Citrus Sinensis ID: 030438

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------
Protein Sequence
MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPAEDDYSYSAI
Secondary Structure (PSIPRED)
cEEEHHHHHHHHHHHEEEccccccHHHHHHHHHHHHHHHHHHHHHHEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
Coil and Loop (DISEMBL)
MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFfypggstglrseslpwhVLFGLFVYILAVANAAIGFLEKLTFLEnsglakygseaLLVNFTAVITILYGAFVIFSvasqgpaeddysysai
Flexible Loop (DISEMBL)
MLIGLiiiggeaiMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVasqgpaeddysysai
Low Complexity Region (SEG)
MligliiiggEAIMSYKGLNLRKEVKKvihlvlhaialilgiigiYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPAEDDYSYSAI
Disordered region (IsUnstruct)
*LIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVA**************
Disordered Region (DISOPRED)
MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVA**************
Disordered Region (DISEMBL)
MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQG***********
Disordered Region (DISPRO)
MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPA*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPAEDDYSYSAI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	177	2.2.26 [Sep-21-2011]
Q8L856	239	Transmembrane ascorbate f	yes	no	1.0	0.740	0.677	3e-65
A3A9H6	234	Probable ascorbate-specif	yes	no	1.0	0.756	0.617	4e-58
C4IYS8	236	Ascorbate-specific transm	N/A	no	1.0	0.75	0.623	2e-56
Q6I681	236	Ascorbate-specific transm	N/A	no	1.0	0.75	0.612	4e-56
Q7XMK3	236	Probable ascorbate-specif	yes	no	0.841	0.631	0.666	6e-52
Q9SWS1	230	Probable transmembrane as	no	no	0.966	0.743	0.453	1e-39
Q9C540	236	Probable transmembrane as	no	no	0.813	0.610	0.424	1e-28
Q67ZF6	224	Probable transmembrane as	no	no	0.898	0.709	0.380	6e-28
Q60720	250	Cytochrome b561 OS=Mus mu	yes	no	0.954	0.676	0.355	2e-27
Q5RCZ2	251	Cytochrome b561 OS=Pongo	yes	no	0.903	0.637	0.385	3e-27

>sp|Q8L856|ACFR1_ARATH Transmembrane ascorbate ferrireductase 1 OS=Arabidopsis thaliana GN=CYB561A PE=1 SV=1

 Score =  247 bits (630), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 126/186 (67%), Positives = 147/186 (79%), Gaps = 9/186 (4%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           MLIG II+GGEAI+SYK L L K VKK+IHL+LHAIAL LGI GI AAFK HNES I NL
Sbjct: 54  MLIGFIILGGEAIISYKSLPLEKPVKKLIHLILHAIALALGIFGICAAFKNHNESHIPNL 113

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSW+GI VISLYG QW+Y F++FF+PGGST L+S  LPWH + GLFVYILAV NAA+
Sbjct: 114 YSLHSWIGIGVISLYGFQWVYSFIVFFFPGGSTNLKSGLLPWHAMLGLFVYILAVGNAAL 173

Query: 121 GFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQ---------GPAEDD 171
           GFLEKLTFLEN GL KYGSEA L+NFTA+ITIL+GAFV+ + +++              D
Sbjct: 174 GFLEKLTFLENGGLDKYGSEAFLINFTAIITILFGAFVVLTASAESPSPSPSVSNDDSVD 233

Query: 172 YSYSAI 177
           +SYSAI
Sbjct: 234 FSYSAI 239

Two-heme-containing cytochrome. Catalyzes ascorbate-dependent trans-membrane ferric-chelate reduction.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 6EC: .EC: 5EC: .EC: 1

>sp|A3A9H6|ACET1_ORYSJ Probable ascorbate-specific transmembrane electron transporter 1 OS=Oryza sativa subsp. japonica GN=Os02g0642300 PE=3 SV=1

 Score =  223 bits (569), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 110/178 (61%), Positives = 136/178 (76%), Gaps = 1/178 (0%)

Query: 1   MLIGLIIIGGEAIMSYKGL-NLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVN 59
           MLIG II+G EAIM YK L   + +  K+IHL+LHAIAL+ G +GIY AFK+HNES I N
Sbjct: 54  MLIGYIILGSEAIMVYKVLPTWKHDTTKLIHLILHAIALVFGAVGIYCAFKFHNESGIAN 113

Query: 60  LYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAA 119
           LYSLHSWLGI  I LYGIQW++GFV FF+P  S  +R   LPWH+LFGLFVYILA+A A 
Sbjct: 114 LYSLHSWLGIGTICLYGIQWIFGFVAFFFPRASPSVRKGVLPWHILFGLFVYILALATAE 173

Query: 120 IGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPAEDDYSYSAI 177
           +GFLEKLTFL++SGL KYG+EA LVNFTA+I +L+GA V+ +  S    E+ + Y+ I
Sbjct: 174 LGFLEKLTFLQSSGLDKYGAEAFLVNFTALIVVLFGASVVVAAVSPARVEEPHEYAPI 231

Two-heme-containing cytochrome. Catalyzes ascorbate-dependent trans-membrane electron transfer by utilizing a concerted H(+)/e(-) transfer mechanism.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|C4IYS8|ACFR2_MAIZE Ascorbate-specific transmembrane electron transporter 2 OS=Zea mays PE=2 SV=1

 Score =  218 bits (555), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 111/178 (62%), Positives = 135/178 (75%), Gaps = 1/178 (0%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRK-EVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVN 59
           MLIG IIIGGEAIM Y+ L     E  K+IHLVLH IAL+LG +GIY AFK HNES I N
Sbjct: 56  MLIGYIIIGGEAIMVYRVLPTSNHETNKLIHLVLHGIALVLGAVGIYFAFKNHNESGIAN 115

Query: 60  LYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAA 119
           LYSLHSW+GI  I+LYGIQW+ GFV FF+PG +  ++   LPWH+LFGLFVYILA+ANA 
Sbjct: 116 LYSLHSWIGIGTITLYGIQWIVGFVTFFFPGAAPNVKKGVLPWHILFGLFVYILALANAE 175

Query: 120 IGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPAEDDYSYSAI 177
           +GFLEKLTFLE+SGL KYG+EA LVNFTA++ +L+GA V+ +  +    E+   Y  I
Sbjct: 176 LGFLEKLTFLESSGLDKYGTEAFLVNFTALVVVLFGASVVVAAIAPVRLEEPQGYVPI 233

Two-heme-containing cytochrome. Catalyzes ascorbate-dependent trans-membrane electron transfer by utilizing a concerted H(+)/e(-) transfer mechanism.

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6I681|ACET1_MAIZE Ascorbate-specific transmembrane electron transporter 1 OS=Zea mays GN=ZCYB PE=1 SV=1

 Score =  217 bits (552), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 109/178 (61%), Positives = 135/178 (75%), Gaps = 1/178 (0%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRK-EVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVN 59
           MLIG +IIGGEAIM Y+ L     +  K+IHL+LH IAL+LG +GIY AFK HNES I N
Sbjct: 56  MLIGYVIIGGEAIMVYRVLPTSNHDTTKLIHLILHGIALVLGAVGIYFAFKNHNESGIAN 115

Query: 60  LYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAA 119
           LYSLHSW+GI  I+LYGIQW+ GFV FF+PG +  ++   LPWHVLFGLFVYILA+ANA 
Sbjct: 116 LYSLHSWIGIGTITLYGIQWIIGFVTFFFPGAAPNVKKGVLPWHVLFGLFVYILALANAE 175

Query: 120 IGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPAEDDYSYSAI 177
           +GFLEKLTFLE+SGL KYG+EA LVNFTA++ +L+GA V+ +  +    E+   Y  I
Sbjct: 176 LGFLEKLTFLESSGLDKYGTEAFLVNFTALVVVLFGASVVVAAIAPVRLEEPQGYDPI 233

Two-heme-containing cytochrome. Catalyzes ascorbate-dependent trans-membrane electron transfer by utilizing a concerted H(+)/e(-) transfer mechanism.

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q7XMK3|ACET2_ORYSJ Probable ascorbate-specific transmembrane electron transporter 2 OS=Oryza sativa subsp. japonica GN=Os04g0533500 PE=2 SV=2

 Score =  202 bits (515), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 100/150 (66%), Positives = 120/150 (80%), Gaps = 1/150 (0%)

Query: 1   MLIGLIIIGGEAIMSYKGL-NLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVN 59
           MLIG II+G EAIM YK    L  +  K+IHL+LHAIA++LG +GIY AFK+HNES I N
Sbjct: 56  MLIGYIILGSEAIMIYKIFPKLNHDTTKLIHLILHAIAIVLGAVGIYCAFKFHNESGIAN 115

Query: 60  LYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAA 119
           LYSLHSWLGI  ISLYGIQW++GFV FFYPG +  +R  +LPWHVLFGLFVY+L +A A 
Sbjct: 116 LYSLHSWLGIGTISLYGIQWIFGFVAFFYPGAAPHVRRGALPWHVLFGLFVYVLTLATAE 175

Query: 120 IGFLEKLTFLENSGLAKYGSEALLVNFTAV 149
           +G LEKLTFL++SGL KYG+EA LVNFT +
Sbjct: 176 LGLLEKLTFLQSSGLDKYGAEAFLVNFTGL 205

Two-heme-containing cytochrome. Catalyzes ascorbate-dependent trans-membrane electron transfer by utilizing a concerted H(+)/e(-) transfer mechanism.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9SWS1|ACFR2_ARATH Probable transmembrane ascorbate ferrireductase 2 OS=Arabidopsis thaliana GN=CYB561B PE=2 SV=1

 Score =  162 bits (410), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 78/172 (45%), Positives = 113/172 (65%), Gaps = 1/172 (0%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           M+IGLI+  GEA+++YK +   K +KK++HL L   A IL +IG++AA K+H +  I N 
Sbjct: 55  MVIGLILFNGEAMLAYKSVQGTKNLKKLVHLTLQLTAFILSLIGVWAALKFHIDKGIENF 114

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSWLG+A + L+  QW  GFV ++YPGGS   R+  +PWHV  G+ +Y LA+  A  
Sbjct: 115 YSLHSWLGLACLFLFAFQWAAGFVTYWYPGGSRNSRASLMPWHVFLGISIYALALVTATT 174

Query: 121 GFLEKLTFLE-NSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPAEDD 171
           G LEK+TFL+ N  + +Y +EA+LVN   V+ ++ G FVI  V +    +D 
Sbjct: 175 GILEKVTFLQVNQVITRYSTEAMLVNTMGVLILILGGFVILGVVTPVSGKDQ 226

Two-heme-containing cytochrome. Catalyzes ascorbate-dependent trans-membrane ferric-chelate reduction.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 5

EC: .

EC: 1

>sp|Q9C540|ACFR4_ARATH Probable transmembrane ascorbate ferrireductase 4 OS=Arabidopsis thaliana GN=CYB561D PE=2 SV=1

 Score =  125 bits (314), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 90/146 (61%), Gaps = 2/146 (1%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           M+IG I++ GEAI+ ++ L   ++ KK +HL L  +AL   + GI+  F Y       N 
Sbjct: 48  MVIGFILVSGEAILIHRWLPGSRKTKKAVHLWLQGMALASAVFGIWTKFHY-QRGVFANF 106

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSW+G+  +SL+  QW+ GF+ F++ G     R+  LPWHV  GL+ Y LA+A A  
Sbjct: 107 YSLHSWMGLLSVSLFAAQWVTGFMSFWHRGEVRTTRTTFLPWHVFLGLYTYGLAIATAET 166

Query: 121 GFLEKLTFLE-NSGLAKYGSEALLVN 145
           G LEKLTFL+    + + GSE++ VN
Sbjct: 167 GLLEKLTFLQTKRNVPRRGSESMTVN 192

Two-heme-containing cytochrome. May catalyze ascorbate-dependent trans-membrane ferric-chelate reduction.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 5

EC: .

EC: 1

>sp|Q67ZF6|ACFR3_ARATH Probable transmembrane ascorbate ferrireductase 3 OS=Arabidopsis thaliana GN=CYB561C PE=2 SV=1

 Score =  123 bits (309), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 99/163 (60%), Gaps = 4/163 (2%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           M  G + + G+A+M+YK      +V+K++H  LH I L+LGI+GI AAF++H++  + ++
Sbjct: 61  MYCGFLFLVGQAMMTYKTAYASHQVQKMVHGGLHLIGLVLGIVGICAAFRFHDKVNLKDM 120

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
            SLHSW+G+    L G+QWL+G   F  P  S+G R+  +PWHVL G  +  + +  A  
Sbjct: 121 VSLHSWIGLTTFILLGVQWLFGAFTFLAPQSSSGTRTRMMPWHVLGGRALLYMGIVAALT 180

Query: 121 GFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVA 163
           G +++ T L  S      +E+ L+NF  +  +L+G  V FSVA
Sbjct: 181 GLMQRATMLGQS----TNAESRLINFLGLAILLFGVSVDFSVA 219

Two-heme-containing cytochrome. May catalyze ascorbate-dependent trans-membrane ferric-chelate reduction.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 5

EC: .

EC: 1

>sp|Q60720|CY561_MOUSE Cytochrome b561 OS=Mus musculus GN=Cyb561 PE=2 SV=2

 Score =  121 bits (304), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 102/177 (57%), Gaps = 8/177 (4%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVK---KVIHLVLHAIALILGIIGIYAAFKYHNESAI 57
           M+IG+I + G+A++ Y+    R+E K   K++H +LH  A I+ ++G+ A F YH +   
Sbjct: 56  MVIGMIFLQGDALLVYR--VFRREAKRTTKILHGLLHVFAFIIALVGLVAVFDYHKKKGY 113

Query: 58  VNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVAN 117
            +LYSLHSW GI V  LY +QWL GF  F +PG S  LRS   P H+ FG  +++ +V  
Sbjct: 114 ADLYSLHSWCGILVFVLYFVQWLVGFSFFLFPGASFSLRSRYRPQHIFFGATIFLFSVGT 173

Query: 118 AAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVAS---QGPAEDD 171
           A +G  E L F   S  + +  E +L N   ++ + +G  V++ +A    + P++ +
Sbjct: 174 ALLGLKEALLFKLGSKYSTFEPEGVLANVLGLLLVCFGVVVLYILAQADWKRPSQAE 230

Secretory vesicle-specific electron transport protein.

Mus musculus (taxid: 10090)

>sp|Q5RCZ2|CY561_PONAB Cytochrome b561 OS=Pongo abelii GN=CYB561 PE=2 SV=1

 Score =  121 bits (303), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 93/161 (57%), Gaps = 1/161 (0%)

Query: 1   MLIGLIIIGGEAIMSYKGL-NLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVN 59
           M+IGLI + G+A++ Y+   N  K   KV+H +LH  AL++ ++G+ A F YH +    +
Sbjct: 57  MVIGLIFLQGDALLVYRVFRNEAKRTTKVLHGLLHIFALVIALVGLVAVFDYHRKEGYAD 116

Query: 60  LYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAA 119
           LYSLHSW GI V  LY +QWL GF  F +PG S  LRS   P H+ FG  +++L+V  A 
Sbjct: 117 LYSLHSWCGILVFVLYFVQWLVGFSFFLFPGASFSLRSRYRPQHIFFGATIFLLSVGTAL 176

Query: 120 IGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIF 160
           +G  E L F      + +  E +L N   ++   +G  V++
Sbjct: 177 LGLKEALLFKLRDKYSAFEPEGVLANVLGLLLACFGGAVLY 217

Secretory vesicle-specific electron transport protein.

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
224136998	230	predicted protein [Populus trichocarpa]	1.0	0.769	0.807	1e-75
224120020	226	predicted protein [Populus trichocarpa]	0.966	0.756	0.812	3e-72
358348656	229	Cytochrome b reductase [Medicago truncat	0.977	0.755	0.775	4e-70
388492204	229	unknown [Medicago truncatula]	0.977	0.755	0.775	6e-70
225470171	230	PREDICTED: transmembrane ascorbate ferri	1.0	0.769	0.802	2e-69
77403835	232	cytochrome b561 [Citrullus lanatus]	1.0	0.762	0.731	3e-67
395146529	422	hypothetical protein [Linum usitatissimu	0.960	0.402	0.748	4e-67
449461255	233	PREDICTED: transmembrane ascorbate ferri	1.0	0.759	0.733	5e-66
21553731	237	cytochrome b561 [Arabidopsis thaliana]	1.0	0.746	0.690	1e-65
351724089	231	uncharacterized protein LOC100306179 [Gl	0.909	0.696	0.763	2e-65

>gi|224136998|ref|XP_002322468.1| predicted protein [Populus trichocarpa] gi|118483693|gb|ABK93740.1| unknown [Populus trichocarpa] gi|222869464|gb|EEF06595.1| predicted protein [Populus trichocarpa]

 Score =  287 bits (734), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 143/177 (80%), Positives = 157/177 (88%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           ML GLIIIGGEAIMSYK L L+KEVKK+IHLVLHAIA+ILG +GI AAFK HNES I NL
Sbjct: 54  MLFGLIIIGGEAIMSYKSLPLKKEVKKLIHLVLHAIAIILGCVGIAAAFKNHNESNIANL 113

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSWLGI +ISLYGIQW+YGF++FFYP GS  LRSE LPWHVLFG+FVYILAV NAA+
Sbjct: 114 YSLHSWLGITIISLYGIQWIYGFLVFFYPKGSPTLRSECLPWHVLFGIFVYILAVGNAAL 173

Query: 121 GFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPAEDDYSYSAI 177
           GFLEKLTFLE+SG+AKYGSEALLVNFTAV+T+LYGAFVI SV  Q P EDD SYSAI
Sbjct: 174 GFLEKLTFLESSGIAKYGSEALLVNFTAVVTVLYGAFVILSVLGQAPVEDDDSYSAI 230

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120020|ref|XP_002318222.1| predicted protein [Populus trichocarpa] gi|222858895|gb|EEE96442.1| predicted protein [Populus trichocarpa]

 Score =  276 bits (705), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 139/171 (81%), Positives = 152/171 (88%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           MLIGLIIIGGEAIMSYK L L+KEVKK IHLVLHAIA+ILG +GI AAFK HNES I NL
Sbjct: 54  MLIGLIIIGGEAIMSYKSLPLKKEVKKGIHLVLHAIAIILGSVGIAAAFKNHNESNIANL 113

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSWLGI++ISLYGIQW+YGF++FFYPGGS  +RSESLPWHVLFG+FVYILAV NAA+
Sbjct: 114 YSLHSWLGISIISLYGIQWIYGFIVFFYPGGSAIIRSESLPWHVLFGIFVYILAVGNAAL 173

Query: 121 GFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPAEDD 171
           G LEKLTFLE+SG+ KYG EALLVNFTAVITILYGAFVI SV  Q P EDD
Sbjct: 174 GCLEKLTFLESSGIDKYGPEALLVNFTAVITILYGAFVILSVLGQAPVEDD 224

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358348656|ref|XP_003638360.1| Cytochrome b reductase [Medicago truncatula] gi|217072376|gb|ACJ84548.1| unknown [Medicago truncatula] gi|355504295|gb|AES85498.1| Cytochrome b reductase [Medicago truncatula]

 Score =  268 bits (686), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 135/174 (77%), Positives = 155/174 (89%), Gaps = 1/174 (0%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           MLIGLIIIGGEAI+SYK L L+KEVKK+IHLVLHA AL+LGIIGI AAFK HNES I NL
Sbjct: 54  MLIGLIIIGGEAIISYKSLPLKKEVKKLIHLVLHAHALVLGIIGICAAFKNHNESGIANL 113

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSWLGI VISLYGIQW++GFV+FFYPGGS+ LR ES+PWHVLFGLFVYILA+A +++
Sbjct: 114 YSLHSWLGIGVISLYGIQWIFGFVVFFYPGGSSELRRESVPWHVLFGLFVYILALATSSL 173

Query: 121 GFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQG-PAEDDYS 173
           GFLEKLTFLE+SG+AKYG+EALLVNF A+ITIL+G FV+ S  SQ  PA DDY+
Sbjct: 174 GFLEKLTFLESSGVAKYGAEALLVNFNAIITILFGTFVVLSAISQAPPAADDYA 227

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388492204|gb|AFK34168.1| unknown [Medicago truncatula]

 Score =  268 bits (685), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 135/174 (77%), Positives = 155/174 (89%), Gaps = 1/174 (0%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           MLIGLIIIGGEAI+SYK L L+KEVKK+IHLVLHA AL+LGIIGI AAFK HNES I NL
Sbjct: 54  MLIGLIIIGGEAIISYKSLPLKKEVKKLIHLVLHAHALVLGIIGICAAFKNHNESGIANL 113

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSWLGI VISLYGIQW++GFV+FFYPGGS+ LR ES+PWHVLFGLFVYILA+A +++
Sbjct: 114 YSLHSWLGIGVISLYGIQWIFGFVVFFYPGGSSELRRESVPWHVLFGLFVYILALATSSL 173

Query: 121 GFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQ-GPAEDDYS 173
           GFLEKLTFLE+SG+AKYG+EALLVNF A+ITIL+G FV+ S  SQ  PA DDY+
Sbjct: 174 GFLEKLTFLESSGVAKYGAEALLVNFNAIITILFGTFVVLSAISQTPPAADDYA 227

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470171|ref|XP_002267852.1| PREDICTED: transmembrane ascorbate ferrireductase 1 [Vitis vinifera] gi|147840876|emb|CAN73186.1| hypothetical protein VITISV_041528 [Vitis vinifera] gi|302143891|emb|CBI22752.3| unnamed protein product [Vitis vinifera]

 Score =  266 bits (681), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 142/177 (80%), Positives = 158/177 (89%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           MLIGL+IIGG+AIMSYK L LRKEVKKVIHLVLHAIALILGIIGIYAAFK HNES I NL
Sbjct: 54  MLIGLVIIGGQAIMSYKSLPLRKEVKKVIHLVLHAIALILGIIGIYAAFKNHNESGIANL 113

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSWLGI +ISLYGIQW+YGF++FFYPGG+ GLRS SLPWHVLFGL VY+L V NA +
Sbjct: 114 YSLHSWLGIVLISLYGIQWIYGFLVFFYPGGTLGLRSASLPWHVLFGLLVYVLVVGNAEL 173

Query: 121 GFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPAEDDYSYSAI 177
           GFLEKLTFLE+SGLAKYG+EALLVNFTA++TILYG FV+ +  SQ P E+DY YSAI
Sbjct: 174 GFLEKLTFLESSGLAKYGAEALLVNFTAIVTILYGVFVVMTALSQPPPEEDYGYSAI 230

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|77403835|dbj|BAE46406.1| cytochrome b561 [Citrullus lanatus]

 Score =  259 bits (662), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 131/179 (73%), Positives = 150/179 (83%), Gaps = 2/179 (1%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           ML+GLIIIGGEAI+SYK L LRKEVKKVIHLVLH +AL LGI+GI AAFK HNES I NL
Sbjct: 54  MLLGLIIIGGEAIISYKSLPLRKEVKKVIHLVLHGVALALGIVGIIAAFKNHNESGIANL 113

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSW+GI VISLYG+QW+YGFV FFYPGGS  LR  SLPWHVLFG+ +YILAV N+A+
Sbjct: 114 YSLHSWIGIGVISLYGLQWVYGFVTFFYPGGSADLRRASLPWHVLFGITIYILAVGNSAL 173

Query: 121 GFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPAEDDY--SYSAI 177
           GFLEKLTFLE+SGLAKYG+EA LVNFTA+ T+++  FVI SV SQ   ++D    YSAI
Sbjct: 174 GFLEKLTFLESSGLAKYGTEAFLVNFTAITTVVFALFVILSVISQPCVQEDNHGDYSAI 232

Source: Citrullus lanatus

Species: Citrullus lanatus

Genus: Citrullus

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|395146529|gb|AFN53683.1| hypothetical protein [Linum usitatissimum]

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 128/171 (74%), Positives = 145/171 (84%), Gaps = 1/171 (0%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           MLIGLIIIGGEAI+SYK L L+KE KK+ HL+LH +ALILGIIGIYAAFK+HNES I NL
Sbjct: 54  MLIGLIIIGGEAIISYKSLPLKKEAKKLTHLILHGVALILGIIGIYAAFKFHNESGIDNL 113

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSWLGI VISLYGIQW+YG +IFFYPGGS+ LR  S+PWHVL GLF+++LA+  AAI
Sbjct: 114 YSLHSWLGILVISLYGIQWIYGLIIFFYPGGSSTLRKTSIPWHVLLGLFIFVLAIGTAAI 173

Query: 121 GFLEKLTFLENS-GLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPAED 170
           G LEKLTFLEN   L KYGSEALLVNFTAV+TILYGAFVI SV  +   E+
Sbjct: 174 GLLEKLTFLENGIKLPKYGSEALLVNFTAVVTILYGAFVILSVLGRSQEEE 224

Source: Linum usitatissimum

Species: Linum usitatissimum

Genus: Linum

Family: Linaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461255|ref|XP_004148357.1| PREDICTED: transmembrane ascorbate ferrireductase 1-like [Cucumis sativus] gi|449505226|ref|XP_004162410.1| PREDICTED: transmembrane ascorbate ferrireductase 1-like [Cucumis sativus]

 Score =  255 bits (651), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 132/180 (73%), Positives = 150/180 (83%), Gaps = 3/180 (1%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           ML+GLIIIGGEAIMSYK L LRKEVKKVIHLVLH +AL LGI+GI AAFK HNES I NL
Sbjct: 54  MLLGLIIIGGEAIMSYKSLPLRKEVKKVIHLVLHGVALGLGIVGIIAAFKNHNESGIANL 113

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSW+GI VISLYG+QW+YGF  FFYPGGS  LR  SLPWHV+FGL VY+LAV N+A+
Sbjct: 114 YSLHSWIGIGVISLYGLQWVYGFATFFYPGGSGDLRRVSLPWHVVFGLAVYVLAVGNSAL 173

Query: 121 GFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPA--EDDY-SYSAI 177
           GFLEKLTFLE+ G+ KYG+EA LVNFTA+ TI++  FVI SV SQ  A  EDD+ +YSAI
Sbjct: 174 GFLEKLTFLESGGIPKYGTEAFLVNFTAITTIIFAVFVILSVISQPCAQQEDDHGAYSAI 233

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553731|gb|AAM62824.1| cytochrome b561 [Arabidopsis thaliana]

 Score =  253 bits (647), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 127/184 (69%), Positives = 149/184 (80%), Gaps = 7/184 (3%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           MLIG II+GGEAI+SYK L L K VKK+IHL+LHAIAL LGI GI AAFK HNES I NL
Sbjct: 54  MLIGFIILGGEAIISYKSLPLEKPVKKLIHLILHAIALALGIFGICAAFKNHNESHIPNL 113

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSW+GI VISLYG QW+Y F++FF+PGGST L+S  LPWH + GLFVYILAV NAA+
Sbjct: 114 YSLHSWIGIGVISLYGFQWVYSFIVFFFPGGSTNLKSGLLPWHAMLGLFVYILAVGNAAL 173

Query: 121 GFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPAED-------DYS 173
           GFLEKLTFLEN GL KYGSEA L+NFTA+ITIL+GAFV+ + +++ P+         D+S
Sbjct: 174 GFLEKLTFLENGGLDKYGSEAFLINFTAIITILFGAFVVLTASAESPSPSVSNDDSVDFS 233

Query: 174 YSAI 177
           YSAI
Sbjct: 234 YSAI 237

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724089|ref|NP_001234998.1| uncharacterized protein LOC100306179 [Glycine max] gi|255627789|gb|ACU14239.1| unknown [Glycine max]

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 123/161 (76%), Positives = 144/161 (89%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           ++IGL+++GGEAI+SYK L L+KEVKK+IHLV HAIALILGI+GIY AFKY+NES I NL
Sbjct: 54  IVIGLLVLGGEAIISYKALPLKKEVKKLIHLVFHAIALILGIVGIYTAFKYYNESGIANL 113

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSWLGI VI LYGIQW+YGFVIFF+PGG+  +R  SLPWH LFGLFV++LAV  AA+
Sbjct: 114 YSLHSWLGIGVIVLYGIQWIYGFVIFFFPGGTPDIRRASLPWHALFGLFVFVLAVGTAAL 173

Query: 121 GFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFS 161
           GFLEKLTFLENSGL KYGSEALLVNFTA+IT+L+GAFV+ S
Sbjct: 174 GFLEKLTFLENSGLDKYGSEALLVNFTAIITVLFGAFVVLS 214

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
TAIR|locus:2131859	239	ACYB-2 [Arabidopsis thaliana (	0.943	0.698	0.602	3.1e-51
TAIR|locus:2159858	230	CYB-1 "AT5G38630" [Arabidopsis	0.903	0.695	0.397	8.8e-31
TAIR|locus:2011425	236	AT1G26100 "AT1G26100" [Arabido	0.836	0.627	0.36	4.9e-21
RGD|1310987	250	Cyb561 "cytochrome b-561" [Rat	0.661	0.468	0.401	6.3e-21
MGI|MGI:103253	250	Cyb561 "cytochrome b-561" [Mus	0.661	0.468	0.384	1e-20
UNIPROTKB|F1RKQ5	258	CYBASC3 "Uncharacterized prote	0.644	0.441	0.410	1.7e-20
UNIPROTKB|F1RRW2	252	CYB561 "Cytochrome b561" [Sus	0.644	0.452	0.403	1.7e-20
UNIPROTKB|Q95245	252	CYB561 "Cytochrome b561" [Sus	0.644	0.452	0.403	2.1e-20
RGD|1304670	256	Cyb561a3 "cytochrome b561 fami	0.644	0.445	0.401	4.4e-20
UNIPROTKB|A5D9A7	265	CYBASC3 "Cytochrome b ascorbat	0.649	0.433	0.398	7.2e-20

TAIR|locus:2131859 ACYB-2 [Arabidopsis thaliana (taxid:3702)]

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 106/176 (60%), Positives = 126/176 (71%)

Query:    11 EAIMSYKGLNLRKEVKKXXXXXXXXXXXXXXXXXXYAAFKYHNESAIVNLYSLHSWLGIA 70
             EAI+SYK L L K VKK                   AAFK HNES I NLYSLHSW+GI 
Sbjct:    64 EAIISYKSLPLEKPVKKLIHLILHAIALALGIFGICAAFKNHNESHIPNLYSLHSWIGIG 123

Query:    71 VISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLE 130
             VISLYG QW+Y F++FF+PGGST L+S  LPWH + GLFVYILAV NAA+GFLEKLTFLE
Sbjct:   124 VISLYGFQWVYSFIVFFFPGGSTNLKSGLLPWHAMLGLFVYILAVGNAALGFLEKLTFLE 183

Query:   131 NSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPA-------ED--DYSYSAI 177
             N GL KYGSEA L+NFTA+ITIL+GAFV+ + +++ P+       +D  D+SYSAI
Sbjct:   184 NGGLDKYGSEAFLINFTAIITILFGAFVVLTASAESPSPSPSVSNDDSVDFSYSAI 239

GO:0005576 "extracellular region" evidence=ISM

GO:0008805 "carbon-monoxide oxygenase activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2159858 CYB-1 "AT5G38630" [Arabidopsis thaliana (taxid:3702)]

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 64/161 (39%), Positives = 93/161 (57%)

Query:    11 EAIMSYKGLNLRKEVKKXXXXXXXXXXXXXXXXXXYAAFKYHNESAIVNLYSLHSWLGIA 70
             EA+++YK +   K +KK                  +AA K+H +  I N YSLHSWLG+A
Sbjct:    65 EAMLAYKSVQGTKNLKKLVHLTLQLTAFILSLIGVWAALKFHIDKGIENFYSLHSWLGLA 124

Query:    71 VISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLE 130
              + L+  QW  GFV ++YPGGS   R+  +PWHV  G+ +Y LA+  A  G LEK+TFL+
Sbjct:   125 CLFLFAFQWAAGFVTYWYPGGSRNSRASLMPWHVFLGISIYALALVTATTGILEKVTFLQ 184

Query:   131 -NSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPAED 170
              N  + +Y +EA+LVN   V+ ++ G FVI  V +    +D
Sbjct:   185 VNQVITRYSTEAMLVNTMGVLILILGGFVILGVVTPVSGKD 225

GO:0008805 "carbon-monoxide oxygenase activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009749 "response to glucose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2011425 AT1G26100 "AT1G26100" [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 54/150 (36%), Positives = 77/150 (51%)

Query:    11 EAIMSYKGLNLRKEVKKXXXXXXXXXXXXXXXXXXYAAFKYHNESAIVNLYSLHSWLGIA 70
             EAI+ ++ L   ++ KK                  +  F Y       N YSLHSW+G+ 
Sbjct:    58 EAILIHRWLPGSRKTKKAVHLWLQGMALASAVFGIWTKFHYQR-GVFANFYSLHSWMGLL 116

Query:    71 VISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLE 130
              +SL+  QW+ GF+ F++ G     R+  LPWHV  GL+ Y LA+A A  G LEKLTFL+
Sbjct:   117 SVSLFAAQWVTGFMSFWHRGEVRTTRTTFLPWHVFLGLYTYGLAIATAETGLLEKLTFLQ 176

Query:   131 NS-GLAKYGSEALLVNFTAVITILYGAFVI 159
                 + + GSE++ VN   +   L G  VI
Sbjct:   177 TKRNVPRRGSESMTVNGLGLGLALLGCIVI 206

GO:0008805 "carbon-monoxide oxygenase activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

RGD|1310987 Cyb561 "cytochrome b-561" [Rattus norvegicus (taxid:10116)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 47/117 (40%), Positives = 66/117 (56%)

Query:    47 AAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLF 106
             A F YH +    +LYSLHSW GI+V  LY +QWL GF  F +PG S  LRS   P H  F
Sbjct:   103 AVFDYHKKKGYADLYSLHSWCGISVFVLYFMQWLVGFSFFLFPGASFSLRSRYRPQHTFF 162

Query:   107 GLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVA 163
             G  +++L+V  A +G  E L F   S  + +  E +L N   ++ I +G  V++ +A
Sbjct:   163 GATIFLLSVGTALLGLKEALLFKLGSKYSTFEPEGVLANVLGLLLICFGVVVLYILA 219

GO:0000293 "ferric-chelate reductase activity" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=ISO

MGI|MGI:103253 Cyb561 "cytochrome b-561" [Mus musculus (taxid:10090)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 45/117 (38%), Positives = 65/117 (55%)

Query:    47 AAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLF 106
             A F YH +    +LYSLHSW GI V  LY +QWL GF  F +PG S  LRS   P H+ F
Sbjct:   103 AVFDYHKKKGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLFPGASFSLRSRYRPQHIFF 162

Query:   107 GLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVA 163
             G  +++ +V  A +G  E L F   S  + +  E +L N   ++ + +G  V++ +A
Sbjct:   163 GATIFLFSVGTALLGLKEALLFKLGSKYSTFEPEGVLANVLGLLLVCFGVVVLYILA 219

GO:0000293 "ferric-chelate reductase activity" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0022900 "electron transport chain" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IDA

UNIPROTKB|F1RKQ5 CYBASC3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 48/117 (41%), Positives = 65/117 (55%)

Query:    47 AAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLF 106
             A F +HN   I NLYSLHSWLGI  + L+  QW  GFV+F  P  S  LRS   P HV F
Sbjct:   116 AVFNFHNHEKIPNLYSLHSWLGITTVFLFACQWFLGFVVFLLPWASVRLRSLLKPIHVFF 175

Query:   107 GLFVYILAVANAAIGFLEKLTFLENSGLAKYGS---EALLVNFTAVITILYGAFVIF 160
             G  +  LA+A+   G  EKL F   +G   Y +   EA+  N   ++ +++G  V++
Sbjct:   176 GASILSLAIASVISGINEKLFFSLKNGTTSYSNLPDEAVFANSAGMLVVVFGLLVLY 232

GO:0005764 "lysosome" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1RRW2 CYB561 "Cytochrome b561" [Sus scrofa (taxid:9823)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 46/114 (40%), Positives = 65/114 (57%)

Query:    47 AAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLF 106
             A F YH +  I +LYSLHSW GI V  L+  QWL G   F +PG S  LRS   P HV F
Sbjct:   105 AVFDYHRKKGIADLYSLHSWCGILVFVLFLAQWLVGLGFFLFPGASFSLRSRYRPQHVFF 164

Query:   107 GLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIF 160
             G  +++L+V  A +G  E L F   +  + + SE +L N   ++ + +GA V++
Sbjct:   165 GAAIFLLSVGTALLGLKEALLFQLGTKYSAFESEGILANVLGLLLVAFGAVVLY 218

GO:0000293 "ferric-chelate reductase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q95245 CYB561 "Cytochrome b561" [Sus scrofa (taxid:9823)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 46/114 (40%), Positives = 65/114 (57%)

Query:    47 AAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLF 106
             A F YH +  I +LYSLHSW GI V  L+  QWL G   F +PG S  LRS   P HV F
Sbjct:   105 AVFDYHRKKGIADLYSLHSWCGILVFVLFLAQWLVGLGFFLFPGASFSLRSRYRPQHVFF 164

Query:   107 GLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIF 160
             G  +++L+V  A +G  E L F   +  + + SE +L N   ++ + +GA V++
Sbjct:   165 GAAIFLLSVGTALLGLKEALLFQLGTKYSAFESEGVLANVLGLLLVAFGAVVLY 218

GO:0030658 "transport vesicle membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0022900 "electron transport chain" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1304670 Cyb561a3 "cytochrome b561 family, member A3" [Rattus norvegicus (taxid:10116)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 47/117 (40%), Positives = 66/117 (56%)

Query:    47 AAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLF 106
             A F +HN S I +LYSLHSWLGI  ++L+  QW  GF +F  P  S  LRS   P HV F
Sbjct:   100 AVFGFHNHSKITHLYSLHSWLGITTVALFACQWFLGFAVFLLPWASQWLRSLLKPVHVFF 159

Query:   107 GLFVYILAVANAAIGFLEKLTFLENSGLAKYGS---EALLVNFTAVITILYGAFVIF 160
             G  +  L++A+   G  EKL F+  +    Y S   EA+  N T ++ + +G  V++
Sbjct:   160 GACILSLSIASVISGINEKLFFVLKNATRPYSSLPGEAVFANSTGILVVSFGLLVLY 216

GO:0005764 "lysosome" evidence=ISO

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0022900 "electron transport chain" evidence=IEA

GO:0031902 "late endosome membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|A5D9A7 CYBASC3 "Cytochrome b ascorbate-dependent protein 3" [Bos taurus (taxid:9913)]

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 47/118 (39%), Positives = 67/118 (56%)

Query:    46 YAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVL 105
             +A F++HN + I +LYSLHSWLGI  + L+  QW  GF +F  P  S  LRS   P HV 
Sbjct:    99 HAVFEFHNHAKIPHLYSLHSWLGITTVFLFACQWFLGFSVFLLPWASMWLRSLLKPIHVF 158

Query:   106 FGLFVYILAVANAAIGFLEKLTFLENSGLAKYG---SEALLVNFTAVITILYGAFVIF 160
             FG  +  LA+A+   G  EKL F   +G   Y    SEA+  N   ++ +++G  V++
Sbjct:   159 FGASILSLAIASVVSGINEKLFFSLKNGTKTYSNLPSEAVFANCAGMLVVVFGLLVLY 216

GO:0031902 "late endosome membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0022900 "electron transport chain" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8L856	ACFR1_ARATH	1, ., 1, 6, ., 5, ., 1	0.6774	1.0	0.7405	yes	no
A3A9H6	ACET1_ORYSJ	1, ., -, ., -, ., -	0.6179	1.0	0.7564	yes	no
Q7XMK3	ACET2_ORYSJ	1, ., -, ., -, ., -	0.6666	0.8418	0.6313	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_XV1133 SubName- Full=Putative uncharacterized protein; (231 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	177
PLN02810	231	PLN02810, PLN02810, carbon-monoxide oxygenase	4e-98
cd08766	144	cd08766, Cyt_b561_ACYB-1_like, Plant cytochrome b(	1e-64
PLN02680	232	PLN02680, PLN02680, carbon-monoxide oxygenase	1e-54
pfam03188	137	pfam03188, Cytochrom_B561, Eukaryotic cytochrome b	3e-48
cd08764	214	cd08764, Cyt_b561_CG1275_like, Non-vertebrate eume	6e-42
PLN02351	242	PLN02351, PLN02351, cytochromes b561 family protei	9e-38
smart00665	129	smart00665, B561, Cytochrome b-561 / ferric reduct	2e-35
cd08763	143	cd08763, Cyt_b561_CYB561, Vertebrate cytochrome b(	7e-32
cd08554	131	cd08554, Cyt_b561, Eukaryotic cytochrome b(561)	4e-31
cd08765	153	cd08765, Cyt_b561_CYBRD1, Vertebrate cytochrome b(	6e-25
cd08762	179	cd08762, Cyt_b561_CYBASC3, Vertebrate cytochrome b	6e-22
cd08760	191	cd08760, Cyt_b561_FRRS1_like, Eukaryotic cytochrom	2e-06
cd08761	183	cd08761, Cyt_b561_CYB561D2_like, Eukaryotic cytoch	9e-06

>gnl|CDD|178406 PLN02810, PLN02810, carbon-monoxide oxygenase

 Score =  282 bits (723), Expect = 4e-98
 Identities = 146/178 (82%), Positives = 160/178 (89%), Gaps = 1/178 (0%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           MLIGLIIIGGEAIMSYK L L+KEVKK+IHLVLHAIALILGI GI AAFK HNES I NL
Sbjct: 54  MLIGLIIIGGEAIMSYKSLPLKKEVKKLIHLVLHAIALILGIFGICAAFKNHNESGIANL 113

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSWLGI +ISLYGIQW+YGF++FF+PGGST LRS SLPWHVLFGLFVYILAV NAA+
Sbjct: 114 YSLHSWLGIGIISLYGIQWIYGFIVFFFPGGSTNLRSGSLPWHVLFGLFVYILAVGNAAL 173

Query: 121 GFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPA-EDDYSYSAI 177
           GFLEKLTFLE+ GL KYGSEALLVNFTA+ITILYGAFV+ +  +Q P+ EDDYSYSAI
Sbjct: 174 GFLEKLTFLESGGLDKYGSEALLVNFTAIITILYGAFVVLTALAQSPSDEDDYSYSAI 231

Length = 231

>gnl|CDD|176496 cd08766, Cyt_b561_ACYB-1_like, Plant cytochrome b(561), including the carbon monoxide oxygenase ACYB-1

 Score =  194 bits (495), Expect = 1e-64
 Identities = 79/130 (60%), Positives = 100/130 (76%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           M+IG I + GEAI++YK +   +EV+K +HL LH +AL+LGI+GIYAAFK+HNE  I NL
Sbjct: 15  MVIGFIFLAGEAILAYKTVPGSREVQKAVHLTLHLVALVLGIVGIYAAFKFHNEVGIPNL 74

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSWLGI  ISL+G+QWL+GFV F++PG S   R+  LPWHV  GL +Y LA+A A  
Sbjct: 75  YSLHSWLGIGTISLFGLQWLFGFVTFWFPGASRNTRAALLPWHVFLGLAIYYLAIATAET 134

Query: 121 GFLEKLTFLE 130
           G LEKLTFL+
Sbjct: 135 GLLEKLTFLQ 144

Cytochrome b(561), as found in plants, similar to the Arabidopsis thaliana ACYB-1 gene product, a cytochrome b561 isoform localized to the tonoplast. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), and might be capable of trans-membrane electron transport from intracellular ascorbate to extracellular ferric chelates. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. Length = 144

>gnl|CDD|215365 PLN02680, PLN02680, carbon-monoxide oxygenase

 Score =  172 bits (438), Expect = 1e-54
 Identities = 81/172 (47%), Positives = 120/172 (69%), Gaps = 1/172 (0%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           M+IGL+++ GEA+++YK +   K +KK++HL L  +A  L +IG++AA K+HNE  I N 
Sbjct: 54  MVIGLVLLNGEAMLAYKTVPGTKNLKKLVHLTLQFLAFCLSLIGVWAALKFHNEKGIDNF 113

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSWLG+A + L+ +QW  GFV F+YPGGS   R+  LPWHV FG+++Y LAVA A  
Sbjct: 114 YSLHSWLGLACLFLFSLQWAAGFVTFWYPGGSRNSRASLLPWHVFFGIYIYALAVATATT 173

Query: 121 GFLEKLTFLE-NSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQGPAEDD 171
           G LEK TFL+ N  +++Y +EA+LVN   ++ ++ G FVI ++ +    + D
Sbjct: 174 GILEKATFLQSNKVISRYSTEAMLVNSLGILIVVLGGFVILAIVTPLNGKGD 225

Length = 232

>gnl|CDD|217413 pfam03188, Cytochrom_B561, Eukaryotic cytochrome b561

 Score =  152 bits (387), Expect = 3e-48
 Identities = 67/132 (50%), Positives = 93/132 (70%), Gaps = 3/132 (2%)

Query: 1   MLIGLIIIGGEAIMSYKGL---NLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAI 57
           M++G I + GEAI+ Y+      L K+ KK++H VLH +ALILG++G+ A FK+HNE  I
Sbjct: 6   MVLGFIFLMGEAILVYRSSLTRRLSKKTKKLLHWVLHLLALILGVVGLLAVFKFHNELGI 65

Query: 58  VNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVAN 117
            + YSLHSWLG+  + L+ +QWL GF +F +PG S  +RS  LPWHV FGL +++LA+  
Sbjct: 66  PHFYSLHSWLGLTTVILFLLQWLSGFALFLFPGLSRSIRSLLLPWHVFFGLVIFVLAIVT 125

Query: 118 AAIGFLEKLTFL 129
           A +G LEKL FL
Sbjct: 126 ALLGLLEKLIFL 137

Cytochrome b561 is a secretory vesicle-specific electron transport protein. It is an integral membrane protein, that binds two heme groups non-covalently. This is a eukaryotic family. Members of the 'prokaryotic cytochrome b561' family can be found in Pfam: PF01292. Length = 137

>gnl|CDD|176494 cd08764, Cyt_b561_CG1275_like, Non-vertebrate eumetazoan cytochrome b(561)

 Score =  139 bits (352), Expect = 6e-42
 Identities = 70/165 (42%), Positives = 105/165 (63%), Gaps = 4/165 (2%)

Query: 1   MLIGLIIIGGEAIMSYKGL-NLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHN--ESAI 57
           M++GLI + G +I+ Y+   N RK+  K++H VLH +A IL +IG+ A F  HN  +  I
Sbjct: 31  MVLGLIFLYGNSILVYRVFRNTRKKRLKLLHAVLHLLAFILAVIGLKAVFDSHNLAKPPI 90

Query: 58  VNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVAN 117
            N+YSLHSWLG+  + L+ +QW+ GFV F +PG    LR+  LP HV FGLF+++LAVA 
Sbjct: 91  PNMYSLHSWLGLTAVILFSLQWVGGFVSFLFPGLPETLRAAYLPLHVFFGLFIFVLAVAT 150

Query: 118 AAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIFSV 162
           A +G  EK  F  N   +   +E +L NF  ++ +++G  V++ V
Sbjct: 151 ALLGITEKAFFSLNK-YSNLPAEGVLGNFIGIVLVIFGGLVVYLV 194

Cytochrome b(561), as found in non-vertebrate eumetazoans, similar to the Drosophila melanogaster CG1275 gene product. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. Length = 214

>gnl|CDD|215201 PLN02351, PLN02351, cytochromes b561 family protein

 Score =  129 bits (326), Expect = 9e-38
 Identities = 70/167 (41%), Positives = 101/167 (60%), Gaps = 2/167 (1%)

Query: 1   MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL 60
           M+IG I+I GEAI+ ++ L   ++ KK +HL L  +AL  G+ GI+  F    +  + N 
Sbjct: 58  MVIGFILISGEAILVHRWLPGSRKTKKSVHLWLQGLALASGVFGIWTKFHG-QDGIVANF 116

Query: 61  YSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAI 120
           YSLHSW+G+  +SL+G QWL GF+ F++ G     R+  LPWHV  GL+ Y LAVA A  
Sbjct: 117 YSLHSWMGLICVSLFGAQWLTGFMSFWHRGEMRTTRTTVLPWHVFLGLYTYGLAVATAET 176

Query: 121 GFLEKLTFLE-NSGLAKYGSEALLVNFTAVITILYGAFVIFSVASQG 166
           G LEKLTFL+    ++K+GSE+++VN   +   L    VI +     
Sbjct: 177 GLLEKLTFLQTKRNVSKHGSESMVVNGLGLGLALLSGIVILAAVLPK 223

Length = 242

>gnl|CDD|214769 smart00665, B561, Cytochrome b-561 / ferric reductase transmembrane domain

 Score =  120 bits (303), Expect = 2e-35
 Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 1   MLIGLIIIGGEAIMSYKGL--NLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIV 58
           M++G   + GEAI+  + L   L K    ++H+VL  +AL+LG+IG+ A F  HNES I 
Sbjct: 6   MILGFGFLMGEAILVARPLTRFLSKPTWFLLHVVLQILALVLGVIGLLAIFISHNESGIA 65

Query: 59  NLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANA 118
           N YSLHSWLG+A   L G+QWL GF+    PG  +  RS   P+H   GL  +ILA+   
Sbjct: 66  NFYSLHSWLGLAAFVLAGLQWLSGFLRPLPPGLPSKYRSYLNPYHRFVGLAAFILAIVTI 125

Query: 119 AIGF 122
            +G 
Sbjct: 126 FLGL 129

Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue, termed Dcytb, is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders. Length = 129

>gnl|CDD|176493 cd08763, Cyt_b561_CYB561, Vertebrate cytochrome b(561), CYB561 gene product

 Score =  111 bits (279), Expect = 7e-32
 Identities = 52/129 (40%), Positives = 80/129 (62%), Gaps = 1/129 (0%)

Query: 1   MLIGLIIIGGEAIMSYKGL-NLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVN 59
           M++GL+ + GEA++ Y+   N  K   K++H +LH +AL++ ++G+ A F YH  +   +
Sbjct: 14  MVLGLVFLCGEALLVYRVFRNETKRSTKILHGLLHIMALVISLVGLVAVFDYHQANGYPD 73

Query: 60  LYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAA 119
           +YSLHSW GI    LY +QWL GF  F +PG S  LRS+  P H  FG  +++ +V  + 
Sbjct: 74  MYSLHSWCGILTFVLYFLQWLIGFSFFLFPGASFTLRSQYKPLHEFFGRALFLSSVGTSL 133

Query: 120 IGFLEKLTF 128
           +G  EKL F
Sbjct: 134 LGLTEKLLF 142

Cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. Length = 143

>gnl|CDD|176489 cd08554, Cyt_b561, Eukaryotic cytochrome b(561)

 Score =  108 bits (273), Expect = 4e-31
 Identities = 53/123 (43%), Positives = 80/123 (65%), Gaps = 1/123 (0%)

Query: 1   MLIGLIIIGGEAIMSYKGL-NLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVN 59
           M+IG + + GEA++ Y+    L K   K++H +LH +A +LG++G+ A F +HN   I N
Sbjct: 9   MVIGFVFLMGEALLVYRVFRLLTKRALKLLHAILHLLAFVLGLVGLLAVFLFHNAGGIAN 68

Query: 60  LYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAA 119
           LYSLHSWLG+A + L+ +Q+L GFV+F  P      RS  LP+H  FGL +++LA+A   
Sbjct: 69  LYSLHSWLGLATVLLFLLQFLSGFVLFLLPLLRLSYRSSLLPFHRFFGLAIFVLAIATIL 128

Query: 120 IGF 122
           +G 
Sbjct: 129 LGI 131

Cytochrome b(561) is a family of endosomal or secretory vesicle-specific electron transport proteins. They are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. This is an exclusively eukaryotic family. Members of the prokaryotic cytochrome b561 family are not deemed homologous. Length = 131

>gnl|CDD|176495 cd08765, Cyt_b561_CYBRD1, Vertebrate cytochrome b(561), CYBRD1 gene product

 Score = 93.8 bits (233), Expect = 6e-25
 Identities = 54/131 (41%), Positives = 76/131 (58%), Gaps = 3/131 (2%)

Query: 1   MLIGLIIIGGEAIMSYK---GLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAI 57
           M+IG I I G AI+ Y+        K + K+IH  LH +A IL II + A F +HN   I
Sbjct: 19  MVIGFIFIQGIAIIVYRLPWTWKCSKLLMKLIHAGLHILAFILAIISVVAVFVFHNAKNI 78

Query: 58  VNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVAN 117
            N+YSLHSW+G+A + LY +Q + G  ++  P     LR+  +P HV  GLF++   +A 
Sbjct: 79  PNMYSLHSWVGLAAVILYPLQLVLGISVYLLPVAPVRLRAALMPLHVYSGLFIFGTVIAT 138

Query: 118 AAIGFLEKLTF 128
           A +G  EKL F
Sbjct: 139 ALMGITEKLIF 149

Duodenal cytochrome b or ferric-chelate reductase 3, a cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. This protein is expressed at the brush border of duodenal enterocytes and may play a role in the uptake of dietary Fe(3+), facilitating its transport into the mucosal cells. It may also be involved in the recycling of extracellular ascorbate in erythrocyte membranes, and act as a ferrireductase in epithelial cells of the respiratory system. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. Length = 153

>gnl|CDD|176492 cd08762, Cyt_b561_CYBASC3, Vertebrate cytochrome b(561), CYBASC3 gene product

 Score = 86.8 bits (215), Expect = 6e-22
 Identities = 49/131 (37%), Positives = 73/131 (55%), Gaps = 3/131 (2%)

Query: 1   MLIGLIIIGGEAIMSYK---GLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAI 57
           M+ G++++ G A + Y+        K   K++H  L  +A IL +IG+ A F +HN    
Sbjct: 42  MVTGMVVLYGNAALVYRIPLTWGGPKLPWKLLHAGLLLLAFILTVIGLCAVFNFHNVHHT 101

Query: 58  VNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVAN 117
            NLYSLHSW+GI  ++L+  QW+ GF  F  P     LR+   P HV FG  + +L++A+
Sbjct: 102 ANLYSLHSWVGICTVALFTCQWVMGFTSFLLPWAPMWLRALVKPIHVFFGAMILVLSIAS 161

Query: 118 AAIGFLEKLTF 128
              G  EKL F
Sbjct: 162 CISGINEKLFF 172

Cytochrome b ascorbate-dependent 3, as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. Length = 179

>gnl|CDD|176490 cd08760, Cyt_b561_FRRS1_like, Eukaryotic cytochrome b(561), including the FRRS1 gene product

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 30/134 (22%), Positives = 50/134 (37%), Gaps = 13/134 (9%)

Query: 29  IHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFY 88
           +H  L  +A++L I G               L + H+ LGI V++L  +Q L G      
Sbjct: 71  LHAGLQLLAVLLAIAGFVLGIVLVQGGGGS-LNNAHAILGIIVLALAILQPLLG---LLR 126

Query: 89  PGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTA 148
           P   +  RS     H   G    ILA+ N  +G                  +A  + +  
Sbjct: 127 PHPGSKKRSIWNWAHRWLGRAALILAIVNIFLGLDL---------AGAGTPKAWKIAYGV 177

Query: 149 VITILYGAFVIFSV 162
           V+ +L   ++I  +
Sbjct: 178 VVAVLALVYLILEI 191

Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. Length = 191

>gnl|CDD|176491 cd08761, Cyt_b561_CYB561D2_like, Eukaryotic cytochrome b(561), including the CYB561D2 gene product

 Score = 43.4 bits (103), Expect = 9e-06
 Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 6/130 (4%)

Query: 1   MLIGLIIIGGEAIMSYKGLN----LRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESA 56
           M +G +++  EA++  +  +    L ++ K  +H +L  +AL+  + G+ A +     + 
Sbjct: 28  MSLGFLLLMTEALLLLQPTSSLTKLARKTKVRLHWILQLLALLCILAGLVAIYYNKERNG 87

Query: 57  IVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPW--HVLFGLFVYILA 114
             +  S H  LG+  + L  +Q L G  + + PG   G          H L G   Y+L 
Sbjct: 88  KPHFTSWHGILGLVTVILIVLQALGGLALLYPPGLRRGESKAKKLKKYHRLSGYVAYLLG 147

Query: 115 VANAAIGFLE 124
           +A   +G   
Sbjct: 148 LATLVLGLET 157

Cytochrome b(561), as found in eukaryotes, similar to and including the human CYB561D2 gene product. CYB561D2 is a candidate tumor suppressor. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. Length = 183

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	177
PLN02810	231	carbon-monoxide oxygenase	100.0
PLN02680	232	carbon-monoxide oxygenase	100.0
PLN02351	242	cytochromes b561 family protein	100.0
cd08764	214	Cyt_b561_CG1275_like Non-vertebrate eumetazoan cyt	100.0
KOG1619	245	consensus Cytochrome b [Energy production and conv	100.0
cd08766	144	Cyt_b561_ACYB-1_like Plant cytochrome b(561), incl	100.0
cd08765	153	Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBR	100.0
cd08762	179	Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYB	100.0
cd08763	143	Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB5	100.0
cd08554	131	Cyt_b561 Eukaryotic cytochrome b(561). Cytochrome	99.97
PF03188	137	Cytochrom_B561: Eukaryotic cytochrome b561; InterP	99.97
cd08761	183	Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561	99.97
smart00665	129	B561 Cytochrome b-561 / ferric reductase transmemb	99.96
cd08760	191	Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561),	99.89
PF10348	105	DUF2427: Domain of unknown function (DUF2427); Int	98.11
smart00665	129	B561 Cytochrome b-561 / ferric reductase transmemb	97.27
PF03188	137	Cytochrom_B561: Eukaryotic cytochrome b561; InterP	97.13
cd08554	131	Cyt_b561 Eukaryotic cytochrome b(561). Cytochrome	97.07
PF00033	188	Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; I	96.94
cd08763	143	Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB5	96.83
KOG4293	403	consensus Predicted membrane protein, contains DoH	96.8
cd08761	183	Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561	96.8
PF13301	175	DUF4079: Protein of unknown function (DUF4079)	96.74
cd08760	191	Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561),	96.43
cd08764	214	Cyt_b561_CG1275_like Non-vertebrate eumetazoan cyt	95.51
PF13706	37	PepSY_TM_3: PepSY-associated TM helix	95.14
PF01292	182	Ni_hydr_CYTB: Prokaryotic cytochrome b561; InterPr	94.9
cd08766	144	Cyt_b561_ACYB-1_like Plant cytochrome b(561), incl	94.18
PLN02680	232	carbon-monoxide oxygenase	94.07
PLN02351	242	cytochromes b561 family protein	92.98
TIGR02125	211	CytB-hydogenase Ni/Fe-hydrogenase, b-type cytochro	92.69
PRK11513	176	cytochrome b561; Provisional	92.67
cd08762	179	Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYB	92.27
PF04238	133	DUF420: Protein of unknown function (DUF420); Inte	91.79
PF13172	34	PepSY_TM_1: PepSY-associated TM helix	91.67
PF00033	188	Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; I	91.25
PF13706	37	PepSY_TM_3: PepSY-associated TM helix	90.41
cd08765	153	Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBR	88.47
COG3038	181	CybB Cytochrome B561 [Energy production and conver	87.42
PF13703	88	PepSY_TM_2: PepSY-associated TM helix	85.37
COG3038	181	CybB Cytochrome B561 [Energy production and conver	85.35
PF01292	182	Ni_hydr_CYTB: Prokaryotic cytochrome b561; InterPr	85.1
PLN02810	231	carbon-monoxide oxygenase	84.31
PF11158	150	DUF2938: Protein of unknown function (DUF2938); In	82.26
PF13703	88	PepSY_TM_2: PepSY-associated TM helix	81.74

>PLN02810 carbon-monoxide oxygenase

Probab=100.00  E-value=2.3e-58  Score=381.56  Aligned_cols=177  Identities=82%  Similarity=1.348  Sum_probs=171.8

Q ss_pred             CeeehhhHhhhHHHhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhh
Q 030438            1 MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWL   80 (177)
Q Consensus         1 M~~gfv~l~~eaiL~~r~~~~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~   80 (177)
                      |++||+++++|||++||..|.+|+.+|.+|+.+|.+|++|+++|++++|+|||++++|||||+|||+|++|+++|.+||+
T Consensus        54 Mv~Gfi~l~geAIL~Yr~~~~~k~~~K~iH~~lh~~Al~l~vvGl~Avf~~Hn~~~i~nlySLHSWlGl~tv~Lf~lQw~  133 (231)
T PLN02810         54 MLIGLIIIGGEAIMSYKSLPLKKEVKKLIHLVLHAIALILGIFGICAAFKNHNESGIANLYSLHSWLGIGIISLYGIQWI  133 (231)
T ss_pred             HHHHHHHHhhHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999889999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChhhHHHHHHHHHHHHHHHHhhh
Q 030438           81 YGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVIF  160 (177)
Q Consensus        81 ~G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~ek~~f~~~~~~~~~~~e~~~~n~~gl~~~~~~~~v~~  160 (177)
                      .|++.|++|+.+++.|++++|+|+++|+.+|+++++|+++|+.||++|.++++|+++++|++++|++|+++++||++|++
T Consensus       134 ~Gf~~Fl~P~~~~~~R~~~lP~Hv~~Gl~if~LAiata~lGi~EKl~Fl~~~~~~~~~~Ea~lvN~~Glliv~fg~~V~~  213 (231)
T PLN02810        134 YGFIVFFFPGGSTNLRSGSLPWHVLFGLFVYILAVGNAALGFLEKLTFLESGGLDKYGSEALLVNFTAIITILYGAFVVL  213 (231)
T ss_pred             HHHHHHhcCCCchhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCchhhhHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998878999999999999999999999999999


Q ss_pred             hccccCCC-CCCCCCCCC
Q 030438          161 SVASQGPA-EDDYSYSAI  177 (177)
Q Consensus       161 ~~~~~~~~-~~~~~~~~~  177 (177)
                      .++.+.|+ +||+.|+++
T Consensus       214 ~~~~~~~~~~~~~~~~~~  231 (231)
T PLN02810        214 TALAQSPSDEDDYSYSAI  231 (231)
T ss_pred             hhccCCCCCCCccccccC
Confidence            99999886 888999874

>PLN02680 carbon-monoxide oxygenase

Probab=100.00  E-value=1.5e-54  Score=360.24  Aligned_cols=171  Identities=47%  Similarity=0.931  Sum_probs=164.8

Q ss_pred             CeeehhhHhhhHHHhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhh
Q 030438            1 MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWL   80 (177)
Q Consensus         1 M~~gfv~l~~eaiL~~r~~~~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~   80 (177)
                      |++||+++++||||+||+.|.+|+.+|++|+.+|.+|++|+++|+++++++||++++|||||+|||+|++|+++|.+||+
T Consensus        54 M~~Gfi~l~geAIL~yr~~~~~k~~~K~iH~~L~~lA~~l~vvGl~avfk~hn~~~~~nfySlHSWlGl~t~iL~~lQ~~  133 (232)
T PLN02680         54 MVIGLVLLNGEAMLAYKTVPGTKNLKKLVHLTLQFLAFCLSLIGVWAALKFHNEKGIDNFYSLHSWLGLACLFLFSLQWA  133 (232)
T ss_pred             HHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999999889999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCCCCChhhHHHHHHHHHHHHHHHHhh
Q 030438           81 YGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENS-GLAKYGSEALLVNFTAVITILYGAFVI  159 (177)
Q Consensus        81 ~G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~ek~~f~~~~-~~~~~~~e~~~~n~~gl~~~~~~~~v~  159 (177)
                      .|+.+|++|+.+++.|++++|+|+++|+++|+++++|+.+|+.||.+|.+++ +|+++++|++++|++|+++++||++|+
T Consensus       134 ~Gf~~f~~P~~~~~~R~~~~p~H~~~G~~if~LaiaT~~lG~~Ek~~f~~~~~~~~~~~~e~~lvN~~gl~~~~fg~~V~  213 (232)
T PLN02680        134 AGFVTFWYPGGSRNSRASLLPWHVFFGIYIYALAVATATTGILEKATFLQSNKVISRYSTEAMLVNSLGILIVVLGGFVI  213 (232)
T ss_pred             HHHHHHHccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccCCCCchhhhHhHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998754 789999999999999999999999999


Q ss_pred             hhccccCCCCCC
Q 030438          160 FSVASQGPAEDD  171 (177)
Q Consensus       160 ~~~~~~~~~~~~  171 (177)
                      +.++.|.+.++|
T Consensus       214 ~~v~~p~~~~~~  225 (232)
T PLN02680        214 LAIVTPLNGKGD  225 (232)
T ss_pred             Hhhccccccccc
Confidence            999999885554

>PLN02351 cytochromes b561 family protein

Probab=100.00  E-value=6.5e-54  Score=357.35  Aligned_cols=174  Identities=42%  Similarity=0.753  Sum_probs=162.6

Q ss_pred             CeeehhhHhhhHHHhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccC-CCCccchhhHHHHHHHHHHHHHh
Q 030438            1 MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESA-IVNLYSLHSWLGIAVISLYGIQW   79 (177)
Q Consensus         1 M~~gfv~l~~eaiL~~r~~~~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~-~~hf~SlHswlGl~t~~L~~lQ~   79 (177)
                      |++||++++||||++||.+|.+|+.+|.+|+.+|.+|++|+++|+++  ++||+.+ +|||||+|||+|++|+++|++||
T Consensus        58 MviGfi~L~geAILvYR~~~~~~k~~K~lH~~Lh~~Ali~~vvGl~a--~fh~~~~~i~nlySLHSWlGl~tv~Lf~lQw  135 (242)
T PLN02351         58 MVIGFILISGEAILVHRWLPGSRKTKKSVHLWLQGLALASGVFGIWT--KFHGQDGIVANFYSLHSWMGLICVSLFGAQW  135 (242)
T ss_pred             HHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHH--HHhcccCCccchhHHHHHHHHHHHHHHHHHH
Confidence            88999999999999999999888889999999999999999999999  7777765 69999999999999999999999


Q ss_pred             hhhhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCCCCChhhHHHHHHHHHHHHHHHHh
Q 030438           80 LYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLEN-SGLAKYGSEALLVNFTAVITILYGAFV  158 (177)
Q Consensus        80 ~~G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~ek~~f~~~-~~~~~~~~e~~~~n~~gl~~~~~~~~v  158 (177)
                      +.|+.+|++|+.+.+.|++++|+|+++|+++|+++++|+++|+.||.+|.++ ++|+++++|++++|++|+++++||++|
T Consensus       136 v~Gf~~F~~P~~~~~~Ra~~~P~Hv~~Gl~if~LaiaTa~lGl~EKl~F~~~~~~y~~~~~Ea~lvN~~Glliv~fG~~V  215 (242)
T PLN02351        136 LTGFMSFWHRGEMRTTRTTVLPWHVFLGLYTYGLAVATAETGLLEKLTFLQTKRNVSKHGSESMVVNGLGLGLALLSGIV  215 (242)
T ss_pred             HHHHHHHhcCCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccCCchhhhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999975 378999999999999999999999999


Q ss_pred             hhhccccCC--CCCCCCCCC
Q 030438          159 IFSVASQGP--AEDDYSYSA  176 (177)
Q Consensus       159 ~~~~~~~~~--~~~~~~~~~  176 (177)
                      ++.+++|+.  +|+...|+.
T Consensus       216 v~~~~~p~~kr~~~~~~~~~  235 (242)
T PLN02351        216 ILAAVLPKYQSHSSKLVYSS  235 (242)
T ss_pred             HHhhcCccccCCCccCCccc
Confidence            999999954  444567753

>cd08764 Cyt_b561_CG1275_like Non-vertebrate eumetazoan cytochrome b(561)

Probab=100.00  E-value=6.9e-53  Score=347.53  Aligned_cols=166  Identities=42%  Similarity=0.802  Sum_probs=160.4

Q ss_pred             CeeehhhHhhhHHHhhcccc-cccchhHHHHHHHHHHHHHHHHHHHHHHhhhcccc--CCCCccchhhHHHHHHHHHHHH
Q 030438            1 MLIGLIIIGGEAIMSYKGLN-LRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNES--AIVNLYSLHSWLGIAVISLYGI   77 (177)
Q Consensus         1 M~~gfv~l~~eaiL~~r~~~-~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~--~~~hf~SlHswlGl~t~~L~~l   77 (177)
                      |++||+++++|||++||+.| .+|+.+|.+|+.+|.+|++|+++|++++|++||++  ++|||||+|||+|++|++++++
T Consensus        31 M~~Gfi~l~geAiLvyr~~~~~~k~~~k~~H~~L~~lAl~~~ivGl~avf~~hn~~~~~~~hfySlHSwlGl~t~~L~~l  110 (214)
T cd08764          31 MVLGLIFLYGNSILVYRVFRNTRKKRLKLLHAVLHLLAFILAVIGLKAVFDSHNLAKPPIPNMYSLHSWLGLTAVILFSL  110 (214)
T ss_pred             HHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccchHHHHHHHHHHHHHH
Confidence            88999999999999999988 67788899999999999999999999999999998  9999999999999999999999


Q ss_pred             HhhhhhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChhhHHHHHHHHHHHHHHHH
Q 030438           78 QWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAF  157 (177)
Q Consensus        78 Q~~~G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~ek~~f~~~~~~~~~~~e~~~~n~~gl~~~~~~~~  157 (177)
                      ||+.|+++|++|+.+++.|++++|+|+++|+++|+++++|+.+|+.||.+|.++ +|+++++|++++|++|+++++||++
T Consensus       111 Q~~~Gf~~fl~P~~~~~~r~~~~p~H~~~Gl~~fvLaiaT~~lGl~ek~~f~~~-~~~~~~~e~~l~N~~gl~~~~fg~~  189 (214)
T cd08764         111 QWVGGFVSFLFPGLPETLRAAYLPLHVFFGLFIFVLAVATALLGITEKAFFSLN-KYSNLPAEGVLGNFIGIVLVIFGGL  189 (214)
T ss_pred             HHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccccCChhHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999986 5999999999999999999999999


Q ss_pred             hhhhccccCC
Q 030438          158 VIFSVASQGP  167 (177)
Q Consensus       158 v~~~~~~~~~  167 (177)
                      |++++++|+.
T Consensus       190 V~~~~~~~~~  199 (214)
T cd08764         190 VVYLVTEPDY  199 (214)
T ss_pred             HHHhccCccc
Confidence            9999999955

Cytochrome b(561), as found in non-vertebrate eumetazoans, similar to the Drosophila melanogaster CG1275 gene product. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>KOG1619 consensus Cytochrome b [Energy production and conversion]

Probab=100.00  E-value=8.7e-53  Score=348.49  Aligned_cols=167  Identities=48%  Similarity=0.866  Sum_probs=163.0

Q ss_pred             CeeehhhHhhhHHHhhcccc-cccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHh
Q 030438            1 MLIGLIIIGGEAIMSYKGLN-LRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQW   79 (177)
Q Consensus         1 M~~gfv~l~~eaiL~~r~~~-~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~   79 (177)
                      |++|||+++|||+|+||.+| .+|+.+|.+|..+|.+|++++++|++++|++||+++++||||+|||+|++++++|.+||
T Consensus        62 MviGfI~l~GeAiL~YR~~r~~~k~~~KliH~~LH~~Alvl~i~gl~avf~~hn~~~i~NfySLHSWlGl~~v~ly~~Q~  141 (245)
T KOG1619|consen   62 MVIGFIYLQGEAILIYRVFRYTSKKVSKLIHLGLHIIALVLAIIGLCAVFDSHNLVGIANFYSLHSWLGLCVVILYSLQW  141 (245)
T ss_pred             HHHHHHHhccceeeeeehhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccceeeHHHHHHHHHHHHHHHHH
Confidence            89999999999999999988 89999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChhhHHHHHHHHHHHHHHHHhh
Q 030438           80 LYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVI  159 (177)
Q Consensus        80 ~~G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~ek~~f~~~~~~~~~~~e~~~~n~~gl~~~~~~~~v~  159 (177)
                      +.||.+|++|+.+++.|++++|+|+++|+.+|+++++|+++|+.||++|.+.++++.+++|++++|++|+++++||++|+
T Consensus       142 v~GF~tfl~pg~~~~~Rs~lmP~H~~~Gl~~f~lai~ta~~Gl~ek~~f~~~~~~s~~~~e~~l~n~~gv~~il~g~~Vl  221 (245)
T KOG1619|consen  142 VFGFFTFLFPGSPESYRSRLMPWHVFLGLAIFILAIVTALTGLLEKLTFLCFGDLSTKNPEGYLVNFLGVFIILFGVLVL  221 (245)
T ss_pred             HHHHHHHhcCCCCccHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccCHHHHHHHHHHHHHHHHHHHhe
Confidence            99999999999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             hhccccCC
Q 030438          160 FSVASQGP  167 (177)
Q Consensus       160 ~~~~~~~~  167 (177)
                      +.+++|+.
T Consensus       222 ~~v~~~~~  229 (245)
T KOG1619|consen  222 TLVTPPPW  229 (245)
T ss_pred             EEEecCCC
Confidence            99998866

>cd08766 Cyt_b561_ACYB-1_like Plant cytochrome b(561), including the carbon monoxide oxygenase ACYB-1

Probab=100.00  E-value=6.8e-46  Score=289.81  Aligned_cols=130  Identities=61%  Similarity=1.142  Sum_probs=126.7

Q ss_pred             CeeehhhHhhhHHHhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhh
Q 030438            1 MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWL   80 (177)
Q Consensus         1 M~~gfv~l~~eaiL~~r~~~~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~   80 (177)
                      |++||+++|+|||++||..|.+|+.+|++|+.+|.+|++|+++|++++|+|||++++|||||+|||+|++|++++++||+
T Consensus        15 M~~gfi~l~~eAiL~~r~~~~~k~~~k~iH~~l~~la~~~~vvGl~avf~~~~~~~~~~~~SlHSwlGl~t~~L~~lQ~~   94 (144)
T cd08766          15 MVIGFIFLAGEAILAYKTVPGSREVQKAVHLTLHLVALVLGIVGIYAAFKFHNEVGIPNLYSLHSWLGIGTISLFGLQWL   94 (144)
T ss_pred             HHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999999889999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 030438           81 YGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLE  130 (177)
Q Consensus        81 ~G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~ek~~f~~  130 (177)
                      .|+.+|++|+.+++.|++++|+|+++|+++|+++++|+++|+.||.+|.+
T Consensus        95 ~G~~~f~~P~~~~~~r~~~~p~H~~~G~~~~~la~~t~~lGl~ek~~f~~  144 (144)
T cd08766          95 FGFVTFWFPGASRNTRAALLPWHVFLGLAIYYLAIATAETGLLEKLTFLQ  144 (144)
T ss_pred             HHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999889999999999999999999999999999999999864

Cytochrome b(561), as found in plants, similar to the Arabidopsis thaliana ACYB-1 gene product, a cytochrome b561 isoform localized to the tonoplast. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), and might be capable of trans-membrane electron transport from intracellular ascorbate to extracellular ferric chelates. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08765 Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBRD1 gene product

Probab=100.00  E-value=1.9e-45  Score=289.45  Aligned_cols=131  Identities=41%  Similarity=0.706  Sum_probs=125.9

Q ss_pred             CeeehhhHhhhHHHhhcccc---cccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHH
Q 030438            1 MLIGLIIIGGEAIMSYKGLN---LRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGI   77 (177)
Q Consensus         1 M~~gfv~l~~eaiL~~r~~~---~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~l   77 (177)
                      |++||+++++||||+||..+   .+|+.+|++|+.+|.+|++|+++|++++|+|||++++|||||+|||+|++|++++++
T Consensus        19 m~~Gfi~l~geAiL~yr~~~~~~~~k~~~k~iH~~L~~~a~~~~i~Gl~avf~~hn~~~~~~fySlHSwlGl~t~~l~~l   98 (153)
T cd08765          19 MVIGFIFIQGIAIIVYRLPWTWKCSKLLMKLIHAGLHILAFILAIISVVAVFVFHNAKNIPNMYSLHSWVGLAAVILYPL   98 (153)
T ss_pred             HHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCccccHHHHHHHHHHHHHHH
Confidence            78999999999999999654   468999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 030438           78 QWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLEN  131 (177)
Q Consensus        78 Q~~~G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~ek~~f~~~  131 (177)
                      ||+.|+.+|++|+.+.+.|++++|+|+++|+++|+|+++|+++|+.||.+|..+
T Consensus        99 Q~~~Gf~~f~~P~~~~~~r~~~~p~H~~~G~~i~~Lai~t~~lG~~ek~~f~~~  152 (153)
T cd08765          99 QLVLGISVYLLPVAPVRLRAALMPLHVYSGLFIFGTVIATALMGITEKLIFSLK  152 (153)
T ss_pred             HHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            999999999999998899999999999999999999999999999999999763

Duodenal cytochrome b or ferric-chelate reductase 3, a cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. This protein is expressed at the brush border of duodenal enterocytes and may play a role in the uptake of dietary Fe(3+), facilitating its transport into the mucosal cells. It may also be involved in the recycling of extracellular ascorbate in erythrocyte membranes, and act as a ferrireductase in epithelial cells of the respiratory system. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-me

>cd08762 Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYBASC3 gene product

Probab=100.00  E-value=5e-45  Score=292.90  Aligned_cols=132  Identities=37%  Similarity=0.653  Sum_probs=127.3

Q ss_pred             CeeehhhHhhhHHHhhcccc---cccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHH
Q 030438            1 MLIGLIIIGGEAIMSYKGLN---LRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGI   77 (177)
Q Consensus         1 M~~gfv~l~~eaiL~~r~~~---~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~l   77 (177)
                      |++||+++++|||++||..|   .+|+.+|.+|+.+|.+|++|+++|++++|+|||++++|||||+|||+|++|+++|.+
T Consensus        42 Mv~Gfi~L~geAiL~Yr~~~~~~~~k~~~K~~H~~L~~~Al~~~vvGl~avf~~hn~~~~~nlySlHSWlGl~t~~Lf~l  121 (179)
T cd08762          42 MVTGMVVLYGNAALVYRIPLTWGGPKLPWKLLHAGLLLLAFILTVIGLCAVFNFHNVHHTANLYSLHSWVGICTVALFTC  121 (179)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHHHHHHHHHH
Confidence            89999999999999999766   378889999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 030438           78 QWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENS  132 (177)
Q Consensus        78 Q~~~G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~ek~~f~~~~  132 (177)
                      ||+.|+.+|++|+.+++.|++++|+|+++|+.+|+++++|+++|+.||.+|..++
T Consensus       122 Q~~~Gf~~f~~p~~~~~~ra~~~p~H~~~G~~if~Laiat~~lGl~ek~~f~~~~  176 (179)
T cd08762         122 QWVMGFTSFLLPWAPMWLRALVKPIHVFFGAMILVLSIASCISGINEKLFFSLKN  176 (179)
T ss_pred             HHHHHHHHHhcCCCchhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999999999999999999998754

Cytochrome b ascorbate-dependent 3, as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08763 Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB561 gene product

Probab=100.00  E-value=8.8e-44  Score=277.61  Aligned_cols=129  Identities=40%  Similarity=0.808  Sum_probs=125.2

Q ss_pred             CeeehhhHhhhHHHhhcccc-cccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHh
Q 030438            1 MLIGLIIIGGEAIMSYKGLN-LRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQW   79 (177)
Q Consensus         1 M~~gfv~l~~eaiL~~r~~~-~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~   79 (177)
                      |++||+++++||+++||..| .+|+.+|++|+.+|.+|++|+++|+.++++|||++++|||||+|||+|++|++++.+||
T Consensus        14 m~~G~i~l~geaiL~~~~~~~~~k~~~k~~H~~L~~la~~~~~~Gl~av~~~h~~~~~~hf~SlHswlGl~t~~L~~lQ~   93 (143)
T cd08763          14 MVLGLVFLCGEALLVYRVFRNETKRSTKILHGLLHIMALVISLVGLVAVFDYHQANGYPDMYSLHSWCGILTFVLYFLQW   93 (143)
T ss_pred             HHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCccccHHHHHHHHHHHHHHHHH
Confidence            78999999999999999988 68899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 030438           80 LYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFL  129 (177)
Q Consensus        80 ~~G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~ek~~f~  129 (177)
                      +.|+.+|++|+.+++.|++++|+|+++|+++|+++++|+.+|+.||++|+
T Consensus        94 ~~G~~~f~~P~~~~~~r~~~~p~H~~~G~~~f~la~~t~~lG~~ek~~f~  143 (143)
T cd08763          94 LIGFSFFLFPGASFTLRSQYKPLHEFFGRALFLSSVGTSLLGLTEKLLFN  143 (143)
T ss_pred             HHHHHHHHcCCCchHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999998999999999999999999999999999999998873

Cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08554 Cyt_b561 Eukaryotic cytochrome b(561)

Probab=99.97  E-value=2.3e-31  Score=202.99  Aligned_cols=122  Identities=43%  Similarity=0.872  Sum_probs=116.1

Q ss_pred             CeeehhhHhhhHHHhhcccc-cccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHh
Q 030438            1 MLIGLIIIGGEAIMSYKGLN-LRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQW   79 (177)
Q Consensus         1 M~~gfv~l~~eaiL~~r~~~-~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~   79 (177)
                      |++||+++++||++++|..| .+|+.++++|+.+|.++++++++|+.+++++|++++++||+|+|||+|+++++++++|+
T Consensus         9 m~~g~~~l~~~~il~~r~~~~~~~~~~~~~H~~l~~l~~~~~~~G~~~~~~~~~~~~~~h~~s~Hs~lGl~~~~l~~~q~   88 (131)
T cd08554           9 MVIGFVFLMGEALLVYRVFRLLTKRALKLLHAILHLLAFVLGLVGLLAVFLFHNAGGIANLYSLHSWLGLATVLLFLLQF   88 (131)
T ss_pred             HHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccchhHHHHHHHHHHHHHHHHH
Confidence            78999999999999999977 67889999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHH
Q 030438           80 LYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGF  122 (177)
Q Consensus        80 ~~G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl  122 (177)
                      +.|+..++.|+.+++.|+.++++|+++|+++++++++|+.+|+
T Consensus        89 ~~G~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~la~~t~~~G~  131 (131)
T cd08554          89 LSGFVLFLLPLLRLSYRSSLLPFHRFFGLAIFVLAIATILLGI  131 (131)
T ss_pred             HHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999876667899999999999999999999999984

Cytochrome b(561) is a family of endosomal or secretory vesicle-specific electron transport proteins. They are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. This is an exclusively eukaryotic family. Members of the prokaryotic cytochrome b561 family are not deemed homologous.

>PF03188 Cytochrom_B561: Eukaryotic cytochrome b561; InterPro: IPR004877 Cytochrome b561 is a secretory vesicle-specific electron transport protein []

Probab=99.97  E-value=1.8e-30  Score=198.42  Aligned_cols=128  Identities=34%  Similarity=0.515  Sum_probs=120.8

Q ss_pred             CeeehhhHhhhHHHhhcc--cc-cccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHH
Q 030438            1 MLIGLIIIGGEAIMSYKG--LN-LRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGI   77 (177)
Q Consensus         1 M~~gfv~l~~eaiL~~r~--~~-~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~l   77 (177)
                      |++||+++++||++++|.  .+ .+|+.++++|+.+|.++++++++|+.+++.+|++++++||+|+|+|+|+++++++.+
T Consensus         6 m~~~f~~l~~~~il~~r~~~~~~~~~~~~~~~H~~lq~l~~~~~~~G~~~~~~~~~~~~~~h~~s~H~~lG~~~~~l~~~   85 (137)
T PF03188_consen    6 MTIGFVFLMPEGILAARYNPFRRKSRKWWFRIHWILQVLALVFAIIGFVAIFINKNRNGKPHFKSWHSILGLATFVLALL   85 (137)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCchhhhhHHHHHHHHH
Confidence            789999999999999996  33 478888999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030438           78 QWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTF  128 (177)
Q Consensus        78 Q~~~G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~ek~~f  128 (177)
                      |++.|++.++.|+.+++.|+.+.++|+++|+++++++++|+.+|+.|+..|
T Consensus        86 Q~~~G~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~l~~~~i~~G~~~~~~f  136 (137)
T PF03188_consen   86 QPLLGFFRFFMPGLPRKRRPIWNKWHRWLGYLIYVLAIATIFLGLTEKAWF  136 (137)
T ss_pred             HHHHHHHHHccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999989877778999999999999999999999999999888776

It is an integral membrane protein, that binds two haem groups non-covalently. This entry represents the eukaryotic family. Members of the 'bacterial cytochrome b561' family can be found in IPR011577 from INTERPRO.; GO: 0016021 integral to membrane

>cd08761 Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561), including the CYB561D2 gene product

Probab=99.97  E-value=1.1e-30  Score=209.97  Aligned_cols=126  Identities=23%  Similarity=0.413  Sum_probs=116.9

Q ss_pred             CeeehhhHhhhHHHhhcccc----cccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHH
Q 030438            1 MLIGLIIIGGEAIMSYKGLN----LRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYG   76 (177)
Q Consensus         1 M~~gfv~l~~eaiL~~r~~~----~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~   76 (177)
                      |++||+++++||++.+|..+    .+|+.++++|+.+|.++++++++|+.++++||++++++||+|+|||+|+++++++.
T Consensus        28 m~i~~~~l~~~~il~~~~~~~~~~~~~~~~~~~H~~l~~la~~~~~~G~~~~~~~~~~~~~~hf~s~H~~lGl~~~~l~~  107 (183)
T cd08761          28 MSLGFLLLMTEALLLLQPTSSLTKLARKTKVRLHWILQLLALLCILAGLVAIYYNKERNGKPHFTSWHGILGLVTVILIV  107 (183)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccchhHHHHHHHHHHHH
Confidence            78999999999999998643    27888899999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhhhheecCCCC--CcccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030438           77 IQWLYGFVIFFYPGGST--GLRSESLPWHVLFGLFVYILAVANAAIGFLEKL  126 (177)
Q Consensus        77 lQ~~~G~~~fl~p~~~~--~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~ek~  126 (177)
                      +|++.|+..++.|...+  +.|+.++++|+++|+++++++++|+.+|++|++
T Consensus       108 ~Q~~~G~~~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~l~~~t~~lGl~~~~  159 (183)
T cd08761         108 LQALGGLALLYPPGLRRGESKAKKLKKYHRLSGYVAYLLGLATLVLGLETRW  159 (183)
T ss_pred             HHHHHhHHHHhhHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence            99999999998887654  678889999999999999999999999999843

Cytochrome b(561), as found in eukaryotes, similar to and including the human CYB561D2 gene product. CYB561D2 is a candidate tumor suppressor. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>smart00665 B561 Cytochrome b-561 / ferric reductase transmembrane domain

Probab=99.96  E-value=4e-30  Score=195.98  Aligned_cols=122  Identities=43%  Similarity=0.750  Sum_probs=114.1

Q ss_pred             CeeehhhHhhhHHHhhcc-cc-cccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHH
Q 030438            1 MLIGLIIIGGEAIMSYKG-LN-LRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQ   78 (177)
Q Consensus         1 M~~gfv~l~~eaiL~~r~-~~-~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ   78 (177)
                      |++||+++++||++++|. .+ .+|+.++.+|+.+|.++++|+++|+++++++|++++++||+|+|||+|+++++++++|
T Consensus         6 m~~~f~~l~p~gil~~r~~~~~~~~~~~~~~H~~lq~~a~~~~~~g~~~~~~~~~~~~~~~~~s~H~~lGl~~~~l~~~Q   85 (129)
T smart00665        6 MILGFGFLMGEAILVARPLTRFLSKPTWFLLHVVLQILALVLGVIGLLAIFISHNESGIANFYSLHSWLGLAAFVLAGLQ   85 (129)
T ss_pred             HHHHHHHHHHHHHHHhhhHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCccchhHHHHHHHHHHHHHH
Confidence            789999999999999995 44 5788899999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHH
Q 030438           79 WLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGF  122 (177)
Q Consensus        79 ~~~G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl  122 (177)
                      ++.|+..+..|+.+.+.|+.++++|+++|+++++++++|+.+|+
T Consensus        86 ~~~G~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~la~~~~~lG~  129 (129)
T smart00665       86 WLSGFLRPLPPGLPSKYRSYLNPYHRFVGLAAFILAIVTIFLGL  129 (129)
T ss_pred             HHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            99999998877766667889999999999999999999999985

Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue, termed Dcytb, is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders.

>cd08760 Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561), including the FRRS1 gene product

Probab=99.89  E-value=5.2e-22  Score=160.25  Aligned_cols=120  Identities=26%  Similarity=0.220  Sum_probs=108.8

Q ss_pred             CeeehhhHhhhHHHhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhh
Q 030438            1 MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWL   80 (177)
Q Consensus         1 M~~gfv~l~~eaiL~~r~~~~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~   80 (177)
                      |+++|.+++++|++.+|.++.+++.+.++|+.+|.++++++++|+.+++.++ +.+.+|++|.|+|+|++++++..+|++
T Consensus        43 m~iaw~~l~p~gil~ar~~~~~~~~~~~~H~~~q~~~~~~~i~g~~~~~~~~-~~~~~~~~~~H~~lGl~~~~l~~lQ~~  121 (191)
T cd08760          43 MAIAWGILMPIGALLARYFLLGDPVWFYLHAGLQLLAVLLAIAGFVLGIVLV-QGGGGSLNNAHAILGIIVLALAILQPL  121 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCcCcchhhhHHHHHHHHHHHH
Confidence            7899999999999999976556778889999999999999999999999998 567899999999999999999999999


Q ss_pred             hhhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030438           81 YGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLE  124 (177)
Q Consensus        81 ~G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~e  124 (177)
                      .|++   .|...++.|+...++|+++|+++++++++|+.+|+.+
T Consensus       122 ~G~~---~~~~~~~~R~~~~~~H~~~G~~~~~l~~v~i~~G~~~  162 (191)
T cd08760         122 LGLL---RPHPGSKKRSIWNWAHRWLGRAALILAIVNIFLGLDL  162 (191)
T ss_pred             HHHh---cCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9994   4554555788889999999999999999999999985

Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PF10348 DUF2427: Domain of unknown function (DUF2427); InterPro: IPR018825 This entry represents the N-terminal region of a family of proteins conserved in fungi

Probab=98.11  E-value=1e-05  Score=60.22  Aligned_cols=77  Identities=19%  Similarity=0.341  Sum_probs=63.1

Q ss_pred             CeeehhhHhhhHHHhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCc--cchhhHHHHHHHHHHHHH
Q 030438            1 MLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL--YSLHSWLGIAVISLYGIQ   78 (177)
Q Consensus         1 M~~gfv~l~~eaiL~~r~~~~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf--~SlHswlGl~t~~L~~lQ   78 (177)
                      |+++|++++|-+++.-+ .+      .+.|...|++++++.++|+.....++++.  ||+  .+.|+.+|.+.+++..+|
T Consensus        25 m~la~~il~Pi~lvL~~-~~------sr~~~~~q~~~~~l~~~g~~~g~~~~~~~--p~lyp~n~H~k~g~il~~l~~~q   95 (105)
T PF10348_consen   25 MTLAWVILYPIGLVLGN-AR------SRWHLPVQTVFLVLMILGLFLGSVYNGST--PDLYPNNAHGKMGWILFVLMIVQ   95 (105)
T ss_pred             HHHHHHHHHHHHHHHHH-cc------chHHHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHHHHHHH
Confidence            67889999999977543 22      23599999999999999999987766543  455  889999999999999999


Q ss_pred             hhhhhhhh
Q 030438           79 WLYGFVIF   86 (177)
Q Consensus        79 ~~~G~~~f   86 (177)
                      ++.|++.-
T Consensus        96 ~~~gv~~~  103 (105)
T PF10348_consen   96 VILGVILK  103 (105)
T ss_pred             HHHHHHHH
Confidence            99999653

Several of these proteins are annotated as being Ftp1 but this could not be confirmed. Their function is not known.

>smart00665 B561 Cytochrome b-561 / ferric reductase transmembrane domain

Probab=97.27  E-value=0.0065  Score=45.90  Aligned_cols=124  Identities=19%  Similarity=0.128  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHHH-HHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhhhhhhhheecCCCCCcccchhhHHHHHH
Q 030438           29 IHLVLHAIALIL-GIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFG  107 (177)
Q Consensus        29 iH~~l~~~a~~~-~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p~~~~~~r~~~~p~H~~~G  107 (177)
                      .|..+..+++++ .-.|+...-...+..+++....+|-++.++++++.+.-...++...     ....++.+...|.++|
T Consensus         1 ~H~~lm~~~f~~l~p~gil~~r~~~~~~~~~~~~~~H~~lq~~a~~~~~~g~~~~~~~~-----~~~~~~~~~s~H~~lG   75 (129)
T smart00665        1 LHPVLMILGFGFLMGEAILVARPLTRFLSKPTWFLLHVVLQILALVLGVIGLLAIFISH-----NESGIANFYSLHSWLG   75 (129)
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhhHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cccCCCCccchhHHHH
Confidence            489999999955 4455555432133345677889999999999998887777666432     1222355777999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChhhHHHHHHHHHHHHHHHHhh
Q 030438          108 LFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVNFTAVITILYGAFVI  159 (177)
Q Consensus       108 ~~~~~l~~~t~~lGl~ek~~f~~~~~~~~~~~e~~~~n~~gl~~~~~~~~v~  159 (177)
                      ++++++...+...|+...  +....+.+..+.-...=..+|.++.+.+.+-+
T Consensus        76 l~~~~l~~~Q~~~G~~~~--~~~~~~~~~r~~~~~~H~~~G~~~~~la~~~~  125 (129)
T smart00665       76 LAAFVLAGLQWLSGFLRP--LPPGLPSKYRSYLNPYHRFVGLAAFILAIVTI  125 (129)
T ss_pred             HHHHHHHHHHHHHHHHHh--cCCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999731  11100001001001111277888777775544

Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue, termed Dcytb, is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders.

>PF03188 Cytochrom_B561: Eukaryotic cytochrome b561; InterPro: IPR004877 Cytochrome b561 is a secretory vesicle-specific electron transport protein []

Probab=97.13  E-value=0.016  Score=43.79  Aligned_cols=92  Identities=21%  Similarity=0.332  Sum_probs=67.2

Q ss_pred             HHHHHHHHHHHHHH-HHHHHHhhhc-cccCCCCccchhhHHHHHHHHHHHHHhhhhhhhheecCCCCCcccchhhHHHHH
Q 030438           29 IHLVLHAIALILGI-IGIYAAFKYH-NESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLF  106 (177)
Q Consensus        29 iH~~l~~~a~~~~~-iGl~av~~~~-~~~~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p~~~~~~r~~~~p~H~~~  106 (177)
                      .|.+++.+|+.+.. .|+.+...++ +..+++.....|..+-++.+++..+=....+...     ..+.++.+.-+|.+.
T Consensus         1 ~H~~lm~~~f~~l~~~~il~~r~~~~~~~~~~~~~~~H~~lq~l~~~~~~~G~~~~~~~~-----~~~~~~h~~s~H~~l   75 (137)
T PF03188_consen    1 WHPILMTIGFVFLMPEGILAARYNPFRRKSRKWWFRIHWILQVLALVFAIIGFVAIFINK-----NRNGKPHFKSWHSIL   75 (137)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cccCCCCCCCchhhh
Confidence            49999999998666 5665555322 2346678889999999988877776555555322     222334556699999


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 030438          107 GLFVYILAVANAAIGFLEK  125 (177)
Q Consensus       107 G~~~~~l~~~t~~lGl~ek  125 (177)
                      |.+++++.....+.|+...
T Consensus        76 G~~~~~l~~~Q~~~G~~~~   94 (137)
T PF03188_consen   76 GLATFVLALLQPLLGFFRF   94 (137)
T ss_pred             hHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999854

It is an integral membrane protein, that binds two haem groups non-covalently. This entry represents the eukaryotic family. Members of the 'bacterial cytochrome b561' family can be found in IPR011577 from INTERPRO.; GO: 0016021 integral to membrane

>cd08554 Cyt_b561 Eukaryotic cytochrome b(561)

Probab=97.07  E-value=0.019  Score=43.32  Aligned_cols=123  Identities=19%  Similarity=0.154  Sum_probs=78.6

Q ss_pred             HHHHHHHHHHHH-HHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhhhhhhhheecCCCCCcccchhhHHHHH
Q 030438           28 VIHLVLHAIALI-LGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLF  106 (177)
Q Consensus        28 ~iH~~l~~~a~~-~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p~~~~~~r~~~~p~H~~~  106 (177)
                      ..|..++.++++ +...|+. +++.-+..+++...-+|..+..+++.+..+=...++...     ..+.++.+...|.++
T Consensus         3 ~~H~~lm~~g~~~l~~~~il-~~r~~~~~~~~~~~~~H~~l~~l~~~~~~~G~~~~~~~~-----~~~~~~h~~s~Hs~l   76 (131)
T cd08554           3 NWHPLLMVIGFVFLMGEALL-VYRVFRLLTKRALKLLHAILHLLAFVLGLVGLLAVFLFH-----NAGGIANLYSLHSWL   76 (131)
T ss_pred             CccHHHHHHHHHHHHHHHHH-HhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cccCcccchhHHHHH
Confidence            369999999987 4444554 444433345566778999999988887776555555321     123345667799999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCh-hhHHHHHHHHHHHHHHHHhh
Q 030438          107 GLFVYILAVANAAIGFLEKLTFLENSGLAKYGS-EALLVNFTAVITILYGAFVI  159 (177)
Q Consensus       107 G~~~~~l~~~t~~lGl~ek~~f~~~~~~~~~~~-e~~~~n~~gl~~~~~~~~v~  159 (177)
                      |++++++...+...|+...+.  .. .-++.++ -...=..+|.++.+.+...+
T Consensus        77 Gl~~~~l~~~q~~~G~~~~~~--~~-~~~~~r~~~~~~H~~~G~~~~~la~~t~  127 (131)
T cd08554          77 GLATVLLFLLQFLSGFVLFLL--PL-LRLSYRSSLLPFHRFFGLAIFVLAIATI  127 (131)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh--cc-ccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999975321  11 1111111 12222277777776665544

Cytochrome b(561) is a family of endosomal or secretory vesicle-specific electron transport proteins. They are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. This is an exclusively eukaryotic family. Members of the prokaryotic cytochrome b561 family are not deemed homologous.

>PF00033 Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; InterPro: IPR016174 This entry represents a haem-binding domain with a 4-helical bundle structure that is found in transmembrane di-haem cytochromes

Probab=96.94  E-value=0.018  Score=44.95  Aligned_cols=142  Identities=16%  Similarity=0.183  Sum_probs=91.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhh----hccccCCCCccchhhHHHHHHHHHHHHHhhhhhhh----------------
Q 030438           26 KKVIHLVLHAIALILGIIGIYAAFK----YHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVI----------------   85 (177)
Q Consensus        26 ~k~iH~~l~~~a~~~~~iGl~av~~----~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~----------------   85 (177)
                      .+..||..=..-+++...|+...+.    .....+......+|-++|++.+.+..+..+.++..                
T Consensus         8 ~R~~Hw~~al~~~~l~~tG~~~~~~~~~~~~~~~~~~~~~~~H~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (188)
T PF00033_consen    8 TRLLHWLNALLFILLLITGLYLMFPFWWLAGGFPGRQLLRWLHFSLGIVFLALFLLRILWRLFSRRFWKSDDIWFRQIPQ   87 (188)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-TTGGGGGTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHGGGT---GGGHHHHHSHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcccccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhHHHHHHH
Confidence            4689999999999999999998643    22233457789999999999999999999999977                


Q ss_pred             -heecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhcCCCCCChh--hHHH---HHHHHHHHHHHHHh
Q 030438           86 -FFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLE-KLTFLENSGLAKYGSE--ALLV---NFTAVITILYGAFV  158 (177)
Q Consensus        86 -fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~e-k~~f~~~~~~~~~~~e--~~~~---n~~gl~~~~~~~~v  158 (177)
                       ...+..+....+...+..+..-...+.+.++..++|+.- .............+++  ....   +..+.+++++..+-
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iTG~~~~~~~~~~~~~~~~~~~~~~~~~~~iH~~~~~ll~~~i~~H  167 (188)
T PF00033_consen   88 YRLFPRKPPPPSGKYNPLQKLVYWALYLLLLLMAITGLIMLWFFWWPLPPWLLPPPGLAEWARLIHFILAYLLLAFIIIH  167 (188)
T ss_dssp             HHTT-HHHH----SS-HHHHHHHHHHHHHHHHHHHHHHHC-----TTTTGGGS-HHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             122222233445566788888888899999999999874 0000000000111111  1222   26777777888788


Q ss_pred             hhhccccCC
Q 030438          159 IFSVASQGP  167 (177)
Q Consensus       159 ~~~~~~~~~  167 (177)
                      ++.+.....
T Consensus       168 i~~a~~~~~  176 (188)
T PF00033_consen  168 IYAAIFHHF  176 (188)
T ss_dssp             HHHHHHBT-
T ss_pred             HHHHHHHhh
Confidence            887776654

The domain contains four transmembrane helices in an up-and-down bundle, and binds two haem groups in between the helices; three of the four haem-binding residues is conserved between family members. Proteins containing this domain include: N-terminal domain of mitochondrial cytochrome b subunit, in which the domain contains an extra transmembrane linker helix that is absent in plant and cyanobacteria subunits []. Cytochrome b6 subunit of the cytochrome b6f complex, which provides the electronic connection between the photosystems I and II reaction centres of oxygenic photosynthesis, and generates a transmembrane electrochemical proton gradient for adenosine triphosphate synthesis []. Cytochrome gamma subunit of formate dehydrogenase-N (Fdn-N), which acts as a major component of Escherichia coli nitrate respiration []. ; GO: 0022904 respiratory electron transport chain, 0016020 membrane; PDB: 1KQG_C 1KQF_C.

>cd08763 Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB561 gene product

Probab=96.83  E-value=0.087  Score=41.23  Aligned_cols=94  Identities=16%  Similarity=0.206  Sum_probs=70.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhhhhhhhheecCCCCCcccchhhHHHH
Q 030438           26 KKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVL  105 (177)
Q Consensus        26 ~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p~~~~~~r~~~~p~H~~  105 (177)
                      .-..|-.++.+++++...--..+++.....+++.-.-.|.+++++++++...    |+..-+.-+ .....+.+.-+|-|
T Consensus         6 ~Fn~HP~lm~~G~i~l~geaiL~~~~~~~~~k~~~k~~H~~L~~la~~~~~~----Gl~av~~~h-~~~~~~hf~SlHsw   80 (143)
T cd08763           6 QFNVHPLCMVLGLVFLCGEALLVYRVFRNETKRSTKILHGLLHIMALVISLV----GLVAVFDYH-QANGYPDMYSLHSW   80 (143)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHH----HHHHHHHHc-cccCCCccccHHHH
Confidence            3458999999999987777777776555445666778999999988887653    443322212 22345667889999


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 030438          106 FGLFVYILAVANAAIGFLE  124 (177)
Q Consensus       106 ~G~~~~~l~~~t~~lGl~e  124 (177)
                      +|++++++-..+...|+..
T Consensus        81 lGl~t~~L~~lQ~~~G~~~   99 (143)
T cd08763          81 CGILTFVLYFLQWLIGFSF   99 (143)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999853

Cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>KOG4293 consensus Predicted membrane protein, contains DoH and Cytochrome b-561/ferric reductase transmembrane domains [Signal transduction mechanisms]

Probab=96.80  E-value=4.1e-05  Score=68.96  Aligned_cols=117  Identities=25%  Similarity=0.241  Sum_probs=94.9

Q ss_pred             eehhhHhhhHHHhhcccccc---cchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHh
Q 030438            3 IGLIIIGGEAIMSYKGLNLR---KEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQW   79 (177)
Q Consensus         3 ~gfv~l~~eaiL~~r~~~~~---~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~   79 (177)
                      .+..++++-+++.-|.++..   ...|-.+|...|..++++...|....-+.-++ ....-++.|.-+|+.+.++-++|+
T Consensus       221 ~sw~il~p~g~i~ary~~~~~~~~~~Wfy~H~~~~~~~~~~~~~~~~~g~~~~~~-s~~~~~~~h~~~G~~~~~l~~lQ~  299 (403)
T KOG4293|consen  221 LSWGILFPAGAIIARYLRQKPSGDPTWFYIHRACQFTGFILGVAGFVDGLKLSNE-SDGTVYSAHTDLGIILLVLAFLQP  299 (403)
T ss_pred             hhhheeccccceeEEEecccCCCCcchhhhhhhheeeEEEEEeeeeeeeEEEccC-CCceeeeecccchhHHHHHHHHHH
Confidence            34566777777777777643   67788999999999988888887776554443 456789999999999999999999


Q ss_pred             hhhhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 030438           80 LYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFL  123 (177)
Q Consensus        80 ~~G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~  123 (177)
                      +..+   +-|....+.|+..-.+|+..|+...+++++++.-|+.
T Consensus       300 ~~~l---~Rp~~~~k~R~~~nwyH~~~g~~~~~~~~~~i~~~~~  340 (403)
T KOG4293|consen  300 LALL---LRPLPESKIRRYWNWYHHLVGRLSIILGIVNIFDGLE  340 (403)
T ss_pred             HHHH---hcCCcccCceeccceeeeecCcceeeehhhHHhhhHh
Confidence            9887   4477555567777789999999999999999999986

>cd08761 Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561), including the CYB561D2 gene product

Probab=96.80  E-value=0.061  Score=43.05  Aligned_cols=131  Identities=15%  Similarity=0.093  Sum_probs=81.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhccc---cCCCCccchhhHHHHHHHHHHHHHhhhhhhhheecCCCCCcccchhhHH
Q 030438           27 KVIHLVLHAIALILGIIGIYAAFKYHNE---SAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWH  103 (177)
Q Consensus        27 k~iH~~l~~~a~~~~~iGl~av~~~~~~---~~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p~~~~~~r~~~~p~H  103 (177)
                      ...|..++.+++.+..-.....++..+.   .+++.-..+|.++..+++.+..+=....+..    + ....++.+.-+|
T Consensus        21 f~~Hp~~m~i~~~~l~~~~il~~~~~~~~~~~~~~~~~~~H~~l~~la~~~~~~G~~~~~~~----~-~~~~~~hf~s~H   95 (183)
T cd08761          21 FSWHPLLMSLGFLLLMTEALLLLQPTSSLTKLARKTKVRLHWILQLLALLCILAGLVAIYYN----K-ERNGKPHFTSWH   95 (183)
T ss_pred             eehhHHHHHHHHHHHHHHHHHHhcCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh----c-ccCCCCCccchh
Confidence            4699999999999776666555553221   2566677899999998887766443333311    2 222345677799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChhhHHHH-HHHHHHHHHHHHhhhhcc
Q 030438          104 VLFGLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEALLVN-FTAVITILYGAFVIFSVA  163 (177)
Q Consensus       104 ~~~G~~~~~l~~~t~~lGl~ek~~f~~~~~~~~~~~e~~~~n-~~gl~~~~~~~~v~~~~~  163 (177)
                      .++|.+++++.+.+...|+...+.-....+ ++..+.-...+ .+|.++.+.+.+-+..=.
T Consensus        96 ~~lGl~~~~l~~~Q~~~G~~~~~~~~~~~~-~~~r~~~~~~H~~~G~~~~~l~~~t~~lGl  155 (183)
T cd08761          96 GILGLVTVILIVLQALGGLALLYPPGLRRG-ESKAKKLKKYHRLSGYVAYLLGLATLVLGL  155 (183)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHhhHHHhcc-cccHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999965432111110 11111111122 667776666655544433

Cytochrome b(561), as found in eukaryotes, similar to and including the human CYB561D2 gene product. CYB561D2 is a candidate tumor suppressor. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PF13301 DUF4079: Protein of unknown function (DUF4079)

Probab=96.74  E-value=0.023  Score=45.97  Aligned_cols=91  Identities=20%  Similarity=0.182  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhhhhhhhheecCCCCCcccchhhHHHHH
Q 030438           27 KVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLF  106 (177)
Q Consensus        27 k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p~~~~~~r~~~~p~H~~~  106 (177)
                      +..|.-+-...+.+...|..-...+-..++.+=|.|.|-|.|+..+.|...+....-..      .++.++..++.|...
T Consensus        80 r~~H~~~g~~ll~~~~L~~lGG~~~~~~~~~~lf~spH~~~Gl~~~~L~~~s~al~~~i------~~g~~~~~R~lHi~l  153 (175)
T PF13301_consen   80 RDRHYRLGFALLAFMGLGALGGQLGTYRQNGKLFWSPHLWAGLAVVGLMAFSAALVPQI------QKGNRPWARRLHIYL  153 (175)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcchHHHHHcCCCCccCchHHHHHHHHHHHHHHHHHHHHH------ccCCchhHHHHHHHH
Confidence            45666555555554444433322222223334699999999999999999887665522      222355777899999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 030438          107 GLFVYILAVANAAIGFL  123 (177)
Q Consensus       107 G~~~~~l~~~t~~lGl~  123 (177)
                      +..+.++-...+.+|..
T Consensus       154 N~~~l~Lf~~q~itG~~  170 (175)
T PF13301_consen  154 NSLALLLFAWQAITGWR  170 (175)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999999986

>cd08760 Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561), including the FRRS1 gene product

Probab=96.43  E-value=0.16  Score=40.82  Aligned_cols=95  Identities=24%  Similarity=0.271  Sum_probs=71.4

Q ss_pred             ccchhHHHHHHHHHHHHHHHH-HHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhhhhhhhheecCCCCCcccchh
Q 030438           22 RKEVKKVIHLVLHAIALILGI-IGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESL  100 (177)
Q Consensus        22 ~~~~~k~iH~~l~~~a~~~~~-iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p~~~~~~r~~~~  100 (177)
                      ++......|..++.+|+.+.. +|+.+.-.+  ..+.+.-.-+|..+=++++++...-...|+...      .+.++...
T Consensus        31 ~~~~~~~~Hg~lm~iaw~~l~p~gil~ar~~--~~~~~~~~~~H~~~q~~~~~~~i~g~~~~~~~~------~~~~~~~~  102 (191)
T cd08760          31 SSDTLIKAHGVLMAIAWGILMPIGALLARYF--LLGDPVWFYLHAGLQLLAVLLAIAGFVLGIVLV------QGGGGSLN  102 (191)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCchhHHHHHHHHHHHHHHHHHHHHHHHHhh------ccCCCCCc
Confidence            455667999999999998865 566554433  223344555899999988888888888887543      23345566


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHH
Q 030438          101 PWHVLFGLFVYILAVANAAIGFLE  124 (177)
Q Consensus       101 p~H~~~G~~~~~l~~~t~~lGl~e  124 (177)
                      ..|...|.+++++.+.....|+..
T Consensus       103 ~~H~~lGl~~~~l~~lQ~~~G~~~  126 (191)
T cd08760         103 NAHAILGIIVLALAILQPLLGLLR  126 (191)
T ss_pred             CcchhhhHHHHHHHHHHHHHHHhc
Confidence            799999999999999999999954

Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08764 Cyt_b561_CG1275_like Non-vertebrate eumetazoan cytochrome b(561)

Probab=95.51  E-value=0.38  Score=40.13  Aligned_cols=110  Identities=17%  Similarity=0.133  Sum_probs=71.0

Q ss_pred             HHHhhcc-ccc-ccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhhhhhhhheec
Q 030438           12 AIMSYKG-LNL-RKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYP   89 (177)
Q Consensus        12 aiL~~r~-~~~-~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p   89 (177)
                      -.+.||- +.+ ++...-..|-.++.+++++...=-..+++.-...++..-...|.++.++++++...=...-+-.+   
T Consensus         7 W~~~~rgG~~~~~~~~~Fn~HP~lM~~Gfi~l~geAiLvyr~~~~~~k~~~k~~H~~L~~lAl~~~ivGl~avf~~h---   83 (214)
T cd08764           7 WLGKFRGGFSWTGPGLQFNWHPLLMVLGLIFLYGNSILVYRVFRNTRKKRLKLLHAVLHLLAFILAVIGLKAVFDSH---   83 (214)
T ss_pred             hHHHcCCccccCCCCceEeecHHHHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence            4456673 222 22223478999999999765544444555332223444677999999988887664322222111   


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030438           90 GGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLE  124 (177)
Q Consensus        90 ~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~e  124 (177)
                      .......+.+.-+|-|+|+.++++-..+...|+..
T Consensus        84 n~~~~~~~hfySlHSwlGl~t~~L~~lQ~~~Gf~~  118 (214)
T cd08764          84 NLAKPPIPNMYSLHSWLGLTAVILFSLQWVGGFVS  118 (214)
T ss_pred             hcccCCCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            11212445677799999999999999999999964

Cytochrome b(561), as found in non-vertebrate eumetazoans, similar to the Drosophila melanogaster CG1275 gene product. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PF13706 PepSY_TM_3: PepSY-associated TM helix

Probab=95.14  E-value=0.016  Score=35.18  Aligned_cols=31  Identities=35%  Similarity=0.557  Sum_probs=26.0

Q ss_pred             CccchhhHHHHHHHHHHHHHhhhhhhhheec
Q 030438           59 NLYSLHSWLGIAVISLYGIQWLYGFVIFFYP   89 (177)
Q Consensus        59 hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p   89 (177)
                      .+..+|.|+|+++-.++++-.+.|.+..+.|
T Consensus         3 ~~~~~H~W~Gl~~g~~l~~~~~tG~~~~f~~   33 (37)
T PF13706_consen    3 ILRKLHRWLGLILGLLLFVIFLTGAVMVFRD   33 (37)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            4678899999999999999999998776654

>PF01292 Ni_hydr_CYTB: Prokaryotic cytochrome b561; InterPro: IPR011577 Cytochrome b561 is an integral membrane and electron transport protein, that binds two haem groups non-covalently

Probab=94.90  E-value=1  Score=34.92  Aligned_cols=142  Identities=14%  Similarity=0.122  Sum_probs=83.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCc--cchhhHHHHHHHHHHHHHhhhh------------------hhh
Q 030438           26 KKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNL--YSLHSWLGIAVISLYGIQWLYG------------------FVI   85 (177)
Q Consensus        26 ~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf--~SlHswlGl~t~~L~~lQ~~~G------------------~~~   85 (177)
                      .+..||..=..-+.+...|+..-.........+..  ..+|-++|++...+...=....                  ...
T Consensus         6 ~r~~HW~~a~~~i~l~~tG~~~~~~~~~~~~~~~~~~~~~H~~~G~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   85 (182)
T PF01292_consen    6 TRILHWLNALSFIALIATGLWIHFPPPGLYFGDFGGVRNWHVIAGLLLFALLIFRLLWRWRRLFPWSDDVFFQVKNYLYF   85 (182)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHhHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHH
Confidence            35799999999999999999886665554433333  7899999998888766555544                  101


Q ss_pred             heecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC---CCh---hhHHHH-HHHHHHHHHHHHh
Q 030438           86 FFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENSGLAK---YGS---EALLVN-FTAVITILYGAFV  158 (177)
Q Consensus        86 fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~ek~~f~~~~~~~~---~~~---e~~~~n-~~gl~~~~~~~~v  158 (177)
                      ..-.+  .......-|.-+..-.+.+++.++.+++|+.-..  ...+..+.   ...   -..... .++..++.+..+-
T Consensus        86 ~~~~~--~p~~~~~~~~~~~~~~~~~~~~~~~~iTG~~~~~--~~~~~~~~~~~~~~~~~~~~~vH~~~a~~~i~~i~~H  161 (182)
T PF01292_consen   86 LLRGK--PPPAGKYNPGQKIVHWVLYLLLLLLPITGLLLWF--ASAEGFPLFAASPGGAQIARSVHFFLAWLLIAFIILH  161 (182)
T ss_pred             HhcCC--CCCCCcCChHHHHHHHHHHHHHHHHHHHHHHHHH--hhcccCccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11111  1111223334444666677777778888876322  11111111   111   122222 7777777888888


Q ss_pred             hhhccccCCCCCC
Q 030438          159 IFSVASQGPAEDD  171 (177)
Q Consensus       159 ~~~~~~~~~~~~~  171 (177)
                      ++.+.......||
T Consensus       162 v~~a~~~~~~~~~  174 (182)
T PF01292_consen  162 VYAALFHHFRWRD  174 (182)
T ss_pred             HHHHHHHhhhHHH
Confidence            8887776554443

This domain is also found in a number of nickel-dependent hydrogenase subunits which are also B-type cytochromes that interact with quinones and anchor the hydrogenase to the membrane. Members of the 'eukaryotic cytochrome b561' family can be found in IPR004877 from INTERPRO.; GO: 0009055 electron carrier activity, 0016021 integral to membrane

>cd08766 Cyt_b561_ACYB-1_like Plant cytochrome b(561), including the carbon monoxide oxygenase ACYB-1

Probab=94.18  E-value=2.1  Score=33.43  Aligned_cols=92  Identities=18%  Similarity=0.087  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhhhhhhhheecCCCCCcccchhhHHHHH
Q 030438           27 KVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLF  106 (177)
Q Consensus        27 k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p~~~~~~r~~~~p~H~~~  106 (177)
                      -..|-.++.+++++...=-..+++... ..++.-...|.++=++++++...    |+..-+.-+ ....++.+.-+|-|+
T Consensus         8 Fn~HP~lM~~gfi~l~~eAiL~~r~~~-~~k~~~k~iH~~l~~la~~~~vv----Gl~avf~~~-~~~~~~~~~SlHSwl   81 (144)
T cd08766           8 FNVHPVLMVIGFIFLAGEAILAYKTVP-GSREVQKAVHLTLHLVALVLGIV----GIYAAFKFH-NEVGIPNLYSLHSWL   81 (144)
T ss_pred             eeccHHHHHHHHHHHHHHHHHHhhccc-cccchhHHHHHHHHHHHHHHHHH----HHHHHHHHh-cccCccccccHHHHH
Confidence            468999999998766654555666422 23444567899988877776553    443322211 222355677899999


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 030438          107 GLFVYILAVANAAIGFLE  124 (177)
Q Consensus       107 G~~~~~l~~~t~~lGl~e  124 (177)
                      |++++++-......|+..
T Consensus        82 Gl~t~~L~~lQ~~~G~~~   99 (144)
T cd08766          82 GIGTISLFGLQWLFGFVT   99 (144)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999999965

Cytochrome b(561), as found in plants, similar to the Arabidopsis thaliana ACYB-1 gene product, a cytochrome b561 isoform localized to the tonoplast. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), and might be capable of trans-membrane electron transport from intracellular ascorbate to extracellular ferric chelates. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PLN02680 carbon-monoxide oxygenase

Probab=94.07  E-value=2.6  Score=35.66  Aligned_cols=112  Identities=21%  Similarity=0.130  Sum_probs=74.2

Q ss_pred             hHhhhHHHhhcc-ccc---ccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhhhh
Q 030438            7 IIGGEAIMSYKG-LNL---RKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYG   82 (177)
Q Consensus         7 ~l~~eaiL~~r~-~~~---~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~~G   82 (177)
                      .+..-..+-||- +.+   ++...-..|=.++.+++++...--..+++... ..++.-...|-.+=.+++++..    .|
T Consensus        23 ~lv~~W~~~~rgG~aw~~~~~~~~Fn~HPlLM~~Gfi~l~geAIL~yr~~~-~~k~~~K~iH~~L~~lA~~l~v----vG   97 (232)
T PLN02680         23 ALVLTWTVHYRGGLALSSDNKDLIFNVHPVLMVIGLVLLNGEAMLAYKTVP-GTKNLKKLVHLTLQFLAFCLSL----IG   97 (232)
T ss_pred             HHHHHHHHHhCccccccCCCCcceEechHHHHHHHHHHHHHHHHhcccccc-ccchhHHHHHHHHHHHHHHHHH----HH
Confidence            344445556773 322   22223479999999999995544444555332 3345567889998888777664    34


Q ss_pred             hhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030438           83 FVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLE  124 (177)
Q Consensus        83 ~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~e  124 (177)
                      +..-+.-. .++.++.+.-+|-|+|+.++++-......|+..
T Consensus        98 l~avfk~h-n~~~~~nfySlHSWlGl~t~iL~~lQ~~~Gf~~  138 (232)
T PLN02680         98 VWAALKFH-NEKGIDNFYSLHSWLGLACLFLFSLQWAAGFVT  138 (232)
T ss_pred             HHHHHHhc-cccCccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            43322111 233456778899999999999999999999975

>PLN02351 cytochromes b561 family protein

Probab=92.98  E-value=5.2  Score=34.08  Aligned_cols=111  Identities=19%  Similarity=0.213  Sum_probs=73.2

Q ss_pred             hhHhhhHHHhhcc-cccccchhH-----HHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHh
Q 030438            6 IIIGGEAIMSYKG-LNLRKEVKK-----VIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQW   79 (177)
Q Consensus         6 v~l~~eaiL~~r~-~~~~~~~~k-----~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~   79 (177)
                      +.+..--++-||- +.++...+|     ..|-.++.+++++..-=-..+|+.-...++ --..+|-++=.+++++-    
T Consensus        24 ~~lvl~W~~~~rgG~aw~~~~~~~~iffn~HP~lMviGfi~L~geAILvYR~~~~~~k-~~K~lH~~Lh~~Ali~~----   98 (242)
T PLN02351         24 AVLVLYWALFFKSSFLPQSTSQEDLVYAVLHPLLMVIGFILISGEAILVHRWLPGSRK-TKKSVHLWLQGLALASG----   98 (242)
T ss_pred             HHHHHHHHHHhCCccccCCCCCccceeecccHHHHHHHHHHHHHHHHHHhhcccccch-HHHHHHHHHHHHHHHHH----
Confidence            4445555666773 333221222     499999999999877666667765432222 26888988876666554    


Q ss_pred             hhhhhhheecCCCCC-cccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030438           80 LYGFVIFFYPGGSTG-LRSESLPWHVLFGLFVYILAVANAAIGFLE  124 (177)
Q Consensus        80 ~~G~~~fl~p~~~~~-~r~~~~p~H~~~G~~~~~l~~~t~~lGl~e  124 (177)
                      +.|+..-++   ..+ ..+-+.-+|-|+|+.+..+-...-..|+..
T Consensus        99 vvGl~a~fh---~~~~~i~nlySLHSWlGl~tv~Lf~lQwv~Gf~~  141 (242)
T PLN02351         99 VFGIWTKFH---GQDGIVANFYSLHSWMGLICVSLFGAQWLTGFMS  141 (242)
T ss_pred             HHHHHHHHh---cccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456655111   222 235578899999999999999999999975

>TIGR02125 CytB-hydogenase Ni/Fe-hydrogenase, b-type cytochrome subunit

Probab=92.69  E-value=2.9  Score=33.53  Aligned_cols=145  Identities=11%  Similarity=0.107  Sum_probs=82.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhcccc-C------CCCccchhhHHHHHHHHHHHHHhhhhhhhheecCC-------
Q 030438           26 KKVIHLVLHAIALILGIIGIYAAFKYHNES-A------IVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGG-------   91 (177)
Q Consensus        26 ~k~iH~~l~~~a~~~~~iGl~av~~~~~~~-~------~~hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p~~-------   91 (177)
                      .+..||..=..-+++.+.|+.......... +      ...+..+|-++|++.+.+...=.+.++..- .|..       
T Consensus         7 ~R~~HW~~a~~~i~l~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~G~~~~~l~l~rl~~~~~~~-~~~~~r~~~~~   85 (211)
T TIGR02125         7 VRLFHWVRALAIFVLIVTGFYIAYPFLSPPSGEAVHFLQGYIRFVHFAAGFVLIAVLLFRVYLAFVGK-DSRYERFSFRD   85 (211)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cchhhHHhhcC
Confidence            357899988888888888987753321110 1      123568999999988887776665555330 0100       


Q ss_pred             CCCccc-------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCh------------h
Q 030438           92 STGLRS-------------------ESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENSGLAKYGS------------E  140 (177)
Q Consensus        92 ~~~~r~-------------------~~~p~H~~~G~~~~~l~~~t~~lGl~ek~~f~~~~~~~~~~~------------e  140 (177)
                      +.+.++                   .+-|.-+..-...+++.++..++|+.--.   ..++.+..++            +
T Consensus        86 ~~~~~~~~~~~~~y~~~~~~~~~~~~~n~~~k~~~~~l~~~~~~~~lTG~~~~~---~~~~~~~~~~~~f~~~~~~~~~~  162 (211)
T TIGR02125        86 PLNPKAWIKQLRWYLFLGKHPHKKGGYNPLQFVAYFGFIVLILFMILTGLALYY---YHNGLGGLLPSLFGWVEPLFGGL  162 (211)
T ss_pred             CCCHHHHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh---hcCCCCchHHHHHHHHHHHhCCh
Confidence            011000                   11245666677788888889999985311   0000011110            0


Q ss_pred             --hHHH-HHHHHHHHHHHHHhhhhccccCCCCCCCCC
Q 030438          141 --ALLV-NFTAVITILYGAFVIFSVASQGPAEDDYSY  174 (177)
Q Consensus       141 --~~~~-n~~gl~~~~~~~~v~~~~~~~~~~~~~~~~  174 (177)
                        .... ..++.+++++.++-++.+.......+|..-
T Consensus       163 ~~~~~iH~~~a~~l~~~i~~Hi~~a~~h~~~~~~~~l  199 (211)
T TIGR02125       163 ANVRFIHHLGMWAFVIFVPVHVYMAVREDIRSRSGVI  199 (211)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCce
Confidence              1112 266777778888888888876554445443

This model describes a family of cytochrome b proteins which appear to be specific for nickel-iron hydrogenase complexes. Every genome which contains a member of this family posesses a Ni/Fe hydrogenase according to Genome Properties (GenProp0177), and most are gene clustered with other hydrogenase components. Some Ni/Fe hydrogenase-containing species lack a member of this family but contain other CytB homologs (pfam01292) which may substitute for it.

>PRK11513 cytochrome b561; Provisional

Probab=92.67  E-value=1.3  Score=35.39  Aligned_cols=97  Identities=18%  Similarity=0.192  Sum_probs=55.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhhhhhhhheecCCCCCcccchhhHHH
Q 030438           25 VKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHV  104 (177)
Q Consensus        25 ~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p~~~~~~r~~~~p~H~  104 (177)
                      ..+.+||..=.+-+.....|.......+  ...+.++++|-.+|++++.+..+-.+..+. .--|..+.+.++.....=+
T Consensus         8 ~~~~lHWl~a~li~~~~~~~~~~~~~~~--~~~~~~~~~H~s~G~~vl~L~v~Rl~~r~~-~~~P~~~~~~~~~~~~~A~   84 (176)
T PRK11513          8 LQIGIHWLVFLLVIVAYCAMEFRGFFPR--SDRPLINMIHVSCGISILVLMVVRLLLRLK-YPTPPIVPKPKPMMTGLAH   84 (176)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcccch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCCCHHHHHHHH
Confidence            3468999644333333333332221111  122457899999999999999999999994 3334322221111111111


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q 030438          105 LFGLFVYILAVANAAIGFLE  124 (177)
Q Consensus       105 ~~G~~~~~l~~~t~~lGl~e  124 (177)
                      ..-...|++-++..++|+..
T Consensus        85 ~~H~~LY~lli~~plsG~~~  104 (176)
T PRK11513         85 LGHLVIYLLFIALPVIGLVM  104 (176)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            22256788888888888863

>cd08762 Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYBASC3 gene product

Probab=92.27  E-value=5.3  Score=32.48  Aligned_cols=114  Identities=14%  Similarity=0.114  Sum_probs=73.3

Q ss_pred             hhHhhhHHHhhcc-ccc-ccchhHHHHHHHHHHHHHHHHHHHHHHhhhcc-c-cCCCCccchhhHHHHHHHHHHHHHhhh
Q 030438            6 IIIGGEAIMSYKG-LNL-RKEVKKVIHLVLHAIALILGIIGIYAAFKYHN-E-SAIVNLYSLHSWLGIAVISLYGIQWLY   81 (177)
Q Consensus         6 v~l~~eaiL~~r~-~~~-~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~-~-~~~~hf~SlHswlGl~t~~L~~lQ~~~   81 (177)
                      +.+..--++.||- +.+ +.......|-.+..+++++..-=-.++|+.-. . .++.-....|..+=.+++++-.+    
T Consensus        12 ~~lv~~W~~~~rgG~~w~~~~~~Fn~HP~lMv~Gfi~L~geAiL~Yr~~~~~~~~k~~~K~~H~~L~~~Al~~~vv----   87 (179)
T cd08762          12 VVLVVHWNQMWRGGFAWDGSSKNFNWHPVLMVTGMVVLYGNAALVYRIPLTWGGPKLPWKLLHAGLLLLAFILTVI----   87 (179)
T ss_pred             HHHHHHHHHHcCCccCCCCCCCceeehHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHH----
Confidence            3455555666774 332 12225679999999999988554455665221 1 12333568899988877766543    


Q ss_pred             hhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030438           82 GFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLE  124 (177)
Q Consensus        82 G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~e  124 (177)
                      |+..-+--. ..+..+.+.-+|-|.|+.+..+-......|+..
T Consensus        88 Gl~avf~~h-n~~~~~nlySlHSWlGl~t~~Lf~lQ~~~Gf~~  129 (179)
T cd08762          88 GLCAVFNFH-NVHHTANLYSLHSWVGICTVALFTCQWVMGFTS  129 (179)
T ss_pred             HHHHHHHhc-cccCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            433321111 223346677899999999999999999999975

Cytochrome b ascorbate-dependent 3, as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PF04238 DUF420: Protein of unknown function (DUF420); InterPro: IPR007352 This is a predicted membrane protein with four transmembrane helices

Probab=91.79  E-value=3.5  Score=31.84  Aligned_cols=92  Identities=17%  Similarity=0.212  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhhhhhhhh---eecCCCCCcccchhh---
Q 030438           28 VIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIF---FYPGGSTGLRSESLP---  101 (177)
Q Consensus        28 ~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~f---l~p~~~~~~r~~~~p---  101 (177)
                      .+.+.++.++.++...|...+-+.+.+..   -...  ..+.+...+|+.-++..-...   -+++ +...|..+.+   
T Consensus         6 ~l~a~~~~~s~~ll~~g~~~Ir~~~~~~H---r~~M--l~a~~ls~lFlv~Yl~~~~~~g~~~f~g-~~~ir~~Y~~iL~   79 (133)
T PF04238_consen    6 DLNAVLNAISAVLLLIGWYFIRRGRIKLH---RKLM--LTAFVLSALFLVSYLYYHFLGGSTPFGG-PGWIRPVYLFILI   79 (133)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCHHHH---HHHH--HHHHHHHHHHHHHHHHHHHhcCCcccCC-CccHHHHHHHHHH
Confidence            57789999999999999999865433322   1111  122222234444444333211   1111 3345655444   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Q 030438          102 WHVLFGLFVYILAVANAAIGFLEK  125 (177)
Q Consensus       102 ~H~~~G~~~~~l~~~t~~lGl~ek  125 (177)
                      .|..+-..+..+...|...|+.++
T Consensus        80 ~Hi~LA~~~~pL~l~tl~~a~~~~  103 (133)
T PF04238_consen   80 SHIILAIVALPLVLYTLYRALRGR  103 (133)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcC
Confidence            699999999999999999999864

>PF13172 PepSY_TM_1: PepSY-associated TM helix

Probab=91.67  E-value=0.33  Score=28.60  Aligned_cols=28  Identities=29%  Similarity=0.229  Sum_probs=25.0

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 030438           96 RSESLPWHVLFGLFVYILAVANAAIGFL  123 (177)
Q Consensus        96 r~~~~p~H~~~G~~~~~l~~~t~~lGl~  123 (177)
                      |+..+.+|++.|+.+.+..+.-+++|..
T Consensus         2 r~~~~~~H~~~g~~~~~~ll~~~lTG~~   29 (34)
T PF13172_consen    2 RKFWRKIHRWLGLIAAIFLLLLALTGAL   29 (34)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5677889999999999999999999985

>PF00033 Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; InterPro: IPR016174 This entry represents a haem-binding domain with a 4-helical bundle structure that is found in transmembrane di-haem cytochromes

Probab=91.25  E-value=2.7  Score=32.50  Aligned_cols=55  Identities=15%  Similarity=0.132  Sum_probs=40.5

Q ss_pred             HHHHHHHHHhhhhhhhhee---cCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030438           70 AVISLYGIQWLYGFVIFFY---PGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLE  124 (177)
Q Consensus        70 ~t~~L~~lQ~~~G~~~fl~---p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~e  124 (177)
                      +..+++.+|.+.|+..+.-   +......++..+-+|..+|.+..++.+.=...++.+
T Consensus        14 ~~al~~~~l~~tG~~~~~~~~~~~~~~~~~~~~~~~H~~~G~~~~~~~~~~~~~~~~~   71 (188)
T PF00033_consen   14 LNALLFILLLITGLYLMFPFWWLAGGFPGRQLLRWLHFSLGIVFLALFLLRILWRLFS   71 (188)
T ss_dssp             HHHHHHHHHHHHHHHHH-TTGGGGGTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHHHHHHHcccccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            4556777777788866522   222334456778899999999999999999999887

The domain contains four transmembrane helices in an up-and-down bundle, and binds two haem groups in between the helices; three of the four haem-binding residues is conserved between family members. Proteins containing this domain include: N-terminal domain of mitochondrial cytochrome b subunit, in which the domain contains an extra transmembrane linker helix that is absent in plant and cyanobacteria subunits []. Cytochrome b6 subunit of the cytochrome b6f complex, which provides the electronic connection between the photosystems I and II reaction centres of oxygenic photosynthesis, and generates a transmembrane electrochemical proton gradient for adenosine triphosphate synthesis []. Cytochrome gamma subunit of formate dehydrogenase-N (Fdn-N), which acts as a major component of Escherichia coli nitrate respiration []. ; GO: 0022904 respiratory electron transport chain, 0016020 membrane; PDB: 1KQG_C 1KQF_C.

>PF13706 PepSY_TM_3: PepSY-associated TM helix

Probab=90.41  E-value=0.49  Score=28.52  Aligned_cols=28  Identities=21%  Similarity=0.191  Sum_probs=25.1

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 030438           96 RSESLPWHVLFGLFVYILAVANAAIGFL  123 (177)
Q Consensus        96 r~~~~p~H~~~G~~~~~l~~~t~~lGl~  123 (177)
                      |+.+...|+|.|+.+-++-..-+.+|..
T Consensus         1 rr~~~~~H~W~Gl~~g~~l~~~~~tG~~   28 (37)
T PF13706_consen    1 RRILRKLHRWLGLILGLLLFVIFLTGAV   28 (37)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            5677889999999999999999999976

>cd08765 Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBRD1 gene product

Probab=88.47  E-value=11  Score=29.87  Aligned_cols=93  Identities=18%  Similarity=0.090  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcc--ccCCCCccchhhHHHHHHHHHHHHHhhhhhhhheecCCCCCcccchhhHHH
Q 030438           27 KVIHLVLHAIALILGIIGIYAAFKYHN--ESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHV  104 (177)
Q Consensus        27 k~iH~~l~~~a~~~~~iGl~av~~~~~--~~~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p~~~~~~r~~~~p~H~  104 (177)
                      -..|=.++.+++++...=...+|+.-.  ...++.-...|-++=++++++..    .|+..-+.-. .....+.+.-+|-
T Consensus        12 Fn~HPlLm~~Gfi~l~geAiL~yr~~~~~~~~k~~~k~iH~~L~~~a~~~~i----~Gl~avf~~h-n~~~~~~fySlHS   86 (153)
T cd08765          12 FNWHPVLMVIGFIFIQGIAIIVYRLPWTWKCSKLLMKLIHAGLHILAFILAI----ISVVAVFVFH-NAKNIPNMYSLHS   86 (153)
T ss_pred             eechHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHHHH----HHHHHHHHHc-cccCCCccccHHH
Confidence            358999999999984443444555221  12345567889888777766654    3554322212 2234567888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q 030438          105 LFGLFVYILAVANAAIGFLE  124 (177)
Q Consensus       105 ~~G~~~~~l~~~t~~lGl~e  124 (177)
                      |.|++++++-......|+..
T Consensus        87 wlGl~t~~l~~lQ~~~Gf~~  106 (153)
T cd08765          87 WVGLAAVILYPLQLVLGISV  106 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999964

Duodenal cytochrome b or ferric-chelate reductase 3, a cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. This protein is expressed at the brush border of duodenal enterocytes and may play a role in the uptake of dietary Fe(3+), facilitating its transport into the mucosal cells. It may also be involved in the recycling of extracellular ascorbate in erythrocyte membranes, and act as a ferrireductase in epithelial cells of the respiratory system. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-me

>COG3038 CybB Cytochrome B561 [Energy production and conversion]

Probab=87.42  E-value=7.3  Score=31.70  Aligned_cols=93  Identities=24%  Similarity=0.324  Sum_probs=65.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhhhhhhhheecCCCCC----cccchhh
Q 030438           26 KKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTG----LRSESLP  101 (177)
Q Consensus        26 ~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p~~~~~----~r~~~~p  101 (177)
                      ...+||..-.+-+.....|.......+.+..+-.++.+|=.+|++++.|..+-.+..+.. --|...++    .|..-+-
T Consensus        12 ~i~lHWl~allv~~~~~~g~~~~~~~~~~~~~~~~~~~Hks~Gi~vl~L~v~Rl~wrl~~-~~p~~~~~~~~~~~~aA~~   90 (181)
T COG3038          12 QIALHWLMALLVIGAFALGELMGFLPRGPGLYFLLYELHKSIGILVLALMVLRLLWRLRN-PAPPIVPGPPPWQRKAAKL   90 (181)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCCCCCCCChHHHHHHHH
Confidence            458999998888888888888888877665566899999999999999999998888833 23322111    1233334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Q 030438          102 WHVLFGLFVYILAVANAAIGFL  123 (177)
Q Consensus       102 ~H~~~G~~~~~l~~~t~~lGl~  123 (177)
                      .|    ..+|++-++-=++|+.
T Consensus        91 ~H----l~LY~l~lalPlsG~l  108 (181)
T COG3038          91 GH----LALYLLMLALPLSGYL  108 (181)
T ss_pred             HH----HHHHHHHHHHHHHHHH
Confidence            45    3456666666666643

>PF13703 PepSY_TM_2: PepSY-associated TM helix

Probab=85.37  E-value=4.7  Score=28.34  Aligned_cols=58  Identities=22%  Similarity=0.314  Sum_probs=31.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhh-hcc-------cc--CCCCccchhhHHHHHHHHHHHHHhhhhh
Q 030438           26 KKVIHLVLHAIALILGIIGIYAAFK-YHN-------ES--AIVNLYSLHSWLGIAVISLYGIQWLYGF   83 (177)
Q Consensus        26 ~k~iH~~l~~~a~~~~~iGl~av~~-~~~-------~~--~~~hf~SlHswlGl~t~~L~~lQ~~~G~   83 (177)
                      .+.+=...-.+.+++.+.|++.-.. ..+       +.  +....+.+|..+|+.+....++-.+.|.
T Consensus        16 G~~iv~~~al~~l~~~isGl~l~~p~~~~~~~~~r~~~~~~~r~~~dlH~~~G~~~~~~ll~~a~TG~   83 (88)
T PF13703_consen   16 GRWIVGILALLLLLLLISGLYLWWPRRWRWFFSLRPKRSKSKRRWFDLHRVLGLWFLPFLLVIALTGL   83 (88)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHhcCcccccccCCCCccChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4555566666666677777776642 111       00  1111455666666666666666666665

>COG3038 CybB Cytochrome B561 [Energy production and conversion]

Probab=85.35  E-value=9.2  Score=31.11  Aligned_cols=52  Identities=21%  Similarity=0.183  Sum_probs=41.2

Q ss_pred             HHHHHHHHhhhhhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 030438           71 VISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFL  123 (177)
Q Consensus        71 t~~L~~lQ~~~G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~  123 (177)
                      +..++..|++.|...-..|+ ....|.....+|.-+|+.++.+.+.=++..+.
T Consensus        19 ~allv~~~~~~g~~~~~~~~-~~~~~~~~~~~Hks~Gi~vl~L~v~Rl~wrl~   70 (181)
T COG3038          19 MALLVIGAFALGELMGFLPR-GPGLYFLLYELHKSIGILVLALMVLRLLWRLR   70 (181)
T ss_pred             HHHHHHHHHHHHHHHHHccc-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            44466777788887777776 44467778899999999999999999888875

>PF01292 Ni_hydr_CYTB: Prokaryotic cytochrome b561; InterPro: IPR011577 Cytochrome b561 is an integral membrane and electron transport protein, that binds two haem groups non-covalently

Probab=85.10  E-value=15  Score=28.23  Aligned_cols=51  Identities=20%  Similarity=0.229  Sum_probs=35.6

Q ss_pred             HHHHHHHHHhhhhhhhheecCCCCCcccc--hhhHHHHHHHHHHHHHHHHHHHH
Q 030438           70 AVISLYGIQWLYGFVIFFYPGGSTGLRSE--SLPWHVLFGLFVYILAVANAAIG  121 (177)
Q Consensus        70 ~t~~L~~lQ~~~G~~~fl~p~~~~~~r~~--~~p~H~~~G~~~~~l~~~t~~lG  121 (177)
                      +..+++..|.+.|+..+.-+. .......  .+.+|..+|.+...+.+.-....
T Consensus        12 ~~a~~~i~l~~tG~~~~~~~~-~~~~~~~~~~~~~H~~~G~~~~~~~~~~l~~~   64 (182)
T PF01292_consen   12 LNALSFIALIATGLWIHFPPP-GLYFGDFGGVRNWHVIAGLLLFALLIFRLLWR   64 (182)
T ss_pred             HHHHHHHHHHHHHHHHhcccc-cccccccchHHhHHHHHHHHHHHHHHHHHHHH
Confidence            355677888889996653322 2222222  47899999999999998888877

This domain is also found in a number of nickel-dependent hydrogenase subunits which are also B-type cytochromes that interact with quinones and anchor the hydrogenase to the membrane. Members of the 'eukaryotic cytochrome b561' family can be found in IPR004877 from INTERPRO.; GO: 0009055 electron carrier activity, 0016021 integral to membrane

>PLN02810 carbon-monoxide oxygenase

Probab=84.31  E-value=24  Score=29.84  Aligned_cols=113  Identities=19%  Similarity=0.096  Sum_probs=73.9

Q ss_pred             hhHhhhHHHhhcc-ccc---ccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHHHHHHHhhh
Q 030438            6 IIIGGEAIMSYKG-LNL---RKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLY   81 (177)
Q Consensus         6 v~l~~eaiL~~r~-~~~---~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~L~~lQ~~~   81 (177)
                      +.+..-..+-||- +.+   ++...-..|=.+..+++++.-.=-..+|+.-.. .+..-...|.++=.+++++-.+    
T Consensus        22 ~vlvl~W~~~~rgG~aw~~~~~~~~FN~HPvlMv~Gfi~l~geAIL~Yr~~~~-~k~~~K~iH~~lh~~Al~l~vv----   96 (231)
T PLN02810         22 AIMVLVWSIYYRGGLAWEATNKNLIFNLHPVLMLIGLIIIGGEAIMSYKSLPL-KKEVKKLIHLVLHAIALILGIF----   96 (231)
T ss_pred             HHHHHHHHHHcCCcccccCCCCCceeeehHHHHHHHHHHHhhHHHHHhhcccc-ccchHHHHHHHHHHHHHHHHHH----
Confidence            3444455556774 222   223345799999999998877766667764322 2345688899888777665443    


Q ss_pred             hhhhheecCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030438           82 GFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLE  124 (177)
Q Consensus        82 G~~~fl~p~~~~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~e  124 (177)
                      |+..-+-.. ..+..+-+.-+|-|.|+.+..+-...-..|+..
T Consensus        97 Gl~Avf~~H-n~~~i~nlySLHSWlGl~tv~Lf~lQw~~Gf~~  138 (231)
T PLN02810         97 GICAAFKNH-NESGIANLYSLHSWLGIGIISLYGIQWIYGFIV  138 (231)
T ss_pred             HHHHHHHhc-cccCCCceeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333321111 223346677899999999999999999999953

>PF11158 DUF2938: Protein of unknown function (DUF2938); InterPro: IPR021329 This bacterial family of proteins has no known function

Probab=82.26  E-value=2.6  Score=33.28  Aligned_cols=88  Identities=14%  Similarity=0.073  Sum_probs=54.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhHHHHHHHH--HHHHHhhhhhhhheecCCCCCcccchh--
Q 030438           25 VKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVIS--LYGIQWLYGFVIFFYPGGSTGLRSESL--  100 (177)
Q Consensus        25 ~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~hf~SlHswlGl~t~~--L~~lQ~~~G~~~fl~p~~~~~~r~~~~--  100 (177)
                      ..+.+=|..|-..-+....-+....... -...|.+.+- =..|++|+.  .+..|+.+|+ -+.-.+.|...+++++  
T Consensus        57 ~E~~~GW~~HY~iGi~fa~~~~~l~g~~-wl~~Pt~~~a-li~G~~tvl~p~~imqP~lG~-G~aas~tP~p~~~r~~sl  133 (150)
T PF11158_consen   57 GERILGWLAHYAIGIAFAVLYALLWGPG-WLSRPTLLPA-LIFGLVTVLAPFFIMQPALGA-GIAASKTPNPWKARLRSL  133 (150)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhc-cccCCchHHH-HHHHHHHHHHHHHHHHHHHhc-chhhccCCCchHHHHHHH
Confidence            3355667777665555555554444322 2234555443 247888777  8999999999 3344444555555554  


Q ss_pred             hHHHHHHHHHHHHHH
Q 030438          101 PWHVLFGLFVYILAV  115 (177)
Q Consensus       101 p~H~~~G~~~~~l~~  115 (177)
                      --|..+|..+|+-+.
T Consensus       134 ~aH~vfG~gLyl~~~  148 (150)
T PF11158_consen  134 IAHLVFGLGLYLSAL  148 (150)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            469999999998765

Some members are thought to be membrane proteins however this cannot be confirmed.

>PF13703 PepSY_TM_2: PepSY-associated TM helix

Probab=81.74  E-value=7.6  Score=27.26  Aligned_cols=25  Identities=20%  Similarity=0.373  Sum_probs=22.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHH
Q 030438           99 SLPWHVLFGLFVYILAVANAAIGFL  123 (177)
Q Consensus        99 ~~p~H~~~G~~~~~l~~~t~~lGl~  123 (177)
                      ...+|+..|..+......-+.+|..
T Consensus        60 ~~dlH~~~G~~~~~~ll~~a~TG~~   84 (88)
T PF13703_consen   60 WFDLHRVLGLWFLPFLLVIALTGLF   84 (88)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5669999999999999999999986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	177
4gd3_A	235	NI/Fe-hydrogenase 1 B-type cytochrome subunit; O2-	92.06
1kqf_C	217	FDH-N gamma, formate dehydrogenase, nitrate-induci	90.02

>4gd3_A NI/Fe-hydrogenase 1 B-type cytochrome subunit; O2-tolerant H2:quinone oxidoreductase, membrane-bound, NI-Fe hydrogenase-cytochrome B complex; HET: LMT HEM; 3.30A {Escherichia coli}

Probab=92.06  E-value=1.3  Score=35.40  Aligned_cols=63  Identities=14%  Similarity=0.209  Sum_probs=43.8

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCC--C-----ccchhhHHHHHHHHHHHHHhhhhhh
Q 030438           21 LRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIV--N-----LYSLHSWLGIAVISLYGIQWLYGFV   84 (177)
Q Consensus        21 ~~~~~~k~iH~~l~~~a~~~~~iGl~av~~~~~~~~~~--h-----f~SlHswlGl~t~~L~~lQ~~~G~~   84 (177)
                      .+...+ ..||.+=.+-+.+.+.|+..........+.+  +     ...+|-++|++.+.+..+-.+.++.
T Consensus        14 y~~~~R-~~HW~~a~~ii~l~~tG~~~~~~~~~~~g~~~~~~~~~~~~~~H~~~G~~~~~l~~~Rl~w~~~   83 (235)
T 4gd3_A           14 FEAPVR-IWHWLTVLCMAVLMVTGYFIGKPLPSVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFV   83 (235)
T ss_dssp             CCCCTT-HHHHHHHHHHHHHHHHHHHHHSCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cChHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444 7999888877788888887754322111211  1     2358999999999999998888885

>1kqf_C FDH-N gamma, formate dehydrogenase, nitrate-inducible, cytochr B556(FDN) subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: f.21.1.1 PDB: 1kqg_C*

Probab=90.02  E-value=2.2  Score=33.28  Aligned_cols=96  Identities=14%  Similarity=0.113  Sum_probs=60.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhcc----cc-CCCCccchhhHHHHHHHHHHHHHhhhhhhhheecCCCCC------
Q 030438           26 KKVIHLVLHAIALILGIIGIYAAFKYHN----ES-AIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTG------   94 (177)
Q Consensus        26 ~k~iH~~l~~~a~~~~~iGl~av~~~~~----~~-~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p~~~~~------   94 (177)
                      .+..||.+=..-+++.+.|+...+....    .. +......+|-++|.+.+.++..- +........|. +.+      
T Consensus        14 ~R~~HW~~a~~ii~l~~tG~~i~~p~~~~l~~~~g~~~~~~~~H~~~G~~~~~l~~~r-~~r~~r~~~p~-~~~~~~~~~   91 (217)
T 1kqf_C           14 DRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGTPQMGRILHPFFGIAIFVALMFM-FVRFVHHNIPD-KKDIPWLLN   91 (217)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCTTCGGGGGTTSSHHHHHHHHHHHHHHHHHHHHHH-HHHHGGGSCCC-GGGHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHchhHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCC-hhHHHHHHH
Confidence            3589999988888888889876532110    01 11236789999999988877653 22222333443 221      


Q ss_pred             -------------cccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 030438           95 -------------LRSESLPWHVLFGLFVYILAVANAAIGFL  123 (177)
Q Consensus        95 -------------~r~~~~p~H~~~G~~~~~l~~~t~~lGl~  123 (177)
                                   .....-|..+..=.+++++.++..++|+.
T Consensus        92 ~~~yl~~~~~~~p~~~~~n~~~~~~~~~l~~l~~~~~~TG~~  133 (217)
T 1kqf_C           92 IVEVLKGNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVI  133 (217)
T ss_dssp             HHHHHTTCHHHHCCCCSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence                         11224456666667778888888999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	177
d1kqfc_	216	Formate dehydrogenase N, cytochrome (gamma) subuni	87.75

>d1kqfc_ f.21.1.1 (C:) Formate dehydrogenase N, cytochrome (gamma) subunit {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Heme-binding four-helical bundle
superfamily: Transmembrane di-heme cytochromes
family: Formate dehydrogenase N, cytochrome (gamma) subunit
domain: Formate dehydrogenase N, cytochrome (gamma) subunit
species: Escherichia coli [TaxId: 562]

Probab=87.75  E-value=3.8  Score=29.87  Aligned_cols=136  Identities=10%  Similarity=0.010  Sum_probs=80.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhcccc-----CCCCccchhhHHHHHHHHHHHHHhhhhhhhheecCCC--------
Q 030438           26 KKVIHLVLHAIALILGIIGIYAAFKYHNES-----AIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGS--------   92 (177)
Q Consensus        26 ~k~iH~~l~~~a~~~~~iGl~av~~~~~~~-----~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~fl~p~~~--------   92 (177)
                      .+..||..-..-+++.+.|+...+..-...     .......+|-++|.+.+.....-....+.....+...        
T Consensus        13 ~Rl~HW~~a~~~i~L~~TGl~l~~~~~~~~~~~~~~~~~~~~~H~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   92 (216)
T d1kqfc_          13 DRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIV   92 (216)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCTTCGGGGGTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCCCGGGHHHHHSHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCcchhhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccchHHHHHHHH
Confidence            358999999999999999998865332211     1223456799998876665554444333222221111        


Q ss_pred             ---------CCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChhh----HHH-HHHHHHHHHHHHHh
Q 030438           93 ---------TGLRSESLPWHVLFGLFVYILAVANAAIGFLEKLTFLENSGLAKYGSEA----LLV-NFTAVITILYGAFV  158 (177)
Q Consensus        93 ---------~~~r~~~~p~H~~~G~~~~~l~~~t~~lGl~ek~~f~~~~~~~~~~~e~----~~~-n~~gl~~~~~~~~v  158 (177)
                               ......+-|..+......+++....+.+|+.-   +... .....+.+.    ... ...+.+++.+.++-
T Consensus        93 ~~~~~~~~~~~~~~~~n~~qkl~~~~~~~~~~~~~~TGl~l---~~~~-~~~~~~~~~~~~~~~iH~~~~~l~~~~vi~H  168 (216)
T d1kqfc_          93 EVLKGNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVII---WRPY-FAQYFPMQVVRYSLLIHAAAGIILIHAILIH  168 (216)
T ss_dssp             HHHTTCHHHHCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHT---CTTT-TGGGSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCccHHhhhHHHHHHHHHHHHHHHHHHHHHHHH---Hccc-hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence                     00112345678888888888888899999852   1100 001112221    122 26777778888888


Q ss_pred             hhhcccc
Q 030438          159 IFSVASQ  165 (177)
Q Consensus       159 ~~~~~~~  165 (177)
                      +|.++..
T Consensus       169 vy~a~~~  175 (216)
T d1kqfc_         169 MYMAFWV  175 (216)
T ss_dssp             HHHHHHB
T ss_pred             HHHHHcc
Confidence            8887654