Citrus Sinensis ID: 030408

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MPAAAAKPPPSSLFPYLILLSILLLFLYSSLLSPPTAKTLSFHSTPCNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSGAKKWKRKGAWRGGYFPKYNVTVAYHRAVLLANYR
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccEEcccccccccccHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHcccccccEEEEEccEEEEEEccccEEEEEEEccccEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccHHHHHHccccccccccccccHHHHHHHHcccEEEEEcccHcHcHHHHHHHHHHHcccccccEEEcccEEEEEEEcccEEEEEEEcccEEEcc
Coil and Loop (DISEMBL)
mpaaaakpppsslfpYLILLSILLLFLYssllspptaktlsfhstpcnlflgkwvlqhpsthkplynetcpfqrnawnclrnqrpnmvlinsykwvpeacdlpqidpvkFLSLMRnknigfvgdslnENFIVSFLCVLRAADSGakkwkrkgawrggyfpkynVTVAYHRAVLLANYR
Flexible Loop (DISEMBL)
mpaaaakpppssLFPYLILLSILLLFLYSSLLSPPTAKTLSFHSTPCNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSgakkwkrkgawrggyfpkynvTVAYHRAVLLANYR
Low Complexity Region (SEG)
MpaaaakpppsslfpylillsilllflyssllsppTAKTLSFHSTPCNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSgakkwkrkgawrggYFPKYNVTVAYHRAVLLANYR
Disordered region (IsUnstruct)
************LFPYLILLSILLLFLYSSLLSPPTAKTLSFHSTPCNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSGAKKWKRKGAWRGGYFPKYNVTVAYHRAVLLAN**
Disordered Region (DISOPRED)
***********SLFPYLILLSILLLFL********************NLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSGAKKWKRKGAWRGGYFPKYNVTVAYHRAVLLANYR
Disordered Region (DISEMBL)
**********SSLFPYLILLSILLLFLYSSLLSPPTAKTLSFHSTPCNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAAD********KGAWRGGYFPKYNVTVAYHRAVLLANYR
Disordered Region (DISPRO)
***AAAKPPPSSLFPYLILLSILLLFLYSS**************TPCNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSGAKKWKRKGAWRGGYFPKYNVTVAYHRAVLLANYR
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPAAAAKPPPSSLFPYLILLSILLLFLYSSLLSPPTAKTLSFHSTPCNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSGAKKWKRKGAWRGGYFPKYNVTVAYHRAVLLANYR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
224060985	392	predicted protein [Populus trichocarpa]	0.955	0.433	0.655	6e-60
357476113	430	hypothetical protein MTR_4g092830 [Medic	0.938	0.388	0.614	2e-55
449438268	400	PREDICTED: uncharacterized protein LOC10	0.859	0.382	0.666	3e-55
388507276	310	unknown [Medicago truncatula]	0.938	0.538	0.609	1e-54
359496248	412	PREDICTED: uncharacterized protein LOC10	0.792	0.342	0.696	5e-54
296088667	413	unnamed protein product [Vitis vinifera]	0.792	0.341	0.696	5e-54
147775551	232	hypothetical protein VITISV_026675 [Viti	0.792	0.607	0.696	8e-54
297794037	407	hypothetical protein ARALYDRAFT_332664 [	0.792	0.346	0.657	2e-49
334188623	401	uncharacterized protein [Arabidopsis tha	0.792	0.351	0.644	2e-48
16226907	325	AT5g64470/T12B11_6 [Arabidopsis thaliana	0.792	0.433	0.644	2e-48

>gi|224060985|ref|XP_002300308.1| predicted protein [Populus trichocarpa] gi|222847566|gb|EEE85113.1| predicted protein [Populus trichocarpa]

 Score =  235 bits (599), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 114/174 (65%), Positives = 135/174 (77%), Gaps = 4/174 (2%)

Query: 7   KPPPSSLFPYLILLSILLLFLYSSLLSPPTAKTLSFHST--PCNLFLGKWVLQHPSTHKP 64
           K PP+   PYLILLS L  ++YS+ L P +  T +  +    CNLF G WVL    + KP
Sbjct: 4   KLPPA--LPYLILLSFLFFYIYSTSLLPHSTTTTTTKTKTTSCNLFKGNWVLDRTKSTKP 61

Query: 65  LYNETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQIDPVKFLSLMRNKNIGFVGD 124
           LY+E+CPF RNAWNCLRNQR NM LINS++WVP+ C+LP+IDP +FL LMRN+NIG VGD
Sbjct: 62  LYDESCPFHRNAWNCLRNQRENMGLINSWRWVPKDCELPKIDPERFLELMRNRNIGLVGD 121

Query: 125 SLNENFIVSFLCVLRAADSGAKKWKRKGAWRGGYFPKYNVTVAYHRAVLLANYR 178
           SLNENF+VSFLC+LR AD  AKKWKRKGAWRG YFPK+NVTVAYHRAVLL+ Y 
Sbjct: 122 SLNENFLVSFLCILRVADGSAKKWKRKGAWRGAYFPKFNVTVAYHRAVLLSKYE 175

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357476113|ref|XP_003608342.1| hypothetical protein MTR_4g092830 [Medicago truncatula] gi|355509397|gb|AES90539.1| hypothetical protein MTR_4g092830 [Medicago truncatula]

 Score =  220 bits (561), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 107/174 (61%), Positives = 130/174 (74%), Gaps = 7/174 (4%)

Query: 10  PSSLFPYLILLSILLLFLYSSLLSPPTAKTLSFHSTP-----CNLFLGKWVLQHPSTHKP 64
           PS LFP+LI+L++  L+ +SS +S  T  + S  S       CNLF G WV      H P
Sbjct: 6   PSHLFPFLIILTLASLYYFSSFISLNTLSSSSSTSPSLTISTCNLFKGTWVFD--PNHTP 63

Query: 65  LYNETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQIDPVKFLSLMRNKNIGFVGD 124
           LY++TCPF RNAWNC+RNQR N+ LINS+KWVP  CD+ +IDP +FL  MRNKN+G VGD
Sbjct: 64  LYDDTCPFHRNAWNCIRNQRQNLSLINSWKWVPRGCDMNRIDPFRFLGSMRNKNVGIVGD 123

Query: 125 SLNENFIVSFLCVLRAADSGAKKWKRKGAWRGGYFPKYNVTVAYHRAVLLANYR 178
           SLNEN +VSFLC LR AD GA+KWK+KGAWRG YFPK+NVTVAYHRAVLL+ Y+
Sbjct: 124 SLNENLLVSFLCTLRVADGGARKWKKKGAWRGAYFPKFNVTVAYHRAVLLSKYK 177

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438268|ref|XP_004136911.1| PREDICTED: uncharacterized protein LOC101208378 [Cucumis sativus] gi|449478812|ref|XP_004155424.1| PREDICTED: uncharacterized LOC101208378 [Cucumis sativus]

 Score =  219 bits (559), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 104/156 (66%), Positives = 119/156 (76%), Gaps = 3/156 (1%)

Query: 23  LLLFLYSSLLSPPTAKTLSFHSTPCNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRN 82
           L + LY+ +   P  K +S  S  CNLF G W       H+P+Y+ETCPF RNAWNCLRN
Sbjct: 26  LTVSLYAPISPSPKIKKIS-ASPSCNLFKGHW--NRDPNHRPIYDETCPFHRNAWNCLRN 82

Query: 83  QRPNMVLINSYKWVPEACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAAD 142
           QR NM  INS+KWVP+ CDLPQIDP +FL LMRN+NIGFVGDSLNENF+ SFLC LR AD
Sbjct: 83  QRDNMGTINSWKWVPQTCDLPQIDPFRFLDLMRNRNIGFVGDSLNENFLTSFLCTLRVAD 142

Query: 143 SGAKKWKRKGAWRGGYFPKYNVTVAYHRAVLLANYR 178
            GAKKWKRKGAW+G YFP +NVTV YHRAVLLA Y+
Sbjct: 143 LGAKKWKRKGAWKGAYFPVFNVTVGYHRAVLLAKYK 178

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507276|gb|AFK41704.1| unknown [Medicago truncatula]

 Score =  218 bits (554), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 106/174 (60%), Positives = 130/174 (74%), Gaps = 7/174 (4%)

Query: 10  PSSLFPYLILLSILLLFLYSSLLSPPTAKTLSFHSTP-----CNLFLGKWVLQHPSTHKP 64
           PS LFP+LI+L++  L+ +SS +S  T  + S  S       CNLF G WV      H P
Sbjct: 6   PSHLFPFLIILTLASLYYFSSFISLNTLSSSSSTSPSLTISTCNLFKGTWVFD--PNHTP 63

Query: 65  LYNETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQIDPVKFLSLMRNKNIGFVGD 124
           LY++TCPF RNAWNC+RN+R N+ LINS+KWVP  CD+ +IDP +FL  MRNKN+G VGD
Sbjct: 64  LYDDTCPFHRNAWNCIRNRRQNLSLINSWKWVPRGCDMNRIDPFRFLGSMRNKNVGIVGD 123

Query: 125 SLNENFIVSFLCVLRAADSGAKKWKRKGAWRGGYFPKYNVTVAYHRAVLLANYR 178
           SLNEN +VSFLC LR AD GA+KWK+KGAWRG YFPK+NVTVAYHRAVLL+ Y+
Sbjct: 124 SLNENLLVSFLCTLRVADGGARKWKKKGAWRGAYFPKFNVTVAYHRAVLLSKYK 177

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496248|ref|XP_002264519.2| PREDICTED: uncharacterized protein LOC100254288 [Vitis vinifera]

 Score =  215 bits (548), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 101/145 (69%), Positives = 118/145 (81%), Gaps = 4/145 (2%)

Query: 36  TAKTLSFHSTP--CNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPNMVLINSY 93
           T  T +F  +P  CNLF G WV + PS H+P+Y+ETCPF RNAWNCL+N+R NM  INS+
Sbjct: 44  TPSTPAFSPSPPQCNLFHGNWV-EDPS-HEPIYDETCPFHRNAWNCLKNKRDNMGRINSW 101

Query: 94  KWVPEACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSGAKKWKRKGA 153
           +WVP  CD P+IDPV FL LMRN+ IGFVGDSLNENF+ SFLC+LR AD+GAK+WKRKGA
Sbjct: 102 RWVPSGCDFPRIDPVGFLGLMRNRRIGFVGDSLNENFLASFLCILRVADAGAKRWKRKGA 161

Query: 154 WRGGYFPKYNVTVAYHRAVLLANYR 178
           WRG YFPK+NVTVAYHRAVLLA Y 
Sbjct: 162 WRGAYFPKFNVTVAYHRAVLLAKYE 186

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088667|emb|CBI38035.3| unnamed protein product [Vitis vinifera]

 Score =  215 bits (548), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 101/145 (69%), Positives = 118/145 (81%), Gaps = 4/145 (2%)

Query: 36  TAKTLSFHSTP--CNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPNMVLINSY 93
           T  T +F  +P  CNLF G WV + PS H+P+Y+ETCPF RNAWNCL+N+R NM  INS+
Sbjct: 45  TPSTPAFSPSPPQCNLFHGNWV-EDPS-HEPIYDETCPFHRNAWNCLKNKRDNMGRINSW 102

Query: 94  KWVPEACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSGAKKWKRKGA 153
           +WVP  CD P+IDPV FL LMRN+ IGFVGDSLNENF+ SFLC+LR AD+GAK+WKRKGA
Sbjct: 103 RWVPSGCDFPRIDPVGFLGLMRNRRIGFVGDSLNENFLASFLCILRVADAGAKRWKRKGA 162

Query: 154 WRGGYFPKYNVTVAYHRAVLLANYR 178
           WRG YFPK+NVTVAYHRAVLLA Y 
Sbjct: 163 WRGAYFPKFNVTVAYHRAVLLAKYE 187

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147775551|emb|CAN59848.1| hypothetical protein VITISV_026675 [Vitis vinifera]

 Score =  214 bits (546), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 101/145 (69%), Positives = 118/145 (81%), Gaps = 4/145 (2%)

Query: 36  TAKTLSFHSTP--CNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPNMVLINSY 93
           T  T +F  +P  CNLF G WV + PS H+P+Y+ETCPF RNAWNCL+N+R NM  INS+
Sbjct: 44  TPSTPAFSPSPPQCNLFHGNWV-EDPS-HEPIYDETCPFHRNAWNCLKNKRDNMGRINSW 101

Query: 94  KWVPEACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSGAKKWKRKGA 153
           +WVP  CD P+IDPV FL LMRN+ IGFVGDSLNENF+ SFLC+LR AD+GAK+WKRKGA
Sbjct: 102 RWVPSGCDFPRIDPVGFLGLMRNRRIGFVGDSLNENFLASFLCILRVADAGAKRWKRKGA 161

Query: 154 WRGGYFPKYNVTVAYHRAVLLANYR 178
           WRG YFPK+NVTVAYHRAVLLA Y 
Sbjct: 162 WRGAYFPKFNVTVAYHRAVLLAKYE 186

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297794037|ref|XP_002864903.1| hypothetical protein ARALYDRAFT_332664 [Arabidopsis lyrata subsp. lyrata] gi|297310738|gb|EFH41162.1| hypothetical protein ARALYDRAFT_332664 [Arabidopsis lyrata subsp. lyrata]

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 100/152 (65%), Positives = 120/152 (78%), Gaps = 11/152 (7%)

Query: 27  LYSSLLSPPTAKTLSFHSTPCNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPN 86
           + S+L+SPP          PC+LF GKWV  +P T KPLY+ETCPF RNAWNCLRN+R N
Sbjct: 45  ITSNLVSPP----------PCDLFSGKWVF-NPETPKPLYDETCPFHRNAWNCLRNKRDN 93

Query: 87  MVLINSYKWVPEACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSGAK 146
           M +INS++W+P  C L +IDP +FL +MRNKN+GFVGDSLNENF+VSFLC+LR AD  A 
Sbjct: 94  MDVINSWRWIPNGCGLSRIDPARFLGMMRNKNVGFVGDSLNENFLVSFLCILRLADPSAV 153

Query: 147 KWKRKGAWRGGYFPKYNVTVAYHRAVLLANYR 178
           KWK+K AWRG YFPK+NVTVAYHRAVLLA Y+
Sbjct: 154 KWKKKKAWRGAYFPKFNVTVAYHRAVLLAKYQ 185

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334188623|ref|NP_001190614.1| uncharacterized protein [Arabidopsis thaliana] gi|332010522|gb|AED97905.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 98/152 (64%), Positives = 118/152 (77%), Gaps = 11/152 (7%)

Query: 27  LYSSLLSPPTAKTLSFHSTPCNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPN 86
           + S++ SPP          PC+LF G+WV  +P T KPLY+ETCPF RNAWNCLRN+R N
Sbjct: 45  ITSNIASPP----------PCDLFSGRWVF-NPETPKPLYDETCPFHRNAWNCLRNKRDN 93

Query: 87  MVLINSYKWVPEACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSGAK 146
           M +INS++W P  C L +IDP +FL +MRNKN+GFVGDSLNENF+VSFLC+LR AD  A 
Sbjct: 94  MDVINSWRWEPNGCGLSRIDPTRFLGMMRNKNVGFVGDSLNENFLVSFLCILRVADPSAI 153

Query: 147 KWKRKGAWRGGYFPKYNVTVAYHRAVLLANYR 178
           KWK+K AWRG YFPK+NVTVAYHRAVLLA Y+
Sbjct: 154 KWKKKKAWRGAYFPKFNVTVAYHRAVLLAKYQ 185

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|16226907|gb|AAL16295.1|AF428365_1 AT5g64470/T12B11_6 [Arabidopsis thaliana]

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 98/152 (64%), Positives = 118/152 (77%), Gaps = 11/152 (7%)

Query: 27  LYSSLLSPPTAKTLSFHSTPCNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPN 86
           + S++ SPP          PC+LF G+WV  +P T KPLY+ETCPF RNAWNCLRN+R N
Sbjct: 45  ITSNIASPP----------PCDLFSGRWVF-NPETPKPLYDETCPFHRNAWNCLRNKRDN 93

Query: 87  MVLINSYKWVPEACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSGAK 146
           M +INS++W P  C L +IDP +FL +MRNKN+GFVGDSLNENF+VSFLC+LR AD  A 
Sbjct: 94  MDVINSWRWEPNGCGLSRIDPTRFLGMMRNKNVGFVGDSLNENFLVSFLCILRVADPSAI 153

Query: 147 KWKRKGAWRGGYFPKYNVTVAYHRAVLLANYR 178
           KWK+K AWRG YFPK+NVTVAYHRAVLLA Y+
Sbjct: 154 KWKKKKAWRGAYFPKFNVTVAYHRAVLLAKYQ 185

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
TAIR|locus:2179386	407	TBL12 "AT5G64470" [Arabidopsis	0.741	0.324	0.639	1.3e-45
TAIR|locus:2055200	412	TBL13 "AT2G14530" [Arabidopsis	0.775	0.334	0.402	1.4e-25
TAIR|locus:2035342	456	TBL25 "AT1G01430" [Arabidopsis	0.674	0.263	0.357	2.2e-18
TAIR|locus:2136113	432	TBL23 "AT4G11090" [Arabidopsis	0.657	0.270	0.379	5.1e-17
TAIR|locus:2149947	485	TBL5 "AT5G20590" [Arabidopsis	0.505	0.185	0.404	4.9e-16
TAIR|locus:2128489	430	TBL24 "AT4G23790" [Arabidopsis	0.657	0.272	0.354	6.4e-16
TAIR|locus:2146062	526	TBL21 "AT5G15890" [Arabidopsis	0.494	0.167	0.430	1.3e-15
TAIR|locus:2125048	442	TBL26 "AT4G01080" [Arabidopsis	0.674	0.271	0.333	4e-15
TAIR|locus:2076909	373	TBL20 "AT3G02440" [Arabidopsis	0.657	0.313	0.311	4e-15
TAIR|locus:2080280	379	TBL36 "AT3G54260" [Arabidopsis	0.505	0.237	0.393	4.2e-15

TAIR|locus:2179386 TBL12 "AT5G64470" [Arabidopsis thaliana (taxid:3702)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 85/133 (63%), Positives = 101/133 (75%)

Query:    46 PCNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQI 105
             PC+LF G+WV  +P T KPLY+ETCPF RNAWNCLRN+R NM +INS++W P  C L +I
Sbjct:    54 PCDLFSGRWVF-NPETPKPLYDETCPFHRNAWNCLRNKRDNMDVINSWRWEPNGCGLSRI 112

Query:   106 DPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSXXXXXXXXXXXXXXYFPKYNVT 165
             DP +FL +MRNKN+GFVGDSLNENF+VSFLC+LR AD               YFPK+NVT
Sbjct:   113 DPTRFLGMMRNKNVGFVGDSLNENFLVSFLCILRVADPSAIKWKKKKAWRGAYFPKFNVT 172

Query:   166 VAYHRAVLLANYR 178
             VAYHRAVLLA Y+
Sbjct:   173 VAYHRAVLLAKYQ 185

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2055200 TBL13 "AT2G14530" [Arabidopsis thaliana (taxid:3702)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 56/139 (40%), Positives = 75/139 (53%)

Query:    39 TLSFHSTPCNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPNMVLINSYKWVPE 98
             +LS  S  C+   G W+   P+     Y  +C      WNC+RN + N   I++++W P+
Sbjct:    54 SLSPLSATCDFSEGSWIYD-PNPRSTRYTSSCKEIFKGWNCIRNNKTNGFEISNWRWKPK 112

Query:    99 ACDLPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSXXXXXXXXXXXXXXY 158
              CDLP  DP+KFL   RN NIGFVGDSLN N  VS  C+L++                  
Sbjct:   113 HCDLPSFDPLKFLQSHRNTNIGFVGDSLNRNMFVSLFCMLKSVTGELKKWRPAGADRGFT 172

Query:   159 FPKYNVTVAYHRAVLLANY 177
             F +YN+T+AYHR  LLA Y
Sbjct:   173 FSQYNLTIAYHRTNLLARY 191

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2035342 TBL25 "AT1G01430" [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 45/126 (35%), Positives = 71/126 (56%)

Query:    44 STPCNLFLGKWVLQHPSTHKPLY-NETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDL 102
             ST C++F+G WV   P    P+Y N +C   ++  NCL+N RP++  +  ++W P  CDL
Sbjct:    96 STKCDIFIGNWV---PDPSGPIYTNVSCRHIQDYQNCLKNGRPDVNYLR-WRWQPRDCDL 151

Query:   103 PQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSXXXXXXXXXXXXXXY-FPK 161
             P+ +P +FL  MRNK + F+GDS++ N + S LC+L   +               + FP 
Sbjct:   152 PRFNPEQFLDNMRNKWLAFIGDSISRNHVQSLLCILSQVEEVEDIFHDKEYKSRIWRFPS 211

Query:   162 YNVTVA 167
             YN T++
Sbjct:   212 YNFTLS 217

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2136113 TBL23 "AT4G11090" [Arabidopsis thaliana (taxid:3702)]

 Score = 215 (80.7 bits), Expect = 5.1e-17, P = 5.1e-17
 Identities = 47/124 (37%), Positives = 68/124 (54%)

Query:    47 CNLFLGKWVLQHPSTHKPLY-NETCPFQRNAW-NCLRNQRPNMVLINSYKWVPEACDLPQ 104
             C+LF GKW+ + P    P+Y NE+C    +A  NC+ N RP+   +N +KW P  C LP+
Sbjct:    79 CDLFTGKWI-KDPLG--PIYTNESCGIVVDAHQNCITNGRPDSGFLN-WKWKPNDCSLPR 134

Query:   105 IDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSXXXXXXXXXXXXXXY-FPKYN 163
              D ++FL LMRNK+   +GDS+  N + S LC+L   +               + FP YN
Sbjct:   135 FDSLRFLQLMRNKSWAIIGDSIARNHVESLLCMLSTVEKPVEVYHDENYRSKRWHFPSYN 194

Query:   164 VTVA 167
              TV+
Sbjct:   195 FTVS 198

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2149947 TBL5 "AT5G20590" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
 Identities = 38/94 (40%), Positives = 56/94 (59%)

Query:    47 CNLFLGKWVLQHPSTHKPLYNE-TCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQI 105
             C+L+ G WV        PLY   +CP+  +A++C RN R +   +N ++W P+ CDLP+ 
Sbjct:   141 CDLYKGSWV--KGDDEYPLYQPGSCPYVDDAFDCQRNGRRDSDYLN-WRWKPDGCDLPRF 197

Query:   106 DPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLR 139
             +   FL  +R K++  VGDS+N N   S LCVLR
Sbjct:   198 NATDFLVKLRGKSLMLVGDSMNRNQFESMLCVLR 231

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2128489 TBL24 "AT4G23790" [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 6.4e-16, P = 6.4e-16
 Identities = 44/124 (35%), Positives = 70/124 (56%)

Query:    47 CNLFLGKWVLQHPSTHKPLY-NETCPFQRNAW-NCLRNQRPNMVLINSYKWVPEACDLPQ 104
             C+LF GKW+   P +  P+Y N++C    +   NC+ N RP++  +  +KW P  C LP+
Sbjct:    79 CDLFAGKWI---PDSVGPIYTNKSCGSLIDGHQNCITNGRPDLDFLY-WKWKPHDCLLPR 134

Query:   105 IDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSXXXXXXXXXXXXXXY-FPKYN 163
              DP +FL LMR+K+  F+GDS++ N + S LC+L   +               + FP +N
Sbjct:   135 FDPRRFLQLMRHKSWAFIGDSISRNHVESLLCMLSTIEEPVEVYHDMEYKSKRWHFPLHN 194

Query:   164 VTVA 167
             +TV+
Sbjct:   195 LTVS 198

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2146062 TBL21 "AT5G15890" [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 40/93 (43%), Positives = 58/93 (62%)

Query:    47 CNLFLGKWVLQHPSTHKPLY-NETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQI 105
             C+LF G+WV   P+   P Y N TC       NC++  RP+   +  ++W PE+CDLP  
Sbjct:   187 CDLFTGEWV---PNEEAPYYTNTTCWAIHEHQNCMKYGRPDTGFMR-WRWKPESCDLPIF 242

Query:   106 DPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVL 138
             DP +FL ++R K +GFVGDS++ N + S LC+L
Sbjct:   243 DPQEFLEMVRGKAMGFVGDSISRNQVQSLLCLL 275

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2125048 TBL26 "AT4G01080" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 4.0e-15, P = 4.0e-15
 Identities = 42/126 (33%), Positives = 66/126 (52%)

Query:    44 STPCNLFLGKWVLQHPSTHKPLY-NETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDL 102
             S  C+LF G W+   P    PLY N TC   ++  NCL N RP++  +  ++W P  CDL
Sbjct:    88 SAKCDLFTGDWI---PDPTGPLYTNVTCRHIQDFQNCLLNGRPDVNYL-FWRWKPRDCDL 143

Query:   103 PQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSXXXXXXXXXXXXXXY-FPK 161
             P+  P +FL+ ++NK   F+GDS+  N + S +C+L   +               + FP 
Sbjct:   144 PRFSPSQFLASVKNKWWAFIGDSIARNHVQSLICILSQVEEVEEIYHDKEFRSKIWRFPS 203

Query:   162 YNVTVA 167
             +N T++
Sbjct:   204 HNFTLS 209

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076909 TBL20 "AT3G02440" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 4.0e-15, P = 4.0e-15
 Identities = 38/122 (31%), Positives = 63/122 (51%)

Query:    47 CNLFLGKWVLQHPSTHKPLY-NETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQI 105
             C++F G+W+   P+   P Y N TC       NC++  RP++  +  ++W P+ CDLP  
Sbjct:   127 CDIFSGEWI---PNPKAPYYTNTTCRAIHEHQNCIKYGRPDLGFMK-WRWKPKECDLPLF 182

Query:   106 DPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADSXXXXXXXXXXXXXXYFPKYNVT 165
             DP +FL ++R   + FVGDS++ N + S +C+L   +                +  YN T
Sbjct:   183 DPYEFLEIVRGTRMAFVGDSVSRNHVQSLICLLSRVEHPEGDSQQEFNFQRWKYKTYNFT 242

Query:   166 VA 167
             +A
Sbjct:   243 IA 244

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 37/94 (39%), Positives = 58/94 (61%)

Query:    47 CNLFLGKWVLQHPSTHKPLYNETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQID 106
             C+  +GKW      T+ PLY+ +CP+  +A +C RN RP+      ++W+P+AC LP+ D
Sbjct:    51 CDYSVGKWTFDE--TY-PLYDSSCPYLSSALSCQRNGRPDSYY-QKWRWIPKACSLPRFD 106

Query:   107 PVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRA 140
              +KFL  MR K I  VGDS+  N   S +C++++
Sbjct:   107 ALKFLGKMRGKRIMLVGDSMMRNQWESLVCLVQS 140

GO:0008150 "biological_process" evidence=ND

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_I002734 hypothetical protein (392 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	178
pfam14416	55	pfam14416, PMR5N, PMR5 N terminal Domain	2e-14
PLN02629	387	PLN02629, PLN02629, powdery mildew resistance 5	6e-14
pfam13839	270	pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera	3e-13

>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain

 Score = 64.2 bits (157), Expect = 2e-14
 Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 5/59 (8%)

Query: 44  STPCNLFLGKWVLQHPSTHKPLY-NETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACD 101
           S  C+LF GKWV        PLY N +CPF    +NC +N RP+   +  ++W P  CD
Sbjct: 1   SEECDLFKGKWV---FDPSYPLYTNSSCPFIDPGFNCQKNGRPDSDYLK-WRWQPHGCD 55

The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich predicted sugar binding domain followed by the PC-Esterase (acyl esterase) domain. Length = 55

>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5

 Score = 68.4 bits (167), Expect = 6e-14
 Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 7/133 (5%)

Query: 47  CNLFLGKWVLQHPSTHKPLYNET-CPFQRNA-WNCLRNQRPNMVLINSYKWVPEACDLPQ 104
           C LF+G WV        PLY  + CP   +  +NC    RP+   +  Y+W P  C+LP+
Sbjct: 53  CALFVGTWVRDDSY---PLYQSSDCPGVIDPEFNCQMYGRPDSDYLK-YRWQPLNCELPR 108

Query: 105 IDPVKFLSLMRNKNIGFVGDSLNENFIVSFLC-VLRAADSGAKKWKRKGAWRGGYFPKYN 163
            + ++FL  M+ K + FVGDSL  N   S +C +  +  S   +  R        F  Y 
Sbjct: 109 FNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYG 168

Query: 164 VTVAYHRAVLLAN 176
           V++++++A  L +
Sbjct: 169 VSISFYKAPYLVD 181

Length = 387

>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p

 Score = 65.5 bits (160), Expect = 3e-13
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)

Query: 102 LPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLR-AADSGAKKWKRKGAWRGGYFP 160
           LP+ D  +FL  +R K + FVGDSL+ N   S +C+L        K  +R G      F 
Sbjct: 1   LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLERDGRLFRFRFK 60

Query: 161 KYNVTVAYHRAVLL 174
            YNVT+ ++ +  L
Sbjct: 61  DYNVTIEFYWSPFL 74

The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	178
PLN02629	387	powdery mildew resistance 5	100.0
PF14416	55	PMR5N: PMR5 N terminal Domain	99.93
PF13839	263	PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f	99.72
cd01842	183	SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG	88.71
COG2845	354	Uncharacterized protein conserved in bacteria [Fun	85.72
cd01829	200	SGNH_hydrolase_peri2 SGNH_peri2; putative periplas	84.77
cd01834	191	SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG	84.39
cd01841	174	NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa	82.73

>PLN02629 powdery mildew resistance 5

Probab=100.00  E-value=2.6e-54  Score=388.22  Aligned_cols=133  Identities=30%  Similarity=0.671  Sum_probs=121.8

Q ss_pred             CCCCCCCccccCceeecCCCCCCCCCC-CCCc-CcccccccccCCCCCcccceeeeeeCCCCCCCCCChHHHHHHhcCCc
Q 030408           41 SFHSTPCNLFLGKWVLQHPSTHKPLYN-ETCP-FQRNAWNCLRNQRPNMVLINSYKWVPEACDLPQIDPVKFLSLMRNKN  118 (178)
Q Consensus        41 ~~~~~~Cd~~~G~WV~d~~~~~~P~Y~-~tCp-~i~~~~~C~~nGRpD~~~~~~wrWqP~gC~lp~fd~~~fl~~lrgk~  118 (178)
                      ..+.++||+|+|+||+|   .++|+|+ .+|| ||+++|||++|||||++|+ +|||||+||+|||||+.+||+.|||||
T Consensus        47 ~~~~~~CD~f~G~WV~D---~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl-~WRWqP~gC~LPRFda~~fLe~~RgKr  122 (387)
T PLN02629         47 QANQSTCALFVGTWVRD---DSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYL-KYRWQPLNCELPRFNGLEFLLKMKGKT  122 (387)
T ss_pred             CCCccccCCCCCeEecC---CCCCCCCCCCCccccccccchhhcCCCCcchh-hccccCCCCCCCCcCHHHHHHHhcCCe
Confidence            35678899999999999   4789998 5999 9999999999999999999 699999999999999999999999999


Q ss_pred             EEEEecchhhHHHHHHHHhhhhcccCCc-eeeecCceeeEEEeeccEEEEEEecccceec
Q 030408          119 IGFVGDSLNENFIVSFLCVLRAADSGAK-KWKRKGAWRGGYFPKYNVTVAYHRAVLLANY  177 (178)
Q Consensus       119 i~FVGDSl~Rn~~~SL~clL~~~~~~~~-~~~~~~~~~~~~f~~yn~tv~f~WsPfLv~~  177 (178)
                      ||||||||+||||+||+|||++++|... .+.+++..+.|+|++||+||+||||||||+.
T Consensus       123 l~FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~  182 (387)
T PLN02629        123 VMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDI  182 (387)
T ss_pred             EEEeccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEee
Confidence            9999999999999999999999887543 3445566788999999999999999999985

>PF14416 PMR5N: PMR5 N terminal Domain

Probab=99.93  E-value=1.5e-26  Score=157.73  Aligned_cols=54  Identities=39%  Similarity=1.032  Sum_probs=49.7

Q ss_pred             CCCCccccCceeecCCCCCCCCCC-CCCcCcccccccccCCCCCcccceeeeeeCCCCC
Q 030408           44 STPCNLFLGKWVLQHPSTHKPLYN-ETCPFQRNAWNCLRNQRPNMVLINSYKWVPEACD  101 (178)
Q Consensus        44 ~~~Cd~~~G~WV~d~~~~~~P~Y~-~tCp~i~~~~~C~~nGRpD~~~~~~wrWqP~gC~  101 (178)
                      +++||+|+|+||+|   .++|+|+ ++||||+++|||++|||||++|+ +|||||++|+
T Consensus         1 e~~Cd~~~G~WV~D---~~~PlY~~~~Cp~i~~~~nC~~nGRpD~~y~-~wRWqP~~Cd   55 (55)
T PF14416_consen    1 EKRCDYFDGRWVPD---PSYPLYTNSTCPFIDEGFNCQKNGRPDSDYL-KWRWQPRGCD   55 (55)
T ss_pred             CCccCcccCEEEeC---CCCCccCCCCCCcCCCccchhhcCCCCCccc-eeeecCCCCC
Confidence            36799999999999   4679996 69999999999999999999998 5999999996

>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p

Probab=99.72  E-value=1.1e-17  Score=137.67  Aligned_cols=75  Identities=29%  Similarity=0.403  Sum_probs=61.8

Q ss_pred             CCCCChHHHHHHhcCCcEEEEecchhhHHHHHHHHhhhhccc-----CCce-eeecCceeeEEEeeccEEEEEEecccce
Q 030408          102 LPQIDPVKFLSLMRNKNIGFVGDSLNENFIVSFLCVLRAADS-----GAKK-WKRKGAWRGGYFPKYNVTVAYHRAVLLA  175 (178)
Q Consensus       102 lp~fd~~~fl~~lrgk~i~FVGDSl~Rn~~~SL~clL~~~~~-----~~~~-~~~~~~~~~~~f~~yn~tv~f~WsPfLv  175 (178)
                      +++||+.++|++||||+|+|||||++||+|+||+|+|.+..+     .... ....+....+.+.++|+||+|+|+|||+
T Consensus         1 ~~~~d~~~cL~~lr~k~i~fiGDS~~Rq~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~p~l~   80 (263)
T PF13839_consen    1 LPRFDARECLQRLRNKRIVFIGDSTTRQQYESLVCLLGPEVPSWQESPHSGIEFPNHRNFRYNFPDYNVTLSFYWDPFLV   80 (263)
T ss_pred             CChhhHHHHHHHccCCEEEEEechhhHHHHHHHHHHHhccccccccccccccccccCCceEEeecCCCeEEEEecccccc
Confidence            578999999999999999999999999999999999998665     2111 1112334567889999999999999998


Q ss_pred             e
Q 030408          176 N  176 (178)
Q Consensus       176 ~  176 (178)
                      +
T Consensus        81 ~   81 (263)
T PF13839_consen   81 D   81 (263)
T ss_pred             c
Confidence            4

>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily

Probab=88.71  E-value=0.34  Score=40.56  Aligned_cols=23  Identities=17%  Similarity=0.390  Sum_probs=21.4

Q ss_pred             EEEEecchhhHHHHHHHHhhhhc
Q 030408          119 IGFVGDSLNENFIVSFLCVLRAA  141 (178)
Q Consensus       119 i~FVGDSl~Rn~~~SL~clL~~~  141 (178)
                      ++|+|||+.|.+|--|+|+|...
T Consensus         2 v~~lgds~~ravykdlv~l~q~~   24 (183)
T cd01842           2 VVILGDSIQRAVYKDLVLLLQKD   24 (183)
T ss_pred             EEEEccHHHHHHHHHHHHHhcCC
Confidence            78999999999999999999854

SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.

>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=85.72  E-value=0.88  Score=41.46  Aligned_cols=30  Identities=20%  Similarity=0.162  Sum_probs=24.8

Q ss_pred             HHHhcCCcEEEEecchhhHHHHHHHHhhhh
Q 030408          111 LSLMRNKNIGFVGDSLNENFIVSFLCVLRA  140 (178)
Q Consensus       111 l~~lrgk~i~FVGDSl~Rn~~~SL~clL~~  140 (178)
                      .+.=.+++|.|||||+++.+-..|...|..
T Consensus       111 ~k~~~a~kvLvvGDslm~gla~gl~~al~t  140 (354)
T COG2845         111 AKSRDADKVLVVGDSLMQGLAEGLDKALAT  140 (354)
T ss_pred             hhCCCCCEEEEechHHhhhhHHHHHHHhcc
Confidence            344458999999999999999998887764

>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases

Probab=84.77  E-value=0.83  Score=35.95  Aligned_cols=22  Identities=27%  Similarity=0.434  Sum_probs=18.2

Q ss_pred             cEEEEecchhhHHHHHHHHhhh
Q 030408          118 NIGFVGDSLNENFIVSFLCVLR  139 (178)
Q Consensus       118 ~i~FVGDSl~Rn~~~SL~clL~  139 (178)
                      ||+|+|||++.+...++...+.
T Consensus         1 ril~iGDS~~~g~~~~l~~~~~   22 (200)
T cd01829           1 RVLVIGDSLAQGLAPGLLRALA   22 (200)
T ss_pred             CEEEEechHHHHHHHHHHHHhc
Confidence            6899999999998877775554

The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.

>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily

Probab=84.39  E-value=0.51  Score=36.31  Aligned_cols=15  Identities=27%  Similarity=0.536  Sum_probs=13.9

Q ss_pred             CCcEEEEecchhhHH
Q 030408          116 NKNIGFVGDSLNENF  130 (178)
Q Consensus       116 gk~i~FVGDSl~Rn~  130 (178)
                      |++|+++|||++.+.
T Consensus         1 ~~~v~~~GDSit~g~   15 (191)
T cd01834           1 GDRIVFIGNSITDRG   15 (191)
T ss_pred             CCEEEEeCCChhhcc
Confidence            799999999999976

SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.

>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases

Probab=82.73  E-value=0.63  Score=35.93  Aligned_cols=17  Identities=53%  Similarity=0.728  Sum_probs=13.5

Q ss_pred             CcEEEEecchhhHHHHH
Q 030408          117 KNIGFVGDSLNENFIVS  133 (178)
Q Consensus       117 k~i~FVGDSl~Rn~~~S  133 (178)
                      |+|+|+|||++.+.-..
T Consensus         1 ~~iv~~GdS~t~~~~~~   17 (174)
T cd01841           1 KNIVFIGDSLFEGWPLY   17 (174)
T ss_pred             CCEEEEcchhhhcCchh
Confidence            68999999999865433

The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	178
4hf7_A	209	Putative acylhydrolase; PF13472 family, structural	88.12
3hp4_A	185	GDSL-esterase; psychrotrophic, monoethylphosphonat	85.27
4h08_A	200	Putative hydrolase; GDSL-like lipase/acylhydrolase	82.6
3rjt_A	216	Lipolytic protein G-D-S-L family; PSI-biology, mid	82.16

>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=88.12  E-value=0.17  Score=39.18  Aligned_cols=15  Identities=27%  Similarity=0.716  Sum_probs=13.2

Q ss_pred             cCCcEEEEecchhhH
Q 030408          115 RNKNIGFVGDSLNEN  129 (178)
Q Consensus       115 rgk~i~FVGDSl~Rn  129 (178)
                      .+++|+|+|||+++.
T Consensus        25 ~~~~Iv~~GDSit~g   39 (209)
T 4hf7_A           25 KEKRVVFMGNXITEG   39 (209)
T ss_dssp             GGCCEEEEESHHHHH
T ss_pred             CCCeEEEECcHHHhC
Confidence            478999999999985

>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0

Probab=85.27  E-value=0.25  Score=36.56  Aligned_cols=14  Identities=29%  Similarity=0.534  Sum_probs=12.7

Q ss_pred             CCcEEEEecchhhH
Q 030408          116 NKNIGFVGDSLNEN  129 (178)
Q Consensus       116 gk~i~FVGDSl~Rn  129 (178)
                      |++|+|+|||++.+
T Consensus         2 ~~~i~~~GDSit~G   15 (185)
T 3hp4_A            2 DNTILILGDXLSAA   15 (185)
T ss_dssp             CEEEEEEECTTTTT
T ss_pred             CCeEEEECCccccc
Confidence            78999999999974

>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}

Probab=82.60  E-value=0.77  Score=34.64  Aligned_cols=22  Identities=14%  Similarity=0.394  Sum_probs=16.8

Q ss_pred             cEEEEecchhhHHHHHHHHhhh
Q 030408          118 NIGFVGDSLNENFIVSFLCVLR  139 (178)
Q Consensus       118 ~i~FVGDSl~Rn~~~SL~clL~  139 (178)
                      ||+|+|||++..-...|...|.
T Consensus        22 rVl~iGDSit~G~~~~l~~~l~   43 (200)
T 4h08_A           22 HVLLIGNSITRGYYGKVEAALK   43 (200)
T ss_dssp             EEEEEESHHHHHHHHHHHHHTT
T ss_pred             eEEEEchhHHhhhHHHHHHHhc
Confidence            5999999999885555555554

>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=82.16  E-value=0.49  Score=35.31  Aligned_cols=15  Identities=27%  Similarity=0.503  Sum_probs=13.2

Q ss_pred             cCCcEEEEecchhhH
Q 030408          115 RNKNIGFVGDSLNEN  129 (178)
Q Consensus       115 rgk~i~FVGDSl~Rn  129 (178)
                      .+++|+|+|||++.+
T Consensus         7 ~~~~i~~~GDSit~g   21 (216)
T 3rjt_A            7 PGSKLVMVGDSITDC   21 (216)
T ss_dssp             TTCEEEEEESHHHHT
T ss_pred             CCCEEEEEecccccc
Confidence            478999999999965

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	178
d3bzwa1	248	Uncharacterized protein BT2961 {Bacteroides thetai	93.04
d3dc7a1	207	Uncharacterized protein Lp3323 {Lactobacillus plan	91.42
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	90.88
d1otha2	170	Ornithine transcarbamoylase {Human (Homo sapiens)	89.25
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	84.76
d1vlva2	161	Ornithine transcarbamoylase {Thermotoga maritima [	84.3
d1dxha2	185	Ornithine transcarbamoylase {Pseudomonas aeruginos	84.25
d1vjga_	201	Hypothetical protein alr1529 {Nostoc sp. pcc 7120	83.61
d1pg5a2	153	Aspartate carbamoyltransferase catalytic subunit {	83.18
d2at2a2	151	Aspartate carbamoyltransferase catalytic subunit {	82.16
d1yzfa1	195	Lipase/acylhydrolase {Enterococcus faecalis [TaxId	80.36

>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein BT2961
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=93.04  E-value=0.016  Score=40.92  Aligned_cols=15  Identities=33%  Similarity=0.942  Sum_probs=13.0

Q ss_pred             cCCcEEEEecchhhH
Q 030408          115 RNKNIGFVGDSLNEN  129 (178)
Q Consensus       115 rgk~i~FVGDSl~Rn  129 (178)
                      .||||+|+|||++-+
T Consensus         7 ~~kkI~~~GDS~T~g   21 (248)
T d3bzwa1           7 QGKKVGYIGDSITDP   21 (248)
T ss_dssp             TTCEEEEEESTTTCT
T ss_pred             CCCEEEEEehHHccC
Confidence            699999999998753

>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein Lp3323
species: Lactobacillus plantarum [TaxId: 1590]

Probab=91.42  E-value=0.032  Score=40.03  Aligned_cols=23  Identities=22%  Similarity=0.333  Sum_probs=16.7

Q ss_pred             hcCCcEEEEecchhh------HHHHHHHH
Q 030408          114 MRNKNIGFVGDSLNE------NFIVSFLC  136 (178)
Q Consensus       114 lrgk~i~FVGDSl~R------n~~~SL~c  136 (178)
                      +..|||+|+|||++-      +.|.+++.
T Consensus         2 ~~~kri~~iGDSit~g~g~~~~~~~~~l~   30 (207)
T d3dc7a1           2 VSFKRPAWLGDSITANNGLATVHYHDILA   30 (207)
T ss_dssp             BCCSSEEEEESTTTSTTCSSSSCHHHHHH
T ss_pred             CCCCEEEEEehHhhcCCCCCCccHHHHHH
Confidence            457999999999973      34655544

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.88  E-value=0.053  Score=40.07  Aligned_cols=25  Identities=20%  Similarity=0.371  Sum_probs=21.9

Q ss_pred             hcCCcEEEEecchhhHHHHHHHHhhhh
Q 030408          114 MRNKNIGFVGDSLNENFIVSFLCVLRA  140 (178)
Q Consensus       114 lrgk~i~FVGDSl~Rn~~~SL~clL~~  140 (178)
                      +.|++|+||||  .+|...|++.+|..
T Consensus         2 l~gl~Ia~VGD--~~nv~~Sli~~l~~   26 (163)
T d1pvva2           2 IKGVKVVYVGD--GNNVAHSLMIAGTK   26 (163)
T ss_dssp             CTTCEEEEESC--CCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECC--CcHHHHHHHHHHHH
Confidence            57999999999  67899999988875

>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.25  E-value=0.075  Score=39.12  Aligned_cols=25  Identities=16%  Similarity=0.458  Sum_probs=21.3

Q ss_pred             hcCCcEEEEecchhhHHHHHHHHhhhh
Q 030408          114 MRNKNIGFVGDSLNENFIVSFLCVLRA  140 (178)
Q Consensus       114 lrgk~i~FVGDSl~Rn~~~SL~clL~~  140 (178)
                      +.|++|+||||  .+|...|++.++..
T Consensus         2 l~gl~I~~vGD--~~nV~~Sli~~~~~   26 (170)
T d1otha2           2 LKGLTLSWIGD--GNNILHSIMMSAAK   26 (170)
T ss_dssp             CTTCEEEEESC--SSHHHHHHHTTTGG
T ss_pred             CCCCEEEEEcC--chhHHHHHHHHHHH
Confidence            67999999999  36788999888764

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=84.76  E-value=0.16  Score=36.94  Aligned_cols=16  Identities=38%  Similarity=0.335  Sum_probs=13.7

Q ss_pred             hcCCcEEEEecchhhH
Q 030408          114 MRNKNIGFVGDSLNEN  129 (178)
Q Consensus       114 lrgk~i~FVGDSl~Rn  129 (178)
                      ++||+|+++|||++-+
T Consensus         1 ~~~~ti~~~GDS~~~g   16 (208)
T d2o14a2           1 VTNRTIYVGGDSTVCN   16 (208)
T ss_dssp             CCCCEEEEEECTTTSC
T ss_pred             CCCCEEEEEEcccccC
Confidence            4799999999998843

>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.30  E-value=0.28  Score=35.57  Aligned_cols=26  Identities=23%  Similarity=0.442  Sum_probs=21.3

Q ss_pred             hcCCcEEEEecchhhHHHHHHHHhhhh
Q 030408          114 MRNKNIGFVGDSLNENFIVSFLCVLRA  140 (178)
Q Consensus       114 lrgk~i~FVGDSl~Rn~~~SL~clL~~  140 (178)
                      |+|++|+||||-.+ |...|++.++..
T Consensus         1 l~g~ki~~vGD~~n-nV~~Sli~~~~~   26 (161)
T d1vlva2           1 LKGVKVVFMGDTRN-NVATSLMIACAK   26 (161)
T ss_dssp             STTCEEEEESCTTS-HHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCcc-HHHHHHHHHHHH
Confidence            57999999999434 699999888764

>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.25  E-value=0.26  Score=36.88  Aligned_cols=26  Identities=23%  Similarity=0.363  Sum_probs=22.4

Q ss_pred             hcCCcEEEEecchhhHHHHHHHHhhhh
Q 030408          114 MRNKNIGFVGDSLNENFIVSFLCVLRA  140 (178)
Q Consensus       114 lrgk~i~FVGDSl~Rn~~~SL~clL~~  140 (178)
                      |.|.+|+||||..+ |...|++.++..
T Consensus         3 l~~lkia~vGD~~n-nV~~Sli~~~~~   28 (185)
T d1dxha2           3 LHDISYAYLGDARN-NMGNSLLLIGAK   28 (185)
T ss_dssp             GGGCEEEEESCCSS-HHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCcc-hHHHHHHHHHHH
Confidence            67899999999767 699999988874

>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Hypothetical protein alr1529
domain: Hypothetical protein alr1529
species: Nostoc sp. pcc 7120 [TaxId: 103690]

Probab=83.61  E-value=0.16  Score=35.65  Aligned_cols=11  Identities=55%  Similarity=0.815  Sum_probs=10.1

Q ss_pred             cEEEEecchhh
Q 030408          118 NIGFVGDSLNE  128 (178)
Q Consensus       118 ~i~FVGDSl~R  128 (178)
                      ||+|||||++-
T Consensus         6 ri~~iGDS~t~   16 (201)
T d1vjga_           6 RICFVGDSFVN   16 (201)
T ss_dssp             EEEEEESHHHH
T ss_pred             EEEEEchhhcc
Confidence            89999999985

>d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]

Probab=83.18  E-value=0.35  Score=35.03  Aligned_cols=27  Identities=19%  Similarity=0.256  Sum_probs=22.9

Q ss_pred             hcCCcEEEEecchhhHHHHHHHHhhhh
Q 030408          114 MRNKNIGFVGDSLNENFIVSFLCVLRA  140 (178)
Q Consensus       114 lrgk~i~FVGDSl~Rn~~~SL~clL~~  140 (178)
                      +.|++|+||||..+-+...|++.++..
T Consensus         1 l~gl~i~~vGD~~~sRv~~Sl~~~l~~   27 (153)
T d1pg5a2           1 IDGLVFALLGDLKYARTVNSLLRILTR   27 (153)
T ss_dssp             STTCEEEEEECCSSCHHHHHHHHHGGG
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHHH
Confidence            469999999998876789999988873

>d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Bacillus subtilis [TaxId: 1423]

Probab=82.16  E-value=0.36  Score=35.22  Aligned_cols=27  Identities=19%  Similarity=0.169  Sum_probs=23.3

Q ss_pred             hcCCcEEEEecchhhHHHHHHHHhhhh
Q 030408          114 MRNKNIGFVGDSLNENFIVSFLCVLRA  140 (178)
Q Consensus       114 lrgk~i~FVGDSl~Rn~~~SL~clL~~  140 (178)
                      +.|.+|+||||...-+...||+.++..
T Consensus         1 F~gl~i~~vGD~~~srv~~Sl~~~~~~   27 (151)
T d2at2a2           1 FKGLTVSIHGDIKHSRVARSNAEVLTR   27 (151)
T ss_pred             CCCCEEEEEcCCCCCHHHHHHHHHHHH
Confidence            468999999999887899999988864

>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: TAP-like
domain: Lipase/acylhydrolase
species: Enterococcus faecalis [TaxId: 1351]

Probab=80.36  E-value=0.22  Score=35.79  Aligned_cols=12  Identities=33%  Similarity=0.642  Sum_probs=10.6

Q ss_pred             CcEEEEecchhh
Q 030408          117 KNIGFVGDSLNE  128 (178)
Q Consensus       117 k~i~FVGDSl~R  128 (178)
                      |||+|+|||++.
T Consensus         2 kri~~~GDSit~   13 (195)
T d1yzfa1           2 RKIVLFGDSITA   13 (195)
T ss_dssp             EEEEEEESHHHH
T ss_pred             CEEEEEechhhc
Confidence            689999999984