELNIQVD-DGYARKIFRECDHS--QTDSLEDEEIETFYKMLTQ--RAE   81 (624)
T ss_dssp             ----------------------------------------------------------------CTTHHHHHHTC--CHH
T ss_pred             HHHHHHHHhCCCCCCcCcH-----HHHHHHHHHcCCCCC-HHHHHHHHHHhCCC--CCCeEeHHHHHHHHHHhcc--HHH
Confidence            3567778888788888877     677766665444322 24577778888888  9999999999988765322  345


Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC-ChhHHHHHHHHhhCCC----CCCceeHHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNS-PIDDKIEFSFQLYDLK----QQGFIERQEVKQMVVA  150 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~-~~~e~~~~~F~~~D~d----~~G~I~~~e~~~~l~~  150 (178)
                      +..+|+.+|.+ +|.|+++||..++....... ..++.+..+++.+|.|    ++|.|+.+||..+|..
T Consensus        82 l~~aF~~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s  149 (624)
T 1djx_A           82 IDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS  149 (624)
T ss_dssp             HHHHHHHHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHS
T ss_pred             HHHHHHHhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcC
Confidence            79999999985 89999999999998765433 5678899999999998    7999999999999853

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=98.99  E-value=2.1e-09  Score=65.64  Aligned_cols=62  Identities=27%  Similarity=0.444  Sum_probs=50.0

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ++.+|+.+|.+++|.|+.+||..++..+.  ..+.+.+..+|+.+|.|++|.|+.+||..++..
T Consensus         5 l~~~F~~~D~~~~G~i~~~el~~~l~~~g--~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   66 (78)
T 1k9u_A            5 MERIFKRFDTNGDGKISLSELTDALRTLG--STSADEVQRMMAEIDTDGDGFIDFNEFISFCNA   66 (78)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHHH--TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhC--CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            57788888888888888888888877765  345677888888888888888888888888754

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=98.99  E-value=4.4e-09  Score=66.32  Aligned_cols=66  Identities=20%  Similarity=0.332  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ..+..+|+.+|.+++|.|+.++|..++..+.. ....+.+..+|+.+|.|++|.|+++||..++...
T Consensus         9 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~   74 (92)
T 2kn2_A            9 EELKEAFKVFDKDQNGYISASELRHVMINLGE-KLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV   74 (92)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC-CCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence            34688999999999999999999999988765 4677889999999999999999999999999776

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=98.98  E-value=3.6e-09  Score=67.41  Aligned_cols=68  Identities=19%  Similarity=0.332  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHHhhc-ccCCC-CCcccHHHHHHHHhc-CC-----CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           45 SEIEALYELFKKIS-SAVID-DGLINKEEFQLALFK-TN-----KKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        45 ~~i~~l~~~F~~~d-~~~~~-~g~i~~~ef~~~l~~-~~-----~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      +.+..++++|+.+| ++  + +|+|+..+|+.++.. .+     ......++.+++.+|.|++|.|+|+||+.++..+
T Consensus         7 ~~~~~l~~~F~~fd~~d--g~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~   82 (93)
T 4eto_A            7 KALDVMVSTFHKYSGKE--GDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   82 (93)
T ss_dssp             HHHHHHHHHHHHHHTSS--SSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccC--CCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            45677888888886 45  5 378888888887754 22     1235567788888888888888888887776544

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=98.98  E-value=2.5e-09  Score=68.15  Aligned_cols=65  Identities=20%  Similarity=0.335  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           46 EIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      ..+.+...|..+|.+  ++|.|+..+|..++...+ ......++.+|+.+|.+++|.|+|+||+.++.
T Consensus        27 ~~~~l~~~F~~~D~d--~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~   92 (94)
T 2kz2_A           27 SEEEIREAFRVEDKD--GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT   92 (94)
T ss_dssp             CHHHHHHHHHHHCTT--CCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCC--CcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            346788999999999  999999999999987744 34566789999999999999999999998774

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=98.98  E-value=3.4e-09  Score=65.99  Aligned_cols=65  Identities=26%  Similarity=0.366  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ..+..+|+.+|.+++|.|+.+||..++..+.  ..+.+.+..+|+.+|.|++|.|+.+||..++...
T Consensus        11 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g--~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   75 (86)
T 2opo_A           11 ADRERIFKRFDTNGDGKISSSELGDALKTLG--SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   75 (86)
T ss_dssp             HHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT--TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC--CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence            3468899999999999999999999998876  4567889999999999999999999999998653

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=98.97  E-value=3.5e-09  Score=67.62  Aligned_cols=70  Identities=29%  Similarity=0.384  Sum_probs=61.9

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ++.++++.+...|..+|.+  ++|+|+..++..++...+. ....++.+++.+|.+++|.|+|+||+.++...
T Consensus         4 ls~~~~~~~~~~F~~~D~d--~dG~I~~~el~~~l~~~g~-~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~   73 (95)
T 1c07_A            4 VSPAEKAKYDEIFLKTDKD--MDGFVSGLEVREIFLKTGL-PSTLLAHIWSLCDTKDCGKLSKDQFALAFHLI   73 (95)
T ss_dssp             SCSHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHTTTC-CHHHHHHHHHHHCTTCSSSEETTTHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCC--CCCcEeHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence            5778899999999999999  9999999999999987654 35668999999999999999999999887643

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=98.97  E-value=2.4e-09  Score=69.00  Aligned_cols=73  Identities=15%  Similarity=0.140  Sum_probs=56.9

Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh-hcCCCCCH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT-ESGMNLSD  161 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~-~~~~~l~~  161 (178)
                      .+..+|+.+|.+++|.|+.+|+..++...   +.+.+.+..+|+.+|.|++|.|+++||..++..+.. ..|.+++.
T Consensus        12 ~~~~~F~~~D~d~dG~Is~~el~~~l~~~---~l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~~~~~~g~~~~~   85 (99)
T 1qjt_A           12 VYEKYYRQVEAGNTGRVLALDAAAFLKKS---GLPDLILGKIWDLADTDGKGVLSKQEFFVALRLVACAQNGLEVSL   85 (99)
T ss_dssp             HHHHHHHHHCCTTSSCCCSHHHHHHHHTS---SSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHHHHTTTCCSSG
T ss_pred             HHHHHHHHHCCCCCCcCCHHHHHHHHHHc---CCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHcCCCCCh
Confidence            35788999999989999999988888765   345778888999999999999999999988876633 33555553

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=98.96  E-value=5.4e-09  Score=67.94  Aligned_cols=68  Identities=21%  Similarity=0.349  Sum_probs=48.4

Q ss_pred             HHHHHHHHHHHhhc-ccCCCC-CcccHHHHHHHHhc-CC-----CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           45 SEIEALYELFKKIS-SAVIDD-GLINKEEFQLALFK-TN-----KKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        45 ~~i~~l~~~F~~~d-~~~~~~-g~i~~~ef~~~l~~-~~-----~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ..+..|..+|..+| .+  ++ |+|+..||..++.. .+     ......++.+++.+|.|++|.|+|+||+.++..+
T Consensus        10 ~~~~~l~~aF~~fD~~d--gd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~   85 (104)
T 3zwh_A           10 KALDVMVSTFHKYSGKE--GDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI   85 (104)
T ss_dssp             HHHHHHHHHHHHHHTSS--SSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccC--CCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            45677888888876 45  53 68888888887764 22     1235567888888888888888888888777544

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=98.96  E-value=1.3e-09  Score=65.20  Aligned_cols=63  Identities=19%  Similarity=0.315  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ..+..+|+.+|.+++|.|+.++|..++..+.. ..+.+.+..+|+.+|.+++|.|+.+||..++
T Consensus         6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~   68 (71)
T 2b1u_A            6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQ-PLPQEELDAMIREADVDQDGRVNYEEFARML   68 (71)
T ss_dssp             HHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTC-SSCHHHHHHHHHHCCSSSSSEEETTHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            34567777788887888888888777766654 3456677778888888888888888887765

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=98.95  E-value=2.5e-09  Score=64.84  Aligned_cols=66  Identities=15%  Similarity=0.160  Sum_probs=48.5

Q ss_pred             HHHHHHHHHH-hcCCC-CcccHHHHHHHHHhhCCCCC--hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           85 LFADRVFDLF-DTKHN-GILDFEEFARALSIFHPNSP--IDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        85 ~~~~~lf~~~-d~~~~-g~i~~~ef~~~~~~~~~~~~--~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ..+..+|+.+ |.+++ |.|+..||..++..+.. ..  +.+.+..+|+.+|.|++|.|+++||..++..+
T Consensus         5 ~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~-~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~   74 (76)
T 1qx2_A            5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGP-SLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGG-GSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCC-CcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            3456778888 88877 88888888777776643 23  45567788888888888888888888877654

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=98.95  E-value=2e-09  Score=66.51  Aligned_cols=66  Identities=17%  Similarity=0.231  Sum_probs=52.3

Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhC--CCCChhHHHHH----HHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFH--PNSPIDDKIEF----SFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~--~~~~~~e~~~~----~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      .+..+|+.+|.+++|.|+.+||..++..+.  . ..+.+.+..    +|+.+|.|++|.|+.+||...+..++
T Consensus         8 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~~~   79 (83)
T 1yx7_A            8 ELEAAFKKLDANGDGYVTALELQTFMVTLDAYK-ALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAELL   79 (83)
T ss_dssp             HHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCT-TTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccc-CCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHHHH
Confidence            457888888888888888888888887765  3 344556666    89999999999999999988776654

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=98.94  E-value=2.7e-09  Score=66.45  Aligned_cols=69  Identities=10%  Similarity=-0.014  Sum_probs=45.5

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHH---HHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLF---ADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~---~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      ++++++..+...|..+|.+  ++|.|+..+|..++...+.. ....   +..+|..+|.+++|.|+| +|+.++..
T Consensus         8 l~~~~~~~l~~~F~~~D~d--~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~   80 (86)
T 1j7q_A            8 LGPEEKDECMKIFDIFDRN--AENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK   80 (86)
T ss_dssp             CSSTHHHHHHHHHHHHSTT--TTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCC--CCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence            5566667777777777777  77777777777776554322 3344   566677777777777777 77666554

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=98.94  E-value=1.8e-09  Score=72.01  Aligned_cols=89  Identities=13%  Similarity=0.155  Sum_probs=65.6

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHh-----hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhc----CC
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSI-----FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTES----GM  157 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~-----~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~----~~  157 (178)
                      +..+|+.||.+ +|.|+..|+..++..     +.. ...++.+..+++.+|.|++|.|+++||..++..++.+.    ..
T Consensus        17 l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~-~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~~~he~f~~   94 (121)
T 4drw_A           17 MMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLEN-QKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIACNDYFVV   94 (121)
T ss_dssp             HHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTT-SSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhccc-CCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHHHHHHH
Confidence            46778889987 799999999998865     343 45678899999999999999999999999999875431    11


Q ss_pred             CCCHH----HHHHHHHHHHhhccC
Q 030405          158 NLSDD----VIESIIDKVLSLIQL  177 (178)
Q Consensus       158 ~l~~~----~~~~~~~~~~~~~D~  177 (178)
                      +..++    .-+..+.++|+++|+
T Consensus        95 ~~k~~~~~~~~d~~~~e~~~~~d~  118 (121)
T 4drw_A           95 HMKQENLYFQGDSTVHEILSKLSL  118 (121)
T ss_dssp             SCC---------CCHHHHHHHCCC
T ss_pred             HHHHhccCCCCchHHHHHHHHhcc
Confidence            22222    223457778877774

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=98.94  E-value=5.8e-09  Score=66.16  Aligned_cols=70  Identities=20%  Similarity=0.306  Sum_probs=62.0

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ++++++..+...|..+|++  ++|+|+..++..++...+. ....+..+++.+|.+++|.|+|+||+.++...
T Consensus         3 ls~~~~~~~~~~F~~~D~d--~dG~I~~~el~~~l~~~g~-~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~   72 (92)
T 1fi6_A            3 ITDEQRQYYVNQFKTIQPD--LNGFIPGSAAKEFFTKSKL-PILELSHIWELSDFDKDGALTLDEFCAAFHLV   72 (92)
T ss_dssp             CCHHHHHHHHHHHTTTCCS--TTCEEEHHHHHHHHHHHSS-CHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence            6788999999999999999  9999999999999877654 35668999999999999999999999987644

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=98.92  E-value=1.2e-08  Score=76.55  Aligned_cols=94  Identities=15%  Similarity=0.115  Sum_probs=75.8

Q ss_pred             HHHHHhhcccCCCCCcccHHHHHHHHhc-CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh-------C-----CC
Q 030405           51 YELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF-------H-----PN  117 (178)
Q Consensus        51 ~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~-------~-----~~  117 (178)
                      .-.|+.+|.+  ++|.|+..+|+.+|.. .....++.++.+|+.+| |++|.|+.+|+..++..+       .     ..
T Consensus       135 ~~lf~~FD~~--~~G~I~f~ef~~aLs~l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~  211 (261)
T 1eg3_A          135 NWLLNVYDTG--RTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGG  211 (261)
T ss_dssp             HHHHHHHCTT--CCSEEEHHHHHHHHHHTSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTC
T ss_pred             HHHHHHccCC--CCceEeHHHHHHHHHHHcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence            3477888999  9999999999998866 33445567899999999 999999999998877542       1     11


Q ss_pred             CChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405          118 SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus       118 ~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      ...++.++..|+.+|  ++|.|+.+||...++
T Consensus       212 ~~~e~~v~~~F~~~d--~dg~It~~EFl~~~~  241 (261)
T 1eg3_A          212 SNIEPSVRSCFQFAN--NKPEIEAALFLDWMR  241 (261)
T ss_dssp             SCCHHHHHHHHHHTT--TCSCBCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCC--CCCcCCHHHHHHHHH
Confidence            245677899999996  889999999999874

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=98.92  E-value=2.3e-09  Score=65.95  Aligned_cols=63  Identities=22%  Similarity=0.412  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhC-CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFH-PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~-~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      ..+. +|+.+|.+++|.|+.+||..++..+. . ....+.+..+|+.+|.+++|.|+++||..++.
T Consensus         9 ~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~   72 (81)
T 1c7v_A            9 EILR-AFKVFDANGDGVIDFDEFKFIMQKVGEE-PLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK   72 (81)
T ss_dssp             HHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTC-CCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred             HHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            4456 78888888888888888877776664 3 45567777888888888888888888877764

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=98.91  E-value=4.5e-09  Score=66.43  Aligned_cols=63  Identities=25%  Similarity=0.276  Sum_probs=56.0

Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .+..+|+.+|.+++|.|+.+||..++..+.   ...+.+..+|+.+|.|++|.|+.+||..++..+
T Consensus        28 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~~   90 (91)
T 2pmy_A           28 RLRSVFAACDANRSGRLEREEFRALCTELR---VRPADAEAVFQRLDADRDGAITFQEFARGFLGS   90 (91)
T ss_dssp             HHHHHHHHHCTTCSSSEEHHHHHHHHHHTT---CCHHHHHHHHHHHCTTCSSEECHHHHTHHHHHT
T ss_pred             HHHHHHHHHCCCCCCCCcHHHHHHHHHHcC---cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence            367899999999999999999999998764   456789999999999999999999999988653

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=98.91  E-value=1.1e-09  Score=71.97  Aligned_cols=68  Identities=16%  Similarity=0.232  Sum_probs=39.2

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      ++.++...+++.|..+|++  ++|+|+..+++.++...+.. ...++.+++.+|.+++|.|+|+||+.++.
T Consensus        16 ls~~~~~~~~~~F~~~D~d--~dG~Is~~el~~~l~~~gl~-~~el~~i~~~~D~d~dG~I~~~EF~~~m~   83 (110)
T 1iq3_A           16 ITEEQREYYVNQFRSLQPD--PSSFISGSVAKNFFTKSKLS-IPELSYIWELSDADCDGALTLPEFCAAFH   83 (110)
T ss_dssp             CSSSSHHHHHHHHHHHCCS--SSSEEEHHHHHHHCCSSSCS-SCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCC--CCCeEcHHHHHHHHHHcCCC-HHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence            4445556666666666666  66666666666665443322 22345566666666666666666655543

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=98.90  E-value=1.2e-08  Score=64.66  Aligned_cols=64  Identities=27%  Similarity=0.476  Sum_probs=29.8

Q ss_pred             HHHHHHHHHHhhcccCCCCC---cccHHHHHHHHhc-----CC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           46 EIEALYELFKKISSAVIDDG---LINKEEFQLALFK-----TN-KKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~~~g---~i~~~ef~~~l~~-----~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      .+..++..|..+| +  ++|   +|+..+|..++..     .+ ......++.+++.+|.+++|.|+|+||+.++.
T Consensus         7 ~~~~l~~~F~~~D-~--~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~   79 (92)
T 3rm1_A            7 AVVALIDVFHQYS-G--REGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVA   79 (92)
T ss_dssp             HHHHHHHHHHHHH-T--SSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHc-c--CCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHH
Confidence            3445555555555 3  233   5555555555543     11 11233344455555555555555555544443

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=98.90  E-value=7.6e-09  Score=66.87  Aligned_cols=69  Identities=10%  Similarity=-0.010  Sum_probs=57.6

Q ss_pred             HHHHHHHHHh-cCCC-CcccHHHHHHHHHh-hC---CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhh
Q 030405           86 FADRVFDLFD-TKHN-GILDFEEFARALSI-FH---PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE  154 (178)
Q Consensus        86 ~~~~lf~~~d-~~~~-g~i~~~ef~~~~~~-~~---~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~  154 (178)
                      .+..+|+.|| .+++ |.|+.+|+..++.. +.   .....++.+..+++.+|.|++|.|+++||..++..+..+
T Consensus        11 ~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~~~~   85 (101)
T 3nso_A           11 AIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLCLY   85 (101)
T ss_dssp             HHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHH
Confidence            3578999998 7776 99999999999985 31   224567889999999999999999999999999877543

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=98.89  E-value=6.7e-09  Score=61.27  Aligned_cols=63  Identities=21%  Similarity=0.327  Sum_probs=54.3

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      .+...|..+|.+  ++|.|+..+|..++...+. .....+..+|+.+|.+++|.|+|+||...+..
T Consensus         2 ~l~~~F~~~D~d--~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            2 SAKRVFEKFDKN--KDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             THHHHHHHHCTT--SSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHHCCC--CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            467889999999  9999999999999877443 34566899999999999999999999998754

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=98.89  E-value=1.3e-08  Score=64.50  Aligned_cols=67  Identities=16%  Similarity=0.177  Sum_probs=56.8

Q ss_pred             HHHHHHHHHhcCCCC---cccHHHHHHHHHh-----hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhh
Q 030405           86 FADRVFDLFDTKHNG---ILDFEEFARALSI-----FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE  154 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g---~i~~~ef~~~~~~-----~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~  154 (178)
                      .+..+|+.+| +++|   .|+.+|+..++..     +.. ...++.+..+|+.+|.|++|.|+++||..++..+..+
T Consensus        10 ~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~-~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l~~~   84 (92)
T 3rm1_A           10 ALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEE-IKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMITTA   84 (92)
T ss_dssp             HHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCC-CCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccC-cccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHHH
Confidence            3578999999 6665   9999999999987     544 4567889999999999999999999999999887443

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=98.89  E-value=2.4e-10  Score=74.33  Aligned_cols=82  Identities=13%  Similarity=0.150  Sum_probs=63.0

Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD  161 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~  161 (178)
                      .....++.+|+.+|  ++|.|+|+||...+...   ....+.++.+|+.||.|++|+|+.+||..++..+. ..|.++++
T Consensus         6 ~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~-~~g~~~~~   79 (108)
T 2kyc_A            6 LSPSDIAAALRDCQ--APDSFSPKKFFQISGMS---KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFE-SGARVLTA   79 (108)
T ss_dssp             SCHHHHHHHHTTSC--STTTCCHHHHHHHHTCT---TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHS-SSCCCCCT
T ss_pred             CCHHHHHHHHHHcC--CCCcCCHHHHHHHHhhC---cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHh-hccCCCCH
Confidence            34556778888887  78999999999988432   34557799999999999999999999999998762 12556777


Q ss_pred             HHHHHHHH
Q 030405          162 DVIESIID  169 (178)
Q Consensus       162 ~~~~~~~~  169 (178)
                      ++++.++.
T Consensus        80 ~~~~~~~~   87 (108)
T 2kyc_A           80 SETKTFLA   87 (108)
T ss_dssp             TTTHHHHT
T ss_pred             HHHHHHHH
Confidence            77664443

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=98.89  E-value=5.9e-09  Score=66.14  Aligned_cols=65  Identities=17%  Similarity=0.301  Sum_probs=36.3

Q ss_pred             HHHHHHHHHHhhc-ccCCCCC-cccHHHHHHHHhc-CC--CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           46 EIEALYELFKKIS-SAVIDDG-LINKEEFQLALFK-TN--KKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        46 ~i~~l~~~F~~~d-~~~~~~g-~i~~~ef~~~l~~-~~--~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      ++..++..|..+| ++  ++| .|+..+|..++.. .+  ......++.+++.+|.+++|.|+|+||+.++.
T Consensus         8 ~~~~l~~~F~~~D~~d--~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~   77 (92)
T 2kax_A            8 ALTTMVTTFHKYSGRE--GSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLT   77 (92)
T ss_dssp             HHHHHHHHHHHHHTTS--SCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhC--CCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            3455666666666 66  666 6666666666543 11  12223355666666666666666666665554

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=98.89  E-value=9.7e-09  Score=63.91  Aligned_cols=66  Identities=12%  Similarity=0.065  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHH---HHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDK---IEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~---~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      ..+..+|..+|.+++|.|+..+|..++..+.. ....+.   +..+|+.+|.+++|.|+. ||..++...+
T Consensus        14 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~~~   82 (86)
T 1j7q_A           14 DECMKIFDIFDRNAENIAPVSDTMDMLTKLGQ-TYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSKWV   82 (86)
T ss_dssp             HHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSC-CCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHHHH
Confidence            34678999999999999999999999998876 456677   999999999999999999 9999987653

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=98.88  E-value=2.7e-09  Score=65.16  Aligned_cols=64  Identities=25%  Similarity=0.364  Sum_probs=55.3

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ++...|..+|.+  ++|.|+..+|..++...+......+..+|..+|.+++|.|+|+||...+...
T Consensus         4 ~l~~~F~~~D~~--~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~   67 (78)
T 1k9u_A            4 DMERIFKRFDTN--GDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN   67 (78)
T ss_dssp             HHHHHHHHHCTT--CSSEECHHHHHHHHHHHHTCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred             HHHHHHHHHCCC--CCCcCcHHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence            578889999999  9999999999999876444456678999999999999999999999988653

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=98.88  E-value=1.4e-08  Score=65.31  Aligned_cols=66  Identities=23%  Similarity=0.440  Sum_probs=40.2

Q ss_pred             HHHHHHHHHHhhc-ccCCCCC-cccHHHHHHHHhc-----CC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           46 EIEALYELFKKIS-SAVIDDG-LINKEEFQLALFK-----TN-KKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        46 ~i~~l~~~F~~~d-~~~~~~g-~i~~~ef~~~l~~-----~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      ++..++.+|..+| .+  ++| +|+..+|..++..     .+ ......++.+++.+|.+++|.|+|+||+.++..
T Consensus         8 ~~~~l~~~F~~fDd~d--g~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~   81 (99)
T 2y5i_A            8 AMDALITVFHNYSGSE--GDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA   81 (99)
T ss_dssp             HHHHHHHHHHHHHTSS--SSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccC--CCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            4556666777665 55  555 7777777766643     11 123445666666777666677777777666543

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=98.87  E-value=1.3e-08  Score=66.43  Aligned_cols=60  Identities=22%  Similarity=0.325  Sum_probs=32.0

Q ss_pred             HHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           88 DRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        88 ~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ..+|+.+|. ++|.|+.+|+..++...   +.+.+.+..+|+..|.|++|.|+++||..++..+
T Consensus        18 ~~~F~~~D~-~dG~Is~~el~~~l~~~---gl~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~   77 (106)
T 1eh2_A           18 DAIFDSLSP-VNGFLSGDKVKPVLLNS---KLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV   77 (106)
T ss_dssp             HHHHTTSCC-SSSCCBHHHHHHHHHTT---TCCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCeEcHHHHHHHHHHc---CCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            445555555 55555555555555443   2334455555555555555555555555555543

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=98.86  E-value=1.4e-08  Score=66.75  Aligned_cols=65  Identities=17%  Similarity=0.137  Sum_probs=56.8

Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT  153 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~  153 (178)
                      .+..+|+.+|.+++|.|+.+|+..++..  . ....+.+..+|+.+|.|++|.|+++||..++..+..
T Consensus        15 ~l~~~F~~~D~d~dG~I~~~El~~~l~~--~-~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~~~   79 (111)
T 2kgr_A           15 KYRQLFNSHDKTMSGHLTGPQARTILMQ--S-SLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDV   79 (111)
T ss_dssp             HHHHHHHTTSCSSCCEEEHHHHHHHHHT--T-CCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHh--C-CCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHH
Confidence            3578999999999999999999999873  2 456788999999999999999999999999987643

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=98.85  E-value=1e-08  Score=65.50  Aligned_cols=66  Identities=20%  Similarity=0.350  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHhhc-ccCCC-CCcccHHHHHHHHhc-C----C-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           46 EIEALYELFKKIS-SAVID-DGLINKEEFQLALFK-T----N-KKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        46 ~i~~l~~~F~~~d-~~~~~-~g~i~~~ef~~~l~~-~----~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      ++..++.+|..+| .+  + +|+|+..+|..++.. .    + ......++.+++.+|.+++|.|+|+||+.++..
T Consensus         7 ~~~~l~~~F~~fD~~d--gd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~   80 (95)
T 1j55_A            7 AMGMIIDVFSRYSGSE--GSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA   80 (95)
T ss_dssp             HHHHHHHHHHHHTTSS--SCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccC--CCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            4566777777777 45  5 367777777776643 1    1 112234566677777777777777777666543

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=98.85  E-value=1.5e-08  Score=63.94  Aligned_cols=64  Identities=19%  Similarity=0.178  Sum_probs=39.4

Q ss_pred             HHHHHHHHh-cCCCC-cccHHHHHHHHHh-----hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           87 ADRVFDLFD-TKHNG-ILDFEEFARALSI-----FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        87 ~~~lf~~~d-~~~~g-~i~~~ef~~~~~~-----~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      +..+|+.+| .+++| .|+..||..++..     +.. ..+.+.+..+|+.+|.|++|.|+++||..++..+
T Consensus        11 l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~-~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~   81 (93)
T 1k2h_A           11 LINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDV-QKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (93)
T ss_dssp             HHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHC-CCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            455666666 46666 6666666666554     332 3345566666777777777777777776666654

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=98.85  E-value=8e-09  Score=62.87  Aligned_cols=66  Identities=17%  Similarity=0.196  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHhc-CCCC-cccHHHHHHHHHh-hCCCCC-hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           85 LFADRVFDLFDT-KHNG-ILDFEEFARALSI-FHPNSP-IDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        85 ~~~~~lf~~~d~-~~~g-~i~~~ef~~~~~~-~~~~~~-~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ..+..+|..+|. +++| .|+.+||..++.. +.. .. ..+.++.+|+.+|.|++|.|+.+||..++..+
T Consensus         7 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~-~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   76 (78)
T 1cb1_A            7 AELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPS-LLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             HHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSS-CCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhh-hcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHh
Confidence            345677888887 7777 7888888777764 332 22 44567778888888888888888888777654

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=98.84  E-value=2.2e-08  Score=64.54  Aligned_cols=69  Identities=26%  Similarity=0.328  Sum_probs=37.5

Q ss_pred             HHHHHHHHHHhhcccCC-CCCcccHHHHHHHHhc-CC--CC---CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           46 EIEALYELFKKISSAVI-DDGLINKEEFQLALFK-TN--KK---ESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~-~~g~i~~~ef~~~l~~-~~--~~---~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      .+..|+.+|..+|.+.+ ++|+|+..+|+.++.. .+  ..   ....++.+++.+|.+++|.|+|+||+.++..+
T Consensus         9 ~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~   84 (100)
T 3nxa_A            9 AVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGI   84 (100)
T ss_dssp             HHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            45566666666665411 1466666666666543 11  11   12345666666666666666666666655543

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=98.84  E-value=2e-08  Score=66.15  Aligned_cols=68  Identities=21%  Similarity=0.365  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHHHhhc-ccCCCCC-cccHHHHHHHHhc-----CC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           44 VSEIEALYELFKKIS-SAVIDDG-LINKEEFQLALFK-----TN-KKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        44 ~~~i~~l~~~F~~~d-~~~~~~g-~i~~~ef~~~l~~-----~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      ..++..++.+|..+| .+  ++| +|+..+|..++..     .+ ......++.+++.+|.+++|.|+|+||+.++..
T Consensus        18 ~~~~~~l~~aF~~fD~~d--gdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~   93 (113)
T 2lnk_A           18 EKALDVMVSTFHKYSGKE--GDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   93 (113)
T ss_dssp             HHHHHHHHHHHHHTTTTT--SCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHcccC--CCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            345667777777777 66  665 7777777777643     11 122345677777777777777777777766643

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=98.83  E-value=9.4e-09  Score=67.49  Aligned_cols=66  Identities=8%  Similarity=0.038  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      ...+..+|+.+|.+++|.|+.+|+..++...   +.+.+.+..+|+.+|.|++|.|+++||..++..+.
T Consensus        21 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~---gl~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~~   86 (110)
T 1iq3_A           21 REYYVNQFRSLQPDPSSFISGSVAKNFFTKS---KLSIPELSYIWELSDADCDGALTLPEFCAAFHLIV   86 (110)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHCCSS---SCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHc---CCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence            4457889999999999999999999988654   34556789999999999999999999999988663

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=98.83  E-value=2.3e-08  Score=65.89  Aligned_cols=65  Identities=11%  Similarity=0.100  Sum_probs=55.4

Q ss_pred             HHHHHHHHHh-cCCCC-cccHHHHHHHHHh-----hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           86 FADRVFDLFD-TKHNG-ILDFEEFARALSI-----FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        86 ~~~~lf~~~d-~~~~g-~i~~~ef~~~~~~-----~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .+..+|+.|| .+++| .|+.+||..++..     +.. ..+++.+..+++.+|.|++|.|+++||..++...
T Consensus        23 ~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~-~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~   94 (113)
T 2lnk_A           23 VMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGK-RTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   94 (113)
T ss_dssp             HHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTT-CCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCC-CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence            3678999999 78887 9999999999975     332 3456789999999999999999999999998765

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=98.83  E-value=3.3e-08  Score=63.74  Aligned_cols=69  Identities=13%  Similarity=0.025  Sum_probs=56.4

Q ss_pred             HHHHHHHHHhcCC---CCcccHHHHHHHHHhhCCCC----ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhh
Q 030405           86 FADRVFDLFDTKH---NGILDFEEFARALSIFHPNS----PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE  154 (178)
Q Consensus        86 ~~~~lf~~~d~~~---~g~i~~~ef~~~~~~~~~~~----~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~  154 (178)
                      .+..+|+.||.++   +|.|+.+|+..++.......    ...+.+..+++.+|.|++|.|+++||..++..+..+
T Consensus        12 ~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~~~   87 (100)
T 3nxa_A           12 VLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGITGP   87 (100)
T ss_dssp             HHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHH
Confidence            3578999999863   79999999999998654211    225779999999999999999999999999887443

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=98.83  E-value=3.2e-08  Score=64.27  Aligned_cols=67  Identities=10%  Similarity=0.074  Sum_probs=55.2

Q ss_pred             HHHHHHHHHh-cCCC-CcccHHHHHHHHHh-hC---CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           86 FADRVFDLFD-TKHN-GILDFEEFARALSI-FH---PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        86 ~~~~lf~~~d-~~~~-g~i~~~ef~~~~~~-~~---~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      .+..+|+.|| .+++ |.|+.+||..++.. +.   .....++.+..+++.+|.|++|.|+++||..++..++
T Consensus        14 ~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~~   86 (104)
T 3zwh_A           14 VMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSIA   86 (104)
T ss_dssp             HHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            3578899998 5664 79999999999985 32   1134578899999999999999999999999998764

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=98.83  E-value=5e-09  Score=67.49  Aligned_cols=65  Identities=22%  Similarity=0.346  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           46 EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      +...++..|..+|++  ++|+|+..++..++...+. ....+..+|+.+|.+++|.|+|+||..++..
T Consensus         9 ~~~~~~~~F~~~D~d--~dG~Is~~el~~~l~~~~l-~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~   73 (99)
T 1qjt_A            9 GNPVYEKYYRQVEAG--NTGRVLALDAAAFLKKSGL-PDLILGKIWDLADTDGKGVLSKQEFFVALRL   73 (99)
T ss_dssp             TCTHHHHHHHHHCCT--TSSCCCSHHHHHHHHTSSS-CHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred             hHHHHHHHHHHHCCC--CCCcCCHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence            346789999999999  9999999999999987654 4667899999999999999999999998764

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=98.82  E-value=1.1e-08  Score=66.76  Aligned_cols=67  Identities=18%  Similarity=0.257  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHhhc-ccCCCC-CcccHHHHHHHHhc-CC--CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           46 EIEALYELFKKIS-SAVIDD-GLINKEEFQLALFK-TN--KKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        46 ~i~~l~~~F~~~d-~~~~~~-g~i~~~ef~~~l~~-~~--~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ++..++.+|..+| .+  ++ |+|+..+|..++.. .+  ......++.+++.+|.+++|.|+|+||+.++...
T Consensus        20 ~~~~l~~aF~~fD~~d--g~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~   91 (106)
T 2h2k_A           20 SIETVVTTFFTFARQE--GRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL   91 (106)
T ss_dssp             HHHHHHHHHHHHHTSS--SSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccC--CCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            4667888888888 56  65 68888888887754 22  1112346778888888888888888887776543

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=98.82  E-value=4.2e-08  Score=63.09  Aligned_cols=65  Identities=15%  Similarity=0.103  Sum_probs=55.3

Q ss_pred             HHHHHHHHHh-cCCCC-cccHHHHHHHHHh-----hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           86 FADRVFDLFD-TKHNG-ILDFEEFARALSI-----FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        86 ~~~~lf~~~d-~~~~g-~i~~~ef~~~~~~-----~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .+..+|+.+| .+++| .|+.+||..++..     +.. ....+.+..+++.+|.|++|.|+++||..++...
T Consensus        11 ~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~-~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   82 (99)
T 2y5i_A           11 ALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMS-QKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (99)
T ss_dssp             HHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTT-SCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccc-cccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            3678999997 78887 9999999999875     322 3456789999999999999999999999998765

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=98.82  E-value=1e-08  Score=65.45  Aligned_cols=65  Identities=23%  Similarity=0.414  Sum_probs=40.1

Q ss_pred             HHHHHHHHHHhhc-ccCCCCC-cccHHHHHHHHhc-C----C-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           46 EIEALYELFKKIS-SAVIDDG-LINKEEFQLALFK-T----N-KKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        46 ~i~~l~~~F~~~d-~~~~~~g-~i~~~ef~~~l~~-~----~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      ++..++.+|..+| ++  ++| +|+..+|..++.. .    + ......++.+++.+|.+++|.|+|+||+.++.
T Consensus        10 ~~~~l~~~F~~fD~~d--g~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~   82 (95)
T 2wcb_A           10 HLEGIVNIFHQYSVRK--GHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVA   82 (95)
T ss_dssp             HHHHHHHHHHHHHTSS--SSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccC--CCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence            4566777777776 56  665 7777777776643 1    1 12334456666666666666666666666554

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=98.81  E-value=3.3e-08  Score=62.85  Aligned_cols=67  Identities=10%  Similarity=0.071  Sum_probs=54.3

Q ss_pred             HHHHHHHHHh-cCCC-CcccHHHHHHHHHh-hC---CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           86 FADRVFDLFD-TKHN-GILDFEEFARALSI-FH---PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        86 ~~~~lf~~~d-~~~~-g~i~~~ef~~~~~~-~~---~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      .+..+|+.+| .+++ |.|+.+|+..++.. +.   .....++.+..+++.+|.|++|.|+++||..++..+.
T Consensus        11 ~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~~   83 (93)
T 4eto_A           11 VMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIA   83 (93)
T ss_dssp             HHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence            3578999998 5664 89999999999975 32   1133577899999999999999999999999998763

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=98.81  E-value=1.5e-08  Score=65.79  Aligned_cols=61  Identities=13%  Similarity=0.101  Sum_probs=36.3

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      +..+|..+|.+++|.|+.++|..++..+.. ..+.+.+..+|+.+|.|++|.|+++||..++
T Consensus        34 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~   94 (107)
T 2d58_A           34 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGV-PKTHLELKKLIGEVSSGSGETFSYPDFLRMM   94 (107)
T ss_dssp             HHHHHTTSCCCTTSCEEHHHHHHHHHHTTC-CCCHHHHHHHHHHHCSSSSSEECHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence            345566666666666666666666655543 3445556666666666666666666666554

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=98.81  E-value=2.5e-08  Score=63.20  Aligned_cols=67  Identities=10%  Similarity=0.045  Sum_probs=56.2

Q ss_pred             HHHHHHHHHh-cCCCC-cccHHHHHHHHHhhCC-CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           86 FADRVFDLFD-TKHNG-ILDFEEFARALSIFHP-NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        86 ~~~~lf~~~d-~~~~g-~i~~~ef~~~~~~~~~-~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      .+..+|+.+| .+++| .|+.+||..++..... ...+.+.+..+|+.+|.|++|.|+.+||..++..+.
T Consensus        11 ~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~~~   80 (92)
T 2kax_A           11 TMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTMLC   80 (92)
T ss_dssp             HHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            3578999999 99999 9999999999876321 014556789999999999999999999999998763

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=98.80  E-value=3.1e-08  Score=62.45  Aligned_cols=68  Identities=24%  Similarity=0.425  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHhhc-ccCCCCC-cccHHHHHHHHhc-----CC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           45 SEIEALYELFKKIS-SAVIDDG-LINKEEFQLALFK-----TN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        45 ~~i~~l~~~F~~~d-~~~~~~g-~i~~~ef~~~l~~-----~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      .++..+...|..+| .+  ++| .|+..+|..++..     .+ ......++.+|..+|.+++|.|+|+||+.++...
T Consensus         6 ~~~~~l~~~F~~~D~~d--~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~   81 (93)
T 1k2h_A            6 TAMETLINVFHAHSGKE--GDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (93)
T ss_dssp             HHHHHHHHHHHHHHTTS--SCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccC--CCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            45778999999999 79  999 9999999998865     33 3345678999999999999999999999987653

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=98.80  E-value=1.4e-08  Score=61.41  Aligned_cols=66  Identities=23%  Similarity=0.321  Sum_probs=54.9

Q ss_pred             HHHHHHHHHhh-cccCCCC-CcccHHHHHHHHhcCCC-C--CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           47 IEALYELFKKI-SSAVIDD-GLINKEEFQLALFKTNK-K--ESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        47 i~~l~~~F~~~-d~~~~~~-g~i~~~ef~~~l~~~~~-~--~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ...+...|..+ |.+  ++ |.|+..+|..++...+. .  ....+..+|..+|.+++|.|+|+||+.++..+
T Consensus         4 ~~~l~~~F~~~~D~d--~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~   74 (76)
T 1qx2_A            4 PEEIKGAFEVFAAKE--GDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             HHHHHHHHHHHHTSS--SCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccC--CCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            35688899999 999  99 99999999999866332 2  33457899999999999999999999988764

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=98.79  E-value=7.6e-09  Score=61.79  Aligned_cols=64  Identities=27%  Similarity=0.402  Sum_probs=55.3

Q ss_pred             HHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           47 IEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        47 i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      ...+...|..+|.+  ++|.|+..+|..++...+. .....+..+|..+|.+++|.|+|+||..++.
T Consensus         5 ~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~   69 (71)
T 2b1u_A            5 LEDLQVAFRAFDQD--GDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA   69 (71)
T ss_dssp             HHHHHHHHTTSCCS--SSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred             HHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            45688999999999  9999999999999877543 3456789999999999999999999998774

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=98.79  E-value=3.1e-09  Score=62.65  Aligned_cols=62  Identities=29%  Similarity=0.409  Sum_probs=51.6

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      +...|..+|.+  ++|.|+..+|..++...+. .....++.+|+.+|.+++|.|+|+||..++..
T Consensus         2 l~~~F~~~D~d--~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~   64 (66)
T 3li6_A            2 AEALFKEIDVN--GDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS   64 (66)
T ss_dssp             CCHHHHHHCTT--CSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred             HHHHHHHHCCC--CCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            35689999999  9999999999998866332 23456789999999999999999999998754

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=98.78  E-value=2.4e-08  Score=63.74  Aligned_cols=65  Identities=20%  Similarity=0.152  Sum_probs=54.8

Q ss_pred             HHHHHHHHHh-cCCCC-cccHHHHHHHHHh-----hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           86 FADRVFDLFD-TKHNG-ILDFEEFARALSI-----FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        86 ~~~~lf~~~d-~~~~g-~i~~~ef~~~~~~-----~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .+..+|+.|| .+++| .|+.+||..++..     +.. ..+.+.+..+++.+|.|++|.|+++||..++...
T Consensus        13 ~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~-~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~~   84 (95)
T 2wcb_A           13 GIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKN-IKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA   84 (95)
T ss_dssp             HHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHH-CCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccc-cccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            3678999999 78887 9999999999875     222 2456789999999999999999999999998765

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=98.78  E-value=3e-08  Score=64.65  Aligned_cols=67  Identities=12%  Similarity=0.088  Sum_probs=54.4

Q ss_pred             HHHHHHHHHh-cCCC-CcccHHHHHHHHHh-hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           86 FADRVFDLFD-TKHN-GILDFEEFARALSI-FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        86 ~~~~lf~~~d-~~~~-g~i~~~ef~~~~~~-~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      .+..+|+.|| .+++ |.|+.+||..++.. +.......+.+..+++.+|.|++|.|+++||..++....
T Consensus        23 ~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~~   92 (106)
T 2h2k_A           23 TVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELA   92 (106)
T ss_dssp             HHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence            3678999999 6886 79999999999975 332112236789999999999999999999999987653

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=98.77  E-value=4.2e-09  Score=65.05  Aligned_cols=67  Identities=21%  Similarity=0.273  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC---CCCHHHHHH----HHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           46 EIEALYELFKKISSAVIDDGLINKEEFQLALFKTN---KKESLFADR----VFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~---~~~~~~~~~----lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      +.+.+...|..+|.+  ++|.|+..+|..++...+   ......+..    +|+.+|.+++|.|+|+||+..+..+
T Consensus         5 ~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~~   78 (83)
T 1yx7_A            5 VKAELEAAFKKLDAN--GDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAEL   78 (83)
T ss_dssp             SCTHHHHHHHHHSSS--CSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHHH
Confidence            345788999999999  999999999999986643   223334566    9999999999999999999776654

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=98.77  E-value=3.4e-08  Score=63.77  Aligned_cols=63  Identities=17%  Similarity=0.207  Sum_probs=49.3

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHh----hCCCCChh-----------HHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSI----FHPNSPID-----------DKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~----~~~~~~~~-----------e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      ++.+|+.+|.+++|.|+..||..++..    +.......           ..+..+|+.+|.|++|.|+.+||..++.
T Consensus        22 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~   99 (103)
T 1snl_A           22 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ   99 (103)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHh
Confidence            578899999999999999999888875    22211111           2478899999999999999999998863

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=98.77  E-value=3.9e-08  Score=62.74  Aligned_cols=66  Identities=14%  Similarity=0.111  Sum_probs=52.3

Q ss_pred             HHHHHHHHHh-cCC-CCcccHHHHHHHHHhhC----CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           86 FADRVFDLFD-TKH-NGILDFEEFARALSIFH----PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        86 ~~~~lf~~~d-~~~-~g~i~~~ef~~~~~~~~----~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .+..+|+.+| .++ +|.|+.+|+..++....    ....+.+.+..+++.+|.|++|.|+++||..++...
T Consensus        10 ~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   81 (95)
T 1j55_A           10 MIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI   81 (95)
T ss_dssp             HHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence            3578999999 687 58999999999997632    112345679999999999999999999999998765

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=98.77  E-value=4.5e-08  Score=63.77  Aligned_cols=69  Identities=23%  Similarity=0.431  Sum_probs=61.0

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ++.+++.++...|..+|+   ++|+|+..++..++...+.. ...+..+++.+|.+++|.|+|+||+.++..+
T Consensus         9 ls~~e~~~~~~~F~~~D~---~dG~Is~~el~~~l~~~gl~-~~el~~i~~~~D~d~dG~id~~EF~~~m~~~   77 (106)
T 1eh2_A            9 VKPEDKAKYDAIFDSLSP---VNGFLSGDKVKPVLLNSKLP-VDILGRVWELSDIDHDGMLDRDEFAVAMFLV   77 (106)
T ss_dssp             SCHHHHHHHHHHHTTSCC---SSSCCBHHHHHHHHHTTTCC-HHHHHHHHHHHCSSCSSBCCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCC---CCCeEcHHHHHHHHHHcCCC-HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            678899999999999997   58999999999999887644 5668999999999999999999999987654

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=98.77  E-value=2.9e-08  Score=64.43  Aligned_cols=69  Identities=16%  Similarity=0.194  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           44 VSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        44 ~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      +.++..+...|..+|.+  ++|.|+..+|..++...+. .....+..+|..+|.+++|.|+|++|..++...
T Consensus        28 ~~~~~~l~~~F~~~D~d--~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~   97 (107)
T 2d58_A           28 PSKLEGFKEKYMEFDLN--GNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK   97 (107)
T ss_dssp             HHHHHHHHHHHTTSCCC--TTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSS
T ss_pred             HHHHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHc
Confidence            57788999999999999  9999999999999977543 355678999999999999999999999988644

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=98.77  E-value=6.4e-08  Score=65.98  Aligned_cols=63  Identities=13%  Similarity=0.147  Sum_probs=45.3

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ..++.+|+.+| +++|.|+.+|+..++...   +.+.+.+..+|+..|.|++|.|+++||..+|..+
T Consensus        51 ~~l~~~F~~fD-d~dG~Is~~El~~~l~~~---gl~~~el~~I~~~~D~d~dG~Ld~~EF~~am~li  113 (139)
T 2jq6_A           51 PTYDEIFYTLS-PVNGKITGANAKKEMVKS---KLPNTVLGKIWKLADVDKDGLLDDEEFALANHLI  113 (139)
T ss_dssp             HHHHHHHHHSC-CSSSEEEHHHHHHHHHHT---TCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhC-CCCCeECHHHHHHHHHHh---CcCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            34567777777 777777777777777663   3456677777777777777778887777777655

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=98.76  E-value=1.2e-08  Score=62.65  Aligned_cols=65  Identities=26%  Similarity=0.414  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-C-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           46 EIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-K-KESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      ....+. .|..+|.+  ++|.|+..+|..++...+ . .....+..+|..+|.+++|.|+|++|..++..
T Consensus         7 ~~~~l~-~F~~~D~d--~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~   73 (81)
T 1c7v_A            7 EEEILR-AFKVFDAN--GDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK   73 (81)
T ss_dssp             CHHHHH-HHHHHSCS--GGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             HHHHHH-HHHHHCCC--CCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            456788 99999999  999999999999987754 3 35667899999999999999999999998864

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=98.76  E-value=1.9e-08  Score=62.95  Aligned_cols=64  Identities=14%  Similarity=0.121  Sum_probs=35.0

Q ss_pred             HHHHHHHHh-cCCCC-cccHHHHHHHHHh---hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           87 ADRVFDLFD-TKHNG-ILDFEEFARALSI---FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        87 ~~~lf~~~d-~~~~g-~i~~~ef~~~~~~---~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      +..+|+.+| .+++| .|+..||..++..   +.. ....+.++.+|+.+|.|++|.|+.+||..++..+
T Consensus        12 l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   80 (90)
T 1k8u_A           12 LVAIFHKYSGREGDKHTLSKKELKELIQKELTIGS-KLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL   80 (90)
T ss_dssp             HHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGG-GTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCC-CCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            345555555 35555 5666665555553   222 2334455666666666666666666666655443

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=98.75  E-value=9.8e-09  Score=89.13  Aligned_cols=124  Identities=10%  Similarity=0.113  Sum_probs=97.8

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--CC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--NK   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~~   81 (178)
                      ..|..+|..+..+.++.++.     ..+.......+  ++..+   +...|..+|.+  ++|.|++.+|..++...  ..
T Consensus       725 ~~~~~~F~~~D~d~~G~I~~-----~El~~~l~~~g~~~~~~~---~~~~~~~~D~d--~dG~I~~~EF~~~~~~~~~~~  794 (863)
T 1sjj_A          725 NEFRASFNHFDRKKTGMMDC-----EDFRACLISMGYNMGEAE---FARIMSIVDPN--RMGVVTFQAFIDFMSRETADT  794 (863)
T ss_dssp             HHHHHHHTTTCSSSSSEEES-----TTHHHHHHHHTCCCCTHH---HHHHHHHHCTT--SCSEEETTHHHHTHHHHSTTC
T ss_pred             HHHHHHHHHHCCCCCCCcCH-----HHHHHHHHHcCCCCCHHH---HHHHHHHhCCC--CCCcCcHHHHHHHHHHHhcCC
Confidence            44667777788788888888     88888766544  34444   55567777888  99999999999887542  22


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCC-----CCCceeHHHHHHHH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLK-----QQGFIERQEVKQMV  148 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d-----~~G~I~~~e~~~~l  148 (178)
                      .....+..+|+.+ .+++|.|+.+||..++.        ++.+..+|+.+|.+     ++|.|+++||..++
T Consensus       795 ~~~~~l~~aF~~~-~d~~G~Is~~El~~~l~--------~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~  857 (863)
T 1sjj_A          795 DTADQVMASFKIL-AGDKNYITVDELRRELP--------PDQAEYCIARMAPYNGRDAVPGALDYMSFSTAL  857 (863)
T ss_dssp             SSSHHHHHHHHGG-GTSSSEEEHHHHHHHSC--------HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHH
T ss_pred             CCHHHHHHHHHHH-hCCCCcCcHHHHHHHCC--------HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHH
Confidence            3345678999999 89999999999999873        56788999999987     79999999999887

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=98.75  E-value=3.9e-08  Score=61.47  Aligned_cols=68  Identities=21%  Similarity=0.338  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHhhc-ccCCCCC-cccHHHHHHHHhc---CCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           45 SEIEALYELFKKIS-SAVIDDG-LINKEEFQLALFK---TNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        45 ~~i~~l~~~F~~~d-~~~~~~g-~i~~~ef~~~l~~---~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ..+..+...|..+| ++  ++| .|+..+|..++..   .+. .....++.+|+.+|.+++|.|+|+||..++..+
T Consensus         7 ~~~~~l~~~F~~~D~~d--~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   80 (90)
T 1k8u_A            7 QAIGLLVAIFHKYSGRE--GDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL   80 (90)
T ss_dssp             HHHHHHHHHHHHHHTSS--SCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccC--CCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            34678999999999 59  999 9999999999875   432 334568999999999999999999999887643

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=98.74  E-value=2.1e-08  Score=63.56  Aligned_cols=62  Identities=16%  Similarity=0.177  Sum_probs=30.5

Q ss_pred             HHHHHHHhc-CCCC-cccHHHHHHHH-HhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           88 DRVFDLFDT-KHNG-ILDFEEFARAL-SIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        88 ~~lf~~~d~-~~~g-~i~~~ef~~~~-~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ..+|+.+|. +++| .|+..||..++ ..+.. ......+..+|+.+|.|++|.|+.+||..++..
T Consensus        13 ~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~-~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~   77 (93)
T 1xk4_A           13 IDVYHKYSLIKGNFHAVYRDDLKKLLETESPQ-YIRKKGADVWFKELDINTDGAVNFQEFLILVIK   77 (93)
T ss_dssp             HHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCH-HHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHhhcCCCcCeECHHHHHHHHHHHCcc-cCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            445555555 5555 55555555554 22211 111123455555666666666666666555544

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=98.74  E-value=3.1e-08  Score=67.56  Aligned_cols=66  Identities=24%  Similarity=0.357  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           44 VSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        44 ~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      .++...+...|..+| +  ++|+|+..++..++...+.. ...+..+++..|.+++|.|+|+||+.++..
T Consensus        47 ~~e~~~l~~~F~~fD-d--~dG~Is~~El~~~l~~~gl~-~~el~~I~~~~D~d~dG~Ld~~EF~~am~l  112 (139)
T 2jq6_A           47 GKDKPTYDEIFYTLS-P--VNGKITGANAKKEMVKSKLP-NTVLGKIWKLADVDKDGLLDDEEFALANHL  112 (139)
T ss_dssp             GGTHHHHHHHHHHSC-C--SSSEEEHHHHHHHHHHTTCC-HHHHHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhC-C--CCCeECHHHHHHHHHHhCcC-HHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            456788999999999 8  99999999999999876544 566899999999999999999999988754

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=98.73  E-value=1.8e-08  Score=63.85  Aligned_cols=68  Identities=16%  Similarity=0.302  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHhhcc-cCCCCC-cccHHHHHHHH-hcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           45 SEIEALYELFKKISS-AVIDDG-LINKEEFQLAL-FKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        45 ~~i~~l~~~F~~~d~-~~~~~g-~i~~~ef~~~l-~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ..+..+...|..+|. +  ++| .|+..+|..++ ...+.. ....+..+|+.+|.+++|.|+|+||+.++..+
T Consensus         7 ~~~~~l~~~F~~~D~~d--~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~   78 (93)
T 1xk4_A            7 KALNSIIDVYHKYSLIK--GNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM   78 (93)
T ss_dssp             HHHHHHHHHHHHHHTSS--SCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcC--CCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            456789999999999 9  999 99999999998 443311 12346899999999999999999999988654

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=98.73  E-value=1.6e-08  Score=61.55  Aligned_cols=67  Identities=22%  Similarity=0.323  Sum_probs=55.5

Q ss_pred             HHHHHHHHHhhcc-cCCCCC-cccHHHHHHHHhc-CCC-C-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 030405           47 IEALYELFKKISS-AVIDDG-LINKEEFQLALFK-TNK-K-ESLFADRVFDLFDTKHNGILDFEEFARALSIFH  115 (178)
Q Consensus        47 i~~l~~~F~~~d~-~~~~~g-~i~~~ef~~~l~~-~~~-~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~  115 (178)
                      +..+...|..+|. +  ++| .|+..+|..++.. .+. . ....++.+|+.+|.+++|.|+|+||..++..+.
T Consensus         6 ~~~l~~~F~~~D~~d--~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~   77 (78)
T 1cb1_A            6 PAELKSIFEKYAAKE--GDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKIS   77 (78)
T ss_dssp             HHHHHHHHHHHHTTS--SSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhccC--CCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHhc
Confidence            5678899999998 8  999 9999999999864 332 2 344568899999999999999999999887653

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A

Probab=98.73  E-value=8e-08  Score=63.77  Aligned_cols=68  Identities=19%  Similarity=0.340  Sum_probs=48.0

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      +++++..++.+.|..+|+   ++|+|+..+++.++...+.. ...+.++++..|.+++|.|+++||+.++..
T Consensus        27 it~ee~~~y~~iF~~lD~---~dG~Isg~elr~~~~~sgLp-~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~L   94 (121)
T 3fia_A           27 ITVEERAKHDQQFHSLKP---ISGFITGDQARNFFFQSGLP-QPVLAQIWALADMNNDGRMDQVEFSIAMKL   94 (121)
T ss_dssp             CCHHHHHHHHHHHHHTCC---BTTBEEHHHHHHHHGGGCCC-HHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCC---CCCeECHHHHHHHHHHcCCC-HHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence            566777777777777765   47777777777777665443 445677777777777777777777776653

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=98.73  E-value=2.6e-09  Score=66.62  Aligned_cols=69  Identities=29%  Similarity=0.385  Sum_probs=57.7

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARAL  111 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~  111 (178)
                      .+++.++..+...|..+|++  ++|.|+..+|..++...+. .....+..+|+.+|.+++|.|+|++|+.++
T Consensus        16 ~l~~~~~~~~~~~F~~~D~d--~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~   85 (87)
T 1s6j_A           16 RLSEEEIGGLKELFKMIDTD--NSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             SSCSSSTTTTTTHHHHHCTT--CSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HCCHHHHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            35555666788999999999  9999999999999977543 345678999999999999999999997643

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=98.72  E-value=8.3e-08  Score=61.18  Aligned_cols=66  Identities=30%  Similarity=0.470  Sum_probs=42.0

Q ss_pred             HHHHHHHHHHhhc-ccCCCCC-cccHHHHHHHHhc-C-----CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           46 EIEALYELFKKIS-SAVIDDG-LINKEEFQLALFK-T-----NKKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        46 ~i~~l~~~F~~~d-~~~~~~g-~i~~~ef~~~l~~-~-----~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      .+..+...|..+| .+  ++| .|+..+|..++.. .     .......++.+|+.+|.+++|.|+|+||..++..
T Consensus        11 ~~~~l~~~F~~~Dd~d--~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~   84 (99)
T 1qls_A           11 CIESLIAIFQKHAGRD--GNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGG   84 (99)
T ss_dssp             HHHHHHHHHHHHHTTS--SCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcC--CCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            3556777777776 77  777 8888888777752 1     1123344566666666666666666666665543

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=98.69  E-value=5.9e-08  Score=62.58  Aligned_cols=68  Identities=19%  Similarity=0.278  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           45 SEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        45 ~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      .....+...|..+|.+  ++|.|+..+|..++...+ ......++.+|..+|.+++|.|+|++|+..+...
T Consensus        21 ~~~~~l~~~F~~~D~d--~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~~   89 (105)
T 1wlz_A           21 SHYHAITQEFENFDTM--KTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSSE   89 (105)
T ss_dssp             HTHHHHHHHHHHHCTT--CSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC--
T ss_pred             chHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcc
Confidence            3457789999999999  999999999999987744 3345678999999999999999999999988643

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=98.67  E-value=8.5e-08  Score=82.38  Aligned_cols=107  Identities=13%  Similarity=0.156  Sum_probs=81.8

Q ss_pred             hcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHH-------hcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHH
Q 030405           57 ISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLF-------DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQ  129 (178)
Q Consensus        57 ~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~-------d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~  129 (178)
                      +|.+  ++|.|+..++..++..... ....+..+++..       |.+++|.|+|+||..++..+..    +++++.+|+
T Consensus       164 fd~n--~dG~Is~kEl~~~l~~~~~-~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~~----R~EI~eiF~  236 (816)
T 3qr0_A          164 TVEM--EKNKIPVKAIQKCLSKDKD-DRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLE----RSEIEGIFK  236 (816)
T ss_dssp             HTSC--CSSEEEHHHHHHHHCSCHH-HHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHCC----CTHHHHHHH
T ss_pred             ccCC--CCCCCCHHHHHHHHHhcCC-hHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcCC----HHHHHHHHH
Confidence            5778  9999999999998854321 123356677776       4566789999999999998864    357999999


Q ss_pred             hhCCCCCCceeHHHHHHHHHHHHhhcC------CCCCHHHHHHHHHHH
Q 030405          130 LYDLKQQGFIERQEVKQMVVATLTESG------MNLSDDVIESIIDKV  171 (178)
Q Consensus       130 ~~D~d~~G~I~~~e~~~~l~~~~~~~~------~~l~~~~~~~~~~~~  171 (178)
                      .|+.+++|.|+. ||.++|...-....      +.++.+++.+++++.
T Consensus       237 ~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~ky  283 (816)
T 3qr0_A          237 ELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDY  283 (816)
T ss_dssp             HHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHH
T ss_pred             HHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHh
Confidence            999999999999 99999987621110      126888888888764

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=98.67  E-value=1.5e-07  Score=61.92  Aligned_cols=66  Identities=12%  Similarity=0.101  Sum_probs=55.4

Q ss_pred             HHHHHHHHhc-CCCC-cccHHHHHHHHH-hhCCC--C--ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           87 ADRVFDLFDT-KHNG-ILDFEEFARALS-IFHPN--S--PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        87 ~~~lf~~~d~-~~~g-~i~~~ef~~~~~-~~~~~--~--~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      +..+|+.+|. +++| .|+.+||..++. .+...  .  ...+.+..+|+.+|.|++|.|+++||..++..+.
T Consensus        14 l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~   86 (113)
T 1xk4_C           14 IINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT   86 (113)
T ss_dssp             HHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH
Confidence            5789999995 9999 999999999998 44321  1  2467899999999999999999999999987753

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=98.66  E-value=7.6e-08  Score=66.18  Aligned_cols=63  Identities=13%  Similarity=0.113  Sum_probs=56.7

Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .+..+|+.+|.+++|.|+.+||..++..+.. ....+.+..+|+.+|.|++|.|+++||..++.
T Consensus        49 ~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~-~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~  111 (147)
T 1wy9_A           49 AFKVKYMEFDLNGNGDIDIMSLKRMLEKLGV-PKTHLELKRLIREVSSGSEETFSYSDFLRMML  111 (147)
T ss_dssp             HHHHHHTTSCCCTTSSEEHHHHHHHHHHTTC-CCCHHHHHHHHHHHCSSCTTEECHHHHHHHHC
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            3688999999999999999999999988765 45678899999999999999999999999874

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=98.64  E-value=1.2e-07  Score=60.43  Aligned_cols=66  Identities=15%  Similarity=0.166  Sum_probs=55.0

Q ss_pred             HHHHHHHHHh-cCCCC-cccHHHHHHHHHh-hC---CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           86 FADRVFDLFD-TKHNG-ILDFEEFARALSI-FH---PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        86 ~~~~lf~~~d-~~~~g-~i~~~ef~~~~~~-~~---~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .+..+|..+| .+++| .|+.+||..++.. +.   ......+.+..+|+.+|.|++|.|+.+||..++..+
T Consensus        14 ~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~~   85 (99)
T 1qls_A           14 SLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL   85 (99)
T ss_dssp             HHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            3578999998 99999 9999999998873 21   013456789999999999999999999999998765

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=98.64  E-value=8.6e-08  Score=61.22  Aligned_cols=66  Identities=23%  Similarity=0.453  Sum_probs=40.7

Q ss_pred             HHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-C----C-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           45 SEIEALYELFKKISSAVIDDGLINKEEFQLALFK-T----N-KKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        45 ~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~----~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      +++..++.+|..+|.   .+|+|+..+|..++.. .    + ......++.+++.+|.+++|.|+|+||+.++..
T Consensus         6 ~~~~~l~~~F~~fD~---~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~   77 (96)
T 1a4p_A            6 HAMETMMFTFHKFAG---DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG   77 (96)
T ss_dssp             HHHHHHHHHHHHHHG---GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcC---CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            345667777777772   2357777777777643 1    1 122334566777777777777777777766643

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=98.63  E-value=9.1e-08  Score=65.96  Aligned_cols=65  Identities=11%  Similarity=0.109  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ..+..+|+.+|.+++|.|+.+||..++..+.. ....+.+..+|+.+|.|++|.|+++||..++..
T Consensus        50 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~  114 (150)
T 2jjz_A           50 TAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGV-PKTHLEMKKMISEVTGGVSDTISYRDFVNMMLG  114 (150)
T ss_dssp             HHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTC-CCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHS
T ss_pred             HHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCC-CCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            34688999999999999999999999988765 456788999999999999999999999998853

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=98.62  E-value=3.3e-08  Score=84.98  Aligned_cols=99  Identities=10%  Similarity=0.147  Sum_probs=65.0

Q ss_pred             HHHHHHHHhhc-------ccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC--
Q 030405           48 EALYELFKKIS-------SAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS--  118 (178)
Q Consensus        48 ~~l~~~F~~~d-------~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~--  118 (178)
                      +.+...+...|       .+  ++|.|+.++|..++....  ....+..+|+.+|.+++|.|+.++|..++...+...  
T Consensus       179 ~ev~~li~~~d~~~~~~D~d--~~g~idf~EF~~~~~~l~--~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~  254 (799)
T 2zkm_X          179 KRVEAALSACHLPKGKNDAI--NPEDFPEPVYKSFLMSLC--PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRL  254 (799)
T ss_dssp             HHHHHHHHHTTCCCCTTCEE--CGGGCCHHHHHHHHHHHS--CCHHHHTTCC--------CCCHHHHHHHHHHTCC----
T ss_pred             HHHHHHHHHhCcCccccccC--CCCcCCHHHHHHHHHHcc--CHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCccc
Confidence            34455566555       35  789999999999876642  235578999999999999999999999998875422  


Q ss_pred             -------ChhHHHHHHHHhhCCC----CCCceeHHHHHHHHHH
Q 030405          119 -------PIDDKIEFSFQLYDLK----QQGFIERQEVKQMVVA  150 (178)
Q Consensus       119 -------~~~e~~~~~F~~~D~d----~~G~I~~~e~~~~l~~  150 (178)
                             ..++.++.+++.+|.|    ++|.|+.+||..+|..
T Consensus       255 ~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L~S  297 (799)
T 2zkm_X          255 NSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCG  297 (799)
T ss_dssp             -----------CHHHHHHHHCCC--------CCHHHHHHHHHS
T ss_pred             ccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhcccC
Confidence                   3456789999999999    8999999999999854

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=98.58  E-value=5.6e-08  Score=62.58  Aligned_cols=66  Identities=24%  Similarity=0.385  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC-----C---CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           45 SEIEALYELFKKISSAVIDDGLINKEEFQLALFKT-----N---KKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        45 ~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~-----~---~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      +++..++.+|..+|.+   +|+|+..+|..++...     +   ......++.+++.+|.+++|.|+|+||+.++..
T Consensus         7 ~~~~~l~~~F~~fD~~---~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~   80 (100)
T 1psr_A            7 RSIIGMIDMFHKYTRR---DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD   80 (100)
T ss_dssp             HHHHHHHHHHHHTCCT---TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC---CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            4577788888888854   5788888888877541     1   112234567777788888888888888777653

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=98.56  E-value=2e-07  Score=59.48  Aligned_cols=64  Identities=13%  Similarity=0.092  Sum_probs=52.5

Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHh-----hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSI-----FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~-----~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .+..+|+.+|. .+|.|+..|+..++..     +.. ..+.+.+..+++.+|.|++|.|+++||..++...
T Consensus        10 ~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~-~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~   78 (96)
T 1a4p_A           10 TMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLEN-QKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL   78 (96)
T ss_dssp             HHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHH-SCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcC-CCCeECHHHHHHHHHHHccccccc-ccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            36789999994 4679999999999865     221 2345789999999999999999999999998765

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A

Probab=98.49  E-value=1.3e-06  Score=57.96  Aligned_cols=63  Identities=11%  Similarity=0.117  Sum_probs=56.2

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT  153 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~  153 (178)
                      .+.+|+.+|. ++|.|+-++...++...   +.+.+.+..++++.|.|++|.|+++||..+|.-+..
T Consensus        35 y~~iF~~lD~-~dG~Isg~elr~~~~~s---gLp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~Li~~   97 (121)
T 3fia_A           35 HDQQFHSLKP-ISGFITGDQARNFFFQS---GLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKL   97 (121)
T ss_dssp             HHHHHHHTCC-BTTBEEHHHHHHHHGGG---CCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCC-CCCeECHHHHHHHHHHc---CCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHH
Confidence            5789999998 79999999999999865   467888999999999999999999999999887643

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=98.47  E-value=1.2e-08  Score=68.30  Aligned_cols=81  Identities=22%  Similarity=0.180  Sum_probs=50.2

Q ss_pred             CCcccHHHHHH-----HHhcCCCC--CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCC
Q 030405           64 DGLINKEEFQL-----ALFKTNKK--ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQ  136 (178)
Q Consensus        64 ~g~i~~~ef~~-----~l~~~~~~--~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~  136 (178)
                      +|.|+..+|..     ++......  ....+..+|+.+|    |.|+.+|+..++..+..   +++.+..+|+.+|.|++
T Consensus        22 ~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~~lG~---t~~ei~~~~~~~D~d~d   94 (123)
T 2kld_A           22 KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLKGKGH---TDAEIEAIFTKYDQDGD   94 (123)
T ss_dssp             -----------------------------CCSCSSTTTT----TCEEHHHHHHHTTTCCS---SHHHHHHHHHHHSSSSC
T ss_pred             CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHHHhCC---CHHHHHHHHHHHcCCCC
Confidence            47899999988     55432111  1122456788887    99999999999877643   77889999999999999


Q ss_pred             CceeHHHHHHHHHHH
Q 030405          137 GFIERQEVKQMVVAT  151 (178)
Q Consensus       137 G~I~~~e~~~~l~~~  151 (178)
                      |.|+++||..++..+
T Consensus        95 G~I~~~EF~~~~~~~  109 (123)
T 2kld_A           95 QELTEHEHQQMRDDL  109 (123)
T ss_dssp             CEECSHHHHHCSCTT
T ss_pred             CcCcHHHHHHHHHHH
Confidence            999999999987544

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=98.46  E-value=4.3e-07  Score=58.51  Aligned_cols=61  Identities=20%  Similarity=0.351  Sum_probs=49.9

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHHHhc-----CCCCC-H-----------HHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLALFK-----TNKKE-S-----------LFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-----~~~~~-~-----------~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      +...|..+|.+  ++|+|+..+|..++..     .+... .           ..+..+|..+|.+++|.|+++||+.++.
T Consensus        22 ~~~~F~~~D~d--~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~   99 (103)
T 1snl_A           22 PKTFFILHDIN--SDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ   99 (103)
T ss_dssp             HHHHHHHHCSS--CCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHcCC--CCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHh
Confidence            67789999999  9999999999998864     22211 1           2378899999999999999999998874

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=98.44  E-value=1.6e-07  Score=60.39  Aligned_cols=65  Identities=11%  Similarity=0.090  Sum_probs=52.1

Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhCC----C--CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFHP----N--SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~----~--~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .+..+|+.+|.+ +|.|+.+|+..++.....    .  ...++.+..+|+.+|.|++|.|+++||..++...
T Consensus        11 ~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~   81 (100)
T 1psr_A           11 GMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI   81 (100)
T ss_dssp             HHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            357899999976 789999999999875210    0  1234568889999999999999999999998765

>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3

Probab=98.35  E-value=1.5e-06  Score=59.69  Aligned_cols=60  Identities=20%  Similarity=0.254  Sum_probs=52.8

Q ss_pred             HHHHHHHHHhcC-CCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           86 FADRVFDLFDTK-HNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        86 ~~~~lf~~~d~~-~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      .+...|..+|.| ++|.|+..|+..+...+.   .++..+..+|+.+|.|+||.||.+||..++
T Consensus        78 ~l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~---~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Cl  138 (151)
T 1sra_A           78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLI---PMEHCTTRFFETCDLDNDKYIALDEWAGCF  138 (151)
T ss_dssp             HHHHHHHHHCCTTCSSEECTTTTGGGGSTTS---TTGGGHHHHHHHHCTTCSSSEEHHHHHHHT
T ss_pred             HHHhHHHHHCCCCCCCcCcHHHHHHHHHHhc---ChHHHHHHHHHHhCCCCCCcCCHHHHHHHh
Confidence            467899999997 999999999988876553   466779999999999999999999999987

>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=98.29  E-value=4.2e-06  Score=55.21  Aligned_cols=88  Identities=16%  Similarity=0.206  Sum_probs=65.9

Q ss_pred             CCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHh------cCCCCcccHHHHHHHHHhhCCCC-ChhHHHHHHHHhhCCCC
Q 030405           63 DDGLINKEEFQLALFKTNKKESLFADRVFDLFD------TKHNGILDFEEFARALSIFHPNS-PIDDKIEFSFQLYDLKQ  135 (178)
Q Consensus        63 ~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d------~~~~g~i~~~ef~~~~~~~~~~~-~~~e~~~~~F~~~D~d~  135 (178)
                      ..+.+++++|..+-...... +..++.+++.|.      ...+|.|++++|..++..+...+ .+.+....+|+.||.|+
T Consensus         4 ~~s~lspe~l~~L~~~t~fs-~~elk~~y~~F~~g~~~k~cp~G~i~~e~F~~i~~~ffp~~~~p~~~~~~lF~~Fd~~~   82 (118)
T 1tuz_A            4 ERGLISPSDFAQLQKYMEYS-TKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGH   82 (118)
T ss_dssp             CCSCSCHHHHHHHHHHHHHC-CCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCC
T ss_pred             ccCcCCHHHHHHHHHHcccC-HHHHHHHHHHHccccccccCCCCCCCHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhccc
Confidence            34578888887754332211 112466666662      34579999999999999888765 67778888999999985


Q ss_pred             --------CCceeHHHHHHHHHHH
Q 030405          136 --------QGFIERQEVKQMVVAT  151 (178)
Q Consensus       136 --------~G~I~~~e~~~~l~~~  151 (178)
                              +|.|+..||...|..+
T Consensus        83 ~~~~~~~~~g~I~fkefi~~LSll  106 (118)
T 1tuz_A           83 CLNETNVTKDVVCLNDVSCYFSLL  106 (118)
T ss_dssp             CTTCCCCCSCCEEHHHHHHHHHHH
T ss_pred             ccccccCCCCeEeHHHHHHHHHHh
Confidence                    8999999999998775

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=98.19  E-value=9.7e-08  Score=63.79  Aligned_cols=72  Identities=21%  Similarity=0.234  Sum_probs=32.0

Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHH-----HHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCC
Q 030405           86 FADRVFDLFDTKHNGILDFEEFAR-----ALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLS  160 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~-----~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~  160 (178)
                      .+..++..+    +|.|+|+||+.     ++..........+.++.+|+.||    |+|+.+|++.++..+    |.  +
T Consensus        13 ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~~l----G~--t   78 (123)
T 2kld_A           13 EVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLKGK----GH--T   78 (123)
T ss_dssp             ------------------------------------------CCSCSSTTTT----TCEEHHHHHHHTTTC----CS--S
T ss_pred             HHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHHHh----CC--C
Confidence            345555544    78899999998     55543322233456788999998    999999999998664    65  8


Q ss_pred             HHHHHHHHHHH
Q 030405          161 DDVIESIIDKV  171 (178)
Q Consensus       161 ~~~~~~~~~~~  171 (178)
                      +++++.++..+
T Consensus        79 ~~ei~~~~~~~   89 (123)
T 2kld_A           79 DAEIEAIFTKY   89 (123)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            88887766654

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=98.17  E-value=5.3e-06  Score=71.87  Aligned_cols=100  Identities=10%  Similarity=0.074  Sum_probs=79.2

Q ss_pred             HHHHHHHhhcccC-----CCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC-----
Q 030405           49 ALYELFKKISSAV-----IDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS-----  118 (178)
Q Consensus        49 ~l~~~F~~~d~~~-----~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~-----  118 (178)
                      ++...|...|.+.     .++|.++.++|..++.....  ...++.+|+.++.+++|.|+.++|..++...+...     
T Consensus       184 ~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~--R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~  261 (885)
T 3ohm_B          184 RVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL--RPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEV  261 (885)
T ss_dssp             HHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC--CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTT
T ss_pred             HHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC--HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCccccccc
Confidence            4556666665420     14678999999998865322  35679999999999999999999999999887531     


Q ss_pred             ----ChhHHHHHHHHhhCCC----CCCceeHHHHHHHHHH
Q 030405          119 ----PIDDKIEFSFQLYDLK----QQGFIERQEVKQMVVA  150 (178)
Q Consensus       119 ----~~~e~~~~~F~~~D~d----~~G~I~~~e~~~~l~~  150 (178)
                          ...+.+..+++.|+.+    ++|.|+.++|..+|..
T Consensus       262 ~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~S  301 (885)
T 3ohm_B          262 LYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLGG  301 (885)
T ss_dssp             TSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHTS
T ss_pred             ccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhccC
Confidence                3567899999999998    7999999999999843

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=98.13  E-value=1.6e-05  Score=68.44  Aligned_cols=98  Identities=12%  Similarity=0.177  Sum_probs=78.6

Q ss_pred             HHHHHHHHhh-------cccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC--
Q 030405           48 EALYELFKKI-------SSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS--  118 (178)
Q Consensus        48 ~~l~~~F~~~-------d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~--  118 (178)
                      .++...++..       |.+  ++|.|+.++|..++.....  ...++.+|+.++.+++|.|+. +|..++...+...  
T Consensus       189 ~el~~~~~~~~~~~~k~D~~--~~g~L~FeEF~~f~~~L~~--R~EI~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~  263 (816)
T 3qr0_A          189 ARISKALEKIGWPSGKNDAI--DLKAFDFDTFFKFYLALLE--RSEIEGIFKELSKNKGNITTV-MFRDFLNDMQRHPSL  263 (816)
T ss_dssp             HHHHHHHHHHTSCCSTTCEE--ETTTCCHHHHHHHHHHHCC--CTHHHHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTTS
T ss_pred             HHHHHHHHHhcccccccccC--CCCcCCHHHHHHHHHhcCC--HHHHHHHHHHHccCCCCcccH-HHHHHHHHhCCcccc
Confidence            4566667665       556  7899999999998866432  345799999999999999999 9999999887532  


Q ss_pred             -------ChhHHHHHHHHhhCC--C----CCCceeHHHHHHHHHH
Q 030405          119 -------PIDDKIEFSFQLYDL--K----QQGFIERQEVKQMVVA  150 (178)
Q Consensus       119 -------~~~e~~~~~F~~~D~--d----~~G~I~~~e~~~~l~~  150 (178)
                             ...+.+..+++.|+.  +    ++|.|+.++|..+|..
T Consensus       264 ~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S  308 (816)
T 3qr0_A          264 HKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMC  308 (816)
T ss_dssp             CTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHS
T ss_pred             ccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhc
Confidence                   346788999999887  5    7899999999999853

>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3

Probab=97.82  E-value=1e-05  Score=55.47  Aligned_cols=64  Identities=17%  Similarity=0.240  Sum_probs=53.0

Q ss_pred             HHHHHHHHHhhcc-cCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           47 IEALYELFKKISS-AVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        47 i~~l~~~F~~~d~-~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      +..+.=.|..+|. +  ++|.|+..|+..++.... ..+.-+..+|+.+|.|++|.||++||..++..
T Consensus        76 ~~~l~W~F~~lD~n~--~DG~Isr~EL~~i~~~l~-~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg~  140 (151)
T 1sra_A           76 IFPVHWQFGQLDQHP--IDGYLSHTELAPLRAPLI-PMEHCTTRFFETCDLDNDKYIALDEWAGCFGI  140 (151)
T ss_dssp             HHHHHHHHHHHCCTT--CSSEECTTTTGGGGSTTS-TTGGGHHHHHHHHCTTCSSSEEHHHHHHHTTC
T ss_pred             hhHHHhHHHHHCCCC--CCCcCcHHHHHHHHHHhc-ChHHHHHHHHHHhCCCCCCcCCHHHHHHHhCC
Confidence            4468889999998 5  789999999998775433 44555799999999999999999999998853

>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*

Probab=97.52  E-value=4.1e-05  Score=56.40  Aligned_cols=60  Identities=20%  Similarity=0.248  Sum_probs=51.6

Q ss_pred             HHHHHHHHHhc-CCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           86 FADRVFDLFDT-KHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        86 ~~~~lf~~~d~-~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      .+...|..+|. +++|.|+..|+..+...+.   ..+.-+..+|+..|.|+||.|+.+||...+
T Consensus       156 ~v~w~F~~lD~~n~dg~l~~~El~~i~~~l~---~~~~c~~~~~~~cD~n~D~~is~~Ew~~cf  216 (229)
T 1nub_A          156 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLI---PMEHCTTRFFETCDLDNDKYIALDEWAGCF  216 (229)
T ss_dssp             HHHHHHHHHTTTTCSSEECTTTTGGGGSTTS---TTGGGHHHHHHHHCTTCSSCEEHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHHHHHh---hHHHHHHHHHHHcCCCCCCcCCHHHHHHHh
Confidence            47889999999 8999999999988775443   245568899999999999999999999887

>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*

Probab=97.21  E-value=0.00018  Score=52.88  Aligned_cols=64  Identities=17%  Similarity=0.240  Sum_probs=52.2

Q ss_pred             HHHHHHHHHhhcc-cCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           47 IEALYELFKKISS-AVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        47 i~~l~~~F~~~d~-~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      ...+.-.|..+|. +  ++|.|+..|+..++.... ..+.-+..+|+..|.|+||.|+++||...+..
T Consensus       154 ~~~v~w~F~~lD~~n--~dg~l~~~El~~i~~~l~-~~~~c~~~~~~~cD~n~D~~is~~Ew~~cf~~  218 (229)
T 1nub_A          154 IFPVHWQFGQLDQHP--IDGYLSHTELAPLRAPLI-PMEHCTTRFFETCDLDNDKYIALDEWAGCFGI  218 (229)
T ss_dssp             HHHHHHHHHHHTTTT--CSSEECTTTTGGGGSTTS-TTGGGHHHHHHHHCTTCSSCEEHHHHHHHTTC
T ss_pred             hHHHHHHHHHhCCCC--CCCCCCHHHHHHHHHHHh-hHHHHHHHHHHHcCCCCCCcCCHHHHHHHhCC
Confidence            3457788999998 8  899999999998775432 23444688999999999999999999998753

>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}

Probab=96.10  E-value=0.012  Score=48.72  Aligned_cols=65  Identities=26%  Similarity=0.376  Sum_probs=37.5

Q ss_pred             HHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           44 VSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        44 ~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      +++..+....|..+|+.   +|+|+-.+.+.++.+.+++. ..+.++|++.|.+++|.++++||..++.
T Consensus       454 ~~~~~~y~~~F~~~~~~---~g~i~g~~a~~~~~~s~Lp~-~~L~~IW~l~D~~~~g~L~~~eF~~am~  518 (550)
T 2qpt_A          454 TKDKSKYDEIFYNLAPA---DGKLSGSKAKTWMVGTKLPN-SVLGRIWKLSDVDRDGMLDDEEFALASH  518 (550)
T ss_dssp             TTTHHHHHHHHHHTCCS---SSEECHHHHHHHHHHTTCCH-HHHHHHHHHHCSSCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCC---CCeecHHHHHHHHHHcCCCH-HHHHHHhcccCCCCCCcCCHHHHHHHHH
Confidence            33555666666666643   46666666666655544433 3345666666666666666666665554

>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11

Probab=95.44  E-value=0.27  Score=32.31  Aligned_cols=72  Identities=14%  Similarity=0.220  Sum_probs=51.1

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-----CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-----KKESLFADRVFDLFDTKHNGILDFEEFARALSIFH  115 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-----~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~  115 (178)
                      +....+++.....|..+-..  +...|+...|..++....     ....-.++-+|..+ ..+...|+|++|...+..+.
T Consensus        18 ~~~~~~L~~~F~~Fa~fG~~--~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~~lA   94 (125)
T 1pul_A           18 NWDDADVKKRWDAFTKFGAA--TATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TGPKKKATFDETKKVLAFVA   94 (125)
T ss_dssp             CCCHHHHHHHHHHHHHHTCS--SSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHhcCCC--ccccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cCCcceecHHHHHHHHHHHH
Confidence            34577777888888777443  446799999999885511     12234578899999 66667899999998886543

>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}

Probab=94.79  E-value=0.13  Score=42.60  Aligned_cols=64  Identities=13%  Similarity=0.108  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ......+|...|.. +|.|+-.+-..++..-   +.+.+.+..+|.+.|.|++|.++.+||.-+|.-+
T Consensus       457 ~~~y~~~F~~~~~~-~g~i~g~~a~~~~~~s---~Lp~~~L~~IW~l~D~~~~g~L~~~eF~~am~Li  520 (550)
T 2qpt_A          457 KSKYDEIFYNLAPA-DGKLSGSKAKTWMVGT---KLPNSVLGRIWKLSDVDRDGMLDDEEFALASHLI  520 (550)
T ss_dssp             HHHHHHHHHHTCCS-SSEECHHHHHHHHHHT---TCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCC-CCeecHHHHHHHHHHc---CCCHHHHHHHhcccCCCCCCcCCHHHHHHHHHHH
Confidence            44568899999965 5999999998888643   6788999999999999999999999999888755

>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11

Probab=94.36  E-value=0.66  Score=30.48  Aligned_cols=86  Identities=10%  Similarity=0.072  Sum_probs=60.5

Q ss_pred             HHHHHHHHHhcC---CCCcccHHHHHHHHHh--hCC-CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhc--CC
Q 030405           86 FADRVFDLFDTK---HNGILDFEEFARALSI--FHP-NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTES--GM  157 (178)
Q Consensus        86 ~~~~lf~~~d~~---~~g~i~~~ef~~~~~~--~~~-~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~--~~  157 (178)
                      .++.+|..|..-   +...|+-.+|..+|..  +.. ..-+...+..+|..+ ..+...|++++|..+|..+...-  |.
T Consensus        23 ~L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~~lA~~k~~g~  101 (125)
T 1pul_A           23 DVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TGPKKKATFDETKKVLAFVAEDRARQS  101 (125)
T ss_dssp             HHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cCCcceecHHHHHHHHHHHHHHhccCC
Confidence            356666666442   3367999999998863  222 345667889999999 77888999999999999885543  32


Q ss_pred             CCCHHH-HHHHHHHHH
Q 030405          158 NLSDDV-IESIIDKVL  172 (178)
Q Consensus       158 ~l~~~~-~~~~~~~~~  172 (178)
                      ..+.++ ++++.+.+.
T Consensus       102 ~~~~~e~l~~ik~kL~  117 (125)
T 1pul_A          102 KKPIQDELDAITEKLA  117 (125)
T ss_dssp             TCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHH
Confidence            377655 666555554

>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}

Probab=94.05  E-value=0.31  Score=33.08  Aligned_cols=77  Identities=9%  Similarity=0.036  Sum_probs=44.0

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIES  166 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~  166 (178)
                      +..+++.+|.+.+|.|+..|-..++..-....+..++-   + .|+ .+|..|+.+|+...-..-   .-..+|.+++.+
T Consensus        17 i~~~H~~lDdD~dG~Id~~Es~~Flre~~~~~d~~~k~---~-~~h-~~D~~Isv~eLw~~W~~s---~V~nWTvedV~~   88 (150)
T 2l5y_A           17 LQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDATNKH---S-HLH-REDKHITIEDLWKRWKTS---EVHNWTLEDTLQ   88 (150)
T ss_dssp             HHHHHHHHSSSCSSCBCHHHHHHHHHHHTTTTCSHHHH---H-HHT-TTCCCBCHHHHHHHHHTS---HHHHCCHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCcHHHHHHHHHHHhcccCchhHH---h-hhc-CCCCeeeHHHHHHHHccC---cchhCCHHHHHH
Confidence            45667777777777777777666666544322222221   1 233 345778888877654321   012477777777


Q ss_pred             HHHHH
Q 030405          167 IIDKV  171 (178)
Q Consensus       167 ~~~~~  171 (178)
                      ++...
T Consensus        89 WL~~~   93 (150)
T 2l5y_A           89 WLIEF   93 (150)
T ss_dssp             HHHHH
T ss_pred             HHHHc
Confidence            76653

>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A

Probab=93.35  E-value=0.2  Score=33.21  Aligned_cols=70  Identities=11%  Similarity=0.087  Sum_probs=49.0

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-----CHHHHHHHHHHHhc--CCCCcccHHHHHHHHHh
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-----ESLFADRVFDLFDT--KHNGILDFEEFARALSI  113 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-----~~~~~~~lf~~~d~--~~~g~i~~~ef~~~~~~  113 (178)
                      .+++.+++..++.+.++|++  +.|+|+..+|..++.....+     ++.  ..+ ..++.  ..++.|.|.+.+..+.+
T Consensus        36 ~l~~~dl~~F~~~W~~fDP~--aTg~I~~~~L~~ll~~L~pPLgi~kpnr--~~L-~~mniPl~~g~~Vhf~dvL~ALtr  110 (129)
T 2kav_A           36 PLSEDDFEMFYEVWEKFDPD--ATQFIEFAKLSDFADALDPPLLIAKPNK--VQL-IAMDLPMVSGDRIHCLDILFAFTK  110 (129)
T ss_dssp             SSCHHHHHHHHHHHHHHCTT--CCCEECGGGHHHHHHHSCTTSCCCTTCC--HHH-HHTCCCEETTTEEEHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhcCCC--CceEEeHHHHHHHHHhCCccccCCCccH--HHH-HHcCCccCCCCEEeHHHHHHHHHH
Confidence            48999999999999999999  99999999998887652211     111  112 23333  24467888888777765


Q ss_pred             hC
Q 030405          114 FH  115 (178)
Q Consensus       114 ~~  115 (178)
                      -.
T Consensus       111 ~v  112 (129)
T 2kav_A          111 RV  112 (129)
T ss_dssp             HT
T ss_pred             HH
Confidence            43

>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11

Probab=93.00  E-value=1.1  Score=30.42  Aligned_cols=68  Identities=18%  Similarity=0.245  Sum_probs=44.9

Q ss_pred             HHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-----CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           47 IEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-----KESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        47 i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-----~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ++.+...|..+-........|+-..|..++.....     ...-.+.-+|..+-..+...|+|++|...|..+
T Consensus        17 L~~~F~~F~~fG~~~~~~~~M~~~~f~Kl~kD~~lidgk~~T~tdvDiiF~KvK~k~~rkI~f~qF~~aL~~l   89 (151)
T 1wlm_A           17 LEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEEL   89 (151)
T ss_dssp             HHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcccCCcccccCCHHHHHHHHHHCCCCcCCCCChhhcceehheeccCccceecHHHHHHHHHHH
Confidence            44555555555221001136999999999865222     123457899999876667889999999988754

>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A

Probab=92.06  E-value=0.17  Score=31.19  Aligned_cols=58  Identities=9%  Similarity=0.048  Sum_probs=37.9

Q ss_pred             HHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           93 LFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        93 ~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .=|.|++|.|+-.++..+...+........ ........|.|++|.|+..|+..+=+-+
T Consensus        22 ~GDvNgDG~Vn~~D~~llk~yllg~~~~~~-~~~~~~aADvNgDG~In~~D~~~lkkyL   79 (88)
T 4fl4_A           22 MGDVNDDGKVNSTDLTLLKRYVLKAVSTLP-SSKAEKNADVNRDGRVNSSDVTILSRYL   79 (88)
T ss_dssp             TTCTTCSSCCSHHHHHHHHHHHHTSSCCCS-SHHHHHHHCTTCSSCCSHHHHHHHHHHH
T ss_pred             cccCCCCCcCCHHHHHHHHHHHcCCCCCCc-hhhhhhhccccCCCCcCHHHHHHHHHHH
Confidence            347788999999998776655443211110 0123557899999999999987654444

>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A

Probab=91.32  E-value=0.14  Score=33.88  Aligned_cols=28  Identities=18%  Similarity=0.222  Sum_probs=24.1

Q ss_pred             HHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405          124 IEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus       124 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ...+|..||.+++|+|...++..++..+
T Consensus        45 F~~~W~~fDP~aTg~I~~~~L~~ll~~L   72 (129)
T 2kav_A           45 FYEVWEKFDPDATQFIEFAKLSDFADAL   72 (129)
T ss_dssp             HHHHHHHHCTTCCCEECGGGHHHHHHHS
T ss_pred             HHHHHHhcCCCCceEEeHHHHHHHHHhC
Confidence            4567888999999999999999998876

>4dh2_B Dockerin type 1; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}

Probab=89.60  E-value=0.34  Score=29.42  Aligned_cols=57  Identities=9%  Similarity=0.091  Sum_probs=38.6

Q ss_pred             hcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           95 DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        95 d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      |.|++|.|+-.++..+...+......- ....-....|.|++|.|+..|+..+-+-++
T Consensus         9 DvN~DG~Vn~~D~~llk~yllg~~~~~-~~~~~~~~ADvngDG~In~~D~~~lk~yll   65 (82)
T 4dh2_B            9 DVNADGVVNISDYVLMKRYILRIIADF-PADDDMWVGDVNGDNVINDIDCNYLKRYLL   65 (82)
T ss_dssp             CTTCSSSCSHHHHHHHHHHHTTSSSSC-SSSCHHHHHCSSSSSCCSHHHHHHHHHHHT
T ss_pred             ccCCCCcCCHHHHHHHHHHHcCCCccC-ccccchhheeccCCCcCCHHHHHHHHHHHh
Confidence            668899999999888777665421100 001124577999999999999877655543

>3ul4_B Cellulosome enzyme, dockerin type I; cohesin, type I cohesin-dockerin COMP protein-protein interaction, cell adhesion; HET: PEG; 1.95A {Clostridium thermocellum}

Probab=89.41  E-value=0.49  Score=27.32  Aligned_cols=51  Identities=14%  Similarity=0.211  Sum_probs=35.3

Q ss_pred             hcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           95 DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        95 d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      |.|++|.|+-.++..+...+.......+   . ....|.|++|.|+..|+..+=+
T Consensus         7 DvN~DG~Vn~~D~~llk~yllg~~~~~~---~-~~~ADvn~DG~In~~D~~~lk~   57 (65)
T 3ul4_B            7 DLNRNGIVNDEDYILLKNYLLRGNKLVI---D-LNVADVNKDGKVNSTDCLFLKK   57 (65)
T ss_dssp             CTTCSSCCSHHHHHHHHHHHTTCSSCCC---C-GGGCCTTCSSCCSHHHHHHHHH
T ss_pred             cCCCCCcCCHHHHHHHHHHHCCCCCCch---H-HHhccccCCCCCCHHHHHHHHH
Confidence            5678888998888877666654221111   1 5677999999999999876543

>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}

Probab=89.33  E-value=0.35  Score=32.85  Aligned_cols=78  Identities=15%  Similarity=0.086  Sum_probs=45.2

Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIE  165 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~  165 (178)
                      .+..+++.+|.+.+|.|+..|-..++..-....+...+ ..   .|.. +|..|+.+|+...-..-   .-..+|.+++.
T Consensus        16 Ai~~lH~~lDdD~dG~Id~~Es~~flredl~~~d~~~~-~~---~fh~-~D~~Isv~eLw~~W~~s---~V~nWTvedV~   87 (150)
T 2k60_A           16 AVRNIHKLMDDDANGDVDVEESDEFLREDLNYHDPTVK-HS---TFHG-EDKLISVEDLWKAWKSS---EVYNWTVDEVV   87 (150)
T ss_dssp             HHHHHHHTTCTTCSSEECTTTTTTHHHHHTTSSCTHHH-HH---HHTS-SSCCEEHHHHHHHHHHS---HHHHCCHHHHH
T ss_pred             HHHHHHHhcCCCCCCcccHHHHHHHHHHHhccccchhh-hh---cccC-CCCeeeHHHHHHHhccC---ccccCCHHHHH
Confidence            34667777777777877777755555443322232222 22   3333 56788888877765431   11257777777


Q ss_pred             HHHHHH
Q 030405          166 SIIDKV  171 (178)
Q Consensus       166 ~~~~~~  171 (178)
                      +++...
T Consensus        88 ~WL~~~   93 (150)
T 2k60_A           88 QWLITY   93 (150)
T ss_dssp             HHHHHH
T ss_pred             HHHHHc
Confidence            777553

>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=89.30  E-value=2.4  Score=29.74  Aligned_cols=67  Identities=18%  Similarity=0.247  Sum_probs=44.3

Q ss_pred             HHHHHHHHHhhcccCCCC--CcccHHHHHHHHhcCCC-----CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 030405           47 IEALYELFKKISSAVIDD--GLINKEEFQLALFKTNK-----KESLFADRVFDLFDTKHNGILDFEEFARALSIFH  115 (178)
Q Consensus        47 i~~l~~~F~~~d~~~~~~--g~i~~~ef~~~l~~~~~-----~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~  115 (178)
                      ++.+...|..+-..  ..  ..|+-..|..++....+     ...-.+.-+|..+-..+...|+|++|..+|..+.
T Consensus        10 L~~~F~~F~~fG~~--~~~~~eMd~~~F~KlcKD~~liDgk~~T~tdvDIiF~KvK~k~~rkI~feqF~~aL~~lA   83 (184)
T 2jrf_A           10 LEESFRKFAIHGDP--KASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKALEELA   83 (184)
T ss_dssp             HHHHHHHHHSSSCT--TSTTSEEEHHHHHHHHHHTTCCCSSSSCHHHHHHHHHHHCCSCCSEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCC--CCccccCcHHHHHHHHHHcCCccCCCCChhhcchhhheeccCcceeecHHHHHHHHHHHH
Confidence            44455555544221  11  36999999998855221     1234578899998766678899999998886543

>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=88.49  E-value=4.9  Score=28.17  Aligned_cols=81  Identities=14%  Similarity=0.087  Sum_probs=58.5

Q ss_pred             HHHHHHHHHhcCCC-----CcccHHHHHHHHHh--hCC-CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCC
Q 030405           86 FADRVFDLFDTKHN-----GILDFEEFARALSI--FHP-NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGM  157 (178)
Q Consensus        86 ~~~~lf~~~d~~~~-----g~i~~~ef~~~~~~--~~~-~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~  157 (178)
                      .++.+|..|-.-++     ..|+-.+|..+|..  +.. .......+..+|..+-..+...|++++|..+|..+......
T Consensus         9 ~L~~~F~~F~~fG~~~~~~~eMd~~~F~KlcKD~~liDgk~~T~tdvDIiF~KvK~k~~rkI~feqF~~aL~~lA~kk~~   88 (184)
T 2jrf_A            9 GLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKALEELATKRFK   88 (184)
T ss_dssp             HHHHHHHHHHSSSCTTSTTSEEEHHHHHHHHHHTTCCCSSSSCHHHHHHHHHHHCCSCCSEEEHHHHHHHHHHHHHHHST
T ss_pred             HHHHHHHHHHhcCCCCCccccCcHHHHHHHHHHcCCccCCCCChhhcchhhheeccCcceeecHHHHHHHHHHHHHHhcC
Confidence            35777777766332     36999999998874  232 34556778899999966778889999999999988666544


Q ss_pred             CCCHHHHHH
Q 030405          158 NLSDDVIES  166 (178)
Q Consensus       158 ~l~~~~~~~  166 (178)
                      .++.+++.+
T Consensus        89 g~s~eE~~~   97 (184)
T 2jrf_A           89 GKSKEEAFD   97 (184)
T ss_dssp             TSCHHHHHH
T ss_pred             CCCHHHHHH
Confidence            577666433

>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A

Probab=87.85  E-value=0.72  Score=31.93  Aligned_cols=68  Identities=10%  Similarity=0.082  Sum_probs=50.0

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC----CCC-CHHHHHHHHHHHhc--CCCCcccHHHHHHHHHh
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT----NKK-ESLFADRVFDLFDT--KHNGILDFEEFARALSI  113 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~----~~~-~~~~~~~lf~~~d~--~~~g~i~~~ef~~~~~~  113 (178)
                      .+++..+......+..+|++  +.|+|...++..++...    +.. ++.   ..+..+|.  ..+|.|.|.+.+..+..
T Consensus        13 ~L~~~dl~~F~~~W~~fDP~--ATgfI~~~~L~~~l~~L~pPLg~~kPn~---~~L~~mdiPl~~~~~Vhf~dvL~ALtk   87 (168)
T 4dck_A           13 PLSEDDFDMFYEIWEKFDPE--ATQFIEYSVLSDFADALSEPLRIAKPNQ---ISLINMDLPMVSGDRIHCMDILFAFTK   87 (168)
T ss_dssp             CBCHHHHHHHHHHHHHHCTT--CCSEEEGGGHHHHHHHSCTTTCCCSSCH---HHHHHSCCEEETTTEEEHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhCCC--CcceeeHHHHHHHHHhcCCCCcCCCCCH---HHHHHcCCCcCCCCEEeHHHHHHHHHH
Confidence            58999999999999999999  99999999988887552    111 221   12334433  45678999998887764

>3ol3_A Putative uncharacterized protein; tuberculosis, RV0543C, ortholog, iodide ION S phasing, structural genomics; HET: PG4 PGE; 1.95A {Mycobacterium smegmatis} PDB: 3ol4_A

Probab=87.29  E-value=4.1  Score=25.89  Aligned_cols=68  Identities=10%  Similarity=0.174  Sum_probs=51.0

Q ss_pred             ccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCC--CceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHh
Q 030405          102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQ--GFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLS  173 (178)
Q Consensus       102 i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~--G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~  173 (178)
                      |.-.+|.-++..+.. ...++++..+-..+..++.  +.|+..|+..++..++   ....++++++.+..++-+
T Consensus        28 VP~~Dy~PLlALL~R-~Ltddev~~Va~~L~~~~~~~~pi~~~dI~~~It~vT---~~~P~~eDi~RV~arLaa   97 (107)
T 3ol3_A           28 VPPKDYFALLALLKR-SLTEDEVVRAAQAILRSTDGQSPVTDDDIRNAVHQII---EKEPTAEEINQVAARLAS   97 (107)
T ss_dssp             BCGGGHHHHHHHHTC-CCCHHHHHHHHHHHHHHCCSSSCBCHHHHHHHHHHHH---SSCCCHHHHHHHHHHHHT
T ss_pred             CCCCccHHHHHHhcc-cCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHh---cCCcCHHHHHHHHHHHHh
Confidence            777778887777777 5777777776666644333  3699999999998884   567889999988877644

>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A

Probab=86.55  E-value=2.8  Score=28.98  Aligned_cols=75  Identities=11%  Similarity=0.220  Sum_probs=48.7

Q ss_pred             CCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCC--CCCCcee
Q 030405           63 DDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDL--KQQGFIE  140 (178)
Q Consensus        63 ~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~--d~~G~I~  140 (178)
                      ....|+..+|..++            +++..||.+.+|.|.|.++..++..+...-.....-+..+..+|.  ..+|.|-
T Consensus        10 ~~~~L~~~dl~~F~------------~~W~~fDP~ATgfI~~~~L~~~l~~L~pPLg~~kPn~~~L~~mdiPl~~~~~Vh   77 (168)
T 4dck_A           10 STEPLSEDDFDMFY------------EIWEKFDPEATQFIEYSVLSDFADALSEPLRIAKPNQISLINMDLPMVSGDRIH   77 (168)
T ss_dssp             CSSCBCHHHHHHHH------------HHHHHHCTTCCSEEEGGGHHHHHHHSCTTTCCCSSCHHHHHHSCCEEETTTEEE
T ss_pred             cccCCCHHHHHHHH------------HHHHHhCCCCcceeeHHHHHHHHHhcCCCCcCCCCCHHHHHHcCCCcCCCCEEe
Confidence            33457777776544            789999999999999999999988765321110011222445554  4567788


Q ss_pred             HHHHHHHHH
Q 030405          141 RQEVKQMVV  149 (178)
Q Consensus       141 ~~e~~~~l~  149 (178)
                      .-++-..|.
T Consensus        78 f~dvL~ALt   86 (168)
T 4dck_A           78 CMDILFAFT   86 (168)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            777655554

>2ccl_B Endo-1,4-beta-xylanase Y; cell adhesion, cohesin/dockerin complex, cellulosome, cohesi dockerin, scaffolding, cellulose degradation; 2.03A {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1ohz_B

Probab=86.30  E-value=3.1  Score=23.54  Aligned_cols=54  Identities=11%  Similarity=0.113  Sum_probs=34.2

Q ss_pred             hcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           95 DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        95 d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      |.+++|.|+-.+|..+-..+.......   ..-....|.|++|.|+..++..+-+-+
T Consensus         6 DvN~DG~vn~~D~~~l~~yllg~~~~~---~~~~~~aDvn~DG~in~~D~~~l~~~l   59 (63)
T 2ccl_B            6 DVNGDGTINSTDLTMLKRSVLRAITLT---DDAKARADVDKNGSINAADVLLLSRYL   59 (63)
T ss_dssp             CTTCSSSCCHHHHHHHHHHHTTSSCCC---HHHHHHHCTTCSSCCSHHHHHHHHHHH
T ss_pred             ccCCCCcCCHHHHHHHHHHHcCCCccc---cchhhhhccCCCCCccHHHHHHHHHHH
Confidence            567788888888766655444322211   122466788889988888887654443

>2lky_A Uncharacterized protein; infectious disease, tuberculosis, DUF proteins, ssgcid, STRU genomics; NMR {Mycobacterium smegmatis str}

Probab=86.20  E-value=2.5  Score=27.05  Aligned_cols=83  Identities=7%  Similarity=0.087  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVI  164 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~  164 (178)
                      .++.++..-+-...-..|.-.+|.-++..+.. ..+++++..+-..+-.+  |.|+..|+..++..++   ....+++++
T Consensus         8 ~~l~siv~WLRAGYP~GVP~~Dy~PLLALL~r-~Ltdeev~~Va~~L~~~--~~i~~~dI~~~I~~vt---~~~Ps~eDI   81 (112)
T 2lky_A            8 AFLAKIAAWLNAGYPEGVPGPDRVPLLALLTR-RLTNDEIKAIAEDLEKR--AHFDHIDIGVLITQMT---DEMPREEDI   81 (112)
T ss_dssp             HHHHHHHHHHHHHCSSCCCHHHHHHHHHHHTT-TCCHHHHHHHHHHHHHH--CCCSCCCSHHHHHHHT---TCCCCHHHH
T ss_pred             HHHHHHHHHHHccCCCCCCCcchHHHHHHHcc-cCCHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHh---ccCCCHHHH
Confidence            34455544443322223888888888888876 67888888887777544  4699999999998883   556889999


Q ss_pred             HHHHHHHHh
Q 030405          165 ESIIDKVLS  173 (178)
Q Consensus       165 ~~~~~~~~~  173 (178)
                      ..+..++-+
T Consensus        82 ~RV~arLaa   90 (112)
T 2lky_A           82 ERVRRHLAL   90 (112)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHh
Confidence            988887654

>2vn6_B Endoglucanase A; cell adhesion, carbohydrate metabolism, polysaccharide degradation, hydrolase, glycosidase, cellulose degradation; 1.49A {Clostridium cellulolyticum} PDB: 2vn5_B

Probab=85.00  E-value=2.1  Score=24.41  Aligned_cols=51  Identities=12%  Similarity=0.098  Sum_probs=31.9

Q ss_pred             hcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           95 DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        95 d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      |.+++|.|+-.+|..+-..+.......+      ...|.|++|.|+..++..+-+-+
T Consensus         6 DvN~DG~vn~~D~~~l~~yllg~~~~~~------~~aDvn~DG~in~~D~~~l~~~l   56 (64)
T 2vn6_B            6 DYNNDGNVDSTDFAGLKKYIMAADHAYV------KNLDVNLDNEVNAFDLAILKKYL   56 (64)
T ss_dssp             CTTSSSCCSHHHHHHHHHHHHSTTCCCC------GGGCTTCSSCCSHHHHHHHHHHH
T ss_pred             cCCCCCcCCHHHHHHHHHHHccCCccch------hhhcccCCCcccHHHHHHHHHHH
Confidence            5577888888777655433322111111      56788999999988887655444

>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11

Probab=83.86  E-value=7.9  Score=26.18  Aligned_cols=80  Identities=13%  Similarity=0.119  Sum_probs=56.5

Q ss_pred             HHHHHHHHhcCCC-----CcccHHHHHHHHHh--hCC-CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCC
Q 030405           87 ADRVFDLFDTKHN-----GILDFEEFARALSI--FHP-NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN  158 (178)
Q Consensus        87 ~~~lf~~~d~~~~-----g~i~~~ef~~~~~~--~~~-~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~  158 (178)
                      ++.+|..|-.-++     ..|+-.+|..+|..  +.. .......+..+|..+-..+...|++++|..+|..+...-...
T Consensus        17 L~~~F~~F~~fG~~~~~~~~M~~~~f~Kl~kD~~lidgk~~T~tdvDiiF~KvK~k~~rkI~f~qF~~aL~~lA~kr~kg   96 (151)
T 1wlm_A           17 LEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEELATKRFKG   96 (151)
T ss_dssp             HHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHTHHHHSSS
T ss_pred             HHHHHHHHHhcccCCcccccCCHHHHHHHHHHCCCCcCCCCChhhcceehheeccCccceecHHHHHHHHHHHHHHHcCC
Confidence            5677777765322     35999999998874  222 345567788999998666788899999999999875552245


Q ss_pred             CCHHHHHH
Q 030405          159 LSDDVIES  166 (178)
Q Consensus       159 l~~~~~~~  166 (178)
                      ++.+++.+
T Consensus        97 ~~~~e~~~  104 (151)
T 1wlm_A           97 KSKEEAFD  104 (151)
T ss_dssp             CCHHHHHH
T ss_pred             CCHHHHHH
Confidence            77665433

>3te3_A Polycystic kidney disease 2-like 1 protein; trimeric coiled-coil, oligomerization domain, C-terminal CYT regulatory domain, metal transport; 2.69A {Homo sapiens}

Probab=83.60  E-value=1.4  Score=22.59  Aligned_cols=32  Identities=22%  Similarity=0.475  Sum_probs=25.5

Q ss_pred             CceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhccCC
Q 030405          137 GFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQLI  178 (178)
Q Consensus       137 G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~D~~  178 (178)
                      +.++.+||..+.+++.          +++..+..+++.+|+|
T Consensus         2 ~~Vs~eeF~~L~rRVl----------qlE~~l~gI~S~idav   33 (39)
T 3te3_A            2 GWVSGEEFYMLTRRVL----------QLETVLEGVVSQIDAV   33 (39)
T ss_dssp             CCCCHHHHHHHHHHHH----------HHHHHHHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHHHH----------HHHHHHHHHHHHHHHH
Confidence            5689999999988863          6777888888888764

>2y3n_B Cellulosomal family-48 processive glycoside hydro; structrual protein-hydrolase complex, cellulosome; 1.90A {Bacteroides cellulosolvens}

Probab=83.07  E-value=1.9  Score=25.20  Aligned_cols=51  Identities=14%  Similarity=0.244  Sum_probs=31.8

Q ss_pred             hcCCCCcccHHHHHHHHHhh--CCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           95 DTKHNGILDFEEFARALSIF--HPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        95 d~~~~g~i~~~ef~~~~~~~--~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      |.|++|.|+-.++..+-..+  .. ..+  ...   ...|.|++|.|+..|+..+-+.+
T Consensus         8 DvN~DG~vn~~D~~~l~~yl~~lg-~~~--~~~---~~aDvN~DG~in~~D~~~l~~~l   60 (71)
T 2y3n_B            8 DLNGDGVINMADVMILAQSFGKAI-GNP--GVN---EKADLNNDGVINSDDAIILAQYF   60 (71)
T ss_dssp             CTTSSSBCSHHHHHHHHHTTTCBC------------CTTCTTCSSBCSHHHHHHHHHHT
T ss_pred             cCCCCCcCCHHHHHHHHHHHHHhC-CCc--CCC---ccccccCCCcccHHHHHHHHHHH
Confidence            55778888888877665444  22 111  111   67788888988888887665444

>2kvc_A Putative uncharacterized protein; structural genomics, seattle structural genomi for infectious disease, ssgcid, unknown function; NMR {Mycobacterium tuberculosis}

Probab=82.41  E-value=2.7  Score=26.52  Aligned_cols=66  Identities=6%  Similarity=0.022  Sum_probs=52.0

Q ss_pred             ccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHh
Q 030405          102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLS  173 (178)
Q Consensus       102 i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~  173 (178)
                      |.-.+|.-++..+.. ..+++++..+-..+-.++  .|+..|+..++..+   +....+++++..+..++-+
T Consensus        23 VP~~Dy~PLlALL~r-~Ltdeev~~Va~~L~~~~--~i~~~dI~~~I~~v---t~~~Ps~eDI~RV~arLaa   88 (103)
T 2kvc_A           23 IPPTDSFAVLALLCR-RLSHDEVKAVANELMRLG--DFDQIDIGVVITHF---TDELPSPEDVERVRARLAA   88 (103)
T ss_dssp             CCHHHHHHHHHHHTT-TSCHHHHHHHHHHHHHHT--SSCSSCHHHHHHSC---CSSCSCHHHHHHHHHHHGG
T ss_pred             CCCcchHHHHHHHhc-cCCHHHHHHHHHHHHHcC--CCCHHHHHHHHHHH---hccCCCHHHHHHHHHHHHh
Confidence            888888888888876 678888888877775443  49999999998776   3556888999988877654

>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}

Probab=81.95  E-value=9.6  Score=25.75  Aligned_cols=60  Identities=18%  Similarity=0.246  Sum_probs=41.8

Q ss_pred             HHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           47 IEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        47 i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      .+.++..+..+|.+  .+|.|+..|-..+|.. ..........   ..+.. ++..|+.+|+-..+.
T Consensus        14 ~eAi~~~H~~lDdD--~dG~Id~~Es~~Flre~~~~~d~~~k~---~~~h~-~D~~Isv~eLw~~W~   74 (150)
T 2l5y_A           14 LEALQTIHKQMDDD--KDGGIEVEESDEFIREDMKYKDATNKH---SHLHR-EDKHITIEDLWKRWK   74 (150)
T ss_dssp             HHHHHHHHHHHSSS--CSSCBCHHHHHHHHHHHTTTTCSHHHH---HHHTT-TCCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCC--CCCCCcHHHHHHHHHHHhcccCchhHH---hhhcC-CCCeeeHHHHHHHHc
Confidence            46788888889999  9999999999888866 2222222112   23333 467899999988765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	178
d2zfda1	183	a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {	1e-28
d1fpwa_	190	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	1e-18
d1g8ia_	187	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	3e-18
d1xo5a_	180	a.39.1.5 (A:) Calcium- and integrin-binding protei	4e-18
d1s6ca_	178	a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera	1e-16
d1omra_	201	a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId:	2e-16
d1tuza_	118	a.39.1.7 (A:) Diacylglycerol kinase alpha, N-termi	1e-15
d1bjfa_	181	a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId	2e-15
d1jbaa_	189	a.39.1.5 (A:) Guanylate cyclase activating protein	6e-15
d1juoa_	172	a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId:	2e-08
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	3e-08
d1lkja_	146	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	1e-06
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	2e-06
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	4e-06
d1auib_	165	a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch	1e-05
d1e8aa_	87	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	2e-05
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	2e-05
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	2e-05
d2zkmx1	170	a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human	5e-05
d1qlsa_	95	a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa),	5e-05
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	6e-05
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	3e-04
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	6e-05
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	8e-05
d3cr5x1	90	a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru	9e-05
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	1e-04
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	0.003
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	1e-04
d1j55a_	94	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	2e-04
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	2e-04
d1a4pa_	92	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	3e-04
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	4e-04
d1cb1a_	78	a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax	9e-04
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	0.001
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	0.002
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	0.001
d3c1va1	93	a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa	0.001
d1psra_	100	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	0.001
d1zfsa1	93	a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no	0.001
d1ksoa_	93	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	0.001
d1yuta1	98	a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa	0.002
d1xk4c1	83	a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sa	0.002
d1jfja_	134	a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly	0.002
d1c07a_	95	a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId:	0.004
d2scpa_	174	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	0.004
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	0.004

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  102 bits (255), Expect = 1e-28
 Identities = 129/141 (91%), Positives = 132/141 (93%)

Query: 32  DPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF 91
           DPE LAR+TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF
Sbjct: 1   DPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF 60

Query: 92  DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT 151
           DLFDTKHNGIL FEEFARALS+FHPN+PIDDKI FSFQLYDLKQQGFIERQEVKQMVVAT
Sbjct: 61  DLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVAT 120

Query: 152 LTESGMNLSDDVIESIIDKVL 172
           L ESGMNL D VIE IIDK  
Sbjct: 121 LAESGMNLKDTVIEDIIDKTF 141

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 77.2 bits (189), Expect = 1e-18
 Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 7/147 (4%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFAD 88
           +D   L + T F   EI+  ++ F +        G + +E+F      F        FA+
Sbjct: 11  DDLTCLKQSTYFDRREIQQWHKGFLRDC----PSGQLAREDFVKIYKQFFPFGSPEDFAN 66

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
            +F +FD  +NG + FEEF   LS     +  ++K+ ++F+LYDL   G+I   E+  +V
Sbjct: 67  HLFTVFDKDNNGFIHFEEFITVLSTTSRGTL-EEKLSWAFELYDLNHDGYITFDEMLTIV 125

Query: 149 VATLTESGMNLSDDVIESIIDKVLSLI 175
            +     G  ++ +  E+  +  +  I
Sbjct: 126 ASVYKMMGSMVTLNEDEATPEMRVKKI 152

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 3e-18
 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 7/147 (4%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFAD 88
           E  E L R+T F+  E++  Y+ F K        G ++   FQ     F      + FA 
Sbjct: 8   EVVEELTRKTYFTEKEVQQWYKGFIKDCP----SGQLDAAGFQKIYKQFFPFGDPTKFAT 63

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
            VF++FD   +G ++F EF +ALS+      +D+K+ ++F+LYDL   G+I R E+  +V
Sbjct: 64  FVFNVFDENKDGRIEFSEFIQALSVTS-RGTLDEKLRWAFKLYDLDNDGYITRNEMLDIV 122

Query: 149 VATLTESGMNLSDDVIESIIDKVLSLI 175
            A     G  +     E+  +K +  I
Sbjct: 123 DAIYQMVGNTVELPEEENTPEKRVDRI 149

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.2 bits (184), Expect = 4e-18
 Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 5/144 (3%)

Query: 34  EALARETVFSVSEIEALYELFKKISSAV---IDDGLINKEEFQLALFKTNKKESLFADRV 90
                 T  +  EI   +  F ++       ++  L  +  F+  L     K + F +R+
Sbjct: 3   AEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERI 62

Query: 91  FDLFDT-KHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV 149
             +F T      L FE+F   LS+F   +  D K  ++F+++D    G + R+++ ++V 
Sbjct: 63  CRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVN 122

Query: 150 ATLTES-GMNLSDDVIESIIDKVL 172
               E     LS   ++ +ID +L
Sbjct: 123 CLTGEGEDTRLSASEMKQLIDNIL 146

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 71.8 bits (175), Expect = 1e-16
 Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 11/145 (7%)

Query: 34  EALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVF 91
           E L  +T F+  E++ LY  FK         G++N+E F+   A F  +   S +A  +F
Sbjct: 2   EQLEAQTNFTKRELQVLYRGFKNECP----SGVVNEETFKQIYAQFFPHGDASTYAHYLF 57

Query: 92  DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT 151
           + FDT   G + FE+F  ALSI    +   +K+ ++F LYD+ + G+I ++E+  +V A 
Sbjct: 58  NAFDTTQTGSVKFEDFVTALSILLRGTV-HEKLRWTFNLYDINKDGYINKEEMMDIVKAI 116

Query: 152 LTESG----MNLSDDVIESIIDKVL 172
               G      L +D     +D   
Sbjct: 117 YDMMGKYTYPVLKEDTPRQHVDVFF 141

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 71.0 bits (173), Expect = 2e-16
 Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 7/137 (5%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEF--QLALFKTNKKESLFAD 88
           E  E L   T F+  E+ + Y+ F K        G I ++EF    + F        +A 
Sbjct: 11  EILEELQLNTKFTEEELSSWYQSFLKECP----SGRITRQEFQTIYSKFFPEADPKAYAQ 66

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
            VF  FD   +G LDF+E+  AL +       + K+E++F LYD+   G I + EV ++V
Sbjct: 67  HVFRSFDANSDGTLDFKEYVIALHMTSAGKT-NQKLEWAFSLYDVDGNGTISKNEVLEIV 125

Query: 149 VATLTESGMNLSDDVIE 165
            A         +  + E
Sbjct: 126 TAIFKMISPEDTKHLPE 142

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.3 bits (164), Expect = 1e-15
 Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 13/109 (11%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVID-DGLINKEEFQLAL---FKTNKKESLF 86
            D   L +   +S  ++  + +LF+    A       I  E FQ  L    + +      
Sbjct: 11  SDFAQLQKYMEYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHL 70

Query: 87  ADRVFDLFDTKH--------NGILDFEEFARALSIFHPNSPIDDKIEFS 127
           +  +F  F+T H          ++   + +   S+     P +DK+E+S
Sbjct: 71  SLALFQSFETGHCLNETNVTKDVVCLNDVSCYFSLLEGGRP-EDKLEWS 118

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 68.3 bits (166), Expect = 2e-15
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 7/147 (4%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFAD 88
           E  + L   T F+  EI+  Y+ F +        G ++ EEF+     F      S FA+
Sbjct: 7   EVMQDLLESTDFTEHEIQEWYKGFLRDCP----SGHLSMEEFKKIYGNFFPYGDASKFAE 62

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
            VF  FD   +G +DF EF  ALS+       + K++++F +YDL   G+I + E+ ++V
Sbjct: 63  HVFRTFDANGDGTIDFREFIIALSVTSRGKL-EQKLKWAFSMYDLDGNGYISKAEMLEIV 121

Query: 149 VATLTESGMNLSDDVIESIIDKVLSLI 175
            A        +     ES  +K    I
Sbjct: 122 QAIYKMVSSVMKMPEDESTPEKRTEKI 148

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 67.2 bits (163), Expect = 6e-15
 Identities = 28/144 (19%), Positives = 61/144 (42%), Gaps = 6/144 (4%)

Query: 31  EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL-FKTNKKESLFADR 89
           E+ E          ++++  Y+ F +        G +   EF+       N++ + + + 
Sbjct: 7   EEAEENGAVGAADAAQLQEWYKKFLEEC----PSGTLFMHEFKRFFKVPDNEEATQYVEA 62

Query: 90  VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV 149
           +F  FDT  +  +DF E+  AL        ++ K++++F++YD  + G I+RQE+  +V 
Sbjct: 63  MFRAFDTNGDNTIDFLEYVAAL-NLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVE 121

Query: 150 ATLTESGMNLSDDVIESIIDKVLS 173
           +          +   E     +  
Sbjct: 122 SIYKLKKACSVEVEAEQQGKLLTP 145

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 2e-08
 Identities = 28/136 (20%), Positives = 49/136 (36%), Gaps = 20/136 (14%)

Query: 42  FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRV----FDLFD 95
           F     + LY  F  ++     DG I+ +E Q  L +         F          + D
Sbjct: 1   FPGQTQDPLYGYFAAVAG---QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLD 57

Query: 96  TKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTES 155
              +G + F EF    ++ +            F  +D  + G ++ QE+++     LT  
Sbjct: 58  RDMSGTMGFNEFKELWAVLNGW-------RQHFISFDTDRSGTVDPQELQKA----LTTM 106

Query: 156 GMNLSDDVIESIIDKV 171
           G  LS   + SI  + 
Sbjct: 107 GFRLSPQAVNSIAKRY 122

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (115), Expect = 3e-08
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 20/129 (15%)

Query: 49  ALYELFKKISSAVIDDGLINKEEFQLALFKT--NKKESLFADR----VFDLFDTKHNGIL 102
           ++Y  F  ++     DG ++ EE Q  L ++  N   S F+      +  + D  H G +
Sbjct: 1   SVYTYFSAVAG---QDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKM 57

Query: 103 DFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDD 162
            F         F       +  + +F   D    G +E  E++Q     +   G  LS  
Sbjct: 58  GFNA-------FKELWAALNAWKENFMTVDQDGSGTVEHHELRQA----IGLMGYRLSPQ 106

Query: 163 VIESIIDKV 171
            + +I+ + 
Sbjct: 107 TLTTIVKRY 115

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.1 bits (103), Expect = 1e-06
 Identities = 25/131 (19%), Positives = 54/131 (41%), Gaps = 7/131 (5%)

Query: 42  FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES-LFADRVFDLFDTKHNG 100
            +  +I    E F        ++G I+  E    +       S    + + +  D   N 
Sbjct: 4   LTEEQIAEFKEAFALFDKD--NNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNH 61

Query: 101 ILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLS 160
            ++F EF   +S    ++  + ++  +F+++D    G I   E+K +    LT  G  L+
Sbjct: 62  QIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHV----LTSIGEKLT 117

Query: 161 DDVIESIIDKV 171
           D  ++ ++ +V
Sbjct: 118 DAEVDDMLREV 128

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 43.9 bits (103), Expect = 2e-06
 Identities = 32/145 (22%), Positives = 51/145 (35%), Gaps = 24/145 (16%)

Query: 36  LARETVFSVSEI-EALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDL- 93
           L  E V S  EI +    LF K++    DD  I+ +E Q  L +   K        F L 
Sbjct: 7   LPDEKVLSEEEIDDNFKTLFSKLAG---DDMEISVKELQTILNRIISKHKDLRTNGFSLE 63

Query: 94  --------FDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 145
                    D   NG L   EF    +               F+ +DL + G +   E++
Sbjct: 64  SCRSMVNLMDRDGNGKLGLVEFNILWNRIRN-------YLTIFRKFDLDKSGSMSAYEMR 116

Query: 146 QMVVATLTESGMNLSDDVIESIIDK 170
                 +  +G  L   + + I+ +
Sbjct: 117 MA----IEAAGFKLPCQLHQVIVAR 137

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 42.6 bits (99), Expect = 4e-06
 Identities = 25/131 (19%), Positives = 53/131 (40%), Gaps = 7/131 (5%)

Query: 42  FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES-LFADRVFDLFDTKHNG 100
            +  +I    E F         DG I  +E    +    +  +      + +  D   NG
Sbjct: 3   LTEEQIAEFKEAFALFDKD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60

Query: 101 ILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLS 160
            +DF EF   ++        ++++  +F+++D    G I   E++ +    +T  G  L+
Sbjct: 61  TIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHV----MTNLGEKLT 116

Query: 161 DDVIESIIDKV 171
           DD ++ +I + 
Sbjct: 117 DDEVDEMIREA 127

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (95), Expect = 1e-05
 Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 8/135 (5%)

Query: 36  LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFD 95
           L   + F   EI+ L + FKK+   + + G ++ EEF         +++    RV D+FD
Sbjct: 4   LEMCSHFDADEIKRLGKRFKKLD--LDNSGSLSVEEFM---SLPELQQNPLVQRVIDIFD 58

Query: 96  TKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTES 155
           T  NG +DF+EF   +S F      + K+ F+F++YD+ + G+I   E+ Q++       
Sbjct: 59  TDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM---V 115

Query: 156 GMNLSDDVIESIIDK 170
           G NL D  ++ I+DK
Sbjct: 116 GNNLKDTQLQQIVDK 130

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

 Score = 39.0 bits (91), Expect = 2e-05
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 6/69 (8%)

Query: 45  SEIEALYELFKKISSAVIDDGLINKEEFQ------LALFKTNKKESLFADRVFDLFDTKH 98
             +E +  +F + S        ++K E +      LA    N K+    D +F   D   
Sbjct: 5   EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQ 64

Query: 99  NGILDFEEF 107
           +  +DF+EF
Sbjct: 65  DEQVDFQEF 73

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 39.6 bits (92), Expect = 2e-05
 Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 3/96 (3%)

Query: 55  KKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF 114
            K  SA  D G  + + F   L     K       VF++ D   +G ++ EE    L  F
Sbjct: 12  NKAISAFKDPGTFDYKRF-FHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGF 70

Query: 115 HPN--SPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
             +     D + +      D    G I   E  +MV
Sbjct: 71  SAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMV 106

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 39.6 bits (92), Expect = 2e-05
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 3/96 (3%)

Query: 55  KKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF 114
           KK   A       + ++F   +    KK +    +VF + D   +G ++ +E    L  F
Sbjct: 12  KKAIGAFTAADSFDHKKF-FQMVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGF 70

Query: 115 HPNSP--IDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
             ++      + +      D    G I  +E   +V
Sbjct: 71  SSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLV 106

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 5e-05
 Identities = 18/131 (13%), Positives = 43/131 (32%), Gaps = 13/131 (9%)

Query: 50  LYELFKKISSAVIDDGLINKEEFQLALFKTNKKES---LFADRVFDLFDTKHNGILDFEE 106
           L ++  K+   +  +G I  + F        K+               D  +        
Sbjct: 7   LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPV 66

Query: 107 FARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN------LS 160
           +      F  +     +I+  F  Y  K + ++ ++ + + +     +S +N        
Sbjct: 67  YK----SFLMSLCPRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPAR 122

Query: 161 DDVIESIIDKV 171
            D ++ +IDK 
Sbjct: 123 PDQVQGLIDKY 133

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

 Score = 38.2 bits (89), Expect = 5e-05
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 6/67 (8%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
           IE+L  +F+K +    ++  I+K EF      +LA F  N+K+    DR+    D   +G
Sbjct: 8   IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDG 67

Query: 101 ILDFEEF 107
            LDF+EF
Sbjct: 68  QLDFQEF 74

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.6 bits (87), Expect = 6e-05
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 87  ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 146
           A RVF+ FD   +G L  +EF      F P    +D ++F F+  D+   G +   E   
Sbjct: 3   AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKF-FEEIDVDGNGELNADEFTS 61

Query: 147 MV 148
            +
Sbjct: 62  CI 63

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 35.7 bits (82), Expect = 3e-04
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 64  DGLINKEEFQLALFKTNKKES-LFADRVFDLFDTKHNGILDFEEFARALS 112
           DG ++ +EF+      +   +     + F+  D   NG L+ +EF   + 
Sbjct: 15  DGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.4 bits (89), Expect = 6e-05
 Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 3/96 (3%)

Query: 55  KKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF 114
                   D      ++F       +K  +     +F   D   +G LD +E    L  F
Sbjct: 12  AAALQECQDPDTFEPQKF-FQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKF 70

Query: 115 HPNSPIDDKIEFS--FQLYDLKQQGFIERQEVKQMV 148
             ++    + E        D    G I   E ++MV
Sbjct: 71  QSDARELTESETKSLMDAADNDGDGKIGADEFQEMV 106

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 38.0 bits (88), Expect = 8e-05
 Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 3/96 (3%)

Query: 55  KKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF 114
           KK   AV  +G  N ++F  AL       +    +VF   D   +G ++ EE    L  F
Sbjct: 12  KKALDAVKAEGSFNHKKF-FALVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSF 70

Query: 115 HPN--SPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
             +     D + +   +  D    G I   E + +V
Sbjct: 71  AADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLV 106

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

 Score = 37.4 bits (87), Expect = 9e-05
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
           + AL ++F + S    D   + K E       +L+ F    KE    D+V +  D+  +G
Sbjct: 8   VVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDG 67

Query: 101 ILDFEEF 107
             DF+EF
Sbjct: 68  ECDFQEF 74

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 37.2 bits (86), Expect = 1e-04
 Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 46  EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFE 105
           +I     +FK+  +    DG I+  E   AL            R+    DT  +G + F+
Sbjct: 4   DIADRERIFKRFDTN--GDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFD 61

Query: 106 EFARAL 111
           EF    
Sbjct: 62  EFTDFA 67

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 33.0 bits (75), Expect = 0.003
 Identities = 17/62 (27%), Positives = 22/62 (35%), Gaps = 2/62 (3%)

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
           R+F  FDT  +G +   E   AL      S   D++       D    GFI   E     
Sbjct: 10  RIFKRFDTNGDGKISSSELGDALKTLG--SVTPDEVRRMMAEIDTDGDGFISFDEFTDFA 67

Query: 149 VA 150
            A
Sbjct: 68  RA 69

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 38.4 bits (88), Expect = 1e-04
 Identities = 27/146 (18%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 30  LEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFAD 88
           + D +A AR    S   I      F          G I+ +E    +    +       D
Sbjct: 3   MTDQQAEARAF-LSEEMIAEFKAAFDMF--DADGGGDISTKELGTVMRMLGQNPTKEELD 59

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSP---IDDKIEFSFQLYDLKQQGFIERQEVK 145
            + +  D   +G +DFEEF   +            ++++   F+++D    GFI+ +E+ 
Sbjct: 60  AIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELG 119

Query: 146 QMVVATLTESGMNLSDDVIESIIDKV 171
           +++      +G +++++ IE ++   
Sbjct: 120 EIL----RATGEHVTEEDIEDLMKDS 141

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} Length = 94

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 2e-04
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 6/67 (8%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEFQ------LALFKTNKKESLFADRVFDLFDTKHNG 100
           +  + ++F + S +      + K E +      L  F  + K+    D++    D   + 
Sbjct: 8   MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDA 67

Query: 101 ILDFEEF 107
            +DF EF
Sbjct: 68  QVDFSEF 74

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 36.4 bits (84), Expect = 2e-04
 Identities = 15/60 (25%), Positives = 28/60 (46%)

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
           R F +FD   +G++DF+EF   +         D ++E + +  D    G I+  E   ++
Sbjct: 6   RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 65

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

 Score = 36.5 bits (84), Expect = 3e-04
 Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 9/74 (12%)

Query: 45  SEIEALYELFKKISSAVIDDGLINKEEFQLAL------FKTNKKESLFADRVFDLFDTKH 98
             +E +   F K +    D G + KE+ ++ +      F  N+K+ L  D++    D   
Sbjct: 6   HAMETMMFTFHKFAG---DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCR 62

Query: 99  NGILDFEEFARALS 112
           +G + F+ F   ++
Sbjct: 63  DGKVGFQSFFSLIA 76

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 36.1 bits (83), Expect = 4e-04
 Identities = 19/98 (19%), Positives = 30/98 (30%), Gaps = 3/98 (3%)

Query: 55  KKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF 114
               +A         +EF  A      K      + F + D   +G ++ +E    L  F
Sbjct: 11  AAALAACSAADSFKHKEF-FAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNF 69

Query: 115 HPNSPIDDKIEFS--FQLYDLKQQGFIERQEVKQMVVA 150
            P++      E        D    G I   E   M+ A
Sbjct: 70  SPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIKA 107

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 34.4 bits (79), Expect = 9e-04
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 43  SVSEIEALYELFKKISSAVIDDGLINKEEFQLAL---FKTNKKESLFADRVFDLFDTKHN 99
           +      L  +F+K ++   D   ++KEE +  +   F +  K     D +F   D   +
Sbjct: 2   AQKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGD 61

Query: 100 GILDFEEFAR 109
           G + FEEF  
Sbjct: 62  GEVSFEEFQV 71

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 34.5 bits (79), Expect = 0.001
 Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
           + F LFD  ++G +  ++  R       N   ++  E      D      I+  E  +++
Sbjct: 13  KAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEM-IAEADRNDDNEIDEDEFIRIM 71

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 33.3 bits (76), Expect = 0.002
 Identities = 9/66 (13%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 48  EALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL-FADRVFDLFDTKHNGILDFEE 106
           E + + F+       + G I  ++ +    +  +  +      +    D   +  +D +E
Sbjct: 9   EEILKAFRLFDDD--NSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 66

Query: 107 FARALS 112
           F R + 
Sbjct: 67  FIRIMK 72

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 36.1 bits (82), Expect = 0.001
 Identities = 14/61 (22%), Positives = 23/61 (37%)

Query: 89  RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 148
            ++   D   +G L  EE  + L   H       K E  F + D+     +  QE   +V
Sbjct: 257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLV 316

Query: 149 V 149
           +
Sbjct: 317 L 317

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

 Score = 34.5 bits (79), Expect = 0.001
 Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 45  SEIEALYELFKKISSAVIDDGLINKEEFQLAL------FKTNKKESLFADRVFDLFDTKH 98
             ++ +   F K S    D   +NK E +  L      F   + +     ++    D+  
Sbjct: 6   KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNR 65

Query: 99  NGILDFEEFARALS 112
           +  +DF+E+   LS
Sbjct: 66  DNEVDFQEYCVFLS 79

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

 Score = 34.6 bits (79), Expect = 0.001
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 11/71 (15%)

Query: 45  SEIEALYELFKKISSAVIDDGLINKEEFQLALFK--------TNKKESLFADRVFDLFDT 96
             I  + ++F K +     D  I+K      + +         +KK + +   VF+  D 
Sbjct: 7   RSIIGMIDMFHKYTR---RDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDK 63

Query: 97  KHNGILDFEEF 107
             +  +DF EF
Sbjct: 64  NEDKKIDFSEF 74

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

 Score = 34.5 bits (79), Expect = 0.001
 Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 6/74 (8%)

Query: 45  SEIEALYELFKKISSAVIDDGLINKEEFQ------LALFKTNKKESLFADRVFDLFDTKH 98
           + +E L  +F   S    D   ++K+E +      L+ F   +K++   D++    D   
Sbjct: 6   TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENG 65

Query: 99  NGILDFEEFARALS 112
           +G +DF+EF   ++
Sbjct: 66  DGEVDFQEFVVLVA 79

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 0.001
 Identities = 12/74 (16%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 45  SEIEALYELFKKISSAVIDDGLINKEEFQLAL------FKTNKKESLFADRVFDLFDTKH 98
             + A+   F++ +    D   + + E +  L      +   +      ++   + DT  
Sbjct: 6   QAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNK 65

Query: 99  NGILDFEEFARALS 112
           +  +DF E+ R+L+
Sbjct: 66  DCEVDFVEYVRSLA 79

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

 Score = 34.1 bits (78), Expect = 0.002
 Identities = 12/71 (16%), Positives = 23/71 (32%), Gaps = 3/71 (4%)

Query: 45  SEIEALYELFKKISSAVIDDGLINKEEFQLALFK---TNKKESLFADRVFDLFDTKHNGI 101
             IE +   F   +        ++  EF+  + +      K+    D      D   +  
Sbjct: 11  ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSE 70

Query: 102 LDFEEFARALS 112
           L F E+ R + 
Sbjct: 71  LKFNEYWRLIG 81

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 7/68 (10%)

Query: 47  IEALYELFKKISSAVIDDGLINKEEFQLAL-------FKTNKKESLFADRVFDLFDTKHN 99
           IE +   F + S  +     +N+ EF+  +        K   K     + + +  DT  +
Sbjct: 9   IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNAD 68

Query: 100 GILDFEEF 107
             L FEEF
Sbjct: 69  KQLSFEEF 76

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

 Score = 34.3 bits (77), Expect = 0.002
 Identities = 7/43 (16%), Positives = 13/43 (30%)

Query: 87  ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQ 129
           A+ +F   D   +G + +EE    +S                 
Sbjct: 2   AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKS 44

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (75), Expect = 0.004
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 41  VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNG 100
           V S +E     E+F K       DG ++  E +    KT    +L    ++ L DTK  G
Sbjct: 3   VVSPAEKAKYDEIFLKTDKD--MDGFVSGLEVREIFLKTGLPSTLL-AHIWSLCDTKDCG 59

Query: 101 ILDFEEFARAL 111
            L  ++FA A 
Sbjct: 60  KLSKDQFALAF 70

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

 Score = 34.3 bits (77), Expect = 0.004
 Identities = 17/119 (14%), Positives = 34/119 (28%), Gaps = 18/119 (15%)

Query: 46  EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRV------------FDL 93
            ++ +   F +I      DG I + +F+    +  K+  + A+                L
Sbjct: 4   WVQKMKTYFNRIDFD--KDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFL 61

Query: 94  FDTKHNGILDFEEFARALSIFHPNSPIDD----KIEFSFQLYDLKQQGFIERQEVKQMV 148
                   +D   F  ++     N          +   F+  D  +   I R E     
Sbjct: 62  TAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 32.6 bits (74), Expect = 0.004
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 3/75 (4%)

Query: 39  ETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES-LFADRVFDLFDTK 97
               S   I      F    +     G I+ +E    +    +  +    D + +  D  
Sbjct: 5   RAFLSEEMIAEFKAAFDMFDAD--GGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED 62

Query: 98  HNGILDFEEFARALS 112
            +G +DFEEF   + 
Sbjct: 63  GSGTIDFEEFLVMMV 77

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	178
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	99.91
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	99.89
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	99.86
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	99.85
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	99.83
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	99.83
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	99.82
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	99.82
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.81
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.81
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	99.81
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	99.79
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	99.78
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	99.76
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	99.73
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.68
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.68
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.68
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	99.66
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	99.64
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	99.63
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	99.61
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	99.59
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	99.57
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	99.56
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	99.53
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	99.53
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	99.53
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	99.52
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.51
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	99.5
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.5
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	99.48
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	99.48
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	99.48
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	99.47
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	99.47
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	99.44
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	99.44
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	99.43
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	99.43
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	99.43
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.43
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	99.42
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.42
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.42
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.41
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	99.41
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.4
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	99.4
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	99.4
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	99.39
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	99.39
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	99.39
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	99.39
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.38
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	99.38
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	99.38
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	99.36
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	99.36
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	99.35
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	99.35
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	99.35
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	99.35
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	99.34
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	99.34
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.34
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	99.33
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	99.33
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	99.32
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	99.3
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	99.3
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	99.3
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.3
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	99.29
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	99.29
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.28
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	99.26
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.25
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	99.25
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	99.24
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	99.24
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.24
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.22
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	99.2
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	99.2
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	99.2
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	99.17
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.17
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.15
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.14
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	99.12
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	99.11
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	99.1
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	99.1
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	99.1
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.1
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.09
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.08
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	99.08
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.07
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	99.07
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	99.07
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	99.06
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	99.06
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	99.05
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.04
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	99.04
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	99.03
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	99.02
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	98.99
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	98.95
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	98.94
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.94
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	98.93
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	98.93
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.93
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	98.89
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	98.89
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	98.89
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	98.88
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	98.84
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	98.83
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	98.83
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	98.83
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	98.82
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	98.81
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.8
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	98.8
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	98.76
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.75
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	98.71
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.69
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	98.68
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	98.68
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	98.67
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	98.61
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.61
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.61
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	98.59
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	98.58
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	98.56
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	98.55
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.54
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	98.46
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	98.45
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	98.4
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	98.37
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	98.37
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	98.37
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.36
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	98.32
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.28
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	98.26
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	97.88
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	97.63
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	97.62
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	97.61
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	97.54
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	97.36
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.24
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	96.08
d1eg3a1	125	Dystrophin {Human (Homo sapiens) [TaxId: 9606]}	95.83
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	95.27
d2cclb1	59	Endo-1,4-beta-xylanase Y {Clostridium thermocellum	95.05
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	93.2
d1pula1	103	Hypothetical protein c32e8.3 {Caenorhabditis elega	91.96
d1h8ba_	73	alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}	90.28
d1j7qa_	86	Calcium vector protein {Amphioxus (Branchiostoma l	90.06
d1dava_	71	Cellulosome endoglucanase SS {Clostridium thermoce	88.57
d1wlma1	138	Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090	85.7
d1wlma1	138	Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090	84.05

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.91  E-value=7.4e-23  Score=145.60  Aligned_cols=145  Identities=88%  Similarity=1.237  Sum_probs=130.8

Q ss_pred             HHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           33 PEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        33 ~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      ++.+...+.||++++..|++.|..+|.+..++|.|+..+|..++...+...++.++++|+.+|.+++|.|+|+||+.++.
T Consensus         2 ~~~l~~~t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~dg~I~f~EFl~~l~   81 (183)
T d2zfda1           2 PELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALS   81 (183)
T ss_dssp             THHHHHHSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHH
T ss_pred             HHHHhhhCCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCCCHHHHHHHHHHccCCCCcCcHHHHHHHHH
Confidence            45688899999999999999999998764468999999999998776666667789999999999999999999999998


Q ss_pred             hhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhccC
Q 030405          113 IFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQL  177 (178)
Q Consensus       113 ~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~D~  177 (178)
                      .+......++.++.+|+.||.|++|.|+.+|+..++..++...+..+++.+++.+++.+|.++|.
T Consensus        82 ~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~  146 (183)
T d2zfda1          82 VFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADT  146 (183)
T ss_dssp             HTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCS
T ss_pred             hhhccCcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCC
Confidence            88765677889999999999999999999999999999888888889999999999999999884

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=1.6e-22  Score=144.71  Aligned_cols=152  Identities=26%  Similarity=0.463  Sum_probs=130.2

Q ss_pred             hcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--CCCCHHHHHHHHHH
Q 030405           16 VNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--NKKESLFADRVFDL   93 (178)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~~~~~~~~~~lf~~   93 (178)
                      ||+..|++++     +.+..+.+.++|++.+|+.|++.|...+    ++|.++..+|..++...  .......++++|+.
T Consensus         1 MG~~~S~l~~-----e~l~~l~~~t~fs~~Ei~~l~~~F~~~~----~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~   71 (190)
T d1fpwa_           1 MGAKTSKLSK-----DDLTCLKQSTYFDRREIQQWHKGFLRDC----PSGQLAREDFVKIYKQFFPFGSPEDFANHLFTV   71 (190)
T ss_dssp             CCCCSCCSTT-----HHHHHHTTTCCSTHHHHHHHHHHHHHHC----TTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHT
T ss_pred             CCCccCCCCH-----HHHHHHHHHcCCCHHHHHHHHHHHHHHC----CCCCccHHHHHHHHHHHCCCCChHHHHHHHHHH
Confidence            7888888888     9999999999999999999999997766    67999999999987652  34455678999999


Q ss_pred             HhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcC----CCCCHHHHHHHHH
Q 030405           94 FDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG----MNLSDDVIESIID  169 (178)
Q Consensus        94 ~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~----~~l~~~~~~~~~~  169 (178)
                      +|.+++|.|+|.||+.++..+.. ...+++++.+|+.||.|++|.|+.+|+..++..+....+    ...++...+..++
T Consensus        72 ~D~~~~G~I~~~Ef~~~~~~~~~-~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  150 (190)
T d1fpwa_          72 FDKDNNGFIHFEEFITVLSTTSR-GTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVK  150 (190)
T ss_dssp             CCSSCSSEECHHHHHHHHHHHSC-CCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHH
T ss_pred             hCcCCCCcccHHHHHHHHHHHcc-CchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHH
Confidence            99999999999999999998886 678899999999999999999999999999998865433    2334445667788


Q ss_pred             HHHhhccC
Q 030405          170 KVLSLIQL  177 (178)
Q Consensus       170 ~~~~~~D~  177 (178)
                      .+|.++|.
T Consensus       151 ~if~~~D~  158 (190)
T d1fpwa_         151 KIFKLMDK  158 (190)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhCC
Confidence            88888874

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4e-21  Score=136.93  Aligned_cols=148  Identities=29%  Similarity=0.523  Sum_probs=124.9

Q ss_pred             CccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--CCCCHHHHHHHHHHHhcC
Q 030405           20 DADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--NKKESLFADRVFDLFDTK   97 (178)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~~~~~~~~~~lf~~~d~~   97 (178)
                      +++++|     +.+..+.+.+.|+..++..|+..|...+    ++|.++..+|..++...  .......++++|+.+|.+
T Consensus         2 nskl~~-----e~i~~l~~~t~fs~~Ei~~l~~~F~~~~----~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~   72 (187)
T d1g8ia_           2 NSKLKP-----EVVEELTRKTYFTEKEVQQWYKGFIKDC----PSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDEN   72 (187)
T ss_dssp             CCSCCH-----HHHHHHHHTSSSCHHHHHHHHHHHHHHC----TTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTT
T ss_pred             CccCCH-----HHHHHHHHhcCCCHHHHHHHHHHHHHHC----CCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcC
Confidence            566777     8999999999999999999999998776    67999999999987662  233456778999999999


Q ss_pred             CCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcC----CCCCHHHHHHHHHHHHh
Q 030405           98 HNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG----MNLSDDVIESIIDKVLS  173 (178)
Q Consensus        98 ~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~----~~l~~~~~~~~~~~~~~  173 (178)
                      ++|.|+|+||+.++..+.. ...+++++.+|+.||.|++|.|+.+|+..++..++...+    .+.++...++.++.+|.
T Consensus        73 ~dg~I~~~EF~~~l~~~~~-~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~  151 (187)
T d1g8ia_          73 KDGRIEFSEFIQALSVTSR-GTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFA  151 (187)
T ss_dssp             CSSEEEHHHHHHHHHHHHH-CCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHhcc-CchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHH
Confidence            9999999999999988876 678899999999999999999999999999998766443    23344556678888998


Q ss_pred             hccC
Q 030405          174 LIQL  177 (178)
Q Consensus       174 ~~D~  177 (178)
                      ++|.
T Consensus       152 ~~D~  155 (187)
T d1g8ia_         152 MMDK  155 (187)
T ss_dssp             HHCS
T ss_pred             HhCC
Confidence            8874

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.85  E-value=3.2e-20  Score=131.39  Aligned_cols=148  Identities=28%  Similarity=0.448  Sum_probs=123.6

Q ss_pred             CccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--CCCHHHHHHHHHHHhcC
Q 030405           20 DADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--KKESLFADRVFDLFDTK   97 (178)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~~~~~~~~~lf~~~d~~   97 (178)
                      +++++|     +.+.++.+.++||..+++.++..|...+    ++|.|+..+|..++....  ...+..++++|+.++.+
T Consensus         1 ~s~l~~-----~~~~~L~~~t~fs~~ei~~l~~~F~~~~----~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~   71 (181)
T d1bjfa_           1 NSKLRP-----EVMQDLLESTDFTEHEIQEWYKGFLRDC----PSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDAN   71 (181)
T ss_dssp             CCCCCH-----HHHHHHHHHSSCCHHHHHHHHHHHHHHS----TTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSS
T ss_pred             CCCCCH-----HHHHHHHHhcCCCHHHHHHHHHHHHhhC----CCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence            356677     8999999999999999999999997765    679999999999987633  33456789999999999


Q ss_pred             CCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcC----CCCCHHHHHHHHHHHHh
Q 030405           98 HNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG----MNLSDDVIESIIDKVLS  173 (178)
Q Consensus        98 ~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~----~~l~~~~~~~~~~~~~~  173 (178)
                      ++|.|+|+||+..+..... ...++.++.+|+.||.|++|+|+.+|+..++..++....    ....+...+..++.+|.
T Consensus        72 ~~g~i~~~eFl~~~~~~~~-~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~  150 (181)
T d1bjfa_          72 GDGTIDFREFIIALSVTSR-GKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFR  150 (181)
T ss_dssp             CSSEEEHHHHHHHHHHHTS-SCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHH
T ss_pred             CCCcEeHHHHHHHHHHHhh-hchHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHH
Confidence            9999999999999998886 678899999999999999999999999999998865322    12223445567778888


Q ss_pred             hccC
Q 030405          174 LIQL  177 (178)
Q Consensus       174 ~~D~  177 (178)
                      ++|.
T Consensus       151 ~~D~  154 (181)
T d1bjfa_         151 QMDT  154 (181)
T ss_dssp             HSCT
T ss_pred             HhCC
Confidence            8874

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.83  E-value=2.7e-20  Score=133.97  Aligned_cols=148  Identities=30%  Similarity=0.474  Sum_probs=121.9

Q ss_pred             CccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--CCCCHHHHHHHHHHHhcC
Q 030405           20 DADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--NKKESLFADRVFDLFDTK   97 (178)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~~~~~~~~~~lf~~~d~~   97 (178)
                      .+.+++     +.++.+...++|+..++..|++.|...+    ++|.|+..+|..++...  .......++++|+.+|.+
T Consensus         5 ~~~l~~-----e~l~~l~~~t~f~~~ei~~l~~~F~~~~----~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~   75 (201)
T d1omra_           5 SGALSK-----EILEELQLNTKFTEEELSSWYQSFLKEC----PSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDAN   75 (201)
T ss_dssp             SCTHHH-----HHHHHHGGGCSSCHHHHHHHHHHHHHHC----TTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSC
T ss_pred             cCCCCH-----HHHHHHHHhCCCCHHHHHHHHHHHHHHC----cCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccC
Confidence            445666     7899999999999999999999997665    67999999999998663  345567789999999999


Q ss_pred             CCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcC----CCC--CHHHHHHHHHHH
Q 030405           98 HNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG----MNL--SDDVIESIIDKV  171 (178)
Q Consensus        98 ~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~----~~l--~~~~~~~~~~~~  171 (178)
                      ++|.|+|.||+.++..+.. ...++.++.+|+.||.|++|.|+.+|+..++..++...+    ..+  ....++..++++
T Consensus        76 ~~G~I~f~EF~~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  154 (201)
T d1omra_          76 SDGTLDFKEYVIALHMTSA-GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKI  154 (201)
T ss_dssp             SSSEEEHHHHHHHHHHHHS-SCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHH
T ss_pred             CCCeEeehhHHHHHHhhcc-cchHHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHH
Confidence            9999999999999988776 677888999999999999999999999999998754322    111  122355678888


Q ss_pred             HhhccC
Q 030405          172 LSLIQL  177 (178)
Q Consensus       172 ~~~~D~  177 (178)
                      |..+|.
T Consensus       155 f~~~D~  160 (201)
T d1omra_         155 WGFFGK  160 (201)
T ss_dssp             HHHTTC
T ss_pred             HHHhCC
Confidence            988874

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.83  E-value=1.2e-19  Score=128.20  Aligned_cols=140  Identities=29%  Similarity=0.545  Sum_probs=115.1

Q ss_pred             HHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHH
Q 030405           33 PEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILDFEEFARA  110 (178)
Q Consensus        33 ~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~  110 (178)
                      +.++.+.+.|++.+++.+++.|...+    ++|.|+..+|..++..  .....+..++++|+.+|.+++|.|+|+||+.+
T Consensus         1 ~~~l~~~t~ft~~ei~~l~~~F~~~~----~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~   76 (178)
T d1s6ca_           1 LEQLEAQTNFTKRELQVLYRGFKNEC----PSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTA   76 (178)
T ss_dssp             CHHHHHHSSCCHHHHHHHHHHHHHHC----TTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred             CHHHHhcCCCCHHHHHHHHHHHHHHC----cCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHH
Confidence            35788999999999999999997665    6799999999998866  33446677899999999999999999999999


Q ss_pred             HHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcC----CCCCHHHHHHHHHHHHhhccC
Q 030405          111 LSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG----MNLSDDVIESIIDKVLSLIQL  177 (178)
Q Consensus       111 ~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~----~~l~~~~~~~~~~~~~~~~D~  177 (178)
                      +..+.. ....+.++.+|+.||.+++|.|+.+|+..++..++...+    ..+++...+..++.+|..+|.
T Consensus        77 ~~~~~~-~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~  146 (178)
T d1s6ca_          77 LSILLR-GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDK  146 (178)
T ss_dssp             HHHHHH-CCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCT
T ss_pred             HHHHhc-cchHHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCC
Confidence            887776 577889999999999999999999999999988766543    345666667888899998884

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.2e-20  Score=133.83  Aligned_cols=140  Identities=21%  Similarity=0.364  Sum_probs=111.5

Q ss_pred             HHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCC--------cccHHHHHHHHhcCCCCCHHHHHHHHHHHhcC-CCCccc
Q 030405           33 PEALARETVFSVSEIEALYELFKKISSAVIDDG--------LINKEEFQLALFKTNKKESLFADRVFDLFDTK-HNGILD  103 (178)
Q Consensus        33 ~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g--------~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~-~~g~i~  103 (178)
                      +..+++.++||++++.+|+..|..++++  +.|        +++..+|..+.   ....++.++++|+.+|.+ ++|.|+
T Consensus         2 l~~~~~~T~ft~~EI~~l~~~F~~l~~~--~~~~~~~~~~~~i~~~e~~~~~---~l~~~~~~~rif~~fd~~~~~g~I~   76 (180)
T d1xo5a_           2 LAEYQDLTFLTKQEILLAHRRFCELLPQ--EQRSVESSLRAQVPFEQILSLP---ELKANPFKERICRVFSTSPAKDSLS   76 (180)
T ss_dssp             CGGGSCCCCSCHHHHHHHHHHHHTTSCG--GGCSHHHHHHCCEEHHHHHTSH---HHHTCTTHHHHHHHHCCSTTCCEEC
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHCcC--ccccccccccceEcHHHHhcCc---ccccChHHHHHHHhccCCCCCCcCc
Confidence            3456778899999999999999999876  544        35566664322   122233568999999987 689999


Q ss_pred             HHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhh-cCCCCCHHHHHHHHHHHHhhccC
Q 030405          104 FEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE-SGMNLSDDVIESIIDKVLSLIQL  177 (178)
Q Consensus       104 ~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~-~~~~l~~~~~~~~~~~~~~~~D~  177 (178)
                      |+||+.++..+...+..+++++.+|+.||.|++|+|+.+|+..++..++.. .+..+++++++++++.+|.++|.
T Consensus        77 f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~  151 (180)
T d1xo5a_          77 FEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDI  151 (180)
T ss_dssp             HHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCC
Confidence            999999999887656788999999999999999999999999999987432 24578888999999999999884

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=5.2e-20  Score=128.56  Aligned_cols=131  Identities=31%  Similarity=0.525  Sum_probs=114.2

Q ss_pred             hcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC
Q 030405           39 ETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS  118 (178)
Q Consensus        39 ~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~  118 (178)
                      .+.||++|+++|++.|..+|.+  ++|.|+..+|..++....   .+.++++|+.+|.+++|.|+|.||+..+.......
T Consensus         7 ~t~ft~eei~~l~~~F~~~D~d--~~G~I~~~E~~~~~~~~~---~~~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~   81 (165)
T d1auib_           7 CSHFDADEIKRLGKRFKKLDLD--NSGSLSVEEFMSLPELQQ---NPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG   81 (165)
T ss_dssp             CCSCCHHHHHHHHHHHHHHCTT--CCSEECHHHHTTSHHHHT---CTTHHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTC
T ss_pred             cCCCCHHHHHHHHHHHHHHCCC--CCCCCcHHHHHHhhhccC---CHHHHHHHHHHccccchhhhhhhhhhhccccccch
Confidence            4679999999999999999999  999999999987654422   23457899999999999999999999999887656


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhccC
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLSLIQL  177 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~D~  177 (178)
                      ...+.++.+|+.+|.|++|.|+.+|+..+++..   .+..+++...+..++.+|..+|.
T Consensus        82 ~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~---~~~~~~~~~~~~~~~~~~~~~D~  137 (165)
T d1auib_          82 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM---VGNNLKDTQLQQIVDKTIINADK  137 (165)
T ss_dssp             CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH---HTTSSCHHHHHHHHHHHHHHHCT
T ss_pred             hhHHHHHHHHHHhcccccccccHHHHHHHHHHh---ccccCchHHHHHHHHHHHHHcCC
Confidence            677889999999999999999999999998765   36788988889999999998874

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.81  E-value=2.2e-19  Score=122.71  Aligned_cols=125  Identities=19%  Similarity=0.366  Sum_probs=107.3

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP  119 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~  119 (178)
                      ++|+++++.|+..|..+|++  ++|.|+..+|..++...+ ......+..++..+|.+++|.|+|++|...+........
T Consensus         2 ~lt~~e~~~l~~~F~~~D~~--~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~   79 (146)
T d1exra_           2 QLTEEQIAEFKEAFALFDKD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQD   79 (146)
T ss_dssp             CCCHHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHcCC--CCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccC
Confidence            48999999999999999999  999999999999987633 344567899999999999999999999998865543233


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ..+.++.+|+.+|.|++|.|+.+||..++..+    |..+++++++.++..+
T Consensus        80 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~----~~~~~~~~~~~i~~~~  127 (146)
T d1exra_          80 SEEELIEAFKVFDRDGNGLISAAELRHVMTNL----GEKLTDDEVDEMIREA  127 (146)
T ss_dssp             HHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHT----TCCCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH----hhcCCHHHHHHHHHHh
Confidence            45789999999999999999999999999776    8899999988776654

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=1.4e-18  Score=118.79  Aligned_cols=126  Identities=17%  Similarity=0.345  Sum_probs=111.4

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS  118 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~  118 (178)
                      +++|++++..++.+|..+|++  ++|+|+..+|..++...+ ......+..++..++.++.+.++|++|...+.......
T Consensus         2 ~~ls~~~i~~l~~~F~~~D~d--~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (146)
T d1lkja_           2 SNLTEEQIAEFKEAFALFDKD--NNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSN   79 (146)
T ss_dssp             CCCCHHHHHHHHHHHHHHCCS--SSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCC
T ss_pred             CCCCHHHHHHHHHHHHHHCCC--CCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccc
Confidence            468999999999999999999  999999999999987744 33455677888889999999999999999998887766


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ...+.++.+|+.||.+++|+|+.+||++++..+    |.++++++++.+++.+
T Consensus        80 ~~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~----g~~~~~~~~~~~~~~~  128 (146)
T d1lkja_          80 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSI----GEKLTDAEVDDMLREV  128 (146)
T ss_dssp             CHHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHH----TCSCCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc----CCcccHHHHHHHHHhc
Confidence            778889999999999999999999999999887    8999999998877654

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.81  E-value=8.1e-19  Score=119.57  Aligned_cols=119  Identities=17%  Similarity=0.294  Sum_probs=100.6

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCC-HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKE-SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI  120 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~-~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~  120 (178)
                      +|+++++.++++|..+|++  ++|.|+..+|..++...+... ...+..++    .+.+|.|+|.+|+..+.........
T Consensus         1 L~~~qi~e~~~~F~~~D~d--~~G~I~~~el~~~l~~lg~~~~~~el~~~~----~~~~~~i~~~eF~~~~~~~~~~~~~   74 (142)
T d1wdcb_           1 LPQKQIQEMKEAFSMIDVD--RDGFVSKEDIKAISEQLGRAPDDKELTAML----KEAPGPLNFTMFLSIFSDKLSGTDS   74 (142)
T ss_dssp             CCHHHHHHHHHHHHHHCTT--CSSSCCHHHHHHHHHHHSSCCCHHHHHHHH----TTSSSCCCHHHHHHHHHHHTCSCCC
T ss_pred             CCHHHHHHHHHHHHHHcCC--CCCcCChHHHHHHHHHhhcCCCHHHHHHHH----HhccCccccccccccccccccccch
Confidence            5889999999999999999  999999999999998754443 33344444    3568899999999998877665677


Q ss_pred             hHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 030405          121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK  170 (178)
Q Consensus       121 ~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~  170 (178)
                      .+.++.+|+.||.+++|+|+.+||+.+|..+    |.++++++++.+++.
T Consensus        75 ~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~----g~~lt~~e~~~l~~~  120 (142)
T d1wdcb_          75 EETIRNAFAMFDEQETKKLNIEYIKDLLENM----GDNFNKDEMRMTFKE  120 (142)
T ss_dssp             HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHS----SSCCCHHHHHHHHHH
T ss_pred             hhhHHHhhhhhcccCCCcccHHHHHHHHHHc----cccCCHHHHHHHHHH
Confidence            8899999999999999999999999999876    889999998876654

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.79  E-value=5.2e-19  Score=120.92  Aligned_cols=124  Identities=19%  Similarity=0.322  Sum_probs=104.9

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPID  121 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~  121 (178)
                      |++++|+.++++|..+|.+  ++|.|+..+|..++...+..+..  ..++..+..+.+|.|+|++|+..+..........
T Consensus         1 f~~~qi~el~e~F~~~D~~--~~G~I~~~e~~~~l~~lg~~~~~--~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~   76 (145)
T d2mysb_           1 FDETEIEDFKEAFTVIDQN--ADGIIDKDDLRETFAAMGRLNVK--NEELDAMIKEASGPINFTVFLTMFGEKLKGADPE   76 (145)
T ss_pred             CCHHHHHHHHHHHHHHCCC--CCCCCCHHHHHHHHHHhCCCcch--HHHHHHHHHhccCceeechhhhhhhhcccccchH
Confidence            6889999999999999999  99999999999999775533322  3456677778889999999999887766545667


Q ss_pred             HHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHh
Q 030405          122 DKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLS  173 (178)
Q Consensus       122 e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~  173 (178)
                      +.++.+|+.||.+++|+|+.+||+++|..+    |.++++++++.++..+-.
T Consensus        77 ~~l~~aF~~fD~~~~g~I~~~el~~~l~~~----g~~ls~~e~~~~~~~~d~  124 (145)
T d2mysb_          77 DVIMGAFKVLDPDGKGSIKKSFLEELLTTG----GGRFTPEEIKNMWAAFPP  124 (145)
T ss_pred             HHHHHHHHhhhhcccchhhHHHHHHHHHHc----CCCCCHHHHHHHHHHhCC
Confidence            789999999999999999999999999876    889999999887776543

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.78  E-value=5.9e-19  Score=125.73  Aligned_cols=122  Identities=21%  Similarity=0.432  Sum_probs=103.1

Q ss_pred             CCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHH
Q 030405           27 PRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFE  105 (178)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~  105 (178)
                      +..++.+..+...+.++..++++|++.|...+    ++|.|+..+|..++...+ ......++.+|+.+|.+++|.|+|.
T Consensus         3 ~~~~e~~~~~~~~~~~~~~ei~~~~~~F~~~~----~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~   78 (189)
T d1jbaa_           3 QFSWEEAEENGAVGAADAAQLQEWYKKFLEEC----PSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFL   78 (189)
T ss_dssp             CSSCHHHHHSSSCCHHHHHHHHHHHHHHHSSS----TTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHH
T ss_pred             CCCHHHHHHHhccCccCHHHHHHHHHHhcccC----CCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeeh
Confidence            34456777777777778888888888887654    579999999999987643 3345678999999999999999999


Q ss_pred             HHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh
Q 030405          106 EFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT  153 (178)
Q Consensus       106 ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~  153 (178)
                      ||+..+..... ...++.++.+|+.||.|++|.|+.+|+..++..++.
T Consensus        79 Ef~~~l~~~~~-~~~~~~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~  125 (189)
T d1jbaa_          79 EYVAALNLVLR-GTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYK  125 (189)
T ss_dssp             HHHHHHHHHSS-CCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHH
T ss_pred             hHHHHHHhhcc-cchHHHHHHHHhhhccCCCCcccHhHHHHHHHHHHH
Confidence            99999998876 677889999999999999999999999999887644

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.76  E-value=4.2e-18  Score=117.21  Aligned_cols=124  Identities=23%  Similarity=0.228  Sum_probs=101.9

Q ss_pred             CCHHHHHHHHHHHHhhcc--cCCCCCcccHHHHHHHHhcCCCCC-HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC-
Q 030405           42 FSVSEIEALYELFKKISS--AVIDDGLINKEEFQLALFKTNKKE-SLFADRVFDLFDTKHNGILDFEEFARALSIFHPN-  117 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~--~~~~~g~i~~~ef~~~l~~~~~~~-~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~-  117 (178)
                      +|++|++.++++|..+|.  +  ++|.|+..+|..+|...+... ...+..+ ...+.+++|.|+|++|+.++...... 
T Consensus         1 Ls~eqi~~l~~~F~~fD~~~~--~dG~I~~~el~~~l~~lG~~~t~~e~~~~-~~~~~~~~~~i~~~eFl~~~~~~~~~~   77 (152)
T d1wdcc_           1 LSQDEIDDLKDVFELFDFWDG--RDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCE   77 (152)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTC--SSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSC
T ss_pred             CCHHHHHHHHHHHHHHCcCCC--CCCeECHHHHHHHHHHhccCccHhhhhhh-hhhhccccccccccccccccccccccc
Confidence            588999999999999985  6  789999999999998865443 3444444 33466778999999999998776542 


Q ss_pred             CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 030405          118 SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL  172 (178)
Q Consensus       118 ~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~  172 (178)
                      ....+.+..+|+.||.+++|+|+.+||+.+|..+    |.++++++++.+++.+-
T Consensus        78 ~~~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~----g~~ls~~e~~~l~~~~d  128 (152)
T d1wdcc_          78 QGTFADYMEAFKTFDREGQGFISGAELRHVLTAL----GERLSDEDVDEIIKLTD  128 (152)
T ss_dssp             CCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHS----SSCCCHHHHHHHHHHHT
T ss_pred             hhHHHhhhhhhhccccccCccchHHHHHHHHHHc----CCCCCHHHHHHHHHHhc
Confidence            3556789999999999999999999999999776    89999999998877664

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2e-17  Score=112.01  Aligned_cols=124  Identities=19%  Similarity=0.344  Sum_probs=105.7

Q ss_pred             CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChh
Q 030405           43 SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPID  121 (178)
Q Consensus        43 ~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~  121 (178)
                      |+++.+.++++|..+|++  ++|.|+..+|..++...+ ......+..++..+|.+++|.|+|.+|...+..........
T Consensus         1 t~~~~~elk~~F~~~D~~--~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~   78 (141)
T d2obha1           1 TEEQKQEIREAFDLFDAD--GTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTK   78 (141)
T ss_dssp             CHHHHHHHHHHHHTTCTT--CCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCC--CCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccH
Confidence            567889999999999999  999999999999987744 44456788999999999999999999999886554333445


Q ss_pred             HHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 030405          122 DKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL  172 (178)
Q Consensus       122 e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~  172 (178)
                      +.++.+|+.+|.+++|+|+.++|..++..+    |.++++.++..+++.+-
T Consensus        79 ~~l~~~f~~~d~~~~G~i~~~el~~~l~~~----g~~l~~~e~~~l~~~~D  125 (141)
T d2obha1          79 EEILKAFKLFDDDETGKISFKNLKRVAKEL----GENLTDEELQEMIDEAD  125 (141)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHT----TCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhcccCCCCccHHHHHHHHHHh----CCCCCHHHHHHHHHHHC
Confidence            778999999999999999999999998776    88999999887766553

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.68  E-value=1.5e-16  Score=110.16  Aligned_cols=125  Identities=20%  Similarity=0.363  Sum_probs=103.3

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC--
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPN--  117 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~--  117 (178)
                      .+|++++..++++|..+|++  ++|.|+..+|..++.... ......+..++..++.+++|.+++.+|...+......  
T Consensus        13 ~ls~~~i~el~~~F~~~D~d--~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~   90 (162)
T d1topa_          13 FLSEEMIAEFKAAFDMFDAD--GGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDA   90 (162)
T ss_dssp             HSCHHHHHHHHHHHHTTTCS--CSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHcCC--CCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhc
Confidence            48999999999999999999  999999999999887744 4446678899999999999999999998776543210  


Q ss_pred             -CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          118 -SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       118 -~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                       ....+.++.+|+.+|.|++|+|+.+||++++...    +...+++++..+++.+
T Consensus        91 ~~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~----~~~~~~~~~~~l~~~~  141 (162)
T d1topa_          91 KGKSEEELANCFRIFDKNADGFIDIEELGEILRAT----GEHVTEEDIEDLMKDS  141 (162)
T ss_dssp             HHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT----TCCCCHHHHHHHHHHH
T ss_pred             ccCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhh----CCCCCHHHHHHHHHHh
Confidence             1234567889999999999999999999998765    7788888877665544

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.68  E-value=3.7e-16  Score=106.32  Aligned_cols=116  Identities=13%  Similarity=0.240  Sum_probs=95.2

Q ss_pred             HHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcC--CCCcccHHHHHHHHHhhCCC--CChhH
Q 030405           48 EALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTK--HNGILDFEEFARALSIFHPN--SPIDD  122 (178)
Q Consensus        48 ~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~--~~g~i~~~ef~~~~~~~~~~--~~~~e  122 (178)
                      +.++++|..+|.+  ++|.|+..+|..++...+.. ....+..++..++.+  ++|.|+|.+|...+......  ....+
T Consensus         4 eelke~F~~~D~d--~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~   81 (145)
T d2mysc_           4 DDFKEAFLLFDRT--GDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFE   81 (145)
T ss_pred             HHHHHHHHHHcCC--CCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHH
Confidence            5688899999999  99999999999999775433 334567777777654  57899999999987654432  23456


Q ss_pred             HHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHH
Q 030405          123 KIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIID  169 (178)
Q Consensus       123 ~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~  169 (178)
                      .++.+|+.||.+++|+|+.+||+++|..+    |.+++.++++.+++
T Consensus        82 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~----g~~~~~~e~~~l~~  124 (145)
T d2mysc_          82 DFVEGLRVFDKEGNGTVMGAELRHVLATL----GEKMTEEEVEELMK  124 (145)
T ss_pred             HHHHHHHHhhcCCCCEEcHHHHHHHHHHh----CCCCCHHHHHHHHh
Confidence            79999999999999999999999999887    88999999998875

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.68  E-value=2.9e-16  Score=108.07  Aligned_cols=127  Identities=20%  Similarity=0.330  Sum_probs=103.2

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCC-CCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC---
Q 030405           41 VFSVSEIEALYELFKKISSAVID-DGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFH---  115 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~-~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~---  115 (178)
                      .+|+++++.++.+|..+|.+  + +|.|+..+|..++...+.. ....+..++..++.++.|.+++.+|...+....   
T Consensus         7 ~Lt~~~~~~l~~~F~~~D~d--~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (156)
T d1dtla_           7 QLTEEQKNEFKAAFDIFVLG--AEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD   84 (156)
T ss_dssp             GSCHHHHHHHHHHHHHHTTT--CGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC--
T ss_pred             HCCHHHHHHHHHHHHHHcCC--CCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhccccc
Confidence            48999999999999999987  6 6999999999999885544 356678899999999999999999987654322   


Q ss_pred             CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHh
Q 030405          116 PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLS  173 (178)
Q Consensus       116 ~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~  173 (178)
                      ......+.++.+|+.||.+++|+|+.+||.+++..+    |.++++++++.+++.+-.
T Consensus        85 ~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~----~~~ls~~e~~~i~~~~D~  138 (156)
T d1dtla_          85 SKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQAT----GETITEDDIEELMKDGDK  138 (156)
T ss_dssp             ---CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC------CCCHHHHHHHHHHHCT
T ss_pred             ccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhc----CCCCCHHHHHHHHHHhCC
Confidence            113566789999999999999999999999987654    889999998887766543

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.66  E-value=6.3e-16  Score=104.76  Aligned_cols=114  Identities=18%  Similarity=0.264  Sum_probs=93.4

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC--CChhHHHHH
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPN--SPIDDKIEF  126 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~--~~~~e~~~~  126 (178)
                      .++++|..+|.+  ++|.|+..+|..+|...+...+.   ..+..++.+.+|.|+|++|+.++......  ....+.++.
T Consensus         6 ~fke~F~~~D~d--~dG~I~~~el~~~l~~lg~~~t~---~ei~~~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~   80 (140)
T d1ggwa_           6 PYKQAFSLFDRH--GTGRIPKTSIGDLLRACGQNPTL---AEITEIESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK   80 (140)
T ss_dssp             TTHHHHHHTCSS--SSSEECHHHHHHHHHHTSCCCCH---HHHHHHHTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred             HHHHHHHHHCCC--CCCeECHHHHHHHHHHHHhhhHH---HhhhhhhccccccccchhhhhhhhhhhhcchhhHHHHHHH
Confidence            468899999999  99999999999999886655433   23445677889999999999988754432  234567999


Q ss_pred             HHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          127 SFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       127 ~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      +|+.||.+++|+|+.+||+.+|..+    |.++++++++.+++.+
T Consensus        81 aF~~~D~d~~G~I~~~el~~~l~~~----g~~lt~~e~~~l~~~~  121 (140)
T d1ggwa_          81 GFQVFDKDATGMIGVGELRYVLTSL----GEKLSNEEMDELLKGV  121 (140)
T ss_dssp             HHHTTCSSCSSCCCHHHHHHHHHHH----HSCSCHHHHHHHHHHT
T ss_pred             HHHHHhccCCCcchHHHHHHHHHHc----CCCCCHHHHHHHHHhh
Confidence            9999999999999999999999887    8889999988777654

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.64  E-value=2.2e-15  Score=106.24  Aligned_cols=112  Identities=24%  Similarity=0.456  Sum_probs=96.9

Q ss_pred             HHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHH
Q 030405           47 IEALYELFKKISSAVIDDGLINKEEFQLALFKTN--KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKI  124 (178)
Q Consensus        47 i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~  124 (178)
                      ..+|...|..+|.+  ++|+|+..+|..++....  ......++.+++.+|.+++|.|+|+||+.++...       ..+
T Consensus        18 ~~~L~~iF~~~D~d--~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~-------~~~   88 (181)
T d1hqva_          18 QSFLWNVFQRVDKD--RSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI-------TDW   88 (181)
T ss_dssp             HHHHHHHHHHHCTT--CCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHH-------HHH
T ss_pred             HHHHHHHHHHHcCC--CCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhhc-------ccc
Confidence            35799999999999  999999999999987643  2355678999999999999999999999988654       457


Q ss_pred             HHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          125 EFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       125 ~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      +.+|+.+|.+++|.|+.+||+.++...    +..+++++++.++..+
T Consensus        89 ~~~f~~~D~~~~G~i~~~el~~~l~~~----~~~l~~e~~~~~~~~~  131 (181)
T d1hqva_          89 QNVFRTYDRDNSGMIDKNELKQALSGF----GYRLSDQFHDILIRKF  131 (181)
T ss_dssp             HHHHHHHCTTCCSSBCHHHHHHHHHHH----TBCCCHHHHHHHHHHH
T ss_pred             ccccccccccccchhhhHHHHHHHHHc----CCcchhHHHHHHHHHh
Confidence            899999999999999999999999876    7789999888776655

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=4.4e-15  Score=103.27  Aligned_cols=108  Identities=21%  Similarity=0.413  Sum_probs=90.8

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC------CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHH
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLALFKTNKK------ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDK  123 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~------~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~  123 (178)
                      ++..|++++ +  .+|.|+..||..+|...+..      +...++.++..+|.+++|.|+|+||+.++..+       ..
T Consensus         2 ~~~~F~~~a-~--~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~-------~~   71 (165)
T d1k94a_           2 VYTYFSAVA-G--QDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL-------NA   71 (165)
T ss_dssp             HHHHHHHHH-G--GGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------HH
T ss_pred             hHHHHHHhc-C--CCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhcc-------ch
Confidence            467787774 3  58999999999998663322      34568999999999999999999999988654       56


Q ss_pred             HHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          124 IEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       124 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ++.+|+.||+|++|+|+.+|++.+|..+    |..+++++++.++.++
T Consensus        72 ~~~~F~~fD~d~sG~I~~~El~~~l~~~----G~~l~~~~~~~l~~~~  115 (165)
T d1k94a_          72 WKENFMTVDQDGSGTVEHHELRQAIGLM----GYRLSPQTLTTIVKRY  115 (165)
T ss_dssp             HHHHHHHHCTTCCSBCCHHHHHHHHHHT----TCCCCHHHHHHHHHHH
T ss_pred             hHHHHHHhCCCCCCeEcHHHHHHHHHHh----hhcCCHHHHHHHHHHc
Confidence            8999999999999999999999998776    8999999999888764

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.61  E-value=2.3e-16  Score=111.52  Aligned_cols=122  Identities=25%  Similarity=0.374  Sum_probs=102.3

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCC
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSP  119 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~  119 (178)
                      +|+++|++.|+++|..+|.+  ++|+|+..+|..++...+. .....++.+|..+|.+++|.|+|.+|+..+..... ..
T Consensus         3 ~Lt~~ei~~l~~~F~~~D~d--~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-~~   79 (182)
T d1s6ia_           3 RLSEEEIGGLKELFKMIDTD--NSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNK-LE   79 (182)
T ss_dssp             SSSCTTTCSHHHHHHTTSSS--SSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSS-SC
T ss_pred             CCCHHHHHHHHHHHHHHcCC--CcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhcc-cc
Confidence            57888899999999999999  9999999999999987543 34566899999999999999999999998776655 45


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ..+.++.+|+.+|.+++|+|+.+++.+++..+      .+++.+++.+++.+
T Consensus        80 ~~e~l~~aF~~~D~d~~G~i~~~el~~~l~~~------gl~~~ev~~~f~~~  125 (182)
T d1s6ia_          80 REENLVSAFSYFDKDGSGYITLDEIQQACKDF------GLDDIHIDDMIKEI  125 (182)
T ss_dssp             CCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTT------TCCTTHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhhcCCCccchhhhhhhhhhc------CccHHHHHHHHHHh
Confidence            56678999999999999999999999988543      37777777655544

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=99.59  E-value=9.6e-15  Score=103.03  Aligned_cols=113  Identities=19%  Similarity=0.410  Sum_probs=96.3

Q ss_pred             HHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHH
Q 030405           48 EALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEF  126 (178)
Q Consensus        48 ~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~  126 (178)
                      ++|...|+.+|.+  ++|+|+..+|..++...+.. ....++.++..+|.+++|.|+|++|...+...       ..+..
T Consensus        18 ~~l~~~F~~~D~d--~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~~-------~~~~~   88 (182)
T d1y1xa_          18 QELMEWFRAVDTD--GSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI-------LSMRE   88 (182)
T ss_dssp             SCHHHHHHHHCTT--CSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-------HHHHH
T ss_pred             HHHHHHHHHHcCC--CcCCCCHHHHHHHHHHhcccCchhhhhhhhccccccccccccccccccccccc-------ccccc
Confidence            3689999999999  99999999999998775433 45668999999999999999999999877543       56888


Q ss_pred             HHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHh
Q 030405          127 SFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLS  173 (178)
Q Consensus       127 ~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~  173 (178)
                      +|+.+|.+++|.|+.+||..++..+    |..+++++++.+++.+-.
T Consensus        89 ~F~~~D~~~~g~I~~~el~~~l~~~----g~~ls~~e~~~i~~~~d~  131 (182)
T d1y1xa_          89 GFRKRDSSGDGRLDSNEVRAALLSS----GYQVSEQTFQALMRKFDR  131 (182)
T ss_dssp             HHHHHCTTSSSCBCHHHHHHHHHTT----SCCCCHHHHHHHHHHHCT
T ss_pred             chhccccccchhhhhHHHHHHHHHh----CCchhHHHHHHHHhhccc
Confidence            9999999999999999999998765    888999998877766543

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=99.57  E-value=2.4e-14  Score=95.47  Aligned_cols=98  Identities=22%  Similarity=0.348  Sum_probs=82.0

Q ss_pred             HHHHHhhcccCCCCCcccHHHHHHHHhcCCCCC-HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCh--hHHHHHH
Q 030405           51 YELFKKISSAVIDDGLINKEEFQLALFKTNKKE-SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI--DDKIEFS  127 (178)
Q Consensus        51 ~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~-~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~--~e~~~~~  127 (178)
                      ...|..+|.+  ++|.|+..+|..++...+... ...++.+|..+|.+++|.|+|+||...+.........  ...++.+
T Consensus         3 e~~F~~~D~d--~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T d1jfja_           3 EALFKEIDVN--GDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVL   80 (134)
T ss_dssp             HHHHHHHCTT--CSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHH
T ss_pred             HHHHHHHcCC--CcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhccccccccccccccccccccccccccccccccc
Confidence            4689999999  999999999999998755443 4568899999999999999999999988765543222  3568899


Q ss_pred             HHhhCCCCCCceeHHHHHHHHHH
Q 030405          128 FQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       128 F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      |+.+|.+++|+|+.+|+..++..
T Consensus        81 F~~~D~~~~g~i~~~el~~~~~~  103 (134)
T d1jfja_          81 YKLMDVDGDGKLTKEEVTSFFKK  103 (134)
T ss_dssp             HHHHCCSSSSEEEHHHHHHHHTT
T ss_pred             ccccccccCCcccHHHHHHHHHh
Confidence            99999999999999999999743

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=8.2e-15  Score=102.42  Aligned_cols=109  Identities=22%  Similarity=0.454  Sum_probs=91.4

Q ss_pred             HHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC------CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChh
Q 030405           48 EALYELFKKISSAVIDDGLINKEEFQLALFKTNKK------ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPID  121 (178)
Q Consensus        48 ~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~------~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~  121 (178)
                      ..++..|..++ +  ++|.|+..||..+|...+..      +...++.+++.+|.|++|.|+|.||+..+...       
T Consensus         7 ~~~~~~F~~~~-~--~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~-------   76 (172)
T d1juoa_           7 DPLYGYFAAVA-G--QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-------   76 (172)
T ss_dssp             CTTHHHHHHHH-T--TTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH-------
T ss_pred             HHHHHHHHHhC-C--CCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhh-------
Confidence            45788888876 4  78999999999998763321      34668999999999999999999999887543       


Q ss_pred             HHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 030405          122 DKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK  170 (178)
Q Consensus       122 e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~  170 (178)
                      ..+..+|+.||.+++|.|+.+|+..+|..+    |..+++++++.++++
T Consensus        77 ~~~~~~f~~~D~d~sG~i~~~El~~~l~~~----g~~ls~~~~~~l~~~  121 (172)
T d1juoa_          77 NGWRQHFISFDTDRSGTVDPQELQKALTTM----GFRLSPQAVNSIAKR  121 (172)
T ss_dssp             HHHHHHHHTTCTTCCSEECHHHHHHHHHHT----TCCCCHHHHHHHHHH
T ss_pred             hhhhHHHHHhCcCCCCcCCHHHHHHHHHHH----HHhhhHHHHHHHHHH
Confidence            457889999999999999999999998776    888999988877665

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=9.6e-15  Score=98.37  Aligned_cols=114  Identities=16%  Similarity=0.251  Sum_probs=89.8

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhc--CCCCcccHHHHHHHHHhhCCCC--ChhHHH
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDT--KHNGILDFEEFARALSIFHPNS--PIDDKI  124 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~--~~~g~i~~~ef~~~~~~~~~~~--~~~e~~  124 (178)
                      ++++|..+|++  ++|.|+..+|..++...+.. ....+..++..++.  +++|.|+|.+|...+.......  ...+.+
T Consensus         2 ~ke~F~~~D~d--~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l   79 (139)
T d1w7jb1           2 FKEAFELFDRV--GDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDY   79 (139)
T ss_dssp             HHHHHHHHCCS--SSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CC
T ss_pred             HHHHHHHHhCC--CCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHH
Confidence            67899999999  99999999999999885533 44556677665543  5688999999999887654322  234558


Q ss_pred             HHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHH
Q 030405          125 EFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIID  169 (178)
Q Consensus       125 ~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~  169 (178)
                      +.+|+.+|.+++|+|+.+||+++|..+    |.++++++++.++.
T Consensus        80 ~~aF~~~D~d~~G~I~~~el~~~l~~~----g~~~~~~e~~~l~~  120 (139)
T d1w7jb1          80 LEGFRVFDKEGNGKVMGAELRHVLTTL----GEKMTEEEVETVLA  120 (139)
T ss_dssp             HHHHHTTCTTSSSEEEHHHHHHHHHHS----SSCCCHHHHHHHHT
T ss_pred             HHhhhhccCCCCCeEeHHHHHHHHHHh----CCCCCHHHHHHHHh
Confidence            899999999999999999999999876    88999999887654

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.53  E-value=5.2e-15  Score=100.66  Aligned_cols=115  Identities=12%  Similarity=0.271  Sum_probs=89.6

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHH-HhcCCCCcccHHHHHHHHHhhC-----CCCChhH
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDL-FDTKHNGILDFEEFARALSIFH-----PNSPIDD  122 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~-~d~~~~g~i~~~ef~~~~~~~~-----~~~~~~e  122 (178)
                      ++++|..+|.+  ++|.|+.++|..++...+.. ....++.++.. .+.+.+|.|+|.+|...+....     ......+
T Consensus         4 ~k~~F~~~D~d--~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~   81 (146)
T d1m45a_           4 NKDIFTLFDKK--GQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTE   81 (146)
T ss_dssp             CTTCHHHHCTT--CCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTH
T ss_pred             HHHHHHHHcCC--CcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHH
Confidence            56789999999  99999999999999885543 45566777764 4555678999999999875332     1123456


Q ss_pred             HHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 030405          123 KIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK  170 (178)
Q Consensus       123 ~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~  170 (178)
                      .+..+|+.||.+++|+|+.+||..+|..+    |.+++++++..++..
T Consensus        82 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~----g~~l~~~ei~~l~~~  125 (146)
T d1m45a_          82 DFVKAFQVFDKESTGKVSVGDLRYMLTGL----GEKLTDAEVDELLKG  125 (146)
T ss_dssp             HHHHHHHTTCSSSSSEEEHHHHHHHHHHS----TTCCCHHHHHHHHTT
T ss_pred             HHHHHHHhhccccccccchhhhhhhhccc----CCcchHHHHHHHHHH
Confidence            79999999999999999999999999876    889999987765543

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=99.53  E-value=1.2e-13  Score=89.37  Aligned_cols=101  Identities=21%  Similarity=0.303  Sum_probs=80.5

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC--CC
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPN--SP  119 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~--~~  119 (178)
                      ++.++|.++...|   +    .+|.|++.+|..++.. .......++.+|+.+|.+++|.|+.+|+..++..+...  ..
T Consensus         6 l~~~di~~~~~~~---~----~~G~idf~eF~~~~~~-~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~   77 (109)
T d5pala_           6 LKADDINKAISAF---K----DPGTFDYKRFFHLVGL-KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDL   77 (109)
T ss_dssp             SCHHHHHHHHHHT---C----STTCCCHHHHHHHHTC-TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred             ccHHHHHHHHHhc---C----CCCcCcHHHHHHHHHh-cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcC
Confidence            5666765555544   3    5688999999987643 23445678999999999999999999999988776431  34


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .+++++.+|+.+|.|++|.|+++||..+|..
T Consensus        78 ~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d5pala_          78 NDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            6778999999999999999999999998853

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.52  E-value=6.1e-14  Score=97.94  Aligned_cols=111  Identities=23%  Similarity=0.337  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC---------CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 030405           45 SEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN---------KKESLFADRVFDLFDTKHNGILDFEEFARALSIFH  115 (178)
Q Consensus        45 ~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~---------~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~  115 (178)
                      ++++++++.|..+|.   .+|.|+..||..+|...+         ......++.++..+|.+++|.|+|++|...+... 
T Consensus         1 ee~~~~r~~F~~~d~---~dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~-   76 (173)
T d1alva_           1 EEVRQFRRLFAQLAG---DDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI-   76 (173)
T ss_dssp             CHHHHHHHHHHHHHG---GGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-
T ss_pred             ChHHHHHHHHHHHcC---CCCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhhh-
Confidence            368899999999994   579999999999985521         1234568899999999999999999999887544 


Q ss_pred             CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHH
Q 030405          116 PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIID  169 (178)
Q Consensus       116 ~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~  169 (178)
                            ..++.+|+.||.+++|.|+..|+..+|..+    |..++++.++.+..
T Consensus        77 ------~~~~~~f~~~D~d~~G~I~~~el~~~L~~~----g~~~~~~~~~~~~~  120 (173)
T d1alva_          77 ------KKWQAIYKQFDVDRSGTIGSSELPGAFEAA----GFHLNEHLYSMIIR  120 (173)
T ss_dssp             ------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHH----TCCCCHHHHHHHHH
T ss_pred             ------hHHHHHHHHhccCCCCeecHHHHHHHHHHH----HHhhHHHHHHHhhc
Confidence                  457899999999999999999999999887    78888877765553

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.51  E-value=1e-13  Score=89.71  Aligned_cols=100  Identities=18%  Similarity=0.254  Sum_probs=80.3

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC--CC
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPN--SP  119 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~--~~  119 (178)
                      ++.++|..+...+   +    ++|.|++.+|..++... ......++.+|+.+|.+++|.|+.+|+..++..+...  ..
T Consensus         6 l~~eeI~~~~~~~---d----~dG~idf~EF~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~l   77 (109)
T d1pvaa_           6 LKADDIKKALDAV---K----AEGSFNHKKFFALVGLK-AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDL   77 (109)
T ss_dssp             SCHHHHHHHHHHT---C----STTCCCHHHHHHHHTCT-TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCC
T ss_pred             CCHHHHHHHHHhc---C----CCCCCcHHHHHHHHHHc-cCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCC
Confidence            5666766665543   3    67889999999877443 3345567899999999999999999999988776432  34


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      +++.+..+|+.+|.|++|.|+++||..+|.
T Consensus        78 s~~ev~~~~~~~D~d~dG~I~~~EF~~~m~  107 (109)
T d1pvaa_          78 TDAETKAFLKAADKDGDGKIGIDEFETLVH  107 (109)
T ss_dssp             CHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHCCCCcCcEeHHHHHHHHH
Confidence            578899999999999999999999999874

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=99.50  E-value=2.4e-15  Score=106.81  Aligned_cols=116  Identities=25%  Similarity=0.345  Sum_probs=80.9

Q ss_pred             CCCHHHHH-HHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC---------CCHHHHHHHHHHHhcCCCCcccHHHHHHH
Q 030405           41 VFSVSEIE-ALYELFKKISSAVIDDGLINKEEFQLALFKTNK---------KESLFADRVFDLFDTKHNGILDFEEFARA  110 (178)
Q Consensus        41 ~~~~~~i~-~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~---------~~~~~~~~lf~~~d~~~~g~i~~~ef~~~  110 (178)
                      .++++++. .++..|..+| +  .+|.|+..||..+|...+.         .....++.++..+|.+++|.|+|+||..+
T Consensus        12 ~ls~~~~~~~~r~~F~~~d-~--~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l   88 (188)
T d1qxpa2          12 VLSEEEIDDNFKTLFSKLA-G--DDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNIL   88 (188)
T ss_dssp             ---------------CCCC-C--SSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHc-C--CCCEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHH
Confidence            36667764 5889999998 4  5799999999887754211         23456899999999999999999999998


Q ss_pred             HHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 030405          111 LSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK  170 (178)
Q Consensus       111 ~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~  170 (178)
                      +..+       ..++.+|+.||+|++|.|+..|++.+|..+    |..++++.++.++..
T Consensus        89 ~~~~-------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~----g~~~~~~~~~~l~~~  137 (188)
T d1qxpa2          89 WNRI-------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAA----GFKLPCQLHQVIVAR  137 (188)
T ss_dssp             HHHH-------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHT----TEECCHHHHHHHHHH
T ss_pred             Hhhh-------HHHHHHHHHhCCCCCCEECHHHHHHHHHHh----hhcCCHHHHHHHHHH
Confidence            8654       568899999999999999999999998776    878888766655543

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.50  E-value=6.4e-14  Score=94.94  Aligned_cols=133  Identities=17%  Similarity=0.275  Sum_probs=105.5

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--C
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--K   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~   81 (178)
                      ..|+.+|..+.-+..+.++.     ..+..+....+.  +..+   +...|..+|.+  ++|.|+..+|..++....  .
T Consensus         9 ~~l~~~F~~~D~~~~G~Is~-----~e~~~~l~~~~~~~~~~~---~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~~~   78 (146)
T d1exra_           9 AEFKEAFALFDKDGDGTITT-----KELGTVMRSLGQNPTEAE---LQDMINEVDAD--GNGTIDFPEFLSLMARKMKEQ   78 (146)
T ss_dssp             HHHHHHHHHHCTTCSSEECH-----HHHHHHHHHHTCCCCHHH---HHHHHHHHCTT--CSSSEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeECH-----HHHHHHHHhcCCCCCHHH---HHHHHHhcCCC--CCCcccHHHHHHHHHHHhhcc
Confidence            34677788888888888887     788776665444  4444   44556666777  899999999998874421  1


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .....+..+|+.+|.+++|.|+..||...+..+.. ...++.+..+|+.+|.|++|.|+++||.++|.
T Consensus        79 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~-~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~  145 (146)
T d1exra_          79 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE-KLTDDEVDEMIREADIDGDGHINYEEFVRMMV  145 (146)
T ss_dssp             HHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTC-CCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             ChHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence            12345788999999999999999999999988876 56778999999999999999999999999873

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.48  E-value=4.7e-13  Score=94.57  Aligned_cols=134  Identities=14%  Similarity=0.168  Sum_probs=97.3

Q ss_pred             cchhhhhhhcc-cCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-CCCCCHH
Q 030405            8 LKHFCVVVVNC-CDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESL   85 (178)
Q Consensus         8 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~~~~~   85 (178)
                      |++.+..|... .++.++.     ..+.++....+.... -..+...|..+|.+  ++|.|+..+|..++.. .......
T Consensus        23 i~~~~~~F~~~~~~G~i~~-----~Ef~~~l~~~~~~~~-~~~~~~lf~~~D~d--~dG~I~f~Ef~~~l~~~~~~~~~~   94 (189)
T d1jbaa_          23 LQEWYKKFLEECPSGTLFM-----HEFKRFFKVPDNEEA-TQYVEAMFRAFDTN--GDNTIDFLEYVAALNLVLRGTLEH   94 (189)
T ss_dssp             HHHHHHHHHSSSTTCCEEH-----HHHHHHHHCCSSSTT-HHHHHHHHHHHCCS--SSSEECHHHHHHHHHHHSSCCCTH
T ss_pred             HHHHHHHhcccCCCCeeeH-----HHHHHHHHHcCCCcc-HHHHHHHHHHhccC--CCCeEeehhHHHHHHhhcccchHH
Confidence            34445555533 3566666     777776665444321 23356677888888  9999999999998866 3344456


Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhC----------------CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFH----------------PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~----------------~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .++.+|+.+|.+++|.|++.++..++..+.                .....++.+..+|+.+|.|++|.|+.+||.+++.
T Consensus        95 ~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~  174 (189)
T d1jbaa_          95 KLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR  174 (189)
T ss_dssp             HHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHT
T ss_pred             HHHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            678999999999999999999988765321                1112346678999999999999999999999984

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.48  E-value=1.2e-13  Score=97.85  Aligned_cols=99  Identities=21%  Similarity=0.380  Sum_probs=80.6

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHHHhc-CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC-----------C
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHP-----------N  117 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~-----------~  117 (178)
                      ....|..+|.+  ++|.|+..+|..++.. ........++.+|+.+|.|++|.|+++|+..++.....           .
T Consensus        65 ~~~if~~~D~~--~~G~I~~~Ef~~~~~~~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~  142 (190)
T d1fpwa_          65 ANHLFTVFDKD--NNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDE  142 (190)
T ss_dssp             HHHHHHTCCSS--CSSEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCC
T ss_pred             HHHHHHHhCcC--CCCcccHHHHHHHHHHHccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchh
Confidence            34578888988  9999999999998765 33344566899999999999999999999988865431           1


Q ss_pred             CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          118 SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       118 ~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ...++.+..+|+.+|.|++|.|+++||.+++..
T Consensus       143 ~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~  175 (190)
T d1fpwa_         143 ATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV  175 (190)
T ss_dssp             CCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHS
T ss_pred             hhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            123467889999999999999999999998743

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=99.48  E-value=1.1e-13  Score=97.72  Aligned_cols=110  Identities=18%  Similarity=0.294  Sum_probs=88.6

Q ss_pred             CHHHH-HHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC---------CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           43 SVSEI-EALYELFKKISSAVIDDGLINKEEFQLALFKTN---------KKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        43 ~~~~i-~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~---------~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      +++++ +.++..|..+| +  ++|.|+..||..+|...+         ......+..++..+|.+++|.|+|.||...+.
T Consensus        12 ~~~~~~~~~r~~F~~~d-~--~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~   88 (186)
T d1df0a1          12 NEEDIGDGFRRLFAQLA-G--EDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT   88 (186)
T ss_dssp             CCSCSCHHHHHHHHHHH-G--GGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHc-C--CCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Confidence            33344 35788899887 6  799999999999885421         12345688999999999999999999998886


Q ss_pred             hhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHH
Q 030405          113 IFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIES  166 (178)
Q Consensus       113 ~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~  166 (178)
                      ..       ..++.+|+.||+|++|+|+.+|++.+|+.+    |..++.+.++.
T Consensus        89 ~~-------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~----g~~~~~~~~~~  131 (186)
T d1df0a1          89 KI-------QKYQKIYREIDVDRSGTMNSYEMRKALEEA----GFKLPCQLHQV  131 (186)
T ss_dssp             HH-------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHT----TEECCHHHHHH
T ss_pred             hH-------HHHHHHHHhhCCCCCCcccHHHHHHHHHHH----HhcccHHHHHH
Confidence            54       568899999999999999999999999775    77788765543

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=99.47  E-value=1.6e-13  Score=91.38  Aligned_cols=126  Identities=18%  Similarity=0.203  Sum_probs=99.9

Q ss_pred             hhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-C---HH
Q 030405           10 HFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-E---SL   85 (178)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~---~~   85 (178)
                      .+|..+..+.++.++.     ..+............+ ..+...|..+|.+  ++|.|+..+|..++...... .   ..
T Consensus         4 ~~F~~~D~d~dG~is~-----~E~~~~l~~~~~~~~~-~~~~~~~~~~D~~--~~g~i~~~Ef~~~~~~~~~~~~~~~~~   75 (134)
T d1jfja_           4 ALFKEIDVNGDGAVSY-----EEVKAFVSKKRAIKNE-QLLQLIFKSIDAD--GNGEIDQNEFAKFYGSIQGQDLSDDKI   75 (134)
T ss_dssp             HHHHHHCTTCSSEEEH-----HHHHHHHHTTCCSSHH-HHHHHHHHHHCSS--CCSEEEHHHHHHHTTCSSCCSSHHHHH
T ss_pred             HHHHHHcCCCcCCCcH-----HHHHHHHHHcCCCCCH-HHHHHHHHHhhhc--ccccccccccccccccccccccccccc
Confidence            4566777778888888     8888887776555332 3466778888988  99999999999987653222 1   23


Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      .+..+|+.+|.+++|.|+.+++...+....     .+.+...|+.+|.|++|.|+++||.++|
T Consensus        76 ~~~~~F~~~D~~~~g~i~~~el~~~~~~~~-----~~~~~~~~~~~D~d~dG~is~~EF~~~~  133 (134)
T d1jfja_          76 GLKVLYKLMDVDGDGKLTKEEVTSFFKKHG-----IEKVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHHHHHHHCCSSSSEEEHHHHHHHHTTTT-----CHHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             cccccccccccccCCcccHHHHHHHHHhcC-----cHHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence            467899999999999999999999886542     3568889999999999999999999886

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=2.4e-13  Score=91.43  Aligned_cols=130  Identities=15%  Similarity=0.209  Sum_probs=103.5

Q ss_pred             cchhhhhhhcccCccccCCCCCCCcHHHHHhhc--CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--CCC
Q 030405            8 LKHFCVVVVNCCDADLYKQPRGLEDPEALARET--VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--KKE   83 (178)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~~~   83 (178)
                      ++.+|..+.-+..+.++.     .++.......  ..+..++..+.   ..+|.+  ++|.|+..+|..++....  ...
T Consensus         8 lk~~F~~~D~~~~G~Is~-----~e~~~~l~~~~~~~~~~~~~~~~---~~~d~~--~~g~i~~~ef~~~~~~~~~~~~~   77 (141)
T d2obha1           8 IREAFDLFDADGTGTIDV-----KELKVAMRALGFEPKKEEIKKMI---SEIDKE--GTGKMNFGDFLTVMTQKMSEKDT   77 (141)
T ss_dssp             HHHHHHTTCTTCCSEEEG-----GGHHHHHHHTTCCCCHHHHHHHH---HHHTTT--CCSEEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCeEeH-----HHHHHHHHhcCCchhHHHHHHHH---HhhccC--CCCeechHHHHHHHHHHHhhhcc
Confidence            567788888888888888     8888877764  34455555554   444666  899999999998875421  122


Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ...+..+|..+|.+++|.|+..+|..++..+.. ....+.+..+|+.+|.|++|.|+++||.++|
T Consensus        78 ~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~-~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~m  141 (141)
T d2obha1          78 KEEILKAFKLFDDDETGKISFKNLKRVAKELGE-NLTDEELQEMIDEADRDGDGEVSEQEFLRIM  141 (141)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTC-CCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCCCCccHHHHHHHHHHhCC-CCCHHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence            345688999999999999999999999998876 5678889999999999999999999999875

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.44  E-value=7.1e-13  Score=85.70  Aligned_cols=100  Identities=17%  Similarity=0.252  Sum_probs=80.0

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC--CC
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPN--SP  119 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~--~~  119 (178)
                      ++.+++..+...|   +    ..|.|+..+|..++.... .....++.+|+.+|.+++|.|+++||..++..+...  ..
T Consensus         6 ~~~~~i~~~~~~~---~----~~~~i~f~eF~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~   77 (109)
T d1rwya_           6 LSAEDIKKAIGAF---T----AADSFDHKKFFQMVGLKK-KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDL   77 (109)
T ss_dssp             SCHHHHHHHHHTT---C----STTCCCHHHHHHHHTGGG-SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred             cCHHHHHHHHHhc---c----cCCCcCHHHHHHHHcccc-CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccC
Confidence            4566655555544   3    568899999988774432 345567899999999999999999999999877542  34


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .++.+..+|+.+|.|++|.|+++||.++|.
T Consensus        78 ~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~  107 (109)
T d1rwya_          78 SAKETKTLMAAGDKDGDGKIGVEEFSTLVA  107 (109)
T ss_dssp             CHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            678899999999999999999999999884

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.44  E-value=2e-13  Score=95.71  Aligned_cols=125  Identities=12%  Similarity=0.169  Sum_probs=91.6

Q ss_pred             CCCHHHHHHHHHHHHh-hcccCCCCCcccHHHHHHHHhcC-----CCCC-----------HHHHHHHHHHHhcCCCCccc
Q 030405           41 VFSVSEIEALYELFKK-ISSAVIDDGLINKEEFQLALFKT-----NKKE-----------SLFADRVFDLFDTKHNGILD  103 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~-~d~~~~~~g~i~~~ef~~~l~~~-----~~~~-----------~~~~~~lf~~~d~~~~g~i~  103 (178)
                      ++|+.+.+++...|.. +|.+  ++|.|+..||..++...     ....           ......++...+.+++|.|+
T Consensus         1 ~lt~~q~~~i~~~F~~~~D~d--~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~   78 (185)
T d2sasa_           1 GLNDFQKQKIKFTFDFFLDMN--HDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVS   78 (185)
T ss_dssp             CCCHHHHHHHHHHHHHHTCTT--CSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEE
T ss_pred             CcCHHHHHHHHHHHHHhhcCC--CCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEe
Confidence            4788899999999997 5999  99999999998887431     1111           11134567778889999999


Q ss_pred             HHHHHHHHHhhCCC--------CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHh
Q 030405          104 FEEFARALSIFHPN--------SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVLS  173 (178)
Q Consensus       104 ~~ef~~~~~~~~~~--------~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~  173 (178)
                      +++|...+......        ......+..+|+.+|.|++|+|+.+||+.++.++      .+++++++.++..+-.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~------~l~~~~~~~~f~~~D~  150 (185)
T d2sasa_          79 WEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNF------QLQCADVPAVYNVITD  150 (185)
T ss_dssp             HHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSS------CCCCSSHHHHHHHHHT
T ss_pred             eeHhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHc------CCCHHHHHHHHHHcCC
Confidence            99999887643211        1223558889999999999999999999987543      3566666655555443

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=99.43  E-value=9.6e-13  Score=92.66  Aligned_cols=125  Identities=16%  Similarity=0.172  Sum_probs=86.8

Q ss_pred             cCC-CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-----CCCCCH-HH-----HHHHHHHHhcCCCCcccHHHH
Q 030405           40 TVF-SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-----TNKKES-LF-----ADRVFDLFDTKHNGILDFEEF  107 (178)
Q Consensus        40 ~~~-~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-----~~~~~~-~~-----~~~lf~~~d~~~~g~i~~~ef  107 (178)
                      +.| +++++++++..|..+|.+  ++|+|+..||..++..     .+.... ..     .+..+...+....+.++++++
T Consensus         5 ~~f~~~~~i~r~k~~F~~~D~d--~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~   82 (189)
T d1qv0a_           5 TDFDNPRWIKRHKHMFDFLDIN--GNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQF   82 (189)
T ss_dssp             CCTTCHHHHHHHHHHHHHHCTT--CSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHcCC--CCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHH
Confidence            446 678999999999999999  9999999999876532     222221 11     223345556677788999999


Q ss_pred             HHHHHhhCC----------CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 030405          108 ARALSIFHP----------NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK  170 (178)
Q Consensus       108 ~~~~~~~~~----------~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~  170 (178)
                      ...+.....          .....+.+..+|+.+|.|++|+|+.+||..++..+    |..+++++++.+++.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~----g~~~~~~~~~~lf~~  151 (189)
T d1qv0a_          83 LDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKIS----GISPSQEDCEATFRH  151 (189)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHH----SSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhc----CCCCCHHHHHHHHHH
Confidence            887754221          01123456678999999999999999999999887    888999887655443

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.43  E-value=8.2e-13  Score=89.50  Aligned_cols=133  Identities=12%  Similarity=0.110  Sum_probs=104.4

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcC--CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-----
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-----   78 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-----   78 (178)
                      ..++.+|..+.-+.++.++.     .++....+..+  ++.+++..+.....  +..  .+|.++..+|..++..     
T Consensus         2 ~~~k~~F~~~D~d~~G~I~~-----~el~~~l~~lg~~~s~~ei~~l~~~~~--~~~--~~~~i~~~ef~~~~~~~~~~~   72 (146)
T d1m45a_           2 RANKDIFTLFDKKGQGAIAK-----DSLGDYLRAIGYNPTNQLVQDIINADS--SLR--DASSLTLDQITGLIEVNEKEL   72 (146)
T ss_dssp             CCCTTCHHHHCTTCCSEEEG-----GGHHHHHHHTTCCCCHHHHHHHHHC----CC----CCEEEHHHHHHHHHHTHHHH
T ss_pred             hHHHHHHHHHcCCCcCCCCH-----HHHHHHHHHcCCchhHHHHhhhhcccc--ccc--cccccccchhhhhhhhhcccc
Confidence            46788999999999999988     88888877744  46777666654322  333  5689999999987643     


Q ss_pred             --CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           79 --TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        79 --~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                        ........+..+|+.+|.+++|.|+.++|..++..+.. ..+++.+..+|..+|.|++|.|+++||.+.+
T Consensus        73 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~-~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i  143 (146)
T d1m45a_          73 DATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGE-KLTDAEVDELLKGVEVDSNGEIDYKKFIEDV  143 (146)
T ss_dssp             HGGGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTT-CCCHHHHHHHHTTCCCCTTSEEEHHHHHHHH
T ss_pred             cccccchHHHHHHHHHhhccccccccchhhhhhhhcccCC-cchHHHHHHHHHHhCCCCCCcEEHHHHHHHH
Confidence              11222344688899999999999999999999998876 5678889999999999999999999998765

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=8e-15  Score=96.15  Aligned_cols=104  Identities=18%  Similarity=0.242  Sum_probs=86.4

Q ss_pred             hcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccC-CCCCcccHHHHHHHHhc---CCCCCHHHHHHHH
Q 030405           16 VNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAV-IDDGLINKEEFQLALFK---TNKKESLFADRVF   91 (178)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~-~~~g~i~~~ef~~~l~~---~~~~~~~~~~~lf   91 (178)
                      ||+..+.++|     +.+.++++.++|+..+++.|++.|....... ..+|.|+..+|+.++..   .+...+..++++|
T Consensus         1 Mg~~~s~l~p-----~~l~~L~~~T~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF   75 (118)
T d1tuza_           1 MAKERGLISP-----SDFAQLQKYMEYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALF   75 (118)
T ss_dssp             CCCCCSCSCH-----HHHHHHHHHHHHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHH
T ss_pred             CCcccCCCCH-----HHHHHHHHHcCCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHH
Confidence            7889999999     9999999999999999999999997543110 05789999999998754   3344578899999


Q ss_pred             HHHhcCCC--------CcccHHHHHHHHHhhCCCCChhHHHH
Q 030405           92 DLFDTKHN--------GILDFEEFARALSIFHPNSPIDDKIE  125 (178)
Q Consensus        92 ~~~d~~~~--------g~i~~~ef~~~~~~~~~~~~~~e~~~  125 (178)
                      +.||.+++        |.|+|.||+.+++.+.+ +.++++++
T Consensus        76 ~~FD~~~d~~~~~~~~g~I~f~efv~~LS~l~~-G~~eeKL~  116 (118)
T d1tuza_          76 QSFETGHCLNETNVTKDVVCLNDVSCYFSLLEG-GRPEDKLE  116 (118)
T ss_dssp             HHSCCCCCTTCCCCCSCCEEHHHHHHHHHHHHS-CCCSCCCC
T ss_pred             HHHccccccccccCCCceeeHHHHHHHHHHHcC-CCHHHhhc
Confidence            99999876        88999999999998886 67776654

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.43  E-value=7.4e-13  Score=81.06  Aligned_cols=69  Identities=23%  Similarity=0.337  Sum_probs=59.2

Q ss_pred             CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           43 SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        43 ~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      |+++++.+++.|..+|.+  ++|.|+..+|..++...+......+..+|+.+|.+++|.|+|+||+.++..
T Consensus         1 T~ee~~e~~~~F~~~D~d--~~G~I~~~El~~~l~~lg~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~   69 (81)
T d2opoa1           1 TPQDIADRERIFKRFDTN--GDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA   69 (81)
T ss_dssp             CHHHHHHHHHHHHHHCTT--CSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHCCC--CCCCCcHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            578889999999999999  999999999999887765556667889999999999999999999987754

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=4.5e-13  Score=94.52  Aligned_cols=98  Identities=19%  Similarity=0.259  Sum_probs=77.9

Q ss_pred             HHHHHhhcccCCCCCcccHHHHHHHHhc-CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC-----------CC
Q 030405           51 YELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHP-----------NS  118 (178)
Q Consensus        51 ~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~-----------~~  118 (178)
                      ...|+.+|.+  ++|.|+..+|..++.. ........++.+|+.+|.+++|.|+++|+..++..+..           ..
T Consensus        63 ~~if~~~d~~--~dg~I~~~EF~~~l~~~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~  140 (187)
T d1g8ia_          63 TFVFNVFDEN--KDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEEN  140 (187)
T ss_dssp             HHHHHHHCTT--CSSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGS
T ss_pred             HHHHHHhCcC--CCCCCcHHHHHHHHHHhccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhc
Confidence            4467777888  9999999999988755 22333556788999999999999999999887753310           12


Q ss_pred             ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ..++.+..+|+.+|.|++|.|+.+||.+++..
T Consensus       141 ~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~  172 (187)
T d1g8ia_         141 TPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA  172 (187)
T ss_dssp             SHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            33466889999999999999999999998864

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.42  E-value=8.9e-13  Score=84.92  Aligned_cols=102  Identities=18%  Similarity=0.203  Sum_probs=81.2

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC--
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPN--  117 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~--  117 (178)
                      .++|..+|..+...   .+    ..|.|+..+|...+... ......++.+|+.+|.+++|.|+..||..++..+...  
T Consensus         3 ~gls~~di~~~~~~---~~----~~gsi~~~eF~~~~~l~-~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~   74 (107)
T d2pvba_           3 AGLKDADVAAALAA---CS----AADSFKHKEFFAKVGLA-SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSAR   74 (107)
T ss_dssp             TTSCHHHHHHHHHH---TC----STTCCCHHHHHHHHTGG-GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSC
T ss_pred             CCCCHHHHHHHHHh---cc----CCCCcCHHHHHHHHhcc-cCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccc
Confidence            35787786655433   33    45679999999876532 2344567999999999999999999999998877432  


Q ss_pred             CChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405          118 SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus       118 ~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      ..+++.++.+|+.+|.|++|.|+++||..+|+
T Consensus        75 ~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m~  106 (107)
T d2pvba_          75 ALTDAETKAFLADGDKDGDGMIGVDEFAAMIK  106 (107)
T ss_dssp             CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            35678899999999999999999999999875

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.42  E-value=1.1e-12  Score=88.66  Aligned_cols=133  Identities=17%  Similarity=0.153  Sum_probs=102.6

Q ss_pred             ccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC----C
Q 030405            7 GLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT----N   80 (178)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~----~   80 (178)
                      -++.+|..+..+.++.++.     ..+....+..++  +..++..+...+.. +..  ++|.|+..+|..++...    .
T Consensus         5 elke~F~~~D~d~~G~I~~-----~el~~~l~~lg~~~~~~e~~~~~~~~~~-d~~--~~g~i~~~eF~~~~~~~~~~~~   76 (145)
T d2mysc_           5 DFKEAFLLFDRTGDAKITA-----SQVGDIARALGQNPTNAEINKILGNPSK-EEM--NAAAITFEEFLPMLQAAANNKD   76 (145)
T ss_pred             HHHHHHHHHcCCCCCeECH-----HHHHHHHHHhhhcchhhhhHHHHHHHhh-ccc--ccCccchhHHHHHHhhhhhccc
Confidence            3677888888888999888     888887766544  55566655555432 333  67899999999887541    1


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           81 KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        81 ~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      ......+..+|+.+|.+++|.|+.+||..++..+.. ..+.+.+..+++. |.|++|.|+++||.+.|.
T Consensus        77 ~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~e~~~l~~~-~~d~dG~I~y~eF~~~ll  143 (145)
T d2mysc_          77 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGE-KMTEEEVEELMKG-QEDSNGCINYEAFVKHIM  143 (145)
T ss_pred             cchHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCC-CCCHHHHHHHHhh-cCCCCCeEEHHHHHHHHh
Confidence            223345788999999999999999999999998765 5677888899985 789999999999988774

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.41  E-value=9.5e-13  Score=90.58  Aligned_cols=132  Identities=19%  Similarity=0.274  Sum_probs=102.7

Q ss_pred             cchhhhhhhcccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC-----C
Q 030405            8 LKHFCVVVVNCCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT-----N   80 (178)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~-----~   80 (178)
                      ++.+|..+.-+..+.++.     ..+..+....+.  +...+.   ..+..+|.+  ++|.++..+|...+...     .
T Consensus        22 l~~~F~~~D~d~~G~Is~-----~el~~~l~~~~~~~~~~~~~---~~~~~~d~~--~~~~~~~~e~~~~~~~~~~~~~~   91 (162)
T d1topa_          22 FKAAFDMFDADGGGDIST-----KELGTVMRMLGQNPTKEELD---AIIEEVDED--GSGTIDFEEFLVMMVRQMKEDAK   91 (162)
T ss_dssp             HHHHHHTTTCSCSSEEEG-----GGHHHHHHHTTCCCCHHHHH---HHHHHHCTT--SCCEEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCeEcH-----HHHHHHHhccCCchhHHHHH---hhhheeccC--CCCCeeeehhhhhhhhhhhhhcc
Confidence            567778888888888888     888887766544  444544   455566777  89999999987764321     1


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           81 KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        81 ~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .........+|+.+|.+++|.|+..+|..++..... ....+.+..+|+.+|.|++|.|+++||.++|+.
T Consensus        92 ~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~-~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~  160 (162)
T d1topa_          92 GKSEEELANCFRIFDKNADGFIDIEELGEILRATGE-HVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG  160 (162)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTC-CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred             cCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCC-CCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence            112234577899999999999999999999988766 566788999999999999999999999999853

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.41  E-value=2.1e-12  Score=87.10  Aligned_cols=129  Identities=16%  Similarity=0.193  Sum_probs=102.6

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNK   81 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~   81 (178)
                      .-++.+|..+..+..+.++.     ..+..+.+..+.  +..++..+   +    .+  ++|.|+..+|..++..  ...
T Consensus         7 ~e~~~~F~~~D~d~~G~I~~-----~el~~~l~~lg~~~~~~el~~~---~----~~--~~~~i~~~eF~~~~~~~~~~~   72 (142)
T d1wdcb_           7 QEMKEAFSMIDVDRDGFVSK-----EDIKAISEQLGRAPDDKELTAM---L----KE--APGPLNFTMFLSIFSDKLSGT   72 (142)
T ss_dssp             HHHHHHHHHHCTTCSSSCCH-----HHHHHHHHHHSSCCCHHHHHHH---H----TT--SSSCCCHHHHHHHHHHHTCSC
T ss_pred             HHHHHHHHHHcCCCCCcCCh-----HHHHHHHHHhhcCCCHHHHHHH---H----Hh--ccCcccccccccccccccccc
Confidence            34667788888888888877     888887776444  45554443   3    23  6899999999998755  334


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .....+..+|+.+|.+++|.|+.++|..++..+.. ..+++++..+|+.+|.| +|.|+++||.++|+.
T Consensus        73 ~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~-~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~  139 (142)
T d1wdcb_          73 DSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGD-NFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG  139 (142)
T ss_dssp             CCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSS-CCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred             chhhhHHHhhhhhcccCCCcccHHHHHHHHHHccc-cCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHhc
Confidence            44566889999999999999999999999998876 56788899999999998 599999999999853

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.40  E-value=1.8e-12  Score=87.73  Aligned_cols=134  Identities=15%  Similarity=0.204  Sum_probs=105.5

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--CCC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--KKE   83 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~~~   83 (178)
                      ..++.+|..+..+..+.+++     ..+.......+....+ ..+...+...+.+  +.+.++..+|..++....  ...
T Consensus        10 ~~l~~~F~~~D~d~~G~i~~-----~e~~~~l~~~g~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~   81 (146)
T d1lkja_          10 AEFKEAFALFDKDNNGSISS-----SELATVMRSLGLSPSE-AEVNDLMNEIDVD--GNHQIEFSEFLALMSRQLKSNDS   81 (146)
T ss_dssp             HHHHHHHHHHCCSSSSEEEH-----HHHHHHHHHHTCCCCH-HHHHHHHHHHCSS--SCCEEEHHHHHHHHHHHTCCCCH
T ss_pred             HHHHHHHHHHCCCCCCcEeH-----HHHHHHHHhcCCCCCH-HHHHHHHHHhccC--CcccccHHHHHHHHHHhhccccH
Confidence            34677888888888888888     8888866665544322 2445556666666  788999999988875522  223


Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      ...+..+|+.+|.+++|.|+.+||..++..+.. ..+++.+..+|+.+| |++|.|+++||..+|.
T Consensus        82 ~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m~  145 (146)
T d1lkja_          82 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGE-KLTDAEVDDMLREVS-DGSGEINIQQFAALLS  145 (146)
T ss_dssp             HHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTC-SCCHHHHHHHHHHHC-CSSSEEEHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC-cccHHHHHHHHHhcc-CCCCeEeHHHHHHHhC
Confidence            455788999999999999999999999998887 677888999999999 9999999999999873

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=99.40  E-value=3.5e-12  Score=88.51  Aligned_cols=120  Identities=18%  Similarity=0.227  Sum_probs=82.6

Q ss_pred             CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc----CCC-CCHH-----HHHHHHHHH--hcCCCCcccHHHHHHH
Q 030405           43 SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK----TNK-KESL-----FADRVFDLF--DTKHNGILDFEEFARA  110 (178)
Q Consensus        43 ~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~----~~~-~~~~-----~~~~lf~~~--d~~~~g~i~~~ef~~~  110 (178)
                      |.-++++|+..|..+|.+  ++|.|+..+|..++..    ... ....     .....+..+  +.++++.|++++|+..
T Consensus         1 s~~~~~~l~~~F~~~D~d--~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~   78 (174)
T d2scpa_           1 SDLWVQKMKTYFNRIDFD--KDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINS   78 (174)
T ss_dssp             CHHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHccC--CCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHH
Confidence            345788999999999999  9999999999887643    111 1111     122233332  5566788999999988


Q ss_pred             HHhhCCCCCh----hHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 030405          111 LSIFHPNSPI----DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDK  170 (178)
Q Consensus       111 ~~~~~~~~~~----~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~  170 (178)
                      +.........    .+.+..+|+.+|.|++|.|+.+||..+++.+      .++.+++..+++.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~------~~~~~~~~~~f~~  136 (174)
T d2scpa_          79 MKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML------GLDKTMAPASFDA  136 (174)
T ss_dssp             HHHHTSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHT------TCCGGGHHHHHHH
T ss_pred             HHhhhcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHH------hhhhHHHHHHHhh
Confidence            8766543222    2346778999999999999999999887654      3555555544433

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=99.40  E-value=1e-12  Score=92.65  Aligned_cols=91  Identities=20%  Similarity=0.243  Sum_probs=60.0

Q ss_pred             HHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHH
Q 030405           48 EALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFS  127 (178)
Q Consensus        48 ~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~  127 (178)
                      +.+...|..+|++  ++|.|+..++..++...+...+.....++..+|.+++|.|+|++|+.++..+       +.+..+
T Consensus        91 ~~~~~~F~~~D~d--~sG~I~~~El~~~l~~~g~~~~~~~~~~~~~~d~d~dg~I~f~eFi~~~~~l-------~~~~~~  161 (186)
T d1df0a1          91 QKYQKIYREIDVD--RSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRL-------EILFKI  161 (186)
T ss_dssp             HHHHHHHHHHCTT--CCSCEEGGGHHHHHHHTTEECCHHHHHHHHHHHCCSTTEECHHHHHHHHHHH-------HHHHHH
T ss_pred             HHHHHHHHhhCCC--CCCcccHHHHHHHHHHHHhcccHHHHHHHHHHHcCCCCeEeHHHHHHHHHHH-------HHHHHH
Confidence            4566677777777  7777777777777766444433344556666777777777777777766543       456677


Q ss_pred             HHhhCCCCCCce--eHHHHHHH
Q 030405          128 FQLYDLKQQGFI--ERQEVKQM  147 (178)
Q Consensus       128 F~~~D~d~~G~I--~~~e~~~~  147 (178)
                      |+.+|++++|+|  +.+||..+
T Consensus       162 F~~~D~~~~G~i~l~~~ef~~~  183 (186)
T d1df0a1         162 FKQLDPENTGTIQLDLISWLSF  183 (186)
T ss_dssp             HHHHCTTCCSEEEEEHHHHHHH
T ss_pred             HHHhCCCCCCcEEecHHHHHHH
Confidence            777777777766  45555543

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.39  E-value=1.5e-12  Score=91.17  Aligned_cols=99  Identities=21%  Similarity=0.279  Sum_probs=79.3

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHHHhcC-CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC-----------
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLALFKT-NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPN-----------  117 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~-~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~-----------  117 (178)
                      ....|..+|.+  ++|.|+..+|..++... .......++.+|+.+|.+++|.|+..||..++......           
T Consensus        61 ~~~lf~~~d~~--~~g~i~~~eFl~~~~~~~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~  138 (181)
T d1bjfa_          61 AEHVFRTFDAN--GDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDE  138 (181)
T ss_dssp             HHHHHHHHCSS--CSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGG
T ss_pred             HHHHHHhcCCC--CCCcEeHHHHHHHHHHHhhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCccc
Confidence            34566777888  89999999999887552 33345567889999999999999999999988754321           


Q ss_pred             CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          118 SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       118 ~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ...++.+..+|+.+|.|++|.|+++||.+++..
T Consensus       139 ~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~  171 (181)
T d1bjfa_         139 STPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS  171 (181)
T ss_dssp             SSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            223457889999999999999999999999865

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=3.8e-12  Score=88.13  Aligned_cols=92  Identities=16%  Similarity=0.206  Sum_probs=74.6

Q ss_pred             HHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHH
Q 030405           46 EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKI  124 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~  124 (178)
                      .++.++..|..+|++  ++|.|+..+|+.++...+.. .+..++.+++.+|.  +|.|+|++|+.++..+       +.+
T Consensus        68 ~~~~~~~~F~~fD~d--~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d~--~g~i~~~eFi~~~~~l-------~~~  136 (165)
T d1k94a_          68 ALNAWKENFMTVDQD--GSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFDDYVACCVKL-------RAL  136 (165)
T ss_dssp             HHHHHHHHHHHHCTT--CCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHCB--TTBCBHHHHHHHHHHH-------HHH
T ss_pred             ccchhHHHHHHhCCC--CCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcCC--CCcCcHHHHHHHHHHH-------HHH
Confidence            357788999999999  99999999999998775543 45678889998865  5789999999888665       457


Q ss_pred             HHHHHhhCCCCCCce--eHHHHHHHH
Q 030405          125 EFSFQLYDLKQQGFI--ERQEVKQMV  148 (178)
Q Consensus       125 ~~~F~~~D~d~~G~I--~~~e~~~~l  148 (178)
                      ..+|+.+|++++|+|  +.+||..+.
T Consensus       137 ~~~F~~~D~d~~G~i~l~~~ef~~~~  162 (165)
T d1k94a_         137 TDFFRKRDHLQQGSANFIYDDFLQGT  162 (165)
T ss_dssp             HHHHHTTCTTCCSEEEEEHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcEEecHHHHHHHH
Confidence            889999999999977  578887664

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.39  E-value=8.4e-13  Score=94.09  Aligned_cols=125  Identities=14%  Similarity=0.231  Sum_probs=89.5

Q ss_pred             cCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-CCCCCHHHHHHHHHHHhcC
Q 030405           19 CDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTK   97 (178)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~~~~~~~~~lf~~~d~~   97 (178)
                      .++.++.     ..+..+..........-..+...|..+|.+  ++|.|+..+|..++.. ........++.+|+.+|.+
T Consensus        39 ~~G~is~-----~EF~~~l~~~~~~~~~~~~~~~if~~~D~~--~~G~I~f~EF~~~~~~~~~~~~~~~l~~~F~~~D~d  111 (201)
T d1omra_          39 PSGRITR-----QEFQTIYSKFFPEADPKAYAQHVFRSFDAN--SDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVD  111 (201)
T ss_dssp             TTSEEEH-----HHHHHHHHHHCTTSCCHHHHHHHHHTTTSC--SSSEEEHHHHHHHHHHHHSSCGGGSHHHHHHHHCTT
T ss_pred             cCCCccH-----HHHHHHHHHhcCCCCHHHHHHHHHHHhccC--CCCeEeehhHHHHHHhhcccchHHHHHHHHHHHccC
Confidence            3555655     666665444322111122345678888988  9999999999988755 2223344578999999999


Q ss_pred             CCCcccHHHHHHHHHhhCCCC-------------ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           98 HNGILDFEEFARALSIFHPNS-------------PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        98 ~~g~i~~~ef~~~~~~~~~~~-------------~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ++|.|++.||..++.......             ..++.+..+|+.+|.|++|.|+++||...+..
T Consensus       112 ~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~  177 (201)
T d1omra_         112 GNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLA  177 (201)
T ss_dssp             CSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred             CCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            999999999998876543211             12345778999999999999999999987753

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=99.39  E-value=5.1e-12  Score=88.59  Aligned_cols=121  Identities=17%  Similarity=0.122  Sum_probs=78.1

Q ss_pred             CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-----CCCCCHH-H-----HHHHHHHHhcCCCCcccHHHHHHHH
Q 030405           43 SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-----TNKKESL-F-----ADRVFDLFDTKHNGILDFEEFARAL  111 (178)
Q Consensus        43 ~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-----~~~~~~~-~-----~~~lf~~~d~~~~g~i~~~ef~~~~  111 (178)
                      ++.++++++..|..+|.+  ++|.|+..||..++..     .+..... .     ....+........+.+++.+|+..+
T Consensus         7 ~p~~~~~~k~~F~~~D~d--~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (187)
T d1uhka1           7 NPRWIGRHKHMFNFLDVN--HNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGW   84 (187)
T ss_dssp             CHHHHHHHHHHHHHHCTT--CCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCC--CCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHH
Confidence            467789999999999999  9999999999876533     2222211 1     1222333344445667777776654


Q ss_pred             HhhCC----------CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHH
Q 030405          112 SIFHP----------NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIID  169 (178)
Q Consensus       112 ~~~~~----------~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~  169 (178)
                      .....          .......++.+|+.+|.|++|.|+.+||+.+|..+    |..+++++++.+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~----g~~~~~~~~~~lf~  148 (187)
T d1uhka1          85 KKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAA----GIIQSSEDCEETFR  148 (187)
T ss_dssp             HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH----TSCCSHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHh----CCCccHHHHHHHHH
Confidence            43211          01122346678888888888888888888887766    66777776655444

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.38  E-value=1.4e-12  Score=89.23  Aligned_cols=131  Identities=19%  Similarity=0.296  Sum_probs=98.6

Q ss_pred             cchhhhhhhccc-CccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-----C
Q 030405            8 LKHFCVVVVNCC-DADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-----T   79 (178)
Q Consensus         8 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-----~   79 (178)
                      ++.+|..+.... ++.++.     ..+....+..++  +..++.   ..+...+.+  +.|.++..++...+..     .
T Consensus        16 l~~~F~~~D~d~~dG~I~~-----~e~~~~l~~lg~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   85 (156)
T d1dtla_          16 FKAAFDIFVLGAEDGSIST-----KELGKVMRMLGQNPTPEELQ---EMIDEVDED--GSGTVDFDEFLVMMVRSMKDDS   85 (156)
T ss_dssp             HHHHHHHHTTTCGGGSBCH-----HHHHHHHHHTTCCCCHHHHH---HHHHHHCTT--SSSSBCHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHcCCCCCCeECH-----HHHHHHHHHcCCCCCHHHHH---HHHHHhhcc--CCCccchhhhhhhhhhcccccc
Confidence            456677776653 578877     888877766544  454544   445556666  8899999988775433     1


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           80 NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        80 ~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .......+..+|+.+|.+++|.|+.++|..++..+.. ..+++++..+|+.+|.|++|.|+++||.++|+
T Consensus        86 ~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~-~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~  154 (156)
T d1dtla_          86 KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGE-TITEDDIEELMKDGDKNNDGRIDYDEFLEFMK  154 (156)
T ss_dssp             --CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC---CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCC-CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence            1233455788999999999999999999998877766 57788999999999999999999999999985

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.38  E-value=4.4e-12  Score=88.98  Aligned_cols=130  Identities=15%  Similarity=0.138  Sum_probs=100.7

Q ss_pred             cchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHH
Q 030405            8 LKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFA   87 (178)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~   87 (178)
                      +..+|..+..+..+.++.     .++..+.+...........+...+..+|.+  ++|.|+..+|..++...     ...
T Consensus        21 L~~iF~~~D~d~~G~Is~-----~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d--~~g~i~~~EFl~~~~~~-----~~~   88 (181)
T d1hqva_          21 LWNVFQRVDKDRSGVISD-----NELQQALSNGTWTPFNPVTVRSIISMFDRE--NKAGVNFSEFTGVWKYI-----TDW   88 (181)
T ss_dssp             HHHHHHHHCTTCCSSBCH-----HHHHHHCCCSSSSCCCHHHHHHHHHHHCCS--SSSSBCHHHHHHHHHHH-----HHH
T ss_pred             HHHHHHHHcCCCCCcCcH-----HHHHHHHHHcCCCcccHHHHHHHhhccccc--cccchhhhHHHhhhhhc-----ccc
Confidence            456677777777788777     777776554433222223455556667887  89999999999877442     235


Q ss_pred             HHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           88 DRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        88 ~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      +.+|+.+|.+++|.|+.++|..++..... ...++.+..+++.+|.+++|.|+++||.+++..
T Consensus        89 ~~~f~~~D~~~~G~i~~~el~~~l~~~~~-~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~  150 (181)
T d1hqva_          89 QNVFRTYDRDNSGMIDKNELKQALSGFGY-RLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV  150 (181)
T ss_dssp             HHHHHHHCTTCCSSBCHHHHHHHHHHHTB-CCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred             ccccccccccccchhhhHHHHHHHHHcCC-cchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            78999999999999999999999988776 567788999999999999999999999888754

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=99.38  E-value=6.3e-12  Score=88.79  Aligned_cols=115  Identities=17%  Similarity=0.203  Sum_probs=83.2

Q ss_pred             hhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHH
Q 030405           11 FCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADR   89 (178)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~   89 (178)
                      ++..+..+.++.+.-     ..+..+..       .++.++..|..+|++  ++|.|+..||..++...+.. ++...+.
T Consensus        68 li~~~D~d~~G~i~~-----~EF~~l~~-------~~~~~~~~F~~~D~d--~sG~i~~~El~~~l~~~g~~~~~~~~~~  133 (188)
T d1qxpa2          68 MVNLMDRDGNGKLGL-----VEFNILWN-------RIRNYLTIFRKFDLD--KSGSMSAYEMRMAIEAAGFKLPCQLHQV  133 (188)
T ss_dssp             HHHHHCC--CCCCCS-----SSHHHHHH-------HHHHHHHHHGGGCTT--CCSCCBHHHHHHHHHHTTEECCHHHHHH
T ss_pred             HHHHhcCCCCCcccH-----HHHHHHHh-------hhHHHHHHHHHhCCC--CCCEECHHHHHHHHHHhhhcCCHHHHHH
Confidence            334444455555544     55555443       357888999999999  99999999999999875544 3444555


Q ss_pred             HHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCce--eHHHHHHH
Q 030405           90 VFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFI--ERQEVKQM  147 (178)
Q Consensus        90 lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I--~~~e~~~~  147 (178)
                      ++.. +.+++|.|+|++|+.++..+       ..+..+|+.+|++++|.|  +.+||..+
T Consensus       134 l~~~-~~~~dg~i~f~eFi~~~~~l-------~~~~~~F~~~D~~~~G~i~l~~~efl~~  185 (188)
T d1qxpa2         134 IVAR-FADDELIIDFDNFVRCLVRL-------EILFKIFKQLDPENTGTIQLDLISWLSF  185 (188)
T ss_dssp             HHHH-TSCSSSBCCHHHHHHHHHHH-------HHHHHHHHHSCSSCCSCEEEEHHHHHHH
T ss_pred             HHHH-hcCCCCcCCHHHHHHHHHHH-------HHHHHHHHHhCCCCCCeEEeeHHHHHHH
Confidence            5655 56889999999999988765       347789999999999977  66666543

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.36  E-value=1.3e-12  Score=84.23  Aligned_cols=100  Identities=20%  Similarity=0.255  Sum_probs=78.6

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC--CC
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPN--SP  119 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~--~~  119 (178)
                      ++.++|..+...+   +    ..|.+++.+|...+.- .......++.+|+.+|.+++|.|+++||..++..+...  ..
T Consensus         6 ls~~dI~~~l~~~---~----~~~s~~~~~F~~~~~~-~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l   77 (108)
T d1rroa_           6 LSAEDIAAALQEC---Q----DPDTFEPQKFFQTSGL-SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL   77 (108)
T ss_dssp             SCHHHHHHHHHHT---C----STTCCCHHHHHHHHSG-GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred             CCHHHHHHHHHhc---c----cCCCccHHHHHHHHcc-CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCC
Confidence            6677766654443   2    5678999999765533 22344557899999999999999999999998876432  34


Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      +++.++.+|+.+|.|++|.|+++||..+|+
T Consensus        78 ~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (108)
T d1rroa_          78 TESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             CHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             CHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence            578899999999999999999999999874

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.36  E-value=1.1e-12  Score=77.29  Aligned_cols=63  Identities=27%  Similarity=0.450  Sum_probs=56.6

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ++++|+.+|.+++|.|+..||..++..+.. ..+++.++.+|+.+|.|++|.|+++||..+|.+
T Consensus         3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~-~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~   65 (67)
T d1tiza_           3 AKRVFEKFDKNKDGKLSLDEFREVALAFSP-YFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCT-TSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCcCcCcHHHHHHHHHHhcc-ccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            578999999999999999999999988876 567788999999999999999999999998865

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.35  E-value=3.3e-12  Score=89.68  Aligned_cols=122  Identities=23%  Similarity=0.256  Sum_probs=89.4

Q ss_pred             CccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--CCCCHHHHHHHHHHHhcC
Q 030405           20 DADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT--NKKESLFADRVFDLFDTK   97 (178)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~~~~~~~~~~lf~~~d~~   97 (178)
                      ++.++.     ..+.......+.....  .....|..+|.+  ++|.|+..+|..++...  .......++.+|+.+|.+
T Consensus        33 ~G~i~~-----~ef~~~l~~~~~~~~~--~~~~lf~~~d~~--~dg~I~f~EFl~~l~~~~~~~~~~~~~~~~F~~~D~d  103 (183)
T d2zfda1          33 DGLINK-----EEFQLALFKTNKKESL--FADRVFDLFDTK--HNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLK  103 (183)
T ss_dssp             SSSBCH-----HHHHHHHHSCSSCCCH--HHHHHHHHHCSS--CSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTT
T ss_pred             CCcCcH-----HHHHHHHHhcCCCCCH--HHHHHHHHHccC--CCCcCcHHHHHHHHHhhhccCcHHHHHHHhhcccccC
Confidence            445555     6666655554444332  235668888888  99999999999887553  233455678899999999


Q ss_pred             CCCcccHHHHHHHHHhhC---CCCCh----hHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           98 HNGILDFEEFARALSIFH---PNSPI----DDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        98 ~~g~i~~~ef~~~~~~~~---~~~~~----~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ++|.|+.+|+..++....   .....    ++.+..+|+.+|.|++|.|+++||..++..
T Consensus       104 ~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~  163 (183)
T d2zfda1         104 QQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR  163 (183)
T ss_dssp             SSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            999999999988765431   10112    234677999999999999999999999865

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.35  E-value=2e-12  Score=90.37  Aligned_cols=114  Identities=18%  Similarity=0.228  Sum_probs=82.0

Q ss_pred             CcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-CCCCCHHHHHHHHHHHhcCCCCcccHHHH
Q 030405           31 EDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILDFEEF  107 (178)
Q Consensus        31 ~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~~~~~~~~~lf~~~d~~~~g~i~~~ef  107 (178)
                      ..+.........  ++..  .+...|..+|.+  ++|.|+..+|..++.. ........++.+|+.+|.+++|.|++.|+
T Consensus        34 ~ef~~~l~~~~~~~~~~~--~~~~lf~~~D~~--~~g~I~~~EFl~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~  109 (178)
T d1s6ca_          34 ETFKQIYAQFFPHGDAST--YAHYLFNAFDTT--QTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM  109 (178)
T ss_dssp             HHHHHHHHHHSTTSCCHH--HHHHHHHHHCTT--CSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred             HHHHHHHHHhCCCCCHHH--HHHHHHHHHCCC--CCCcccHHHHHHHHHHHhccchHHHHHHHHHhhccCCCCeecHHHH
Confidence            666665544322  2222  234567777888  9999999999888744 22334556789999999999999999999


Q ss_pred             HHHHHhhC---C--------CCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405          108 ARALSIFH---P--------NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus       108 ~~~~~~~~---~--------~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ...+..+.   .        ....++.+..+|+.+|.|++|.|+.+||.+++
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~~i  161 (178)
T d1s6ca_         110 MDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESC  161 (178)
T ss_dssp             HHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHT
T ss_pred             HHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            87665321   1        01224557789999999999999999999986

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=2.8e-12  Score=88.58  Aligned_cols=134  Identities=13%  Similarity=0.108  Sum_probs=99.1

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC--CCC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN--KKE   83 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~--~~~   83 (178)
                      ..+.++|..+.-+..+.++.     .++..+.....-.     .+...|..+|.+  ++|.|+..+|..++....  ...
T Consensus        16 ~~l~~~F~~~D~d~~G~I~~-----~E~~~~~~~~~~~-----~~~~l~~~~d~~--~~g~i~~~EFl~~~~~~~~~~~~   83 (165)
T d1auib_          16 KRLGKRFKKLDLDNSGSLSV-----EEFMSLPELQQNP-----LVQRVIDIFDTD--GNGEVDFKEFIEGVSQFSVKGDK   83 (165)
T ss_dssp             HHHHHHHHHHCTTCCSEECH-----HHHTTSHHHHTCT-----THHHHHHHHCTT--CSSSEEHHHHHHHHGGGCTTCCH
T ss_pred             HHHHHHHHHHCCCCCCCCcH-----HHHHHhhhccCCH-----HHHHHHHHHccc--cchhhhhhhhhhhccccccchhh
Confidence            45667777777777788777     5555543332211     133467777888  999999999999886632  333


Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCCh----hHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI----DDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~----~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ...+..+|+.+|.+++|.|+.+++..++.........    +..+..+|+.+|.|++|.|+.+||.++|..+
T Consensus        84 ~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~~~  155 (165)
T d1auib_          84 EQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL  155 (165)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHGGG
T ss_pred             HHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHhcC
Confidence            4567899999999999999999999988654332222    3457789999999999999999999998653

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.35  E-value=9.5e-12  Score=84.75  Aligned_cols=133  Identities=17%  Similarity=0.170  Sum_probs=102.6

Q ss_pred             cccchhhhhhh--cccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc---
Q 030405            6 DGLKHFCVVVV--NCCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK---   78 (178)
Q Consensus         6 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~---   78 (178)
                      ..++.+|..+.  ++.++.++.     ..+..+.+..++  +..++..+    ...+.+  ++|.|+..+|..++..   
T Consensus         7 ~~l~~~F~~fD~~~~~dG~I~~-----~el~~~l~~lG~~~t~~e~~~~----~~~~~~--~~~~i~~~eFl~~~~~~~~   75 (152)
T d1wdcc_           7 DDLKDVFELFDFWDGRDGAVDA-----FKLGDVCRCLGINPRNEDVFAV----GGTHKM--GEKSLPFEEFLPAYEGLMD   75 (152)
T ss_dssp             HHHHHHHHHHHHHTCSSSCEEG-----GGHHHHHHHTTCCCCHHHHHHT----TCCSST--TSCEECHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHCcCCCCCCeECH-----HHHHHHHHHhccCccHhhhhhh----hhhhcc--ccccccccccccccccccc
Confidence            34666777765  356778878     889988887655  56665543    234555  7899999999988754   


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCC--CCCceeHHHHHHHHHH
Q 030405           79 TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLK--QQGFIERQEVKQMVVA  150 (178)
Q Consensus        79 ~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d--~~G~I~~~e~~~~l~~  150 (178)
                      ........+..+|+.+|.+++|.|+..+|..++..+.. ..+++++..+++.+|.+  ++|.|+++||.+.|.+
T Consensus        76 ~~~~~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~-~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~  148 (152)
T d1wdcc_          76 CEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGE-RLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA  148 (152)
T ss_dssp             SCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSS-CCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred             cchhHHHhhhhhhhccccccCccchHHHHHHHHHHcCC-CCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhc
Confidence            22234456789999999999999999999999988876 67788899999999864  5689999999988743

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.34  E-value=4.7e-12  Score=88.12  Aligned_cols=90  Identities=20%  Similarity=0.210  Sum_probs=48.5

Q ss_pred             HHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHH
Q 030405           48 EALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFS  127 (178)
Q Consensus        48 ~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~  127 (178)
                      ..+...|+.+|.+  ++|.|+..+|..+|...+...+......|..++.+++|.|+|+||+.++..+       +.+..+
T Consensus        77 ~~~~~~f~~~D~d--~~G~I~~~el~~~L~~~g~~~~~~~~~~~~~~d~d~~G~i~~~EF~~~~~~~-------~~~~~~  147 (173)
T d1alva_          77 KKWQAIYKQFDVD--RSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEGGNMDFDNFISCLVRL-------DAMFRA  147 (173)
T ss_dssp             HHHHHHHHHHCTT--CCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHTCSSSCBCHHHHHHHHHHH-------HHHHHH
T ss_pred             hHHHHHHHHhccC--CCCeecHHHHHHHHHHHHHhhHHHHHHHhhccccCCCCeEeHHHHHHHHHHH-------HHHHHH
Confidence            4455556666666  6666666666666555333322222334444455666666666666655433       345556


Q ss_pred             HHhhCCCCCCce--eHHHHHH
Q 030405          128 FQLYDLKQQGFI--ERQEVKQ  146 (178)
Q Consensus       128 F~~~D~d~~G~I--~~~e~~~  146 (178)
                      |+.||+|++|.|  +.+||..
T Consensus       148 f~~~D~d~~G~it~~~~efl~  168 (173)
T d1alva_         148 FKSLDKDGTGQIQVNIQEWLQ  168 (173)
T ss_dssp             HHHHSSSCCSEEEEEHHHHHH
T ss_pred             HHHhCCCCCCcEEecHHHHHH
Confidence            666666666655  3445443

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=99.34  E-value=2.2e-11  Score=85.43  Aligned_cols=130  Identities=17%  Similarity=0.157  Sum_probs=101.6

Q ss_pred             cccchhhhhhhcccCccccCCCCCCCcHHHHHhh--cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCC
Q 030405            6 DGLKHFCVVVVNCCDADLYKQPRGLEDPEALARE--TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKE   83 (178)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~   83 (178)
                      .-|+.+|..+..+..+.++.     ..+..+.+.  ..++..+++.+   +..+|.+  ++|.|+..+|...+..     
T Consensus        18 ~~l~~~F~~~D~d~dG~Is~-----~El~~~l~~l~~~~s~~~~~~l---~~~~d~d--~~~~i~~~ef~~~~~~-----   82 (182)
T d1y1xa_          18 QELMEWFRAVDTDGSGAISV-----PELNAALSSAGVPFSLATTEKL---LHMYDKN--HSGEITFDEFKDLHHF-----   82 (182)
T ss_dssp             SCHHHHHHHHCTTCSSSBCH-----HHHHHHHCBTTBCCCHHHHHHH---HHHHCTT--CSSSBCHHHHHHHHHH-----
T ss_pred             HHHHHHHHHHcCCCcCCCCH-----HHHHHHHHHhcccCchhhhhhh---hcccccc--cccccccccccccccc-----
Confidence            45677788888888888877     777776555  34667766555   4455666  8899999999876532     


Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .......|+.+|.+++|.|+.+||..++..+.. ...++.+..+|+.+|.|++|.|+.+||.+++..+
T Consensus        83 ~~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~-~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~l  149 (182)
T d1y1xa_          83 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGY-QVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV  149 (182)
T ss_dssp             HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSC-CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             ccccccchhccccccchhhhhHHHHHHHHHhCC-chhHHHHHHHHhhcccCCCCCcCHHHHHHHHHHH
Confidence            223577899999999999999999999887765 5667889999999999999999999999987554

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.34  E-value=2.9e-12  Score=77.58  Aligned_cols=72  Identities=17%  Similarity=0.272  Sum_probs=62.3

Q ss_pred             cCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        40 ~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      .++|++++..++..|..+|.+  ++|+|+..+|..++...+.. ....+..+++.+|.+++|.|+|+||+.++..
T Consensus         2 ~~lt~eqi~el~~~F~~~D~d--~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~   74 (77)
T d1f54a_           2 SNLTEEQIAEFKEAFALFDKD--NNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR   74 (77)
T ss_dssp             CCCCHHHHHHHHHHHHHTCTT--CSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHcCC--CCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            468999999999999999999  99999999999998774433 4566899999999999999999999988753

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.33  E-value=3.3e-12  Score=85.96  Aligned_cols=126  Identities=17%  Similarity=0.234  Sum_probs=100.5

Q ss_pred             cchhhhhhhcccCccccCCCCCCCcHHHHHhhcCC--CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC----C
Q 030405            8 LKHFCVVVVNCCDADLYKQPRGLEDPEALARETVF--SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN----K   81 (178)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~----~   81 (178)
                      ++.+|..+..+..+.++.     ..+..+.+..++  +..++..       ++.+  .+|.|+..+|..++....    .
T Consensus         7 fke~F~~~D~d~dG~I~~-----~el~~~l~~lg~~~t~~ei~~-------~~~~--~~~~i~~~eF~~~~~~~~~~~~~   72 (140)
T d1ggwa_           7 YKQAFSLFDRHGTGRIPK-----TSIGDLLRACGQNPTLAEITE-------IEST--LPAEVDMEQFLQVLNRPNGFDMP   72 (140)
T ss_dssp             THHHHHHTCSSSSSEECH-----HHHHHHHHHTSCCCCHHHHHH-------HHTT--SCSSEEHHHHHHHHCTTSSSSSS
T ss_pred             HHHHHHHHCCCCCCeECH-----HHHHHHHHHHHhhhHHHhhhh-------hhcc--ccccccchhhhhhhhhhhhcchh
Confidence            567777888888888888     888887776544  4555433       3455  789999999999886521    2


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .....+..+|+.+|.+++|.|+.++|..++..+.. ..+.+++..+|+.+|.+ +|.|+++||.++|.
T Consensus        73 ~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~-~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~  138 (140)
T d1ggwa_          73 GDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGE-KLSNEEMDELLKGVPVK-DGMVNYHDFVQMIL  138 (140)
T ss_dssp             CCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHS-CSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHH
T ss_pred             hHHHHHHHHHHHHhccCCCcchHHHHHHHHHHcCC-CCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHh
Confidence            23455788999999999999999999999988865 46778899999999988 99999999999873

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.33  E-value=7.4e-12  Score=84.64  Aligned_cols=132  Identities=13%  Similarity=0.080  Sum_probs=101.9

Q ss_pred             ccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CCCCCH
Q 030405            7 GLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKES   84 (178)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~~~~~   84 (178)
                      -++.+|..+..+.++.+++     ..+....+..+.....-..+. .+   +.+  .+|.|+..+|..++..  ......
T Consensus         8 el~e~F~~~D~~~~G~I~~-----~e~~~~l~~lg~~~~~~~~~~-~~---~~~--~~g~i~~~eF~~~~~~~~~~~~~~   76 (145)
T d2mysb_           8 DFKEAFTVIDQNADGIIDK-----DDLRETFAAMGRLNVKNEELD-AM---IKE--ASGPINFTVFLTMFGEKLKGADPE   76 (145)
T ss_pred             HHHHHHHHHCCCCCCCCCH-----HHHHHHHHHhCCCcchHHHHH-HH---HHh--ccCceeechhhhhhhhcccccchH
Confidence            3566778888888888888     888887776654433222222 22   233  6899999999987754  223334


Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ..+..+|+.+|.+++|.|+..+|..++..+.. ..+++++..+++.+|.|++|.|++.||.++|..
T Consensus        77 ~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~-~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~  141 (145)
T d2mysb_          77 DVIMGAFKVLDPDGKGSIKKSFLEELLTTGGG-RFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH  141 (145)
T ss_pred             HHHHHHHHhhhhcccchhhHHHHHHHHHHcCC-CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhcc
Confidence            56789999999999999999999999988776 567888999999999999999999999999843

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=99.32  E-value=3e-12  Score=76.72  Aligned_cols=69  Identities=20%  Similarity=0.350  Sum_probs=59.1

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      +|++++..++.+|..+|.+  ++|+|+..+|..++...+. .....+..+++.+|.+++|.|+|++|+.++.
T Consensus         2 Ls~eei~el~~~F~~~D~d--~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~   71 (73)
T d2pq3a1           2 LTEEQIAEFKEAFSLFDKD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA   71 (73)
T ss_dssp             CCHHHHHHHHHHHHHTCTT--SSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHcCC--CCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            7889999999999999999  9999999999998877443 3456788999999999999999999988775

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=99.30  E-value=3.3e-12  Score=96.46  Aligned_cols=125  Identities=13%  Similarity=0.218  Sum_probs=93.9

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCC---
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSIFHP---  116 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~---  116 (178)
                      .++..++..++..|..+|.+  ++|.|+..+|..+|...+. .....+..+|..+|.+++|.|+|.+|...+.....   
T Consensus       115 ~l~~~~~~~~~~~F~~~D~~--~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~  192 (321)
T d1ij5a_         115 MLSEEDTNILRQLFLSSAVS--GSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVA  192 (321)
T ss_dssp             CCCHHHHHHHHHHHTSSSST--TSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCC
T ss_pred             cCCHHHHHHHHHHHHHHcCC--CCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhH
Confidence            57888999999999999999  9999999999999866332 23345789999999999999999999644321100   


Q ss_pred             -------C-------------------CCh-----------------------------hHHHHHHHHhhCCCCCCceeH
Q 030405          117 -------N-------------------SPI-----------------------------DDKIEFSFQLYDLKQQGFIER  141 (178)
Q Consensus       117 -------~-------------------~~~-----------------------------~e~~~~~F~~~D~d~~G~I~~  141 (178)
                             .                   ...                             ...+..+|..+|.|++|+|+.
T Consensus       193 ~F~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~Is~  272 (321)
T d1ij5a_         193 DFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSK  272 (321)
T ss_dssp             CHHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEH
T ss_pred             HHHHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCCCCCcH
Confidence                   0                   000                             011344799999999999999


Q ss_pred             HHHHHHHHHHHhhcCC-CCCHHHHHHHHHHH
Q 030405          142 QEVKQMVVATLTESGM-NLSDDVIESIIDKV  171 (178)
Q Consensus       142 ~e~~~~l~~~~~~~~~-~l~~~~~~~~~~~~  171 (178)
                      .||..+|..+    |. .+++.++..++..+
T Consensus       273 ~E~~~~l~~~----~~~~~~~~~~~~l~~~~  299 (321)
T d1ij5a_         273 EEVQKVLEDA----HIPESARKKFEHQFSVV  299 (321)
T ss_dssp             HHHHHHHHHT----TCCGGGCSTHHHHHHHH
T ss_pred             HHHHHHHHHc----CCCcCcHHHHHHHHHHh
Confidence            9999999776    53 47777776666554

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.30  E-value=1.1e-12  Score=92.15  Aligned_cols=135  Identities=18%  Similarity=0.216  Sum_probs=106.3

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc-CCCCC
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKE   83 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~~~~   83 (178)
                      +..++.+|..+..+.++.++.     ..+.........+... ..+...|..+|.+  ++|.|+..+|..+... .....
T Consensus         9 i~~l~~~F~~~D~d~dG~Is~-----~e~~~~l~~l~~~~~~-~~~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~~~~   80 (182)
T d1s6ia_           9 IGGLKELFKMIDTDNSGTITF-----DELKDGLKRVGSELME-SEIKDLMDAADID--KSGTIDYGEFIAATVHLNKLER   80 (182)
T ss_dssp             TCSHHHHHHTTSSSSSSCEEH-----HHHHHHHTTTTCCCCH-HHHHHHHHHTCTT--CSSEECHHHHHHHHTTSSSSCC
T ss_pred             HHHHHHHHHHHcCCCcCCCCH-----HHHHHHHHHcCCcccc-ccchhhhhhhhcc--ccccchHHHHHHHHHhhccccc
Confidence            456888899999999999888     8887766664333222 3456677777888  8999999999887644 22222


Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ...+..+|..+|.+++|.|+..++..++..+   +.+++.+..+|+.+|.|++|.|+++||..+|..
T Consensus        81 ~e~l~~aF~~~D~d~~G~i~~~el~~~l~~~---gl~~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~  144 (182)
T d1s6ia_          81 EENLVSAFSYFDKDGSGYITLDEIQQACKDF---GLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK  144 (182)
T ss_dssp             CCSTHHHHHHTTTTCSSEEEHHHHHHTTTTT---TCCTTHHHHHHHHHCSSSSSEEETTHHHHTTSC
T ss_pred             HHHHHHHHHHHhhcCCCccchhhhhhhhhhc---CccHHHHHHHHHHhhcCCCCeEeHHHHHHHHHh
Confidence            3346789999999999999999999888765   346678999999999999999999999999864

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=2.7e-11  Score=84.86  Aligned_cols=99  Identities=17%  Similarity=0.284  Sum_probs=76.0

Q ss_pred             HHHHHhhcccCCCCCcccHHHHHHHHhcC--CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC--------CCh
Q 030405           51 YELFKKISSAVIDDGLINKEEFQLALFKT--NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPN--------SPI  120 (178)
Q Consensus        51 ~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~--------~~~  120 (178)
                      .+.|+.+|.+ .++|.|+..+|..++...  .......++.+|+.+|.+++|.|+.+|+..++..+...        ...
T Consensus        60 ~rif~~fd~~-~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~  138 (180)
T d1xo5a_          60 ERICRVFSTS-PAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM  138 (180)
T ss_dssp             HHHHHHHCCS-TTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTH
T ss_pred             HHHHHhccCC-CCCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHH
Confidence            3466666654 047999999999987552  23345567889999999999999999999988765321        122


Q ss_pred             hHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       121 ~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ++.+..+|+.+|.|++|.|+++||.+++..
T Consensus       139 ~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~  168 (180)
T d1xo5a_         139 KQLIDNILEESDIDRDGTINLSEFQHVISR  168 (180)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            344677999999999999999999999864

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.30  E-value=9.7e-12  Score=75.92  Aligned_cols=70  Identities=20%  Similarity=0.274  Sum_probs=56.8

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      +|++++..++.+|..+|.+  ++|+|+..+|..++...+. .....++.+++.+|.+++|.|+|++|+.++..
T Consensus         8 Lt~~~i~el~~~F~~~D~d--~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~   78 (81)
T d1avsa_           8 LSEEMIAEFKAAFDMFDAD--GGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   78 (81)
T ss_dssp             BCHHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCC--CCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            7888888899999999888  8899999999888876443 34556788888888888888888888887753

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=99.29  E-value=1.1e-11  Score=79.88  Aligned_cols=83  Identities=22%  Similarity=0.408  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVI  164 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~  164 (178)
                      ..+.+++..++  .+|.|+|.+|+..+..  . ..+++.++.+|+.||+|++|+|+.+||+.+|+.+ ...|..++++++
T Consensus         9 ~di~~~~~~~~--~~G~idf~eF~~~~~~--~-~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l-~~~g~~~~~~e~   82 (109)
T d5pala_           9 DDINKAISAFK--DPGTFDYKRFFHLVGL--K-GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGF-SAHGRDLNDTET   82 (109)
T ss_dssp             HHHHHHHHHTC--STTCCCHHHHHHHHTC--T-TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHH-CTTCCCCCHHHH
T ss_pred             HHHHHHHHhcC--CCCcCcHHHHHHHHHh--c-CCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHh-hhccCcCCHHHH
Confidence            34566666665  4588999999987642  2 4567889999999999999999999999999875 334678999998


Q ss_pred             HHHHHHHHh
Q 030405          165 ESIIDKVLS  173 (178)
Q Consensus       165 ~~~~~~~~~  173 (178)
                      +++++.+-.
T Consensus        83 ~~~~~~~D~   91 (109)
T d5pala_          83 KALLAAGDS   91 (109)
T ss_dssp             HHHHHHHCT
T ss_pred             HHHHHHhCC
Confidence            877766543

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.29  E-value=5.9e-11  Score=81.85  Aligned_cols=118  Identities=14%  Similarity=0.165  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC------CCCCH----------HHHHHHHHHHhcCCCCcccHHHHHH
Q 030405           46 EIEALYELFKKISSAVIDDGLINKEEFQLALFKT------NKKES----------LFADRVFDLFDTKHNGILDFEEFAR  109 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~------~~~~~----------~~~~~lf~~~d~~~~g~i~~~ef~~  109 (178)
                      ..++|.+.|+.+|.+  ++|.|+..+|..++...      .....          .....++...+.+++|.+++.++..
T Consensus         5 ~~~~l~~~F~~~D~d--~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   82 (176)
T d1nyaa_           5 ASDRLKKRFDRWDFD--GNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIR   82 (176)
T ss_dssp             HHHHHHHHHHHCCSS--CCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHH
T ss_pred             HHHHHHHHHHHHcCC--CCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHH
Confidence            346788999999999  99999999999987441      11111          1124566777888899999999988


Q ss_pred             HHHhhCCCCCh-------hHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          110 ALSIFHPNSPI-------DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       110 ~~~~~~~~~~~-------~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      .+.........       ...++.+|..+|.|++|.|+.+||+.++..+      ++++++++.+++.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~------~~~~~~~~~~f~~~  145 (176)
T d1nyaa_          83 VTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTAL------GMSKAEAAEAFNQV  145 (176)
T ss_dssp             HHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHT------TCCHHHHHHHHHHH
T ss_pred             HHhhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhc------CCcHHHHHHHHHHH
Confidence            77655432221       2457889999999999999999999998764      47888776655544

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.28  E-value=8e-12  Score=73.08  Aligned_cols=63  Identities=19%  Similarity=0.321  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ..++.+|+.+|.+++|.|+.++|..++..+.. ..+++.+..+|+.+|.|++|.|+++||.++|
T Consensus         3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~-~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m   65 (65)
T d1fw4a_           3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGE-KLTDEEVDEMIREADIDGDGQVNYEEFVQMM   65 (65)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC-CCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCC-CCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence            45678899999999999999999998888876 5667788899999999999999999988763

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=99.26  E-value=2.3e-11  Score=84.29  Aligned_cols=140  Identities=14%  Similarity=0.155  Sum_probs=100.5

Q ss_pred             cccccchhhhhhhcccCccccCCCCCCCcHHHHHh----hcCCCHHHHHHHH----HHHHhh--cccCCCCCcccHHHHH
Q 030405            4 CLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALAR----ETVFSVSEIEALY----ELFKKI--SSAVIDDGLINKEEFQ   73 (178)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~l~----~~F~~~--d~~~~~~g~i~~~ef~   73 (178)
                      +...|+.++..+.-+.++.++.     .++..+..    ...........+.    ..+...  +.+  +++.|+.++|.
T Consensus         4 ~~~~l~~~F~~~D~d~dG~Is~-----~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~ef~   76 (174)
T d2scpa_           4 WVQKMKTYFNRIDFDKDGAITR-----MDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFI   76 (174)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECH-----HHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHH
T ss_pred             HHHHHHHHHHHHccCCCCcEeH-----HHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccC--CCCcCcHHHHH
Confidence            3456788889999888998877     66655432    2223322222222    223332  344  78899999998


Q ss_pred             HHHhcCCCCC------HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHH
Q 030405           74 LALFKTNKKE------SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQM  147 (178)
Q Consensus        74 ~~l~~~~~~~------~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~  147 (178)
                      ..+.......      ...+..+|+.+|.+++|.|+.+||..++..+.   ...+.+..+|+.+|.|++|.|+.+||..+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~---~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~  153 (174)
T d2scpa_          77 NSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG---LDKTMAPASFDAIDTNNDGLLSLEEFVIA  153 (174)
T ss_dssp             HHHHHHTSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT---CCGGGHHHHHHHHCTTCSSEECHHHHHHH
T ss_pred             HHHHhhhcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHh---hhhHHHHHHHhhcCCCCCCcEeHHHHHHH
Confidence            8875521111      22367899999999999999999999887663   35677899999999999999999999999


Q ss_pred             HHHHHh
Q 030405          148 VVATLT  153 (178)
Q Consensus       148 l~~~~~  153 (178)
                      +...+.
T Consensus       154 ~~~f~~  159 (174)
T d2scpa_         154 GSDFFM  159 (174)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            987643

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.25  E-value=1.6e-11  Score=73.88  Aligned_cols=67  Identities=24%  Similarity=0.334  Sum_probs=52.3

Q ss_pred             CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           83 ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        83 ~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .+..+..+|+.+|.+++|.|+..+|..++..+.. ..+++.+..+|+.+|.|++|.|+++||.++|+.
T Consensus         7 ~eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~-~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~   73 (75)
T d1jc2a_           7 SEEELANCFRIFDKNADGFIDIEELGEILRATGE-HVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG   73 (75)
T ss_dssp             CHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSS-CCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCC-CccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            3455677888888888888888888888877765 566677888888888888888888888887753

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=6.9e-11  Score=82.00  Aligned_cols=91  Identities=20%  Similarity=0.327  Sum_probs=67.7

Q ss_pred             HHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHH
Q 030405           47 IEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIE  125 (178)
Q Consensus        47 i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~  125 (178)
                      ...+...|..+|.+  ++|.|+..++..++...+.. ....++.+++.+|.  +|.++|++|+.++..+       +.+.
T Consensus        76 ~~~~~~~f~~~D~d--~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~~~d~--~g~i~~~eF~~~~~~~-------~~~~  144 (172)
T d1juoa_          76 LNGWRQHFISFDTD--RSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYST--NGKITFDDYIACCVKL-------RALT  144 (172)
T ss_dssp             HHHHHHHHHTTCTT--CCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHTCS--SSSEEHHHHHHHHHHH-------HHHH
T ss_pred             hhhhhHHHHHhCcC--CCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHh--cCCcCHHHHHHHHHHH-------HHHH
Confidence            35577788888888  88888888888887664433 45567888888754  5778888888887654       3577


Q ss_pred             HHHHhhCCCCCCce--eHHHHHHHH
Q 030405          126 FSFQLYDLKQQGFI--ERQEVKQMV  148 (178)
Q Consensus       126 ~~F~~~D~d~~G~I--~~~e~~~~l  148 (178)
                      .+|+.+|+|++|.|  +++||..++
T Consensus       145 ~~f~~~D~d~~G~Itl~~~eFl~~~  169 (172)
T d1juoa_         145 DSFRRRDTAQQGVVNFPYDDFIQCV  169 (172)
T ss_dssp             HHHHHTCTTCCSEEEEEHHHHHHHH
T ss_pred             HHHHHhCCCCCCcEEecHHHHHHHH
Confidence            88888888888887  567776654

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=99.24  E-value=2.8e-11  Score=73.07  Aligned_cols=66  Identities=14%  Similarity=0.237  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ...+.++|+.+|.+++|.|+..||..++..+.. ..+.+++..+|+.+|.|++|.|+++||.++|++
T Consensus         8 ~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k   73 (77)
T d1oqpa_           8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGE-NLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK   73 (77)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTC-CCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCEechHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence            345788999999999999999999999998876 566778899999999999999999999998865

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=8.9e-12  Score=83.44  Aligned_cols=131  Identities=14%  Similarity=0.097  Sum_probs=98.4

Q ss_pred             cchhhhhhhcccCccccCCCCCCCcHHHHHhhc--CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC----C
Q 030405            8 LKHFCVVVVNCCDADLYKQPRGLEDPEALARET--VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN----K   81 (178)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~----~   81 (178)
                      ++.+|..+.....+.+++     ..+....+..  ..+..++..+...+.. ..+  ++|.|+..+|..++....    .
T Consensus         2 ~ke~F~~~D~d~~G~I~~-----~el~~~l~~lg~~~t~~e~~~~~~~~~~-~~~--~~~~i~~~ef~~~~~~~~~~~~~   73 (139)
T d1w7jb1           2 FKEAFELFDRVGDGKILY-----SQCGDVMRALGQNPTNAEVLKVLGNPKS-DEL--KSRRVDFETFLPMLQAVAKNRGQ   73 (139)
T ss_dssp             HHHHHHHHCCSSSSEEES-----TTHHHHHHHTTCCCCHHHHHHHTTCCCH-HHH--TTCEEEHHHHHHHHHHHCC----
T ss_pred             HHHHHHHHhCCCCCeECH-----HHHHHHHHHhccCCCHHHHHHHHHHHhc-ccc--cCCceeeeccchhhHhhhhhccc
Confidence            466788888888889888     8888877764  4566666655543321 123  688999999988875421    1


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           82 KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        82 ~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      .....+..+|+.+|.+++|.|+.++|..++..+.. ..+++.++.+++. |.|++|.|+++||.++|
T Consensus        74 ~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~e~~~l~~~-~~d~dg~I~~~eF~~~l  138 (139)
T d1w7jb1          74 GTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGE-KMTEEEVETVLAG-HEDSNGCINYEAFLKHI  138 (139)
T ss_dssp             ----CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSS-CCCHHHHHHHHTT-CCCTTSEEEHHHHHHHT
T ss_pred             cHHHHHHHhhhhccCCCCCeEeHHHHHHHHHHhCC-CCCHHHHHHHHhh-CCCCCCeEeHHHHHHHh
Confidence            11223578899999999999999999999988865 5677888888875 88999999999999875

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.24  E-value=3.3e-11  Score=73.62  Aligned_cols=71  Identities=17%  Similarity=0.238  Sum_probs=60.5

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCC-CCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           41 VFSVSEIEALYELFKKISSAVID-DGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~-~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      .+|+++++.++..|..+|.+  + +|.|+..+|..++...+. .....++.+++.+|.+++|.|+|+||+.++..
T Consensus         8 ~ls~eq~~~~~~~F~~fD~d--~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~   80 (82)
T d1wrka1           8 QLTEEQKNEFKAAFDIFVLG--AEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   80 (82)
T ss_dssp             HCCHHHHHHHHHHHHHHTTT--CTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHHHHHcCc--CCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            48999999999999999987  6 599999999999877554 44567899999999999999999999988764

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.22  E-value=1.4e-11  Score=79.36  Aligned_cols=80  Identities=19%  Similarity=0.355  Sum_probs=61.2

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIES  166 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~  166 (178)
                      +..++..+  +.+|.|+|.||+.++...   ....+.++.+|+.||.|++|+|+.+|++.+|+.+ ...|..+++++++.
T Consensus        11 I~~~~~~~--d~dG~idf~EF~~~~~~~---~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l-~~~g~~ls~~ev~~   84 (109)
T d1pvaa_          11 IKKALDAV--KAEGSFNHKKFFALVGLK---AMSANDVKKVFKAIDADASGFIEEEELKFVLKSF-AADGRDLTDAETKA   84 (109)
T ss_dssp             HHHHHHHT--CSTTCCCHHHHHHHHTCT---TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT-CTTCCCCCHHHHHH
T ss_pred             HHHHHHhc--CCCCCCcHHHHHHHHHHc---cCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHh-hhcCCCCCHHHHHH
Confidence            44555544  456889999999887543   3456789999999999999999999999998764 22356899999887


Q ss_pred             HHHHHH
Q 030405          167 IIDKVL  172 (178)
Q Consensus       167 ~~~~~~  172 (178)
                      +++.+-
T Consensus        85 ~~~~~D   90 (109)
T d1pvaa_          85 FLKAAD   90 (109)
T ss_dssp             HHHHHC
T ss_pred             HHHHHC
Confidence            766543

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=99.20  E-value=5.7e-11  Score=72.39  Aligned_cols=65  Identities=23%  Similarity=0.310  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      ...+..+|+.+|.+++|.|+..+|..++..+.. ..+.+.+..+|+.+|.|++|.|+++||.++|+
T Consensus        14 ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~   78 (81)
T d1fi5a_          14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGE-TITEDDIEELMKDGDKNNDGRIDYDEFLEFMK   78 (81)
T ss_dssp             HHHHHHHHHHHCSSCSSEECHHHHHHHHHTSSS-CCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHhcCC-CCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence            445677888888888888888888888877665 45667788888888888888888888887763

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.20  E-value=1.3e-11  Score=72.77  Aligned_cols=63  Identities=24%  Similarity=0.433  Sum_probs=44.8

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      +.++|+.+|.+++|.|+..+|..++..+.....+++.+..+|+.+|.|++|.|+++||..+|.
T Consensus         4 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~   66 (68)
T d1c7va_           4 ILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK   66 (68)
T ss_dssp             HHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            566777777777777777777777766654334566777777777777777777777777664

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=99.20  E-value=2.4e-10  Score=80.01  Aligned_cols=140  Identities=18%  Similarity=0.199  Sum_probs=96.1

Q ss_pred             cccccchhhhhhhcccCccccCCCCCCCcHHHHH-----hhcCCCHHH--HH-HHHHHH-HhhcccCCCCCcccHHHHHH
Q 030405            4 CLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALA-----RETVFSVSE--IE-ALYELF-KKISSAVIDDGLINKEEFQL   74 (178)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--i~-~l~~~F-~~~d~~~~~~g~i~~~ef~~   74 (178)
                      ++.-++++|..+.-+.++.++.     .++....     +....+..+  +. .+...+ ...+..  ..+.++..++..
T Consensus        12 ~i~r~k~~F~~~D~d~dG~I~~-----~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~e~~~   84 (189)
T d1qv0a_          12 WIKRHKHMFDFLDINGNGKITL-----DEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGME--YGKEIAFPQFLD   84 (189)
T ss_dssp             HHHHHHHHHHHHCTTCSSCBCH-----HHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCC--TTCCBCHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCcCcH-----HHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhcccc--CCCceehHHHHH
Confidence            4456788888888888888877     6655432     222333332  22 222332 333444  677899888877


Q ss_pred             HHhc----------CC--CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHH
Q 030405           75 ALFK----------TN--KKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQ  142 (178)
Q Consensus        75 ~l~~----------~~--~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~  142 (178)
                      .+..          ..  ......+..+|..+|.+++|.|+.+||..++..+.. ..+++.++.+|+.+|.|++|.|+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~-~~~~~~~~~lf~~~D~d~dG~Is~~  163 (189)
T d1qv0a_          85 GWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGI-SPSQEDCEATFRHCDLDNAGDLDVD  163 (189)
T ss_dssp             HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSS-CCCHHHHHHHHHHSCCCTTSCEEHH
T ss_pred             HHHHHHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCC-CCCHHHHHHHHHHhCCCCCCcEeHH
Confidence            6532          11  111234667899999999999999999999998876 5678889999999999999999999


Q ss_pred             HHHHHHHHH
Q 030405          143 EVKQMVVAT  151 (178)
Q Consensus       143 e~~~~l~~~  151 (178)
                      ||.+++..+
T Consensus       164 EF~~~~~~~  172 (189)
T d1qv0a_         164 EMTRQHLGF  172 (189)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999998765

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.17  E-value=2.6e-10  Score=78.52  Aligned_cols=134  Identities=19%  Similarity=0.160  Sum_probs=96.8

Q ss_pred             ccchhhhhhhcccCccccCCCCCCCcHHHHHhhc------CCCHHHHHHHH--------HHHHhhcccCCCCCcccHHHH
Q 030405            7 GLKHFCVVVVNCCDADLYKQPRGLEDPEALARET------VFSVSEIEALY--------ELFKKISSAVIDDGLINKEEF   72 (178)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~l~--------~~F~~~d~~~~~~g~i~~~ef   72 (178)
                      .|+.+|..+.-+.++.++.     .+++......      ..+..++..+.        ..+...+.+  ++|.++..++
T Consensus         8 ~l~~~F~~~D~d~dG~Is~-----~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~   80 (176)
T d1nyaa_           8 RLKKRFDRWDFDGNGALER-----ADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVG--SDGSLTEEQF   80 (176)
T ss_dssp             HHHHHHHHCCSSCCSSBCS-----HHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSC--TTCCBCHHHH
T ss_pred             HHHHHHHHHcCCCCCcCcH-----HHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCC--CCCcccHHHH
Confidence            3567778888888888877     6666654331      12223333332        333444566  7899999998


Q ss_pred             HHHHhcCC--CC-------CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHH
Q 030405           73 QLALFKTN--KK-------ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQE  143 (178)
Q Consensus        73 ~~~l~~~~--~~-------~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e  143 (178)
                      ...+....  ..       ....+..+|..+|.+++|.|+.+||..++..+   +.+++.++.+|..+|.|++|.|+++|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~---~~~~~~~~~~f~~~D~d~dG~i~~~E  157 (176)
T d1nyaa_          81 IRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTAL---GMSKAEAAEAFNQVDTNGNGELSLDE  157 (176)
T ss_dssp             HHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHT---TCCHHHHHHHHHHHCTTCSSEEEHHH
T ss_pred             HHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhc---CCcHHHHHHHHHHHCCCCCCcEeHHH
Confidence            87664411  11       12346789999999999999999999988766   34678899999999999999999999


Q ss_pred             HHHHHHH
Q 030405          144 VKQMVVA  150 (178)
Q Consensus       144 ~~~~l~~  150 (178)
                      |..+++.
T Consensus       158 f~~~~~~  164 (176)
T d1nyaa_         158 LLTAVRD  164 (176)
T ss_dssp             HHHHHSC
T ss_pred             HHHHHHH
Confidence            9999855

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.17  E-value=7.4e-11  Score=71.89  Aligned_cols=63  Identities=25%  Similarity=0.372  Sum_probs=56.9

Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .++++|+.+|.+++|.|+..|+..++..+..  .+.+.+..+|+.+|.|++|.|+++||..++..
T Consensus         7 e~~~~F~~~D~d~~G~I~~~El~~~l~~lg~--~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~   69 (81)
T d2opoa1           7 DRERIFKRFDTNGDGKISSSELGDALKTLGS--VTPDEVRRMMAEIDTDGDGFISFDEFTDFARA   69 (81)
T ss_dssp             HHHHHHHHHCTTCSSEEEHHHHHHHHHTTTT--CCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCcHHHHHHHHHHhhc--CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            3688999999999999999999999988863  56778999999999999999999999998755

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.15  E-value=1.5e-10  Score=70.53  Aligned_cols=63  Identities=21%  Similarity=0.388  Sum_probs=57.9

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      ++.+|+.+|.+++|.|+..|+..++..+.. ..++.+++.+|+.+|.|++|.|+++||..+|..
T Consensus        16 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~   78 (81)
T d1avsa_          16 FKAAFDMFDADGGGDISTKELGTVMRMLGQ-NPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   78 (81)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHTTC-CCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCeEchhHHHHHHHHcCC-CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            578899999999999999999999998876 577888999999999999999999999998864

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.14  E-value=1e-10  Score=67.29  Aligned_cols=58  Identities=14%  Similarity=0.256  Sum_probs=42.6

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK  145 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~  145 (178)
                      +.++|+.+|.+++|.|+..+|..++..+.. ..+.+.+..+|+.+|.|++|.|+++||.
T Consensus         3 l~~aF~~fD~~~~G~I~~~el~~~l~~~g~-~~~~~ei~~l~~~~D~d~dg~I~~~eFl   60 (61)
T d2fcea1           3 FVKAFQVFDKESTGKVSVGDLRYMLTGLGE-KLTDAEVDELLKGVEVDSNGEIDYKKFI   60 (61)
T ss_dssp             HHHHHHHHCTTCCSCEEHHHHHHHHHHTTC-CCCHHHHHHHHTTCCCCTTSEECHHHHH
T ss_pred             HHHHHHHHCCCCCCeEeHHHHHHHHHHcCC-CCCHHHHHHHHHHcCCCCCCcEeHHHhc
Confidence            466777777777777777777777777665 4566677777777777777777777765

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=99.12  E-value=1.1e-10  Score=69.65  Aligned_cols=63  Identities=19%  Similarity=0.326  Sum_probs=57.5

Q ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        86 ~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      .++.+|+.+|.+++|.|++.++..++..+.. ..+++.+..+|+.+|.|++|.|+++||..+|.
T Consensus         9 el~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~   71 (73)
T d2pq3a1           9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLTMMA   71 (73)
T ss_dssp             HHHHHHHHTCTTSSSEEEGGGHHHHHHHTTC-CCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCceEeHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            3578999999999999999999999998876 56788999999999999999999999999874

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.11  E-value=2e-11  Score=75.51  Aligned_cols=83  Identities=19%  Similarity=0.332  Sum_probs=60.0

Q ss_pred             CCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHH
Q 030405           63 DDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQ  142 (178)
Q Consensus        63 ~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~  142 (178)
                      ++|.|+..+...+ .......-..++.+|+.+|.+++|.|++.|+..++..+.. ..+++.++.+|+.+|.|++|.|+++
T Consensus         2 ~~g~id~~~~~ma-~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~-~~s~~e~~~l~~~~D~d~~g~I~~~   79 (87)
T d1s6ja_           2 SSGHIDDDDKHMA-ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGS-ELMESEIKDLMDAADIDKSGTIDYG   79 (87)
T ss_dssp             CSSSSSSHHHHSS-SSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTS-SCCHHHHHHHHHHHCTTCSSEECHH
T ss_pred             CCCccCchHHHHH-hhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCC-CCCHHHHHHHHHHcCCCCCCeEeHH
Confidence            5677777664421 1111111123577899999999999999999888888765 5667788889999999999999999


Q ss_pred             HHHHH
Q 030405          143 EVKQM  147 (178)
Q Consensus       143 e~~~~  147 (178)
                      ||..+
T Consensus        80 EFl~a   84 (87)
T d1s6ja_          80 EFIAA   84 (87)
T ss_dssp             HHTTC
T ss_pred             HHHHH
Confidence            88754

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=4.2e-12  Score=88.29  Aligned_cols=118  Identities=15%  Similarity=0.171  Sum_probs=75.0

Q ss_pred             HHHHHHh--hcccCCCCCcccHHHHHHHHhcCCCC---CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHH
Q 030405           50 LYELFKK--ISSAVIDDGLINKEEFQLALFKTNKK---ESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKI  124 (178)
Q Consensus        50 l~~~F~~--~d~~~~~~g~i~~~ef~~~l~~~~~~---~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~  124 (178)
                      |.+.|.+  +|.+  ++|.|+..++..++......   ....+..+|...|.+++|.|+|++|...+..+..    ++++
T Consensus         7 l~k~~~k~~~d~n--~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~----r~ei   80 (170)
T d2zkmx1           7 LDKILVKLKMQLN--SEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP----RPEI   80 (170)
T ss_dssp             HHHHHHHHHHSCC--TTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC----CHHH
T ss_pred             HHHHHHHHhcccC--CCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCC----HHHH
Confidence            3444443  6888  99999999999988442211   1123455677788899999999999999988864    3678


Q ss_pred             HHHHHhhCCCCCCceeHHHHHHHHHHHHhhc------CCCCCHHHHHHHHHHHHh
Q 030405          125 EFSFQLYDLKQQGFIERQEVKQMVVATLTES------GMNLSDDVIESIIDKVLS  173 (178)
Q Consensus       125 ~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~------~~~l~~~~~~~~~~~~~~  173 (178)
                      ..+|+.||.|++|.||.+||..+|....+..      .+.++.+.+..++.....
T Consensus        81 ~~~F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~  135 (170)
T d2zkmx1          81 DEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEP  135 (170)
T ss_dssp             HTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCC
T ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHcc
Confidence            8999999999999999999999997642221      123566677777666544

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.10  E-value=1.8e-10  Score=67.52  Aligned_cols=63  Identities=21%  Similarity=0.322  Sum_probs=55.0

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      +++.|..+|.+  ++|+|+..+|..++...+ ......++.+|+.+|.+++|.|+|+||..++..+
T Consensus         3 ~r~~F~~~D~d--~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~~   66 (67)
T d1tiza_           3 AKRVFEKFDKN--KDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEKM   66 (67)
T ss_dssp             HHHHHHHHCTT--SSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHTC
T ss_pred             HHHHHHHHCCC--CcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHHh
Confidence            67899999999  999999999999997754 3345678999999999999999999999988653

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.10  E-value=2.2e-10  Score=79.68  Aligned_cols=135  Identities=16%  Similarity=0.126  Sum_probs=94.9

Q ss_pred             cchhhhhh-hcccCccccCCCCCCCcHHHHHhhc------CCCHHHHHH--------HHHHHHhhcccCCCCCcccHHHH
Q 030405            8 LKHFCVVV-VNCCDADLYKQPRGLEDPEALARET------VFSVSEIEA--------LYELFKKISSAVIDDGLINKEEF   72 (178)
Q Consensus         8 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~--------l~~~F~~~d~~~~~~g~i~~~ef   72 (178)
                      ++.+|..+ .-+.++.++.     .++.......      .........        +...+...+.+  ++|.|+..++
T Consensus        10 i~~~F~~~~D~d~dG~Is~-----~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~i~~~~~   82 (185)
T d2sasa_          10 IKFTFDFFLDMNHDGSIQD-----NDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADIN--KDDVVSWEEY   82 (185)
T ss_dssp             HHHHHHHHTCTTCSSEECH-----HHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTT--CSSCEEHHHH
T ss_pred             HHHHHHHhhcCCCCCcCCH-----HHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcC--CCCcEeeeHh
Confidence            45566653 5666777666     5555443221      122222222        22344556777  8899999999


Q ss_pred             HHHHhc----------CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHH
Q 030405           73 QLALFK----------TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQ  142 (178)
Q Consensus        73 ~~~l~~----------~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~  142 (178)
                      ..++..          ........+..+|+.+|.+++|.|+.+||..++..+   +.+++.+..+|+.+|.|++|.|+++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~---~l~~~~~~~~f~~~D~d~dG~i~~~  159 (185)
T d2sasa_          83 LAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNF---QLQCADVPAVYNVITDGGKVTFDLN  159 (185)
T ss_dssp             HHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSS---CCCCSSHHHHHHHHHTTTTSCCSHH
T ss_pred             hHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHc---CCCHHHHHHHHHHcCCCCCCCCcHH
Confidence            887633          111123457889999999999999999999988765   3456778999999999999999999


Q ss_pred             HHHHHHHHHH
Q 030405          143 EVKQMVVATL  152 (178)
Q Consensus       143 e~~~~l~~~~  152 (178)
                      ||..++...+
T Consensus       160 EF~~~~~~f~  169 (185)
T d2sasa_         160 RYKELYYRLL  169 (185)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999998764

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.10  E-value=2.5e-10  Score=68.41  Aligned_cols=64  Identities=23%  Similarity=0.346  Sum_probs=56.0

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      .+..+|..+|.+  ++|+|+..+|..++...+.. ....++.+++.+|.+++|.|+|+||+.++..+
T Consensus        10 el~~~F~~fD~~--~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~~   74 (75)
T d1jc2a_          10 ELANCFRIFDKN--ADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV   74 (75)
T ss_dssp             HHHHHHHHHCCS--TTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHTC
T ss_pred             HHHHHHHHHcCC--CcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence            578899999999  99999999999999885544 45678999999999999999999999988653

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.09  E-value=2.6e-10  Score=68.67  Aligned_cols=61  Identities=23%  Similarity=0.330  Sum_probs=56.8

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      ++.+|+.+|.+++|.|+..|+..++..+.. ..+++.+..+|+.+|.+++|.|+++||..++
T Consensus        12 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m   72 (77)
T d1f54a_          12 FKEAFALFDKDNNGSISSSELATVMRSLGL-SPSEAEVNDLMNEIDVDGNHQIEFSEFLALM   72 (77)
T ss_dssp             HHHHHHHTCTTCSSEEEHHHHHHHHHHHTC-CCCHHHHHHHHHTTCCSSCCEEEHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCeEChHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence            578999999999999999999999999877 5678889999999999999999999999987

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.08  E-value=4.7e-10  Score=68.37  Aligned_cols=64  Identities=17%  Similarity=0.311  Sum_probs=57.6

Q ss_pred             HHHHHHHHHhcCC-CCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           86 FADRVFDLFDTKH-NGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        86 ~~~~lf~~~d~~~-~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      .++.+|+.+|.++ +|.|+..++..++..+.. ..+++.++.+++.+|.|++|.|+++||..+|.+
T Consensus        16 ~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~-~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~   80 (82)
T d1wrka1          16 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQ-NPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   80 (82)
T ss_dssp             HHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTC-CCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCC-CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            4678999999985 799999999999998887 577889999999999999999999999998753

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.08  E-value=1.1e-10  Score=68.63  Aligned_cols=62  Identities=23%  Similarity=0.431  Sum_probs=55.0

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC--CCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFKTNK--KESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~--~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      .+++.|..+|.+  ++|+|+..+|..++...+.  .....++.+++.+|.+++|.|+|+||+.++.
T Consensus         3 el~~~F~~~D~d--~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~   66 (68)
T d1c7va_           3 EILRAFKVFDAN--GDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK   66 (68)
T ss_dssp             HHHHHHHHHSCS--GGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred             HHHHHHHHHcCC--CcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            588999999999  9999999999999877543  3567789999999999999999999998875

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.07  E-value=1.8e-10  Score=67.07  Aligned_cols=60  Identities=18%  Similarity=0.342  Sum_probs=53.0

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHH
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARA  110 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~  110 (178)
                      .|+.+|..+|++  ++|+|+..+|+.++...+. .....+..+++.+|.+++|.|+|++|+.+
T Consensus         4 el~~aF~~fD~d--~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~   64 (65)
T d1fw4a_           4 EIREAFRVFDKD--GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM   64 (65)
T ss_dssp             HHHHHHHHHCTT--CSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHH
T ss_pred             HHHHHHHHHcCC--CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHH
Confidence            578999999999  9999999999999887543 44567899999999999999999999875

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=99.07  E-value=2.1e-09  Score=74.87  Aligned_cols=140  Identities=13%  Similarity=0.151  Sum_probs=97.0

Q ss_pred             ccccchhhhhhhcccCccccCCCCCCCcHHHH-----HhhcCCCHHHHHH---HHHHHH-hhcccCCCCCcccHHHHHHH
Q 030405            5 LDGLKHFCVVVVNCCDADLYKQPRGLEDPEAL-----ARETVFSVSEIEA---LYELFK-KISSAVIDDGLINKEEFQLA   75 (178)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~---l~~~F~-~~d~~~~~~g~i~~~ef~~~   75 (178)
                      +.-+++++..+..+.++.++.     .++...     .+..+.+..+...   +...+. .....  ..+.++..++...
T Consensus        11 ~~~~k~~F~~~D~d~dG~Is~-----~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~   83 (187)
T d1uhka1          11 IGRHKHMFNFLDVNHNGKISL-----DEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMK--YGVETDWPAYIEG   83 (187)
T ss_dssp             HHHHHHHHHHHCTTCCSEEEH-----HHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCC--TTCEEEHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcCcH-----HHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhccccc--ccccccHHHHHHH
Confidence            345678888888888888877     666443     2234455444322   222222 22222  4456777777654


Q ss_pred             Hhc----------CCC--CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHH
Q 030405           76 LFK----------TNK--KESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQE  143 (178)
Q Consensus        76 l~~----------~~~--~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e  143 (178)
                      +..          ...  .....+..+|+.+|.+++|.|+.+||..++..+.. ...++.+..+|+.+|.|++|.|+++|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~-~~~~~~~~~lf~~~D~d~dG~Is~~E  162 (187)
T d1uhka1          84 WKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGI-IQSSEDCEETFRVCDIDESGQLDVDE  162 (187)
T ss_dssp             HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTS-CCSHHHHHHHHHHSCCCTTSCEEHHH
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCC-CccHHHHHHHHHHhCCCCCCCEeHHH
Confidence            322          111  11234678999999999999999999999998865 56788899999999999999999999


Q ss_pred             HHHHHHHHH
Q 030405          144 VKQMVVATL  152 (178)
Q Consensus       144 ~~~~l~~~~  152 (178)
                      |.+++...+
T Consensus       163 F~~~~~~~~  171 (187)
T d1uhka1         163 MTRQHLGFW  171 (187)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999887753

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.07  E-value=5.5e-10  Score=71.76  Aligned_cols=82  Identities=16%  Similarity=0.287  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVI  164 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~  164 (178)
                      ..+..++..++.  +|.|+|++|...+...   ....+.++.+|+.||.|++|+|+.+||..+|..+ ...+..++++++
T Consensus         9 ~~i~~~~~~~~~--~~~i~f~eF~~~~~~~---~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l-~~~~~~~~~~e~   82 (109)
T d1rwya_           9 EDIKKAIGAFTA--ADSFDHKKFFQMVGLK---KKSADDVKKVFHILDKDKSGFIEEDELGSILKGF-SSDARDLSAKET   82 (109)
T ss_dssp             HHHHHHHHTTCS--TTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHH-CTTCCCCCHHHH
T ss_pred             HHHHHHHHhccc--CCCcCHHHHHHHHccc---cCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHh-ccccccCCHHHH
Confidence            345666666644  5779999999887543   2356789999999999999999999999999886 223457899888


Q ss_pred             HHHHHHHH
Q 030405          165 ESIIDKVL  172 (178)
Q Consensus       165 ~~~~~~~~  172 (178)
                      +.+++.+-
T Consensus        83 ~~~~~~~D   90 (109)
T d1rwya_          83 KTLMAAGD   90 (109)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            77666553

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=99.06  E-value=4.3e-10  Score=68.36  Aligned_cols=62  Identities=24%  Similarity=0.426  Sum_probs=54.8

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      .|..+|..+|.+  ++|+|+..+|..++...+.. ....++.+|..+|.+++|.|+|+||+.++.
T Consensus        16 ~l~~~F~~~D~d--~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~   78 (81)
T d1fi5a_          16 ELSDLFRMFDKN--ADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK   78 (81)
T ss_dssp             HHHHHHHHHCSS--CSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHS
T ss_pred             HHHHHHHHHcCC--CCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence            578899999999  99999999999999885543 456789999999999999999999999874

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.06  E-value=3.5e-10  Score=70.45  Aligned_cols=68  Identities=21%  Similarity=0.300  Sum_probs=44.5

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      +|+++.+++...|..+|++  ++|+|+..++..++...+. ....+..+++.+|.+++|.|+++||+.++.
T Consensus         3 ls~ee~~~y~~~F~~~D~d--~~G~i~~~e~~~~l~~~~l-~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~   70 (92)
T d1fi6a_           3 ITDEQRQYYVNQFKTIQPD--LNGFIPGSAAKEFFTKSKL-PILELSHIWELSDFDKDGALTLDEFCAAFH   70 (92)
T ss_dssp             CCHHHHHHHHHHHTTTCCS--TTCEEEHHHHHHHHHHHSS-CHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCC--cccchhHHHHHHHHHHccC-CHHHHHHHHHHhCCCCCCeecHHHHHHHHH
Confidence            5666677777777777766  6777777777776655443 234456677777777777777777765443

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=2.5e-10  Score=71.59  Aligned_cols=59  Identities=15%  Similarity=0.158  Sum_probs=32.0

Q ss_pred             HHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           88 DRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        88 ~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      +.+|+.+|.+++|.|+.+|+..++...   +.+.+.+..+|+.+|.|++|.|+++||..+|.
T Consensus        13 ~~~F~~~D~d~~G~is~~e~~~~l~~~---~l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~   71 (95)
T d1c07a_          13 DEIFLKTDKDMDGFVSGLEVREIFLKT---GLPSTLLAHIWSLCDTKDCGKLSKDQFALAFH   71 (95)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHTT---TCCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred             HHHHHHHCCCCCCCCcHHHHHHHHHhc---CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            445555555555555555555555432   23445555555555555555555555555544

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.04  E-value=3e-10  Score=65.26  Aligned_cols=59  Identities=14%  Similarity=0.299  Sum_probs=52.5

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHH
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFAR  109 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~  109 (178)
                      .++++|..+|++  ++|+|+..+|+.++...+. .....+..+++.+|.+++|.|+|++|+.
T Consensus         2 el~~aF~~fD~~--~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           2 DFVKAFQVFDKE--STGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHCTT--CCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             hHHHHHHHHCCC--CCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            588999999999  9999999999999988543 4567789999999999999999999974

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=99.04  E-value=5.8e-10  Score=67.07  Aligned_cols=64  Identities=14%  Similarity=0.228  Sum_probs=56.2

Q ss_pred             HHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC-CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           48 EALYELFKKISSAVIDDGLINKEEFQLALFKTNK-KESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        48 ~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      +.++++|..+|.+  ++|+|+..+|..++...+. .....+..+|+.+|.+++|.|+|+||+.++..
T Consensus         9 e~l~~~F~~~D~d--~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k   73 (77)
T d1oqpa_           9 EEILKAFRLFDDD--NSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK   73 (77)
T ss_dssp             HHHHHHHHHHCTT--CSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCC--CCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence            4689999999999  9999999999999988443 34567899999999999999999999998864

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.03  E-value=2.4e-11  Score=75.16  Aligned_cols=69  Identities=29%  Similarity=0.401  Sum_probs=60.7

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCC-CHHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 030405           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILDFEEFARAL  111 (178)
Q Consensus        41 ~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~i~~~ef~~~~  111 (178)
                      .++++++..++..|..+|.+  ++|.|+..+|..++...+.. ....++.+|+.+|.+++|.|+|+||+.++
T Consensus        16 ~l~~~~i~~l~~~F~~~D~d--~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          16 RLSEEEIGGLKELFKMIDTD--NSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             SSCSSSTTTTTTHHHHHCTT--CSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             hCCHHHHHHHHHHHHHHcCC--CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            47888888899999999999  99999999999999886543 45678999999999999999999998643

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=99.02  E-value=1.1e-09  Score=82.23  Aligned_cols=63  Identities=22%  Similarity=0.297  Sum_probs=54.6

Q ss_pred             HHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           89 RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        89 ~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .+|..+|.+++|.|+..+|..++..+.-....++.+..+|+.+|.|++|.|+++||.++|--+
T Consensus       257 ~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml~~  319 (321)
T d1ij5a_         257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLLM  319 (321)
T ss_dssp             HHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCcHHHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence            468889999999999999999998776433556788999999999999999999999998554

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.99  E-value=8.9e-10  Score=66.09  Aligned_cols=68  Identities=15%  Similarity=0.147  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHhcC--CCCcccHHHHHHHHHhhCCCCC-hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTK--HNGILDFEEFARALSIFHPNSP-IDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        84 ~~~~~~lf~~~d~~--~~g~i~~~ef~~~~~~~~~~~~-~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ...++.+|+.||.+  ++|.|+.+|+..++..+..+.. ....+..+|+.+|.|++|.|+++||..+|.++
T Consensus         4 ~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~   74 (76)
T d1qx2a_           4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence            34566777777553  3577777777777776543222 22357777777888888888888877777654

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.6e-09  Score=65.95  Aligned_cols=61  Identities=15%  Similarity=0.193  Sum_probs=42.1

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      +.++|..+|.+++|.|+.+||..++..+.- ..+++.+..+|+.+|.+++|.|++.||...+
T Consensus        22 l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~-~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          22 ITQEFENFDTMKTNTISREEFRAICNRRVQ-ILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHHHTC-CCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHCCCCCceEChhHHHHHHHHhCC-CCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            456777777777777777777777776654 4556667777777777777777777776543

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.94  E-value=5.4e-10  Score=71.65  Aligned_cols=78  Identities=17%  Similarity=0.312  Sum_probs=61.3

Q ss_pred             HHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC----CCCHHHHHHHHHHHhcCCCCcccHHHHH
Q 030405           33 PEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN----KKESLFADRVFDLFDTKHNGILDFEEFA  108 (178)
Q Consensus        33 ~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~----~~~~~~~~~lf~~~d~~~~g~i~~~ef~  108 (178)
                      .+.+.....++......++.+|+.+|.+  ++|+|+..+|+.++....    ......++.+|+.+|.|++|.|+|+||.
T Consensus        26 ~~~F~~~~~~~~~~~~~l~~~F~~~D~d--~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~  103 (108)
T d1rroa_          26 PQKFFQTSGLSKMSASQVKDIFRFIDND--QSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQ  103 (108)
T ss_dssp             HHHHHHHHSGGGSCHHHHHHHHHHHCTT--CSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHH
T ss_pred             HHHHHHHHccCcCCHHHHHHHHhhhcCC--CCCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCCeEeHHHHH
Confidence            4444444444555556788999999999  999999999999886532    2345678999999999999999999999


Q ss_pred             HHHH
Q 030405          109 RALS  112 (178)
Q Consensus       109 ~~~~  112 (178)
                      .++.
T Consensus       104 ~~m~  107 (108)
T d1rroa_         104 EMVH  107 (108)
T ss_dssp             HHHT
T ss_pred             HHHc
Confidence            8874

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.7e-09  Score=66.66  Aligned_cols=67  Identities=24%  Similarity=0.428  Sum_probs=48.3

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      +++++..++.+.|..+| +  ++|+|+..++..++...+.. ...++.+++.+|.+++|.|+++||+.++.
T Consensus         4 ls~ee~~~y~~~F~~~D-~--~~G~i~~~el~~~l~~~gl~-~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~   70 (95)
T d2jxca1           4 VKPEDKAKYDAIFDSLS-P--VNGFLSGDKVKPVLLNSKLP-VDILGRVWELSDIDHDGMLDRDEFAVAMF   70 (95)
T ss_dssp             SCHHHHHHHHHHHHHTC-C--BTTEEEHHHHHHHHTTSSCC-HHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhC-C--CCCceeHHHHHHHHHHcCCC-HHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence            56777777778887777 5  67788888887777665543 34567777777777777788888765554

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.93  E-value=1.4e-09  Score=65.19  Aligned_cols=67  Identities=22%  Similarity=0.297  Sum_probs=49.9

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhcCC---CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhC
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFKTN---KKESLFADRVFDLFDTKHNGILDFEEFARALSIFH  115 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~---~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~  115 (178)
                      .|+.+|+.+|.+..++|+|+..+|..++...+   ......+..+++.+|.+++|.|+|+||+.++..+.
T Consensus         6 el~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~~   75 (76)
T d1qx2a_           6 EIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKIS   75 (76)
T ss_dssp             HHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHHc
Confidence            45566666543311469999999999987632   22233478999999999999999999999987654

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=98.93  E-value=1.8e-09  Score=69.06  Aligned_cols=78  Identities=15%  Similarity=0.264  Sum_probs=61.1

Q ss_pred             HHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC----CCCHHHHHHHHHHHhcCCCCcccHHHHH
Q 030405           33 PEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN----KKESLFADRVFDLFDTKHNGILDFEEFA  108 (178)
Q Consensus        33 ~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~----~~~~~~~~~lf~~~d~~~~g~i~~~ef~  108 (178)
                      ..++.....++......++..|..+|.+  ++|+|+..+|..++....    ......++.+|+.+|.+++|.|+|+||+
T Consensus        25 ~~eF~~~~~l~~~~~~~l~~~F~~~D~d--~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~  102 (107)
T d2pvba_          25 HKEFFAKVGLASKSLDDVKKAFYVIDQD--KSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFA  102 (107)
T ss_dssp             HHHHHHHHTGGGSCHHHHHHHHHHHCTT--CSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             HHHHHHHHhcccCCHHHHHHHHHhhccC--CCCcCcHHHHHHHHHHhhcccccCCHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence            3333344344444556788999999999  999999999999886632    2345678999999999999999999999


Q ss_pred             HHHH
Q 030405          109 RALS  112 (178)
Q Consensus       109 ~~~~  112 (178)
                      .++.
T Consensus       103 ~~m~  106 (107)
T d2pvba_         103 AMIK  106 (107)
T ss_dssp             HHHH
T ss_pred             HHHc
Confidence            8764

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=1.7e-09  Score=67.66  Aligned_cols=70  Identities=29%  Similarity=0.383  Sum_probs=62.4

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      +|+++.+++...|+.+|++  ++|.|+..++..++...+.. ...++.+|+.+|.+++|.|+++||..++..+
T Consensus         4 lt~~e~~~~~~~F~~~D~d--~~G~is~~e~~~~l~~~~l~-~~~l~~i~~~~D~d~dG~l~~~EF~~am~Li   73 (95)
T d1c07a_           4 VSPAEKAKYDEIFLKTDKD--MDGFVSGLEVREIFLKTGLP-STLLAHIWSLCDTKDCGKLSKDQFALAFHLI   73 (95)
T ss_dssp             SCSHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHTTTCC-HHHHHHHHHHHCTTCSSSEETTTHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCC--CCCCCcHHHHHHHHHhcCCC-HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence            6888999999999999999  99999999999999886654 5668999999999999999999999877543

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=2.8e-09  Score=64.91  Aligned_cols=64  Identities=17%  Similarity=0.302  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 030405           46 EIEALYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHNGILDFEEFARAL  111 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~  111 (178)
                      ....+..+|..+|.+  ++|.|+..+|..++...+ ...+..+..+|..+|.+++|.|+|.+|+..+
T Consensus        18 ~~~~l~~~F~~~D~~--~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          18 HYHAITQEFENFDTM--KTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             THHHHHHHHHHHCTT--CSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCC--CCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            456799999999999  999999999999987744 3446678999999999999999999999865

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=2.4e-09  Score=67.47  Aligned_cols=74  Identities=15%  Similarity=0.128  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh-hcCCCCCH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT-ESGMNLSD  161 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~-~~~~~l~~  161 (178)
                      ...+.+|+.+|.+++|.|+.+++..++...   +.+.+.+..+|+++|.|++|.|+++||..+|+-+.. ..|.+++.
T Consensus        11 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~s---~L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~Li~~~q~g~~l~~   85 (99)
T d1qjta_          11 PVYEKYYRQVEAGNTGRVLALDAAAFLKKS---GLPDLILGKIWDLADTDGKGVLSKQEFFVALRLVACAQNGLEVSL   85 (99)
T ss_dssp             THHHHHHHHHCCTTSSCCCSHHHHHHHHTS---SSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHHHHTTTCCSSG
T ss_pred             HHHHHHHHHHCCCCCCcccHHHHHHHHHHc---CCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHHcCCCCCc
Confidence            345789999999999999999999998753   567889999999999999999999999988876533 23444543

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=98.89  E-value=5.3e-09  Score=65.07  Aligned_cols=67  Identities=22%  Similarity=0.385  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHhh-cccCCCC-CcccHHHHHHHHhcC------CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           46 EIEALYELFKKI-SSAVIDD-GLINKEEFQLALFKT------NKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        46 ~i~~l~~~F~~~-d~~~~~~-g~i~~~ef~~~l~~~------~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      .+..|...|..+ |.+  ++ |+|+..||..+|...      .......++.+|+.+|.|++|.|+|+||+.++..+
T Consensus         7 ~i~~l~~~F~~y~d~d--g~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l   81 (93)
T d1zfsa1           7 AMETLINVFHAHSGKE--GDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (93)
T ss_dssp             HHHHHHHHHHHHGGGS--SCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccC--CCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            466777888776 555  53 788888888877541      12234556777777777777788888877766544

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=2e-09  Score=67.83  Aligned_cols=63  Identities=17%  Similarity=0.156  Sum_probs=45.1

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhC----CC-----------CChhHHHHHHHHhhCCCCCCceeHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFH----PN-----------SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV  149 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~----~~-----------~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~  149 (178)
                      ++.+|+.+|.|++|.|+.+|+..++....    ..           ......+..+|+.+|.|++|.|+++||..+++
T Consensus        18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~   95 (99)
T d1snla_          18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ   95 (99)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence            36677777777777777777777664321    00           01123577899999999999999999998864

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=98.84  E-value=4.9e-09  Score=65.07  Aligned_cols=66  Identities=23%  Similarity=0.465  Sum_probs=41.8

Q ss_pred             HHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcC------CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           46 EIEALYELFKKISSAVIDDGLINKEEFQLALFKT------NKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        46 ~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~------~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      .+..+...|+.+|.+   +|.|+..+|..++...      .......++++|..+|.|++|.|+|+||..++..+
T Consensus         7 ~ie~l~~~F~~yd~d---dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l   78 (92)
T d1a4pa_           7 AMETMMFTFHKFAGD---KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL   78 (92)
T ss_dssp             HHHHHHHHHHHHHGG---GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCC---CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence            466777777777754   5778888887776431      11223345667777777777777777776665443

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=98.83  E-value=6e-10  Score=55.16  Aligned_cols=30  Identities=20%  Similarity=0.597  Sum_probs=27.5

Q ss_pred             hHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405          121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus       121 ~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      +++++.+|+.||+||+|+|+..|++.+|.+
T Consensus         2 eeel~eAF~~FDkDg~G~Is~~EL~~vm~~   31 (33)
T d2hf5a1           2 EEEIREAFRVFDKDGNGYISAAELRHVMTN   31 (33)
T ss_dssp             HHHHHHHHHHHSSSCCSCBCHHHHHHHTTS
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            578999999999999999999999999854

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=98.83  E-value=1.5e-08  Score=62.93  Aligned_cols=66  Identities=20%  Similarity=0.358  Sum_probs=34.2

Q ss_pred             HHHHHHHHHHhh-cccCCCC-CcccHHHHHHHHhc------CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           46 EIEALYELFKKI-SSAVIDD-GLINKEEFQLALFK------TNKKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        46 ~i~~l~~~F~~~-d~~~~~~-g~i~~~ef~~~l~~------~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      .+..+...|+.+ +.+  ++ |.|+..+|+.++..      ........++++|+.+|.|++|.|+|+||..++..
T Consensus         7 ~i~~l~~~F~~ya~~d--g~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~   80 (93)
T d3c1va1           7 ALDVMVSTFHKYSGKE--GDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   80 (93)
T ss_dssp             HHHHHHHHHHHHHTSS--SSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHccCC--CCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Confidence            345566666654 333  32 35666666666533      11223344555566666665666666665555443

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=98.83  E-value=6.9e-09  Score=65.14  Aligned_cols=68  Identities=18%  Similarity=0.269  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHHhh-cccCCC-CCcccHHHHHHHHhcC--C-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           45 SEIEALYELFKKI-SSAVID-DGLINKEEFQLALFKT--N-KKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        45 ~~i~~l~~~F~~~-d~~~~~-~g~i~~~ef~~~l~~~--~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ..+..+...|+.+ |.+  + +|.|+..||..++...  . ......++.+++.+|.|++|.|+|+||+.++..+
T Consensus        11 ~~i~~l~~vF~~y~d~d--g~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l   83 (98)
T d1yuta1          11 ESIETVVTTFFTFARQE--GRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL   83 (98)
T ss_dssp             HHHHHHHHHHHHHHTTS--SSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccC--CCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            4577888888887 455  5 4899999999988652  1 2233346888888888888888888888877654

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.82  E-value=8.1e-09  Score=64.06  Aligned_cols=62  Identities=11%  Similarity=0.068  Sum_probs=54.9

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .+.+|+.+|.+++|.|+.+++..++...   +.+.+.++.+|+.+|.|++|.|+++||..++.-+
T Consensus        11 y~~~F~~~D~d~~G~i~~~e~~~~l~~~---~l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~li   72 (92)
T d1fi6a_          11 YVNQFKTIQPDLNGFIPGSAAKEFFTKS---KLPILELSHIWELSDFDKDGALTLDEFCAAFHLV   72 (92)
T ss_dssp             HHHHHTTTCCSTTCEEEHHHHHHHHHHH---SSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCcccchhHHHHHHHHHHc---cCCHHHHHHHHHHhCCCCCCeecHHHHHHHHHHH
Confidence            5789999999999999999999999876   3567889999999999999999999998666543

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=98.81  E-value=1.6e-08  Score=62.80  Aligned_cols=68  Identities=19%  Similarity=0.318  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHhh-cccCCCCC-cccHHHHHHHHhcC------CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           45 SEIEALYELFKKI-SSAVIDDG-LINKEEFQLALFKT------NKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        45 ~~i~~l~~~F~~~-d~~~~~~g-~i~~~ef~~~l~~~------~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      +.+..+...|+.+ +++  ++| .|+..+|+.++...      .......+.++++.+|.|++|.|+|+||..++..+
T Consensus         6 ~~i~~i~~vF~kya~~d--Gd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l   81 (93)
T d1ksoa_           6 QAVAAIVCTFQEYAGRC--GDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL   81 (93)
T ss_dssp             HHHHHHHHHHHHHHTSS--SCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCcC--CCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            4577888888876 666  777 59999999888551      12235567888888888888888888888777654

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=2.7e-09  Score=68.50  Aligned_cols=69  Identities=16%  Similarity=0.237  Sum_probs=48.2

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        42 ~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      +++++.+++...|..+|++  ++|+|+..+++.++.+.+... ..++.+++.+|.+++|.|+++||..++..
T Consensus        16 lt~ee~~~y~~lF~~~D~d--~~G~Is~~e~~~~l~~s~L~~-~~L~~Iw~l~D~d~dG~l~~~EF~~am~L   84 (110)
T d1iq3a_          16 ITEEQREYYVNQFRSLQPD--PSSFISGSVAKNFFTKSKLSI-PELSYIWELSDADCDGALTLPEFCAAFHL   84 (110)
T ss_dssp             CSSSSHHHHHHHHHHHCCS--SSSEEEHHHHHHHCCSSSCSS-CCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHhCCC--cccchhHHHHHHHHHhhccch-HHHHHHHHHhccCCCCeECHHHHHHHHHH
Confidence            6666777777777777777  777787777777776544433 23577777777777777777777765543

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.80  E-value=1.6e-09  Score=65.24  Aligned_cols=67  Identities=24%  Similarity=0.344  Sum_probs=33.9

Q ss_pred             HHHHHHHHhhcccCCCCCcccHHHHHHHHhcC--C-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           48 EALYELFKKISSAVIDDGLINKEEFQLALFKT--N-KKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        48 ~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~--~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ..|...|+.+|....++|.|+..+|+.++...  . ......++.+++.+|.|++|.|+|+||+.++..+
T Consensus         7 ~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l   76 (78)
T d1cb1a_           7 AELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             HHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            44555555554210124566666666665441  1 1112234556666666666666666666555443

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=98.76  E-value=1.1e-08  Score=63.47  Aligned_cols=65  Identities=15%  Similarity=0.126  Sum_probs=53.7

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCC----CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHP----NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~----~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      +..+|..+|.+ +|.|+.+||..++.....    .....+.+..+|+.+|.|+||.|+.+||..++..+.
T Consensus        11 l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l~   79 (92)
T d1a4pa_          11 MMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT   79 (92)
T ss_dssp             HHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHH
Confidence            56789999987 799999999999875321    123456789999999999999999999999998764

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=98.75  E-value=4.2e-08  Score=59.98  Aligned_cols=70  Identities=24%  Similarity=0.384  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc------CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           45 SEIEALYELFKKISSAVIDDGLINKEEFQLALFK------TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        45 ~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~------~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ..|..+...|++++...++.+.|+..||+.++..      ........++.+++.+|.|++|.|+|+||..++..+
T Consensus         5 ~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l   80 (87)
T d1e8aa_           5 EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA   80 (87)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence            4577888888887543112346999999888865      112234567888888888888888888888777654

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=98.71  E-value=8.2e-08  Score=59.48  Aligned_cols=66  Identities=11%  Similarity=0.036  Sum_probs=52.9

Q ss_pred             HHHHHHHH-hcCCC-CcccHHHHHHHHHhhC----CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           87 ADRVFDLF-DTKHN-GILDFEEFARALSIFH----PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        87 ~~~lf~~~-d~~~~-g~i~~~ef~~~~~~~~----~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      +..+|..+ +.+++ |.|+.+||..++....    .....++.++.+|+.+|.|+||.|+++||..+|.++.
T Consensus        11 l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l~   82 (93)
T d3c1va1          11 MVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIA   82 (93)
T ss_dssp             HHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Confidence            45778877 44444 5799999999987532    2246678899999999999999999999999998874

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=6.2e-08  Score=60.28  Aligned_cols=61  Identities=21%  Similarity=0.304  Sum_probs=53.3

Q ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        87 ~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .+++|+.+| +++|.|+.+++..++...   +.+.+.++.+|..+|.|++|+|+++||.-++.-+
T Consensus        12 y~~~F~~~D-~~~G~i~~~el~~~l~~~---gl~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~Li   72 (95)
T d2jxca1          12 YDAIFDSLS-PVNGFLSGDKVKPVLLNS---KLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV   72 (95)
T ss_dssp             HHHHHHHTC-CBTTEEEHHHHHHHHTTS---SCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHhC-CCCCceeHHHHHHHHHHc---CCCHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHH
Confidence            578999999 789999999999988654   4577889999999999999999999998776644

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=98.68  E-value=4.1e-08  Score=60.33  Aligned_cols=68  Identities=21%  Similarity=0.346  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHhh-cccCCCCC-cccHHHHHHHHhc---C-CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           45 SEIEALYELFKKI-SSAVIDDG-LINKEEFQLALFK---T-NKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        45 ~~i~~l~~~F~~~-d~~~~~~g-~i~~~ef~~~l~~---~-~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      +.+..+...|+.+ +++  ++| .|+..+|..++..   . ....+..++.+++.+|.|++|.|+|+||..++..+
T Consensus         6 ~ai~~ii~vF~kya~~d--g~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l   79 (89)
T d1k8ua_           6 QAIGLLVAIFHKYSGRE--GDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL   79 (89)
T ss_dssp             HHHHHHHHHHHHHHTSS--SCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccC--CCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence            4577788888877 666  666 6899998888755   1 12234557888888888888888888888776543

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=98.68  E-value=6e-08  Score=60.12  Aligned_cols=66  Identities=18%  Similarity=0.101  Sum_probs=53.8

Q ss_pred             HHHHHHHH-hcCC-CCcccHHHHHHHHHhhCC----CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           87 ADRVFDLF-DTKH-NGILDFEEFARALSIFHP----NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        87 ~~~lf~~~-d~~~-~g~i~~~ef~~~~~~~~~----~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      +..+|..+ |.++ +|.|+.+||..++.....    ....++.+..+|+.+|.|++|.|+.+||..+|..+.
T Consensus        11 l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l~   82 (93)
T d1zfsa1          11 LINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT   82 (93)
T ss_dssp             HHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            45677776 6775 489999999999876542    234568899999999999999999999999998763

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.67  E-value=2.8e-08  Score=59.60  Aligned_cols=68  Identities=16%  Similarity=0.184  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHhc--CCCCcccHHHHHHHHHhhCCC-CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDT--KHNGILDFEEFARALSIFHPN-SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        84 ~~~~~~lf~~~d~--~~~g~i~~~ef~~~~~~~~~~-~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ...+..+|..|+.  +++|.|+.+||..++...... ....+.+..+++.+|.|++|.|+++||..+|.++
T Consensus         6 ~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l   76 (78)
T d1cb1a_           6 PAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             HHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            4457889999975  345899999999999887542 2234568899999999999999999999999876

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=98.61  E-value=2.5e-08  Score=62.74  Aligned_cols=68  Identities=22%  Similarity=0.330  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCC--------CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           44 VSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNK--------KESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        44 ~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~--------~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      +..|..+...|+.++ +  ++|.|+..||..++....+        .....++.+|+.+|.|++|.|+|+||+.++..+
T Consensus         6 E~~i~~l~~~F~~y~-~--~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l   81 (100)
T d1psra_           6 ERSIIGMIDMFHKYT-R--RDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI   81 (100)
T ss_dssp             HHHHHHHHHHHHHTC-C--TTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc-C--CCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            456788888998887 3  6899999999988855211        112235677888888888888888887777543

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=3.7e-08  Score=63.02  Aligned_cols=65  Identities=8%  Similarity=0.029  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      ......+|+.+|.+++|.|+.+++..++...   +.+.+.+..+|+++|.|++|.|+++||..+|.-+
T Consensus        21 ~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s---~L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~Li   85 (110)
T d1iq3a_          21 REYYVNQFRSLQPDPSSFISGSVAKNFFTKS---KLSIPELSYIWELSDADCDGALTLPEFCAAFHLI   85 (110)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHCCSS---SCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCcccchhHHHHHHHHHhh---ccchHHHHHHHHHhccCCCCeECHHHHHHHHHHH
Confidence            4456889999999999999999999887543   4566779999999999999999999999777644

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=98.61  E-value=3.3e-08  Score=60.52  Aligned_cols=68  Identities=15%  Similarity=0.248  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHHhh-cccCCCCCc-ccHHHHHHHHhc-CC-CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           45 SEIEALYELFKKI-SSAVIDDGL-INKEEFQLALFK-TN-KKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        45 ~~i~~l~~~F~~~-d~~~~~~g~-i~~~ef~~~l~~-~~-~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ..+..+...|+.+ +++  ++|. ++..+|+.++.. .+ ...+..++.+++.+|.|++|.|+|+||..++..+
T Consensus         7 ~ai~~ii~~F~kya~~d--G~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~l   78 (87)
T d1xk4a1           7 KALNSIIDVYHKYSLIK--GNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM   78 (87)
T ss_dssp             HHHHHHHHHHHHHHTSS--SCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccC--CCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            4567888888877 666  6664 588888888754 21 1122346778888888888888888888777544

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=98.59  E-value=1.2e-07  Score=59.31  Aligned_cols=67  Identities=13%  Similarity=0.139  Sum_probs=52.8

Q ss_pred             HHHHHHHH-hcCC-CCcccHHHHHHHHHhhCCCC-ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh
Q 030405           87 ADRVFDLF-DTKH-NGILDFEEFARALSIFHPNS-PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT  153 (178)
Q Consensus        87 ~~~lf~~~-d~~~-~g~i~~~ef~~~~~~~~~~~-~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~  153 (178)
                      +..+|..| +.++ +|.|+..||..++....... ...+.+..+|+.+|.|++|.|+++||..++..+..
T Consensus        16 l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l~~   85 (98)
T d1yuta1          16 VVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELAK   85 (98)
T ss_dssp             HHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHHH
Confidence            35567666 5555 49999999999998765422 23456899999999999999999999999987643

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=98.58  E-value=3.3e-07  Score=56.13  Aligned_cols=70  Identities=24%  Similarity=0.398  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc------CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           45 SEIEALYELFKKISSAVIDDGLINKEEFQLALFK------TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        45 ~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~------~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ..+..+...|++++...+..+.+++.+|+.++..      ........++.+++.+|.|++|.|+|+||..++..+
T Consensus         6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~l   81 (90)
T d3cr5x1           6 KAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMI   81 (90)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            3567888999887643112357999999999866      122335668999999999999999999998877654

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.56  E-value=9.9e-08  Score=59.80  Aligned_cols=62  Identities=23%  Similarity=0.385  Sum_probs=53.9

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ....|+.+|.+  ++|+|+..++..++...+.. ...+..+|+.+|.+++|.++++||..++..+
T Consensus        13 y~~~F~~~D~d--~~G~i~~~e~~~~l~~s~L~-~~~L~~i~~~~D~d~dG~L~~~EF~~am~Li   74 (99)
T d1qjta_          13 YEKYYRQVEAG--NTGRVLALDAAAFLKKSGLP-DLILGKIWDLADTDGKGVLSKQEFFVALRLV   74 (99)
T ss_dssp             HHHHHHHHCCT--TSSCCCSHHHHHHHHTSSSC-HHHHHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHCCC--CCCcccHHHHHHHHHHcCCc-HHHHHHHHHHHcCCCCCccCHHHHHHHHHHH
Confidence            45789999999  99999999999999887654 5568999999999999999999998877543

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=5.9e-08  Score=60.82  Aligned_cols=61  Identities=18%  Similarity=0.335  Sum_probs=49.0

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHHHhcC-------CCC----------CHHHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLALFKT-------NKK----------ESLFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~-------~~~----------~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      ++..|..+|.+  ++|.|+..||..++...       ...          ....++.+|..+|.|++|.|+++||+..+.
T Consensus        18 ~r~~F~~~D~D--gdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~   95 (99)
T d1snla_          18 PKTFFILHDIN--SDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ   95 (99)
T ss_dssp             HHHHHHHHCSS--CCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHCCC--CCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence            56789999999  99999999999987531       000          122467899999999999999999998764

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.54  E-value=7.9e-08  Score=45.64  Aligned_cols=32  Identities=22%  Similarity=0.594  Sum_probs=28.6

Q ss_pred             hhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405          120 IDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus       120 ~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      .++++...|++||+|+||+|+.+||..++++.
T Consensus         2 sEeELae~FRifDkNaDGyiD~eEl~~ilr~t   33 (34)
T d1ctda_           2 SEEELANAFRIFDKNADGYIDIEELGEILRAT   33 (34)
T ss_dssp             HHHHHHHHHHTTCCSSSSCBCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHccCCcccccHHHHHHHHHhc
Confidence            46788999999999999999999999998653

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=98.46  E-value=5.9e-07  Score=55.48  Aligned_cols=70  Identities=29%  Similarity=0.427  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc------CCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           45 SEIEALYELFKKISSAVIDDGLINKEEFQLALFK------TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        45 ~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~------~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ..+..+...|+.++...+..+.++..+|+.++..      ........++++++.+|.|++|.|+|+||..++..+
T Consensus         6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l   81 (95)
T d1qlsa_           6 RCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL   81 (95)
T ss_dssp             HHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            3467788999887643112357999999998855      122345567899999999999999999998877654

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=98.45  E-value=3.9e-07  Score=56.26  Aligned_cols=65  Identities=9%  Similarity=-0.031  Sum_probs=52.8

Q ss_pred             HHHHHHH-hcCCCC-cccHHHHHHHHHhhCC----CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           88 DRVFDLF-DTKHNG-ILDFEEFARALSIFHP----NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        88 ~~lf~~~-d~~~~g-~i~~~ef~~~~~~~~~----~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      -.+|..+ +.+++| .|+..||..++.....    ....++.+..+++.+|.|+||.|+.+||..+|..++
T Consensus        12 ~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l~   82 (93)
T d1ksoa_          12 VCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLC   82 (93)
T ss_dssp             HHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHH
T ss_pred             HHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            4567665 777787 5999999999876432    234567899999999999999999999999998874

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=98.40  E-value=1.6e-06  Score=52.16  Aligned_cols=69  Identities=25%  Similarity=0.362  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--CC-C----CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           45 SEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TN-K----KESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        45 ~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~~-~----~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      ..+..+...|+.++..-+..+.++..||+.++..  +. .    .....++.+++.+|.|++|.|+|+||..++..
T Consensus         7 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~   82 (83)
T d1xk4c1           7 RNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR   82 (83)
T ss_dssp             HHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence            3467888999988754223458999999999866  11 1    23345789999999999999999999987754

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=98.37  E-value=1.7e-07  Score=58.84  Aligned_cols=63  Identities=13%  Similarity=0.164  Sum_probs=48.8

Q ss_pred             HHHHHHhcCCCCcccHHHHHHHHHhhCCC------CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           89 RVFDLFDTKHNGILDFEEFARALSIFHPN------SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        89 ~lf~~~d~~~~g~i~~~ef~~~~~~~~~~------~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      .+|..++ +++|.|+..||..++......      ...+..+..+|+.+|.|++|.|+++||..++..+.
T Consensus        14 ~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l~   82 (100)
T d1psra_          14 DMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDIA   82 (100)
T ss_dssp             HHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence            4455554 678999999999998765321      11234578899999999999999999999998763

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=98.37  E-value=9.6e-07  Score=54.42  Aligned_cols=70  Identities=17%  Similarity=0.318  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc--C----CCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           45 SEIEALYELFKKISSAVIDDGLINKEEFQLALFK--T----NKKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        45 ~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~--~----~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ..+..+...|++++...+..+.+++.||+.++..  +    ....+..++.+++.+|.|++|.|+|+||..++..+
T Consensus         6 ~ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~l   81 (94)
T d1j55a_           6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI   81 (94)
T ss_dssp             HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            3467888999988643112358999999998865  1    11223457899999999999999999998877654

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=9.5e-07  Score=56.90  Aligned_cols=90  Identities=16%  Similarity=0.170  Sum_probs=66.6

Q ss_pred             CCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHh------cCCCCcccHHHHHHHHHhhCCCCC-hhHHHHHHHHhhCCCC
Q 030405           63 DDGLINKEEFQLALFKTNKKESLFADRVFDLFD------TKHNGILDFEEFARALSIFHPNSP-IDDKIEFSFQLYDLKQ  135 (178)
Q Consensus        63 ~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d------~~~~g~i~~~ef~~~~~~~~~~~~-~~e~~~~~F~~~D~d~  135 (178)
                      .++.++++++..+........ ..++.+++.|.      ...+|.|++++|..++..+...++ +...+..+|+.||.++
T Consensus         4 ~~s~l~p~~l~~L~~~T~fs~-~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~   82 (118)
T d1tuza_           4 ERGLISPSDFAQLQKYMEYST-KKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGH   82 (118)
T ss_dssp             CCSCSCHHHHHHHHHHHHHCC-CCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCC
T ss_pred             ccCCCCHHHHHHHHHHcCCCH-HHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHcccc
Confidence            467799999988765522221 12456666662      135789999999999987766443 4567899999999997


Q ss_pred             C--------CceeHHHHHHHHHHHHh
Q 030405          136 Q--------GFIERQEVKQMVVATLT  153 (178)
Q Consensus       136 ~--------G~I~~~e~~~~l~~~~~  153 (178)
                      +        |+|+..||...|..+.+
T Consensus        83 d~~~~~~~~g~I~f~efv~~LS~l~~  108 (118)
T d1tuza_          83 CLNETNVTKDVVCLNDVSCYFSLLEG  108 (118)
T ss_dssp             CTTCCCCCSCCEEHHHHHHHHHHHHS
T ss_pred             ccccccCCCceeeHHHHHHHHHHHcC
Confidence            7        89999999999987743

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=98.36  E-value=5.6e-07  Score=54.85  Aligned_cols=65  Identities=17%  Similarity=0.163  Sum_probs=50.2

Q ss_pred             HHHHHHH-hcCCCCc-ccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           88 DRVFDLF-DTKHNGI-LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        88 ~~lf~~~-d~~~~g~-i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      -.+|..+ +.+++|. ++.+||..++..........+.+..+++..|.|+||.|+++||..++..+.
T Consensus        13 i~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~la   79 (87)
T d1xk4a1          13 IDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMG   79 (87)
T ss_dssp             HHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            3456555 7777775 599999998876443233345688999999999999999999999998764

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=98.32  E-value=7.1e-07  Score=54.59  Aligned_cols=66  Identities=14%  Similarity=0.066  Sum_probs=52.4

Q ss_pred             HHHHHHH-hcCCCC-cccHHHHHHHHHhhCCC--CChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHh
Q 030405           88 DRVFDLF-DTKHNG-ILDFEEFARALSIFHPN--SPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT  153 (178)
Q Consensus        88 ~~lf~~~-d~~~~g-~i~~~ef~~~~~~~~~~--~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~  153 (178)
                      -.+|..+ +.+++| .++..||..++......  ...++.+..+++.+|.|+||.|+.+||..++..+..
T Consensus        12 i~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~la~   81 (89)
T d1k8ua_          12 VAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGALAL   81 (89)
T ss_dssp             HHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHH
Confidence            4567666 777777 69999999998763221  234577999999999999999999999999988743

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=98.28  E-value=4e-06  Score=50.85  Aligned_cols=65  Identities=23%  Similarity=0.214  Sum_probs=51.2

Q ss_pred             HHHHHHHhc-CCC-CcccHHHHHHHHHhhC----CCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           88 DRVFDLFDT-KHN-GILDFEEFARALSIFH----PNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        88 ~~lf~~~d~-~~~-g~i~~~ef~~~~~~~~----~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      -.+|..++. +++ +.|+..||..++....    .....++.+..+++..|.|+||.|+.+||..++..++
T Consensus        11 i~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l~   81 (87)
T d1e8aa_          11 VNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIAL   81 (87)
T ss_dssp             HHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHH
Confidence            456776644 433 4699999999997532    2244567899999999999999999999999998874

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=6.5e-08  Score=66.57  Aligned_cols=97  Identities=11%  Similarity=0.106  Sum_probs=63.0

Q ss_pred             HHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCCC---------
Q 030405           48 EALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS---------  118 (178)
Q Consensus        48 ~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~~---------  118 (178)
                      ..+...|...|.+  ++|.|+.++|..++.....  .+.+..+|..+|.+++|.|+.++|..++...+...         
T Consensus        45 ~~~~~~~~~~D~~--~~~~i~F~eF~~~~~~l~~--r~ei~~~F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~  120 (170)
T d2zkmx1          45 SACHLPKGKNDAI--NPEDFPEPVYKSFLMSLCP--RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPP  120 (170)
T ss_dssp             HHTTCCCCTTCEE--CGGGCCHHHHHHHHHHHSC--CHHHHTTCC--------CCCHHHHHHHHHHTCC-----------
T ss_pred             HHHhhhhcccccc--CCCccCHHHHHHHHhccCC--HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhcccc
Confidence            3445556677877  8899999999998866432  34468899999999999999999999998766421         


Q ss_pred             ChhHHHHHHHHhhCCCC----CCceeHHHHHHHH
Q 030405          119 PIDDKIEFSFQLYDLKQ----QGFIERQEVKQMV  148 (178)
Q Consensus       119 ~~~e~~~~~F~~~D~d~----~G~I~~~e~~~~l  148 (178)
                      ...+.++.+++.|..+.    +|.|+.++|..+|
T Consensus       121 ~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL  154 (170)
T d2zkmx1         121 ARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFL  154 (170)
T ss_dssp             ----CHHHHHHHHCCC--------CCHHHHHHHH
T ss_pred             CCHHHHHHHHHHHccccccccCCeECHHHHHHHH
Confidence            13355778888887654    4899999999988

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=97.88  E-value=6.8e-05  Score=45.48  Aligned_cols=65  Identities=15%  Similarity=0.166  Sum_probs=50.8

Q ss_pred             HHHHHHHhc-CCC-CcccHHHHHHHHHh----hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           88 DRVFDLFDT-KHN-GILDFEEFARALSI----FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        88 ~~lf~~~d~-~~~-g~i~~~ef~~~~~~----~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      -.+|..++. +++ +.++..||..++..    +.......+.+..+|+.+|.|+||.|+.+||..++..+.
T Consensus        12 i~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~la   82 (90)
T d3cr5x1          12 IDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMIT   82 (90)
T ss_dssp             HHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence            345666643 333 57999999999986    344345567799999999999999999999999998763

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=97.63  E-value=3.8e-05  Score=37.41  Aligned_cols=28  Identities=18%  Similarity=0.392  Sum_probs=21.6

Q ss_pred             HHHHHHHhhcccCCCCCcccHHHHHHHHhc
Q 030405           49 ALYELFKKISSAVIDDGLINKEEFQLALFK   78 (178)
Q Consensus        49 ~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~   78 (178)
                      .++++|..+|++  ++|+|+..++..++..
T Consensus         4 el~eAF~~FDkD--g~G~Is~~EL~~vm~~   31 (33)
T d2hf5a1           4 EIREAFRVFDKD--GNGYISAAELRHVMTN   31 (33)
T ss_dssp             HHHHHHHHHSSS--CCSCBCHHHHHHHTTS
T ss_pred             HHHHHHHHhCCC--CCCcCcHHHHHHHHHH
Confidence            577788888888  8888888888877643

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=97.62  E-value=0.00011  Score=44.93  Aligned_cols=63  Identities=14%  Similarity=0.160  Sum_probs=48.7

Q ss_pred             HHHHHHhc-CCC-CcccHHHHHHHHHh-----hCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           89 RVFDLFDT-KHN-GILDFEEFARALSI-----FHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        89 ~lf~~~d~-~~~-g~i~~~ef~~~~~~-----~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      .+|..+.. +++ +.++..||..++..     +.. ....+.+..+++.+|.|+||.|+.+||..++..++
T Consensus        13 ~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~-~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~la   82 (95)
T d1qlsa_          13 AIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQN-QKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGLA   82 (95)
T ss_dssp             HHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHH-CCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence            45655543 333 67999999998864     222 34557799999999999999999999999998764

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=97.61  E-value=0.00015  Score=44.27  Aligned_cols=65  Identities=14%  Similarity=0.088  Sum_probs=47.0

Q ss_pred             HHHHHHHhc-CC-CCcccHHHHHHHHHhh----CCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           88 DRVFDLFDT-KH-NGILDFEEFARALSIF----HPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        88 ~~lf~~~d~-~~-~g~i~~~ef~~~~~~~----~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      -.+|..+.. ++ .+.++..||..++..-    .......+.+..+++.+|.|+||.|+.+||..++..++
T Consensus        12 i~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~la   82 (94)
T d1j55a_          12 IDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAIT   82 (94)
T ss_dssp             HHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence            345666643 23 2579999999998752    22233456799999999999999999999999998763

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=6.8e-05  Score=49.66  Aligned_cols=59  Identities=20%  Similarity=0.280  Sum_probs=48.8

Q ss_pred             HHHHHHHHhcC-CCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405           87 ADRVFDLFDTK-HNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus        87 ~~~lf~~~d~~-~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      +.-.|..+|.| ++|.++..|+..+...+.   ..+.-++..|+..|.|+||.|+..|+...+
T Consensus        79 v~W~F~~LD~n~~D~~L~~~EL~~l~~~L~---~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf  138 (151)
T d1sraa_          79 VHWQFGQLDQHPIDGYLSHTELAPLRAPLI---PMEHCTTRFFETCDLDNDKYIALDEWAGCF  138 (151)
T ss_dssp             HHHHHHHHCCTTCSSEECTTTTGGGGSTTS---TTGGGHHHHHHHHCTTCSSSEEHHHHHHHT
T ss_pred             ceeehhhcCCCCCCCccCHHHHHHHHHhhc---CCchHHHHHHHHhcCCCCCcCCHHHHHHHc
Confidence            45679999999 589999999877554332   345668999999999999999999999886

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=97.36  E-value=0.00057  Score=40.54  Aligned_cols=63  Identities=14%  Similarity=0.131  Sum_probs=46.9

Q ss_pred             HHHHHHHhcC-C-CCcccHHHHHHHHHhh----CCCC-ChhHHHHHHHHhhCCCCCCceeHHHHHHHHHH
Q 030405           88 DRVFDLFDTK-H-NGILDFEEFARALSIF----HPNS-PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA  150 (178)
Q Consensus        88 ~~lf~~~d~~-~-~g~i~~~ef~~~~~~~----~~~~-~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~  150 (178)
                      -.+|..+... + .+.++..||..++..-    ..+. ..+..+..+|+.+|.|+||.|+..||..++.+
T Consensus        13 i~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~   82 (83)
T d1xk4c1          13 INTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR   82 (83)
T ss_dssp             HHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence            3466666542 2 3689999999998853    2212 13345789999999999999999999998854

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.24  E-value=0.00019  Score=33.74  Aligned_cols=28  Identities=29%  Similarity=0.515  Sum_probs=19.1

Q ss_pred             HHHHHHHHHHhcCCCCcccHHHHHHHHH
Q 030405           85 LFADRVFDLFDTKHNGILDFEEFARALS  112 (178)
Q Consensus        85 ~~~~~lf~~~d~~~~g~i~~~ef~~~~~  112 (178)
                      ..+...|+.||+|.+|.|+.+||..++.
T Consensus         4 eELae~FRifDkNaDGyiD~eEl~~ilr   31 (34)
T d1ctda_           4 EELANAFRIFDKNADGYIDIEELGEILR   31 (34)
T ss_dssp             HHHHHHHHTTCCSSSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCcccccHHHHHHHHH
Confidence            4456677777777777777777766654

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0013  Score=43.33  Aligned_cols=61  Identities=16%  Similarity=0.264  Sum_probs=47.2

Q ss_pred             HHHHHHhhcccCCC-CCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 030405           50 LYELFKKISSAVID-DGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSI  113 (178)
Q Consensus        50 l~~~F~~~d~~~~~-~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~  113 (178)
                      +.=.|..+|.+  + +|.++..|+..+.... .+.+.=+...|+.+|.+++|.|++.||..++..
T Consensus        79 v~W~F~~LD~n--~~D~~L~~~EL~~l~~~L-~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~v  140 (151)
T d1sraa_          79 VHWQFGQLDQH--PIDGYLSHTELAPLRAPL-IPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI  140 (151)
T ss_dssp             HHHHHHHHCCT--TCSSEECTTTTGGGGSTT-STTGGGHHHHHHHHCTTCSSSEEHHHHHHHTTC
T ss_pred             ceeehhhcCCC--CCCCccCHHHHHHHHHhh-cCCchHHHHHHHHhcCCCCCcCCHHHHHHHcCC
Confidence            33459999988  6 7899999998754332 233333688999999999999999999998853

>d1eg3a1 a.39.1.7 (A:85-209) Dystrophin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Dystrophin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.041  Score=34.68  Aligned_cols=96  Identities=13%  Similarity=0.256  Sum_probs=60.8

Q ss_pred             cHHHHHhhcCCCHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCcccHHHHHHHH
Q 030405           32 DPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARAL  111 (178)
Q Consensus        32 ~~~~~~~~~~~~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~  111 (178)
                      .++.+++...+.--.+..+.+.|....-+ ..+..++-.++..++           ..+|........+.|+.+.....+
T Consensus        27 KLR~vQK~~~l~lv~l~~~~e~f~~~~l~-~~d~~l~v~~l~~~L-----------~~iy~~l~~~~~~~v~vp~~~dl~   94 (125)
T d1eg3a1          27 KLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDILQIINCL-----------TTIYDRLEQEHNNLVNVPLCVDMC   94 (125)
T ss_dssp             HHHHHHHHTTGGGCCHHHHHHHHHHTTCC-CTTSEEEHHHHHHHH-----------HHHHHHHHHHSTTTCCHHHHHHHH
T ss_pred             HHHHHHHHHhcchhhHHHHHHHHHHcCCC-CCccCCCHHHHHHHH-----------HHHHHHhhhhCcccCChHHHHHHH
Confidence            34555555555444555566666554332 123356666665555           445555555555566666544443


Q ss_pred             HhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405          112 SIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus       112 ~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                                  +.+++..||.+++|.|+.-.++-.|..+
T Consensus        95 ------------LN~LlnvYD~~rtG~i~vls~KvaL~~L  122 (125)
T d1eg3a1          95 ------------LNWLLNVYDTGRTGRIRVLSFKTGIISL  122 (125)
T ss_dssp             ------------HHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred             ------------HHHHHHHhCCCCCCeeeehHHHHHHHHH
Confidence                        6789999999999999999999888664

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.27  E-value=0.051  Score=32.35  Aligned_cols=64  Identities=13%  Similarity=0.063  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHhcCCCCcccHHHHHHHHHhhCCC-CChhHHHHHHHHhhCCCC----CCceeHHHHHHHH
Q 030405           84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPN-SPIDDKIEFSFQLYDLKQ----QGFIERQEVKQMV  148 (178)
Q Consensus        84 ~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~~~~-~~~~e~~~~~F~~~D~d~----~G~I~~~e~~~~l  148 (178)
                      .+.+..+|..+..+ .+.++.++|...+...++. ....+.+..++..|..+.    .|.++.+.|..+|
T Consensus         7 R~ei~~if~~ys~~-~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL   75 (94)
T d1qasa1           7 RAEIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYL   75 (94)
T ss_dssp             CHHHHHHHHHHHTT-SSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHH
T ss_pred             cHHHHHHHHHHhCC-CCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHH
Confidence            45567788887664 3568888888888877653 234566777888886553    3678888888887

>d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Endo-1,4-beta-xylanase Y
species: Clostridium thermocellum [TaxId: 1515]

Probab=95.05  E-value=0.056  Score=29.32  Aligned_cols=54  Identities=11%  Similarity=0.113  Sum_probs=41.0

Q ss_pred             hcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHH
Q 030405           95 DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT  151 (178)
Q Consensus        95 d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~  151 (178)
                      |.+++|.|+..++..+...+.......   ...|...|.|++|.|+..++..+.+-+
T Consensus         2 DvN~Dg~vni~D~~~l~~~il~~~~~~---~~~~~aaDvn~Dg~i~i~D~~~l~~~I   55 (59)
T d2cclb1           2 DVNGDGTINSTDLTMLKRSVLRAITLT---DDAKARADVDKNGSINAADVLLLSRYL   55 (59)
T ss_dssp             CTTCSSSCCHHHHHHHHHHHTTSSCCC---HHHHHHHCTTCSSCCSHHHHHHHHHHH
T ss_pred             CCCCCCCCcHHHHHHHHHHHhCCCCCC---hhhhhccccCCCCCCCHHHHHHHHHHH
Confidence            467889999999988877665433322   235677899999999999999887765

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.20  E-value=0.19  Score=29.70  Aligned_cols=62  Identities=10%  Similarity=0.124  Sum_probs=43.1

Q ss_pred             HHHHHHhhcccCCCCCcccHHHHHHHHhc-CC--CCCHHHHHHHHHHHhcCC----CCcccHHHHHHHHHhh
Q 030405           50 LYELFKKISSAVIDDGLINKEEFQLALFK-TN--KKESLFADRVFDLFDTKH----NGILDFEEFARALSIF  114 (178)
Q Consensus        50 l~~~F~~~d~~~~~~g~i~~~ef~~~l~~-~~--~~~~~~~~~lf~~~d~~~----~g~i~~~ef~~~~~~~  114 (178)
                      +...|..+..   +.+.|+.++|..+|.. .+  ......+..++..+..+.    .+.++++.|...+..-
T Consensus        10 i~~if~~ys~---~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~   78 (94)
T d1qasa1          10 IDRAFEEAAG---SAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA   78 (94)
T ss_dssp             HHHHHHHHHT---TSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSS
T ss_pred             HHHHHHHHhC---CCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcCc
Confidence            3444555543   3468999999999865 22  234566789999987653    3679999999988543

>d1pula1 a.39.1.11 (A:18-120) Hypothetical protein c32e8.3 {Caenorhabditis elegans [TaxId: 6239]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: p25-alpha
domain: Hypothetical protein c32e8.3
species: Caenorhabditis elegans [TaxId: 6239]

Probab=91.96  E-value=0.7  Score=27.75  Aligned_cols=69  Identities=13%  Similarity=0.224  Sum_probs=47.9

Q ss_pred             CHHHHHHHHHHHHhhcccCCCCCcccHHHHHHHHhc---CC--CCCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           43 SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK---TN--KKESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        43 ~~~~i~~l~~~F~~~d~~~~~~g~i~~~ef~~~l~~---~~--~~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      ...+++.....|..+-..  .+-.|+...|..++..   ..  ......+.-+|..+-..+. .|+|++|...+..+
T Consensus         3 ~~~~l~~~F~aF~~FG~~--~~~em~~~~f~Kl~kdc~lid~K~~T~tdvDIiF~K~k~k~~-ri~f~~F~~aL~~l   76 (103)
T d1pula1           3 DDADVKKRWDAFTKFGAA--TATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGPKK-KATFDETKKVLAFV   76 (103)
T ss_dssp             CHHHHHHHHHHHHHHTCS--SSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHHTCSSS-CCCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhcCC--CCcCCCHHHHHHHHHHcCCCcCCCCCccchhhhhHhhcCCCC-CcCHHHHHHHHHHH
Confidence            456788888888888532  2336999999988754   21  1223457888998876543 48999998888644

>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: alpha-Actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.28  E-value=0.49  Score=26.53  Aligned_cols=30  Identities=13%  Similarity=0.359  Sum_probs=25.0

Q ss_pred             CChhHHHHHHHHhhCCCCCCceeHHHHHHHH
Q 030405          118 SPIDDKIEFSFQLYDLKQQGFIERQEVKQMV  148 (178)
Q Consensus       118 ~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l  148 (178)
                      .++.+.+..+|+.+ .++..+|+.+|+++-|
T Consensus         4 ~~TaEqv~~aFr~l-A~~KpyVT~~dL~~~L   33 (73)
T d1h8ba_           4 TDTAEQVIASFRIL-ASDKPYILAEELRREL   33 (73)
T ss_dssp             CSTHHHHHHHHHHH-TTSCSSBCHHHHHHHS
T ss_pred             cccHHHHHHHHHHH-hCCCCeeCHHHHHhhc
Confidence            45678899999999 5779999999998754

>d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=90.06  E-value=0.78  Score=24.90  Aligned_cols=46  Identities=15%  Similarity=0.302  Sum_probs=34.3

Q ss_pred             HHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q 030405          122 DKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKV  171 (178)
Q Consensus       122 e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~l~~~~~~~~~~~~  171 (178)
                      ++-..+|.+||.+..+.-...+-..+|..+    |...+..+-+.++++.
T Consensus        14 decmkifdifdrnaeniapvsdtmdmltkl----gqtytkreteaimkea   59 (86)
T d1j7qa_          14 DECMKIFDIFDRNAENIAPVSDTMDMLTKL----GQTYTKRETEAIMKEA   59 (86)
T ss_dssp             HHHHHHHHHHSTTTTSCBCHHHHHHHHHHT----SCCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccccccCCcchHHHHHHHh----hhHHhHHHHHHHHHHh
Confidence            345578888888888888888888887776    7777777777666554

>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Cellulosome endoglucanase SS
species: Clostridium thermocellum [TaxId: 1515]

Probab=88.57  E-value=0.1  Score=29.36  Aligned_cols=53  Identities=11%  Similarity=0.113  Sum_probs=37.7

Q ss_pred             hcCCCCcccHHHHHHHHHhhCCCCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHH
Q 030405           95 DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL  152 (178)
Q Consensus        95 d~~~~g~i~~~ef~~~~~~~~~~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~  152 (178)
                      |.+.+|.|+..+...++..+..... ..    -+...|.|++|.|+..|+..+.+.++
T Consensus         8 DvN~DG~Vd~~D~~~~~~~i~~~~~-~~----~~~~aDvn~DG~Id~~D~~~l~~~il   60 (71)
T d1dava_           8 DVNDDGKVNSTDAVALKRYVLRSGI-SI----NTDNADLNEDGRVNSTDLGILKRYIL   60 (71)
T ss_dssp             CSSSSSBSSGGGHHHHHHHHHCSCS-CC----CGGGTCSSSSSSCSSHHHHHHHHHTT
T ss_pred             ccCCCCCCcHHHHHHHHHHHcCCCC-cC----CCcceecCCCCCcCHHHHHHHHHHHH
Confidence            5678888998888777665543111 11    12357999999999999998887764

>d1wlma1 a.39.1.11 (A:8-145) Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: p25-alpha
domain: Protein cgi-38
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.70  E-value=2.8  Score=26.34  Aligned_cols=49  Identities=20%  Similarity=0.283  Sum_probs=36.8

Q ss_pred             cccHHHHHHHHhcCCC-----CCHHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 030405           66 LINKEEFQLALFKTNK-----KESLFADRVFDLFDTKHNGILDFEEFARALSIF  114 (178)
Q Consensus        66 ~i~~~ef~~~l~~~~~-----~~~~~~~~lf~~~d~~~~g~i~~~ef~~~~~~~  114 (178)
                      .|+...|..++.....     .....++-+|..+-..+...|+|++|...+..+
T Consensus        29 ~m~~~~f~K~~kd~~lid~K~~T~t~~diiF~k~k~k~~r~i~f~~F~~aL~~i   82 (138)
T d1wlma1          29 EMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEEL   82 (138)
T ss_dssp             EEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHcCCCcCCccchhhHHHHHHHhhcCCCcccCHHHHHHHHHHH
Confidence            5999999999865221     223457889999866667789999999888654

>d1wlma1 a.39.1.11 (A:8-145) Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: p25-alpha
domain: Protein cgi-38
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.05  E-value=3.4  Score=25.93  Aligned_cols=86  Identities=13%  Similarity=0.124  Sum_probs=58.4

Q ss_pred             HHHHHHHHhcCC-----CCcccHHHHHHHHHhh--CC-CCChhHHHHHHHHhhCCCCCCceeHHHHHHHHHHHHhhcCCC
Q 030405           87 ADRVFDLFDTKH-----NGILDFEEFARALSIF--HP-NSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMN  158 (178)
Q Consensus        87 ~~~lf~~~d~~~-----~g~i~~~ef~~~~~~~--~~-~~~~~e~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~  158 (178)
                      ++.+|..|-.-+     ...|+-..|..+|...  .. ..-....+..+|...=..+...|++++|.++|..+...-+..
T Consensus        10 L~~~F~~F~~fG~~k~~~~~m~~~~f~K~~kd~~lid~K~~T~t~~diiF~k~k~k~~r~i~f~~F~~aL~~iA~kk~~~   89 (138)
T d1wlma1          10 LEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEELATKRFKG   89 (138)
T ss_dssp             HHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHTHHHHSSS
T ss_pred             HHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHcCCCcCCccchhhHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHhcCC
Confidence            356666665321     2349999999988742  22 234556788899998666778899999999999886666666


Q ss_pred             CCHHHHHHHHHHHH
Q 030405          159 LSDDVIESIIDKVL  172 (178)
Q Consensus       159 l~~~~~~~~~~~~~  172 (178)
                      .+.++..+.+.+.+
T Consensus        90 ~s~~e~~~~i~~~i  103 (138)
T d1wlma1          90 KSKEEAFDAICQLI  103 (138)
T ss_dssp             CCHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHH
Confidence            77665544444443