Citrus Sinensis ID: 030462

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------
Protein Sequence
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQFIAIQKIYPLQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHccHHHcccccccEEEEEEEcccccccccccEEEEEEEcccccEEEEEcccccccccccccccccEEEEEcccccccEEEEEEEccccccccEEEEEccccccEEEEEccccccccEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHccccccccccccHHccccccHHHHHHHccccHHHHcccccEEEEEEEEccccccccccEEEEEEEcccccEEEEcccccccccccccccccEEEEEccccccEEEEEEEEEccccccccEEEEEccccccEEEEEccccccccEEEccccccccHHHcc
Coil and Loop (DISEMBL)
MVKLLLFLLIFATATIfshagssiispteiksfepktvQFIAIQKIYPLQLQVAAKSCSYTVIIKtscssksytrdKISLAFGDAYGNEVYIkrlddpysrtfescstdtfqisgpctydICYQYLLrsgsdgwkpesvkicgQNIRTVTFFyntfipdgvwfgfnqcrrgsgsavv
Flexible Loop (DISEMBL)
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQFIAIQKIYPLQLQVAAKSCSYTVIIKtscssksytrdKISLAFGDAYGNEVYIKRLDDPYSRTFESCStdtfqisgpcTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV
Low Complexity Region (SEG)
MVKlllfllifatatifSHAGSSIISPTEIKSFEPKTVQFIAIQKIYPLQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV
Disordered region (IsUnstruct)
**KLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQFIAIQKIYPLQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR********
Disordered Region (DISOPRED)
**KLLLFLLIFATATIFSHA*****************VQFIAIQ*I*******AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQC*********
Disordered Region (DISEMBL)
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQFIAIQKIYPLQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR********
Disordered Region (DISPRO)
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQFIAIQKIYPLQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRG******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQFIAIQKIYPLQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
255567021	167	conserved hypothetical protein [Ricinus	0.915	0.970	0.630	2e-56
224087146	168	predicted protein [Populus trichocarpa]	0.920	0.970	0.607	1e-52
224142627	167	predicted protein [Populus trichocarpa]	0.920	0.976	0.596	2e-52
3241945	365	unknown protein [Arabidopsis thaliana]	0.875	0.424	0.608	8e-51
186507192	179	Embryo-specific protein 3, (ATS3) [Arabi	0.881	0.871	0.604	6e-50
297827789	179	hypothetical protein ARALYDRAFT_483224 [	0.881	0.871	0.598	5e-49
224054426	166	predicted protein [Populus trichocarpa]	0.903	0.963	0.575	3e-48
255553155	163	conserved hypothetical protein [Ricinus	0.864	0.938	0.598	9e-48
388508934	166	unknown [Lotus japonicus]	0.881	0.939	0.556	3e-46
359490281	165	PREDICTED: uncharacterized protein LOC10	0.898	0.963	0.552	2e-45

>gi|255567021|ref|XP_002524493.1| conserved hypothetical protein [Ricinus communis] gi|223536281|gb|EEF37933.1| conserved hypothetical protein [Ricinus communis]

 Score =  223 bits (568), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 111/176 (63%), Positives = 129/176 (73%), Gaps = 14/176 (7%)

Query: 1   MVKLLLFLLIFATATIFSHAGSSIISPTE--IKSFEPKTVQFIAIQKIYPLQLQVAAKSC 58
           MVKLL FLLIF   +I S   +S+  P    + SF PK++Q               A+SC
Sbjct: 1   MVKLLSFLLIFVFFSIISPPATSVSPPQPHLLNSFPPKSIQ------------AANARSC 48

Query: 59  SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCT 118
           SYTV++KTSCSS SYTRDKISLAFGD+YGNEVY+KRLDDP S TF+ CS+DTFQISGPCT
Sbjct: 49  SYTVVVKTSCSSSSYTRDKISLAFGDSYGNEVYLKRLDDPSSGTFDRCSSDTFQISGPCT 108

Query: 119 YDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGS 174
           Y ICY YLLR GSDGWKPESVKI G N +T+ F YNTF+P+GVW+GFN CR  S S
Sbjct: 109 YGICYLYLLRRGSDGWKPESVKIYGPNTKTINFKYNTFLPNGVWYGFNLCRHASSS 164

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087146|ref|XP_002308084.1| predicted protein [Populus trichocarpa] gi|222854060|gb|EEE91607.1| predicted protein [Populus trichocarpa]

 Score =  210 bits (535), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 110/181 (60%), Positives = 129/181 (71%), Gaps = 18/181 (9%)

Query: 1   MVKLL-LFLLIFATATI-FSHAGSS--IISPTEIKSFEPKTVQFIAIQKIYPLQLQVAAK 56
           MVK + LF LIF  ++I FSHA S    + P   KSF PK +Q              AAK
Sbjct: 1   MVKQISLFWLIFVFSSITFSHARSLSLTLQPHAPKSFNPKNIQ--------------AAK 46

Query: 57  SCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP 116
           SC YT++IKTSC+S +YTRDKISLAFGD+YGNEVY+KRLDDP S TFE CSTDTFQI+GP
Sbjct: 47  SCPYTLVIKTSCTSTTYTRDKISLAFGDSYGNEVYMKRLDDPSSGTFERCSTDTFQINGP 106

Query: 117 CTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAV 176
           C YDICY Y+LR+G DGWKPESVKI G   +TV F YN F+P+GVW+GFN C R S S  
Sbjct: 107 CVYDICYLYMLRTGYDGWKPESVKIYGPYTKTVKFNYNKFLPNGVWYGFNVCVRASLSTA 166

Query: 177 V 177
           +
Sbjct: 167 I 167

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142627|ref|XP_002324656.1| predicted protein [Populus trichocarpa] gi|222866090|gb|EEF03221.1| predicted protein [Populus trichocarpa]

 Score =  210 bits (534), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 108/181 (59%), Positives = 131/181 (72%), Gaps = 18/181 (9%)

Query: 1   MVKLL-LFLLIFATATI-FSHAGS--SIISPTEIKSFEPKTVQFIAIQKIYPLQLQVAAK 56
           MVK L LF L+F  ++I F H+ S    + P  +KSF PK +Q              AAK
Sbjct: 1   MVKHLSLFGLVFVFSSITFPHSSSISPTLQPRPLKSFYPKNIQ--------------AAK 46

Query: 57  SCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP 116
           SC Y ++IKTSCSS +YTRDKISLAFGD+YGNEVYIKRLDDP S TFE CSTD+FQI+GP
Sbjct: 47  SCPYELVIKTSCSSTTYTRDKISLAFGDSYGNEVYIKRLDDPSSGTFERCSTDSFQINGP 106

Query: 117 CTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAV 176
           C  D+CY Y+LR+G+DGWKPESVKI G   +TVTF YN F+P+GVW+GFN C R S SA+
Sbjct: 107 CVDDVCYLYMLRTGADGWKPESVKIYGSYTKTVTFNYNKFLPNGVWYGFNVCGRASESAI 166

Query: 177 V 177
           +
Sbjct: 167 M 167

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3241945|gb|AAC23732.1| unknown protein [Arabidopsis thaliana]

 Score =  204 bits (520), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 104/171 (60%), Positives = 128/171 (74%), Gaps = 16/171 (9%)

Query: 1   MVKLLLFLLIFA--TATIFSHAGSSIIS-PTEIKSFEPKTVQFIAIQKIYPLQLQVAAKS 57
           M++L + L +FA  + T+FS A S I + P  I SF PK             +L+ AA +
Sbjct: 1   MLRLAIPLFLFALCSFTLFSSARSFITTKPLPIDSFIPKP------------KLENAA-A 47

Query: 58  CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPC 117
           CSYTVIIKTSCSS SYTRDKIS++FGD YGNEVY+KRLDDP SRTFE CS+DT++ISGPC
Sbjct: 48  CSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPC 107

Query: 118 TYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQC 168
             D+CY YLLR GSDGWKPE+VKI G +IR+VTF+YN F+P+ VW+GFN C
Sbjct: 108 MRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVC 158

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186507192|ref|NP_001118501.1| Embryo-specific protein 3, (ATS3) [Arabidopsis thaliana] gi|51968470|dbj|BAD42927.1| unknown protein [Arabidopsis thaliana] gi|51969372|dbj|BAD43378.1| unknown protein [Arabidopsis thaliana] gi|51969672|dbj|BAD43528.1| unknown protein [Arabidopsis thaliana] gi|62320996|dbj|BAD94040.1| hypothetical protein [Arabidopsis thaliana] gi|62321118|dbj|BAD94228.1| hypothetical protein [Arabidopsis thaliana] gi|110736474|dbj|BAF00205.1| hypothetical protein [Arabidopsis thaliana] gi|330254894|gb|AEC09988.1| Embryo-specific protein 3, (ATS3) [Arabidopsis thaliana]

 Score =  202 bits (513), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 104/172 (60%), Positives = 128/172 (74%), Gaps = 16/172 (9%)

Query: 1   MVKLLLFLLIFA--TATIFSHAGSSIIS-PTEIKSFEPKTVQFIAIQKIYPLQLQVAAKS 57
           M++L + L +FA  + T+FS A S I + P  I SF PK             +L+ AA +
Sbjct: 1   MLRLAIPLFLFALCSFTLFSSARSFITTKPLPIDSFIPKP------------KLENAA-A 47

Query: 58  CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPC 117
           CSYTVIIKTSCSS SYTRDKIS++FGD YGNEVY+KRLDDP SRTFE CS+DT++ISGPC
Sbjct: 48  CSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPC 107

Query: 118 TYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR 169
             D+CY YLLR GSDGWKPE+VKI G +IR+VTF+YN F+P+ VW+GFN C 
Sbjct: 108 MRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVCN 159

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297827789|ref|XP_002881777.1| hypothetical protein ARALYDRAFT_483224 [Arabidopsis lyrata subsp. lyrata] gi|297327616|gb|EFH58036.1| hypothetical protein ARALYDRAFT_483224 [Arabidopsis lyrata subsp. lyrata]

 Score =  199 bits (505), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 103/172 (59%), Positives = 125/172 (72%), Gaps = 16/172 (9%)

Query: 1   MVKLLLFLLIFA--TATIFSHAGSSIIS-PTEIKSFEPKTVQFIAIQKIYPLQLQVAAKS 57
           M++L + L +FA  + T FS A S I + P  I SF PK             +L+ A   
Sbjct: 1   MLRLAISLFLFALCSLTSFSSARSFITTKPLPIDSFLPKP------------KLENAGV- 47

Query: 58  CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPC 117
           CSYTVIIKTSCSS SYTRDKIS++FGD YGNEVY+KRLDDP SRTFE CS+DT++ISGPC
Sbjct: 48  CSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPC 107

Query: 118 TYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR 169
             D+CY YLLR GSDGWKPE+VKI G +IR+VTF+YN F+P+ VW+GFN C 
Sbjct: 108 MRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVCN 159

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054426|ref|XP_002298254.1| predicted protein [Populus trichocarpa] gi|222845512|gb|EEE83059.1| predicted protein [Populus trichocarpa]

 Score =  196 bits (498), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 99/172 (57%), Positives = 112/172 (65%), Gaps = 12/172 (6%)

Query: 4   LLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQFIAIQKIYPLQLQVAAKSCSYTVI 63
           L+ F L  A       A S I  P  + SF+  T             LQ  A SCSYTV 
Sbjct: 7   LVTFWLYLAVVFTPPQAKSKITQPQPLTSFKINTT------------LQNTASSCSYTVT 54

Query: 64  IKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICY 123
           I+TSCSS  YTRD+ISLAFGDAYG +VY+ RLDDP SRTFESCSTDTF I GPCTY ICY
Sbjct: 55  IRTSCSSSRYTRDRISLAFGDAYGYQVYVPRLDDPRSRTFESCSTDTFHIDGPCTYQICY 114

Query: 124 QYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSA 175
            YL R+G DGWKPES+ I G    +VTF+YNTFIP+ VW+GFN C   S SA
Sbjct: 115 VYLYRNGYDGWKPESITISGYYTSSVTFYYNTFIPNAVWYGFNHCNAASSSA 166

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553155|ref|XP_002517620.1| conserved hypothetical protein [Ricinus communis] gi|223543252|gb|EEF44784.1| conserved hypothetical protein [Ricinus communis]

 Score =  194 bits (494), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 100/167 (59%), Positives = 112/167 (67%), Gaps = 14/167 (8%)

Query: 3   KLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQFIAIQKIYPLQLQVAAKSCSYTV 62
           K + FLL  A     S+A S I  P  +KSF+    Q               A SCSYTV
Sbjct: 5   KAVTFLLFLALIVTLSNARSIIPLPQPLKSFKINATQ--------------NANSCSYTV 50

Query: 63  IIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDIC 122
            I TSCSS  YTRD+ISLAFGDAYGN+VY  RLDDPYS TFESCSTDTFQI GPCTY IC
Sbjct: 51  KITTSCSSTRYTRDQISLAFGDAYGNQVYAPRLDDPYSATFESCSTDTFQIKGPCTYQIC 110

Query: 123 YQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR 169
           Y YL RSG DGWKP++V + G   ++VTF YNTFIP+GVWFGFN C 
Sbjct: 111 YVYLYRSGYDGWKPKTVTVYGYYTKSVTFTYNTFIPNGVWFGFNYCN 157

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508934|gb|AFK42533.1| unknown [Lotus japonicus]

 Score =  189 bits (481), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 94/169 (55%), Positives = 114/169 (67%), Gaps = 13/169 (7%)

Query: 2   VKLLLFLLIFATATIFSHAGSSIISPTEI-KSFEPKTVQFIAIQKIYPLQLQVAAKSCSY 60
           +K L  +L F+  ++FS A   +  P +  +SF+P   Q                  CSY
Sbjct: 1   MKTLTLILTFSIISVFSQATLLLTDPPQPNESFKPNLTQ------------HQQNAGCSY 48

Query: 61  TVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYD 120
           TV I+TSCSS SYTRD+ISL+FGDAYG +VY+ RLDDP SRTFE CSTDTFQI+GPCTY 
Sbjct: 49  TVTIRTSCSSPSYTRDRISLSFGDAYGYQVYVPRLDDPSSRTFERCSTDTFQINGPCTYQ 108

Query: 121 ICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR 169
           ICY YL RSG DGW PESV + G N + VTF+YN FIP G+WFGF+ CR
Sbjct: 109 ICYLYLYRSGYDGWIPESVTVSGYNSQPVTFYYNAFIPAGIWFGFDYCR 157

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490281|ref|XP_003634058.1| PREDICTED: uncharacterized protein LOC100854618 [Vitis vinifera] gi|296084102|emb|CBI24490.3| unnamed protein product [Vitis vinifera]

 Score =  187 bits (474), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/172 (55%), Positives = 116/172 (67%), Gaps = 13/172 (7%)

Query: 2   VKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQFIAIQKIYPLQLQVAAKSCSYT 61
           +K + FLL  A+  IFS A S +  P  +KS       F +IQK+         ++CS+ 
Sbjct: 1   MKSVYFLLHLASIFIFSQAQSIVSHPHALKS-----QNFNSIQKV--------GRTCSFV 47

Query: 62  VIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDI 121
           VIIKTSCSS  +TRD+ISLAFGDAYGN++Y  R+DDP SR FE C +DTFQ+SG CTY I
Sbjct: 48  VIIKTSCSSIQFTRDQISLAFGDAYGNKIYAPRIDDPTSRRFERCVSDTFQLSGECTYQI 107

Query: 122 CYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSG 173
           C+    RSGSDGWKPESV I G N R VTF+Y  FIP G+WFGFN C + SG
Sbjct: 108 CHVAFYRSGSDGWKPESVTIYGFNSRPVTFYYKRFIPKGIWFGFNHCSKASG 159

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
TAIR|locus:4515102981	179	AT2G41475 "AT2G41475" [Arabido	0.774	0.765	0.652	2e-47
TAIR|locus:2167908	190	AT5G62200 "AT5G62200" [Arabido	0.717	0.668	0.606	5.2e-42
TAIR|locus:2167928	223	AT5G62210 "AT5G62210" [Arabido	0.638	0.506	0.469	1.2e-26
TAIR|locus:2182865	213	ATS3 "AT5G07190" [Arabidopsis	0.728	0.605	0.402	4.8e-23

TAIR|locus:4515102981 AT2G41475 "AT2G41475" [Arabidopsis thaliana (taxid:3702)]

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 90/138 (65%), Positives = 108/138 (78%)

Query:    37 TVQFIAIQKIYPLQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLD 96
             T + + I    P      A +CSYTVIIKTSCSS SYTRDKIS++FGD YGNEVY+KRLD
Sbjct:    27 TTKPLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLD 86

Query:    97 DPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTF 156
             DP SRTFE CS+DT++ISGPC  D+CY YLLR GSDGWKPE+VKI G +IR+VTF+YN F
Sbjct:    87 DPSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLF 146

Query:   157 IPDGVWFGFNQCRRGSGS 174
             +P+ VW+GFN C  G G+
Sbjct:   147 LPNSVWYGFNVCN-GIGN 163

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2167908 AT5G62200 "AT5G62200" [Arabidopsis thaliana (taxid:3702)]

 Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
 Identities = 77/127 (60%), Positives = 95/127 (74%)

Query:    51 LQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDT 110
             +Q    +C+YTVII TSCSS  YTRD+IS+AFGD YGN++Y  RLDDP ++TFE CS+DT
Sbjct:    41 IQKLGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDT 100

Query:   111 FQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRR 170
             FQI+GPCTY ICY YL RSG DGW P +VKI     + VTF YNT++P+ VW+GFN C  
Sbjct:   101 FQINGPCTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVPESVWYGFNYCNS 160

Query:   171 GSGSAVV 177
              S S V+
Sbjct:   161 ASDSNVL 167

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

TAIR|locus:2167928 AT5G62210 "AT5G62210" [Arabidopsis thaliana (taxid:3702)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 54/115 (46%), Positives = 77/115 (66%)

Query:    56 KSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRT--FESCSTDTFQI 113
             +SC YTVI+ TSC S  ++RD++++A GDA  N+V   RLD P S    FE CS+DTFQ+
Sbjct:    38 ESCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQV 97

Query:   114 SGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQC 168
              G C   IC  Y+ RSG+DGW PE+V+I  +  ++V F +N  +P+ +W+G N C
Sbjct:    98 KGKCLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYC 152

GO:0003674 "molecular_function" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0080167 "response to karrikin" evidence=IEP

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2182865 ATS3 "AT5G07190" [Arabidopsis thaliana (taxid:3702)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 54/134 (40%), Positives = 78/134 (58%)

Query:    40 FIAIQKIYPLQL-QVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDP 98
             FI +   + L + Q+   +C YTV++ TSC S   TRD+IS+ FGDA GN+VY  +L   
Sbjct:    15 FIFVTHAFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGL 74

Query:    99 YSRT--FESCSTDTFQISGPCTYD-ICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNT 155
                      CST+TFQ+ G C  D IC  Y+ R+G DGW PES++I  +  ++V F ++ 
Sbjct:    75 VRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSK 134

Query:   156 FIPD-GVWFGFNQC 168
              +P    W+G N C
Sbjct:   135 SVPQLNTWYGHNNC 148


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      177       163   0.00084  107 3  11 22  0.50    31
                                                     30  0.44    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  587 (62 KB)
  Total size of DFA:  157 KB (2094 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.48u 0.14s 16.62t   Elapsed:  00:00:01
  Total cpu time:  16.48u 0.14s 16.62t   Elapsed:  00:00:01
  Start:  Sat May 11 02:07:58 2013   End:  Sat May 11 02:07:59 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA;TAS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0016020 "membrane" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00060571 hypothetical protein (168 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	177
pfam06232	126	pfam06232, ATS3, Embryo-specific protein 3, (ATS3)	7e-63
cd00113	116	cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, A	2e-27
cd01754	129	cd01754, PLAT_plant_stress, PLAT/LH2 domain of pla	7e-04
pfam01477	115	pfam01477, PLAT, PLAT/LH2 domain	0.004

>gnl|CDD|218949 pfam06232, ATS3, Embryo-specific protein 3, (ATS3)

 Score =  189 bits (482), Expect = 7e-63
 Identities = 80/116 (68%), Positives = 94/116 (81%), Gaps = 1/116 (0%)

Query: 54  AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYS-RTFESCSTDTFQ 112
           A  SCSYTVIIKTSCSS +YT D+IS+AFGDAYGN+VY+ RLDDP S   FE C+TDTFQ
Sbjct: 11  AGSSCSYTVIIKTSCSSPAYTTDQISIAFGDAYGNQVYVPRLDDPSSGGGFERCTTDTFQ 70

Query: 113 ISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQC 168
           +SGPCTY ICY YL RSG+DGW PE+V I G     VTF++NTF+P+GVW+GFN C
Sbjct: 71  VSGPCTYPICYLYLYRSGTDGWIPETVTIYGYGYPPVTFYFNTFLPEGVWYGFNYC 126

Family of plant seed-specific proteins. Length = 126

>gnl|CDD|238061 cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain

 Score = 99.3 bits (248), Expect = 2e-27
 Identities = 46/118 (38%), Positives = 55/118 (46%), Gaps = 11/118 (9%)

Query: 58  CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP- 116
           C YTV IKT     + T   ISLA     GN   I  LD P   +FE  STDTFQI    
Sbjct: 1   CRYTVTIKTGDKKGAGTDSNISLALYGENGNSSDIPILDGP--GSFERGSTDTFQIDLKL 58

Query: 117 CTYDICYQYLLRSGS---DGWKPESVKICGQNIRT---VTFFYNTFIPDGVWFGFNQC 168
              DI   YL R GS   DGW  ES+ +  Q + T    TF  N ++  G W+   + 
Sbjct: 59  DIGDITKVYLRRDGSGLSDGWYCESITV--QALGTKKVYTFPVNRWVLGGKWYTSVRS 114

It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. Length = 116

>gnl|CDD|238852 cd01754, PLAT_plant_stress, PLAT/LH2 domain of plant-specific single domain protein family with unknown function

 Score = 37.5 bits (87), Expect = 7e-04
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 10/87 (11%)

Query: 58  CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDD------PYSRTFESCSTDTF 111
           C YT+ ++T    K+ T  +ISL   DA G  + I  L+            FE  + D F
Sbjct: 1   CVYTIYVQTGSIWKAGTDSRISLQIYDADGPGLRIANLEAWGGLMGAGHDYFERGNLDRF 60

Query: 112 QISGPC-TYDICYQYLLRSGSD---GW 134
              GPC     C+  L   G+    GW
Sbjct: 61  SGRGPCLPSPPCWMNLTSDGTGNHPGW 87

Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins. Length = 129

>gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain

 Score = 35.4 bits (82), Expect = 0.004
 Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 6/97 (6%)

Query: 60  YTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTY 119
           Y V +KT     + T   + ++    +G       L +P  +  +  STD+F        
Sbjct: 1   YQVKVKTGDELGAGTDANVYISLYGTHGKSGEYP-LLEPELKPDDRGSTDSFTFDTDEDL 59

Query: 120 -DICYQYLLR---SGSDGWKPESVKIC-GQNIRTVTF 151
            D+    +       SD W  +S+ +  G    T TF
Sbjct: 60  GDLGAIKIRWEINGHSDEWFLKSILVKSGPTGGTYTF 96

This domain is found in a variety of membrane or lipid associated proteins. It is called the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain. The known structure of pancreatic lipase shows this domain binds to procolipase pfam01114, which mediates membrane association. So it appears possible that this domain mediates membrane attachment via other protein binding partners. The structure of this domain is known for many members of the family and is composed of a beta sandwich. Length = 115

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	177
PF06232	125	ATS3: Embryo-specific protein 3, (ATS3); InterPro:	100.0
cd01754	129	PLAT_plant_stress PLAT/LH2 domain of plant-specifi	99.97
cd00113	116	PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin	99.95
cd01753	113	PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u	99.95
cd01756	120	PLAT_repeat PLAT/LH2 domain repeats of family of p	99.94
cd01752	120	PLAT_polycystin PLAT/LH2 domain of polycystin-1 li	99.94
cd02899	109	PLAT_SR Scavenger receptor protein. A subfamily of	99.92
smart00308	105	LH2 Lipoxygenase homology 2 (beta barrel) domain.	99.89
cd01757	114	PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter	99.86
PF01477	113	PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg	99.84
cd01755	120	PLAT_lipase PLAT/ LH2 domain present in connection	99.51
cd01758	137	PLAT_LPL PLAT/ LH2 domain present in lipoprotein l	99.21
cd01759	113	PLAT_PL PLAT/LH2 domain of pancreatic triglyceride	97.26
KOG2080	1295	consensus Uncharacterized conserved protein, conta	96.9
TIGR03230	442	lipo_lipase lipoprotein lipase. Members of this pr	96.06

>PF06232 ATS3: Embryo-specific protein 3, (ATS3); InterPro: IPR010417 This is a family of plant seed-specific proteins identified in Arabidopsis thaliana (Mouse-ear cress)

Probab=100.00  E-value=2.2e-48  Score=303.60  Aligned_cols=115  Identities=70%  Similarity=1.284  Sum_probs=112.7

Q ss_pred             cCCCceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCC-CCCcCCCceeeEeecCCCCCeeEEEEEEcCCC
Q 030462           54 AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYS-RTFESCSTDTFQISGPCTYDICYQYLLRSGSD  132 (177)
Q Consensus        54 ~~~~C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~-~~FErgs~DtF~v~g~Clg~Ic~l~L~rdG~d  132 (177)
                      +.++|+|+|+|||||+++|||+|+|||+|+|++||+|++++||+|.+ ++||||++|+|+|+|+|+++||+|+|+|+|+|
T Consensus        10 ~~~~CsYtv~IkTsC~s~a~T~d~Isi~FgDa~Gn~v~~~~Ld~p~~~~~FErCs~DtF~v~G~C~~~IC~lyL~r~G~d   89 (125)
T PF06232_consen   10 QAGSCSYTVTIKTSCSSPAGTDDQISIAFGDAYGNQVYVPRLDDPGSGDTFERCSTDTFQVTGPCLYQICYLYLYRSGSD   89 (125)
T ss_pred             cCCCCcEEEEEEeCcCCCcCCcceEEEEEecCCCCEEEEccCCCCCccCchhcCCcceeEeecccCCcccEEEEEEccCC
Confidence            57789999999999999999999999999999999999999999998 99999999999999999999999999999999


Q ss_pred             CceeeEEEEeccCCceEEEEeceecCCCCceeeecC
Q 030462          133 GWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQC  168 (177)
Q Consensus       133 gW~~e~V~V~~~~~~~~~F~~n~WL~~~~~yg~n~C  168 (177)
                      ||+||||+|++.+.++++|++|+|||+|+|||+|+|
T Consensus        90 GW~Pe~V~Iy~~~~~~~~F~~~~~lp~~vwyG~n~C  125 (125)
T PF06232_consen   90 GWKPEWVQIYGSGSKPVTFYFNTFLPNGVWYGFNYC  125 (125)
T ss_pred             CCEeCeEEEEEcCCCCeEEECCCcCCCCCcccccCC
Confidence            999999999999899999999999999999999999

ATS3 is expressed in a pattern similar to the Arabidopsis seed storage protein genes [].

>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function

Probab=99.97  E-value=8.4e-30  Score=199.67  Aligned_cols=106  Identities=26%  Similarity=0.438  Sum_probs=92.2

Q ss_pred             ceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccC------CCCCCCCcCCCceeeEeecCC-CCCeeEEEEEEcC
Q 030462           58 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLD------DPYSRTFESCSTDTFQISGPC-TYDICYQYLLRSG  130 (177)
Q Consensus        58 C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld------~p~~~~FErgs~DtF~v~g~C-lg~Ic~l~L~rdG  130 (177)
                      |.|+|+|+||++++|||||+|+|+|+|.+|++.....++      ++.++.||||++|+|.|..++ +|+||+|+||||+
T Consensus         1 ~~Y~I~V~TG~~~gAGTdanV~i~l~G~~G~s~~~~l~~~~~~l~~~~~~~FerG~~d~F~v~~~~~lG~l~~irI~HDn   80 (129)
T cd01754           1 CVYTIYVQTGSIWKAGTDSRISLQIYDADGPGLRIANLEAWGGLMGAGHDYFERGNLDRFSGRGPCLPSPPCWMNLTSDG   80 (129)
T ss_pred             CEEEEEEEECCCcccCCcceEEEEEEeCCCCcccEEcccccccccccccccccCCCccEEEEEeccCCCCeEEEEEEECC
Confidence            899999999999999999999999999999985544433      356889999999999998877 7999999999996


Q ss_pred             CC---CceeeEEEEecc-C---CceEEEEeceecCCC-Cce
Q 030462          131 SD---GWKPESVKICGQ-N---IRTVTFFYNTFIPDG-VWF  163 (177)
Q Consensus       131 ~d---gW~~e~V~V~~~-~---~~~~~F~~n~WL~~~-~~y  163 (177)
                      ++   +|||++|+|.+. .   ...++|+|||||+.| .+|
T Consensus        81 ~G~~p~W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d~~~~  121 (129)
T cd01754          81 TGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATDESPY  121 (129)
T ss_pred             CCCCCCcccCEEEEEeCCCCCcCcEEEEEecEeccCCCCcc
Confidence            53   999999999975 2   358999999999987 444

Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain

Probab=99.95  E-value=4.6e-27  Score=176.01  Aligned_cols=109  Identities=40%  Similarity=0.518  Sum_probs=96.7

Q ss_pred             ceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecC-CCCCeeEEEEEEcCCC---C
Q 030462           58 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP-CTYDICYQYLLRSGSD---G  133 (177)
Q Consensus        58 C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~-Clg~Ic~l~L~rdG~d---g  133 (177)
                      |.|+|+|+||+..+|||+++|+|.|+|++|++.....++++..  ||||++|+|.+..+ ++|+|+.|+|+||+.+   +
T Consensus         1 ~~Y~v~V~Tg~~~~agT~~~v~i~l~g~~g~s~~~~l~~~~~~--f~~g~~~~f~v~~~~~lG~i~~v~l~~d~~g~~~~   78 (116)
T cd00113           1 CRYTVTIKTGDKKGAGTDSNISLALYGENGNSSDIPILDGPGS--FERGSTDTFQIDLKLDIGDITKVYLRRDGSGLSDG   78 (116)
T ss_pred             CEEEEEEEECCCCCCCccCEEEEEEEeCCCCcccEEccCCCCc--ccCCCceEEEEeccCCCcCeEEEEEEECCCCCCCC
Confidence            7899999999999999999999999999999966554444333  99999999999887 6999999999999775   9


Q ss_pred             ceeeEEEEecc-CCceEEEEeceecCCCCceeeecC
Q 030462          134 WKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  168 (177)
Q Consensus       134 W~~e~V~V~~~-~~~~~~F~~n~WL~~~~~yg~n~C  168 (177)
                      |||++|+|++. +.+.+.|+|++||+.+.+|..++|
T Consensus        79 W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~r~  114 (116)
T cd00113          79 WYCESITVQALGTKKVYTFPVNRWVLGGKWYTSVRS  114 (116)
T ss_pred             EEEeEEEEEeCCCCCEEEEEeCCCcccCCCCCceee
Confidence            99999999976 568899999999999988887765

It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.

>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase

Probab=99.95  E-value=5.4e-27  Score=178.86  Aligned_cols=101  Identities=22%  Similarity=0.240  Sum_probs=91.9

Q ss_pred             eEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecC-CCCCeeEEEEEEcCC---CCc
Q 030462           59 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP-CTYDICYQYLLRSGS---DGW  134 (177)
Q Consensus        59 ~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~-Clg~Ic~l~L~rdG~---dgW  134 (177)
                      .|+|+|+||.+..|||+|+|+|.|.|++|++ ....|+++..+ ||||++|+|.+..+ ++|+|++|+||||++   ++|
T Consensus         2 ~Y~V~V~Tg~~~~AGT~a~V~i~l~G~~g~S-~~~~L~~~~~~-FerG~~d~F~v~~~~~lG~l~~i~i~~d~~g~~~~W   79 (113)
T cd01753           2 EYKVTVATGSSLFAGTDDYIYLTLVGTAGES-EKQLLDRPGYD-FERGAVDEYKVKVPEDLGELLLVRLRKRKYLLFDAW   79 (113)
T ss_pred             EEEEEEEECCCcCCccccEEEEEEEECCCcc-cCEEcCCCCCc-cCCCCeeEEEEecccCCCCcEEEEEEECCCCCCCCe
Confidence            6999999999999999999999999999987 67788887654 99999999999865 599999999999964   399


Q ss_pred             eeeEEEEeccCCceEEEEeceecCCCC
Q 030462          135 KPESVKICGQNIRTVTFFYNTFIPDGV  161 (177)
Q Consensus       135 ~~e~V~V~~~~~~~~~F~~n~WL~~~~  161 (177)
                      ||++|+|.++.++.+.|+|||||+.+.
T Consensus        80 ~l~~V~V~~~~~~~~~F~c~rWl~~~~  106 (113)
T cd01753          80 FCNYITVTGPGGDEYHFPCYRWIEGYG  106 (113)
T ss_pred             eecEEEEEcCCCCEEEEEhHHeECCCC
Confidence            999999998878889999999999874

As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.

>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function

Probab=99.94  E-value=4.6e-26  Score=174.03  Aligned_cols=103  Identities=19%  Similarity=0.220  Sum_probs=94.4

Q ss_pred             eEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCC-CCCCCcCCCceeeEeecCCCCCeeEEEEEEcCC---CCc
Q 030462           59 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDP-YSRTFESCSTDTFQISGPCTYDICYQYLLRSGS---DGW  134 (177)
Q Consensus        59 ~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p-~~~~FErgs~DtF~v~g~Clg~Ic~l~L~rdG~---dgW  134 (177)
                      .|+|+|+||...+|||+++|+|.|+|..|++ ....|+++ ..+.||||++|+|.+....+|+|++|+||||+.   ++|
T Consensus         2 ~Y~v~v~TG~~~~AGT~a~V~i~L~G~~g~s-~~~~L~~~~~~~~FerGs~d~F~i~~~~lG~l~~i~i~~d~~g~~~~W   80 (120)
T cd01756           2 TYEVTVKTGDVKGAGTDANVFITLYGENGDT-GKRKLKKSNNKNKFERGQTDKFTVEAVDLGKLKKIRIGHDNSGLGAGW   80 (120)
T ss_pred             EEEEEEEECCCcCCCCCcEEEEEEEeCCCcc-ccEEccCCCcCCcccCCCeEEEEEEecCCCCeEEEEEEECCCCCCCCc
Confidence            6999999999999999999999999999987 77789887 788999999999999888899999999999965   499


Q ss_pred             eeeEEEEecc-CCceEEEEeceecCCCCc
Q 030462          135 KPESVKICGQ-NIRTVTFFYNTFIPDGVW  162 (177)
Q Consensus       135 ~~e~V~V~~~-~~~~~~F~~n~WL~~~~~  162 (177)
                      ||++|+|.+. +++.+.|+||+||+.+..
T Consensus        81 ~~~~V~V~~~~~~~~~~F~~~~Wl~~~~~  109 (120)
T cd01756          81 FLDKVEIREPGTGDEYTFPCNRWLDKDED  109 (120)
T ss_pred             EEeEEEEEECCCceEEEEEeCCccCCCCC
Confidence            9999999976 578899999999998743

In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins

Probab=99.94  E-value=6.3e-26  Score=173.48  Aligned_cols=103  Identities=21%  Similarity=0.252  Sum_probs=93.6

Q ss_pred             ceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecC-CCCCeeEEEEEEcCC---CC
Q 030462           58 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP-CTYDICYQYLLRSGS---DG  133 (177)
Q Consensus        58 C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~-Clg~Ic~l~L~rdG~---dg  133 (177)
                      ..|+|+|+||...+|||+++|+|.|+|.+|++ ....|.++.++.||||++|+|.+..+ .+|+|+.|+||||++   ++
T Consensus         1 ~~Y~v~v~Tg~~~gAGT~a~V~i~L~G~~g~s-~~~~L~~~~~~~F~rG~~~~f~i~~~~dlG~l~~i~l~hd~~g~~~~   79 (120)
T cd01752           1 YLYLVTVFTGWRRGAGTTAKVTITLYGAEGES-EPHHLRDPEKPIFERGSVDSFLLTTPFPLGELQSIRLWHDNSGLSPS   79 (120)
T ss_pred             CEEEEEEEECCCCCCCcccEEEEEEEeCCCCc-ccEEcCCCCccceeCCCeeEEEecCccCCCCccEEEEEECCCCCCCC
Confidence            36999999999999999999999999999987 66788888889999999999999865 599999999999965   39


Q ss_pred             ceeeEEEEecc-CCceEEEEeceecCCCC
Q 030462          134 WKPESVKICGQ-NIRTVTFFYNTFIPDGV  161 (177)
Q Consensus       134 W~~e~V~V~~~-~~~~~~F~~n~WL~~~~  161 (177)
                      |||++|+|.+. +++.+.|+|++||+.+.
T Consensus        80 W~l~~V~V~~~~t~~~~~F~~~rWl~~~~  108 (120)
T cd01752          80 WYLSRVIVRDLQTGKKWFFLCNDWLSVEE  108 (120)
T ss_pred             eEEEEEEEEECCCCcEEEEEeCcEECCcC
Confidence            99999999976 57889999999999763

Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.

>cd02899 PLAT_SR Scavenger receptor protein

Probab=99.92  E-value=9.3e-25  Score=166.95  Aligned_cols=97  Identities=20%  Similarity=0.225  Sum_probs=88.7

Q ss_pred             eEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecCCCCCeeEEEEEEcCC-CCceee
Q 030462           59 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS-DGWKPE  137 (177)
Q Consensus        59 ~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~Clg~Ic~l~L~rdG~-dgW~~e  137 (177)
                      .|+|+|+||...+|||+++|+|.|.|..|.+ ....|++    .||||++|+|.+++.+||+|..|+|.++|. ++|||+
T Consensus         2 ~Y~I~V~TG~~~~AGT~~~V~i~L~G~~g~S-~~~~L~~----~F~~G~~d~F~v~~~dLG~l~~i~l~n~g~~~~Wf~~   76 (109)
T cd02899           2 TYTASVQTGKDKEAGTNGTIEITLLGSSGRS-NPKTLSQ----GFYPGSLKRIRFRAADVGDINAIILSNTALNDPWYCD   76 (109)
T ss_pred             eEEEEEEECCCCCCCccceEEEEEEECCCCc-CCEEccC----ccCCCceEEEEECccccCceEEEEEECCCCCCCceee
Confidence            5999999999999999999999999999987 5566764    599999999999988899999999988886 499999


Q ss_pred             EEEEeccCCceEEEEeceecCCC
Q 030462          138 SVKICGQNIRTVTFFYNTFIPDG  160 (177)
Q Consensus       138 ~V~V~~~~~~~~~F~~n~WL~~~  160 (177)
                      +|+|.++.++.+.|+|||||+..
T Consensus        77 ~V~V~~~~g~~~~Fpc~rWla~~   99 (109)
T cd02899          77 YVRIKSEDGKVFAFNVKRWIGYP   99 (109)
T ss_pred             EEEEECCCCCEEEEEcceeeCCc
Confidence            99999987788999999999974

A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.

>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain

Probab=99.89  E-value=1.4e-22  Score=149.52  Aligned_cols=100  Identities=18%  Similarity=0.160  Sum_probs=86.8

Q ss_pred             eEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecC-CCCCeeEEEEEEcC-CCCcee
Q 030462           59 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP-CTYDICYQYLLRSG-SDGWKP  136 (177)
Q Consensus        59 ~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~-Clg~Ic~l~L~rdG-~dgW~~  136 (177)
                      .|+|+|+||.+..|||+++|+|.|.|..|++ ....+....+..||||++|+|.+..+ .+|+|..|+|+||+ .++|||
T Consensus         2 ~Y~v~V~Tg~~~~aGT~~~V~l~L~g~~~~s-~~~~~~~~~~~~f~~g~~~~f~v~~~~~lG~l~~v~v~~d~~~~~w~l   80 (105)
T smart00308        2 KYKVTVTTGGLDFAGTTASVSLSLVGAEGDG-KESKLDYLFKGIFARGSTYEFTFDVDEDFGELGAVKIKNEHRHPEWFL   80 (105)
T ss_pred             EEEEEEEECCccCCCccceEEEEEEeCCCCC-cceeccccCCccccCCceEEEEEecccCCCCcEEEEEEeCCCCCCeEE
Confidence            6999999999999999999999999999763 33444443445699999999999876 49999999999998 679999


Q ss_pred             eEEEEecc-CCceEEEEeceecCC
Q 030462          137 ESVKICGQ-NIRTVTFFYNTFIPD  159 (177)
Q Consensus       137 e~V~V~~~-~~~~~~F~~n~WL~~  159 (177)
                      ++|+|.+. +.+.+.|+||+||..
T Consensus        81 ~~V~V~~~~~~~~~~F~c~~Wl~~  104 (105)
T smart00308       81 KSITVKDLPTGGKYHFPCNSWVYP  104 (105)
T ss_pred             EEEEEEECCCCCEEEEEcCceeCC
Confidence            99999975 678999999999975

>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family

Probab=99.86  E-value=3.5e-21  Score=148.37  Aligned_cols=95  Identities=15%  Similarity=0.122  Sum_probs=81.8

Q ss_pred             eEEEEEEcCCC-CCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecCCCCCeeEEEEEEcCC---CCc
Q 030462           59 SYTVIIKTSCS-SKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS---DGW  134 (177)
Q Consensus        59 ~YtVtIkTG~~-~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~Clg~Ic~l~L~rdG~---dgW  134 (177)
                      .|.|+|+||.. ++|||+|+|+|.|+|..|++ ....|+++   .|      .|.+....||++.+|+||||.+   ++|
T Consensus         2 ~Y~VtV~TG~~~~gAGT~anV~i~L~G~~g~s-~~~~L~~~---~f------~~~v~~~~LG~L~~irIwHDnsG~~~~W   71 (114)
T cd01757           2 PYHVVIVPSKKLGGSMFTANPWICVSGELGET-PPLQIPKN---SL------EMTFDCQNLGKLTTVQIGHDNSGLLAKW   71 (114)
T ss_pred             eEEEEEEeCCCCCCCCCcceEEEEEEEcCCCc-CCEEecCC---ce------EEEEecCCcCCcEEEEEEECCCCCCCCe
Confidence            69999999999 59999999999999999976 77788643   33      4777678899999999999954   499


Q ss_pred             eeeEEEEec-cCCceEEEEeceecCCCCce
Q 030462          135 KPESVKICG-QNIRTVTFFYNTFIPDGVWF  163 (177)
Q Consensus       135 ~~e~V~V~~-~~~~~~~F~~n~WL~~~~~y  163 (177)
                      ||++|+|.+ .+++.+.|+|||||+.+..-
T Consensus        72 fl~~V~V~d~~t~~~~~FpC~rWLa~~~~D  101 (114)
T cd01757          72 LVEYVMVRNEITGHTYKFPCGRWLGEGVDD  101 (114)
T ss_pred             eeeEEEEEeCCCCCEEEEecCceecCCCCc
Confidence            999999998 57888999999999987543

PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.

>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1

Probab=99.84  E-value=5.6e-21  Score=140.82  Aligned_cols=101  Identities=28%  Similarity=0.303  Sum_probs=85.9

Q ss_pred             EEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeec-CCCCCeeEEEEEEcCC---CCce
Q 030462           60 YTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSGS---DGWK  135 (177)
Q Consensus        60 YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g-~Clg~Ic~l~L~rdG~---dgW~  135 (177)
                      |+|+|+||....|||+++|+|.|+|.+|++... .|.++....+  |++|+|.+.. ..+|+|..|+|+|++.   ++|+
T Consensus         1 Y~v~v~Tg~~~~aGT~~~V~i~l~G~~g~s~~~-~l~~~~~~~~--g~~d~F~i~~~~~lG~i~~i~i~~~~~~~~~~W~   77 (113)
T PF01477_consen    1 YRVTVKTGDERGAGTDANVYITLYGSKGKSGEI-ELLDPSGFNF--GSTDTFTIETPEDLGEIQKIRIWHDGSGPSPSWY   77 (113)
T ss_dssp             EEEEEEEESSTEEEESSEEEEEEEETTEEEEEE-EEEEEEETST--TEEEEEEEEESSCGCSEEEEEEEEESSSSSSEEE
T ss_pred             CEEEEEECCCCCCCcCCeEEEEEEECCCCcceE-EEeeeeeccc--CceEEeeeeecccCCCCcEEEEEEccCCCccceE
Confidence            999999999999999999999999999998444 4444333333  9999999977 5699999999999954   4999


Q ss_pred             eeEEEEecc-CCceEEEEeceecCCCCce
Q 030462          136 PESVKICGQ-NIRTVTFFYNTFIPDGVWF  163 (177)
Q Consensus       136 ~e~V~V~~~-~~~~~~F~~n~WL~~~~~y  163 (177)
                      |++|+|... .+..+.|+||+||..+..|
T Consensus        78 l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~  106 (113)
T PF01477_consen   78 LDSVVVTDGETGRTYTFPCNRWLDPDKDY  106 (113)
T ss_dssp             EEEEEEEETTTSEEEEEEEEEEESTTEGC
T ss_pred             EEEEEEEeCCCCcEEEEEcCCEECCCCCC
Confidence            999999974 7799999999999987533

13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....

>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain

Probab=99.51  E-value=2.1e-13  Score=104.92  Aligned_cols=90  Identities=11%  Similarity=0.076  Sum_probs=77.4

Q ss_pred             ceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEe-ecCCCCCeeEEEEEEcCC-----
Q 030462           58 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQI-SGPCTYDICYQYLLRSGS-----  131 (177)
Q Consensus        58 C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v-~g~Clg~Ic~l~L~rdG~-----  131 (177)
                      +.|.|+|.||....|||+++|+|+|+|..|++ ....|.++   .||+|++|+|.+ +..++|++.+|++|+|..     
T Consensus         1 ~hY~vtV~~~~~~~agt~~~v~v~L~G~~g~s-~~~~l~~~---~~~~g~~~sfli~t~~~lG~l~~v~~~~dn~~~~~~   76 (120)
T cd01755           1 WHYQVKVHLSGKKNLEVDGTFTVSLYGTKGET-EQLPIVLG---ELKPNKTYSFLIDTEVDIGDLLKVKFKWENNVINSN   76 (120)
T ss_pred             CEEEEEEEEeCccccCcCccEEEEEEcCCCCc-ccEEEeCC---cccCCCEEEEEEEcCCCccceEEEEEEEcCCCcccc
Confidence            57999999999999999999999999999998 66667553   489999999999 678899999999999943     


Q ss_pred             -----CCceeeEEEEecc-CCceEEE
Q 030462          132 -----DGWKPESVKICGQ-NIRTVTF  151 (177)
Q Consensus       132 -----dgW~~e~V~V~~~-~~~~~~F  151 (177)
                           .+|++++|.|.+. +.+...|
T Consensus        77 ~~~~~p~~~~~~I~Vq~get~~~~~F  102 (120)
T cd01755          77 SGETLPKLGARKIRVKSGETQKKFTF  102 (120)
T ss_pred             cccCCCcEEEEEEEEEECCCCCEEEE
Confidence                 2899999999965 5555555

This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01758 PLAT_LPL PLAT/ LH2 domain present in lipoprotein lipase (LPL)

Probab=99.21  E-value=1.9e-10  Score=91.17  Aligned_cols=75  Identities=17%  Similarity=0.209  Sum_probs=64.5

Q ss_pred             ceEEEEEEcCCCCCCC-CCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEe-ecCCCCCeeEEEE-EEcCC--C
Q 030462           58 CSYTVIIKTSCSSKSY-TRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQI-SGPCTYDICYQYL-LRSGS--D  132 (177)
Q Consensus        58 C~YtVtIkTG~~~~AG-Tda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v-~g~Clg~Ic~l~L-~rdG~--d  132 (177)
                      +.|.|+|.|+....|| |+++|+|+|+|.+|++ ....|.++  +.+|+|++++|.+ +..++|++.+|++ |||..  .
T Consensus         1 yhYqVtV~~~~~~~~~~t~~~v~i~L~G~~g~S-~~~~l~~~--~~~~~G~t~sfLi~t~~dlG~L~~vk~~W~~n~~~~   77 (137)
T cd01758           1 FHYQLKIHFFNQTNRIETDPTFTISLYGTLGES-ENLPLTLP--EGITGNKTNSFLITTEKDIGDLLMLKLKWEGSSLWS   77 (137)
T ss_pred             CeEEEEEEEecccCCCcccceEEEEEEcCCCcc-cCEEEecC--cccCCCCeEEEEEECCCCcCCEEEEEEEEeCCCCCC
Confidence            5899999999999998 9999999999999998 66667554  3569999999999 6788999999999 98843  2


Q ss_pred             -Cce
Q 030462          133 -GWK  135 (177)
Q Consensus       133 -gW~  135 (177)
                       .|+
T Consensus        78 ~sW~   81 (137)
T cd01758          78 NSWW   81 (137)
T ss_pred             hhhh
Confidence             764

LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs) and has therefeore has a profound influence on triglyceride and high-density lipoprotein (HDL) cholesterol levels in the blood. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01759 PLAT_PL PLAT/LH2 domain of pancreatic triglyceride lipase

Probab=97.26  E-value=0.0047  Score=47.72  Aligned_cols=87  Identities=14%  Similarity=0.099  Sum_probs=66.5

Q ss_pred             eEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEe-ecCCCCCeeEEEEEEcCCC-C--c
Q 030462           59 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQI-SGPCTYDICYQYLLRSGSD-G--W  134 (177)
Q Consensus        59 ~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v-~g~Clg~Ic~l~L~rdG~d-g--W  134 (177)
                      +|.|+|.-+....  ++..+.|+|+|..|++ .-..+.   .+.||.|++-+|.+ +...+|++-.|.++.++.- +  |
T Consensus         2 ~Yqv~V~~s~~~~--~~g~~~vsL~G~~g~s-~~~~i~---~g~l~pg~tys~li~~d~dvG~l~~Vkf~W~~~~~n~~~   75 (113)
T cd01759           2 RYKVSVTLSGKKK--VTGTILVSLYGNKGNT-RQYEIF---KGTLKPGNTYSAFIDVDVDVGPLTKVKFIWNNNVINITL   75 (113)
T ss_pred             eEEEEEEEecccc--cCceEEEEEEcCCCCc-cceEEE---eeeecCCCEEEEEEEccCCCCCEEEEEEEEeCCccCCCC
Confidence            6999998877654  8899999999999997 333342   34699999999999 6778999999999998751 2  2


Q ss_pred             ---eeeEEEEecc-CCceEEE
Q 030462          135 ---KPESVKICGQ-NIRTVTF  151 (177)
Q Consensus       135 ---~~e~V~V~~~-~~~~~~F  151 (177)
                         +.++|.|... +.+.+.|
T Consensus        76 p~~~~~~I~Vq~Ge~~~~~~F   96 (113)
T cd01759          76 PKVGAEKITVQSGKDGKVFNF   96 (113)
T ss_pred             CeEEEEEEEEEeCCCccEEEE
Confidence               2678888855 4444444

Lipases hydrolyze phospholipids and triglycerides to generate fatty acids for energy production or for storage and to release inositol phosphates that act as second messengers. The central role of triglyceride lipases is in energy production. The proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.

>KOG2080 consensus Uncharacterized conserved protein, contains DENN and RUN domains [Signal transduction mechanisms]

Probab=96.90  E-value=0.0014  Score=65.44  Aligned_cols=92  Identities=18%  Similarity=0.156  Sum_probs=73.1

Q ss_pred             CceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecCCCCCeeEEEEEEcCCC---C
Q 030462           57 SCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSD---G  133 (177)
Q Consensus        57 ~C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~Clg~Ic~l~L~rdG~d---g  133 (177)
                      .-.|.|.|.||  ++.|+.++|-|..-|.-+.. ...-|. |+        +=-|...-.-||-+.-|+|=||.++   -
T Consensus       973 k~~Y~vvIv~~--~g~~~~~~iWi~vsGsl~eT-~~i~~~-~n--------~~~f~F~~kNLG~LtT~rIGHdnS~~~~k 1040 (1295)
T KOG2080|consen  973 KMDYQVVIVTG--SGRGAIPAIWVTVEGSLCST-PPIMLK-PN--------TPLFKFDHKNLGILSTLRIGHQQSEKPVQ 1040 (1295)
T ss_pred             ccceEEEEEeC--CCCcccCceEEEEecccCCC-CceeeC-CC--------CceeEEeccccceeeeEEecccCCCcchH
Confidence            45799999999  88999999999999999775 333332 22        2234444445899999999999654   9


Q ss_pred             ceeeEEEEecc-CCceEEEEeceecCCC
Q 030462          134 WKPESVKICGQ-NIRTVTFFYNTFIPDG  160 (177)
Q Consensus       134 W~~e~V~V~~~-~~~~~~F~~n~WL~~~  160 (177)
                      |++|+|.|.+. ++.++.|||.+|+.++
T Consensus      1041 W~vEyV~vRNEiTG~TYKFPCGrw~G~g 1068 (1295)
T KOG2080|consen 1041 WFLEYVLVRNEITGQTYKFPCGRWFGNG 1068 (1295)
T ss_pred             HHHHHhhhhceeccceeccccccccCCc
Confidence            99999999875 8889999999999986

>TIGR03230 lipo_lipase lipoprotein lipase

Probab=96.06  E-value=0.062  Score=50.13  Aligned_cols=91  Identities=14%  Similarity=0.153  Sum_probs=70.2

Q ss_pred             CceEEEEEEcCCCCC-CCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEe-ecCCCCCeeEEEEEEcCCC--
Q 030462           57 SCSYTVIIKTSCSSK-SYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQI-SGPCTYDICYQYLLRSGSD--  132 (177)
Q Consensus        57 ~C~YtVtIkTG~~~~-AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v-~g~Clg~Ic~l~L~rdG~d--  132 (177)
                      ...|.|+|..+.... .+++..+.|+|++..|++-. ..+.   ...+|.|++-+|.| +...+|++..|.++.++..  
T Consensus       308 ~~~y~v~v~~~~~~~~~~~~~~~~~~l~g~~~~~~~-~~~~---~~~~~~~~t~~~~i~~~~~~g~~~~v~~~w~~~~~~  383 (442)
T TIGR03230       308 VFHYQVKVHFFGKTSLSHTDQPMKISLYGTHGEKEN-IPFT---LPEVSTNKTYSFLITTDVDIGELLMVKLKWEKDTYI  383 (442)
T ss_pred             EEEEEEEEEEeccccccccCCcEEEEEEcCCCCccc-eEEe---eeeecCCCeEEEEEecccCCCceEEEEEEEeCCCcc
Confidence            456899999887654 47899999999999999722 2232   34699999999999 5777999999999999764  


Q ss_pred             Cce---------eeEEEEecc-CCceEEE
Q 030462          133 GWK---------PESVKICGQ-NIRTVTF  151 (177)
Q Consensus       133 gW~---------~e~V~V~~~-~~~~~~F  151 (177)
                      .|.         .++|+|... +.+.+.|
T Consensus       384 ~~~~~~~~~~~~~~~i~v~~ge~~~~~~f  412 (442)
T TIGR03230       384 SWSDWWSSPGFHIRKLRIKSGETQSKVIF  412 (442)
T ss_pred             cchhhhcCCceeEEEEEEEeCCCccEEEE
Confidence            776         678888855 4444444

Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	177
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	2e-08
3fg1_A	696	Allene oxide synthase-lipoxygenase protein; arichi	1e-04
1olp_A	370	Alpha-toxin; zinc phospholipase C, GAS gangrene de	2e-04
2wxu_A	370	Phospholipase C; cytolysis, hydrolase, hemolysis,	2e-04

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698

 Score = 51.9 bits (123), Expect = 2e-08
 Identities = 24/123 (19%), Positives = 39/123 (31%), Gaps = 8/123 (6%)

Query: 56  KSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG 115
               Y + ++T     + T   +S+      G E     LD  +   FES  TDT+  SG
Sbjct: 18  HHMKYKITVETGDLRGAGTDASVSIKLTGKDGAETSAFSLDKYFHNDFESGGTDTYDQSG 77

Query: 116 PCTYDICYQYLLRSG---SDGWKPESVKICGQNIRTVT-----FFYNTFIPDGVWFGFNQ 167
               +I    L  +G      W    V I   +  T       F    ++   +     +
Sbjct: 78  VDVGEIAMITLKENGFGLKSDWYIAKVIIEKIDEATGFSNKYIFPCYRWVIKQLVVYEGK 137

Query: 168 CRR 170
              
Sbjct: 138 AIL 140

>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696

 Score = 41.0 bits (95), Expect = 1e-04
 Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 11/117 (9%)

Query: 60  YTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTY 119
           Y V ++T     + T   I++    A G      +LD     +FE+ S + + + G    
Sbjct: 9   YNVEVETGDREHAGTDATITIRITGAKG-RTDYLKLDKG---SFEAGSKEQYTVQGFDVG 64

Query: 120 DICY------QYLLRSGSDGWKPESVKICG-QNIRTVTFFYNTFIPDGVWFGFNQCR 169
           DI             SG   W    V I      R  +F    ++   +     +  
Sbjct: 65  DIQLIELHSDGGGYWSGDPDWFVNRVIIISSTQDRVYSFPCFRWVIKDMVLFPGEAT 121

>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3 Length = 370

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 24/116 (20%), Positives = 39/116 (33%), Gaps = 10/116 (8%)

Query: 53  VAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQ 112
                    V+IKT+    + T + I        G       LD+P +  F      T+ 
Sbjct: 251 KDYDLNEIVVMIKTADVQDAGTDNYIYFGIETKDG-VKEEWALDNPGND-FTRNQEGTYT 308

Query: 113 ISGPCTY----DICYQYLLRSG----SDGWKPESVKICGQNIRTVTFFYNTFIPDG 160
           +          DI   ++        +DGWKP  VK+   +   +    N +I  G
Sbjct: 309 LKLKNKNTKYSDIKNMWIRDEKLTVATDGWKPSYVKVIAGDKVRLEKNINEWISGG 364

>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A Length = 370

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 10/110 (9%)

Query: 59  SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP-- 116
                I TS    + T D +        G +     +D+P +  F + S DT+       
Sbjct: 257 ELVAYISTSGEKDAGTDDYMYFGIKTKDG-KTQEWEMDNPGND-FMTGSKDTYTFKLKDE 314

Query: 117 -CTYDICYQYLLR-----SGSDGWKPESVKICGQNIRTVTFFYNTFIPDG 160
               D      +R     +  D +KPE++KI       V    N +I   
Sbjct: 315 NLKIDDIQNMWIRKRKYTAFPDAYKPENIKIIANGKVVVDKDINEWISGN 364

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	177
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	99.92
3v98_A	691	Arachidonate 5-lipoxygenase; dioxygenase, oxidored	99.89
3dy5_A	1066	Allene oxide synthase-lipoxygenase protein; fusion	99.87
1lox_A	662	15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot	99.86
3fg1_A	696	Allene oxide synthase-lipoxygenase protein; arichi	99.86
3cwz_B	384	RAB6IP1, RAB6-interacting protein 1; RAB small GTP	99.83
2wxu_A	370	Phospholipase C; cytolysis, hydrolase, hemolysis,	99.77
1olp_A	370	Alpha-toxin; zinc phospholipase C, GAS gangrene de	99.75
1bu8_A	452	Protein (pancreatic lipase related protein 2); hyd	98.88
1rp1_A	450	Pancreatic lipase related protein 1; hydrolase, li	98.87
1hpl_A	449	Lipase; hydrolase(carboxylic esterase); 2.30A {Equ	98.82
1gpl_A	432	RP2 lipase; serine esterase, hydrolase, lipid degr	98.74
1w52_X	452	Pancreatic lipase related protein 2; detergent, cl	98.6
2iuj_A	853	Lipoxygenase L-5; dioxygenase, metal-binding, oxid	94.77

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa}

Probab=99.92  E-value=2.9e-25  Score=211.01  Aligned_cols=107  Identities=21%  Similarity=0.241  Sum_probs=98.0

Q ss_pred             cCCCceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecCCCCCeeEEEEEEcCC--
Q 030462           54 AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS--  131 (177)
Q Consensus        54 ~~~~C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~Clg~Ic~l~L~rdG~--  131 (177)
                      ..++|.|+|+|+||++.+|||||+|+|.|+|.+|+++....|+++++++||||++|+|.++..|||+||+|+||||++  
T Consensus        16 ~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~~S~~~~L~~~~~~~FeRGs~D~F~v~~~~LG~L~~IrI~hDnsG~   95 (698)
T 3vf1_A           16 HHHHMKYKITVETGDLRGAGTDASVSIKLTGKDGAETSAFSLDKYFHNDFESGGTDTYDQSGVDVGEIAMITLKENGFGL   95 (698)
T ss_dssp             ---CEEEEEEEEECSCCCSCSBCCEEEEEEETTSCBCCCEEECCBCSSSSCCCCEEEEEEEECCCSSEEEEEEEECCCSS
T ss_pred             CCCcceEEEEEEECCCCCCCCCceeEEEEEECCCCeecceEeCCCCCCccccCCeeEEEEEecccCCceEEEEEECCCCC
Confidence            467999999999999999999999999999999995588899999999999999999999889999999999999975  


Q ss_pred             -CCceeeEEEEeccC-----CceEEEEeceecCCC
Q 030462          132 -DGWKPESVKICGQN-----IRTVTFFYNTFIPDG  160 (177)
Q Consensus       132 -dgW~~e~V~V~~~~-----~~~~~F~~n~WL~~~  160 (177)
                       +||||++|+|++..     ++.+.|+|+|||+.|
T Consensus        96 ~~~Wfl~~V~V~~~~t~~~~g~~~~Fpc~rWL~~d  130 (698)
T 3vf1_A           96 KSDWYIAKVIIEKIDEATGFSNKYIFPCYRWVIKQ  130 (698)
T ss_dssp             BCCCEEEEEEEEEECTTTCCEEEEEEEEEEECSSE
T ss_pred             CCCeEEeEEEEEcCCCCCCCCcEEEEEhhhcccCC
Confidence             49999999999764     688999999999998

>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B

Probab=99.89  E-value=7.7e-23  Score=194.27  Aligned_cols=103  Identities=19%  Similarity=0.233  Sum_probs=91.1

Q ss_pred             cCCCceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecCC-CCCeeEEEEEEcCC-
Q 030462           54 AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPC-TYDICYQYLLRSGS-  131 (177)
Q Consensus        54 ~~~~C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~C-lg~Ic~l~L~rdG~-  131 (177)
                      ..+.|.|+|+|+||++.+|||+|+|+|.|.|.+|.+ ....|++   ++||||++|+|.++.++ +|+||.|+||||++ 
T Consensus        18 ~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~S-~~~~L~~---~~FeRG~~D~F~v~~~~~LG~L~~IrI~hDnsG   93 (691)
T 3v98_A           18 GSHMPSYTVTVATGSQEHAGTDDYIYLSLVGSAGCS-EKHLLDK---GSFERGAVDSYDVTVDEELGEIQLVRIEKRKYG   93 (691)
T ss_dssp             -----CEEEEEEECCSTTCCBCSEEEEEEEESSCBC-CCEECCS---SCBCTTCEEEEEECCSSCCCSEEEEEEEEECSS
T ss_pred             CCCceeEEEEEEECCCCCCCCCceeEEEEEECCCce-eeEEecC---CcccCCCeeEEEEEeccCCCCceEEEEEECCCC
Confidence            367899999999999999999999999999999997 6678876   89999999999998855 99999999999965 


Q ss_pred             --CCceeeEEEEeccCCceEEEEeceecCCC
Q 030462          132 --DGWKPESVKICGQNIRTVTFFYNTFIPDG  160 (177)
Q Consensus       132 --dgW~~e~V~V~~~~~~~~~F~~n~WL~~~  160 (177)
                        ++|||++|+|.++.++.+.|+|++||+.|
T Consensus        94 ~~~~Wfl~~V~V~~~~g~~~~Fpc~rWL~~d  124 (691)
T 3v98_A           94 SNDDWYLKYITLKTPHGDYIEFPCYRWITGD  124 (691)
T ss_dssp             SCCCEEEEEEEEECTTSCEEEEEEEEEECSS
T ss_pred             CCCCeEEeEEEEECCCCcEEEEehHHhcCCC
Confidence              39999999999877888999999999987

>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}

Probab=99.87  E-value=1.9e-22  Score=198.71  Aligned_cols=105  Identities=21%  Similarity=0.273  Sum_probs=89.9

Q ss_pred             CCCceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecCCCCCeeEEEEEEcCC---
Q 030462           55 AKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS---  131 (177)
Q Consensus        55 ~~~C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~Clg~Ic~l~L~rdG~---  131 (177)
                      ...|.|+|+|+||++.+|||+|+|+|.|+|.+|++ ....|+++++++||||++|+|.++..+||+||+|+||||++   
T Consensus       371 ~~~~~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~S-~~~~L~~~~~~~FeRGs~d~F~v~~~~LG~L~~IrI~hDnsG~~  449 (1066)
T 3dy5_A          371 GQNAIYNVEVETGDREHAGTDATITIRITGAKGRT-DYLKLDKWFHNDFEAGSKEQYTVQGFDVGDIQLIELHSDGGGYW  449 (1066)
T ss_dssp             --CCEEEEEEEECCSTTCCCCSCCEEEEEESSCBC-CCEEC-------CCTTCEEEEEEECSCCSSEEEEEEECCCCC--
T ss_pred             cCceeEEEEEEECCCCCCCCCceeEEEEEECCCce-eeEEeCCCCcCccccCCcceEEEEEecCCCceEEEEEECCCCCC
Confidence            35799999999999999999999999999999997 77899999999999999999999887799999999999953   


Q ss_pred             ---CCceeeEEEEecc-CCceEEEEeceecCCC
Q 030462          132 ---DGWKPESVKICGQ-NIRTVTFFYNTFIPDG  160 (177)
Q Consensus       132 ---dgW~~e~V~V~~~-~~~~~~F~~n~WL~~~  160 (177)
                         ++|||++|+|.++ +++.+.|+|++||+.|
T Consensus       450 ~~~~~Wfl~~V~V~~~~tg~~~~Fpc~rWL~~d  482 (1066)
T 3dy5_A          450 SGDPDWFVNRVIIISSTQDRVYSFPCFRWVIKD  482 (1066)
T ss_dssp             CCCCCEEEEEEEEEESSSSSCEEEEEEEEESSE
T ss_pred             CCCCCeEEeEEEEEeCCCCCEEEEehhhhccCC
Confidence               4999999999987 4789999999999998

>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A*

Probab=99.86  E-value=1e-21  Score=185.77  Aligned_cols=96  Identities=13%  Similarity=0.123  Sum_probs=87.2

Q ss_pred             eEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecCC-CCCeeEEEEEEcCC---CCc
Q 030462           59 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPC-TYDICYQYLLRSGS---DGW  134 (177)
Q Consensus        59 ~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~C-lg~Ic~l~L~rdG~---dgW  134 (177)
                      .|+|+|+||++.+|||||+|+|+|+|++|++. ...|+     +||||++|+|.+..++ +|+||.|+|+||+.   ++|
T Consensus         2 ~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~s~-~~~L~-----~FerG~~d~F~v~~~~dlG~l~~I~I~~d~~g~~~~W   75 (662)
T 1lox_A            2 VYRVCVSTGASIYAGSKNKVELWLVGQHGEVE-LGSCL-----RPTRNKEEEFKVNVSKYLGSLLFVRLRKKHFLKEDAW   75 (662)
T ss_dssp             EEEEEEEECCSTTCCCSSEEEEEEEESSCEEE-EEEEE-----CCCTTCEEEEEEECSSCCCSEEEEEEEEECSSSCCCE
T ss_pred             eEEEEEEECCCcCCCcCCcEEEEEEECCCCcc-CeeCC-----CcCCCCccEEEEEecCCCCcceEEEEEeCCCCCCCCc
Confidence            59999999999999999999999999999984 45586     8999999999998866 89999999999976   599


Q ss_pred             eeeEEEEeccC--CceEEEEeceecCCC
Q 030462          135 KPESVKICGQN--IRTVTFFYNTFIPDG  160 (177)
Q Consensus       135 ~~e~V~V~~~~--~~~~~F~~n~WL~~~  160 (177)
                      ||++|+|.+++  +..+.|+||+||+.+
T Consensus        76 fl~~V~V~~p~~~g~~~~F~Cn~WL~~~  103 (662)
T 1lox_A           76 FCNWISVQALGAAEDKYWFPCYRWVVGD  103 (662)
T ss_dssp             EEEEEEEEESSSCCCCEEEEEEEEECSS
T ss_pred             EEeEEEEecCCCCCcEEEEEeceEecCC
Confidence            99999999875  566999999999973

>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A

Probab=99.86  E-value=1e-21  Score=186.70  Aligned_cols=101  Identities=23%  Similarity=0.294  Sum_probs=92.6

Q ss_pred             CCceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecCCCCCeeEEEEEEcCC----
Q 030462           56 KSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS----  131 (177)
Q Consensus        56 ~~C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~Clg~Ic~l~L~rdG~----  131 (177)
                      ...-|.|+|+||++.+|||+|+|+|.|+|.+|.+ ....|++   ++||||++|+|.++..++|+|+.|+||||++    
T Consensus         5 ~~~~~~~~V~TG~~~~AGTda~V~I~L~G~~G~S-~~~~L~~---~~FeRGs~d~F~v~~~dLG~L~~IrI~hDnsg~G~   80 (696)
T 3fg1_A            5 HHAIYNVEVETGDREHAGTDATITIRITGAKGRT-DYLKLDK---GSFEAGSKEQYTVQGFDVGDIQLIELHSDGGGYWS   80 (696)
T ss_dssp             CEEEEEEEEEECSSTTCCBCSCEEEEEEETTEEC-CCEEECS---SCBCTTCEEEEEEEEECCSSEEEEEEEECCCCTTC
T ss_pred             ccceeeEEEEeCCCCCCCCCceeEEEEEECCCce-eeEEeCC---CCcCCCCccEEEEEEccCCCceEEEEEECCcCCCC
Confidence            4557999999999999999999999999999996 6778876   8999999999999887799999999999965    


Q ss_pred             -C-CceeeEEEEecc-CCceEEEEeceecCCC
Q 030462          132 -D-GWKPESVKICGQ-NIRTVTFFYNTFIPDG  160 (177)
Q Consensus       132 -d-gW~~e~V~V~~~-~~~~~~F~~n~WL~~~  160 (177)
                       + +|||++|+|.++ +++.+.|+|++||+.|
T Consensus        81 ~~~~Wf~~~V~V~~~~tg~~~~Fpc~rWL~~d  112 (696)
T 3fg1_A           81 GDPDWFVNRVIIISSTQDRVYSFPCFRWVIKD  112 (696)
T ss_dssp             SCCCEEEEEEEEEETTCSSCEEEEEEEEESSE
T ss_pred             CCCCeEeeEEEEEeCCCCcEEEeEhhhhccCC
Confidence             4 999999999987 4788999999999997

>3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus}

Probab=99.83  E-value=2.5e-20  Score=166.97  Aligned_cols=96  Identities=14%  Similarity=0.129  Sum_probs=85.8

Q ss_pred             CCCceEEEEEEcCCCCC-CCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecCCCCCeeEEEEEEcCC--
Q 030462           55 AKSCSYTVIIKTSCSSK-SYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS--  131 (177)
Q Consensus        55 ~~~C~YtVtIkTG~~~~-AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~Clg~Ic~l~L~rdG~--  131 (177)
                      ...|.|+|+|+||.+.+ |||+|+|+|.|+|.+|++ ....|+++         .|.|.+...|||++++|+||||++  
T Consensus       245 tt~~~Y~V~V~TG~~~gaAGT~anV~I~L~G~~G~S-~~~~L~~~---------~d~F~v~~~~LG~L~~I~I~HDnsG~  314 (384)
T 3cwz_B          245 TILIPYHILIVPSKKLGGSMFTANPWICISGELGET-QILQIPRN---------VLEMTFECQNLGKLTTVQIGHDNSGL  314 (384)
T ss_dssp             TSEEEEEEEEEECCCCCSCCCCSCEEEEEEESSCBC-CCEECCTT---------CCEEEEEEECCCSEEEEEEEECCCSS
T ss_pred             ccceeEEEEEEeCCCCCCCCCCCcEEEEEEeCCCCc-ccEEeccc---------CceEEEecccCCCceEEEEEECCCCC
Confidence            45789999999999998 699999999999999997 56678653         689999999999999999999965  


Q ss_pred             -CCceeeEEEEecc-CCceEEEEeceecCCC
Q 030462          132 -DGWKPESVKICGQ-NIRTVTFFYNTFIPDG  160 (177)
Q Consensus       132 -dgW~~e~V~V~~~-~~~~~~F~~n~WL~~~  160 (177)
                       +||||++|+|.++ ++..+.|+|++||+.|
T Consensus       315 ~p~Wfl~~V~V~d~~tg~~~~Fpc~rWL~~d  345 (384)
T 3cwz_B          315 YAKWLVECVMVRNEVTGHTYKFPCGRWLGKG  345 (384)
T ss_dssp             CCCEEEEEEEEEETTTCCEEEEEEEEEESTT
T ss_pred             CCceeEeEEEEEeCCCCcEEEEECceeCCCC
Confidence             3999999999987 5788999999999965

>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A

Probab=99.77  E-value=2.9e-18  Score=153.08  Aligned_cols=103  Identities=22%  Similarity=0.262  Sum_probs=91.4

Q ss_pred             CceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeec---CC-CCCeeEEEEEEcCC-
Q 030462           57 SCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG---PC-TYDICYQYLLRSGS-  131 (177)
Q Consensus        57 ~C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g---~C-lg~Ic~l~L~rdG~-  131 (177)
                      -=.|.|+|+||....|||+++|+|.|.|..|.+... .||++ .++||||++|+|.|.-   +. +|+|..|+|++... 
T Consensus       255 ~~~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges~~~-~LD~~-gndFe~G~~d~y~v~~~~~~~~lg~l~~v~l~K~~~~  332 (370)
T 2wxu_A          255 VKELVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEW-EMDNP-GNDFMTGSKDTYTFKLKDENLKIDDIQNMWIRKRKYT  332 (370)
T ss_dssp             CCEEEEEEEECCSTTCSCCSEEEEEEEETTCCEEEE-ECCCS-SCTTCTTCEEEEEEECSCTTCCGGGEEEEEEEEECSS
T ss_pred             ceeEEEEEEcCCcccCCCcceEEEEEEcCCCccchh-hhhCc-CCCcCCCCeeeEEEecCCCccCcCceEEEEEEccCCC
Confidence            347999999999999999999999999999998555 58885 6999999999999954   44 89999999998865 


Q ss_pred             ---CCceeeEEEEeccCCceEEEEeceecCCCC
Q 030462          132 ---DGWKPESVKICGQNIRTVTFFYNTFIPDGV  161 (177)
Q Consensus       132 ---dgW~~e~V~V~~~~~~~~~F~~n~WL~~~~  161 (177)
                         |+|||++|+|..+.+....||||+||..+.
T Consensus       333 ~~~D~Wfc~~i~V~~p~~~~~~FP~y~Wi~g~~  365 (370)
T 2wxu_A          333 AFPDAYKPENIKIIANGKVVVDKDINEWISGNS  365 (370)
T ss_dssp             SSCCCBCEEEEEEEETTEEEEEEECCSCBCTTC
T ss_pred             CCCccceeeeEEEEcCCCcEEEeccceeeeCCe
Confidence               799999999999887889999999998653

>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3

Probab=99.75  E-value=7.1e-18  Score=150.62  Aligned_cols=102  Identities=24%  Similarity=0.298  Sum_probs=91.0

Q ss_pred             CceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeec----CCCCCeeEEEEEEcCC-
Q 030462           57 SCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG----PCTYDICYQYLLRSGS-  131 (177)
Q Consensus        57 ~C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g----~Clg~Ic~l~L~rdG~-  131 (177)
                      -=.|.|+|+||....|||+++|+|.|.|..|.+-.. .||++ .++||||++|+|.|.-    ..+|+|..|+|.+... 
T Consensus       255 ~n~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges~~~-~LD~~-gndFe~G~~d~y~v~~~~~~~dlg~l~~v~l~K~~~~  332 (370)
T 1olp_A          255 LNEIVVMIKTADVQDAGTDNYIYFGIETKDGVKEEW-ALDNP-GNDFTRNQEGTYTLKLKNKNTKYSDIKNMWIRDEKLT  332 (370)
T ss_dssp             CSEEEEEEEECSSTTCCCCSEEEEEEEETTCCEEEE-ECCCS-SCCSCTTCEEEEEEECSCSSCCGGGEEEEEEEEECSS
T ss_pred             cceEEEEEEcCCcccCCCcceEEEEEEcCCCccchh-hhhCc-CCccCCCCeeEEEEeccCCcCCcCceEEEEEEcCCCC
Confidence            447999999999999999999999999999999555 58884 5999999999999965    4489999999988865 


Q ss_pred             ---CCceeeEEEEeccCCceEEEEeceecCCC
Q 030462          132 ---DGWKPESVKICGQNIRTVTFFYNTFIPDG  160 (177)
Q Consensus       132 ---dgW~~e~V~V~~~~~~~~~F~~n~WL~~~  160 (177)
                         |+|||++|+|..+++....||||+||..+
T Consensus       333 ~~~D~Wfc~~i~V~~p~~~~~~FP~y~Wi~g~  364 (370)
T 1olp_A          333 VATDGWKPSYVKVIAGDKVRLEKNINEWISGG  364 (370)
T ss_dssp             SSCCEECEEEEEEEETTEEEEEEECCSCEETT
T ss_pred             CCCccceeeeEEEEcCCCcEEEeccceeeeCc
Confidence               79999999999988788999999999765

>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*

Probab=98.88  E-value=8.8e-09  Score=92.38  Aligned_cols=108  Identities=12%  Similarity=0.076  Sum_probs=88.1

Q ss_pred             CCCceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEe-ecCCCCCeeEEE-EEEcCC-
Q 030462           55 AKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQI-SGPCTYDICYQY-LLRSGS-  131 (177)
Q Consensus        55 ~~~C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v-~g~Clg~Ic~l~-L~rdG~-  131 (177)
                      -....|.|+|+|+.  .++|+++|.|+|+|.+|++ ....|.++   .||+|++++|.+ .+..+|+|.+|+ +|++.. 
T Consensus       337 f~~~~Y~v~V~~~~--~~~t~g~i~v~L~G~~g~s-~~~~l~~~---~~~~g~~~s~li~~~~dlG~l~~v~~~W~~~~~  410 (452)
T 1bu8_A          337 FTRWRYKVSVTLSG--AKKLSGYILVALYGNNGNS-KQYEIFKG---SLKPEARHVRDIDVDINVGEIQKVKFLWNNKVI  410 (452)
T ss_dssp             CCCEEEEEEEEEEC--SSCEEEEEEEEEEETTEEC-CCEEEEEE---EECTTCEEEEEEEESSCCCSEEEEEEEEEC---
T ss_pred             CcceeeEEEEEEcC--CCceeeEEEEEEEcCCCCc-ceEEeccc---ccCCCCEEEEEEeCCCCCCCceEEEEEEECCCC
Confidence            34677999999965  5799999999999999987 44455443   599999999999 688899999999 888732 


Q ss_pred             ----CCceeeEEEEecc-CCceEEEEeceecCCCCceeeecC
Q 030462          132 ----DGWKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  168 (177)
Q Consensus       132 ----dgW~~e~V~V~~~-~~~~~~F~~n~WL~~~~~yg~n~C  168 (177)
                          ..|+.++|+|.+. +.++..|=.++|+.+++--...-|
T Consensus       411 ~~~~p~~~i~~I~V~~~e~~~~~~FC~~~~~~~~~~~~~~~~  452 (452)
T 1bu8_A          411 NLFRPTLGASQITVQSGVDGKEYNFCSSDTVREDVLQSLYPC  452 (452)
T ss_dssp             ---CCCBEEEEEEEEETTTCCEEEEECCCCBCTTCCEEEEEC
T ss_pred             CCCCCeEEEEEEEEEeCCCCCeEEecCCCccccCceecccCC
Confidence                4999999999965 677899999999998865555444

>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A

Probab=98.87  E-value=7.1e-09  Score=93.49  Aligned_cols=107  Identities=13%  Similarity=0.077  Sum_probs=88.5

Q ss_pred             CCCceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEe-ecCCCCCeeEEE-EEEcC--
Q 030462           55 AKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQI-SGPCTYDICYQY-LLRSG--  130 (177)
Q Consensus        55 ~~~C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v-~g~Clg~Ic~l~-L~rdG--  130 (177)
                      -..+.|.|+|+|+.   ++|+++|.|+|+|.+|++ ....|.++   .||+|++++|.+ .+..+|+|.+|+ +|++.  
T Consensus       336 f~~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s-~~~~l~~~---~~~~g~t~s~li~~~~dlG~l~~v~~~W~~~~~  408 (450)
T 1rp1_A          336 FARWRYGVSITLSG---KRATGQAKVALFGSKGNT-HQFNIFKG---ILKPGSTHSNEFDAKLDVGTIEKVKFLWNNNVV  408 (450)
T ss_dssp             CCCEEEEEEEEEEE---SCEEEEEEEEEEETTEEC-CCEEEEEE---EECTTCEEEEEEEESSCCSSEEEEEEEEEEC--
T ss_pred             cccceeEEEEEEcC---CceeEEEEEEEEcCCCCc-ceEEeccc---ccCCCCEEEEEEECCCCCCCceEEEEEEECCCC
Confidence            34678999999987   899999999999999987 44556443   699999999999 677899999999 78773  


Q ss_pred             ---CCCceeeEEEEecc-CCceEEEEeceecCCCCceeeecC
Q 030462          131 ---SDGWKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  168 (177)
Q Consensus       131 ---~dgW~~e~V~V~~~-~~~~~~F~~n~WL~~~~~yg~n~C  168 (177)
                         ...|+.++|+|... +.++..|=+++|+.+++--...-|
T Consensus       409 ~~~~p~~~i~~I~V~~~e~~~~~~FC~~~~~~~~~~~~~~~~  450 (450)
T 1rp1_A          409 NPTFPKVGAAKITVQKGEEKTVHSFCSESTVREDVLLTLTPC  450 (450)
T ss_dssp             CTTCCCEEEEEEEEEETTCSSCEEEECSCEECTTCCEEEEEC
T ss_pred             CCCCCeEEEEEEEEEeCCCCCeEEecCCCccccCceecccCC
Confidence               24999999999965 667789999999998866555444

>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19

Probab=98.82  E-value=8.9e-09  Score=92.80  Aligned_cols=97  Identities=12%  Similarity=-0.004  Sum_probs=79.7

Q ss_pred             CCCceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEe-ecCCCCCeeEEE-EEEcC--
Q 030462           55 AKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQI-SGPCTYDICYQY-LLRSG--  130 (177)
Q Consensus        55 ~~~C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v-~g~Clg~Ic~l~-L~rdG--  130 (177)
                      -..+.|.|+|+|+.   ++|+++|.|+|+|.+|++ ....|.++   .||+|++++|.+ .+..+|+|.+|+ +|++.  
T Consensus       336 f~~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s-~~~~l~~~---~~~~g~~~s~li~~~~dlG~l~~v~~~W~~~~~  408 (449)
T 1hpl_A          336 FARWRYRVDVTLSG---KKVTGHVLVSLFGNKGNS-RQYEIFQG---TLKPDNTYSNEFDSDVEVGDLEKVKFIWYNNVI  408 (449)
T ss_dssp             CCCEEEEEEEEEEE---CCEEEEEEEEEEETTEEC-CCEEEEEE---EECSSCEEEEEEEESSCCCSEEEEEEEEEECSC
T ss_pred             cccceeEEEEEEcC---CceeEEEEEEEEcCCCCc-eeEEeccc---ccCCCcEEEEEEeCCCCCCCceEEEEEEECCCC
Confidence            34778999999997   899999999999999987 44556443   699999999999 678899999999 78873  


Q ss_pred             ---CCCceeeEEEEeccCCceEEEEeceecCC
Q 030462          131 ---SDGWKPESVKICGQNIRTVTFFYNTFIPD  159 (177)
Q Consensus       131 ---~dgW~~e~V~V~~~~~~~~~F~~n~WL~~  159 (177)
                         ...|+.++|+|.+ ......+-|++|+-.
T Consensus       409 ~~~~p~~~i~~I~V~~-e~~~~~~fC~~~~~~  439 (449)
T 1hpl_A          409 NLTLPKVGASKITVER-NDGSVFNFCSEETVR  439 (449)
T ss_dssp             CTTCCCEEEEEEEEEC-TTSCEEEEECCCCBC
T ss_pred             CCCCCeEEEEEEEEEe-CCCCeeeecCCCccc
Confidence               2499999999999 655444449998753

>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A

Probab=98.74  E-value=4.1e-08  Score=87.10  Aligned_cols=103  Identities=13%  Similarity=0.047  Sum_probs=81.6

Q ss_pred             CCCceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEe-ecCCCCCeeEEE-EEEcCC-
Q 030462           55 AKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQI-SGPCTYDICYQY-LLRSGS-  131 (177)
Q Consensus        55 ~~~C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v-~g~Clg~Ic~l~-L~rdG~-  131 (177)
                      -....|.|+|.|+.   ++|+++|.|+|+|.+|++ ....|.++   .||+|++++|.+ .+..+|+|.+|+ +|++.. 
T Consensus       319 f~~~~Y~v~v~~~~---~~~~g~i~v~L~G~~g~s-~~~~l~~~---~~~~g~~~s~li~~~~~lG~l~~v~~~W~~~~~  391 (432)
T 1gpl_A          319 FTRWRYKVSVTLSG---KKVTGHILVSLFGNKGNS-KQYEIFKG---TLKPDSTHSNEFDSDVDVGDLQMVKFIWYNNVI  391 (432)
T ss_dssp             CCCEEEEEEEEEEE---CCEEEEEEEEEEESSCEE-EEEEEEEE---EECTTCEEEEEEEESSCCCSEEEEEEEEEESSC
T ss_pred             CccceeEEEEEEcC---CceeEEEEEEEEcCCCCc-eeEEeccc---ccCCCcEEEEEEeCCCCCCCceEEEEEEEcCCC
Confidence            34677999999987   899999999999999997 44566543   599999999999 678899999999 888732 


Q ss_pred             ----CCceeeEEEEeccCCceEEEEece-ecCCCCceee
Q 030462          132 ----DGWKPESVKICGQNIRTVTFFYNT-FIPDGVWFGF  165 (177)
Q Consensus       132 ----dgW~~e~V~V~~~~~~~~~F~~n~-WL~~~~~yg~  165 (177)
                          ..|+.++|+|.+..... .|-|.+ .+.+++--..
T Consensus       392 ~~~~~~~~i~~I~v~~~e~~~-~~fC~~~~~~~~~~~~~  429 (432)
T 1gpl_A          392 NPTLPRVGASKIIVETNVGKQ-FNFCSPETVREEVLLTL  429 (432)
T ss_dssp             CTTCCEEEEEEEEEECTTSCE-EEEECSCCEETTCCEEE
T ss_pred             CCCCCeEEEEEEEEEeCCCCC-ceecCCCccccCceecc
Confidence                49999999999775555 777744 4545543333

>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}

Probab=98.60  E-value=6.2e-09  Score=93.36  Aligned_cols=108  Identities=12%  Similarity=0.084  Sum_probs=88.2

Q ss_pred             CCCceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEe-ecCCCCCeeEEE-EEEcC--
Q 030462           55 AKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQI-SGPCTYDICYQY-LLRSG--  130 (177)
Q Consensus        55 ~~~C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v-~g~Clg~Ic~l~-L~rdG--  130 (177)
                      -..+.|.|+|+|+.  .++|+++|.|+|+|.+|++ ....|.++   .||+|++++|.+ .+..+|+|.+|+ +|++.  
T Consensus       337 f~~~~Y~v~v~~~~--~~~t~g~i~v~L~G~~g~s-~~~~l~~~---~~~~g~~~s~li~~~~dlG~l~~v~~~W~~~~~  410 (452)
T 1w52_X          337 YTSWRYRVSITLAG--SGKANGYLKVTLRGSNGNS-KQYEIFKG---SLQPDSSYTLDVDVNFIIGKIQEVKFVWNKTVL  410 (452)
T ss_dssp             CCCEEEEECCBCCS--SSCCEECBCCCBCCSSCCC-CCCCCCCE---ECCSSCCCCEEEEESSCCCCCCCBCCCBCCSSC
T ss_pred             ccceeeEEEEEEcC--CcceeeEEEEEEEcCCCCc-ceEecccc---ccCCCCEEEEEEECCCCCCCceEEEEEEECCCC
Confidence            34677999999985  5799999999999999997 45566553   699999999999 678899999999 78873  


Q ss_pred             ---CCCceeeEEEEecc-CCceEEEEeceecCCCCceeeecC
Q 030462          131 ---SDGWKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  168 (177)
Q Consensus       131 ---~dgW~~e~V~V~~~-~~~~~~F~~n~WL~~~~~yg~n~C  168 (177)
                         ...|+.++|+|... +.++..|=+++|+.+++--...-|
T Consensus       411 ~~~~~~~~i~~I~V~~~e~~~~~~fC~~~~~~~~~~~~~~~~  452 (452)
T 1w52_X          411 NLSKPQLGASRITVQSGADGTEYKFCGSGTVQDNVEQSLYPC  452 (452)
T ss_dssp             CSCCCCCCCSBCCCCBSSSCCCCCEECCSCCCSSCCCCCEEC
T ss_pred             CCCCCeEEEEEEEEEeCCCCCeEEecCCCccccCceecccCC
Confidence               24999999999965 667788999999998755444433

>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max}

Probab=94.77  E-value=0.21  Score=48.80  Aligned_cols=82  Identities=15%  Similarity=0.113  Sum_probs=54.0

Q ss_pred             eEEEEEeeC----CCCe--eeeeccCCCCCC-CCcCCCceeeEe--e-cCCCCCeeEEEEEEcCCCCceeeEEEEec-cC
Q 030462           77 KISLAFGDA----YGNE--VYIKRLDDPYSR-TFESCSTDTFQI--S-GPCTYDICYQYLLRSGSDGWKPESVKICG-QN  145 (177)
Q Consensus        77 ~IsI~l~da----~Gn~--v~~~~Ld~p~~~-~FErgs~DtF~v--~-g~Clg~Ic~l~L~rdG~dgW~~e~V~V~~-~~  145 (177)
                      .|++.|..+    .|..  .....|++-.+. ..+.| ...|.+  . ...+|.+-.+.|.....+.|||++|+|.+ +.
T Consensus        55 ~v~lqlvs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~f~~~~~~G~~gav~v~n~~~~e~fl~~i~l~~~p~  133 (853)
T 2iuj_A           55 SISIQLISATKADGGKGKVGKATNLRGKITLPTIGAK-EEAYDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPN  133 (853)
T ss_dssp             SEEEEEEEEEEESSSSEEEEEEEECCCCCCCSSCCTT-EEEEEEEEECCSSSCCEEEEEEEECSSSCEEEEEEEECCCTT
T ss_pred             eEEEEEEEeeeCCCCCcccCCccccccccCCCCCCCC-ceEEEEEeeccccCCCceEEEEEecCCccceEeEEEEeecCC
Confidence            466666544    3432  224455542222 13333 446888  3 34489999999977667899999999987 54


Q ss_pred             CceEEEEeceecCC
Q 030462          146 IRTVTFFYNTFIPD  159 (177)
Q Consensus       146 ~~~~~F~~n~WL~~  159 (177)
                      ...+.|+||+||..
T Consensus       134 ~g~~~F~c~sWv~~  147 (853)
T 2iuj_A          134 HGTIHFICNSWVYN  147 (853)
T ss_dssp             SCCEEEEEEEEECB
T ss_pred             CCcEEEEecccccC
Confidence            13488999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	177
d2p0ma2	111	b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Orycto	0.002

>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 111

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 34.2 bits (78), Expect = 0.002
 Identities = 13/101 (12%), Positives = 29/101 (28%), Gaps = 12/101 (11%)

Query: 60  YTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTY 119
           Y V + T  S  + +++K+ L     +G                     + F+++     
Sbjct: 3   YRVCVSTGASIYAGSKNKVELWLVGQHGEVELGSC------LRPTRNKEEEFKVNVSKYL 56

Query: 120 -DICYQYLLRSGS---DGWKPESVKIC--GQNIRTVTFFYN 154
             + +  L +      D W    + +   G       F   
Sbjct: 57  GSLLFVRLRKKHFLKEDAWFCNWISVQALGAAEDKYWFPCY 97

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	177
d1ca1a2	121	Alpha-toxin, C-terminal domain {Clostridium perfri	99.93
d1olpa2	121	Alpha-toxin, C-terminal domain {Clostridium absonu	99.92
d2p0ma2	111	15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T	99.92
d1rp1a1	113	Pancreatic lipase, C-terminal domain {Dog (Canis f	99.76
d1bu8a1	114	Pancreatic lipase, C-terminal domain {Rat (Rattus	99.74
d1gpla1	112	Pancreatic lipase, C-terminal domain {Guinea pig (	99.61

>d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium perfringens, different strains [TaxId: 1502]

Probab=99.93  E-value=1.6e-25  Score=169.43  Aligned_cols=105  Identities=21%  Similarity=0.234  Sum_probs=93.3

Q ss_pred             CceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecCC----CCCeeEEEEEEcCC-
Q 030462           57 SCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPC----TYDICYQYLLRSGS-  131 (177)
Q Consensus        57 ~C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~C----lg~Ic~l~L~rdG~-  131 (177)
                      .=.|+|+|+||.+.+|||+|+|+|.|+|.+|++ ....|+++. +.||||++|+|.+..++    +|+|+.|+|+||+. 
T Consensus         6 ~~~~~v~V~TG~~~~AGTda~V~i~l~G~~G~s-~~~~L~~~~-~~Ferg~~d~F~v~~~d~~~~lG~i~ki~i~hd~~g   83 (121)
T d1ca1a2           6 VKELVAYISTSGEKDAGTDDYMYFGIKTKDGKT-QEWEMDNPG-NDFMTGSKDTYTFKLKDENLKIDDIQNMWIRKRKYT   83 (121)
T ss_dssp             CCEEEEEEEECCSTTCCCCSEEEEEEEETTSCE-EEEECCCSS-SCSCTTCEEEEEEECSCSSCCGGGEEEEEEEEECSS
T ss_pred             ceeEEEEEEeCCCCCCCCCCeEEEEEEeCCCCe-eeEEecCCC-ccccCCcEEEEEEEeCCcCCCcCCceEEEEEEcCcc
Confidence            447999999999999999999999999999987 677898774 78999999999997654    89999999999953 


Q ss_pred             ---CCceeeEEEEeccCCceEEEEeceecCCCCce
Q 030462          132 ---DGWKPESVKICGQNIRTVTFFYNTFIPDGVWF  163 (177)
Q Consensus       132 ---dgW~~e~V~V~~~~~~~~~F~~n~WL~~~~~y  163 (177)
                         ++|||++|+|...+++.+.|+||+||..+-.|
T Consensus        84 ~~~~~W~l~~V~v~~~~~~~~~F~~nrWl~~~~~~  118 (121)
T d1ca1a2          84 AFPDAYKPENIKVIANGKVVVDKDINEWISGNSTY  118 (121)
T ss_dssp             SSCCCBCEEEEEEEETTEEEEEEECCSCBCSSCEE
T ss_pred             ccCchhheEEEEEECCCCeEEEeECCEEECCCCEE
Confidence               48999999998667788999999999998655

>d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium absonum [TaxId: 29369]

Probab=99.92  E-value=3.2e-25  Score=167.62  Aligned_cols=106  Identities=23%  Similarity=0.287  Sum_probs=92.8

Q ss_pred             CCceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecCC----CCCeeEEEEEEcCC
Q 030462           56 KSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPC----TYDICYQYLLRSGS  131 (177)
Q Consensus        56 ~~C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~C----lg~Ic~l~L~rdG~  131 (177)
                      +.=.|.|+|+||...+|||+|+|+|.|+|.+|++ ....|+++ .+.||||++|+|.+..+.    +|+|..|+|+||+.
T Consensus         5 ~~~~~~V~v~Tg~~~~AGT~a~V~i~l~G~~g~s-~~~~L~~~-~~~Ferg~~d~F~v~~~d~~~~lG~i~~i~i~hd~~   82 (121)
T d1olpa2           5 DLNEIVVMIKTADVQDAGTDNYIYFGIETKDGVK-EEWALDNP-GNDFTRNQEGTYTLKLKNKNTKYSDIKNMWIRDEKL   82 (121)
T ss_dssp             CCSEEEEEEEECSSTTCCCCSEEEEEEEETTCCE-EEEECCCS-SCCSCTTCEEEEEEECSCSSCCGGGEEEEEEEEECS
T ss_pred             cccEEEEEEEECCCCCCCCcceEEEEEEECCCCc-ccEEecCC-CcccccCCeEEEEEEeCCccCCcCceEEEEEEEcCC
Confidence            3457999999999999999999999999999987 66779876 578999999999997553    89999999999942


Q ss_pred             ----CCceeeEEEEeccCCceEEEEeceecCCCCce
Q 030462          132 ----DGWKPESVKICGQNIRTVTFFYNTFIPDGVWF  163 (177)
Q Consensus       132 ----dgW~~e~V~V~~~~~~~~~F~~n~WL~~~~~y  163 (177)
                          ++|||++|+|....++.+.|+|||||..+-.|
T Consensus        83 g~~~~~W~l~~V~v~~~~~~~~~F~~nrWl~~~~~~  118 (121)
T d1olpa2          83 TVATDGWKPSYVKVIAGDKVRLEKNINEWISGGTTY  118 (121)
T ss_dssp             SSSCCEECEEEEEEEETTEEEEEEECCSCEETTEEE
T ss_pred             CCCCcceeEEEEEEECCCCeEEEEECCEEECCCcEE
Confidence                37999999997666778999999999988655

>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.92  E-value=9.7e-25  Score=162.04  Aligned_cols=96  Identities=13%  Similarity=0.126  Sum_probs=85.7

Q ss_pred             eEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeecC-CCCCeeEEEEEEcCC---CCc
Q 030462           59 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP-CTYDICYQYLLRSGS---DGW  134 (177)
Q Consensus        59 ~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g~-Clg~Ic~l~L~rdG~---dgW  134 (177)
                      .|+|+|+||+.++|||+|+|+|.|+|++|++ ....|+     .||||++|+|.+..+ .+|+|++|+|+||+.   ++|
T Consensus         2 ~Y~I~v~TG~~~~AGT~a~V~i~l~G~~G~s-~~~~l~-----~f~rg~~d~F~~~~~~~lG~i~~i~i~~d~~g~~~~W   75 (111)
T d2p0ma2           2 VYRVCVSTGASIYAGSKNKVELWLVGQHGEV-ELGSCL-----RPTRNKEEEFKVNVSKYLGSLLFVRLRKKHFLKEDAW   75 (111)
T ss_dssp             EEEEEEEECSSSSCCCSSEEEEEEEESSCEE-EEEEEE-----CCCTTCEEEEEEECSSCCCSEEEEEEEEECSSSCCCE
T ss_pred             eEEEEEEECCCCCCCCCCeEEEEEEECCCCC-CCcCcc-----ccccCcEEEEEEEeeccccceEEEEEEECCCCCCCCe
Confidence            5999999999999999999999999999987 445664     499999999999876 599999999999964   499


Q ss_pred             eeeEEEEecc--CCceEEEEeceecCCC
Q 030462          135 KPESVKICGQ--NIRTVTFFYNTFIPDG  160 (177)
Q Consensus       135 ~~e~V~V~~~--~~~~~~F~~n~WL~~~  160 (177)
                      ||++|+|.++  +...+.|+||+||..|
T Consensus        76 ~l~~V~V~~~~~~~~~~~Fpc~~Wl~~d  103 (111)
T d2p0ma2          76 FCNWISVQALGAAEDKYWFPCYRWVVGD  103 (111)
T ss_dssp             EEEEEEEEESSSSCCCEEEEEEEEECSS
T ss_pred             EEEEEEEEecCCCCeEEEEEcCceECCC
Confidence            9999999965  5678999999999876

>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=99.76  E-value=1e-18  Score=129.86  Aligned_cols=104  Identities=13%  Similarity=0.135  Sum_probs=88.1

Q ss_pred             ceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEee-cCCCCCeeEEEEEEcCC--C-C
Q 030462           58 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQYLLRSGS--D-G  133 (177)
Q Consensus        58 C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~-g~Clg~Ic~l~L~rdG~--d-g  133 (177)
                      ..|.|+|+||   +|||+++|+|.|+|..|++ ....|..   +.||||++|+|.+. +..+|+|-.|+|+||..  + +
T Consensus         2 ~rY~V~V~t~---gagT~a~v~i~L~G~~g~t-~~~~l~~---~~f~~g~~~~f~i~~~~~lG~l~~v~i~hdn~g~~~~   74 (113)
T d1rp1a1           2 WRYGVSITLS---GKRATGQAKVALFGSKGNT-HQFNIFK---GILKPGSTHSNEFDAKLDVGTIEKVKFLWNNNVVNPT   74 (113)
T ss_dssp             EEEEEEEEEE---ESCEEEEEEEEEEETTEEC-CCEEEEE---EEECTTCEEEEEEEESSCCSSEEEEEEEEEEC--CTT
T ss_pred             eEEEEEEEEC---CCCccceEEEEEEcCCCCc-ccEEEcc---eeEcCCCEEEEEEEeCCCCCCcEEEEEEECCCCCCCc
Confidence            4799999998   6899999999999999986 6677743   56999999999996 56899999999999943  3 8


Q ss_pred             c---eeeEEEEecc-CCceEEEEeceecCCCCceeeecC
Q 030462          134 W---KPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  168 (177)
Q Consensus       134 W---~~e~V~V~~~-~~~~~~F~~n~WL~~~~~yg~n~C  168 (177)
                      |   ++++|+|... ++..+.|.+++|+..|+...-.-|
T Consensus        75 w~~~~v~~V~V~~~~~g~~~~Fc~~~~v~~~v~~~l~pc  113 (113)
T d1rp1a1          75 FPKVGAAKITVQKGEEKTVHSFCSESTVREDVLLTLTPC  113 (113)
T ss_dssp             CCCEEEEEEEEEETTCSSC-EEECSCEECTTCCEEEEEC
T ss_pred             cccceeEEEEEEcCCCCcEEEECcCceEccCceeccccC
Confidence            8   9999999966 778999999999999976654444

>d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.74  E-value=3.8e-18  Score=126.57  Aligned_cols=105  Identities=12%  Similarity=0.090  Sum_probs=87.0

Q ss_pred             ceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEeec-CCCCCeeEEEEEEcCC--C-C
Q 030462           58 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSGS--D-G  133 (177)
Q Consensus        58 C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~g-~Clg~Ic~l~L~rdG~--d-g  133 (177)
                      ..|+|+|+||..  +||+++|+|+|+|..|++ ....|.   ++.||||++|+|.+.. ..+|++-+|+|+||++  + +
T Consensus         2 ~rY~V~V~t~~~--~gT~~~V~i~L~G~~G~s-~~~~l~---~~~f~rG~~~~f~~~~~~~lG~l~~i~i~hdn~g~~~~   75 (114)
T d1bu8a1           2 WRYKVSVTLSGA--KKLSGYILVALYGNNGNS-KQYEIF---KGSLKPEARHVRDIDVDINVGEIQKVKFLWNNKVINLF   75 (114)
T ss_dssp             EEEEEEEEEECS--SCEEEEEEEEEEETTEEC-CCEEEE---EEEECTTCEEEEEEEESSCCCSEEEEEEEEEC------
T ss_pred             cEEEEEEEECCC--CCcCceEEEEEEeCCCCc-ccCccc---hhhccCCCceEEEEecCcCCCCcEEEEEEECCCcCCCc
Confidence            479999999975  599999999999999986 666774   3579999999999975 5899999999999954  3 8


Q ss_pred             c---eeeEEEEecc-CCceEEEEeceecCCCCceeeecC
Q 030462          134 W---KPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  168 (177)
Q Consensus       134 W---~~e~V~V~~~-~~~~~~F~~n~WL~~~~~yg~n~C  168 (177)
                      |   +++.|+|... +++.+.|.+++|+..|+...---|
T Consensus        76 W~~~~l~~V~V~~~~~g~~~~Fc~~~~v~~~~~~~l~~c  114 (114)
T d1bu8a1          76 RPTLGASQITVQSGVDGKEYNFCSSDTVREDVLQSLYPC  114 (114)
T ss_dssp             CCCBEEEEEEEEETTTCCEEEEECCCCBCTTCCEEEEEC
T ss_pred             ccccceEEEEEEeCCCCCEEEEecCceEcCCceeecccC
Confidence            8   5899999976 678999999999999876554333

>d1gpla1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.61  E-value=1.5e-15  Score=113.02  Aligned_cols=93  Identities=12%  Similarity=0.034  Sum_probs=78.9

Q ss_pred             ceEEEEEEcCCCCCCCCCceEEEEEeeCCCCeeeeeccCCCCCCCCcCCCceeeEee-cCCCCCeeEEEEEEc--CCC-C
Q 030462           58 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQYLLRS--GSD-G  133 (177)
Q Consensus        58 C~YtVtIkTG~~~~AGTda~IsI~l~da~Gn~v~~~~Ld~p~~~~FErgs~DtF~v~-g~Clg~Ic~l~L~rd--G~d-g  133 (177)
                      ..|.|+|+|+   ++||+++|+|.|+|.+|++ ....|.+   +.||||++|+|.+. +..+|++.+|++|||  |.+ +
T Consensus         2 ~rY~V~V~t~---g~~T~~~V~i~L~G~~G~s-~~~~L~~---~~f~~g~t~tf~i~~~~~lG~l~~v~~~hdnsg~~~~   74 (112)
T d1gpla1           2 WRYKVSVTLS---GKKVTGHILVSLFGNKGNS-KQYEIFK---GTLKPDSTHSNEFDSDVDVGDLQMVKFIWYNNVINPT   74 (112)
T ss_dssp             EEEEEEEEEE---ECCEEEEEEEEEEESSCEE-EEEEEEE---EEECTTCEEEEEEEESSCCCSEEEEEEEEEESSCCTT
T ss_pred             cEEEEEEEEc---CCCccceEEEEEEECCCCc-ccEEEcC---ccccCCCEEEEEEEeCCCCCCcEEEEEEECCCCCCCC
Confidence            4799999996   5799999999999999987 6677754   46999999999995 568999999999999  444 9


Q ss_pred             ce---eeEEEEeccCCceEEEEeceecC
Q 030462          134 WK---PESVKICGQNIRTVTFFYNTFIP  158 (177)
Q Consensus       134 W~---~e~V~V~~~~~~~~~F~~n~WL~  158 (177)
                      |+   .+.|+|.+..++.+.| |.++.-
T Consensus        75 w~~~~~~~I~V~~g~g~~~~F-C~~~~v  101 (112)
T d1gpla1          75 LPRVGASKIIVETNVGKQFNF-CSPETV  101 (112)
T ss_dssp             CCEEEEEEEEEECTTSCEEEE-ECSCCE
T ss_pred             cccccCEEEEEECCCCeEEEe-cCcccc
Confidence            99   7999998766667777 887754