Citrus Sinensis ID: 030467

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------
Protein Sequence
MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKVIVFLFLRISTCKLSK
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccHHHHccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHccccccHHHHHHHHHccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHccccHHHHEEEEEEEEHcHHHccHccHHHHHHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccHHHHHHHHcc
Coil and Loop (DISEMBL)
mhklsrsnrdKLQQFVSITGASEKAALQALKASdwhlegafdvfysqpqsksltdtRHLEELYNrykdpyldmILVDGITLLcndlqvdpqdIVMLVVSWHMKAATMCEFSKQEFigglqslgidsLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKVIVFLFLRISTCKLSK
Flexible Loop (DISEMBL)
mhklsrsnrdklQQFVSITGASEKAALQALKASDWHLEGAFDVfysqpqsksltdtrHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRaelkdeqkFREIYNFAFAWAKEKVIVFLFLRISTCKLSK
Low Complexity Region (SEG)
MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKVIVFLFLRISTCKLSK
Disordered region (IsUnstruct)
************************AALQALKASDWHLEGAFDVFYSQ*****LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKVIVFLFLRISTC****
Disordered Region (DISOPRED)
****************SITGASEKAALQALKASDWHLEGAFDVFYSQPQSK*LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERIS***A*LKDEQKFREIYNFAFAWAKEKVIVFLFLRISTCKLSK
Disordered Region (DISEMBL)
**********KLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKVIVFLFLRISTCKLSK
Disordered Region (DISPRO)
*******NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKVIVFLFLRISTCKLSK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKVIVFLFLRISTCKLSK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	177	2.2.26 [Sep-21-2011]
Q8BZJ7	259	DCN1-like protein 2 OS=Mu	no	no	0.898	0.613	0.427	4e-35
Q96GG9	259	DCN1-like protein 1 OS=Ho	yes	no	0.898	0.613	0.439	6e-35
Q6PH85	259	DCN1-like protein 2 OS=Ho	no	no	0.898	0.613	0.427	2e-34
Q5ZKU1	259	DCN1-like protein 1 OS=Ga	yes	no	0.898	0.613	0.433	2e-34
Q9QZ73	259	DCN1-like protein 1 OS=Mu	no	no	0.898	0.613	0.433	3e-34
Q9VUQ8	288	DCN1-like protein OS=Dros	yes	no	0.903	0.555	0.361	4e-26
A4IHK8	303	DCN1-like protein 3 OS=Xe	no	no	0.853	0.498	0.351	4e-20
Q9U3C8	295	Defective in cullin neddy	yes	no	0.977	0.586	0.315	4e-20
Q8K0V2	304	DCN1-like protein 3 OS=Mu	no	no	0.559	0.325	0.424	3e-19
Q5E9V1	304	DCN1-like protein 3 OS=Bo	no	no	0.615	0.358	0.4	3e-19

>sp|Q8BZJ7|DCNL2_MOUSE DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=2 SV=3

 Score =  147 bits (371), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 108/166 (65%), Gaps = 7/166 (4%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
           MHKL  + +DK++QF++ T ASE+ A+  L  ++W L+ A D F+  P++      KS  
Sbjct: 1   MHKLKSAQKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSV 60

Query: 55  DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           D + LE+LY+RYKDP   + I +DGI   C+DL +DP  I +LV++W  +AAT CEFSK+
Sbjct: 61  DQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKK 120

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
           EF+ G+  LG DS ++ +  +  +  ELKD  KF+++Y F F +AK
Sbjct: 121 EFVDGMTELGCDSTERLKALLPRLEQELKDPAKFKDLYQFTFTFAK 166

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
Mus musculus (taxid: 10090)

>sp|Q96GG9|DCNL1_HUMAN DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=1 SV=1

 Score =  146 bits (369), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 73/166 (43%), Positives = 106/166 (63%), Gaps = 7/166 (4%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
           M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct: 1   MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query: 55  DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           D + LE+LYNRYKDP   + I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQ
Sbjct: 61  DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
           EF+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAK 166

Part of an E3 ubiquitin ligase complex for neddylation. Required for neddylation of cullin components of E3 cullin-RING ubiquitin ligase complexes by enhancing the rate of cullins neddylation. Functions to recruit the NEDD8-charged E2 enzyme to the cullin component. Involved in the release of inhibitory effets of CAND1 on cullin-RING ligase E3 complex assembly and activity. Acts also as an oncogene facilitating malignant transformation and carcinogenic progression.

Homo sapiens (taxid: 9606)

>sp|Q6PH85|DCNL2_HUMAN DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=1 SV=1

 Score =  145 bits (365), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 104/166 (62%), Gaps = 7/166 (4%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
           MHKL  S +DK++QF++ T A E+ A+  L  ++W L+ A D F+  P S      ++  
Sbjct: 1   MHKLKSSQKDKVRQFMACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAV 60

Query: 55  DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           D + LE LY RYKDP   + I VDGI   C+DL +DP  I +LV++W  +AAT CEFS++
Sbjct: 61  DKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRK 120

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
           EF+ G+  LG DS++K +  +  +  ELKD  KF++ Y F F +AK
Sbjct: 121 EFLDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFTFTFAK 166

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Homo sapiens (taxid: 9606)

>sp|Q5ZKU1|DCNL1_CHICK DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE=2 SV=1

 Score =  144 bits (364), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 105/166 (63%), Gaps = 7/166 (4%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
           M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct: 1   MNKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query: 55  DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           D + LE+LYNRYKDP   + I +DGI   C+DL +DP  I +L+++W  +AAT CEFSK 
Sbjct: 61  DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKL 120

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
           EF+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAK 166

Part of an E3 ubiquitin ligase complex for neddylation. Required for neddylation of cullin components of E3 cullin-RING ubiquitin ligase complexes by enhancing the rate of cullins neddylation.

Gallus gallus (taxid: 9031)

>sp|Q9QZ73|DCNL1_MOUSE DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=2 SV=1

 Score =  144 bits (363), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 105/166 (63%), Gaps = 7/166 (4%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
           M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct: 1   MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query: 55  DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           D + LE+LY RYKDP   + I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQ
Sbjct: 61  DRKKLEQLYTRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
           EF+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAK 166

Part of an E3 ubiquitin ligase complex for neddylation. Required for neddylation of cullin components of E3 cullin-RING ubiquitin ligase complexes by enhancing the rate of cullins neddylation. Functions to recruit the NEDD8-charged E2 enzyme to the cullin component. Involved in the release of inhibitory effets of CAND1 on cullin-RING ligase E3 complex assembly and activity. Acts also as an oncogene facilitating malignant transformation and carcinogenic in vivo.

Mus musculus (taxid: 10090)

>sp|Q9VUQ8|DCN1L_DROME DCN1-like protein OS=Drosophila melanogaster GN=CG7427 PE=1 SV=2

 Score =  117 bits (293), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 99/163 (60%), Gaps = 3/163 (1%)

Query: 1   MHKL-SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLT-DTRH 58
           M+KL S ++RDK+++F+S+T   E+ A+  L+ +DW  E A D ++  P+      D + 
Sbjct: 1   MNKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRELDRKR 60

Query: 59  LEELYNRYKDPYLDM-ILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIG 117
           +E+L+ RY+DP   + I   G+     DL + P   ++L+++W   A   CEFS+ EFI 
Sbjct: 61  IEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFIN 120

Query: 118 GLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKE 160
           G+  LGIDS+DK + ++  +  EL D  KF++ Y+F F +AK+
Sbjct: 121 GMCDLGIDSIDKLKTKLPILEQELNDAGKFKDFYHFTFNYAKD 163

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Drosophila melanogaster (taxid: 7227)

>sp|A4IHK8|DCNL3_XENTR DCN1-like protein 3 OS=Xenopus tropicalis GN=dcun1d3 PE=2 SV=1

 Score = 97.4 bits (241), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 87/162 (53%), Gaps = 11/162 (6%)

Query: 2   HKLSRSNRDKLQQFVSITG-ASEKAALQALKASDWHLE-------GAFDVFYSQPQSKSL 53
           HK S S++D   + +SI G AS +  +   K  D  LE       G       Q     L
Sbjct: 28  HKRSSSHKD---EHLSICGKASREILVNGTKKGDVSLEASQPLAAGGDTKKKEQGTGAEL 84

Query: 54  TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           +  + +EEL+ RYKD   D IL +G+   CNDL VDP +  +LV++W  +AATMC+F+++
Sbjct: 85  SSVQRIEELFWRYKDEREDAILEEGMERFCNDLYVDPTEFRVLVLAWKFQAATMCKFTRR 144

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAF 155
           EF  G +++  D ++    R   +  E K E KF+++Y F F
Sbjct: 145 EFFEGCKAINADGIEGICARFPSLLNEAKQEDKFKDLYRFTF 186

Xenopus tropicalis (taxid: 8364)

>sp|Q9U3C8|DCN1_CAEEL Defective in cullin neddylation protein 1 OS=Caenorhabditis elegans GN=dcn-1 PE=1 SV=2

 Score = 97.4 bits (241), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 96/184 (52%), Gaps = 11/184 (5%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
           M++L    + KL+QFV  T  +E  +L  L  ++W++E A  +++  P        +   
Sbjct: 1   MNRLKSDQKTKLRQFVQWTQVTEAVSLNFLAKANWNIEYAMTLYFDNPNLFAGSTPQPSV 60

Query: 55  DTRHLEELYNRYKDPYLDM----ILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEF 110
           D  ++E L+N+Y DP   +    +   GI  L  DL  +  D  +LV++W   A T CEF
Sbjct: 61  DRSNIERLFNQYVDPKDKVGEKRMGPHGINRLLTDLGYEATDRRVLVLAWKFTAQTQCEF 120

Query: 111 SKQEFIGGLQSLGIDSLDKFRERISFMRAELK-DEQKFREIYNFAFAWAKEKVIVFLFLR 169
           S  E++ G+ +L  D++   R+RI  + + L+ D+ KF E+Y FAF +AK      L L 
Sbjct: 121 SLDEWVKGMTALQADTVQNLRQRIDSINSGLESDKAKFHELYLFAFNYAKSAACRNLDLE 180

Query: 170 ISTC 173
            + C
Sbjct: 181 TAIC 184

Required for neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. Does not act by preventing deneddylation, but rather facilitates neddylation, possibly by acting with rbx-1 to recruit the Nedd8-charged E2 enzyme to the cullin component of SCF-type complexes.

Caenorhabditis elegans (taxid: 6239)

>sp|Q8K0V2|DCNL3_MOUSE DCN1-like protein 3 OS=Mus musculus GN=Dcun1d3 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 64/99 (64%)

Query: 57  RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
           + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF 
Sbjct: 89  QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148

Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAF 155
            G +++  DS+D    R   +  E K E KF+++Y F F
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTF 187

Mus musculus (taxid: 10090)

>sp|Q5E9V1|DCNL3_BOVIN DCN1-like protein 3 OS=Bos taurus GN=DCUN1D3 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 70/110 (63%), Gaps = 1/110 (0%)

Query: 47  QPQSKSLTDT-RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA 105
           +P+S +   + + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AA
Sbjct: 78  EPKSNAEESSLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAA 137

Query: 106 TMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAF 155
           TMC+F+++EF  G +++  DS+D    R   +  E K E KF+++Y F F
Sbjct: 138 TMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTF 187

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
255555594	261	Defective in cullin neddylation protein,	0.909	0.616	0.900	3e-83
224098848	259	predicted protein [Populus trichocarpa]	0.909	0.621	0.857	5e-81
297736127	309	unnamed protein product [Vitis vinifera]	0.909	0.521	0.850	6e-79
359494685	259	PREDICTED: DCN1-like protein 2-like [Vit	0.909	0.621	0.850	8e-79
356525740	259	PREDICTED: DCN1-like protein 2-like [Gly	0.909	0.621	0.844	1e-77
343171976	249	hypothetical protein, partial [Silene la	0.909	0.646	0.857	1e-77
356557032	259	PREDICTED: uncharacterized protein LOC10	0.909	0.621	0.838	2e-77
343171974	249	hypothetical protein, partial [Silene la	0.909	0.646	0.857	3e-77
449519908	259	PREDICTED: DCN1-like protein 2-like [Cuc	0.909	0.621	0.832	1e-76
388500426	259	unknown [Lotus japonicus]	0.909	0.621	0.826	8e-76

>gi|255555594|ref|XP_002518833.1| Defective in cullin neddylation protein, putative [Ricinus communis] gi|223542006|gb|EEF43551.1| Defective in cullin neddylation protein, putative [Ricinus communis]

 Score =  312 bits (800), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 145/161 (90%), Positives = 155/161 (96%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL+R NRDK+QQF++ITGASEKAALQALKASDWHLEGAFDVFYS PQ K+ TD+RHLE
Sbjct: 1   MHKLTRGNRDKVQQFMTITGASEKAALQALKASDWHLEGAFDVFYSHPQIKTFTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKDPY+DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ
Sbjct: 61  ELYNRYKDPYVDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEK 161
           +LGIDSL+KFRERI FMR+ELKDEQKFREIYNFAF WAKEK
Sbjct: 121 ALGIDSLEKFRERIPFMRSELKDEQKFREIYNFAFGWAKEK 161

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098848|ref|XP_002311289.1| predicted protein [Populus trichocarpa] gi|222851109|gb|EEE88656.1| predicted protein [Populus trichocarpa]

 Score =  305 bits (781), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 138/161 (85%), Positives = 153/161 (95%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL+R NR+K+QQF+SITG SEK A+QALKASDWHLEGAFD FYSQPQS++ TD+RHLE
Sbjct: 1   MHKLNRGNREKVQQFMSITGTSEKVAVQALKASDWHLEGAFDAFYSQPQSRTYTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKDPY+DM+LVDGIT+LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ
Sbjct: 61  ELYNRYKDPYVDMVLVDGITILCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEK 161
           SLG+DSLDKFRE+I +MR+EL DEQKFREIYNFAF WAKEK
Sbjct: 121 SLGVDSLDKFREKIPYMRSELMDEQKFREIYNFAFGWAKEK 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297736127|emb|CBI24165.3| unnamed protein product [Vitis vinifera]

 Score =  298 bits (763), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 137/161 (85%), Positives = 150/161 (93%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL R +RDK+QQF++ITGASEK AL ALKASDWHLEGAFDVFYSQPQ K+ TD+RHLE
Sbjct: 43  MHKLGRGHRDKVQQFMAITGASEKVALHALKASDWHLEGAFDVFYSQPQIKAFTDSRHLE 102

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELY+RYKDPY+DMI+ DGI++LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI GLQ
Sbjct: 103 ELYSRYKDPYVDMIMADGISVLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFISGLQ 162

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEK 161
           +LGIDSL+KFRERI FMR ELKDEQKFREIYNFAF WAKEK
Sbjct: 163 ALGIDSLEKFRERIQFMRTELKDEQKFREIYNFAFGWAKEK 203

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494685|ref|XP_002263696.2| PREDICTED: DCN1-like protein 2-like [Vitis vinifera]

 Score =  298 bits (762), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 137/161 (85%), Positives = 150/161 (93%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL R +RDK+QQF++ITGASEK AL ALKASDWHLEGAFDVFYSQPQ K+ TD+RHLE
Sbjct: 1   MHKLGRGHRDKVQQFMAITGASEKVALHALKASDWHLEGAFDVFYSQPQIKAFTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELY+RYKDPY+DMI+ DGI++LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI GLQ
Sbjct: 61  ELYSRYKDPYVDMIMADGISVLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFISGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEK 161
           +LGIDSL+KFRERI FMR ELKDEQKFREIYNFAF WAKEK
Sbjct: 121 ALGIDSLEKFRERIQFMRTELKDEQKFREIYNFAFGWAKEK 161

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525740|ref|XP_003531481.1| PREDICTED: DCN1-like protein 2-like [Glycine max]

 Score =  293 bits (751), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 136/161 (84%), Positives = 149/161 (92%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL R +RDKLQQF++ITGASEK ALQALKASDWHLEGAFD FYSQPQ K+ TD+RHLE
Sbjct: 1   MHKLGRGHRDKLQQFITITGASEKLALQALKASDWHLEGAFDFFYSQPQLKTFTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKD Y+DMIL DGITLLCND+QVDPQDIVMLV+SWHMKA TMCEFSK+EFI GLQ
Sbjct: 61  ELYNRYKDAYVDMILADGITLLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEK 161
           SLGIDSL+KFRE+I +MR+ELKDEQKFREIYNFAF WAKEK
Sbjct: 121 SLGIDSLEKFREKIPYMRSELKDEQKFREIYNFAFGWAKEK 161

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343171976|gb|AEL98692.1| hypothetical protein, partial [Silene latifolia]

 Score =  293 bits (751), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 138/161 (85%), Positives = 147/161 (91%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           M KL R +R+KLQQF++IT ASEK ALQ LKASDWHLEGAFDVFYSQPQ KS TDTRHLE
Sbjct: 1   MSKLGRGHREKLQQFMAITAASEKVALQTLKASDWHLEGAFDVFYSQPQIKSFTDTRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKDPY DMIL DGITLLCNDLQVDPQDIVMLV+SWHMKAATMCEFSKQEFIGG Q
Sbjct: 61  ELYNRYKDPYADMILADGITLLCNDLQVDPQDIVMLVISWHMKAATMCEFSKQEFIGGWQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEK 161
           SLGIDSL+KFRERI ++R+ELKDEQKFREIY FAF WAKEK
Sbjct: 121 SLGIDSLEKFRERIPYIRSELKDEQKFREIYIFAFGWAKEK 161

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557032|ref|XP_003546822.1| PREDICTED: uncharacterized protein LOC100527072 [Glycine max]

 Score =  293 bits (750), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 135/161 (83%), Positives = 149/161 (92%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL R +RDKLQQF++ITGASEK ALQALKASDWHLEGAFD FY+QPQ K+ TD+RHLE
Sbjct: 1   MHKLGRGHRDKLQQFITITGASEKIALQALKASDWHLEGAFDFFYNQPQLKTFTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKD Y+DMIL DGIT+LCND+QVDPQDIVMLV+SWHMKA TMCEFSK+EFI GLQ
Sbjct: 61  ELYNRYKDAYVDMILADGITVLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEK 161
           SLGIDSLDKFRE+I +MR+ELKDEQKFREIYNFAF WAKEK
Sbjct: 121 SLGIDSLDKFREKIPYMRSELKDEQKFREIYNFAFGWAKEK 161

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343171974|gb|AEL98691.1| hypothetical protein, partial [Silene latifolia]

 Score =  292 bits (748), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 138/161 (85%), Positives = 147/161 (91%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           M KL R +R+KLQQF++IT ASEK ALQ LKASDWHLEGAFDVFYSQPQ KS TDTRHLE
Sbjct: 1   MSKLGRGHREKLQQFMAITAASEKVALQTLKASDWHLEGAFDVFYSQPQIKSFTDTRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           E YNRYKDPY DMILVDGITLLCNDLQVDPQDIVMLV+SWHMKAATMCEFSKQEFIGG Q
Sbjct: 61  EHYNRYKDPYADMILVDGITLLCNDLQVDPQDIVMLVISWHMKAATMCEFSKQEFIGGWQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEK 161
           SLGIDSL+KFRERI ++R+ELKDEQKFREIY FAF WAKEK
Sbjct: 121 SLGIDSLEKFRERIPYIRSELKDEQKFREIYIFAFGWAKEK 161

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449519908|ref|XP_004166976.1| PREDICTED: DCN1-like protein 2-like [Cucumis sativus]

 Score =  291 bits (744), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 134/161 (83%), Positives = 149/161 (92%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL+R +RDKL QF++ITG SEK A QALKASDWHLEGAFDVFYSQPQ K+ TD+RHLE
Sbjct: 1   MHKLTRGHRDKLHQFMAITGTSEKVAHQALKASDWHLEGAFDVFYSQPQIKAFTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKD Y+DMIL DGI+LLC+DLQVDPQDIVMLVVSWHMKA TMCEFSKQEFIGGLQ
Sbjct: 61  ELYNRYKDSYVDMILADGISLLCDDLQVDPQDIVMLVVSWHMKANTMCEFSKQEFIGGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEK 161
           +LGIDSL++FRERI +MR+ELKD+QKFREIYNFAF WAKEK
Sbjct: 121 ALGIDSLERFRERIPYMRSELKDDQKFREIYNFAFGWAKEK 161

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500426|gb|AFK38279.1| unknown [Lotus japonicus]

 Score =  288 bits (736), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 133/161 (82%), Positives = 149/161 (92%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL R +RDKLQQF++ITGASEK ALQ+LKASDWHLEGAFD FYSQPQ K+ TD+RHLE
Sbjct: 1   MHKLGRGHRDKLQQFITITGASEKVALQSLKASDWHLEGAFDFFYSQPQLKASTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKD Y+DMIL DGITLLCND+QVDPQDIVMLV+SWHMKA TMCEFSK+EFI GLQ
Sbjct: 61  ELYNRYKDQYVDMILADGITLLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEK 161
           SLGIDSL+KFRE+I +MR+ELKDE KFR+IYNFAF+WAKEK
Sbjct: 121 SLGIDSLEKFREKIPYMRSELKDEYKFRDIYNFAFSWAKEK 161

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
TAIR|locus:2087720	250	AT3G12760 "AT3G12760" [Arabido	0.909	0.644	0.777	3.6e-66
MGI|MGI:2142792	259	Dcun1d2 "DCN1, defective in cu	0.898	0.613	0.427	2.2e-34
ZFIN|ZDB-GENE-030131-5443	282	dcun1d1 "DCN1, defective in cu	0.898	0.563	0.448	4.6e-34
UNIPROTKB|Q96GG9	259	DCUN1D1 "DCN1-like protein 1"	0.898	0.613	0.439	5.8e-34
UNIPROTKB|I3L7H0	259	DCUN1D1 "Uncharacterized prote	0.898	0.613	0.439	5.8e-34
UNIPROTKB|Q5ZKU1	259	DCUN1D1 "DCN1-like protein 1"	0.898	0.613	0.433	2e-33
UNIPROTKB|E2QV42	262	DCUN1D1 "Uncharacterized prote	0.892	0.603	0.436	2e-33
UNIPROTKB|F1NPG9	258	DCUN1D1 "DCN1-like protein 1"	0.892	0.612	0.430	6.7e-33
UNIPROTKB|F1MDM6	244	DCUN1D1 "Uncharacterized prote	0.796	0.577	0.432	7.1e-29
ZFIN|ZDB-GENE-040625-171	204	dcun1d2 "DCN1, defective in cu	0.615	0.534	0.472	8.7e-24

TAIR|locus:2087720 AT3G12760 "AT3G12760" [Arabidopsis thaliana (taxid:3702)]

 Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
 Identities = 126/162 (77%), Positives = 143/162 (88%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKS-LTDTRHL 59
             MHKLSRSNRDKLQQFV+ITGASEK ALQALKASDWHLE AFDVFYSQPQ +S   + R L
Sbjct:     1 MHKLSRSNRDKLQQFVAITGASEKNALQALKASDWHLEAAFDVFYSQPQPRSNAAEVRRL 60

Query:    60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119
             EELYNRYKDPY DMIL +GI++LCNDL+V+PQDIV LV+SWHM AAT CEFS+QEFI GL
Sbjct:    61 EELYNRYKDPYSDMILAEGISVLCNDLEVEPQDIVTLVLSWHMNAATACEFSRQEFISGL 120

Query:   120 QSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEK 161
             Q+LG+DS+ K +E++ FMR+ELKDEQKF EIYNFAF WAKEK
Sbjct:   121 QALGVDSIGKLQEKLPFMRSELKDEQKFHEIYNFAFGWAKEK 162

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

MGI|MGI:2142792 Dcun1d2 "DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 71/166 (42%), Positives = 108/166 (65%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
             MHKL  + +DK++QF++ T ASE+ A+  L  ++W L+ A D F+  P++      KS  
Sbjct:     1 MHKLKSAQKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSV 60

Query:    55 DTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
             D + LE+LY+RYKDP  +  I +DGI   C+DL +DP  I +LV++W  +AAT CEFSK+
Sbjct:    61 DQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKK 120

Query:   114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
             EF+ G+  LG DS ++ +  +  +  ELKD  KF+++Y F F +AK
Sbjct:   121 EFVDGMTELGCDSTERLKALLPRLEQELKDPAKFKDLYQFTFTFAK 166

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-030131-5443 dcun1d1 "DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 74/165 (44%), Positives = 107/165 (64%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP----QS-KSLTD 55
             M+KL  S +DK++QF+  T ++EK AL  L  +DW L+ A D F+  P    Q+ K   D
Sbjct:    26 MNKLKSSQKDKVRQFMIFTQSNEKTALNCLSQNDWKLDVATDNFFQHPDLYVQNLKGTLD 85

Query:    56 TRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQE 114
              + LE+LYNRY+DP  D  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQE
Sbjct:    86 RKKLEQLYNRYRDPQDDNKIGIDGIQQFCDDLGLDPASISVLLIAWKFRAATQCEFSKQE 145

Query:   115 FIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
             F+ G+   G DS++K + ++  M  ELKD+ KF++ Y F F +AK
Sbjct:   146 FMEGMAEQGCDSIEKLKAQLPRMEQELKDQGKFKDFYQFTFNFAK 190

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q96GG9 DCUN1D1 "DCN1-like protein 1" [Homo sapiens (taxid:9606)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 73/166 (43%), Positives = 106/166 (63%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
             M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct:     1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query:    55 DTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
             D + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQ
Sbjct:    61 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120

Query:   114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
             EF+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK
Sbjct:   121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAK 166

GO:0008150 "biological_process" evidence=ND

GO:0000151 "ubiquitin ligase complex" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|I3L7H0 DCUN1D1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 73/166 (43%), Positives = 106/166 (63%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
             M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct:     1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query:    55 DTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
             D + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQ
Sbjct:    61 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120

Query:   114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
             EF+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK
Sbjct:   121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAK 166

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|Q5ZKU1 DCUN1D1 "DCN1-like protein 1" [Gallus gallus (taxid:9031)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 72/166 (43%), Positives = 105/166 (63%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
             M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct:     1 MNKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query:    55 DTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
             D + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSK 
Sbjct:    61 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKL 120

Query:   114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
             EF+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK
Sbjct:   121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAK 166

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|E2QV42 DCUN1D1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 72/165 (43%), Positives = 105/165 (63%)

Query:     2 HKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTD 55
             +KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   D
Sbjct:     5 NKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLD 64

Query:    56 TRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQE 114
              + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQE
Sbjct:    65 RKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQE 124

Query:   115 FIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
             F+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK
Sbjct:   125 FMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAK 169

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|F1NPG9 DCUN1D1 "DCN1-like protein 1" [Gallus gallus (taxid:9031)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 71/165 (43%), Positives = 104/165 (63%)

Query:     2 HKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTD 55
             +KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   D
Sbjct:     1 NKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLD 60

Query:    56 TRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQE 114
              + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSK E
Sbjct:    61 RKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKLE 120

Query:   115 FIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
             F+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK
Sbjct:   121 FMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAK 165

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|F1MDM6 DCUN1D1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 64/148 (43%), Positives = 93/148 (62%)

Query:    19 TGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD 72
             T +SEK A+  L  +DW L+ A D F+  P+       K   D + LE+LY+RYKDP  +
Sbjct:     4 TQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYSRYKDPQDE 63

Query:    73 -MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
               I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF+ G+  LG DS++K +
Sbjct:    64 NKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLK 123

Query:   132 ERISFMRAELKDEQKFREIYNFAFAWAK 159
              +I  M  ELK+  +F++ Y F F +AK
Sbjct:   124 AQIPKMEQELKEPGRFKDFYQFTFNFAK 151

GO:0000151 "ubiquitin ligase complex" evidence=IEA

ZFIN|ZDB-GENE-040625-171 dcun1d2 "DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 52/110 (47%), Positives = 73/110 (66%)

Query:    51 KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCE 109
             K+  D R L+ LY+RYKDP  +  I VDGI   C+DL +DP  + +L+V+W  +AAT CE
Sbjct:     2 KTAVDRRKLDLLYSRYKDPQDENKIGVDGIQQFCDDLMLDPASVSVLIVAWKFRAATQCE 61

Query:   110 FSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
             FS+QEF+ G+  LG DS +K +  +  +  ELKD  KFR+ Y F F++AK
Sbjct:    62 FSRQEFLDGMTDLGCDSPEKLKSLLPRLEQELKDSGKFRDFYRFTFSFAK 111

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_kg.C_LG_VIII0041 hypothetical protein (259 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	177
pfam03556	117	pfam03556, Cullin_binding, Cullin binding	1e-05

>gnl|CDD|217613 pfam03556, Cullin_binding, Cullin binding

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 13/36 (36%), Positives = 27/36 (75%), Gaps = 1/36 (2%)

Query: 127 LDKFRERISFMRAELK-DEQKFREIYNFAFAWAKEK 161
           ++K + ++  +R+ELK D +KF+++Y F F +A+E+
Sbjct: 1   IEKLKAKLPELRSELKSDPEKFKDLYRFTFDFAREE 36

This domain binds to cullins and to Rbx-1, components of an E3 ubiquitin ligase complex for neddylation. Neddylation is the process by which the C-terminal glycine of the ubiquitin-like protein Nedd8 is covalently linked to lysine residues in a protein through an isopeptide bond. The structure of this domain is composed entirely of alpha helices. Length = 117

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	177
KOG3077	260	consensus Uncharacterized conserved protein [Funct	100.0
PF03556	117	Cullin_binding: Cullin binding; InterPro: IPR00517	99.52
PF14555	43	UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A	99.41
smart00804	63	TAP_C C-terminal domain of vertebrate Tap protein.	97.92
PF03943	51	TAP_C: TAP C-terminal domain; InterPro: IPR005637	97.77
KOG1364	356	consensus Predicted ubiquitin regulatory protein,	97.1
PF00627	37	UBA: UBA/TS-N domain; InterPro: IPR000449 UBA doma	96.75
smart00165	37	UBA Ubiquitin associated domain. Present in Rad23,	95.59
cd00194	38	UBA Ubiquitin Associated domain. The UBA domain is	95.42
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	94.87
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	94.26
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	94.08
PTZ00184	149	calmodulin; Provisional	93.29
PTZ00183	158	centrin; Provisional	93.21
PTZ00183	158	centrin; Provisional	93.19
KOG2086	380	consensus Protein tyrosine phosphatase SHP1/Cofact	93.14
cd00052	67	EH Eps15 homology domain; found in proteins implic	93.08
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	92.4
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	92.33
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	92.19
PTZ00184	149	calmodulin; Provisional	91.38
TIGR00264	116	alpha-NAC-related protein. This hypothetical prote	90.97
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	90.92
PRK06369	115	nac nascent polypeptide-associated complex protein	90.68
KOG4351	244	consensus Uncharacterized conserved protein [Funct	90.63
TIGR01446	73	DnaD_dom DnaD and phage-associated domain. This mo	89.49
cd00213	88	S-100 S-100: S-100 domain, which represents the la	89.13
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	88.66
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	86.67
PF09279	83	EF-hand_like: Phosphoinositide-specific phospholip	86.2
KOG2756	349	consensus Predicted Mg2+-dependent phosphodiestera	85.94
KOG0036	463	consensus Predicted mitochondrial carrier protein	85.89
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	85.31
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	83.68
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	83.31
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	83.13
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	82.37
KOG4199	461	consensus Uncharacterized conserved protein [Funct	80.31
smart00546	43	CUE Domain that may be involved in binding ubiquit	80.11

>KOG3077 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=4.7e-48  Score=324.50  Aligned_cols=176  Identities=46%  Similarity=0.806  Sum_probs=166.3

Q ss_pred             CCCCCccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCcccc-chhhccccCC------CCcCCHHHHHHHHHHhcCCCC-C
Q 030467            1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGA-FDVFYSQPQS------KSLTDTRHLEELYNRYKDPYL-D   72 (177)
Q Consensus         1 m~~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A-~~~ff~~~~~------~~~~~~~~l~~lF~~Y~d~~~-d   72 (177)
                      |++|+..+++.+++|+.+|+.++.+++.+|++++|+++.| .+.||.++..      ..+.+.+.+.++|.+|+||+. +
T Consensus         1 mnklk~~~~d~~~~~~~~~~~~~~~s~~~~~~~dw~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~l~~~f~~y~d~~d~~   80 (260)
T KOG3077|consen    1 MNKLKSSQKDKFEQFMSFTASRKKTSLSCLAACDWNLKYAFNDSYYTNPQSLREESVQARVSEKRLEELFNQYKDPDDDN   80 (260)
T ss_pred             CCccchhHHHHHHhhcccccccchhhhhhhcccccccchhcccchhcchhHHHHhhhhccccHHHHHHHHHHhcCccccc
Confidence            8999999999999999999999999999999999999999 6666666643      245678999999999999976 5


Q ss_pred             ccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCCCcHHHHHHHHHHHHHHccChhHHHHHHH
Q 030467           73 MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYN  152 (177)
Q Consensus        73 ~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~dsl~~lk~~l~~l~~~l~~~~~Fk~iY~  152 (177)
                      .|++||+.+||+||||+|+|+++|||||+|+|++||+|||++|+.||.++||||+++|+..|+.++..|+|.+.||.||+
T Consensus        81 ~i~~dgi~~fc~dlg~~p~~i~~LvlAwkl~A~~m~~Fsr~ef~~g~~~l~~dS~d~lq~~l~~l~~~l~d~~~Fk~iY~  160 (260)
T KOG3077|consen   81 LIGPDGIEKFCEDLGVEPEDISVLVLAWKLGAATMCEFSREEFLKGMTALGCDSIDKLQQRLDFLRSVLKDLEKFKSIYR  160 (260)
T ss_pred             ccChHHHHHHHHHhCCCchhHHHHHHHHHhccchhhhhhHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHccHHHhhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998889999999


Q ss_pred             HHhhhhhccCCcccChHhHHhhhh
Q 030467          153 FAFAWAKEKVIVFLFLRISTCKLS  176 (177)
Q Consensus       153 ftF~f~~~~gqk~L~le~A~~~~~  176 (177)
                      |||+|++++|||+|+++|||+||.
T Consensus       161 faf~fa~e~~qk~Ld~~~ai~~w~  184 (260)
T KOG3077|consen  161 FAFNFAKEPGQKSLDLETAISLWK  184 (260)
T ss_pred             hhhhhccCcCcCcCCHHHHHHHHH
Confidence            999999999999999999999985

>PF03556 Cullin_binding: Cullin binding; InterPro: IPR005176 The eukaryotic defective in cullin neddylation (DCN) protein family, may contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes

Probab=99.52  E-value=1e-14  Score=110.40  Aligned_cols=50  Identities=28%  Similarity=0.535  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHHHHHcc-ChhHHHHHHHHHhhhhhccCCcccChHhHHhhhh
Q 030467          127 LDKFRERISFMRAELK-DEQKFREIYNFAFAWAKEKVIVFLFLRISTCKLS  176 (177)
Q Consensus       127 l~~lk~~l~~l~~~l~-~~~~Fk~iY~ftF~f~~~~gqk~L~le~A~~~~~  176 (177)
                      |++||++|++|+++|. ++..||+||+|||+|+|++|||+|++|+|+++|.
T Consensus         1 I~~lk~~l~~l~~~l~~d~~~F~~~Y~f~F~~~~~~~qr~l~~e~Ai~~W~   51 (117)
T PF03556_consen    1 IDKLKQKLPELRKELRSDPEYFKKFYRFTFDFAREEGQRSLPLETAIAYWR   51 (117)
T ss_dssp             HHHHHHCHHHHHHHCCHSHHHHHHHHHHHHHHHS-TT-SSEEHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHhCCcccCCCCHHHHHHHHH
Confidence            7899999999999998 7778999999999999999999999999999985

These multi-protein complexes are required for polyubiquitination and subsequent degradation of target proteins by the 26S proteasome []. Proteins in the DCN family include: Yeast DCN1. Vertebrate DCN1-like protein 1. Vertebrate DCN1-like protein 2. Vertebrate DCN1-like protein 4. This entry represents a domain found within DCN family proteins. Its function is unknown but it has been suggested that it has the features of a basic helix-loop-helix leucine zipper (bHLH-ZIP) domain [].It is often found in association with a UBA-like domain (IPR009060 from INTERPRO).; PDB: 3TDI_A 2IS9_A 3O6B_E 3O2P_A 3BQ3_A 3TDZ_A 3TDU_B.

>PF14555 UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A 2L4F_A 2DZL_A 2L2D_A 2DAM_A 1V92_A 3E21_A

Probab=99.41  E-value=1.4e-13  Score=86.69  Aligned_cols=41  Identities=41%  Similarity=0.793  Sum_probs=36.2

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccccC
Q 030467            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~   49 (177)
                      +++|++|+++||+++.+|++||+.++|||+.||+.||+++.
T Consensus         1 ~e~i~~F~~iTg~~~~~A~~~L~~~~wdle~Av~~y~~~~~   41 (43)
T PF14555_consen    1 DEKIAQFMSITGADEDVAIQYLEANNWDLEAAVNAYFDDGE   41 (43)
T ss_dssp             HHHHHHHHHHH-SSHHHHHHHHHHTTT-HHHHHHHHHHSS-
T ss_pred             CHHHHHHHHHHCcCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999999999764

>smart00804 TAP_C C-terminal domain of vertebrate Tap protein

Probab=97.92  E-value=1.2e-05  Score=54.65  Aligned_cols=44  Identities=25%  Similarity=0.449  Sum_probs=41.3

Q ss_pred             CCCccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcc
Q 030467            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS   46 (177)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~   46 (177)
                      .+++.|.++|.+|...||.+..-++.+|+.+|||++.|+..|=+
T Consensus         7 ~~~~~q~~~v~~~~~~Tgmn~~~s~~cLe~~~Wd~~~Al~~F~~   50 (63)
T smart00804        7 TLSPEQQEMVQAFSAQTGMNAEYSQMCLEDNNWDYERALKNFTE   50 (63)
T ss_pred             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            47788999999999999999999999999999999999999955

The vertebrate Tap protein is a member of the NXF family of shuttling transport receptors for the nuclear export of mRNA. Its most C-terminal domain is important for binding to FG repeat-containing nuclear pore proteins (FG-nucleoporins) and is sufficient to mediate shuttling. This domain forms a compact four-helix fold related to that of a UBA domain.

>PF03943 TAP_C: TAP C-terminal domain; InterPro: IPR005637 This entry contains the NXF family of shuttling transport receptors for nuclear export of mRNA, which include: vertebrate mRNA export factor TAP or nuclear RNA export factor 1 (NXF1)

Probab=97.77  E-value=1.5e-05  Score=52.00  Aligned_cols=40  Identities=25%  Similarity=0.424  Sum_probs=34.8

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      +++|.+|...||.+..-|..||+.++||++.|+..|-...
T Consensus         1 q~mv~~~s~~Tgmn~~~s~~CL~~n~Wd~~~A~~~F~~l~   40 (51)
T PF03943_consen    1 QEMVQQFSQQTGMNLEWSQKCLEENNWDYERALQNFEELK   40 (51)
T ss_dssp             HHHHHHHHHHCSS-CCHHHHHHHHTTT-CCHHHHHHHHCC
T ss_pred             CHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999997554

Caenorhabditis elegans nuclear RNA export factor 1 (nxf-1). yeast mRNA export factor MEX67. Members of the NXF family have a modular structure. A nuclear localization sequence and a noncanonical RNA recognition motif (RRM) (see PDOC00030 from PROSITEDOC) followed by four LRR repeats are located in its N-terminal half. The C-terminal half contains a NTF2 domain (see PDOC50177 from PROSITEDOC) followed by a second domain, TAP-C. The TAP-C domain is important for binding to FG repeat-containing nuclear pore proteins (FG-nucleoporins) and is sufficient to mediate nuclear shuttling [,]. The Tap-C domain is made of four alpha helices packed against each other. The arrangement of helices 1, 2 and 3 is similar to that seen in a UBA fold. and is joined to the next module by flexible 12-residue Pro-rich linker [, ].; GO: 0051028 mRNA transport, 0005634 nucleus; PDB: 1OAI_A 1GO5_A 2KHH_A 2JP7_A.

>KOG1364 consensus Predicted ubiquitin regulatory protein, contains UAS and UBX domains [Posttranslational modification, protein turnover, chaperones]

Probab=97.10  E-value=0.00036  Score=61.60  Aligned_cols=44  Identities=32%  Similarity=0.583  Sum_probs=40.4

Q ss_pred             CccHHHHHHHHHHhhC-CCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            5 SRSNRDKLQQFVSITG-ASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         5 ~~~q~~~i~~F~~~T~-~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      +.++.++|.+|+.||+ .+.+.|++||+..+|+++.|++-||.+.
T Consensus         3 ~~~~~~lv~~fl~It~~~t~e~A~q~L~~~~~~le~ai~Lffe~~   47 (356)
T KOG1364|consen    3 TGAQRALVSKFLAITVQQTVEIATQYLSAADWDLEAAINLFFEHG   47 (356)
T ss_pred             cchHHHHHHHHHHHhccccHHHHHHHHHhcCCcHHHHHHHHHHhc
Confidence            4568899999999999 6799999999999999999999999874

>PF00627 UBA: UBA/TS-N domain; InterPro: IPR000449 UBA domains are a commonly occurring sequence motif of approximately 45 amino acid residues that are found in diverse proteins involved in the ubiquitin/proteasome pathway, DNA excision-repair, and cell signalling via protein kinases []

Probab=96.75  E-value=0.002  Score=38.80  Aligned_cols=33  Identities=36%  Similarity=0.528  Sum_probs=29.9

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCCCCccccch
Q 030467            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFD   42 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~   42 (177)
                      .+.|++.+++ |.++..|++.|+.++||++.|++
T Consensus         3 ~~~v~~L~~m-Gf~~~~~~~AL~~~~~nve~A~~   35 (37)
T PF00627_consen    3 EEKVQQLMEM-GFSREQAREALRACNGNVERAVD   35 (37)
T ss_dssp             HHHHHHHHHH-TS-HHHHHHHHHHTTTSHHHHHH
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHH
Confidence            5679999999 99999999999999999999986

The human homologue of yeast Rad23A is one example of a nucleotide excision-repair protein that contains both an internal and a C-terminal UBA domain. The solution structure of human Rad23A UBA(2) showed that the domain forms a compact three-helix bundle []. Comparison of the structures of UBA(1) and UBA(2) reveals that both form very similar folds and have a conserved large hydrophobic surface patch which may be a common protein-interacting surface present in diverse UBA domains. Evidence that ubiquitin binds to UBA domains leads to the prediction that the hydrophobic surface patch of UBA domains interacts with the hydrophobic surface on the five-stranded beta-sheet of ubiquitin []. This domain is similar in sequence to the N-terminal domain of translation elongation factor EF1B (or EF-Ts) from bacteria, mitochondria and chloroplasts. More information about EF1B (EF-Ts) proteins can be found at Protein of the Month: Elongation Factors [].; GO: 0005515 protein binding; PDB: 2DAI_A 2OO9_C 2JUJ_A 1WHC_A 1YLA_A 2O25_B 3K9O_A 3K9P_A 3F92_A 3E46_A ....

>smart00165 UBA Ubiquitin associated domain

Probab=95.59  E-value=0.017  Score=34.32  Aligned_cols=35  Identities=31%  Similarity=0.527  Sum_probs=30.0

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhh
Q 030467            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVF   44 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~f   44 (177)
                      .+.|.+++++ |.++..|++.|+.++||++.|++-.
T Consensus         2 ~~~v~~L~~m-Gf~~~~a~~aL~~~~~d~~~A~~~L   36 (37)
T smart00165        2 EEKIDQLLEM-GFSREEALKALRAANGNVERAAEYL   36 (37)
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHH
Confidence            3567788776 9999999999999999999998643

Present in Rad23, SNF1-like kinases. The newly-found UBA in p62 is known to bind ubiquitin.

>cd00194 UBA Ubiquitin Associated domain

Probab=95.42  E-value=0.021  Score=34.08  Aligned_cols=35  Identities=31%  Similarity=0.471  Sum_probs=30.3

Q ss_pred             HHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhc
Q 030467           10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (177)
Q Consensus        10 ~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff   45 (177)
                      +.|.++++ .|.++..|+..|+.++||++.|++-.|
T Consensus         3 ~~v~~L~~-mGf~~~~~~~AL~~~~~d~~~A~~~L~   37 (38)
T cd00194           3 EKLEQLLE-MGFSREEARKALRATNNNVERAVEWLL   37 (38)
T ss_pred             HHHHHHHH-cCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence            56788887 499999999999999999999987654

The UBA domain is a commonly occurring sequence motif in some members of the ubiquitination pathway, UV excision repair proteins, and certain protein kinases. Although its specific role is so far unknown, it has been suggested that UBA domains are involved in conferring protein target specificity. The domain, a compact three helix bundle, has a conserved GFP-loop and the proline is thought to be critical for binding. The UBA domain is distinct from the conserved three helical domain seen in the N-terminus of EF-TS and eukaryotic NAC proteins.

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=94.87  E-value=0.19  Score=30.71  Aligned_cols=61  Identities=11%  Similarity=0.073  Sum_probs=50.1

Q ss_pred             HHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhh
Q 030467           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (177)
Q Consensus        59 l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~  119 (177)
                      +..+|..|....++.|..+-+...+..+|..+.+..+-.+..++....-|.++-++|+..+
T Consensus         2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~   62 (63)
T cd00051           2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM   62 (63)
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence            5678888865445689999999999999998887777777888888888999999998654

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=94.26  E-value=0.19  Score=35.75  Aligned_cols=68  Identities=13%  Similarity=0.167  Sum_probs=54.0

Q ss_pred             HHHHHHHHHhcC-CC-CCccCHHHHHHHHhH-----cCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCC
Q 030467           57 RHLEELYNRYKD-PY-LDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (177)
Q Consensus        57 ~~l~~lF~~Y~d-~~-~d~I~~dG~~~~~ed-----Lgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~  124 (177)
                      ..|...|..|-+ .. ++.|+.+-+..++..     +|..++...+--+...+....-|.|+-++|+..|..+++
T Consensus         8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~   82 (94)
T cd05031           8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSI   82 (94)
T ss_pred             HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence            567788999965 32 469999999999876     677876666666666778888999999999999988754

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=94.08  E-value=0.19  Score=31.69  Aligned_cols=50  Identities=14%  Similarity=0.041  Sum_probs=45.8

Q ss_pred             CccCHHHHHHHHhHcCCC-CCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           72 DMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        72 d~I~~dG~~~~~edLgv~-~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      +.|+.+.+...+..+|+. +.+-.+=.|-..+-...-|.|+.+||+..|..
T Consensus         3 G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~   53 (54)
T PF13833_consen    3 GKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR   53 (54)
T ss_dssp             SEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred             CEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence            479999999999889999 88888999999999999999999999999875

...

>PTZ00184 calmodulin; Provisional

Probab=93.29  E-value=1.3  Score=32.62  Aligned_cols=67  Identities=10%  Similarity=0.108  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .+.+.+.|..+-......|+.+-+..++..+|.+|.+..+-.+.-.+....-|.++.++|+..|...
T Consensus        10 ~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~   76 (149)
T PTZ00184         10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARK   76 (149)
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHh
Confidence            3566777777632233589999999999888988877666667777777778889999999887753

>PTZ00183 centrin; Provisional

Probab=93.21  E-value=1.8  Score=32.32  Aligned_cols=83  Identities=8%  Similarity=0.141  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc--CCCcHHHHHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL--GIDSLDKFRER  133 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l--~~dsl~~lk~~  133 (177)
                      .+.+..+|..+-......|+.+-+..++..+|..+....+-.+--.+....-|.|+.++|+..+...  .....+.++..
T Consensus        16 ~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~   95 (158)
T PTZ00183         16 KKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKA   95 (158)
T ss_pred             HHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHH
Confidence            4667778877633233589999999999999987766555566666677788899999999887763  23344455554


Q ss_pred             HHHHH
Q 030467          134 ISFMR  138 (177)
Q Consensus       134 l~~l~  138 (177)
                      ...+.
T Consensus        96 F~~~D  100 (158)
T PTZ00183         96 FRLFD  100 (158)
T ss_pred             HHHhC
Confidence            44443

>PTZ00183 centrin; Provisional

Probab=93.19  E-value=0.62  Score=34.90  Aligned_cols=66  Identities=12%  Similarity=0.123  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...+..+|..|-....+.|+.+.+..+|..+|+.+.+-.+-.+...+....-|.|+.++|+..+..
T Consensus        89 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  154 (158)
T PTZ00183         89 REEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKK  154 (158)
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            456777787773333357888888888888876666555555556666566678888888777654

>KOG2086 consensus Protein tyrosine phosphatase SHP1/Cofactor for p97 ATPase-mediated vesicle membrane fusion [Nuclear structure]

Probab=93.14  E-value=0.024  Score=50.77  Aligned_cols=41  Identities=29%  Similarity=0.314  Sum_probs=37.7

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      ..+.+++|+.+||.++..|+.||...+|+++.|...++...
T Consensus         4 p~~~ls~f~~~t~~se~~~~~~l~s~~~d~~~a~~~~~~~~   44 (380)
T KOG2086|consen    4 PLDSLSEFRAVTGPSESRARFYLESIYWDREAAHRSELEAF   44 (380)
T ss_pred             chhHHHHHhccCCCCccccccccccCCCchhhhhhhhcccc
Confidence            35789999999999999999999999999999999999753

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=93.08  E-value=0.39  Score=30.95  Aligned_cols=61  Identities=8%  Similarity=0.059  Sum_probs=45.2

Q ss_pred             HHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        60 ~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .++|..+-......|+.+.+.+++..+|++.+.+.-  +...+....-|.|+.++|+..|..+
T Consensus         2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~--i~~~~d~~~~g~i~~~ef~~~~~~~   62 (67)
T cd00052           2 DQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQ--IWDLADTDKDGKLDKEEFAIAMHLI   62 (67)
T ss_pred             hHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHH--HHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            357888733233689999999999999985444333  3345677778999999999998765

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=92.40  E-value=0.84  Score=32.46  Aligned_cols=67  Identities=15%  Similarity=0.159  Sum_probs=52.8

Q ss_pred             HHHHHHHHHhcCC-C-CCccCHHHHHHHHhH---cCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           57 RHLEELYNRYKDP-Y-LDMILVDGITLLCND---LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        57 ~~l~~lF~~Y~d~-~-~d~I~~dG~~~~~ed---Lgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ..|.++|.+|... . .+.|+.+.+.+++..   +|..+.+-.+--+-..+....-|.|+-++|+.-|..+-
T Consensus        10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~   81 (88)
T cd05029          10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALA   81 (88)
T ss_pred             HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence            4678899999863 3 359999999999974   78777655566666677888889999999998877753

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>smart00027 EH Eps15 homology domain

Probab=92.33  E-value=0.54  Score=33.43  Aligned_cols=66  Identities=9%  Similarity=0.053  Sum_probs=50.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....+.+.|..+-....+.|+.+-+.+.+..+|++.+.+.-+.  -.+....-|.|+.++|+..|..+
T Consensus         8 ~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~--~~~d~~~~g~I~~~eF~~~~~~~   73 (96)
T smart00027        8 DKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIW--NLADIDNDGELDKDEFALAMHLI   73 (96)
T ss_pred             HHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHH--HHhcCCCCCCcCHHHHHHHHHHH
Confidence            3467888888884434469999999999999998766555433  34566778999999999988775

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=92.19  E-value=0.8  Score=29.76  Aligned_cols=62  Identities=15%  Similarity=0.129  Sum_probs=44.4

Q ss_pred             HHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCC--HH--HHHHHHhhCccccccccHHHHHhhh
Q 030467           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD--IV--MLVVSWHMKAATMCEFSKQEFIGGL  119 (177)
Q Consensus        58 ~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed--~~--~L~la~~l~a~~~g~~tr~eF~~g~  119 (177)
                      +|.++|+.|=....+.|+.+-+.+++..++....+  +.  +-.+-..+-...-|.|+.+||++.|
T Consensus         1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            47789999854445699999999999999986522  21  2222345566778999999998754

...

>PTZ00184 calmodulin; Provisional

Probab=91.38  E-value=1.1  Score=32.88  Aligned_cols=18  Identities=22%  Similarity=0.117  Sum_probs=8.7

Q ss_pred             ccccccHHHHHhhhhhcC
Q 030467          106 TMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus       106 ~~g~~tr~eF~~g~~~l~  123 (177)
                      .-|.+++++|..+++.+|
T Consensus        97 ~~g~i~~~e~~~~l~~~~  114 (149)
T PTZ00184         97 GNGFISAAELRHVMTNLG  114 (149)
T ss_pred             CCCeEeHHHHHHHHHHHC
Confidence            344555555555554444

>TIGR00264 alpha-NAC-related protein

Probab=90.97  E-value=0.28  Score=37.21  Aligned_cols=34  Identities=21%  Similarity=0.222  Sum_probs=29.9

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCCCCccccch
Q 030467            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFD   42 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~   42 (177)
                      .+.|+-.++-||+|+..|+..|+++|||+-.|+-
T Consensus        79 ~eDI~lV~eq~gvs~e~A~~AL~~~~gDl~~AI~  112 (116)
T TIGR00264        79 EDDIELVMKQCNVSKEEARRALEECGGDLAEAIM  112 (116)
T ss_pred             HHHHHHHHHHhCcCHHHHHHHHHHcCCCHHHHHH
Confidence            3557888899999999999999999999988874

This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator.

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=90.92  E-value=0.57  Score=33.12  Aligned_cols=67  Identities=12%  Similarity=0.140  Sum_probs=49.0

Q ss_pred             HHHHHHHHHhcCCC--CCccCHHHHHHHHh-HcCCCCC----CHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           57 RHLEELYNRYKDPY--LDMILVDGITLLCN-DLQVDPQ----DIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~--~d~I~~dG~~~~~e-dLgv~~e----d~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ..|..+|.+|...+  .+.|+.+-+..++. .+|-.+.    +-.+=-+-..+....-|.|+-++|+..+..+.
T Consensus         8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~   81 (88)
T cd05030           8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVG   81 (88)
T ss_pred             HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence            45778999999764  36999999999997 4543232    33344444556777889999999999988763

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed

Probab=90.68  E-value=0.31  Score=36.97  Aligned_cols=34  Identities=26%  Similarity=0.323  Sum_probs=30.6

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCCCCccccch
Q 030467            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFD   42 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~   42 (177)
                      .+.|+-.++-||+|+..|+..|+.++||+-.||-
T Consensus        77 ~edI~lv~~q~gvs~~~A~~AL~~~~gDl~~AI~  110 (115)
T PRK06369         77 EEDIELVAEQTGVSEEEARKALEEANGDLAEAIL  110 (115)
T ss_pred             HHHHHHHHHHHCcCHHHHHHHHHHcCCcHHHHHH
Confidence            4568889999999999999999999999988875

>KOG4351 consensus Uncharacterized conserved protein [Function unknown]

Probab=90.63  E-value=0.089  Score=44.34  Aligned_cols=45  Identities=20%  Similarity=0.407  Sum_probs=39.2

Q ss_pred             CccHHHHHHHHHHhhCCC--H-HHHHHHHHhCCCCccccchhhccccC
Q 030467            5 SRSNRDKLQQFVSITGAS--E-KAALQALKASDWHLEGAFDVFYSQPQ   49 (177)
Q Consensus         5 ~~~q~~~i~~F~~~T~~s--~-~~A~~~L~~~~w~le~A~~~ff~~~~   49 (177)
                      +.++..+|.+|..+++..  + ..|++||+..||||..|+..||+..+
T Consensus        20 t~dr~~Li~qf~~lm~~qm~P~~~aaF~Ld~knW~lqna~sv~~d~~t   67 (244)
T KOG4351|consen   20 TTDRPELIHQFQRLMNTQMNPMLSAAFVLDMKNWNLQNAGSVYWDQDT   67 (244)
T ss_pred             CCCcHHHHHHHHHHhhhccCcccccceeeeccceeccccccEEEcCCC
Confidence            456788999999999874  5 77999999999999999999998753

>TIGR01446 DnaD_dom DnaD and phage-associated domain

Probab=89.49  E-value=0.79  Score=30.93  Aligned_cols=56  Identities=7%  Similarity=0.211  Sum_probs=39.7

Q ss_pred             ccCHHHHHHHHhHcCCCCCCHHHHHHHHhh--CccccccccHHHHHhhhhhcCCCcHHHHH
Q 030467           73 MILVDGITLLCNDLQVDPQDIVMLVVSWHM--KAATMCEFSKQEFIGGLQSLGIDSLDKFR  131 (177)
Q Consensus        73 ~I~~dG~~~~~edLgv~~ed~~~L~la~~l--~a~~~g~~tr~eF~~g~~~l~~dsl~~lk  131 (177)
                      ....+-+..++++.|.+|+ ++..++-+-+  +.++++++.  .-+..|++-|+.|+++.+
T Consensus        15 ~~e~~~i~~~~~~~~~~~e-vI~~ai~~a~~~~~~~~~Yi~--~Il~~W~~~gi~T~e~~~   72 (73)
T TIGR01446        15 PFEMEDLKYWLDEFGNSPE-LIKEALKEAVSNNKANYKYID--AILNNWKNNGIKTVEDVE   72 (73)
T ss_pred             HHHHHHHHHHHHHhCCCHH-HHHHHHHHHHHcCCCCHHHHH--HHHHHHHHcCCCCHHHHh
Confidence            4567888899999998754 6666665544  344554443  566679999999999865

This model represents the conserved domain of DnaD, part of Bacillus subtilis replication restart primosome, and of a number of phage-associated proteins. Members, both chromosomal or phage-associated, are found in the Bacillus/Clostridium group of Gram-positive bacteria.

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=89.13  E-value=2  Score=29.69  Aligned_cols=67  Identities=12%  Similarity=0.096  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHhcC--CCCCccCHHHHHHHHhH-cCCCC----CCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKD--PYLDMILVDGITLLCND-LQVDP----QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d--~~~d~I~~dG~~~~~ed-Lgv~~----ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .+.+.++|..|-.  ...+.|+.+.+.+++.. +|..+    ....+=-+--.+....-|.|+-++|+..|..+
T Consensus         7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~   80 (88)
T cd00213           7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL   80 (88)
T ss_pred             HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence            3557778999955  34469999999999976 56433    23334444456677888999999999988865

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=88.66  E-value=3  Score=29.70  Aligned_cols=67  Identities=13%  Similarity=0.153  Sum_probs=49.5

Q ss_pred             HHHHHHHHHhcCCCCC--ccCHHHHHHHHhH-c----CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           57 RHLEELYNRYKDPYLD--MILVDGITLLCND-L----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d--~I~~dG~~~~~ed-L----gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ..+.++|.+|.+.+.|  .|+.+-+.+++.. +    +-.+.+-.+=-+...+....=|.|+-+||+.-+..+-
T Consensus        10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~   83 (93)
T cd05026          10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT   83 (93)
T ss_pred             HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence            4455669999976554  5999999999976 3    3333334455566677788889999999999888764

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=86.67  E-value=5.4  Score=30.48  Aligned_cols=85  Identities=14%  Similarity=0.211  Sum_probs=67.0

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCCC------cHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID------SLDK  129 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~d------sl~~  129 (177)
                      ...+.+.|..+-......|..+=+...+..||.+|....+-.+-..+....-|.|..++|+.-+......      +.+.
T Consensus         7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~e   86 (151)
T KOG0027|consen    7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEE   86 (151)
T ss_pred             HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHH
Confidence            4678888888854444699999999999999999999999999999999999999999999988876542      2335


Q ss_pred             HHHHHHHHHHH
Q 030467          130 FRERISFMRAE  140 (177)
Q Consensus       130 lk~~l~~l~~~  140 (177)
                      +|....-+...
T Consensus        87 l~eaF~~fD~d   97 (151)
T KOG0027|consen   87 LKEAFRVFDKD   97 (151)
T ss_pred             HHHHHHHHccC
Confidence            55555544443

>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C

Probab=86.20  E-value=2.1  Score=29.43  Aligned_cols=64  Identities=13%  Similarity=0.214  Sum_probs=43.8

Q ss_pred             HHHHHHHHhcCCCCCccCHHHHHHHHhHcC----CCCCCHHHHHHHHhh--CccccccccHHHHHhhhhhc
Q 030467           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQ----VDPQDIVMLVVSWHM--KAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        58 ~l~~lF~~Y~d~~~d~I~~dG~~~~~edLg----v~~ed~~~L~la~~l--~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .|..+|.+|.+ +...|+++.+.+|+.+-.    ++++.+.-++--+.-  .....+.+|.++|..=+..-
T Consensus         1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~   70 (83)
T PF09279_consen    1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSD   70 (83)
T ss_dssp             HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHST
T ss_pred             CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCC
Confidence            47899999987 567999999999996433    334444444333311  12356899999999877553

It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....

>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms]

Probab=85.94  E-value=0.45  Score=41.50  Aligned_cols=40  Identities=23%  Similarity=0.434  Sum_probs=36.7

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      ++++.+|-.+|.++++.|+.+|..+.|.++.|++.||...
T Consensus        26 ~~ll~efa~~~s~dea~aq~~l~~~dw~~~ral~~~~~se   65 (349)
T KOG2756|consen   26 RLLCVEFASVASCDAAVAQCFLAENDWEMERALNSYFEPE   65 (349)
T ss_pred             HHHHHHHHHhhhhHHHhHHHHhhcchhHHHHHHHhhcCce
Confidence            4678899999999999999999999999999999999753

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=85.89  E-value=4.3  Score=37.22  Aligned_cols=83  Identities=16%  Similarity=0.069  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCCCcHHHHHHHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERIS  135 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~dsl~~lk~~l~  135 (177)
                      ..+|-.+|.+-.-..+..|++..|.++|.|+||+.+|-..--+-..+--..-+.|+-+||.+=+.-.-   .+.+..-+.
T Consensus        81 E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p---~s~i~di~~  157 (463)
T KOG0036|consen   81 ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLYP---ESDLEDIYD  157 (463)
T ss_pred             HHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcCC---hhHHHHHHH
Confidence            45566666665433345999999999999999999998888877777777788999999998776654   455555555


Q ss_pred             HHHHHc
Q 030467          136 FMRAEL  141 (177)
Q Consensus       136 ~l~~~l  141 (177)
                      .|+..+
T Consensus       158 ~W~h~~  163 (463)
T KOG0036|consen  158 FWRHVL  163 (463)
T ss_pred             hhhhhe
Confidence            565554

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=85.31  E-value=5.9  Score=28.15  Aligned_cols=68  Identities=13%  Similarity=0.116  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHhcCCCCC--ccCHHHHHHHHhHc-----CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           56 TRHLEELYNRYKDPYLD--MILVDGITLLCNDL-----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d--~I~~dG~~~~~edL-----gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      -..|..+|.+|.+.+.+  .|+.+.+..+++.-     +-..++..+--+-..+....=|.|+-+||+.-+..+.
T Consensus         8 i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~   82 (89)
T cd05023           8 IESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA   82 (89)
T ss_pred             HHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence            35688899999876543  79999999999765     2222223344445566777889999999998777663

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=83.68  E-value=5.7  Score=31.70  Aligned_cols=68  Identities=12%  Similarity=0.081  Sum_probs=56.8

Q ss_pred             CCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ....+|...|.-|=......|+..=+...+..||-+..+-.+=-|-..+..-.-|.|+.++|+++|..
T Consensus        89 ~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~  156 (160)
T COG5126          89 DKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD  156 (160)
T ss_pred             CcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence            34788999999996655569999999999999999988777766666777778999999999998875

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=83.31  E-value=15  Score=29.73  Aligned_cols=104  Identities=11%  Similarity=0.196  Sum_probs=75.1

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc-C-CCcHHHHHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL-G-IDSLDKFRER  133 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l-~-~dsl~~lk~~  133 (177)
                      ...+...|+-+--...+.|+.+++--=.-.||.+|..-.++-|.--......|.|+=++|+..|... + -||.+.++..
T Consensus        32 ~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~a  111 (172)
T KOG0028|consen   32 KQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKA  111 (172)
T ss_pred             HhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHH
Confidence            3556666666532234799999996666789999999999988888888889999999999997763 2 4699988888


Q ss_pred             HHHHHHHccChhHHHHHHHHHhhhhh
Q 030467          134 ISFMRAELKDEQKFREIYNFAFAWAK  159 (177)
Q Consensus       134 l~~l~~~l~~~~~Fk~iY~ftF~f~~  159 (177)
                      +......=...-.++.+-+-++.++-
T Consensus       112 frl~D~D~~Gkis~~~lkrvakeLge  137 (172)
T KOG0028|consen  112 FRLFDDDKTGKISQRNLKRVAKELGE  137 (172)
T ss_pred             HHcccccCCCCcCHHHHHHHHHHhCc
Confidence            86544333332336666666666554

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=83.13  E-value=8.5  Score=27.45  Aligned_cols=66  Identities=12%  Similarity=0.015  Sum_probs=50.3

Q ss_pred             HHHHHHHHHhcC-CCCCccCHHHHHHHHhH-cCCCCCC-HHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKD-PYLDMILVDGITLLCND-LQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d-~~~d~I~~dG~~~~~ed-Lgv~~ed-~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..|.+.|..|.. ...+.|+.+.+..++.. ||--.++ -.+=-+-..+....=|.|+-+||+.-+..+
T Consensus         8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l   76 (89)
T cd05022           8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL   76 (89)
T ss_pred             HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            467889999966 45579999999999988 9844444 334444456777888999999999887776

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=82.37  E-value=10  Score=26.51  Aligned_cols=67  Identities=12%  Similarity=0.032  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHhcCCC-CC-ccCHHHHHHHHhH-cCC----CCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPY-LD-MILVDGITLLCND-LQV----DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~-~d-~I~~dG~~~~~ed-Lgv----~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...|.+.|..|-|.+ .. .|+.+-+.+++.. +|.    .|....+=-+-..+....-|.|+-++|+.-+..+
T Consensus         8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~   81 (92)
T cd05025           8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (92)
T ss_pred             HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            356888999996333 34 5999999999975 553    4554445555566788889999999999877765

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>KOG4199 consensus Uncharacterized conserved protein [Function unknown]

Probab=80.31  E-value=7  Score=35.41  Aligned_cols=152  Identities=20%  Similarity=0.294  Sum_probs=95.6

Q ss_pred             HHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccccCCCCcCCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHc--C
Q 030467           10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDL--Q   87 (177)
Q Consensus        10 ~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~~~~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL--g   87 (177)
                      +.+.+|+.  .+....|.++|+.-+..+..-+...--..++..++-.+.|+.| ++.-+..||..+.+|+.-...-|  .
T Consensus        81 ~ll~~l~d--~ck~~~A~r~la~~~ga~~~~it~~~la~~~~~~~l~ksL~al-~~lt~~qpdl~da~g~~vvv~lL~~~  157 (461)
T KOG4199|consen   81 ELLEQLAD--ECKKSLAHRVLAGKNGAHDALITLLELAESPNESVLKKSLEAI-NSLTHKQPDLFDAEAMAVVLKLLALK  157 (461)
T ss_pred             HHHHHHHH--HHhhhHHHHHHhccCCCcchhhhHHHHhhCCchhHHHHHHHHH-HHhhcCCcchhccccHHHHHHHHhcc
Confidence            45567763  5556678888888887776666555422222223334455444 33345567888888888777644  5


Q ss_pred             CCCCCHHHHHHHHhhCccccccccHHHHHhh-----hh-hcCCCcH-HHHHHHHHHHHHHccChh---HHHHHHHHHhhh
Q 030467           88 VDPQDIVMLVVSWHMKAATMCEFSKQEFIGG-----LQ-SLGIDSL-DKFRERISFMRAELKDEQ---KFREIYNFAFAW  157 (177)
Q Consensus        88 v~~ed~~~L~la~~l~a~~~g~~tr~eF~~g-----~~-~l~~dsl-~~lk~~l~~l~~~l~~~~---~Fk~iY~ftF~f  157 (177)
                      ++-+|+..+-+.|.-+|-.|-+..|..|++-     +. .+.-.+- .-.|..-..++.-+.|+.   .|-..|.|+=.+
T Consensus       158 ~~~~dlt~~~~~~v~~Ac~~hE~nrQ~~m~~~il~Li~~~l~~~gk~~~VRel~~a~r~l~~dDDiRV~fg~ah~hAr~i  237 (461)
T KOG4199|consen  158 VESEEVTLLTLQWLQKACIMHEVNRQLFMELKILELILQVLNREGKTRTVRELYDAIRALLTDDDIRVVFGQAHGHARTI  237 (461)
T ss_pred             cchHHHHHHHHHHHHHHHHHhHHHHHHHHHhhHHHHHHHHHcccCccHHHHHHHHHHHHhcCCCceeeecchhhHHHHHH
Confidence            5668899999999999999999999999874     11 1211111 234444455555554432   177777777777


Q ss_pred             hhccCCc
Q 030467          158 AKEKVIV  164 (177)
Q Consensus       158 ~~~~gqk  164 (177)
                      +++.+-+
T Consensus       238 a~e~~l~  244 (461)
T KOG4199|consen  238 AKEGILT  244 (461)
T ss_pred             HHhhhHH
Confidence            7765433

>smart00546 CUE Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs)

Probab=80.11  E-value=1.5  Score=26.82  Aligned_cols=36  Identities=14%  Similarity=0.264  Sum_probs=28.3

Q ss_pred             HHHHHHHh-hCCCHHHHHHHHHhCCCCccccchhhcc
Q 030467           11 KLQQFVSI-TGASEKAALQALKASDWHLEGAFDVFYS   46 (177)
Q Consensus        11 ~i~~F~~~-T~~s~~~A~~~L~~~~w~le~A~~~ff~   46 (177)
                      .+.+..++ =+.++...+..|+++++|++.|++...+
T Consensus         5 ~v~~L~~mFP~l~~~~I~~~L~~~~g~ve~~i~~LL~   41 (43)
T smart00546        5 ALHDLKDMFPNLDEEVIKAVLEANNGNVEATINNLLE   41 (43)
T ss_pred             HHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHc
Confidence            44555444 4567899999999999999999998764

CUE domains also occur in two protein of the IL-1 signal transduction pathway, tollip and TAB2. Ponting (Biochem. J.) "Proteins of the Endoplasmic reticulum" (in press)

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	177
3tdu_A	200	N-Terminal Acetylation Acts As An Avidity Enhancer		1e-24
4gao_A	200	Dcnl Complex With N-terminally Acetylated Nedd8 E2		3e-23
3kev_A	199	X-Ray Crystal Structure Of A Dcun1 Domain-Containin		2e-22
4gba_A	221	Dcnl Complex With N-terminally Acetylated Nedd8 E2		6e-20

>pdb|3TDU|A Chain A, N-Terminal Acetylation Acts As An Avidity Enhancer Within An Interconnected Multiprotein Complex: Structure Of A Human Cul1whb- Dcn1p-Acetylated Ubc12n Complex Length = 200

Iteration: 1
 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
Query: 57  RHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEF 115
           + LE+LYNRYKDP   + I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF
Sbjct: 4   KKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEF 63
Query: 116 IGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
           + G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK
Sbjct: 64  MDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAK 107

>pdb|4GAO|A Chain A, Dcnl Complex With N-terminally Acetylated Nedd8 E2 Peptide Length = 200

Iteration: 1
 Score =  104 bits (259), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/104 (47%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Query: 57  RHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEF 115
           + LE LY RYKDP   + I VDGI   C+DL +DP  I +LV++W  +AAT CEFS++EF
Sbjct: 4   KKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRKEF 63
Query: 116 IGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
           + G+  LG DS++K +  +  +  ELKD  KF++ Y F F +AK
Sbjct: 64  LDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFTFTFAK 107

>pdb|3KEV|A Chain A, X-Ray Crystal Structure Of A Dcun1 Domain-Containing Protein From Galdieria Sulfuraria Length = 199

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 73/107 (68%)
Query: 54  TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
            D + + EL+  YK+P  + I  +G+  L  D+QVDP D+V LV++W +KA++  EFS++
Sbjct: 4   ADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTXEFSEK 63
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKE 160
           EF+ GL +L +DSL+K + ++S +R E++D  KFR  Y F F ++KE
Sbjct: 64  EFVEGLANLQVDSLEKLKRKLSSLRKEIEDPSKFRAFYQFVFQYSKE 110

>pdb|4GBA|A Chain A, Dcnl Complex With N-terminally Acetylated Nedd8 E2 Peptide Length = 221

Iteration: 1
 Score = 93.6 bits (231), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 64/99 (64%)
Query: 57  RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
           + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF 
Sbjct: 6   QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 65
Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAF 155
            G +++  DS+D    R   +  E K E KF+++Y F F
Sbjct: 66  DGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTF 104

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	177
3bq3_A	270	Defective in cullin neddylation protein 1; ubiquit	2e-42
3kev_A	199	Galieria sulfuraria DCUN1 domain-containing prote;	4e-37
3tdu_A	200	DCN1-like protein 1; E2:E3, ligase-protein binding	9e-35
1v92_A	46	NSFL1 cofactor P47; 3-helix bundle, recombination;	2e-06
2dzl_A	66	Protein FAM100B; UBA-like domain, structural genom	2e-04
2dal_A	62	Protein KIAA0794; FAS associted factor 1, UBA-like	5e-04

>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria} Length = 199

 Score =  125 bits (316), Expect = 4e-37
 Identities = 46/108 (42%), Positives = 74/108 (68%)

Query: 54  TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
            D + + EL+  YK+P  + I  +G+  L  D+QVDP D+V LV++W +KA++ CEFS++
Sbjct: 4   ADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEK 63

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEK 161
           EF+ GL +L +DSL+K + ++S +R E++D  KFR  Y F F ++KE 
Sbjct: 64  EFVEGLANLQVDSLEKLKRKLSSLRKEIEDPSKFRAFYQFVFQYSKEP 111

>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A Length = 200

 Score =  120 bits (301), Expect = 9e-35
 Identities = 50/106 (47%), Positives = 72/106 (67%), Gaps = 1/106 (0%)

Query: 57  RHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEF 115
           + LE+LYNRYKDP   + I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF
Sbjct: 4   KKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEF 63

Query: 116 IGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEK 161
           + G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK  
Sbjct: 64  MDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNP 109

>1v92_A NSFL1 cofactor P47; 3-helix bundle, recombination; NMR {Rattus norvegicus} SCOP: a.5.2.3 Length = 46

 Score = 42.1 bits (99), Expect = 2e-06
 Identities = 15/44 (34%), Positives = 26/44 (59%)

Query: 4  LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47
          ++   +D L++FV++TGA E  A   L+++ W L+ A   FY  
Sbjct: 1  MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYED 44

>2dzl_A Protein FAM100B; UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 66

 Score = 37.1 bits (85), Expect = 2e-04
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 12 LQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47
          + QFV   G +   A Q L+A+ W  E A   F+ +
Sbjct: 21 INQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQE 56

>2dal_A Protein KIAA0794; FAS associted factor 1, UBA-like domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 62

 Score = 36.0 bits (82), Expect = 5e-04
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 9  RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45
          +  +QQF +ITGASE      L+A + +LE A  +F 
Sbjct: 16 KGLIQQFTTITGASESVGKHMLEACNNNLEMAVTMFL 52

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	177
3bq3_A	270	Defective in cullin neddylation protein 1; ubiquit	100.0
3kev_A	199	Galieria sulfuraria DCUN1 domain-containing prote;	100.0
3tdu_A	200	DCN1-like protein 1; E2:E3, ligase-protein binding	100.0
4gba_A	221	DCN1-like protein 3; E3 ligase, ligase-peptide com	100.0
2dam_A	67	ETEA protein; KIAA0887, UBA-like domain, structura	99.48
2dal_A	62	Protein KIAA0794; FAS associted factor 1, UBA-like	99.43
1v92_A	46	NSFL1 cofactor P47; 3-helix bundle, recombination;	99.39
3e21_A	45	HFAF1, FAS-associated factor 1; UBA, alternative s	99.3
2dzl_A	66	Protein FAM100B; UBA-like domain, structural genom	99.24
2jp7_A	57	MRNA export factor MEX67; solution MEX67, UBA, tra	98.25
1oai_A	59	Nuclear RNA export factor; nuclear transport, nucl	98.18
4gew_A	362	5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy	97.99
1z96_A	40	DNA-damage, UBA-domain protein MUD1; ubiquitin, th	97.71
1wj7_A	104	Hypothetical protein (RSGI RUH-015); UBA domain, u	97.42
2l2d_A	73	OTU domain-containing protein 7A; UBA fold, struct	97.01
1jkg_B	250	TAP; NTF2-like domain, transport protein; 1.90A {H	96.9
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	96.82
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	96.6
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	96.47
3fwb_A	161	Cell division control protein 31; gene gating, com	96.42
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	96.42
1ify_A	49	HHR23A, UV excision repair protein RAD23 homolog A	96.35
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	96.32
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	96.32
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	96.3
1dv0_A	47	DNA repair protein HHR23A; helical bundle, DNA bin	96.18
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	96.18
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	96.18
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	96.15
2g3q_A	43	Protein YBL047C; endocytosis, solution structure,	96.15
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	96.13
1vg5_A	73	RSGI RUH-014, rhomboid family protein; UBA domain,	96.04
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	95.99
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	95.92
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	95.86
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	95.83
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	95.83
2jy5_A	52	Ubiquilin-1; UBA, alternative splicing, cytoplasm,	95.82
1veg_A	83	NEDD8 ultimate buster-1; ubiquitin associated doma	95.79
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	95.63
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	95.61
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	95.6
2jnf_A	158	Troponin C; stretch activated muscle contraction,	95.59
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	95.57
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	95.48
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	95.36
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	95.35
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	95.3
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	95.3
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	95.28
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	95.28
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	95.27
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	95.21
3li6_A	66	Calcium-binding protein; calcium signaling protein	95.2
3fwb_A	161	Cell division control protein 31; gene gating, com	95.18
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	95.17
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	95.12
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	95.12
2dkl_A	85	Trinucleotide repeat containing 6C protein; TNRC6C	95.12
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	95.08
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	95.06
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	95.05
2dak_A	63	Ubiquitin carboxyl-terminal hydrolase 5; isopeptid	95.04
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	95.04
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	95.03
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	95.02
2jnf_A	158	Troponin C; stretch activated muscle contraction,	94.99
1wji_A	63	Tudor domain containing protein 3; UBA domain, str	94.97
1y1x_A	191	Leishmania major homolog of programmed cell death	94.96
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	94.94
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	94.94
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	94.89
1wiv_A	73	UBP14, ubiquitin-specific protease 14; ubiquitin a	94.89
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	94.88
2dah_A	54	Ubiquilin-3; UBA domain, structural genomics, NPPS	94.88
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	94.84
1y1x_A	191	Leishmania major homolog of programmed cell death	94.83
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	94.83
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	94.82
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	94.8
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	94.77
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	94.76
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	94.72
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	94.64
2knz_A	53	Ubiquilin-4; cytoplasm, endoplasmic reticulum, nuc	94.62
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	94.58
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	94.57
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	94.56
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	94.54
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	94.53
1wgn_A	63	UBAP1, ubiquitin associated protein; ubiquitin ass	94.51
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	94.48
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	94.48
2cp9_A	64	EF-TS, EF-TSMT, elongation factor TS, mitochondria	94.47
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	94.41
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	94.25
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	94.22
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	94.19
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	94.08
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	94.04
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	94.02
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	93.94
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	93.9
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	93.89
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	93.87
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	93.86
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	93.79
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	93.79
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	93.74
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	93.74
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	93.74
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	93.73
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	93.71
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	93.69
1wr1_B	58	Ubiquitin-like protein DSK2; UBA domain, UBA-ubiqu	93.67
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	93.49
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	93.44
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	93.42
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	93.4
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	93.37
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	93.34
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	93.33
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	93.31
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	93.27
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	93.26
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	93.26
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	93.22
2bwb_A	46	Ubiquitin-like protein DSK2; UBA, signaling protei	93.21
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	93.2
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	93.18
2ekk_A	47	UBA domain from E3 ubiquitin-protein ligase HUWE1;	93.15
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	93.14
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	93.13
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	93.1
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	93.09
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	93.07
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	93.05
2dai_A	83	Ubadc1, ubiquitin associated domain containing 1;	93.05
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	93.01
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	92.97
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	92.92
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	92.89
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	92.81
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	92.8
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	92.8
1vej_A	74	Riken cDNA 4931431F19; UBA domain, three helix bun	92.76
1c07_A	95	Protein (epidermal growth factor receptor pathway	92.7
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	92.69
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	92.68
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	92.6
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	92.58
2cpw_A	64	CBL-interacting protein STS-1 variant; ubiquitin a	92.57
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	92.55
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	92.54
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	92.54
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	92.53
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	92.53
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	92.52
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	92.52
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	92.49
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	92.47
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	92.45
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	92.44
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	92.43
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	92.36
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	92.3
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	92.04
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	92.04
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	92.02
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	92.01
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	92.0
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	91.98
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	91.94
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	91.92
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	91.86
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	91.73
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	91.7
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	91.64
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	91.61
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	91.58
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	91.49
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	91.39
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	91.35
2cwb_A	108	Chimera of immunoglobulin G binding protein G and	91.27
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	91.18
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	91.04
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	90.98
1whc_A	64	RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain	90.93
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	90.9
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	90.73
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	90.72
2dag_A	74	Ubiquitin carboxyl-terminal hydrolase 5; isopeptid	90.67
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	90.66
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	90.54
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	90.48
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	90.43
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	90.43
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	90.39
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	90.27
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	90.22
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	90.19
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	89.94
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	89.85
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	89.85
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	89.79
1vek_A	84	UBP14, ubiquitin-specific protease 14, putative; U	89.67
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	89.47
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	89.45
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	89.41
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	89.39
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	89.39
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	89.22
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	89.18
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	89.15
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	89.13
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	89.04
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	88.99
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	88.9
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	88.77
1tr8_A	102	Conserved protein (MTH177); chaperones, nascent po	88.7
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	88.63
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	88.58
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	88.53
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	88.46
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	88.12
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	88.12
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	88.06
2d9s_A	53	CBL E3 ubiquitin protein ligase; UBA domain, dimer	88.04
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	88.02
2ooa_A	52	E3 ubiquitin-protein ligase CBL-B; alpha-helical d	87.97
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	87.64
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	87.49
2jq6_A	139	EH domain-containing protein 1; metal binding prot	87.49
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	87.44
2cp8_A	54	NEXT to BRCA1 gene 1 protein; UBA domain, structur	86.69
4ae4_A	118	Ubiquitin-associated protein 1; protein transport,	86.42
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	86.41
2lbc_A	126	Ubiquitin carboxyl-terminal hydrolase 13; tandem U	86.41
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	86.35
1otr_A	49	Protein CUE2; protein-protein complex, cell cycle;	86.1
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	85.89
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	85.83
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	84.96
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	84.74
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	84.11
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	84.1
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	84.07
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	84.03
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	83.91
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	83.48
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	83.44
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	83.24
2dna_A	67	Unnamed protein product; ubiquitin associated doma	83.04
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	82.73
1vdl_A	80	Ubiquitin carboxyl-terminal hydrolase 25; UBA doma	82.57
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	82.35
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	82.28
2hps_A	186	Coelenterazine-binding protein with bound coelent;	81.78
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	81.76
1aip_C	196	EF-TS, elongation factor TS; nucleotide exchange,	81.56
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	81.56
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	81.39
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	81.33
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	81.13
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	80.65
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	80.34
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	80.14
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	80.07

>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}

Probab=100.00  E-value=1e-47  Score=312.84  Aligned_cols=124  Identities=38%  Similarity=0.715  Sum_probs=120.3

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCCCcHHHHHH
Q 030467           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRE  132 (177)
Q Consensus        53 ~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~dsl~~lk~  132 (177)
                      +.++++|++||++|+||+++.||+||+++||+||||+|+|+++|||||+|+|++||+|||+||++||+++||||+++||+
T Consensus         3 ~~~~~~l~~lF~~Y~d~~~~~I~~dG~~~~~~DLgv~ped~~~LvLaw~l~a~~~g~ftr~ef~~G~~~l~~dsi~~lk~   82 (199)
T 3kev_A            3 RADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEKEFVEGLANLQVDSLEKLKR   82 (199)
T ss_dssp             -CCHHHHHHHHHHHCCTTSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHTTCCSHHHHHH
T ss_pred             ccCHHHHHHHHHHhcCCCcCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCcccHHHHHHHHHHhCCCCHHHHHH
Confidence            56889999999999999767999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHccChhHHHHHHHHHhhhhhccCCcccChHhHHhhhh
Q 030467          133 RISFMRAELKDEQKFREIYNFAFAWAKEKVIVFLFLRISTCKLS  176 (177)
Q Consensus       133 ~l~~l~~~l~~~~~Fk~iY~ftF~f~~~~gqk~L~le~A~~~~~  176 (177)
                      +|+.|+++|+++..||+||+|||+|+|++|||+|++|||++||.
T Consensus        83 ~l~~l~~~l~d~~~Fk~~Y~ftF~~~re~gqk~L~~e~Ai~~W~  126 (199)
T 3kev_A           83 KLSSLRKEIEDPSKFRAFYQFVFQYSKEPSQRSLPAETAMALWD  126 (199)
T ss_dssp             HHHHHHHHTTSHHHHHHHHHHHHHHHSCTTCSSBCHHHHHHHHH
T ss_pred             HHHHHHHHccCHHHHHHHHHHHHHHHcCcCcCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999985

>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*

Probab=100.00  E-value=3.1e-47  Score=310.15  Aligned_cols=122  Identities=43%  Similarity=0.800  Sum_probs=118.7

Q ss_pred             CHHHHHHHHHHhcCCC-CCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCCCcHHHHHHH
Q 030467           55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRER  133 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~-~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~dsl~~lk~~  133 (177)
                      +.++|++||++|+||+ +|.||+||+++||+||||+|+|+++|||||+|+|++||+|||+||++||+++||||+++||++
T Consensus         2 ~~~~l~~lF~~Y~d~~~~d~I~~dG~~~~~~DLgv~ped~~~Lvlaw~l~a~~~g~ftr~ef~~G~~~l~~dsi~~lk~~   81 (200)
T 3tdu_A            2 SRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQ   81 (200)
T ss_dssp             CHHHHHHHHHHHEETTEEEEECHHHHHHHHHHHTCCTTSHHHHHHHHHTTCSSTTCEEHHHHHHHHHHHTCSSHHHHHHT
T ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCccCHHHHHHHHHHHccccHHHHHHH
Confidence            5789999999999986 589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHccChhHHHHHHHHHhhhhhccCCcccChHhHHhhhh
Q 030467          134 ISFMRAELKDEQKFREIYNFAFAWAKEKVIVFLFLRISTCKLS  176 (177)
Q Consensus       134 l~~l~~~l~~~~~Fk~iY~ftF~f~~~~gqk~L~le~A~~~~~  176 (177)
                      |+.|+++|+++..||+||+|||+|+|++|||+|++|||+++|.
T Consensus        82 l~~l~~~l~d~~~Fk~~Y~ftF~~~r~~gqk~L~~e~Ai~~W~  124 (200)
T 3tdu_A           82 IPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWN  124 (200)
T ss_dssp             HHHHHHHTTSHHHHHHHHHHHHHHHSCTTCSSEEHHHHHHHHH
T ss_pred             HHHHHHHccCHHHHHHHHHHHHHHHcCcCcCcCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999985

>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}

Probab=100.00  E-value=7.7e-47  Score=311.66  Aligned_cols=124  Identities=35%  Similarity=0.680  Sum_probs=118.0

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCCCcHHHHHH
Q 030467           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRE  132 (177)
Q Consensus        53 ~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~dsl~~lk~  132 (177)
                      +++.++|++||++|+|+++|.||+||+++||+||||+|+|+++|||||+|+|++||+|||+||++||+++||||+++||+
T Consensus         2 ~~~~~~l~~lF~~Y~d~~~d~I~~eGi~~l~~DLgv~ped~~~LvLAw~l~A~~mg~ftr~eF~~G~~~l~~dsi~~lk~   81 (221)
T 4gba_A            2 SSSLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICA   81 (221)
T ss_dssp             ----CHHHHHHHTTSCSSSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHTCSSHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHhCCCccCcCcHHHHHHHHHHhCcCCHHHHHH
Confidence            45778999999999999889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHccChhHHHHHHHHHhhhhhc--cCCcccChHhHHhhhh
Q 030467          133 RISFMRAELKDEQKFREIYNFAFAWAKE--KVIVFLFLRISTCKLS  176 (177)
Q Consensus       133 ~l~~l~~~l~~~~~Fk~iY~ftF~f~~~--~gqk~L~le~A~~~~~  176 (177)
                      +|+.|+++|+++..||+||+|||+|+|+  +|||+|++|||++||.
T Consensus        82 ~l~~L~~~l~d~~~Fk~~Y~ftF~~~~~~e~gqk~L~le~Ai~~W~  127 (221)
T 4gba_A           82 RFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWK  127 (221)
T ss_dssp             HHHHHHHHTTSHHHHHHHHHHHHHHHSCTTTTCSSEEHHHHHHHHH
T ss_pred             HHHHHHHHccCHHHHHHHHHHHHHHHhcCCccccCCCHHHHHHHHH
Confidence            9999999999999999999999999999  9999999999999985

>2dam_A ETEA protein; KIAA0887, UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=2e-14  Score=97.94  Aligned_cols=52  Identities=23%  Similarity=0.436  Sum_probs=47.7

Q ss_pred             CCCCCccHHHHHHHHHHhhC-CCHHHHHHHHHhCCCCccccchhhccccCCCC
Q 030467            1 MHKLSRSNRDKLQQFVSITG-ASEKAALQALKASDWHLEGAFDVFYSQPQSKS   52 (177)
Q Consensus         1 m~~l~~~q~~~i~~F~~~T~-~s~~~A~~~L~~~~w~le~A~~~ff~~~~~~~   52 (177)
                      |++|+++|+++|.+|++||| +++.+|++||+.++|||+.||+.||+.....+
T Consensus        11 ~~~Ls~~~~e~i~qF~~ITg~~d~~~A~~~Le~~~WnLe~Av~~ff~~~~~~p   63 (67)
T 2dam_A           11 ERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEGSG   63 (67)
T ss_dssp             CCCCCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHTSCHHHHHHHHHHSSCSSC
T ss_pred             hhhcChhHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCHHHHHHHHHhCCCCCC
Confidence            56899999999999999999 89999999999999999999999998865433

>2dal_A Protein KIAA0794; FAS associted factor 1, UBA-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.43  E-value=9.3e-14  Score=93.20  Aligned_cols=48  Identities=35%  Similarity=0.405  Sum_probs=45.4

Q ss_pred             CCCccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccccCC
Q 030467            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS   50 (177)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~~   50 (177)
                      .|++.|+++|.+|+++||+++.+|++||+.++|||+.||+.||+.+..
T Consensus        10 ~~s~~~~e~i~qF~~iTg~~~~~A~~~Le~~~WnLe~Av~~ff~~~~~   57 (62)
T 2dal_A           10 AASSALKGLIQQFTTITGASESVGKHMLEACNNNLEMAVTMFLDGGGS   57 (62)
T ss_dssp             SSCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTSCHHHHHHHHHHSCCC
T ss_pred             hcCccHHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHcCCCC
Confidence            578899999999999999999999999999999999999999998754

>1v92_A NSFL1 cofactor P47; 3-helix bundle, recombination; NMR {Rattus norvegicus} SCOP: a.5.2.3

Probab=99.39  E-value=1.8e-13  Score=86.00  Aligned_cols=43  Identities=35%  Similarity=0.618  Sum_probs=40.4

Q ss_pred             ccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         6 ~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      ++++++|.+|+++||+++.+|++||+.++|||+.||+.||++|
T Consensus         3 ~~~~~~i~~F~~iTg~~~~~A~~~L~~~~wdle~Ai~~ff~~~   45 (46)
T 1v92_A            3 EERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDG   45 (46)
T ss_dssp             THHHHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred             ccHHHHHHHHHHHhCcCHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence            3578899999999999999999999999999999999999875

>3e21_A HFAF1, FAS-associated factor 1; UBA, alternative splicing, apoptosis, nucleus, phosphoprotein; 1.73A {Homo sapiens}

Probab=99.30  E-value=1e-12  Score=82.92  Aligned_cols=42  Identities=24%  Similarity=0.383  Sum_probs=37.0

Q ss_pred             CccHHHHHHHHHHhhCCCH-HHHHHHHHhCCCCccccchhhcc
Q 030467            5 SRSNRDKLQQFVSITGASE-KAALQALKASDWHLEGAFDVFYS   46 (177)
Q Consensus         5 ~~~q~~~i~~F~~~T~~s~-~~A~~~L~~~~w~le~A~~~ff~   46 (177)
                      +.++.++|.+|+++||+++ ..|++||++|||||+.|++.||.
T Consensus         2 ~~d~de~ia~F~~iTG~~d~~~A~~~Lea~nWDLe~Av~~f~~   44 (45)
T 3e21_A            2 SMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIP   44 (45)
T ss_dssp             -CCHHHHHHHHHHHHCCCCHHHHHHHHHHTTTCHHHHHTTC--
T ss_pred             cccHHHHHHHHHHHHCCCCHHHHHHHHHHcCCcHHHHHHHHcC
Confidence            3468899999999999995 99999999999999999999985

>2dzl_A Protein FAM100B; UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=5.1e-12  Score=85.77  Aligned_cols=41  Identities=29%  Similarity=0.549  Sum_probs=38.9

Q ss_pred             HHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccccCC
Q 030467           10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS   50 (177)
Q Consensus        10 ~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~~   50 (177)
                      ++|.+|+++||+++.+|++||+.++|||+.|++.||+++..
T Consensus        19 ~~i~qF~~iTg~~~~~A~~~Le~~~WdLe~Al~~ff~~~~~   59 (66)
T 2dzl_A           19 VMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQETNI   59 (66)
T ss_dssp             HHHHHHHHHHCCCHHHHHHHHHTTTTCHHHHHHHHHTCSCC
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHcCCCC
Confidence            78999999999999999999999999999999999998753

>2jp7_A MRNA export factor MEX67; solution MEX67, UBA, translation; NMR {Saccharomyces cerevisiae} PDB: 2khh_A

Probab=98.25  E-value=9.6e-07  Score=58.01  Aligned_cols=45  Identities=20%  Similarity=0.260  Sum_probs=42.4

Q ss_pred             CCCccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccc
Q 030467            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (177)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~   47 (177)
                      +|++.|.++|.+|+..||.+..-+..+|+.++||++.|+..|-..
T Consensus         1 ~l~~~q~~mv~~~s~~T~Mn~e~S~~cL~~n~Wd~~~A~~~F~~~   45 (57)
T 2jp7_A            1 RLNPVQLELLNKLHLETKLNAEYTFMLAEQSNWNYEVAIKGFQSS   45 (57)
T ss_dssp             CCCHHHHHHHHHHHHHHCSCHHHHHHHHHHTTTCSHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999653

>1oai_A Nuclear RNA export factor; nuclear transport, nuclear transport factor; 1.0A {Homo sapiens} SCOP: a.5.2.3

Probab=98.18  E-value=1.3e-06  Score=57.74  Aligned_cols=44  Identities=20%  Similarity=0.397  Sum_probs=41.7

Q ss_pred             CCCccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcc
Q 030467            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS   46 (177)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~   46 (177)
                      -||+.|.++|.+|...||.+..-+..+|+.++||++.|+..|-+
T Consensus         2 ~ls~~q~~mv~~~s~~Tgmn~~~s~~cL~~~~Wd~~~A~~~F~~   45 (59)
T 1oai_A            2 TLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTH   45 (59)
T ss_dssp             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999965

>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A

Probab=97.99  E-value=1.9e-06  Score=74.28  Aligned_cols=40  Identities=40%  Similarity=0.697  Sum_probs=37.5

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccc
Q 030467            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~   47 (177)
                      ..+++++|.++||++++.|+.||+.++|+|+.|++.||+.
T Consensus        45 ~~~~~~~f~~~~~~~~~~~~~~l~~~~w~~~~~~~~~~~~   84 (362)
T 4gew_A           45 DEQKLHEFAIITATDEAFAQSILQDVDWDLKKALDVFYGS   84 (362)
T ss_dssp             HHHHHHHHHHHHTCCHHHHHHHTTSSSSCHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHhCCcHHHHHHHHhhcCchHHHHHHHHcCC
Confidence            4578999999999999999999999999999999999954

>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1

Probab=97.71  E-value=3.1e-05  Score=46.33  Aligned_cols=39  Identities=31%  Similarity=0.319  Sum_probs=34.5

Q ss_pred             ccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhc
Q 030467            6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (177)
Q Consensus         6 ~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff   45 (177)
                      ++..+.|++++++ |.++..|++.|+.++||++.|++-.|
T Consensus         2 ~~~~~~i~~L~~m-Gf~~~~a~~AL~~~~~n~e~A~~~L~   40 (40)
T 1z96_A            2 PGLNSKIAQLVSM-GFDPLEAAQALDAANGDLDVAASFLL   40 (40)
T ss_dssp             -CHHHHHHHHHHT-TCCHHHHHHHHHHTTTCHHHHHHHHC
T ss_pred             chHHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHC
Confidence            4567789999998 99999999999999999999998654

>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1

Probab=97.42  E-value=9.1e-05  Score=54.04  Aligned_cols=43  Identities=21%  Similarity=0.368  Sum_probs=39.4

Q ss_pred             ccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         6 ~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      ++-.+.|+..+++||+++..|+..|..++||++.||+..++..
T Consensus        37 ~d~eekVk~L~EmtG~seeeAr~AL~~~ngDl~~AI~~Lleg~   79 (104)
T 1wj7_A           37 ADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGN   79 (104)
T ss_dssp             HHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred             ccHHHHHHHHHHhhCCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            3446789999999999999999999999999999999999775

>2l2d_A OTU domain-containing protein 7A; UBA fold, structural genomics, PSI-biology, protein structur initiative, northeast structural genomics consortium; NMR {Homo sapiens}

Probab=97.01  E-value=0.00071  Score=45.23  Aligned_cols=42  Identities=26%  Similarity=0.412  Sum_probs=38.3

Q ss_pred             CCccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhc
Q 030467            4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (177)
Q Consensus         4 l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff   45 (177)
                      ++-+.+..+.+|+.-||+.+-.|+.+|+--||++.+|++.|=
T Consensus        13 mt~dmdavls~fvrstgaepgLaRDlleGKnWDl~AAL~D~e   54 (73)
T 2l2d_A           13 MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAALSDYE   54 (73)
T ss_dssp             SSCCHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHhcCCCcchhHHhhccCCccHhHHhhhHH
Confidence            455677889999999999999999999999999999999984

>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A

Probab=96.90  E-value=0.00015  Score=60.13  Aligned_cols=46  Identities=20%  Similarity=0.364  Sum_probs=0.0

Q ss_pred             CCCccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      .+++.|+++|.+|...||.+.+-+..+|+.++||++.|+..|-+-.
T Consensus       193 ~~~~~q~~~v~~~~~~T~mn~~~s~~cL~~~~Wd~~~A~~~F~~l~  238 (250)
T 1jkg_B          193 TLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLK  238 (250)
T ss_dssp             ----------------------------------------------
T ss_pred             CCCHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            3567788999999999999999999999999999999999995543

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=96.82  E-value=0.013  Score=41.65  Aligned_cols=81  Identities=12%  Similarity=0.184  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhh---CccccccccHHHHHhhhhhcC----CCcHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHM---KAATMCEFSKQEFIGGLQSLG----IDSLD  128 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l---~a~~~g~~tr~eF~~g~~~l~----~dsl~  128 (177)
                      ...+.++|..|-......|+.+-+..++..+|+.|....+-.+...+   .... |.|+.+||+..|....    -++..
T Consensus         7 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~   85 (149)
T 2mys_C            7 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFE   85 (149)
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHH
Confidence            46788899988544446999999999999999999877777777777   7777 9999999999998851    23345


Q ss_pred             HHHHHHHHH
Q 030467          129 KFRERISFM  137 (177)
Q Consensus       129 ~lk~~l~~l  137 (177)
                      .++.....+
T Consensus        86 ~~~~~F~~~   94 (149)
T 2mys_C           86 DFVEGLRVF   94 (149)
T ss_pred             HHHHHHHHh
Confidence            555554444

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=96.60  E-value=0.0044  Score=39.24  Aligned_cols=67  Identities=12%  Similarity=0.046  Sum_probs=55.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ....+.++|..|-......|+.+-+..++..+|..+.+-.+-.+...+....-|.|+.+||+..|..
T Consensus         4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   70 (71)
T 2b1u_A            4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ   70 (71)
T ss_dssp             THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred             cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence            4678999999984333469999999999999999887776666777777788899999999988764

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=96.47  E-value=0.0097  Score=37.03  Aligned_cols=64  Identities=6%  Similarity=0.078  Sum_probs=52.9

Q ss_pred             HHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        58 ~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      .+.++|..|-....+.|+.+-+.+.+..+|..+.+-.+-.+-..+....-|.|+.+||+..|..
T Consensus         2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            4678899984434469999999999999999887776666777778888899999999998865

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=96.42  E-value=0.038  Score=39.72  Aligned_cols=97  Identities=8%  Similarity=0.106  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc--CCCcHHHHHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL--GIDSLDKFRER  133 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l--~~dsl~~lk~~  133 (177)
                      ...+.++|..|-....+.|+.+-+..++..+|+.+....+-.+...+....-|.|+.+||+..+...  .......++..
T Consensus        22 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~  101 (161)
T 3fwb_A           22 KQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRA  101 (161)
T ss_dssp             HHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHH
Confidence            5778888888844344699999999999999999988888888888888889999999999999763  33455666666


Q ss_pred             HHHHHHHcc---ChhHHHHHHH
Q 030467          134 ISFMRAELK---DEQKFREIYN  152 (177)
Q Consensus       134 l~~l~~~l~---~~~~Fk~iY~  152 (177)
                      ...+...=.   +..+|+.+.+
T Consensus       102 F~~~D~d~~G~i~~~el~~~l~  123 (161)
T 3fwb_A          102 FQLFDDDHTGKISIKNLRRVAK  123 (161)
T ss_dssp             HHHHCTTCSSEECHHHHHHHHH
T ss_pred             HHHHcCCCCCeEeHHHHHHHHH
Confidence            555543321   3344555544

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=96.42  E-value=0.034  Score=37.05  Aligned_cols=70  Identities=10%  Similarity=0.059  Sum_probs=57.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCC
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~  124 (177)
                      ....|.++|..|-......|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.+||+..|.....
T Consensus         7 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~   76 (92)
T 2kn2_A            7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRG   76 (92)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccC
Confidence            3577899999994333469999999999999999887766667777778888899999999999987643

>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=96.35  E-value=0.0035  Score=39.37  Aligned_cols=41  Identities=20%  Similarity=0.246  Sum_probs=35.8

Q ss_pred             ccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccc
Q 030467            6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (177)
Q Consensus         6 ~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~   47 (177)
                      +...+.|++.+++ |-++..|+..|++++||++.|++--|+.
T Consensus         6 ~~~~~~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~e~L~~g   46 (49)
T 1ify_A            6 SEYETMLTEIMSM-GYERERVVAALRASYNNPHRAVEYLLTG   46 (49)
T ss_dssp             HHHHHHHHHHHHT-TCCHHHHHHHHHTTTSCSHHHHHHHHHC
T ss_pred             ccCHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence            3446789999987 8999999999999999999999887764

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=96.32  E-value=0.021  Score=38.12  Aligned_cols=66  Identities=8%  Similarity=0.046  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...+.++|..|-....+.|+.+-+..++..+|+.+.+-.+-.+...+....-|.|+.+||+..|..
T Consensus        19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~   84 (90)
T 1avs_A           19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   84 (90)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            467888999994333469999999999999999987776667777778888899999999998875

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=96.32  E-value=0.023  Score=40.21  Aligned_cols=68  Identities=9%  Similarity=0.145  Sum_probs=57.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....+.++|..|-....+.|+.+-+.+++..+|+.+....+-.+...+....-|.|+.+||+..+...
T Consensus         9 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~   76 (147)
T 4ds7_A            9 QIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQ   76 (147)
T ss_dssp             HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHh
Confidence            35678889999854444699999999999999999988888788888888889999999999998764

>1dv0_A DNA repair protein HHR23A; helical bundle, DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 1f4i_A

Probab=96.18  E-value=0.001  Score=41.58  Aligned_cols=43  Identities=19%  Similarity=0.261  Sum_probs=37.6

Q ss_pred             CccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            5 SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         5 ~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      +++.+++|.+.+++ |.++..|++.|.+++||.+.|++-.|+++
T Consensus         1 ~~~e~eaI~rL~~m-GF~~~~a~~Al~a~~~n~e~A~~~Lf~~~   43 (47)
T 1dv0_A            1 GSQEKEAIERLKAL-GFPESLVIQAYFACEKNENLAANFLLSQN   43 (47)
T ss_dssp             --CCHHHHTTTTTT-TCCHHHHHHHHTTTTSCHHHHHHHTTSCC
T ss_pred             CcchHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCc
Confidence            45667889999987 99999999999999999999999998765

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=96.18  E-value=0.068  Score=37.81  Aligned_cols=98  Identities=9%  Similarity=0.135  Sum_probs=68.5

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCCC------cHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID------SLDK  129 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~d------sl~~  129 (177)
                      ...+.++|..+-....+.|+.+-+.+++..+|+.+....+-.+...+....-|.|+.+||+..+......      +...
T Consensus        10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~   89 (153)
T 3ox6_A           10 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKE   89 (153)
T ss_dssp             HHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHH
Confidence            4678888888843334699999999999999999988887777778888888999999999998764322      1344


Q ss_pred             HHHHHHHHHHHc---cChhHHHHHHHH
Q 030467          130 FRERISFMRAEL---KDEQKFREIYNF  153 (177)
Q Consensus       130 lk~~l~~l~~~l---~~~~~Fk~iY~f  153 (177)
                      ++.....+...=   -+..+|+.+.+-
T Consensus        90 ~~~~F~~~D~d~~G~i~~~el~~~l~~  116 (153)
T 3ox6_A           90 LRDAFREFDTNGDGEISTSELREAMRA  116 (153)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            444444443221   133446655543

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=96.18  E-value=0.014  Score=37.23  Aligned_cols=68  Identities=10%  Similarity=0.075  Sum_probs=53.0

Q ss_pred             CHHHHHHHHHHhcCC-CC-CccCHHHHHHHHhHcCCCC--CCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDP-YL-DMILVDGITLLCNDLQVDP--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~-~~-d~I~~dG~~~~~edLgv~~--ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....+..+|..|.|. .. ..|+.+-+...+..+|..+  .+-.+-.+...+....-|.|+.+||+.-|..+
T Consensus         3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~   74 (76)
T 1qx2_A            3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            356899999999433 34 6899999999999999776  55445555566677778999999999988764

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=96.15  E-value=0.045  Score=39.47  Aligned_cols=83  Identities=7%  Similarity=0.009  Sum_probs=63.2

Q ss_pred             CHHHHHHHHHHhcCCC-CCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC-----CCcHH
Q 030467           55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG-----IDSLD  128 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~-~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~-----~dsl~  128 (177)
                      ....+.++|..|-... ...|+.+-+..++..+|+.+....+-.+...+....-|.|+.+||+..+....     -.+..
T Consensus        16 ~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~   95 (161)
T 1dtl_A           16 QKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEE   95 (161)
T ss_dssp             HHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHH
T ss_pred             HHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHH
Confidence            3567888999885444 46899999999999999999877777777788888899999999999988753     23344


Q ss_pred             HHHHHHHHH
Q 030467          129 KFRERISFM  137 (177)
Q Consensus       129 ~lk~~l~~l  137 (177)
                      .++.....+
T Consensus        96 ~~~~~F~~~  104 (161)
T 1dtl_A           96 ELSDLFRMF  104 (161)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            454444443

>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1

Probab=96.15  E-value=0.0034  Score=38.05  Aligned_cols=39  Identities=23%  Similarity=0.467  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccc
Q 030467            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~   47 (177)
                      ..+.|++.+++ |-++..|++.|+.++||++.|++--|++
T Consensus         4 ~e~~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~L~~~   42 (43)
T 2g3q_A            4 KSLAVEELSGM-GFTEEEAHNALEKCNWDLEAATNFLLDS   42 (43)
T ss_dssp             HHHHHHHHHTT-TSCHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCcCHHHHHHHHHcC
Confidence            35789999995 9999999999999999999999876643

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=96.13  E-value=0.018  Score=36.89  Aligned_cols=66  Identities=9%  Similarity=0.112  Sum_probs=54.6

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...+.++|..|-....+.|+.+-+.+.+..+|+.+..-.+-.+...+....-|.|+.+||+..|..
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   71 (77)
T 2joj_A            6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE   71 (77)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred             HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            467888999994333469999999999999999987766666777778888899999999988765

>1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1

Probab=96.04  E-value=0.0041  Score=42.49  Aligned_cols=44  Identities=25%  Similarity=0.343  Sum_probs=38.4

Q ss_pred             CCccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         4 l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      .++...+.|++.+++ |-++..|+..|+.++||++.|++-.|.+.
T Consensus        25 ~~~~~ee~I~~L~eM-GF~r~~a~~AL~~~~~nve~Ave~Ll~~~   68 (73)
T 1vg5_A           25 RVAASEEQIQKLVAM-GFDRTQVEVALAAADDDLTVAVEILMSQS   68 (73)
T ss_dssp             CSCCCHHHHHHHHTT-TCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred             CCcccHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            345557889999996 89999999999999999999999988764

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=95.99  E-value=0.063  Score=35.17  Aligned_cols=66  Identities=11%  Similarity=-0.031  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+..+|..|-....+.|+.+-+...+..+| .+.+-.+-.+-..+....-|.|+.+||+..+...
T Consensus        10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   75 (86)
T 2opo_A           10 IADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   75 (86)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence            57789999999443446999999999999999 7776666677777788888999999999999875

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=95.92  E-value=0.052  Score=37.00  Aligned_cols=67  Identities=9%  Similarity=0.035  Sum_probs=55.2

Q ss_pred             CCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      .....+.++|..|-....+.|+.+-+.+.+..+|..+.+-.+-.+...+....-|.|+.+||+..|.
T Consensus        26 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~   92 (94)
T 2kz2_A           26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT   92 (94)
T ss_dssp             SCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            3568899999999433346999999999999999988776666666777778889999999998775

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=95.86  E-value=0.064  Score=40.80  Aligned_cols=96  Identities=8%  Similarity=0.001  Sum_probs=70.0

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCCCcHHHHHHHH
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERI  134 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~dsl~~lk~~l  134 (177)
                      ....+.++|..|-....+.|+.+-+...+..+|+.+. ..+-.+...+....-|.|+.+||+..+......+.+.++...
T Consensus        50 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~l~~~F  128 (191)
T 3k21_A           50 DVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCAF  128 (191)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGGCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhhccHHHHHHHH
Confidence            4578999999994434469999999999999999887 555556667778888999999999998665545566666666


Q ss_pred             HHHHHHcc---ChhHHHHHH
Q 030467          135 SFMRAELK---DEQKFREIY  151 (177)
Q Consensus       135 ~~l~~~l~---~~~~Fk~iY  151 (177)
                      ..+...=.   +..+|+.+.
T Consensus       129 ~~~D~d~~G~Is~~El~~~l  148 (191)
T 3k21_A          129 RVFDVDNDGEITTAELAHIL  148 (191)
T ss_dssp             HHHSTTCSSCBCHHHHHHHH
T ss_pred             HHhCCCCCCcCCHHHHHHHH
Confidence            55543322   334465555

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=95.83  E-value=0.072  Score=37.57  Aligned_cols=82  Identities=12%  Similarity=0.152  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc--CCCcHHHHHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL--GIDSLDKFRER  133 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l--~~dsl~~lk~~  133 (177)
                      ...+.++|..|-......|+.+-+..++..+|+.+....+-.+...+....-|.|+.+||+..+...  .-.....++..
T Consensus         5 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~   84 (142)
T 2bl0_C            5 VSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQA   84 (142)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHH
Confidence            4678899999944344699999999999999999987777777778888888999999999998862  23445555555


Q ss_pred             HHHH
Q 030467          134 ISFM  137 (177)
Q Consensus       134 l~~l  137 (177)
                      ...+
T Consensus        85 F~~~   88 (142)
T 2bl0_C           85 FRTF   88 (142)
T ss_dssp             HHHT
T ss_pred             HHHH
Confidence            4443

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=95.83  E-value=0.023  Score=36.97  Aligned_cols=69  Identities=9%  Similarity=0.028  Sum_probs=55.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcC-CCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCC
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLg-v~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~  124 (177)
                      ....+. +|..|-....+.|+.+-+...+..+| ..+.+-.+-.+...+....-|.|+.+||+..|....+
T Consensus         7 ~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~   76 (81)
T 1c7v_A            7 EEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSKN   76 (81)
T ss_dssp             CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC--
T ss_pred             HHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhh
Confidence            467889 99999433346999999999999999 8887766666777788888999999999999887543

>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B

Probab=95.82  E-value=0.0066  Score=38.54  Aligned_cols=39  Identities=26%  Similarity=0.416  Sum_probs=34.2

Q ss_pred             HHHHHHHHHhhCC-CHHHHHHHHHhCCCCccccchhhcccc
Q 030467            9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         9 ~~~i~~F~~~T~~-s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      .+.|++.+++ |- ++..|++.|+.++||++.|++--|.+|
T Consensus        13 ~~~l~~L~~M-GF~~~~~~~~AL~~t~gn~e~A~e~L~~~~   52 (52)
T 2jy5_A           13 QQQLEQLSAM-GFLNREANLQALIATGGDINAAIERLLGSS   52 (52)
T ss_dssp             HHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHTTCC
T ss_pred             HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHhCc
Confidence            4678999987 77 899999999999999999999887654

>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1

Probab=95.79  E-value=0.0072  Score=42.26  Aligned_cols=40  Identities=18%  Similarity=0.193  Sum_probs=36.4

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      ..+.|++.+++ |-++..|++.|+.++||++.|++-.|.++
T Consensus        29 ~ee~I~~Lv~M-GF~~~~A~~AL~~t~gdve~A~e~L~sh~   68 (83)
T 1veg_A           29 SQESINQLVYM-GFDTVVAEAALRVFGGNVQLAAQTLAHHG   68 (83)
T ss_dssp             CHHHHHHHHHH-SCCHHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            35789999997 99999999999999999999999999864

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=95.63  E-value=0.057  Score=35.51  Aligned_cols=66  Identities=6%  Similarity=0.001  Sum_probs=53.3

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHH---HHHHHHhhCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIV---MLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~---~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ....+.++|..|-....+.|+.+-+...+..+|..+....   +-.+...+....-|.|+. ||+..+..
T Consensus        12 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~   80 (86)
T 1j7q_A           12 EKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK   80 (86)
T ss_dssp             HHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence            3577899999994433469999999999999999988766   656666666677889999 99998865

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=95.61  E-value=0.039  Score=35.93  Aligned_cols=67  Identities=10%  Similarity=0.030  Sum_probs=48.2

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcC--CCCCCHHHHH----HHHhhCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQ--VDPQDIVMLV----VSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLg--v~~ed~~~L~----la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ....+..+|..|-....+.|+.+-+..++..+|  ..+.+-.+-.    +-..+....-|.|+.+||+..+..
T Consensus         5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~   77 (83)
T 1yx7_A            5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAE   77 (83)
T ss_dssp             SCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHH
Confidence            346789999999443346999999999999999  5443333333    333455567889999999976654

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=95.60  E-value=0.06  Score=38.67  Aligned_cols=66  Identities=11%  Similarity=0.121  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...+.++|..|-......|+.+-+...+..+|..|....+-.+...+....-|.|+.+||+..|..
T Consensus         9 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~   74 (148)
T 1exr_A            9 IAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMAR   74 (148)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHh
Confidence            456888898884434469999999999999999998777777777778888899999999988865

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=95.59  E-value=0.053  Score=39.01  Aligned_cols=68  Identities=9%  Similarity=0.049  Sum_probs=57.6

Q ss_pred             CHHHHHHHHHHhc-CCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYK-DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~-d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....+.++|..|- ......|+.+-+.+++..+|+.|..-.+-.+...+....-|.|+.+||+..+...
T Consensus        11 ~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~   79 (158)
T 2jnf_A           11 QVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARF   79 (158)
T ss_dssp             HHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            3567888999986 4445699999999999999999987777777778888888999999999999765

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=95.57  E-value=0.057  Score=37.80  Aligned_cols=65  Identities=12%  Similarity=0.172  Sum_probs=54.3

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~  119 (177)
                      ....|.++|+.|=....+.|+.+-+.+.+..||+.+.+-.+-.+-..+....-|.|+-+||+.-|
T Consensus        34 ~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           34 ELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             GHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             HHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            35678899999943344699999999999999999977777777788888889999999999754

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=95.48  E-value=0.043  Score=35.31  Aligned_cols=65  Identities=12%  Similarity=0.054  Sum_probs=52.7

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..+..+|..|-....+.|+.+-+..++..+| .+.+-.+-.+...+....-|.|+.+||+..+...
T Consensus         3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~   67 (78)
T 1k9u_A            3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN   67 (78)
T ss_dssp             CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence            4688999999443446999999999999999 7666666666667777888999999999988774

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=95.35  E-value=0.082  Score=37.95  Aligned_cols=66  Identities=6%  Similarity=0.041  Sum_probs=40.1

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..+..+|..|-....+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+.-+..+
T Consensus        96 ~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  161 (162)
T 1top_A           96 EELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV  161 (162)
T ss_dssp             HHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence            445666666633233567777777777777765554444444455555566777777777666554

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=95.30  E-value=0.1  Score=39.55  Aligned_cols=100  Identities=10%  Similarity=0.114  Sum_probs=69.8

Q ss_pred             CHHHHHHHHHHhcCC-CCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCC-CcHHHHHH
Q 030467           55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI-DSLDKFRE  132 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~-~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~-dsl~~lk~  132 (177)
                      ....+.++|+.|-.. ....|+.+-+..++..+|..+....+-.+-..+....-|.|+.+||+..+..++. .+.+.++.
T Consensus        20 ~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~   99 (204)
T 1jba_A           20 DAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKW   99 (204)
T ss_dssp             HHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHH
T ss_pred             CHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHHH
Confidence            467889999998654 3468999999999999999666555555666777888899999999999988753 34455555


Q ss_pred             HHHHHHHHc---cChhHHHHHHHHH
Q 030467          133 RISFMRAEL---KDEQKFREIYNFA  154 (177)
Q Consensus       133 ~l~~l~~~l---~~~~~Fk~iY~ft  154 (177)
                      .+..+...=   -+..+|+.+..-.
T Consensus       100 ~F~~~D~d~~G~I~~~E~~~~l~~~  124 (204)
T 1jba_A          100 TFKIYDKDRNGCIDRQELLDIVESI  124 (204)
T ss_dssp             HHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            555443221   1334466555544

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=95.30  E-value=0.23  Score=33.80  Aligned_cols=68  Identities=9%  Similarity=0.058  Sum_probs=52.8

Q ss_pred             CCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHc---CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL---gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      .....+..+|..|-......|+.+-+.+.+..+   |..+.+-.+-.+-..+....-|.|+.+||+.-|++
T Consensus        38 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 5pal_A           38 KTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             CCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            356788999999843334689999999999988   88876666555566667778899999999987765

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=95.28  E-value=0.13  Score=35.04  Aligned_cols=66  Identities=9%  Similarity=0.034  Sum_probs=48.8

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHc---CCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL---gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ....+..+|..|-......|+.+-+.+++..+   |..+.+-.+-.+-..+....-|.|+.+||+..|+
T Consensus        39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 2pvb_A           39 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK  107 (108)
T ss_dssp             CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            46778888888843334588888888888888   7767665555555666677778899999987664

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=95.28  E-value=0.078  Score=38.56  Aligned_cols=68  Identities=9%  Similarity=0.144  Sum_probs=57.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....+.++|..|-....+.|+.+-+..++..+|+.+....+-.+-..+....-|.|+.+||+..+...
T Consensus        26 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~   93 (169)
T 3qrx_A           26 QKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAK   93 (169)
T ss_dssp             HHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            35778888999844344699999999999999999988888888888888889999999999998763

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=95.27  E-value=0.17  Score=36.65  Aligned_cols=96  Identities=11%  Similarity=0.176  Sum_probs=71.7

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC--CCcHHHHHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG--IDSLDKFRER  133 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~--~dsl~~lk~~  133 (177)
                      ...|.++|+.|=....+.|+.+=+..++..+|.+|.+-.+-.+...+....-|.++.++|+..+....  ..+-+.++..
T Consensus         9 i~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~a   88 (148)
T 2lmt_A            9 IAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREA   88 (148)
T ss_dssp             HHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHH
Confidence            36678889998433446999999999999999999888888888888888999999999999887643  4455667776


Q ss_pred             HHHHHHHcc---ChhHHHHHH
Q 030467          134 ISFMRAELK---DEQKFREIY  151 (177)
Q Consensus       134 l~~l~~~l~---~~~~Fk~iY  151 (177)
                      ...+...=.   +...|+.+.
T Consensus        89 F~~~D~d~~G~I~~~El~~~l  109 (148)
T 2lmt_A           89 FKIFDRDGDGFISPAELRFVM  109 (148)
T ss_dssp             HHHHHSSCSSEECHHHHHHHH
T ss_pred             HHHHCCCCcCcCcHHHHHHHH
Confidence            666544322   344455554

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=95.21  E-value=0.078  Score=36.16  Aligned_cols=71  Identities=10%  Similarity=0.097  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCCCc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDS  126 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~ds  126 (177)
                      ...|.++|..|-......|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.+||+..|......+
T Consensus        23 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~   93 (105)
T 1wlz_A           23 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSSETAAT   93 (105)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC------
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhccCCCC
Confidence            56788999999433346999999999999999988766665566666667789999999999988755443

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=95.20  E-value=0.0091  Score=37.24  Aligned_cols=64  Identities=11%  Similarity=0.106  Sum_probs=50.2

Q ss_pred             HHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        59 l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      |.++|..|-....+.|+.+-+..++..+|..+.+-.+-.+-..+....-|.|+.+||+..|..+
T Consensus         2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~   65 (66)
T 3li6_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI   65 (66)
T ss_dssp             CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTCC
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence            3467888844344699999999999999977765556666667778888999999999988764

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=95.18  E-value=0.095  Score=37.56  Aligned_cols=65  Identities=12%  Similarity=0.151  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ...+..+|..|-....+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+.-|.
T Consensus        95 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  159 (161)
T 3fwb_A           95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICT  159 (161)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            34566666666322234677777777777676666555555555555555666677777766554

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=95.17  E-value=0.2  Score=34.11  Aligned_cols=66  Identities=6%  Similarity=0.033  Sum_probs=46.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHc---CCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL---gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ....+..+|..|-......|+.+-+.+.+..+   |..+.+-.+-.+-..+....-|.|+.+||+.-|+
T Consensus        40 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           40 TPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK  108 (109)
T ss_dssp             CHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred             cHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            46778888888843334588888888888888   6666555555555556666778888888887664

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=95.12  E-value=0.1  Score=38.39  Aligned_cols=67  Identities=10%  Similarity=0.071  Sum_probs=41.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcC-CCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLg-v~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ..+.+.++|..+-......|+.+-+.+.+..+| ..+..-.+-.+...+....-|.|+.+||+..|..
T Consensus         5 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~   72 (172)
T 2znd_A            5 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY   72 (172)
T ss_dssp             -CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHH
T ss_pred             chhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            456777777777332335777777777777777 4444444444455556666677777777766553

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=95.12  E-value=0.23  Score=33.79  Aligned_cols=67  Identities=7%  Similarity=0.060  Sum_probs=48.9

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHc---CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL---gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ....+..+|..|-......|+.+-+.+++..+   |..+.+-.+-.+...+....-|.|+.+||+..|+.
T Consensus        40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  109 (110)
T 1pva_A           40 SANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE  109 (110)
T ss_dssp             CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             hHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence            46778888888843334588888888888888   66666555555556667777788888888877653

>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=95.12  E-value=0.019  Score=40.22  Aligned_cols=39  Identities=21%  Similarity=0.383  Sum_probs=35.3

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      .+.|++++++ |-++..|++.|..++||++.|++-.|+++
T Consensus        22 ~~~I~qL~~M-GF~~~~a~~AL~~~n~n~e~A~ewL~~h~   60 (85)
T 2dkl_A           22 SRLIKQLTDM-GFPREPAEEALKSNNMNLDQAMSALLEKK   60 (85)
T ss_dssp             HHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHTTS
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHHCc
Confidence            5679999995 99999999999999999999999888765

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=95.08  E-value=0.095  Score=37.95  Aligned_cols=67  Identities=13%  Similarity=0.135  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+.++|..|-......|+.+-+..++..+|..+....+-.+...+....-|.|+.+||+..+..+
T Consensus        26 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~   92 (166)
T 2aao_A           26 IAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHL   92 (166)
T ss_dssp             HHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence            4668888998854344689999999999999999887777777778888888999999999888654

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=95.06  E-value=0.12  Score=36.24  Aligned_cols=80  Identities=8%  Similarity=0.126  Sum_probs=56.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC---CCcHHHHH
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG---IDSLDKFR  131 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~---~dsl~~lk  131 (177)
                      ++..+.++|..|-......|+.+-+.+++..+|+.+....+-.+...   ..-|.|+.+||+..+....   -.....++
T Consensus         3 s~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~   79 (145)
T 2bl0_B            3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEML   79 (145)
T ss_dssp             CHHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHHH
T ss_pred             CHHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHHH
Confidence            34558999999943334689999999999999998876554444433   6678999999999887752   12344555


Q ss_pred             HHHHHH
Q 030467          132 ERISFM  137 (177)
Q Consensus       132 ~~l~~l  137 (177)
                      .....+
T Consensus        80 ~~F~~~   85 (145)
T 2bl0_B           80 DAFRAL   85 (145)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            544444

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=95.05  E-value=0.58  Score=33.03  Aligned_cols=62  Identities=18%  Similarity=0.232  Sum_probs=33.6

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..|.++|..+-......|+.+-+ +.+..+|.+|+   +-.+...+....-|.|+.+||+..+..+
T Consensus         6 ~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~~---~~~~~~~~D~~~~g~i~~~ef~~~~~~~   67 (155)
T 3ll8_B            6 KRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQF   67 (155)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCTT---HHHHHHHHCTTCSSSBCHHHHHHHHGGG
T ss_pred             HHHHHHHHHhCcCCCCeEcHHHH-HHhhccccchH---HHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            45556666663222346666666 45555665552   3333344455556666666666666554

>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.04  E-value=0.015  Score=38.12  Aligned_cols=40  Identities=38%  Similarity=0.475  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      ..+.|++++++ |-++..|++.|+.++||++.|++-.|+++
T Consensus         9 ~~~~v~~L~~M-GF~~~~a~~AL~~t~~nve~A~e~L~~~~   48 (63)
T 2dak_A            9 PEDCVTTIVSM-GFSRDQALKALRATNNSLERAVDWIFSHI   48 (63)
T ss_dssp             CHHHHHHHHHH-TCCHHHHHHHHHHTTSCSHHHHHHHHHHH
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            35779999995 99999999999999999999999888754

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=95.04  E-value=0.11  Score=38.16  Aligned_cols=68  Identities=10%  Similarity=0.115  Sum_probs=54.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....+.++|..|-......|+.+-+..++..+|+.|.+..+-.+...+....-|.|+.+||+..+...
T Consensus         9 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~   76 (179)
T 2f2o_A            9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK   76 (179)
T ss_dssp             HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHH
Confidence            35778889988844334689999999999999999887777777777888888899999998887653

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=95.03  E-value=0.1  Score=37.97  Aligned_cols=69  Identities=9%  Similarity=0.106  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHH----HHhHcCCCCCCHHHH-----------HHHHhhCccccccccHHHHHhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITL----LCNDLQVDPQDIVML-----------VVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~----~~edLgv~~ed~~~L-----------~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ...+.++|+.|-......|+.+-+..    ++..+|++|.+..+-           .+...+....-|.|+.+||+..+.
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~~   85 (176)
T 1nya_A            6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTE   85 (176)
T ss_dssp             HHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            56889999999433346999999998    789999999876654           455667777889999999999998


Q ss_pred             hcCC
Q 030467          121 SLGI  124 (177)
Q Consensus       121 ~l~~  124 (177)
                      ....
T Consensus        86 ~~~~   89 (176)
T 1nya_A           86 NLIF   89 (176)
T ss_dssp             HHHS
T ss_pred             HHhc
Confidence            8643

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=95.02  E-value=0.26  Score=36.61  Aligned_cols=68  Identities=10%  Similarity=0.054  Sum_probs=54.4

Q ss_pred             CHHHHHHHHHHhcCCC-CCccCHHHHHHHHhHc----CCCCCCHHHHHHH-----------HhhCccccccccHHHHHhh
Q 030467           55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDL----QVDPQDIVMLVVS-----------WHMKAATMCEFSKQEFIGG  118 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~-~d~I~~dG~~~~~edL----gv~~ed~~~L~la-----------~~l~a~~~g~~tr~eF~~g  118 (177)
                      ...++.++|+.|.|.+ ...|+.+-+...+..+    |..+.+..+-.+.           ..+....-|.|+.+||+..
T Consensus        10 ~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~   89 (191)
T 2ccm_A           10 QRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKM   89 (191)
T ss_dssp             HHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred             HHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHH
Confidence            3577899999994433 4699999999999988    9988776665555           6677778899999999999


Q ss_pred             hhhc
Q 030467          119 LQSL  122 (177)
Q Consensus       119 ~~~l  122 (177)
                      |..+
T Consensus        90 ~~~~   93 (191)
T 2ccm_A           90 WAEC   93 (191)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8775

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=94.99  E-value=0.63  Score=33.12  Aligned_cols=107  Identities=14%  Similarity=0.045  Sum_probs=59.7

Q ss_pred             CCCCccHHHHHHH-HHHhh-----C-CCHHHHHHHHHhCCCCccccchhhccccCCCCcCCHHHHHHHHHHhcCCCCCcc
Q 030467            2 HKLSRSNRDKLQQ-FVSIT-----G-ASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMI   74 (177)
Q Consensus         2 ~~l~~~q~~~i~~-F~~~T-----~-~s~~~A~~~L~~~~w~le~A~~~ff~~~~~~~~~~~~~l~~lF~~Y~d~~~d~I   74 (177)
                      ..|++.+...+++ |..+-     | .+...-..+|+..+.++                 ....+..+|..|-....+.|
T Consensus         5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~-----------------~~~~~~~l~~~~D~~~~g~i   67 (158)
T 2jnf_A            5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQ-----------------TKSTIRQLIDEFDPFGNGDI   67 (158)
T ss_dssp             TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSC-----------------SHHHHHHHHHHHCTTCCSEE
T ss_pred             hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCC-----------------CHHHHHHHHHHhCCCCCCcC
Confidence            4677777666654 44443     1 24566666676655432                 34567777777743333577


Q ss_pred             CHHHHHHHHhHcCCCC----CC-HHHHHHHHhhCccccccccHHHHHhhhhhcCCC
Q 030467           75 LVDGITLLCNDLQVDP----QD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID  125 (177)
Q Consensus        75 ~~dG~~~~~edLgv~~----ed-~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~d  125 (177)
                      +.+-...++....-..    .. -.+-.+-..+-...-|.|+++||...+..+|..
T Consensus        68 ~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~  123 (158)
T 2jnf_A           68 DFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDET  123 (158)
T ss_dssp             CHHHHHHHHHHHCCCCCCTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTT
T ss_pred             cHHHHHHHHHHHhccccchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCc
Confidence            7777777775543221    11 112222234455566777777777777777643

>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=94.97  E-value=0.019  Score=37.86  Aligned_cols=40  Identities=28%  Similarity=0.419  Sum_probs=35.5

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      ..+.|++.+++ |-++..|++.|+.++||++.|++--|++.
T Consensus         9 ~~~~I~~L~~M-GF~~~~a~~AL~~~~~nve~A~e~L~~~~   48 (63)
T 1wji_A            9 DEKALKHITEM-GFSKEASRQALMDNGNNLEAALNVLLTSN   48 (63)
T ss_dssp             CHHHHHHHHTT-TCCHHHHHHHHHHTTSCHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            35789999985 99999999999999999999999888664

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=94.96  E-value=0.16  Score=38.35  Aligned_cols=67  Identities=13%  Similarity=-0.006  Sum_probs=54.0

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...++.++|+.+-......|+.+-+...+..+|..+..-.+-.+...+....-|.|+.+||+..+..
T Consensus        25 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~   91 (191)
T 1y1x_A           25 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF   91 (191)
T ss_dssp             TTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            4678999999994334469999999999988888877666666677778888899999999988764

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=94.94  E-value=0.24  Score=33.65  Aligned_cols=67  Identities=7%  Similarity=0.018  Sum_probs=51.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHc---CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL---gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ....+.++|..|-......|+.+-+.+++..+   |..+.+-.+-.+...+....-|.|+.+||+..|..
T Consensus        39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 1rwy_A           39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             CHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence            46788899999843334689999999999998   77776665555666667777889999999987764

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=94.94  E-value=0.094  Score=36.17  Aligned_cols=68  Identities=12%  Similarity=0.083  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ...+.++|..|-....+.|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.+||+.-|....
T Consensus        31 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~~   98 (107)
T 2d58_A           31 LEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR   98 (107)
T ss_dssp             HHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSSS
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcc
Confidence            46788889888433346999999999999999998777777777777888889999999999887754

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=94.89  E-value=0.085  Score=37.89  Aligned_cols=79  Identities=11%  Similarity=0.178  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHhcC--CCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC---CCcHHHH
Q 030467           56 TRHLEELYNRYKD--PYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG---IDSLDKF  130 (177)
Q Consensus        56 ~~~l~~lF~~Y~d--~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~---~dsl~~l  130 (177)
                      ...|.++|..|-.  .....|+.+-+...+..+|+.|..-.+-.+ ..+....-|.|+.+||+..+....   -+....+
T Consensus         8 ~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l   86 (156)
T 1wdc_C            8 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADY   86 (156)
T ss_dssp             HHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHH
T ss_pred             HHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHH
Confidence            4567888888854  445689999999999999999877666666 666677788999999999888763   3344555


Q ss_pred             HHHHH
Q 030467          131 RERIS  135 (177)
Q Consensus       131 k~~l~  135 (177)
                      +....
T Consensus        87 ~~~F~   91 (156)
T 1wdc_C           87 MEAFK   91 (156)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            54443

>1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1

Probab=94.89  E-value=0.022  Score=38.67  Aligned_cols=41  Identities=29%  Similarity=0.406  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccccC
Q 030467            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~   49 (177)
                      ..+.|++.+++ |-++..|++.|+.++||++.|++-.|+++.
T Consensus        29 ~~~~v~~L~~M-GF~~~~a~~AL~~t~~nve~Ave~L~~~~~   69 (73)
T 1wiv_A           29 DQSSVDTLLSF-GFAEDVARKALKASGGDIEKATDWVFNNSG   69 (73)
T ss_dssp             CHHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHHSCC
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence            35678999986 999999999999999999999998887653

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=94.88  E-value=0.073  Score=37.55  Aligned_cols=65  Identities=12%  Similarity=0.112  Sum_probs=50.3

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ....+.++|..|-......|+.+-+...+..+|+.|....+-.+.   . ..-|.|+.+||+..+....
T Consensus         3 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~-~~~g~i~~~eF~~~~~~~~   67 (140)
T 1ggw_A            3 DDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIE---S-TLPAEVDMEQFLQVLNRPN   67 (140)
T ss_dssp             CCTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHH---T-TSCSSEEHHHHHHHHCTTS
T ss_pred             hHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHH---h-CCCCcCcHHHHHHHHHHHh
Confidence            345788999998543446999999999999999998765544433   2 6678999999999988764

>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=94.88  E-value=0.014  Score=37.36  Aligned_cols=41  Identities=27%  Similarity=0.322  Sum_probs=34.3

Q ss_pred             HHHHHHHHHhhCCC-HHHHHHHHHhCCCCccccchhhccccCC
Q 030467            9 RDKLQQFVSITGAS-EKAALQALKASDWHLEGAFDVFYSQPQS   50 (177)
Q Consensus         9 ~~~i~~F~~~T~~s-~~~A~~~L~~~~w~le~A~~~ff~~~~~   50 (177)
                      .+.|.+.+++ |-+ +..+++.|+.++||++.|++--|..+..
T Consensus        10 ~~~l~~L~~M-GF~d~~~n~~AL~~~~Gdv~~Ave~L~~~~~~   51 (54)
T 2dah_A           10 QVQLEQLRSM-GFLNREANLQALIATGGDVDAAVEKLRQSSGP   51 (54)
T ss_dssp             HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhCCCc
Confidence            5678899887 885 4557999999999999999999987643

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=94.84  E-value=0.1  Score=35.08  Aligned_cols=65  Identities=20%  Similarity=0.276  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+.++|..|-....+.|+.+-+..++..+|++++++.  .+...+....-|.|+.+||+..|..+
T Consensus        26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~--~~~~~~D~d~dg~I~~~EF~~~~~~~   90 (91)
T 2pmy_A           26 LARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAE--AVFQRLDADRDGAITFQEFARGFLGS   90 (91)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHH--HHHHHHCTTCSSEECHHHHTHHHHHT
T ss_pred             HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCcCHHHHH--HHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence            467888999995444469999999999999997654433  34445667778999999999988763

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=94.83  E-value=0.23  Score=37.45  Aligned_cols=66  Identities=2%  Similarity=-0.060  Sum_probs=51.2

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+-..+....-|.|+.+||+..+..+
T Consensus        93 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  158 (191)
T 1y1x_A           93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV  158 (191)
T ss_dssp             HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence            567778888843334689999999999999987766666666667777778899999999988763

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=94.83  E-value=0.22  Score=33.88  Aligned_cols=66  Identities=5%  Similarity=0.041  Sum_probs=47.3

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHc---CCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL---gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ....+..+|..|-......|+.+-+.+++..+   |..+.+-.+-.+-..+....-|.|+.+||+..|+
T Consensus        39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 1rro_A           39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             CHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence            46778888888843334588888888888888   5666555555555566667778888888887664

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=94.82  E-value=0.29  Score=35.48  Aligned_cols=79  Identities=9%  Similarity=0.044  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCC-CCCCHHHHHHHHhhCccccccccHHHHHhhhhhc--CCCcHHHHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL--GIDSLDKFRE  132 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv-~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l--~~dsl~~lk~  132 (177)
                      ...|.++|..|-......|+.+-+..++..+|+ .|..-.+-.+....    -|.|+.+||+..|...  +.++...++.
T Consensus        24 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~~~~~~l~~   99 (166)
T 2mys_B           24 IEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGADPEDVIMG   99 (166)
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccCCcHHHHHH
Confidence            567888999984434469999999999999999 88654443333322    5899999999998865  2345555665


Q ss_pred             HHHHHH
Q 030467          133 RISFMR  138 (177)
Q Consensus       133 ~l~~l~  138 (177)
                      ....+.
T Consensus       100 ~F~~~D  105 (166)
T 2mys_B          100 AFKVLD  105 (166)
T ss_pred             HHHHhC
Confidence            555443

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=94.80  E-value=0.12  Score=36.58  Aligned_cols=118  Identities=8%  Similarity=0.067  Sum_probs=79.4

Q ss_pred             CCCccHHHHHH-HHHHh----hC-CCHHHHHHHHHhCCCCcccc-chhhccc----cCCC--------------Cc----
Q 030467            3 KLSRSNRDKLQ-QFVSI----TG-ASEKAALQALKASDWHLEGA-FDVFYSQ----PQSK--------------SL----   53 (177)
Q Consensus         3 ~l~~~q~~~i~-~F~~~----T~-~s~~~A~~~L~~~~w~le~A-~~~ff~~----~~~~--------------~~----   53 (177)
                      .|++.+.+.+. .|..+    .| .+...-..+|+..++.+... +...|..    ..+.              ..    
T Consensus         4 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~   83 (153)
T 3ox6_A            4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETAD   83 (153)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHH
T ss_pred             cCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccc
Confidence            56777766663 45444    23 35666777777777655432 2223221    1110              00    


Q ss_pred             -CCHHHHHHHHHHhcCCCCCccCHHHHHHHHhH-cCCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           54 -TDTRHLEELYNRYKDPYLDMILVDGITLLCND-LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        54 -~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~ed-Lgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                       .....+..+|..|-....+.|+.+-+.+++.. +|..+.+-.+-.+...+....-|.|+.+||+.-|+
T Consensus        84 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  152 (153)
T 3ox6_A           84 MIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS  152 (153)
T ss_dssp             HHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred             cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence             12467888999994434469999999999999 89988877777777888888899999999998765

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=94.77  E-value=0.099  Score=37.22  Aligned_cols=67  Identities=12%  Similarity=0.031  Sum_probs=29.9

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhH-cCCCCCCHHHHHHHHh----hCccccccccHHHHHhhhhhcC
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCND-LQVDPQDIVMLVVSWH----MKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~ed-Lgv~~ed~~~L~la~~----l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ..+..+|..|-....+.|+.+-+.+++.. +|..+.+-.+-.+...    +....-|.|+.+||+..+..++
T Consensus        75 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~  146 (155)
T 3ll8_B           75 QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLD  146 (155)
T ss_dssp             HHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGC
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccC
Confidence            44455555542222235555555555544 3444333333333333    4444445555555555555544

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=94.76  E-value=0.092  Score=37.67  Aligned_cols=66  Identities=9%  Similarity=0.169  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...|.++|..|-......|+.+-+...+..+|..|....+--+...+....-|.|+.+||+..|..
T Consensus         5 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   70 (143)
T 2obh_A            5 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQ   70 (143)
T ss_dssp             HHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHH
Confidence            467888999984433469999999999999999998777777777778888899999999988765

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=94.72  E-value=0.26  Score=36.14  Aligned_cols=66  Identities=12%  Similarity=0.157  Sum_probs=52.9

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+..+
T Consensus        74 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  139 (172)
T 2znd_A           74 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL  139 (172)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            567788888843334689999999999999988776666666677777888999999999998764

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=94.64  E-value=0.27  Score=33.43  Aligned_cols=66  Identities=8%  Similarity=0.000  Sum_probs=46.3

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHc---CCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL---gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ....+..+|..|-......|+.+-+.+++..+   |..+.+-.+-.+-..+....-|.|+.+||+..|+
T Consensus        40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  108 (109)
T 1bu3_A           40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK  108 (109)
T ss_dssp             CHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            45678888888833333578888888888888   6666555555555566666778888888887654

>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}

Probab=94.62  E-value=0.022  Score=36.21  Aligned_cols=39  Identities=28%  Similarity=0.410  Sum_probs=33.9

Q ss_pred             HHHHHHHHHhhCC-CHHHHHHHHHhCCCCccccchhhcccc
Q 030467            9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         9 ~~~i~~F~~~T~~-s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      .+.|++.+++ |- ++..|++.|+.++||++.|++--|..+
T Consensus        12 ~~~l~~L~~M-GF~~~~~~~~AL~~t~gnve~Ave~L~~~~   51 (53)
T 2knz_A           12 QQQLEQLNSM-GFINREANLQALIATGGDINAAIERLLGSQ   51 (53)
T ss_dssp             HHHHHHHHTT-TCCCHHHHHHHHHHHTSCHHHHHHHHHHCC
T ss_pred             HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHHcC
Confidence            3568999987 56 999999999999999999999888764

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=94.58  E-value=0.14  Score=35.96  Aligned_cols=62  Identities=11%  Similarity=0.092  Sum_probs=31.5

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~  119 (177)
                      ..+..+|..|-....+.|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.+||+.-+
T Consensus        84 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l  145 (147)
T 4ds7_A           84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALL  145 (147)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHH
Confidence            34555555552222245666666666666665554444433444444 455566666665544

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=94.57  E-value=0.086  Score=35.03  Aligned_cols=67  Identities=13%  Similarity=0.063  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHhc-CCCCC-ccCHHHHHHHHhH-----cCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYK-DPYLD-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~-d~~~d-~I~~dG~~~~~ed-----Lgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+.++|..|- ..... .|+.+-+.+++..     +|..+.+-.+-.+...+....-|.|+.+||+..|..+
T Consensus         8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~   81 (93)
T 1k2h_A            8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (93)
T ss_dssp             HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            467888999995 23445 8999999999998     9988876666666666677778999999999988764

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=94.56  E-value=0.1  Score=37.40  Aligned_cols=67  Identities=7%  Similarity=0.037  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+.++|..|-......|+.+-+..++..+|+.+....+-.+...+....-|.|+.+||+..+...
T Consensus        19 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~   85 (162)
T 1top_A           19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ   85 (162)
T ss_dssp             HHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHH
Confidence            4677888888743334689999999999999999887777777777888888999999999988764

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=94.54  E-value=0.19  Score=34.03  Aligned_cols=67  Identities=16%  Similarity=0.130  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHhcCCCC--CccCHHHHHHHHhH-----cCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~--d~I~~dG~~~~~ed-----Lgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...|.++|.+|-+.+.  +.|+.+-+.+++..     ||..+.+-.+--+-..+....-|.|+-+||+..|..+
T Consensus         8 ~~~l~~~F~~~D~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l   81 (92)
T 3rm1_A            8 VVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMI   81 (92)
T ss_dssp             HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            3568889999974322  49999999999999     9988877777677777788889999999999998875

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=94.53  E-value=0.09  Score=36.19  Aligned_cols=62  Identities=10%  Similarity=0.082  Sum_probs=48.0

Q ss_pred             HHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        59 l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      +.++|..+-....+.|+.+-+..++..+|..+....+-.+-..+....-|.|+.+||+..+.
T Consensus         2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~   63 (134)
T 1jfj_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG   63 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTT
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHH
Confidence            56788887433346888888888888888887766666667777777888899999988886

>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=94.51  E-value=0.021  Score=37.76  Aligned_cols=47  Identities=26%  Similarity=0.376  Sum_probs=42.0

Q ss_pred             CCCccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccccCC
Q 030467            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS   50 (177)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~~   50 (177)
                      .|++.+.+.|...++ .|-++..|++.|++.+-|+|.|+|=-|.++..
T Consensus        14 ~ls~se~e~V~~Lvs-MGFs~~qA~kALKat~~NvErAaDWLFSH~D~   60 (63)
T 1wgn_A           14 MLSPSERQCVETVVN-MGYSYECVLRAMKKKGENIEQILDYLFAHSGP   60 (63)
T ss_dssp             TCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHCSCHHHHHHHHHHHSCC
T ss_pred             hhCcchHHHHHHHHH-cCCCHHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence            478899999999986 58999999999999999999999999988754

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=94.48  E-value=0.18  Score=36.54  Aligned_cols=65  Identities=11%  Similarity=0.166  Sum_probs=42.0

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ..+..+|..|-....+.|+.+-+.+++..+|....+-.+-.+...+....-|.|+.+||+.-|+.
T Consensus       101 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  165 (169)
T 3qrx_A          101 EEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK  165 (169)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            45666677763323357777777777777776665555555555666666777777777776654

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=94.48  E-value=0.081  Score=34.79  Aligned_cols=67  Identities=15%  Similarity=0.136  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHhcC-CCCC-ccCHHHHHHHHhH---cCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKD-PYLD-MILVDGITLLCND---LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d-~~~d-~I~~dG~~~~~ed---Lgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+.++|..|-. .... .|+.+-+.+.+..   +|..+.+..+-.+...+....-|.|+.+||+..|..+
T Consensus         9 ~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   80 (90)
T 1k8u_A            9 IGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL   80 (90)
T ss_dssp             HHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            3578889999962 4446 8999999999997   9987776666666666677778999999999988764

>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2

Probab=94.47  E-value=0.025  Score=37.62  Aligned_cols=37  Identities=22%  Similarity=0.088  Sum_probs=33.6

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhc
Q 030467            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff   45 (177)
                      .+.|.+.++.||++-..|..-|+.++||++.|+.---
T Consensus        10 ~~~Vk~LRe~TGag~~dcKkAL~e~~GDi~~Ai~~Lr   46 (64)
T 2cp9_A           10 KELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLH   46 (64)
T ss_dssp             CHHHHHHHHHHCCCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence            3679999999999999999999999999999997653

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=94.41  E-value=0.51  Score=35.70  Aligned_cols=79  Identities=9%  Similarity=0.005  Sum_probs=58.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC--CCcHHHHHH
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG--IDSLDKFRE  132 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~--~dsl~~lk~  132 (177)
                      ....|.++|..|-......|+.+-+..++..||+.+..-.+-.+...+    -|.|+.++|+..|...-  .++...++.
T Consensus        55 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l~~  130 (196)
T 3dtp_E           55 QVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDEEDVIVN  130 (196)
T ss_dssp             THHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCCHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCcHHHHHH
Confidence            467899999999443446999999999999999999776655555444    78999999999998742  344555555


Q ss_pred             HHHHH
Q 030467          133 RISFM  137 (177)
Q Consensus       133 ~l~~l  137 (177)
                      ....+
T Consensus       131 ~F~~~  135 (196)
T 3dtp_E          131 AFNLF  135 (196)
T ss_dssp             HHHTT
T ss_pred             HHHHH
Confidence            44433

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=94.25  E-value=0.11  Score=33.06  Aligned_cols=66  Identities=12%  Similarity=0.139  Sum_probs=49.5

Q ss_pred             CHHHHHHHHHHhcC-CCCC-ccCHHHHHHHHhH-cCCC---CCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKD-PYLD-MILVDGITLLCND-LQVD---PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d-~~~d-~I~~dG~~~~~ed-Lgv~---~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....+.++|..|-. .... .|+.+-+..++.. +|..   ++.+..  +...+....-|.|+.+||+..|..+
T Consensus         5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~--~~~~~D~~~dg~i~~~eF~~~~~~~   76 (78)
T 1cb1_A            5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDD--LFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSH--HHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHH--HHHHhcCCCCCCCcHHHHHHHHHHh
Confidence            35789999999964 4456 8999999999985 8853   333333  3345566778999999999988764

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=94.22  E-value=0.17  Score=39.56  Aligned_cols=66  Identities=6%  Similarity=-0.057  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...+.++|..+-....+.|+.+-+.+.+..+|..+.+-.+-.+...+....-|.|+.+||+..+..
T Consensus        50 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~  115 (220)
T 3sjs_A           50 YTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKF  115 (220)
T ss_dssp             HHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            467778888884434468999999999888998887767767777777777888888888887765

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=94.19  E-value=0.47  Score=35.03  Aligned_cols=111  Identities=11%  Similarity=-0.035  Sum_probs=71.7

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhC-----CCCccccchhhcccc--CCCCcCCHHHHHHHHHHhcCCCCCccCHHHHHH
Q 030467            9 RDKLQQFVSITGASEKAALQALKAS-----DWHLEGAFDVFYSQP--QSKSLTDTRHLEELYNRYKDPYLDMILVDGITL   81 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~-----~w~le~A~~~ff~~~--~~~~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~   81 (177)
                      ++.++.+...|+.++..-..+.+..     +..+  ..+.|-..-  -.........+..+|..+-....+.|+.+-...
T Consensus        10 ~~~l~~l~~~~~~~~~~i~~~~~~fd~~~~~G~i--~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~   87 (190)
T 1fpw_A           10 KDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQL--AREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFIT   87 (190)
T ss_dssp             THHHHHHTTTCCSTHHHHHHHHHHHHHHCTTCCE--EHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHH
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCcC--cHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHH
Confidence            4567777777888877655554432     2122  111111100  000112345688899988443446899999999


Q ss_pred             HHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           82 LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        82 ~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ++..++..+..-.+-.+-..+....-|.|+.+||+..+..
T Consensus        88 ~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~  127 (190)
T 1fpw_A           88 VLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS  127 (190)
T ss_dssp             HHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred             HHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            9999998776555555555667788899999999999988

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=94.08  E-value=0.051  Score=35.66  Aligned_cols=64  Identities=13%  Similarity=0.041  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~  119 (177)
                      ...+.++|..|-......|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.+||+..+
T Consensus        22 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~   85 (87)
T 1s6j_A           22 IGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             TTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3567889999843334699999999999999998877777777777888888999999998754

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=94.04  E-value=0.22  Score=35.60  Aligned_cols=67  Identities=7%  Similarity=0.025  Sum_probs=44.5

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHh--hCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWH--MKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~--l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ....+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...  +....-|.|+.+||+..+..
T Consensus        82 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  150 (156)
T 1wdc_C           82 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA  150 (156)
T ss_dssp             CHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence            34667777777733333578888888888888776654444444444  56666778888888877765

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=93.90  E-value=0.3  Score=43.50  Aligned_cols=82  Identities=13%  Similarity=0.151  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc--CCCcHHHHHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL--GIDSLDKFRER  133 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l--~~dsl~~lk~~  133 (177)
                      -..|.++|+.|=......|+.+=+...+..||++|.+-.+--|-..+....-|.|+-+||+..+...  ..++.+.++..
T Consensus       301 I~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreA  380 (440)
T 3u0k_A          301 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREA  380 (440)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHH
Confidence            3667888998844344699999999999999999988888888888889999999999999988653  23444555554


Q ss_pred             HHHH
Q 030467          134 ISFM  137 (177)
Q Consensus       134 l~~l  137 (177)
                      ...+
T Consensus       381 Fk~f  384 (440)
T 3u0k_A          381 FRVF  384 (440)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4444

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=93.89  E-value=0.2  Score=35.12  Aligned_cols=67  Identities=7%  Similarity=0.025  Sum_probs=47.0

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ....+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..|..
T Consensus        74 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  140 (145)
T 2bl0_B           74 QSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT  140 (145)
T ss_dssp             GHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence            4567788888873333357888888888888887665555555555566666788888888887765

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=93.87  E-value=0.26  Score=36.75  Aligned_cols=80  Identities=9%  Similarity=0.080  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCCCcHHHHHHHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERIS  135 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~dsl~~lk~~l~  135 (177)
                      ...+.++|..+-......|+.+-+..++..+|++++.  +-.+-..+....-|.|+.+||+..|..+.-.+-+.++....
T Consensus        38 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~--~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~F~  115 (180)
T 3mse_B           38 IKYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWD--INRILQALDINDRGNITYTEFMAGCYRWKNIESTFLKAAFN  115 (180)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHH--HHHHHHHHCTTCCSEECHHHHHHHHSCCTTC--CHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCHHH--HHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCHHHHHHHHH
Confidence            5778889999843334699999999999999988643  33444556677789999999999888764433344555544


Q ss_pred             HH
Q 030467          136 FM  137 (177)
Q Consensus       136 ~l  137 (177)
                      .+
T Consensus       116 ~~  117 (180)
T 3mse_B          116 KI  117 (180)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=93.86  E-value=0.18  Score=37.03  Aligned_cols=122  Identities=9%  Similarity=0.103  Sum_probs=71.9

Q ss_pred             CCCccHHHHHH-HHHHh----hC-CCHHHHHHHHHhCCCCccc-cchhhccc---cCCCC----------------cCCH
Q 030467            3 KLSRSNRDKLQ-QFVSI----TG-ASEKAALQALKASDWHLEG-AFDVFYSQ---PQSKS----------------LTDT   56 (177)
Q Consensus         3 ~l~~~q~~~i~-~F~~~----T~-~s~~~A~~~L~~~~w~le~-A~~~ff~~---~~~~~----------------~~~~   56 (177)
                      .|++.+...++ .|..+    .| .+...-..+|+..++++.. .+...|..   ...+.                ....
T Consensus         4 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~   83 (179)
T 2f2o_A            4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE   83 (179)
T ss_dssp             --CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccH
Confidence            46666666654 44443    22 3566777778877765432 23333321   11110                0112


Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCC
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~  124 (177)
                      ..+..+|..|-....+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+.-|...+.
T Consensus        84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~  151 (179)
T 2f2o_A           84 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKGG  151 (179)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC---
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCC
Confidence            45777888883333458999999999999987776655556666677777889999999988877654

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=93.79  E-value=0.46  Score=37.01  Aligned_cols=65  Identities=9%  Similarity=-0.076  Sum_probs=38.8

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..+..+|..|-....+.|+.+-+.+++..+|....+-.+-.+...+. ..-|.|+.+||+..|..+
T Consensus       117 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l  181 (220)
T 3sjs_A          117 ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAFA  181 (220)
T ss_dssp             HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH
Confidence            44566666663223357777777777777776665544444445555 555777777777766553

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=93.79  E-value=0.49  Score=36.66  Aligned_cols=69  Identities=10%  Similarity=0.021  Sum_probs=50.3

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCC------HHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD------IVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        53 ~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed------~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ....+.|.++|..|-......|+.+-+..++..||+.|..      ..+-.+...+....-|.|+.+||+..|..
T Consensus        12 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~   86 (263)
T 2f33_A           12 LITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPT   86 (263)
T ss_dssp             CCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTS
T ss_pred             cccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence            3457789999999954344689999999999988876542      33344555667777888999999887753

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=93.74  E-value=0.19  Score=38.32  Aligned_cols=81  Identities=6%  Similarity=-0.020  Sum_probs=51.4

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC-CCcHHHHHHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG-IDSLDKFRERI  134 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~-~dsl~~lk~~l  134 (177)
                      ...|.++|..|-....+.|+.+-+...+..+|..+....+-.+...+....-|.|+.+||+..+..+. ..+.+.++...
T Consensus        56 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F  135 (197)
T 3pm8_A           56 INNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPF  135 (197)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHH
Confidence            56788899998433346999999999999999998887777777888888889999999998876542 22333444443


Q ss_pred             HH
Q 030467          135 SF  136 (177)
Q Consensus       135 ~~  136 (177)
                      ..
T Consensus       136 ~~  137 (197)
T 3pm8_A          136 KF  137 (197)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=93.74  E-value=0.05  Score=38.87  Aligned_cols=68  Identities=16%  Similarity=0.147  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCcc--ccccccHHHHHhhhhhcC
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA--TMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~--~~g~~tr~eF~~g~~~l~  123 (177)
                      ...+.++|..|-......|+.+-+...+..+|+.|....+-.+...+...  .-|.|+.+||+..+....
T Consensus         9 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~   78 (151)
T 1w7j_B            9 LEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVA   78 (151)
T ss_dssp             --CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHh
Confidence            45688999999544446999999999999999999876665555555555  678999999999998754

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=93.74  E-value=0.14  Score=36.88  Aligned_cols=67  Identities=12%  Similarity=0.029  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCC-CCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv-~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+..+|..|-....+.|+.+-+...+..+|+ .+.+-.+-.+-..+....-|.|+.+||+.-|..+
T Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~  106 (135)
T 3h4s_E           39 VSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRL  106 (135)
T ss_dssp             HHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Confidence            467889999994333469999999999999997 6666555566666777788999999999999886

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=93.73  E-value=0.29  Score=34.92  Aligned_cols=63  Identities=14%  Similarity=0.144  Sum_probs=37.0

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~  119 (177)
                      ..+.++|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..|
T Consensus        79 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~  141 (143)
T 2obh_A           79 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM  141 (143)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            455666666622223467777777777777665554444444445555566677777776654

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=93.71  E-value=0.17  Score=35.79  Aligned_cols=67  Identities=10%  Similarity=0.130  Sum_probs=54.2

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ....+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+.-|..
T Consensus        81 ~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~  147 (148)
T 1m45_A           81 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR  147 (148)
T ss_dssp             CTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred             cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            4578999999994333469999999999999999887766666666777778899999999987753

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=93.69  E-value=0.57  Score=33.38  Aligned_cols=68  Identities=9%  Similarity=0.038  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHH----HhHcCCCCCCHHHHHH-----------HHhhCccccccccHHHHHhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLL----CNDLQVDPQDIVMLVV-----------SWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~----~edLgv~~ed~~~L~l-----------a~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ...|.++|..|-......|+.+-+...    +..+|+.|.+..+-.+           -..+....-|.|+.+||+..+.
T Consensus         3 ~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~   82 (166)
T 3akb_A            3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAV   82 (166)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTHH
T ss_pred             HHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            367889999994333468999988886    5677999877555433           3566777789999999999988


Q ss_pred             hcC
Q 030467          121 SLG  123 (177)
Q Consensus       121 ~l~  123 (177)
                      ...
T Consensus        83 ~~~   85 (166)
T 3akb_A           83 KRL   85 (166)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            764

>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1

Probab=93.67  E-value=0.046  Score=35.51  Aligned_cols=39  Identities=23%  Similarity=0.355  Sum_probs=32.9

Q ss_pred             HHHHHHHHHhhCC-CHHHHHHHHHhCCCCccccchhhcccc
Q 030467            9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         9 ~~~i~~F~~~T~~-s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      .+.|++.+++ |- ++..+++.|+.++||++.|++--|..+
T Consensus        18 ~~qi~~L~~M-GF~d~~~~~~AL~~~~gnve~Ave~L~~~~   57 (58)
T 1wr1_B           18 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLNGD   57 (58)
T ss_dssp             HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCC
Confidence            4578889887 75 577889999999999999999888764

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=93.49  E-value=0.35  Score=35.61  Aligned_cols=51  Identities=6%  Similarity=0.060  Sum_probs=29.0

Q ss_pred             CccCHHHHHHHHhHcCCC-CCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           72 DMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        72 d~I~~dG~~~~~edLgv~-~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..|+.+-+..++..+|.. +....+-.+-..+....-|.|+.+||+..+..+
T Consensus        34 G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~   85 (183)
T 1s6c_A           34 GVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSIL   85 (183)
T ss_dssp             SEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence            466666666666666654 333333334445555556666666666666554

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=93.44  E-value=0.15  Score=35.91  Aligned_cols=100  Identities=10%  Similarity=0.055  Sum_probs=68.1

Q ss_pred             CHHHHHHHHHhCCCCccc-cchhhccccCC---------------CCcCCHHHHHHHHHHhcCCCCCccCHHHHHHHHhH
Q 030467           22 SEKAALQALKASDWHLEG-AFDVFYSQPQS---------------KSLTDTRHLEELYNRYKDPYLDMILVDGITLLCND   85 (177)
Q Consensus        22 s~~~A~~~L~~~~w~le~-A~~~ff~~~~~---------------~~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~ed   85 (177)
                      +...-..+|+..+.++.. .+...+....+               ........+..+|..|-....+.|+.+-+.+++..
T Consensus        25 ~~~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~  104 (143)
T 3j04_B           25 DKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTT  104 (143)
T ss_dssp             CHHHHHHHHHHTSCCCCHHHHHTTTTTSSSCCCHHHHHHHHHHTTTSSCCHHHHHHHHTTSCSSSCCCCCTTTHHHHHHT
T ss_pred             CHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH
Confidence            566667777776665432 23333332111               12234577888888884333468999999999999


Q ss_pred             cCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           86 LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        86 Lgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      +|..+.+-.+-.+...+....-|.|+.+||+..|+.
T Consensus       105 ~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  140 (143)
T 3j04_B          105 MGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH  140 (143)
T ss_dssp             SSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred             cCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence            998887766666777777778889999999988765

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=93.42  E-value=0.37  Score=35.39  Aligned_cols=64  Identities=11%  Similarity=-0.017  Sum_probs=42.0

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHc-C-------CCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDL-Q-------VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL-g-------v~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      +++.++|..|- .....|+.+-+...+..+ |       ..+..-.+-.+...+....-|.|+.+||+..|..
T Consensus         4 ~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~   75 (173)
T 1alv_A            4 RQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN   75 (173)
T ss_dssp             HHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHH
Confidence            46777777774 333578888888877776 6       4444444444555666666777777777776654

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=93.40  E-value=0.77  Score=33.11  Aligned_cols=98  Identities=12%  Similarity=0.061  Sum_probs=61.7

Q ss_pred             HHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCC--------HHHHHHHHhhCccccccccHHHHHhhhhhcCCCcHHHHH
Q 030467           60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQD--------IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR  131 (177)
Q Consensus        60 ~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed--------~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~dsl~~lk  131 (177)
                      ..+|..+-....+.|+.+-...++..+...+..        -.+-.+-..+....-|.|+++||...+..+| -+-+.++
T Consensus        61 ~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g-~~~~~~~  139 (176)
T 1nya_A           61 DYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG-MSKAEAA  139 (176)
T ss_dssp             HHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT-CCHHHHH
T ss_pred             HHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC-CCHHHHH
Confidence            377777744334589999998888877666553        1223333455667788999999999999988 5666666


Q ss_pred             HHHHHHHHHccChhHHHHHHHHHhhhh
Q 030467          132 ERISFMRAELKDEQKFREIYNFAFAWA  158 (177)
Q Consensus       132 ~~l~~l~~~l~~~~~Fk~iY~ftF~f~  158 (177)
                      ..+..+...=...-.|.++..+.-.+.
T Consensus       140 ~~~~~~D~d~dg~i~~~ef~~~~~~~~  166 (176)
T 1nya_A          140 EAFNQVDTNGNGELSLDELLTAVRDFH  166 (176)
T ss_dssp             HHHHHHCTTCSSEEEHHHHHHHHSCCS
T ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHHHh
Confidence            555554322222123666666554444

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=93.37  E-value=0.071  Score=37.90  Aligned_cols=65  Identities=6%  Similarity=0.087  Sum_probs=50.8

Q ss_pred             HHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhh-CccccccccHHHHHhhhhhc
Q 030467           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHM-KAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        58 ~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l-~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .+.++|..|-......|+.+-+..++..+|+.|....+-.+...+ ....-|.|+.+||+..+...
T Consensus         5 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~   70 (148)
T 1m45_A            5 ANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVN   70 (148)
T ss_dssp             CCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHT
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHH
Confidence            355678888443446999999999999999999877777777777 77788999999999998875

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=93.34  E-value=0.15  Score=37.61  Aligned_cols=68  Identities=15%  Similarity=0.124  Sum_probs=52.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHH-----HHHhHcCCCCCCH-----HHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGIT-----LLCNDLQVDPQDI-----VMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~-----~~~edLgv~~ed~-----~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...++.++|..|-......|+.+-+.     ..+..+|+.|.+.     .+-.+...+....-|.|+.+||+..|..+
T Consensus        14 ~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~   91 (191)
T 1uhk_A           14 WIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKL   91 (191)
T ss_dssp             HHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHH
Confidence            35778999999943334699999998     7899999998765     34445556677778999999999987764

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=93.33  E-value=0.24  Score=34.77  Aligned_cols=67  Identities=12%  Similarity=0.081  Sum_probs=28.0

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHH-HhhCccccccccHHHHHhhhhhcC
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVS-WHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la-~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ..+..+|..|-....+.|+.+-...++...--.+.....+.-+ ..+-...-|.||++||...++.+|
T Consensus        42 ~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g  109 (142)
T 2bl0_C           42 AAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLG  109 (142)
T ss_dssp             HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSS
T ss_pred             HHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC
Confidence            4455555554322223555555555554321111122222222 233334445555555555555554

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=93.31  E-value=0.34  Score=33.98  Aligned_cols=66  Identities=6%  Similarity=-0.024  Sum_probs=46.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ....+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+... ....-|.|+.+||+.-|..
T Consensus        83 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~  148 (149)
T 2mys_C           83 TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS  148 (149)
T ss_pred             hHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence            35677888888843334589999999999888876654444444444 6667788999999877653

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=93.27  E-value=0.16  Score=38.51  Aligned_cols=65  Identities=12%  Similarity=0.035  Sum_probs=36.8

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ..|.++|..|-......|+.+-+..++..+|+.+.+-.+-.+...+....-|.|+.+||+..+..
T Consensus        10 ~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~   74 (188)
T 1s6i_A           10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVH   74 (188)
T ss_dssp             CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTT
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHH
Confidence            44566666653222346666666666666666665544445555555555566666666665544

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=93.26  E-value=0.31  Score=36.72  Aligned_cols=64  Identities=9%  Similarity=0.016  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ...|.++|..|-......|+.+-+..+ ..||++|.   +-.+...+....-|.|+.+||+..+....
T Consensus        28 ~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~   91 (202)
T 2bec_A           28 LLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFR   91 (202)
T ss_dssp             HHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGS
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhc
Confidence            456777888884333468999998888 88898876   44455566777788999999999988764

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=93.22  E-value=1.8  Score=31.78  Aligned_cols=110  Identities=15%  Similarity=-0.003  Sum_probs=70.3

Q ss_pred             HHHHHHHHhhCCCHHHHHHHHHhC-----CCCccccchhhcccc--CCCCcCCHHHHHHHHHHhcCCCCCccCHHHHHHH
Q 030467           10 DKLQQFVSITGASEKAALQALKAS-----DWHLEGAFDVFYSQP--QSKSLTDTRHLEELYNRYKDPYLDMILVDGITLL   82 (177)
Q Consensus        10 ~~i~~F~~~T~~s~~~A~~~L~~~-----~w~le~A~~~ff~~~--~~~~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~   82 (177)
                      +.+..++..++.++.....+.+..     +..+.  .+.|-..-  -.........+..+|..+-....+.|+.+-...+
T Consensus        11 ~el~~~~~~~~~~~~el~~~f~~~D~~~~~G~i~--~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~   88 (190)
T 2l2e_A           11 DQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLN--KSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICA   88 (190)
T ss_dssp             HHHHHHHHHHCSCSHHHHHHHHHHHHHSCCCEEC--HHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHH
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCC--HHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHH
Confidence            457777777888877666655542     22221  12221100  0001123567888999985444468999999999


Q ss_pred             HhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           83 CNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        83 ~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      +..++..+..-.+-.+-..+....-|.|+.+||...+..
T Consensus        89 ~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~  127 (190)
T 2l2e_A           89 LSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA  127 (190)
T ss_dssp             HTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred             HHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence            999887665444444445667778899999999998877

>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A

Probab=93.21  E-value=0.066  Score=33.04  Aligned_cols=37  Identities=24%  Similarity=0.389  Sum_probs=31.0

Q ss_pred             HHHHHHHHHhhCC-CHHHHHHHHHhCCCCccccchhhcc
Q 030467            9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYS   46 (177)
Q Consensus         9 ~~~i~~F~~~T~~-s~~~A~~~L~~~~w~le~A~~~ff~   46 (177)
                      .+.|.+.+++ |- ++..+++.|+.++||++.|++-.|+
T Consensus         8 ~~~i~~L~~M-GF~d~~~~~~AL~~~~gnv~~Ave~L~~   45 (46)
T 2bwb_A            8 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLN   45 (46)
T ss_dssp             HHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHHC
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHc
Confidence            4568888887 75 5777899999999999999987764

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=93.20  E-value=0.16  Score=38.33  Aligned_cols=81  Identities=7%  Similarity=0.018  Sum_probs=55.5

Q ss_pred             HHHHHHHHHhcCC-CCCccCHHHHHHHHhHcCCCCCCHH-HHHHHHhhCccccccccHHHHHhhhhhcCCCc-HHHHHHH
Q 030467           57 RHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIV-MLVVSWHMKAATMCEFSKQEFIGGLQSLGIDS-LDKFRER  133 (177)
Q Consensus        57 ~~l~~lF~~Y~d~-~~d~I~~dG~~~~~edLgv~~ed~~-~L~la~~l~a~~~g~~tr~eF~~g~~~l~~ds-l~~lk~~  133 (177)
                      ..+.++|..|-.. ....|+.+-+..++..+|++|.+.. +--+-..+....-|.|+.+||+..|..++... .+.++..
T Consensus        14 ~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~   93 (198)
T 2r2i_A           14 TECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWY   93 (198)
T ss_dssp             SCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHH
Confidence            4567777777533 2458999999999998988876543 44455566777788999999999988876543 3344444


Q ss_pred             HHHH
Q 030467          134 ISFM  137 (177)
Q Consensus       134 l~~l  137 (177)
                      +..+
T Consensus        94 F~~~   97 (198)
T 2r2i_A           94 FKLY   97 (198)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            4433

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=93.18  E-value=0.13  Score=34.66  Aligned_cols=65  Identities=14%  Similarity=0.062  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHhcC-CCCC-ccCHHHHHHHH-hHcCCC--CCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKD-PYLD-MILVDGITLLC-NDLQVD--PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d-~~~d-~I~~dG~~~~~-edLgv~--~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...|.++|..|-. .... .|+.+-+..++ ..+|..  .+++.  .+...+....-|.|+.+||+..|..+
T Consensus         9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~--~l~~~~D~d~dG~I~~~EF~~~~~~~   78 (93)
T 1xk4_A            9 LNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGAD--VWFKELDINTDGAVNFQEFLILVIKM   78 (93)
T ss_dssp             HHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHH--HHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHH--HHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            3578889999965 4446 89999999999 789843  34443  33445666778999999999998765

>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.15  E-value=0.077  Score=32.55  Aligned_cols=39  Identities=28%  Similarity=0.508  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      ..+.|+++++ .|-++..|++.|+.++ |++.|++-.+++|
T Consensus         9 ~~~~v~~L~~-MGF~~~~a~~AL~~~~-n~e~A~~~L~~h~   47 (47)
T 2ekk_A            9 NQQQLQQLMD-MGFTREHAMEALLNTS-TMEQATEYLLTHP   47 (47)
T ss_dssp             CHHHHHHHHH-HHCCHHHHHHHHHHSC-SHHHHHHHHHTCC
T ss_pred             CHHHHHHHHH-cCCCHHHHHHHHHHcC-CHHHHHHHHHcCC
Confidence            3567999999 4999999999999998 9999998877654

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=93.14  E-value=0.34  Score=33.18  Aligned_cols=67  Identities=13%  Similarity=0.168  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHhcCCC--CCccCHHHHHHHHhH-----cCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPY--LDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~--~d~I~~dG~~~~~ed-----Lgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...|.++|..|-..+  ...|+.+-+.+++..     +|..+.+-.+--+...+....-|.|+-+||+..|..+
T Consensus         8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   81 (95)
T 1j55_A            8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI   81 (95)
T ss_dssp             HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence            457888999995223  249999999999986     6766655455555566777888999999999998753

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=93.13  E-value=0.41  Score=34.50  Aligned_cols=121  Identities=10%  Similarity=0.114  Sum_probs=79.1

Q ss_pred             CCCCCccHHHHHH-HHHHh-h---CC-CHHHHHHHHHhCCCCcccc-chhhcc----ccC---------------CCCcC
Q 030467            1 MHKLSRSNRDKLQ-QFVSI-T---GA-SEKAALQALKASDWHLEGA-FDVFYS----QPQ---------------SKSLT   54 (177)
Q Consensus         1 m~~l~~~q~~~i~-~F~~~-T---~~-s~~~A~~~L~~~~w~le~A-~~~ff~----~~~---------------~~~~~   54 (177)
                      |..||+.|.+.++ .|..+ +   |. +...-..+|+..++++..+ +...+.    +..               .....
T Consensus         1 Ms~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~   80 (148)
T 2lmt_A            1 MSELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETD   80 (148)
T ss_dssp             CCSCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTT
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccC
Confidence            7889998877764 45554 1   11 3444556666666654332 222221    110               11223


Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ....|.++|..|=....+.|+.+-+.+.+..+|..+.+..+-.+...+....=|.|+.+||+.-|.+
T Consensus        81 ~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~  147 (148)
T 2lmt_A           81 TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ  147 (148)
T ss_dssp             THHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            4567888899884434468999999999999998887777666667777778899999999976653

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=93.10  E-value=0.25  Score=36.25  Aligned_cols=67  Identities=10%  Similarity=0.085  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+.++|..|-......|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.+||+..|...
T Consensus        47 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~  113 (147)
T 1wy9_A           47 LEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK  113 (147)
T ss_dssp             HHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            4678888988843334699999999999999998877666666667777888999999999988653

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=93.09  E-value=0.26  Score=36.21  Aligned_cols=67  Identities=12%  Similarity=0.101  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+.++|..|-......|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.+||+..|...
T Consensus        49 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~  115 (150)
T 2jjz_A           49 LTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK  115 (150)
T ss_dssp             HHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS
T ss_pred             HHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh
Confidence            5778889998843334699999999999999998876666666666677778999999999998764

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=93.07  E-value=0.43  Score=34.51  Aligned_cols=68  Identities=3%  Similarity=-0.219  Sum_probs=45.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....+..+|..|-......|+.+-+.+++..+|....+-.+-.+...+....-|.|+.+||+..|...
T Consensus        93 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~  160 (166)
T 2mys_B           93 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG  160 (166)
T ss_pred             cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhc
Confidence            34667777877733333578888888888888766554444444455556667788888888777653

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=93.05  E-value=0.22  Score=36.97  Aligned_cols=67  Identities=15%  Similarity=0.215  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHH-----HHHhHcCCCCCCH-----HHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGIT-----LLCNDLQVDPQDI-----VMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~-----~~~edLgv~~ed~-----~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+.++|..|-......|+.+-+.     ..+..+|+.|.+.     .+-.+...+....-|.|+.+||+..|..+
T Consensus        19 ~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~   95 (195)
T 1qv0_A           19 IKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQL   95 (195)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHHH
Confidence            5778899999943334699999998     7889999998665     34445556677778999999999887653

>2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.05  E-value=0.075  Score=36.90  Aligned_cols=40  Identities=20%  Similarity=0.336  Sum_probs=35.6

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      ..+.|.+.+++ |-++..|++.|..++||++.|++-.|++.
T Consensus        29 ~e~~i~~L~~M-GF~~~~a~~AL~~t~~nve~A~ewL~~~~   68 (83)
T 2dai_A           29 DEAALRQLTEM-GFPENRATKALQLNHMSVPQAMEWLIEHA   68 (83)
T ss_dssp             CHHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHHGG
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            45779999995 99999999999999999999999888764

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=93.01  E-value=0.38  Score=33.32  Aligned_cols=67  Identities=13%  Similarity=0.145  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHhcCCCC-C-ccCHHHHHHHHhH-----cCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYL-D-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~-d-~I~~dG~~~~~ed-----Lgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...|.++|..|-+.+. + .|+.+-+..++..     ||..+.+-.+--+...+....-|.|+-+||+..|..+
T Consensus         9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   82 (99)
T 2y5i_A            9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (99)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            4578889999953333 3 8999999999986     7777766555566667778888999999999998865

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=92.97  E-value=0.4  Score=36.14  Aligned_cols=68  Identities=12%  Similarity=0.032  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHc-CCCCCCHHHHHHHHh----hCccccccccHHHHHhhhhhcC
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL-QVDPQDIVMLVVSWH----MKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL-gv~~ed~~~L~la~~----l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ...+..+|..|-....+.|+.+-+.+++..+ |..+.+-.+-.+...    +....-|.|+.+||+..|...+
T Consensus       113 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~  185 (202)
T 2bec_A          113 RNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMD  185 (202)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTSC
T ss_pred             HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHhC
Confidence            5678899999944344699999999999999 977655444444444    7777889999999999988764

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=92.92  E-value=0.16  Score=36.40  Aligned_cols=104  Identities=13%  Similarity=0.113  Sum_probs=46.6

Q ss_pred             CCCccHHHHHH-HHHHh-----hC-CCHHHHHHHHHhCCCCccccchhhccccCCCCcCCHHHHHHHHHHhcCCCCCccC
Q 030467            3 KLSRSNRDKLQ-QFVSI-----TG-ASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMIL   75 (177)
Q Consensus         3 ~l~~~q~~~i~-~F~~~-----T~-~s~~~A~~~L~~~~w~le~A~~~ff~~~~~~~~~~~~~l~~lF~~Y~d~~~d~I~   75 (177)
                      .|++.+.+.++ -|..+     .| .+...-..+|+..+.++                 ....+..+|..+-....+.|+
T Consensus        11 ~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~-----------------~~~~~~~~~~~~D~~~~g~i~   73 (161)
T 1dtl_A           11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNP-----------------TPEELQEMIDEVDEDGSGTVD   73 (161)
T ss_dssp             GSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCC-----------------CHHHHHHHHHHHCTTSSSSBC
T ss_pred             hCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCC-----------------CHHHHHHHHHHhCCCCCCeEc
Confidence            45666655553 34333     22 35566666666655432                 234455555555443444555


Q ss_pred             HHHHHHHHhHcCC---CCCCHHHHHHHH-hhCccccccccHHHHHhhhhhcC
Q 030467           76 VDGITLLCNDLQV---DPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        76 ~dG~~~~~edLgv---~~ed~~~L~la~-~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      .+-...++..+.-   .+.....+.-++ .+-...-|.|+++||...+..+|
T Consensus        74 ~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g  125 (161)
T 1dtl_A           74 FDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG  125 (161)
T ss_dssp             HHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC-
T ss_pred             HHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence            5555555544322   222222222222 23334445555555555555544

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=92.89  E-value=0.84  Score=33.47  Aligned_cols=111  Identities=8%  Similarity=-0.012  Sum_probs=70.2

Q ss_pred             HHHHHHHHhhCCCHHHHHHHHHhCC-----CCccccchhhcccc--CCCCcCCHHHHHHHHHHhcCCCCCccCHHHHHHH
Q 030467           10 DKLQQFVSITGASEKAALQALKASD-----WHLEGAFDVFYSQP--QSKSLTDTRHLEELYNRYKDPYLDMILVDGITLL   82 (177)
Q Consensus        10 ~~i~~F~~~T~~s~~~A~~~L~~~~-----w~le~A~~~ff~~~--~~~~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~   82 (177)
                      +.+.+++..|+.++.....+.+..+     ..+  -.+.|-..-  -.........+..+|..+-....+.|+.+-...+
T Consensus         4 ~el~~l~~~~~~s~~~i~~l~~~fd~~d~~G~i--~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~   81 (183)
T 1s6c_A            4 EGLEQLEAQTNFTKRELQVLYRGFKNEXPSGVV--NEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTA   81 (183)
T ss_dssp             --CHHHHHHSSCCHHHHHHHHHHHHHHCTTSEE--CHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcC--CHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence            3466777778888766555554322     111  111111100  0011245778899999985444568999999999


Q ss_pred             HhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           83 CNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        83 ~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      +..++..+..-.+-.+-..+....-|.|+.+||...+..+
T Consensus        82 ~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~  121 (183)
T 1s6c_A           82 LSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI  121 (183)
T ss_dssp             HHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             HHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence            9888766544444444456677888999999999999886

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=92.81  E-value=0.29  Score=33.96  Aligned_cols=66  Identities=14%  Similarity=0.047  Sum_probs=49.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....+.++|+.|-......|+.+-+..++..+|++.+.  +--+-..+....-|.|+++||+..|..+
T Consensus         9 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~~~~--l~~i~~~~D~d~dG~i~~~EF~~~~~~~   74 (99)
T 1qjt_A            9 GNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLI--LGKIWDLADTDGKGVLSKQEFFVALRLV   74 (99)
T ss_dssp             TCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHH--HHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCHHH--HHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence            34678999999943334699999999999999975433  3333345566778999999999998764

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=92.80  E-value=0.28  Score=33.18  Aligned_cols=65  Identities=5%  Similarity=-0.004  Sum_probs=48.9

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+.++|+.|-....+.|+.+-+..++..+|++.+++.-  +-..+....-|.|+.+||+..|..+
T Consensus         8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~--i~~~~D~d~dG~i~~~EF~~~~~~~   72 (92)
T 1fi6_A            8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSH--IWELSDFDKDGALTLDEFCAAFHLV   72 (92)
T ss_dssp             HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHH--HHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHH--HHHHHCCCCCCCCCHHHHHHHHHHH
Confidence            4678888998843334699999999999999976554333  3334566778999999999998765

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=92.80  E-value=0.24  Score=37.09  Aligned_cols=69  Identities=10%  Similarity=0.024  Sum_probs=50.0

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ....+.++|..+-......|+.+-+...+..+|+.+....+-.+-..+....-|.|+.+||+..+....
T Consensus        35 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~  103 (204)
T 3e3r_A           35 GIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPM  103 (204)
T ss_dssp             -----CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCC
T ss_pred             hHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhc
Confidence            346677888888433346899999999999999888777777777777777788999999988877643

>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1

Probab=92.76  E-value=0.14  Score=34.85  Aligned_cols=40  Identities=25%  Similarity=0.441  Sum_probs=34.5

Q ss_pred             HHHHHHHHHhhCC-CHHHHHHHHHhCCCCccccchhhccccC
Q 030467            9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQPQ   49 (177)
Q Consensus         9 ~~~i~~F~~~T~~-s~~~A~~~L~~~~w~le~A~~~ff~~~~   49 (177)
                      .+.|++.+++ |- ++..+++.|+.++||++.|++-.|..+.
T Consensus        30 e~qi~qL~eM-GF~dr~~~~~AL~~t~Gnve~Ave~L~~~~~   70 (74)
T 1vej_A           30 QQELEELKAL-GFANRDANLQALVATDGDIHAAIEMLLGASG   70 (74)
T ss_dssp             HHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence            4578999987 76 6788899999999999999999998754

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=92.70  E-value=0.31  Score=33.25  Aligned_cols=66  Identities=6%  Similarity=0.057  Sum_probs=49.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....+.++|..|-....+.|+.+-+..++..+|++.+++.-  +-..+....-|.|+.+||+..|..+
T Consensus         8 ~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~--i~~~~D~d~dG~i~~~EF~~~~~~~   73 (95)
T 1c07_A            8 EKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAH--IWSLCDTKDCGKLSKDQFALAFHLI   73 (95)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHH--HHHHHCTTCSSSEETTTHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCHHHHHH--HHHHHCCCCCCcCCHHHHHHHHHHH
Confidence            45788999999943344699999999999999976544333  3334566778999999999998663

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=92.69  E-value=0.62  Score=33.12  Aligned_cols=47  Identities=11%  Similarity=0.053  Sum_probs=21.5

Q ss_pred             ccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhh
Q 030467           73 MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (177)
Q Consensus        73 ~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~  119 (177)
                      .|+.+-+.+++..+|....+-.+-.+...+....-|.|+.+||+..|
T Consensus        99 ~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~  145 (148)
T 1exr_A           99 LISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM  145 (148)
T ss_dssp             CBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHH
T ss_pred             cCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            45555555555555544433333333333344444555555555443

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=92.68  E-value=0.75  Score=33.65  Aligned_cols=64  Identities=8%  Similarity=0.086  Sum_probs=46.0

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.+||+..+..
T Consensus        77 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~  140 (173)
T 1alv_A           77 KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVR  140 (173)
T ss_dssp             HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence            55777888884433468888888899988888775544444444444 66788999999888876

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=92.60  E-value=0.3  Score=34.24  Aligned_cols=64  Identities=9%  Similarity=0.045  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+.. .-|.|+.+||+.-|.
T Consensus        75 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~  138 (140)
T 1ggw_A           75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMIL  138 (140)
T ss_dssp             HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHh
Confidence            4778888888843334588888888888888877665555555556666 678888888887765

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=92.58  E-value=0.43  Score=33.69  Aligned_cols=66  Identities=8%  Similarity=0.063  Sum_probs=47.9

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....+.++|+.|-....+.|+.+-+..++...+++.++  +--+-..+....-|.|+.+||+..|..+
T Consensus        12 ~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~--~~~i~~~~D~d~dG~I~~~EF~~~~~~~   77 (111)
T 2kgr_A           12 SRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQ--LASIWNLSDIDQDGKLTAEEFILAMHLI   77 (111)
T ss_dssp             HHHHHHHHHHTTSCSSCCEEEHHHHHHHHHTTCCCHHH--HHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhCCCCHHH--HHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            35778899999943334699999999999854444333  3334445667778999999999988764

>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=92.57  E-value=0.11  Score=34.28  Aligned_cols=38  Identities=24%  Similarity=0.351  Sum_probs=34.3

Q ss_pred             HHHHHHHHhhCCCHHHHHHHHHhCCC-Cccccchhhcccc
Q 030467           10 DKLQQFVSITGASEKAALQALKASDW-HLEGAFDVFYSQP   48 (177)
Q Consensus        10 ~~i~~F~~~T~~s~~~A~~~L~~~~w-~le~A~~~ff~~~   48 (177)
                      +.|++.+++ |-++..|++.|..++| |++.|++-.|+++
T Consensus        21 ~~i~~L~~M-GF~~~~a~~AL~~t~~~nve~A~ewL~~~~   59 (64)
T 2cpw_A           21 SALDVLLSM-GFPRARAQKALASTGGRSVQTACDWLFSHS   59 (64)
T ss_dssp             CHHHHHHHH-TCCHHHHHHHHHHTTTSCHHHHHHHHHSCC
T ss_pred             HHHHHHHHc-CCCHHHHHHHHHHcCCCCHHHHHHHHHhCC
Confidence            568999984 9999999999999999 9999999988765

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=92.55  E-value=0.18  Score=35.46  Aligned_cols=77  Identities=13%  Similarity=0.126  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC--CCcHHHHHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG--IDSLDKFRER  133 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~--~dsl~~lk~~  133 (177)
                      ...+.++|..|-......|+.+-+..++..+|+.|..-.+-.+   +.. .-|.|+.+||+..|...-  .++...++..
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~---~~~-~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~   81 (143)
T 3j04_B            6 IQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGM---MSE-APGPINFTMFLTMFGEKLNGTDPEDVIRNA   81 (143)
T ss_dssp             HHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTT---TTT-SSSCCCHHHHHHHHHHTTTSSCCHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHH---HHh-CCCCcCHHHHHHHHHHHhccCCcHHHHHHH
Confidence            4567788888843334699999999999999998865443332   222 678999999999988642  2344555544


Q ss_pred             HHH
Q 030467          134 ISF  136 (177)
Q Consensus       134 l~~  136 (177)
                      ...
T Consensus        82 F~~   84 (143)
T 3j04_B           82 FAC   84 (143)
T ss_dssp             HTT
T ss_pred             HHH
Confidence            433

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=92.54  E-value=0.75  Score=33.03  Aligned_cols=67  Identities=10%  Similarity=0.075  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHhcCCCC-C-ccCHHHHHHHHhH-----cCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYL-D-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~-d-~I~~dG~~~~~ed-----Lgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...|.++|..|-+.+. . .|+.+-+..++..     ||..+.+-.+--+...+....-|.|+-+||+..|...
T Consensus        21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~   94 (113)
T 2lnk_A           21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   94 (113)
T ss_dssp             HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence            4678899999952333 3 8999999999976     7777766556666667788888999999999988753

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=92.54  E-value=0.45  Score=36.01  Aligned_cols=65  Identities=6%  Similarity=0.123  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCC--CCCCHHHHHHH-------HhhCccccccccHHHHHhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV--DPQDIVMLVVS-------WHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv--~~ed~~~L~la-------~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ...+.++|+.|-......|+.+-+..++..+|.  .|.+..+-.+.       ..+....-|.|+.+||+..|.
T Consensus        35 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~  108 (208)
T 2hpk_A           35 LSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANR  108 (208)
T ss_dssp             -CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            467889999984434469999999999999988  77655555554       667777889999999999986

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=92.53  E-value=0.38  Score=32.19  Aligned_cols=67  Identities=13%  Similarity=0.125  Sum_probs=50.5

Q ss_pred             HHHHHHHHHHhcCC-CCC-ccCHHHHHHHHh-HcC----CCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDP-YLD-MILVDGITLLCN-DLQ----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~-~~d-~I~~dG~~~~~e-dLg----v~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+.++|..|-+. .+. .|+.+-+..++. .+|    ..+....+-.+...+....-|.|+.+||+..|..+
T Consensus        12 ~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~~   85 (99)
T 1qls_A           12 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL   85 (99)
T ss_dssp             HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            45788999999523 335 899999999998 454    55555555555566777788999999999988765

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=92.53  E-value=0.4  Score=34.02  Aligned_cols=67  Identities=6%  Similarity=0.009  Sum_probs=52.5

Q ss_pred             CCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .....+.++|+.|-....+.|+.+-+..++..+|++.+++.-++  ..+....-|.|+.+||+..|...
T Consensus        19 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~gl~~~el~~i~--~~~D~d~dG~I~~~EF~~~m~~~   85 (110)
T 1iq3_A           19 EQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIW--ELSDADCDGALTLPEFCAAFHLI   85 (110)
T ss_dssp             SSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHH--HHHCSSSCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCHHHHHHHH--HHHcCCCCCcCcHHHHHHHHHHH
Confidence            35788999999994333469999999999999998777655532  34566778999999999998764

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=92.52  E-value=0.41  Score=35.23  Aligned_cols=62  Identities=6%  Similarity=-0.061  Sum_probs=49.0

Q ss_pred             HHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        61 ~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..|...
T Consensus       113 ~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~~  174 (191)
T 1uhk_A          113 ALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGF  174 (191)
T ss_dssp             HHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            78888843334689999999999999987766666666666777778999999999988864

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=92.52  E-value=0.44  Score=35.27  Aligned_cols=100  Identities=12%  Similarity=0.029  Sum_probs=67.8

Q ss_pred             CHHHHHHHHHHhcCC-CCCccCHHHHHHHHhHcCCCC-CCHHHHHHHHhhCccccccccHHHHHhhhhhcCCC-cHHHHH
Q 030467           55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID-SLDKFR  131 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~-~~d~I~~dG~~~~~edLgv~~-ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~d-sl~~lk  131 (177)
                      ....+.++|..+-.. ....|+.+-+..++..+|..+ .+..+-.+-..+....-|.|+.+||+..+..++.. +.+.++
T Consensus        23 ~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~  102 (190)
T 2l2e_A           23 DKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLI  102 (190)
T ss_dssp             CSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHH
Confidence            356788889888543 346899999999999997653 22333344556677888999999999999987643 455566


Q ss_pred             HHHHHHHHHc---cChhHHHHHHHHH
Q 030467          132 ERISFMRAEL---KDEQKFREIYNFA  154 (177)
Q Consensus       132 ~~l~~l~~~l---~~~~~Fk~iY~ft  154 (177)
                      ..+..+...=   -+..+|+.+..-.
T Consensus       103 ~~f~~~D~d~~G~i~~~e~~~~~~~~  128 (190)
T 2l2e_A          103 WAFQLYDLDNNGLISYDEMLRIVDAI  128 (190)
T ss_dssp             HHHHHHCTTSCSCBCHHHHHHHHHHH
T ss_pred             HHHhHccCCCCCcCcHHHHHHHHHHH
Confidence            6555543322   1334566665543

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=92.49  E-value=0.24  Score=36.63  Aligned_cols=83  Identities=7%  Similarity=0.018  Sum_probs=58.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHc-----------CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL-----------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL-----------gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ....+.++|..|-...+..|+.+-+...+..+           |..+.+..+-.+...+....-|.|+.+||+..+....
T Consensus        38 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~  117 (191)
T 3khe_A           38 ETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQ  117 (191)
T ss_dssp             TTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHH
T ss_pred             HHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhc
Confidence            45789999999843334689999999999887           6666555566666677777889999999999875532


Q ss_pred             -CCcHHHHHHHHHHH
Q 030467          124 -IDSLDKFRERISFM  137 (177)
Q Consensus       124 -~dsl~~lk~~l~~l  137 (177)
                       -.+.+.++.....+
T Consensus       118 ~~~~~~~~~~~F~~~  132 (191)
T 3khe_A          118 LLLSRERLLAAFQQF  132 (191)
T ss_dssp             HHCCHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHH
Confidence             22344454444444

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=92.47  E-value=0.94  Score=32.90  Aligned_cols=64  Identities=5%  Similarity=0.036  Sum_probs=42.1

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+  ..-|.|+.+||+.-+..+
T Consensus        72 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~  135 (167)
T 1gjy_A           72 NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL  135 (167)
T ss_dssp             HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH
Confidence            5667777777433345788888888888888766443333333333  556788888888877664

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=92.45  E-value=0.43  Score=36.00  Aligned_cols=67  Identities=9%  Similarity=0.132  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      -..|.++|+.|=......|+.+=+...+..||++|.+..+--+...+....-|.++-++|+..+...
T Consensus        10 i~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~   76 (176)
T 2lhi_A           10 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQ   76 (176)
T ss_dssp             GGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSS
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHh
Confidence            4678889999833334699999999999999999988887777777777778888888888776554

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=92.44  E-value=0.81  Score=40.71  Aligned_cols=82  Identities=13%  Similarity=0.153  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC--CCcHHHHHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG--IDSLDKFRER  133 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~--~dsl~~lk~~  133 (177)
                      ...+.++|..+-......|+.+-+..++..+|..+..-.+-.+...+....-|.|+.+||+..|..+.  .+..+.++..
T Consensus       311 i~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~a  390 (450)
T 3sg6_A          311 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREA  390 (450)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------CHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccchhhHHHHH
Confidence            46788999999433346999999999999999999877777777778888889999999999998653  2334444444


Q ss_pred             HHHH
Q 030467          134 ISFM  137 (177)
Q Consensus       134 l~~l  137 (177)
                      ...+
T Consensus       391 Fk~f  394 (450)
T 3sg6_A          391 FRVF  394 (450)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            4443

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=92.43  E-value=1.2  Score=31.75  Aligned_cols=78  Identities=14%  Similarity=0.223  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc--CCCcHHHHHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL--GIDSLDKFRER  133 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l--~~dsl~~lk~~  133 (177)
                      ...+.++|..|-......|+.+-+..++..+|+.+....+-.+.   . ..-|.|+.+||+..|...  ..++...++..
T Consensus        17 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~-~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~   92 (156)
T 1wdc_B           17 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML---K-EAPGPLNFTMFLSIFSDKLSGTDSEETIRNA   92 (156)
T ss_dssp             HHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHH---T-TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHH---H-hCCCcCcHHHHHHHHHHHhcCCChHHHHHHH
Confidence            46788899998443446999999999999999998754443333   2 346899999999998764  23344555554


Q ss_pred             HHHH
Q 030467          134 ISFM  137 (177)
Q Consensus       134 l~~l  137 (177)
                      ...+
T Consensus        93 F~~~   96 (156)
T 1wdc_B           93 FAMF   96 (156)
T ss_dssp             HHTT
T ss_pred             HHHH
Confidence            4433

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=92.36  E-value=0.38  Score=35.58  Aligned_cols=62  Identities=8%  Similarity=0.053  Sum_probs=47.6

Q ss_pred             HHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        61 ~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..|..+
T Consensus       117 ~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  178 (195)
T 1qv0_A          117 AVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLGF  178 (195)
T ss_dssp             HHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence            78888843334689999999999999988766666666667777778999999999988775

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=92.30  E-value=0.87  Score=34.49  Aligned_cols=71  Identities=15%  Similarity=0.127  Sum_probs=54.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHc-CCCCCCHHHHHH----HHhhCccccccccHHHHHhhhhhcCCC
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL-QVDPQDIVMLVV----SWHMKAATMCEFSKQEFIGGLQSLGID  125 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL-gv~~ed~~~L~l----a~~l~a~~~g~~tr~eF~~g~~~l~~d  125 (177)
                      ....+..+|..|-....+.|+.+-+.+++..+ |..+.+-.+-.+    ...+....-|.|+.+||+..+...++.
T Consensus       111 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~  186 (208)
T 2ct9_A          111 RSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVE  186 (208)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTTSCGG
T ss_pred             HHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccChH
Confidence            35678889999843344699999999999986 977655444333    455667778999999999999987654

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=92.04  E-value=0.91  Score=35.93  Aligned_cols=107  Identities=12%  Similarity=0.043  Sum_probs=65.8

Q ss_pred             HHHHHHHhhCCCHHHHHHHHHhC-----CCCcc-----ccchhhccccCCCCcCCHHHHHHHHHHhcCCCCCccCHHHHH
Q 030467           11 KLQQFVSITGASEKAALQALKAS-----DWHLE-----GAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGIT   80 (177)
Q Consensus        11 ~i~~F~~~T~~s~~~A~~~L~~~-----~w~le-----~A~~~ff~~~~~~~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~   80 (177)
                      .+.++...|+.++.....+.+..     +..+.     .++...+     ........+..+|..+-....+.|+.+-..
T Consensus        78 ~l~~l~~~~~~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~-----~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~  152 (256)
T 2jul_A           78 GLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFF-----PQGDATTYAHFLFNAFDADGNGAIHFEDFV  152 (256)
T ss_dssp             HHHHHHHHTTSCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHC-----CSSCCHHHHHHHHHHSSCSCCSEECSHHHH
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHc-----ccCCcHHHHHHHHHHhccCCCCcCcHHHHH
Confidence            56777788888877666655442     11121     1111111     012345678888888744334688888888


Q ss_pred             HHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           81 LLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        81 ~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .++..++..+..-.+-.+-..+....-|.|+++||...+..+
T Consensus       153 ~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~  194 (256)
T 2jul_A          153 VGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSI  194 (256)
T ss_dssp             HHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            888887765543333333345566778889999998888775

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=92.04  E-value=0.46  Score=35.85  Aligned_cols=50  Identities=10%  Similarity=0.021  Sum_probs=20.7

Q ss_pred             ccCHHHHHHHHhHcCCC-CCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           73 MILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        73 ~I~~dG~~~~~edLgv~-~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .|+.+-+..++..++.. +....+-.+-..+....-|.|+.+||+..+..+
T Consensus        50 ~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~  100 (207)
T 2d8n_A           50 RITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMT  100 (207)
T ss_dssp             EEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHH
Confidence            44444444444444443 222222222333333444444444444444443

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=92.02  E-value=0.72  Score=32.83  Aligned_cols=63  Identities=6%  Similarity=-0.040  Sum_probs=47.6

Q ss_pred             HHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        58 ~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .+..+|..|-......|+.+-+.+++..+|+++++  +-.+...+....-|.|+.+||+..+..+
T Consensus        99 ~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~~~~~~--~~~~~~~~D~d~dg~i~~~ef~~~~~~~  161 (166)
T 3akb_A           99 FLHAALGVADTDGDGAVTVADTARALTAFGVPEDL--ARQAAAALDTDGDGKVGETEIVPAFARY  161 (166)
T ss_dssp             HHHHHHHHHCSSSSSCCBHHHHHHHHHHTTCCHHH--HHHHHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCHHH--HHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            38889988843334699999999999999944433  3344445677788999999999988764

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=92.01  E-value=2  Score=33.27  Aligned_cols=111  Identities=9%  Similarity=0.008  Sum_probs=60.9

Q ss_pred             HHHHHHHHhhCCCHHHHHHHHHhC-----CCCccccchhhcccc-C-CCCcCCHHHHHHHHHHhcCCCCCccCHHHHHHH
Q 030467           10 DKLQQFVSITGASEKAALQALKAS-----DWHLEGAFDVFYSQP-Q-SKSLTDTRHLEELYNRYKDPYLDMILVDGITLL   82 (177)
Q Consensus        10 ~~i~~F~~~T~~s~~~A~~~L~~~-----~w~le~A~~~ff~~~-~-~~~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~   82 (177)
                      +.+.+++..|+.++..-..+.+..     +..++  .+.|-..- . .........+..+|..+-...++.|+.+-...+
T Consensus        37 ~~l~~l~~~~~~s~~ei~~l~~~Fd~~d~~G~I~--~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~  114 (224)
T 1s1e_A           37 EGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVN--EETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTA  114 (224)
T ss_dssp             -CHHHHHHHSSCCHHHHHHHHHHHHHHCTTSCBC--HHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCC--HHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHH
Confidence            346677777777766655554432     11111  11111100 0 011234667777888774333457888877777


Q ss_pred             HhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           83 CNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        83 ~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      +..++..+..-.+-.+-..+....-|.|+++||...+..+
T Consensus       115 l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~  154 (224)
T 1s1e_A          115 LSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI  154 (224)
T ss_dssp             HHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHH
T ss_pred             HHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHH
Confidence            7776644433233333334556667888888888887765

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A

Probab=92.00  E-value=0.32  Score=35.86  Aligned_cols=64  Identities=11%  Similarity=0.182  Sum_probs=50.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHh-hCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWH-MKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~-l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....+.++|+++ |+....|+.+-+..++...|++.+   .|.=.|. .....-|.++++||+.+|.-+
T Consensus        31 e~~~y~~iF~~l-D~~dG~Isg~elr~~~~~sgLp~~---~L~~Iw~laD~d~dG~Ld~~EF~~aM~Li   95 (121)
T 3fia_A           31 ERAKHDQQFHSL-KPISGFITGDQARNFFFQSGLPQP---VLAQIWALADMNNDGRMDQVEFSIAMKLI   95 (121)
T ss_dssp             HHHHHHHHHHHT-CCBTTBEEHHHHHHHHGGGCCCHH---HHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh-CCCCCeECHHHHHHHHHHcCCCHH---HHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence            468899999999 445579999999999999999754   3444454 346778999999999998765

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=91.98  E-value=0.59  Score=33.75  Aligned_cols=64  Identities=13%  Similarity=-0.008  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...+..+|..|-......|+.+-+.+++..+|++++.+..+  ...+....-|.|+.+||+..|..
T Consensus        93 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~--~~~~D~d~dg~i~~~ef~~~~~~  156 (174)
T 1q80_A           93 EGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPAS--FDAIDTNNDGLLSLEEFVIAGSD  156 (174)
T ss_dssp             HTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTCCGGGHHHH--HHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCCCHHHHHHH--HHHhCCCCCceEeHHHHHHHHHH
Confidence            36788899998443446999999999999999877654433  34456677899999999998865

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=91.94  E-value=1.8  Score=32.39  Aligned_cols=69  Identities=10%  Similarity=0.003  Sum_probs=55.5

Q ss_pred             CCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .....+..+|..+-....+.|+.+-...++..++..+..-.+-.+-..+....-|.|+++||...+..+
T Consensus        56 ~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~  124 (204)
T 1jba_A           56 EATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESI  124 (204)
T ss_dssp             TTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            456788999999854444699999999999999887765555555566778889999999999998876

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=91.92  E-value=0.57  Score=33.45  Aligned_cols=65  Identities=8%  Similarity=0.078  Sum_probs=41.6

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+... -|.|+.+||+.-|..
T Consensus        86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~  150 (156)
T 1wdc_B           86 EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG  150 (156)
T ss_dssp             HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred             HHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhc
Confidence            45677777776332335777777777777777665544444444555555 677777777776665

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=91.73  E-value=0.6  Score=34.52  Aligned_cols=67  Identities=12%  Similarity=0.078  Sum_probs=29.9

Q ss_pred             HHHHHHHHHhcCC-CCCccCHHHHHHHHhHcCCCCCC-HHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           57 RHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        57 ~~l~~lF~~Y~d~-~~d~I~~dG~~~~~edLgv~~ed-~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ..+.++|+.|-.. ....|+.+-+..++..+|..+.. ..+-.+-..+....-|.|+.+||+..+..++
T Consensus        25 ~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~   93 (193)
T 1bjf_A           25 HEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTS   93 (193)
T ss_dssp             HHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHc
Confidence            3444444444321 12355555555555555544321 1122222333444455555555555555544

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=91.70  E-value=0.84  Score=35.52  Aligned_cols=101  Identities=11%  Similarity=0.130  Sum_probs=67.0

Q ss_pred             CCHHHHHHHHHHhcCC-CCCccCHHHHHHHHhHcCCC-CCCHHHHHHHHhhCccccccccHHHHHhhhhhcCC-CcHHHH
Q 030467           54 TDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI-DSLDKF  130 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~-~~d~I~~dG~~~~~edLgv~-~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~-dsl~~l  130 (177)
                      .....+.++|+.|... ....|+.+-+..++..+|.. +....+-.+-..+....-|.|+.+||+..+..++. .+.+.+
T Consensus        48 ~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l  127 (224)
T 1s1e_A           48 FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKL  127 (224)
T ss_dssp             CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHHHHH
T ss_pred             CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHHHHH
Confidence            3567777777777542 34689999999999999865 44444555666777888899999999999988653 234445


Q ss_pred             HHHHHHHHHHc---cChhHHHHHHHHH
Q 030467          131 RERISFMRAEL---KDEQKFREIYNFA  154 (177)
Q Consensus       131 k~~l~~l~~~l---~~~~~Fk~iY~ft  154 (177)
                      +.....+...=   -+..+|+.++.-.
T Consensus       128 ~~~F~~~D~d~dG~Is~~E~~~~l~~~  154 (224)
T 1s1e_A          128 RWTFNLYDINKDGYINKEEMMDIVKAI  154 (224)
T ss_dssp             HHHHHHHCTTCCSEECHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCeECHHHHHHHHHHH
Confidence            54444433221   1334466665544

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=91.64  E-value=0.95  Score=34.20  Aligned_cols=63  Identities=8%  Similarity=0.107  Sum_probs=50.1

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHc----CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL----gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ..+.++|..|- .....|+.+-+...+..+    |..+.+-.+=.+...+. ..-|.|+.+||+.-|..
T Consensus        76 ~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~  142 (174)
T 2i7a_A           76 VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMR  142 (174)
T ss_dssp             HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH
Confidence            57888999995 444699999999999999    98886655555555556 67889999999998765

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=91.61  E-value=0.43  Score=34.71  Aligned_cols=68  Identities=7%  Similarity=-0.014  Sum_probs=52.3

Q ss_pred             CHHHHHHHHHHhcCC-CCCccCHHHHHHHHhHcC----CCCCCHHHHHH-----------HHhhCccccccccHHHHHhh
Q 030467           55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQ----VDPQDIVMLVV-----------SWHMKAATMCEFSKQEFIGG  118 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~-~~d~I~~dG~~~~~edLg----v~~ed~~~L~l-----------a~~l~a~~~g~~tr~eF~~g  118 (177)
                      ..+.+.++|..|.|. ....|+.+-+..++..++    ..+....+-.|           ...+....-|.|+.+||+..
T Consensus         6 ~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~   85 (185)
T 2sas_A            6 QKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAM   85 (185)
T ss_dssp             HHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred             HHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHH
Confidence            357899999999333 346999999999999888    77765444333           45666777899999999999


Q ss_pred             hhhc
Q 030467          119 LQSL  122 (177)
Q Consensus       119 ~~~l  122 (177)
                      |...
T Consensus        86 ~~~~   89 (185)
T 2sas_A           86 WEKT   89 (185)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8875

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=91.58  E-value=0.86  Score=32.97  Aligned_cols=64  Identities=3%  Similarity=-0.053  Sum_probs=43.1

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+  ..-|.|+.+||+..+..+
T Consensus        70 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~  133 (165)
T 1k94_A           70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL  133 (165)
T ss_dssp             HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence            5677778877433345888888888888888766443333333333  566788888888887664

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=91.49  E-value=2.6  Score=31.55  Aligned_cols=112  Identities=8%  Similarity=-0.015  Sum_probs=74.4

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhC-----CCCccccchhhcccc--CCCCcCCHHHHHHHHHHhcCCCCCccCHHHHHH
Q 030467            9 RDKLQQFVSITGASEKAALQALKAS-----DWHLEGAFDVFYSQP--QSKSLTDTRHLEELYNRYKDPYLDMILVDGITL   81 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~-----~w~le~A~~~ff~~~--~~~~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~   81 (177)
                      .+.+..++..++.++.....+.+..     +..+  -.+.|...-  -.........+..+|..+-......|+.+-...
T Consensus        18 ~~el~~~~~~~~~~~~~i~~~f~~~d~~~~~G~i--~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~   95 (207)
T 2d8n_A           18 KEILEELQLNTKFSEEELCSWYQSFLKDCPTGRI--TQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVI   95 (207)
T ss_dssp             HHHHHHHHHHSSCCHHHHHHHHHHHHHHCTTSEE--EHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCC--CHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHH
Confidence            3557788888888887777666542     2222  122222110  011123567899999999544456899999999


Q ss_pred             HHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           82 LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        82 ~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ++..++..+..-.+-.+-..+....-|.|+++||+..+..+
T Consensus        96 ~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~  136 (207)
T 2d8n_A           96 ALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAI  136 (207)
T ss_dssp             HHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHH
Confidence            99998865544334444456677888999999999999875

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=91.39  E-value=2.9  Score=30.61  Aligned_cols=113  Identities=12%  Similarity=0.031  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhC-----CCCccccchhhccccC--CCCcCCHHHHHHHHHHhcCCCCCccCHHHHH
Q 030467            8 NRDKLQQFVSITGASEKAALQALKAS-----DWHLEGAFDVFYSQPQ--SKSLTDTRHLEELYNRYKDPYLDMILVDGIT   80 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~-----~w~le~A~~~ff~~~~--~~~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~   80 (177)
                      +++.++.....|+.++..-..+.+..     +..+.  .+.|-..-.  .........+..+|..+-....+.|+.+-..
T Consensus         9 ~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~--~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~   86 (193)
T 1bjf_A            9 RPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLS--MEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFI   86 (193)
T ss_dssp             CHHHHHHHHHHSSCCHHHHHHHHHHHHHHSTTSEEE--HHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHH
T ss_pred             CHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCCcC--HHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            34567778888999877665554432     22221  122211100  1112235678999999954444699999999


Q ss_pred             HHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           81 LLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        81 ~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .++..++..+..-.+-.+-..+....-|.|+++||...+..+
T Consensus        87 ~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~  128 (193)
T 1bjf_A           87 IALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAI  128 (193)
T ss_dssp             HHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHH
Confidence            999998876654444444456778889999999999998774

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=91.35  E-value=0.79  Score=32.30  Aligned_cols=75  Identities=9%  Similarity=0.102  Sum_probs=49.7

Q ss_pred             HHHHHHHHHhcCCC-CCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC--CCcHHHHHHH
Q 030467           57 RHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG--IDSLDKFRER  133 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~-~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~--~dsl~~lk~~  133 (177)
                      ..+.++|..|-... .+.|+.+-+...+..+|+.|.+..+-.+...+...    |+.+||+..+...-  -++...++..
T Consensus        14 ~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~l~~~   89 (146)
T 2qac_A           14 VDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEELIKM   89 (146)
T ss_dssp             SCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHHHHHH
T ss_pred             HHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHHHHHH
Confidence            45677888875434 45888999999999999888766665555555544    88888888776531  2334444444


Q ss_pred             HH
Q 030467          134 IS  135 (177)
Q Consensus       134 l~  135 (177)
                      ..
T Consensus        90 F~   91 (146)
T 2qac_A           90 FA   91 (146)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A

Probab=91.27  E-value=0.12  Score=37.68  Aligned_cols=41  Identities=20%  Similarity=0.370  Sum_probs=34.4

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccccC
Q 030467            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~   49 (177)
                      .+.|++.+++=-.++..+++.|..++||++.||+..|+.+.
T Consensus        67 ~~qL~qL~eMGF~d~~~ni~AL~~t~Gdve~AVe~L~~~~~  107 (108)
T 2cwb_A           67 QPQLQQLRDMGIQDDELSLRALQATGGDIQAALELIFAGGA  107 (108)
T ss_dssp             HHHHHHHHTTTCCCHHHHHHHHHHHTSCHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHcCCCCHHHHHHHHHHhCCCHHHHHHHHHhcCC
Confidence            56788888854457889999999999999999999987653

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=91.18  E-value=1.6  Score=32.48  Aligned_cols=68  Identities=6%  Similarity=-0.036  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ...+..+|..+-...+..|+.+-...++..++..+..-.+-.+-..+....-|.|+++||...+..++
T Consensus        51 ~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~  118 (198)
T 2r2i_A           51 NKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIR  118 (198)
T ss_dssp             HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence            34588899998543446899999999999888776444444444566777889999999999998874

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=91.04  E-value=0.79  Score=32.29  Aligned_cols=62  Identities=5%  Similarity=0.055  Sum_probs=30.1

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~  119 (177)
                      ...+..+|..|-....+.|+.+-+.+++..+|..+.+-.+-.+...+  ..-|.|+.+||+.-|
T Consensus        83 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l  144 (146)
T 2qac_A           83 VEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDI  144 (146)
T ss_dssp             HHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHH
Confidence            45555666655222224566666666666666444322222222222  444566666665544

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=90.98  E-value=1.9  Score=31.16  Aligned_cols=75  Identities=8%  Similarity=-0.003  Sum_probs=37.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHH-HhhCccccccccHHHHHhhhhhcCCC-cHHHHHH
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVS-WHMKAATMCEFSKQEFIGGLQSLGID-SLDKFRE  132 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la-~~l~a~~~g~~tr~eF~~g~~~l~~d-sl~~lk~  132 (177)
                      ....+..+|..+-...++.|+.+-...++..+       ..+.-+ ..+-...-|.|+++||...+..+|.. +.+.++.
T Consensus        40 ~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~  112 (167)
T 1gjy_A           40 NLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-------NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNS  112 (167)
T ss_dssp             CHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH-------HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHH
T ss_pred             CHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHH
Confidence            44556666666533223456666666655543       112222 23344556667777777666666643 3334444


Q ss_pred             HHHH
Q 030467          133 RISF  136 (177)
Q Consensus       133 ~l~~  136 (177)
                      .+..
T Consensus       113 ~~~~  116 (167)
T 1gjy_A          113 IAKR  116 (167)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            3333

>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1

Probab=90.93  E-value=0.074  Score=35.01  Aligned_cols=39  Identities=21%  Similarity=0.307  Sum_probs=34.2

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhC-CCCccccchhhcccc
Q 030467            9 RDKLQQFVSITGASEKAALQALKAS-DWHLEGAFDVFYSQP   48 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~-~w~le~A~~~ff~~~   48 (177)
                      .+.|.+++++ |-++..|++.|+.+ +||++.|++-.|+.+
T Consensus        10 ~~~v~~L~~M-GF~~~~a~~AL~~t~~~nve~A~ewLl~~~   49 (64)
T 1whc_A           10 LTALESLIEM-GFPRGRAEKALALTGNQGIEAAMDWLMEHE   49 (64)
T ss_dssp             CCHHHHHHTT-TCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHhcCCCHHHHHHHHHhCC
Confidence            3578999984 99999999999999 799999999888765

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=90.90  E-value=0.79  Score=32.22  Aligned_cols=67  Identities=10%  Similarity=0.104  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHhcCCC--CCccCHHHHHHHHhH-----cCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPY--LDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~--~d~I~~dG~~~~~ed-----Lgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...|.+.|..|-+.+  .+.|+.+-+..++..     ||-.+++-.+=-+-..+....=|.|+-+||+.-+..+
T Consensus         9 i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~   82 (101)
T 3nso_A            9 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL   82 (101)
T ss_dssp             HHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            367888999995332  369999999999985     4666666555566666777788999999999877664

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=90.73  E-value=0.34  Score=33.29  Aligned_cols=66  Identities=8%  Similarity=0.152  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhH-----cCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~ed-----Lgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...|.++|..|-+.+ +.|+.+-+..++..     ||..+.+-.+--+...+....-|.|+-+||+..|..+
T Consensus         8 ~~~l~~~F~~fD~~d-g~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~   78 (96)
T 1a4p_A            8 METMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL   78 (96)
T ss_dssp             HHHHHHHHHHHHGGG-CSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCC-CeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            357888999995222 39999999999875     6666655555555566777888999999999998764

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=90.72  E-value=0.36  Score=34.19  Aligned_cols=64  Identities=6%  Similarity=-0.022  Sum_probs=47.6

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.+||+.-|.
T Consensus        86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~  149 (151)
T 1w7j_B           86 YEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHIL  149 (151)
T ss_dssp             --CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHh
Confidence            345677888883333468999999999999998776665555666667 7788999999998765

>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.67  E-value=0.15  Score=34.52  Aligned_cols=40  Identities=20%  Similarity=0.191  Sum_probs=34.5

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhCC-CCccccchhhcccc
Q 030467            8 NRDKLQQFVSITGASEKAALQALKASD-WHLEGAFDVFYSQP   48 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~-w~le~A~~~ff~~~   48 (177)
                      ..+.|++.+++ |-++..|++.|..++ ||++.|++-.|++.
T Consensus         9 ~e~~v~~L~~M-GF~~~~a~~AL~~t~n~~ve~A~ewL~~~~   49 (74)
T 2dag_A            9 DESVIIQLVEM-GFPMDACRKAVYYTGNSGAEAAMNWVMSHM   49 (74)
T ss_dssp             CHHHHHHHHHH-SCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence            35779999994 999999999999988 58999999888754

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=90.66  E-value=0.56  Score=35.32  Aligned_cols=65  Identities=9%  Similarity=-0.112  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCC-----CCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVD-----PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~-----~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      .+.|.+ |..+-......|+.+-+.+.+..||++     +..-.+-.+...+....-|.|+.+||+..|..
T Consensus        32 ~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~  101 (198)
T 1juo_A           32 QDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV  101 (198)
T ss_dssp             CCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             cHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHH
Confidence            456777 777633334689999999999999983     45455555566667777788888888877654

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=90.54  E-value=0.76  Score=33.83  Aligned_cols=67  Identities=10%  Similarity=0.107  Sum_probs=30.9

Q ss_pred             HHHHHHHHHHhcCC-CCCccCHHHHHHHHhHcC-CCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDP-YLDMILVDGITLLCNDLQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~-~~d~I~~dG~~~~~edLg-v~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+.++|+.|... ....|+.+-+..++..++ .......+-.+-..+....-|.|+.+||+..+..+
T Consensus        24 ~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~   92 (190)
T 1g8i_A           24 EKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVT   92 (190)
T ss_dssp             HHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHh
Confidence            34445555544321 123556666655555551 11111222233334444555566666666665554

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=90.48  E-value=0.95  Score=30.44  Aligned_cols=65  Identities=12%  Similarity=0.092  Sum_probs=47.6

Q ss_pred             HHHHHHHHHHhcCC-CCC-ccCHHHHHHHHhH---cC-CCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDP-YLD-MILVDGITLLCND---LQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~-~~d-~I~~dG~~~~~ed---Lg-v~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...|.++|..|-+. .+. .|+.+-+..++..   +| ++++.+.  .+...+....-|.|+-+||+..+..+
T Consensus         9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~--~~~~~~D~d~dG~I~f~EF~~~~~~~   79 (92)
T 2kax_A            9 LTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSID--DLMKSLDKNSDQEIDFKEYSVFLTML   79 (92)
T ss_dssp             HHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHH--HHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHH--HHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            35788899999733 345 8999999999986   44 3444433  34455677778999999999988764

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=90.43  E-value=2.8  Score=30.84  Aligned_cols=80  Identities=5%  Similarity=-0.038  Sum_probs=39.7

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCCCcHHHHHHHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERIS  135 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~dsl~~lk~~l~  135 (177)
                      +..+..+|..+-....+.|+.+-...++..+.-.++ -.+-.+-..+-...-|.||++||...+...++ +-+.+...+.
T Consensus        72 ~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~-~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~-~~~~~~~~~~  149 (180)
T 3mse_B           72 KWDINRILQALDINDRGNITYTEFMAGCYRWKNIES-TFLKAAFNKIDKDEDGYISKSDIVSLVHDKVL-DNNDIDNFFL  149 (180)
T ss_dssp             HHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC---CHHHHHHHHHCTTCSSCBCHHHHHHHTTTSSC-CHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCH-HHHHHHHHHHCCCCCCCCCHHHHHHHHcCCCC-CHHHHHHHHH
Confidence            355666676663323346776666666654432221 11222222344555677777777777664333 3333444444


Q ss_pred             HH
Q 030467          136 FM  137 (177)
Q Consensus       136 ~l  137 (177)
                      .+
T Consensus       150 ~~  151 (180)
T 3mse_B          150 SV  151 (180)
T ss_dssp             HH
T ss_pred             Hh
Confidence            43

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=90.43  E-value=1.3  Score=32.53  Aligned_cols=113  Identities=11%  Similarity=-0.013  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhC-----CCCccccchhhccccC--CCCcCCHHHHHHHHHHhcCCCCCccCHHHHH
Q 030467            8 NRDKLQQFVSITGASEKAALQALKAS-----DWHLEGAFDVFYSQPQ--SKSLTDTRHLEELYNRYKDPYLDMILVDGIT   80 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~-----~w~le~A~~~ff~~~~--~~~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~   80 (177)
                      +++.++++...|+.++..-..+.+..     +..+.  .+.|-..-.  .........+..+|..+-....+.|+.+-..
T Consensus         9 ~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~--~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~   86 (190)
T 1g8i_A            9 KPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLD--AAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFI   86 (190)
T ss_dssp             CHHHHHHHHHTSSSCHHHHHHHHHHHHHHCTTSEEE--HHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHH
T ss_pred             CHHHHHHHHHccCCCHHHHHHHHHHHHHhCCCCcCC--HHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHH
Confidence            45668888888998877666555542     22221  112211000  0011245678999999954445689999999


Q ss_pred             HHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           81 LLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        81 ~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .++..++..+..-.+-.+-..+....-|.|+++||...+..+
T Consensus        87 ~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~  128 (190)
T 1g8i_A           87 QALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAI  128 (190)
T ss_dssp             HHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHH
Confidence            999888776544444444456677888999999999998873

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=90.39  E-value=1.5  Score=33.93  Aligned_cols=87  Identities=10%  Similarity=0.043  Sum_probs=59.8

Q ss_pred             CcCCHHHHHHHHHHhcCCCCCccCHHHHHHHHh----HcCC--CCCCHHHHHHH----HhhCccccccccHHHHHhh---
Q 030467           52 SLTDTRHLEELYNRYKDPYLDMILVDGITLLCN----DLQV--DPQDIVMLVVS----WHMKAATMCEFSKQEFIGG---  118 (177)
Q Consensus        52 ~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~e----dLgv--~~ed~~~L~la----~~l~a~~~g~~tr~eF~~g---  118 (177)
                      +......|.++|+.|-......|+.+-+...+.    .||+  .|.+-.+--+.    ..+....-|.|+.+||+..   
T Consensus         6 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~   85 (272)
T 2be4_A            6 ANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILP   85 (272)
T ss_dssp             CCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHSC
T ss_pred             HhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHhh
Confidence            344678999999999543446999999999998    9999  77544433222    3455667899999999999   


Q ss_pred             --------hhhcC-CCcHHHHHHHHHHHH
Q 030467          119 --------LQSLG-IDSLDKFRERISFMR  138 (177)
Q Consensus       119 --------~~~l~-~dsl~~lk~~l~~l~  138 (177)
                              +..++ ..+...++.....+.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~l~~~F~~~D  114 (272)
T 2be4_A           86 QEENFLLIFRREAPLDNSVEFMKIWRKYD  114 (272)
T ss_dssp             HHHHHHHHHHHHSCCCCHHHHHHHHHHHC
T ss_pred             hhHHHHHHHhhccCcccHHHHHHHHHHhC
Confidence                    33332 345555555555443

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=90.27  E-value=1.1  Score=32.99  Aligned_cols=66  Identities=9%  Similarity=0.023  Sum_probs=34.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ....+..+|..+-....+.|+.+-...++.........-.+-.+-..+-...-|.||++||...+.
T Consensus        85 ~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~  150 (191)
T 3khe_A           85 IEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG  150 (191)
T ss_dssp             HHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred             hHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc
Confidence            345666666666332334666666666654332222222222233344455566777777776666

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=90.22  E-value=0.25  Score=37.85  Aligned_cols=83  Identities=10%  Similarity=0.017  Sum_probs=48.1

Q ss_pred             CHHHHHHHHHHhcCC-CCCccCHHHHHHHHhHcCCCCCCHH-HHHHHHhhCccccccccHHHHHhhhhhcCCCc-HHHHH
Q 030467           55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIV-MLVVSWHMKAATMCEFSKQEFIGGLQSLGIDS-LDKFR  131 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~-~~d~I~~dG~~~~~edLgv~~ed~~-~L~la~~l~a~~~g~~tr~eF~~g~~~l~~ds-l~~lk  131 (177)
                      ....|.++|+.|-.. ....|+.+-+..++..+|.+|.+.. +--+-..+....-|.|+.+||+..|..++... .+.++
T Consensus        17 s~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~   96 (211)
T 2ggz_A           17 PTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLK   96 (211)
T ss_dssp             -------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHH
Confidence            345667777766432 2357888888888888888764433 33444456667778888888888887765433 33344


Q ss_pred             HHHHHH
Q 030467          132 ERISFM  137 (177)
Q Consensus       132 ~~l~~l  137 (177)
                      .....+
T Consensus        97 ~~F~~~  102 (211)
T 2ggz_A           97 WYFKLY  102 (211)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            444433

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=90.19  E-value=0.97  Score=32.75  Aligned_cols=65  Identities=9%  Similarity=0.140  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+..+|..|-......|+.+-+.+++..+|++++++..+.  ..+....-|.|+.+||+..+...
T Consensus       104 ~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~--~~~D~d~dG~i~~~ef~~~~~~~  168 (185)
T 2sas_A          104 QNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVY--NVITDGGKVTFDLNRYKELYYRL  168 (185)
T ss_dssp             HHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHH--HHHHTTTTSCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHH--HHhcCCCCCcCcHHHHHHHHHHH
Confidence            467888999984434468999999999999998776655433  34456677899999999988763

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=89.94  E-value=4.4  Score=29.56  Aligned_cols=118  Identities=11%  Similarity=0.062  Sum_probs=72.9

Q ss_pred             CCCccHHHHHH-HHHHh----hCC-CHHHHHHHHHhCCCCccccc-hhhccccC---------------CCCcCCHHHHH
Q 030467            3 KLSRSNRDKLQ-QFVSI----TGA-SEKAALQALKASDWHLEGAF-DVFYSQPQ---------------SKSLTDTRHLE   60 (177)
Q Consensus         3 ~l~~~q~~~i~-~F~~~----T~~-s~~~A~~~L~~~~w~le~A~-~~ff~~~~---------------~~~~~~~~~l~   60 (177)
                      +||..|.+.++ .|..+    .|. +...-...|+.-+.++..+. ..+.....               .........|.
T Consensus         9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~   88 (153)
T 3i5g_B            9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLTLFGEKVSGTDPEDALR   88 (153)
T ss_dssp             TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHHTSSSCCCSHHHHHTTTTTTTTCCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHHhccCCccHHHHHHHHHhhhcccccHHHHH
Confidence            57777766664 34443    333 45556666666665543221 22221111               11223467899


Q ss_pred             HHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        61 ~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      +.|..|=....+.|+.+-+.+.+..+|...++-.+=-+...+... =|.|+-+||++-|+.
T Consensus        89 ~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~  148 (153)
T 3i5g_B           89 NAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGK  148 (153)
T ss_dssp             HHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHC
T ss_pred             HHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcC
Confidence            999999433446999999999999999877654443343444434 689999999988765

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=89.85  E-value=1.5  Score=32.49  Aligned_cols=68  Identities=9%  Similarity=0.040  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHc-------CCCCCCHHHHHHHHhhCc-cccccccHHHHHhhhhhcC
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL-------QVDPQDIVMLVVSWHMKA-ATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL-------gv~~ed~~~L~la~~l~a-~~~g~~tr~eF~~g~~~l~  123 (177)
                      ...+..+|..|-....+.|+.+-+.+++..+       |....+-.+-.+-..+.. ..-|.||.+||+.-|..++
T Consensus       108 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~  183 (204)
T 3e3r_A          108 EAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVS  183 (204)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcC
Confidence            4568889988843334689999999998844       444433334444445565 6778899999988887754

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=89.85  E-value=1.8  Score=32.44  Aligned_cols=64  Identities=5%  Similarity=0.027  Sum_probs=36.9

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+  ..-|.|+.+||+..+..+
T Consensus       103 ~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~  166 (198)
T 1juo_A          103 NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKL  166 (198)
T ss_dssp             HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence            4455666666322234677777777777777665443333333333  455677777777766553

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=89.79  E-value=1.6  Score=29.84  Aligned_cols=67  Identities=10%  Similarity=0.055  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHhcCCCC--CccCHHHHHHHHhH-cC----CCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-LQ----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~--d~I~~dG~~~~~ed-Lg----v~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...|.++|..|-+.+.  +.|+.+-+.+++.. ||    -.+.+-.+=-+-..+....=|.|+-+||+..+..+
T Consensus         9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~   82 (93)
T 4eto_A            9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   82 (93)
T ss_dssp             HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            4678889999953333  59999999999984 76    23344444455556677788999999999988764

>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1

Probab=89.67  E-value=0.25  Score=34.19  Aligned_cols=40  Identities=25%  Similarity=0.282  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhC-CCCccccchhhcccc
Q 030467            8 NRDKLQQFVSITGASEKAALQALKAS-DWHLEGAFDVFYSQP   48 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~-~w~le~A~~~ff~~~   48 (177)
                      ..+.|++.+++ |-++..|++.|..+ |||++.|++-.|++.
T Consensus        29 ~e~~v~~L~~M-GF~~~~a~~AL~~t~n~n~e~A~ewL~~h~   69 (84)
T 1vek_A           29 NEEIVAQLVSM-GFSQLHCQKAAINTSNAGVEEAMNWLLSHM   69 (84)
T ss_dssp             CHHHHHHHHHH-TCCHHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            35789999995 99999999999988 599999999888764

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=89.47  E-value=0.61  Score=31.77  Aligned_cols=70  Identities=13%  Similarity=0.120  Sum_probs=43.9

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHh---HcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCC
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCN---DLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~e---dLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~  124 (177)
                      ....+..+|..|-....+.|+.+-...++.   ..+..+..-.+-.+-..+....-|.|+++||...+..+|.
T Consensus        34 ~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~  106 (134)
T 1jfj_A           34 NEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI  106 (134)
T ss_dssp             HHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTC
T ss_pred             CHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHHCCCCCCccCHHHHHHHHHHhCH
Confidence            356778888887443345788888777775   2333222222233333455667788888888888887764

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=89.45  E-value=0.71  Score=34.90  Aligned_cols=118  Identities=8%  Similarity=-0.014  Sum_probs=66.3

Q ss_pred             CCCccHHHHHH-HHHHh----hC-CCHHHHHHHHHhCCCCcccc-chhhccccC---------------CCCcCCHHHHH
Q 030467            3 KLSRSNRDKLQ-QFVSI----TG-ASEKAALQALKASDWHLEGA-FDVFYSQPQ---------------SKSLTDTRHLE   60 (177)
Q Consensus         3 ~l~~~q~~~i~-~F~~~----T~-~s~~~A~~~L~~~~w~le~A-~~~ff~~~~---------------~~~~~~~~~l~   60 (177)
                      .|++.+...++ -|..+    .| .+...-..+|...+.++... +...+....               .........|.
T Consensus        50 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~  129 (196)
T 3dtp_E           50 MFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIV  129 (196)
T ss_dssp             SSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTSSSCCBHHHHHHHHHHCCCSSCCHHHHH
T ss_pred             hCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHccCCCcHHHHHHHHHHHhcCCCcHHHHH
Confidence            45666666554 44443    22 25666677777766554221 222221110               01122356677


Q ss_pred             HHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        61 ~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      .+|..|-....+.|+.+-+.+++ .+|....+-.+-.+.-.+....-|.|+.+||+.-|..
T Consensus       130 ~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~  189 (196)
T 3dtp_E          130 NAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTK  189 (196)
T ss_dssp             HHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSS
T ss_pred             HHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHc
Confidence            77777733233578888888888 7776665555555555555556677888888777654

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=89.41  E-value=1.6  Score=32.01  Aligned_cols=84  Identities=8%  Similarity=-0.004  Sum_probs=59.2

Q ss_pred             CCHHHHHHHHHHhcCC-CCCccCHHHHHHHHhHcCCC-CCCHHHHHHHHhhCccccccccHHHHHhhhhhcCCC-cHHHH
Q 030467           54 TDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID-SLDKF  130 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~-~~d~I~~dG~~~~~edLgv~-~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~d-sl~~l  130 (177)
                      .....+.++|+.|... ....|+.+-+..++..+|.. +.+..+-.+-..+....-|.|+.+||+..+..++.. +.+.+
T Consensus        22 ~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~  101 (190)
T 1fpw_A           22 FDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKL  101 (190)
T ss_dssp             STHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcHHHH
Confidence            3567788888887532 34699999999999998653 233334445556677788999999999999988753 44455


Q ss_pred             HHHHHHH
Q 030467          131 RERISFM  137 (177)
Q Consensus       131 k~~l~~l  137 (177)
                      +..+..+
T Consensus       102 ~~~f~~~  108 (190)
T 1fpw_A          102 SWAFELY  108 (190)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            5555444

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=89.39  E-value=0.6  Score=35.25  Aligned_cols=69  Identities=6%  Similarity=0.034  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHh---cCCCCCccCHHHHHHHHhHcCC-CCCCHHHHHHHHhhCccccccccHHHHHhhhh-hcCCC
Q 030467           56 TRHLEELYNRY---KDPYLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ-SLGID  125 (177)
Q Consensus        56 ~~~l~~lF~~Y---~d~~~d~I~~dG~~~~~edLgv-~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~-~l~~d  125 (177)
                      ...+.++|+.+   .+.+.+.|+.+....++..+.- +++.-. -.+-..+-...-|.|+++|+...+. .+|..
T Consensus        58 ~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~l-~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~  131 (179)
T 3a8r_A           58 DEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRL-RTFFDMVDKNADGRLTAEEVKEIIALSASAN  131 (179)
T ss_dssp             HHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHHHHH-HHHHHHHCTTCSSCBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHHHHH-HHHHHHHCCCCCCcCCHHHHHHHHHHHhccc
Confidence            34444444433   2333345666666666554421 233221 1112234555666777777777766 56544

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=89.39  E-value=0.58  Score=35.57  Aligned_cols=65  Identities=9%  Similarity=-0.056  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHc--CCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL--QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL--gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ...+..+|..|-......|+.+-+.+++..+  |....+-.+-.+...+....-|.|+.+||+.-|+
T Consensus       128 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~  194 (197)
T 3pm8_A          128 KEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMS  194 (197)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence            3456666666622223466666666666666  4433333333344444555556666666666554

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=89.22  E-value=1.6  Score=32.12  Aligned_cols=64  Identities=5%  Similarity=-0.014  Sum_probs=42.9

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..+..+|..|-......|+.+-+..++..+|++++.+.  .+-..+....-|.|+.+||+..+..+
T Consensus       109 ~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~--~~~~~~D~d~dG~i~~~Ef~~~~~~~  172 (191)
T 2ccm_A          109 KYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCD--AAFDTLSDGGKTMVTREIFARLWTEY  172 (191)
T ss_dssp             HHHHHHHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHH--HHHHHHTTTTTSCCBHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHH--HHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence            45677787774333458888888888888885544333  33334555667888888888877654

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=89.18  E-value=1.5  Score=32.94  Aligned_cols=62  Identities=10%  Similarity=0.124  Sum_probs=48.9

Q ss_pred             HHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        59 l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      +..+|..|-......|+.+-+.+++..+|++++++..  +...+....-|.|+.+||+..|...
T Consensus       130 ~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~--~~~~~D~d~dG~I~~~EF~~~~~~~  191 (208)
T 2hpk_A          130 SNSYYDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYT--FFEKADTDKSGKLERTELVHLFRKF  191 (208)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHHTTSCTTHHHH--HHHHHCTTCCSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHHhCcCHHHHHH--HHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            7889999944344699999999999999976665543  3345566778999999999998874

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=89.15  E-value=2.9  Score=32.14  Aligned_cols=68  Identities=10%  Similarity=0.109  Sum_probs=51.9

Q ss_pred             CCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHc----CCCCCCHHHHH----HHHhhCccccccccHHHHHhhhhh
Q 030467           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDPQDIVMLV----VSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL----gv~~ed~~~L~----la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      .....+..+|..|-......|+.+-+..++..+    |..+.+-.+--    +...+....-|.|+.+||+..|..
T Consensus       100 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~  175 (263)
T 2f33_A          100 KSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPV  175 (263)
T ss_dssp             SCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCT
T ss_pred             cHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHH
Confidence            356788899999844344699999999999988    88876544432    555667777899999999988764

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=89.13  E-value=0.62  Score=31.80  Aligned_cols=67  Identities=12%  Similarity=0.055  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHhcCCCC-C-ccCHHHHHHHHhH-----cCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYL-D-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~-d-~I~~dG~~~~~ed-----Lgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...|.++|..|-+.+. . .|+.+-+..++..     ||..+.+-.+--+...+....-|.|+-+||+..|..+
T Consensus        11 ~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~~   84 (95)
T 2wcb_A           11 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA   84 (95)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            4578899999952333 3 8999999999976     6766665555555556667778999999999988753

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=89.04  E-value=3.1  Score=31.57  Aligned_cols=68  Identities=10%  Similarity=0.110  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ...+.++|..+-......|+.+-...++..++..+..-.+-.+-..+-...-|.|+++||...+..++
T Consensus        56 ~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~  123 (211)
T 2ggz_A           56 NKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQ  123 (211)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence            34588899988543446899999999998888766444444444466677889999999999988874

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=88.99  E-value=2.1  Score=30.02  Aligned_cols=67  Identities=12%  Similarity=0.065  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHhcCCCC--CccCHHHHHHHHhH-cC----CCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-LQ----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~--d~I~~dG~~~~~ed-Lg----v~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...|.++|..|-+.+.  +.|+.+-+..++.. ||    ..+.+-.+=-+-..+....=|.|+-+||+..|..+
T Consensus        12 ~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~   85 (104)
T 3zwh_A           12 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI   85 (104)
T ss_dssp             HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            4678889999963333  49999999999985 65    33444455555566777888999999999988765

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=88.90  E-value=1.4  Score=31.11  Aligned_cols=65  Identities=8%  Similarity=0.038  Sum_probs=49.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....+.++|+.|-. .+..|+.+-+...+..+|++.+++.-  +-.......-|.|+.+||+..|..+
T Consensus        13 e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~gl~~~el~~--i~~~~D~d~dG~id~~EF~~~m~~~   77 (106)
T 1eh2_A           13 DKAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKLPVDILGR--VWELSDIDHDGMLDRDEFAVAMFLV   77 (106)
T ss_dssp             HHHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTTCCHHHHHH--HHHHHCSSCSSBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcCCCHHHHHH--HHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            35678888988854 55799999999999999976544333  3334566778999999999998764

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=88.77  E-value=0.53  Score=33.82  Aligned_cols=61  Identities=18%  Similarity=0.262  Sum_probs=22.6

Q ss_pred             HHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        58 ~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      .+..+|..|-....+.|+.+-+.+++..+|++++.+..+  ...+....-|.|+.+||+.-+.
T Consensus       100 ~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~--~~~~d~~~dg~i~~~eF~~~~~  160 (166)
T 2aao_A          100 HLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEEL--MRDVDQDNDGRIDYNEFVAMMQ  160 (166)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHTCC--------CCH--HHHHCTTCSSSBCHHHHHHHHC
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHH--HHHhCCCCCCcEeHHHHHHHHH
Confidence            344445444222223455555555555555443332221  1222333344555555554443

>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}

Probab=88.70  E-value=0.38  Score=34.55  Aligned_cols=34  Identities=29%  Similarity=0.357  Sum_probs=29.6

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCCCCccccch
Q 030467            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFD   42 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~   42 (177)
                      .+.|+-.++-||+|...|++.|+.+++|+=.|+-
T Consensus        66 ~edi~lv~~q~~vs~~~A~~aL~~~~gDiv~Ai~   99 (102)
T 1tr8_A           66 EDDIELVMNQTGASREDATRALQETGGDLAEAIM   99 (102)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHH
Confidence            3558888899999999999999999999977763

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=88.63  E-value=1.4  Score=34.19  Aligned_cols=64  Identities=13%  Similarity=0.025  Sum_probs=50.1

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHc---CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL---gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..+..+|..|-......|+.+-+.+++..+   |+.++++.  .+...+....-|.|+.+||+.-|...
T Consensus       133 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~--~~~~~~D~d~dG~Is~~EF~~~~~~~  199 (226)
T 2lvv_A          133 FELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDAT--TVFNEIDTNGSGVVTFDEFSCWAVTK  199 (226)
T ss_dssp             HHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCH--HHHHHHCCSCSSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHH--HHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence            378889999843334699999999999888   99998743  33445566778999999999988764

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=88.58  E-value=4.5  Score=28.86  Aligned_cols=67  Identities=7%  Similarity=0.093  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcC----CCCCCHH-HH--------HHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQ----VDPQDIV-ML--------VVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLg----v~~ed~~-~L--------~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..+|.++|+.+-......|+.+-+...+..+|    ++|.+.. +.        .+...+.  .-|.|+.+||+..+..+
T Consensus         5 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~~   82 (174)
T 1q80_A            5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKEM   82 (174)
T ss_dssp             HHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHHH
Confidence            46789999999333346999999999999988    9987655 21        1222333  66899999999998886


Q ss_pred             CC
Q 030467          123 GI  124 (177)
Q Consensus       123 ~~  124 (177)
                      ..
T Consensus        83 ~~   84 (174)
T 1q80_A           83 VK   84 (174)
T ss_dssp             TT
T ss_pred             cC
Confidence            43

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=88.53  E-value=1.9  Score=31.86  Aligned_cols=81  Identities=12%  Similarity=0.139  Sum_probs=53.0

Q ss_pred             HHHHHHHHHhc--CCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC----CCcHHHH
Q 030467           57 RHLEELYNRYK--DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG----IDSLDKF  130 (177)
Q Consensus        57 ~~l~~lF~~Y~--d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~----~dsl~~l  130 (177)
                      ..|.+.|+.|-  +.....|+.+=+...+..||++|.+-.+--+... ....-|.|+-++|+.-|..+.    ..+.+.+
T Consensus         9 ~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~~-d~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~l   87 (159)
T 3i5g_C            9 EEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGT-KKMGEKAYKLEEILPIYEEMSSKDTGTAADEF   87 (159)
T ss_dssp             HHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTCC-SSTTSCEECHHHHHHHHHHHTTCCTTCCHHHH
T ss_pred             HHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHcc-cccCCCcccHHHHHHHHHHhhcccccchHHHH
Confidence            45667777773  1234589999999999999999976554333211 222356899999998876643    3345556


Q ss_pred             HHHHHHHH
Q 030467          131 RERISFMR  138 (177)
Q Consensus       131 k~~l~~l~  138 (177)
                      +.....+.
T Consensus        88 ~~aF~~fD   95 (159)
T 3i5g_C           88 MEAFKTFD   95 (159)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHh
Confidence            66555443

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=88.46  E-value=4.2  Score=31.16  Aligned_cols=81  Identities=14%  Similarity=0.050  Sum_probs=52.0

Q ss_pred             HHHHHHHHHHhcCC--CCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCC--CcHHHHH
Q 030467           56 TRHLEELYNRYKDP--YLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI--DSLDKFR  131 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~--~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~--dsl~~lk  131 (177)
                      ...+.++|..+-..  ....|+.+-+...+.. +..+.++.+--+-..+....-|.|+.+||+..+..++.  .+.+.++
T Consensus        47 i~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~  125 (226)
T 2zfd_A           47 IEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIH  125 (226)
T ss_dssp             HHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHH
T ss_pred             HHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHH
Confidence            35566677777443  3468888888888865 44444443333666677778889999999998887652  2344455


Q ss_pred             HHHHHH
Q 030467          132 ERISFM  137 (177)
Q Consensus       132 ~~l~~l  137 (177)
                      .....+
T Consensus       126 ~~F~~~  131 (226)
T 2zfd_A          126 FSFQLY  131 (226)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            544443

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=88.12  E-value=0.17  Score=34.39  Aligned_cols=65  Identities=11%  Similarity=0.058  Sum_probs=44.6

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHc---CCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL---gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ...+..+|..|-......|+.+-+.+++..+   |..+.+-.+-.+...+....-|.|+.+||+..|+
T Consensus        40 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  107 (108)
T 2kyc_A           40 SSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ  107 (108)
T ss_dssp             SSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence            4567788888833334588888888888888   6655444433444455666778899999987764

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=88.12  E-value=2.1  Score=29.02  Aligned_cols=65  Identities=8%  Similarity=-0.017  Sum_probs=46.4

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhH-----cCCCCCCH-----------HHHHHHHhhCccccccccHHHHHhhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCND-----LQVDPQDI-----------VMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~ed-----Lgv~~ed~-----------~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ..+..+|..|=......|+.+=+..++..     +|..+.+.           .+-.+...+....-|.||.+||+..+.
T Consensus        20 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~   99 (103)
T 1snl_A           20 FNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ   99 (103)
T ss_dssp             CCHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred             CCHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHh
Confidence            34778898883323359999999999986     68876542           122344456677789999999999876


Q ss_pred             h
Q 030467          121 S  121 (177)
Q Consensus       121 ~  121 (177)
                      .
T Consensus       100 ~  100 (103)
T 1snl_A          100 R  100 (103)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=88.06  E-value=2.8  Score=32.51  Aligned_cols=82  Identities=13%  Similarity=0.167  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHhcCCCC-CccCHHHHHHHHhHc-CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCC-CcHHHHHH
Q 030467           56 TRHLEELYNRYKDPYL-DMILVDGITLLCNDL-QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI-DSLDKFRE  132 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~-d~I~~dG~~~~~edL-gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~-dsl~~lk~  132 (177)
                      +..+..++..|++.++ ..|+.+-+..++..+ +..+....+-.+-..+....-|.|+.+||+.++..+.. .+-++++.
T Consensus        63 ~~ei~~l~~~F~~~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~  142 (229)
T 3dd4_A           63 KKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNW  142 (229)
T ss_dssp             HHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHH
Confidence            4567777777754333 578888888888774 33344444445566677777888999999988887642 23334444


Q ss_pred             HHHHH
Q 030467          133 RISFM  137 (177)
Q Consensus       133 ~l~~l  137 (177)
                      ....+
T Consensus       143 ~F~~~  147 (229)
T 3dd4_A          143 AFNLY  147 (229)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            44433

>2d9s_A CBL E3 ubiquitin protein ligase; UBA domain, dimer, protein binding, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=88.04  E-value=0.54  Score=30.01  Aligned_cols=36  Identities=19%  Similarity=0.243  Sum_probs=30.9

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhc
Q 030467            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff   45 (177)
                      ...|.+.|++ |-+...|++.|...+||+|.|.+---
T Consensus        10 e~~I~~L~~l-GF~r~~ai~AL~~a~nnve~Aa~iL~   45 (53)
T 2d9s_A           10 SSEIERLMSQ-GYSYQDIQKALVIAHNNIEMAKNILR   45 (53)
T ss_dssp             HHHHHHHHHH-TCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHhcCCHHHHHHHHH
Confidence            3568888884 99999999999999999999987543

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=88.02  E-value=2.3  Score=29.81  Aligned_cols=67  Identities=16%  Similarity=0.116  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHhcC-CCCC-ccCHHHHHHHHh-HcCCC---C--CCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKD-PYLD-MILVDGITLLCN-DLQVD---P--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d-~~~d-~I~~dG~~~~~e-dLgv~---~--ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...|.++|..|-. .... .|+.+=+.+++. .||..   |  ..-.+-.+...+....-|.|+-+||+..|..+
T Consensus        11 ~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   85 (113)
T 1xk4_C           11 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARL   85 (113)
T ss_dssp             HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence            3578889999964 4445 899999999998 88852   2  33344445556677778999999999988764

>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A

Probab=87.97  E-value=0.48  Score=30.11  Aligned_cols=32  Identities=19%  Similarity=0.225  Sum_probs=29.0

Q ss_pred             HHHHHHHHhhCCCHHHHHHHHHhCCCCccccch
Q 030467           10 DKLQQFVSITGASEKAALQALKASDWHLEGAFD   42 (177)
Q Consensus        10 ~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~   42 (177)
                      +.|.+.|+ .|-|...|++.|+..+||++.|.+
T Consensus        13 ~~Ia~Lm~-mGFsr~~ai~AL~~a~nnve~Aan   44 (52)
T 2ooa_A           13 AKIAKLMG-EGYAFEEVKRALEIAQNNVEVARS   44 (52)
T ss_dssp             HHHHHHHH-TTCCHHHHHHHHHHTTTCHHHHHH
T ss_pred             HHHHHHHH-cCCCHHHHHHHHHHhCCCHHHHHH
Confidence            67888888 499999999999999999999876

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=87.64  E-value=2  Score=33.09  Aligned_cols=66  Identities=9%  Similarity=0.048  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcC-------CCCCCHHHHH--HHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQ-------VDPQDIVMLV--VSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLg-------v~~ed~~~L~--la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...+..+|..|=......|+.+-+.+++..+|       ++++++..++  +...+....=|.|+.+||+..+..
T Consensus       128 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  202 (214)
T 2l4h_A          128 DIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR  202 (214)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            35788888888433346888888888888775       3445444332  444556666788999999888765

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=87.49  E-value=5.1  Score=29.83  Aligned_cols=65  Identities=3%  Similarity=-0.024  Sum_probs=33.8

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHH-hhCccccccccHHHHHhhhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~-~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ..+.++|..+-....+.|+.+-...++..++........+..++ .+....-|.|+++||...++.
T Consensus        74 ~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~  139 (207)
T 2ehb_A           74 LFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVA  139 (207)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            34455666663323346666666666666654332222222222 344555666666666666654

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=87.49  E-value=2  Score=32.13  Aligned_cols=65  Identities=9%  Similarity=0.003  Sum_probs=50.3

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....+.++|+.|- +.+..|+.+-+..++..+|++.+++.  -|-.......-|.|+.+||+..|..+
T Consensus        49 e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~gl~~~el~--~I~~~~D~d~dG~Ld~~EF~~am~li  113 (139)
T 2jq6_A           49 DKPTYDEIFYTLS-PVNGKITGANAKKEMVKSKLPNTVLG--KIWKLADVDKDGLLDDEEFALANHLI  113 (139)
T ss_dssp             THHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTTCCHHHHH--HHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhCcCHHHHH--HHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            4688999999996 54569999999999999997654332  22234566778999999999998764

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=87.44  E-value=2.4  Score=30.49  Aligned_cols=78  Identities=6%  Similarity=-0.042  Sum_probs=46.0

Q ss_pred             CCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCCC-cHHHHHH
Q 030467           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID-SLDKFRE  132 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~d-sl~~lk~  132 (177)
                      .....+.++|..+-...++.|+.+-...++..+      -.+-.+-..+-...-|.|+++||...+..+|.. +.+.++.
T Consensus        37 ~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~  110 (165)
T 1k94_A           37 FSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTT  110 (165)
T ss_dssp             CCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHH
T ss_pred             CCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHH
Confidence            356667777777643333567777777766653      111122223445566788888888888777754 4555555


Q ss_pred             HHHHH
Q 030467          133 RISFM  137 (177)
Q Consensus       133 ~l~~l  137 (177)
                      .+..+
T Consensus       111 ~~~~~  115 (165)
T 1k94_A          111 IVKRY  115 (165)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            55554

>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=86.69  E-value=0.54  Score=30.08  Aligned_cols=38  Identities=8%  Similarity=0.162  Sum_probs=32.6

Q ss_pred             HHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467           11 KLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus        11 ~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      .++++.++==+++..-++.|++++||++.||+.-.+.+
T Consensus        12 ~L~~L~eMGF~D~~~N~~aL~~~~gnv~~aI~~Ll~~~   49 (54)
T 2cp8_A           12 LMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLS   49 (54)
T ss_dssp             HHHHHHHHTCCCHHHHHHHHTTTTTCHHHHHHHHHHHS
T ss_pred             HHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence            57888887667899999999999999999998876544

>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*

Probab=86.42  E-value=0.35  Score=35.52  Aligned_cols=89  Identities=20%  Similarity=0.219  Sum_probs=58.4

Q ss_pred             CCCCccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccccC-CCCcCCHHHHHHHHHHhcCCCC-CccCHHHH
Q 030467            2 HKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ-SKSLTDTRHLEELYNRYKDPYL-DMILVDGI   79 (177)
Q Consensus         2 ~~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~-~~~~~~~~~l~~lF~~Y~d~~~-d~I~~dG~   79 (177)
                      +.|++.+++.|.++++ .|-++..+++-|++.+.|.+.|++--+.... .-+..++..++..++.+..... ....++. 
T Consensus         2 ~~l~~~e~~~v~~l~~-MGFp~~~~~kAl~~~g~~~e~amewL~~h~~L~d~~~d~~~~e~~l~~~~~~~~~~~~~~~~-   79 (118)
T 4ae4_A            2 SHMSPSERQCVETVVN-MGYSYECVLRAMKAAGANIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQL-   79 (118)
T ss_dssp             CCSCHHHHHHHHHHHH-TTCCHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHH-
T ss_pred             CCCCHHHHHHHHHHHH-cCCCHHHHHHHHHHHCcCHHHHHHHHHHhchhcccCCChhhhHHHHHhccCCccccccCHHH-
Confidence            3589999999999988 5999999999999988899999998886521 0012245566666766643211 1222222 


Q ss_pred             HHHHhHcCCCCCC
Q 030467           80 TLLCNDLQVDPQD   92 (177)
Q Consensus        80 ~~~~edLgv~~ed   92 (177)
                      +.-+.++|++.+.
T Consensus        80 v~~L~eMGF~~~~   92 (118)
T 4ae4_A           80 MSKFKEMGFELKD   92 (118)
T ss_dssp             HHHHHHTTCCHHH
T ss_pred             HHHHHHcCCCHHH
Confidence            3333467776543

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=86.41  E-value=2.8  Score=30.66  Aligned_cols=79  Identities=9%  Similarity=0.019  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHhcC-----CC-C--CccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCcccccc-ccHHHHHhhhhhcCCC-
Q 030467           56 TRHLEELYNRYKD-----PY-L--DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCE-FSKQEFIGGLQSLGID-  125 (177)
Q Consensus        56 ~~~l~~lF~~Y~d-----~~-~--d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~-~tr~eF~~g~~~l~~d-  125 (177)
                      ...+.++|..+-.     .. .  ..|+.+-+.. +..+|.+|..-.++   ..+....-|. |+.+||+..|..+.-. 
T Consensus        19 ~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~~l~---~~~D~d~~G~~I~~~EF~~~~~~~~~~~   94 (183)
T 1dgu_A           19 ILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKERIC---RVFSTSPAKDSLSFEDFLDLLSVFSDTA   94 (183)
T ss_dssp             HHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHHHHH---HHHSCSSSSCCCCHHHHHHHHHHHSTTC
T ss_pred             HHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHHHHH---HHhCCCCCCCEecHHHHHHHHHHhcCCC
Confidence            4556667777743     23 4  6899999999 99999998754433   3456677889 9999999999876422 


Q ss_pred             -cHHHHHHHHHHHH
Q 030467          126 -SLDKFRERISFMR  138 (177)
Q Consensus       126 -sl~~lk~~l~~l~  138 (177)
                       ....++.....+.
T Consensus        95 ~~~~~l~~~F~~~D  108 (183)
T 1dgu_A           95 TPDIKSHYAFRIFD  108 (183)
T ss_dssp             CHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHhC
Confidence             2335555554443

>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}

Probab=86.41  E-value=0.48  Score=34.72  Aligned_cols=41  Identities=32%  Similarity=0.518  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccccC
Q 030467            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~   49 (177)
                      ..+.|.+.+++ |.++..|++.|+.++||++.|++--|+++.
T Consensus        78 ~e~~v~~L~~M-GF~~~~a~~AL~~~~~~~e~A~e~L~~~~~  118 (126)
T 2lbc_A           78 PEEIVAIITSM-GFQRNQAIQALRATNNNLERALDWIFSHPE  118 (126)
T ss_dssp             CHHHHHHHHHH-TSCHHHHHHHHHHHTSCHHHHHHHHHTCCS
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence            35679999995 999999999999999999999998887654

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=86.35  E-value=2.6  Score=32.65  Aligned_cols=66  Identities=15%  Similarity=0.089  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHc------------CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL------------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL------------gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...+..+|..|-....+.|+.+-+.+++..+            |....+-.+-.+-..+....-|.||.+||+..++.
T Consensus       137 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~  214 (229)
T 3dd4_A          137 QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK  214 (229)
T ss_dssp             HHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence            4567888888843334689999999998876            33333334444455667777889999999988874

>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4

Probab=86.10  E-value=1  Score=28.13  Aligned_cols=40  Identities=13%  Similarity=0.197  Sum_probs=32.6

Q ss_pred             HHHHHHHHHHh-hCCCHHHHHHHHHhCCCCccccchhhccc
Q 030467            8 NRDKLQQFVSI-TGASEKAALQALKASDWHLEGAFDVFYSQ   47 (177)
Q Consensus         8 q~~~i~~F~~~-T~~s~~~A~~~L~~~~w~le~A~~~ff~~   47 (177)
                      ..+.++..+++ =.++..+++..|+++++|++.|++.-.+-
T Consensus         4 ~e~~v~~L~EMFP~~~~~~ik~~L~~~~Gd~d~Ai~~LL~~   44 (49)
T 1otr_A            4 HESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKE   44 (49)
T ss_dssp             HHHHHHHHHHHCSSSCHHHHHHHHHHTTTCSHHHHHHHHHH
T ss_pred             hHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence            34567777777 57789999999999999999999876543

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=85.89  E-value=3.1  Score=29.19  Aligned_cols=65  Identities=11%  Similarity=0.047  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHhc-CCCC-CccCHHHHHHHHhH-cCCC---CCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYK-DPYL-DMILVDGITLLCND-LQVD---PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~-d~~~-d~I~~dG~~~~~ed-Lgv~---~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...|.++|..|- ...+ +.|+.+-+..++.. ||..   ++.+.-  +...+....-|.|+-+||+..|...
T Consensus        21 ~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~--li~~~D~d~dG~Idf~EF~~~~~~~   91 (106)
T 2h2k_A           21 IETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDE--KMKSLDVNQDSELKFNEYWRLIGEL   91 (106)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHH--HHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHH--HHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            457889999995 2222 49999999999975 7732   233433  3345667778999999999988764

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=85.83  E-value=0.9  Score=31.30  Aligned_cols=65  Identities=12%  Similarity=0.103  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhH-----cCC--CCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCND-----LQV--DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~ed-----Lgv--~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...|.++|..|-+. .+.|+.+-+..++..     ||.  .+.+-.+--+...+....-|.|+-+||+..|..
T Consensus         9 ~~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~   80 (100)
T 1psr_A            9 IIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD   80 (100)
T ss_dssp             HHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            46788899999533 459999999999976     554  333222223344566777899999999998865

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=84.96  E-value=4.9  Score=34.59  Aligned_cols=85  Identities=13%  Similarity=0.139  Sum_probs=60.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHH----HHHHhHcCCCCC----------CHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGI----TLLCNDLQVDPQ----------DIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~----~~~~edLgv~~e----------d~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ..+.+.++|+.|-...+..|+.+-+    .+++..+|++|.          +-.+-.+-..+....-|.|+.+||+..+.
T Consensus       329 ~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~  408 (486)
T 3mwu_A          329 ETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAI  408 (486)
T ss_dssp             HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHS
T ss_pred             HHHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence            3477888999984433468998888    556667799887          44455566667788899999999999876


Q ss_pred             hcC-CCcHHHHHHHHHHHHH
Q 030467          121 SLG-IDSLDKFRERISFMRA  139 (177)
Q Consensus       121 ~l~-~dsl~~lk~~l~~l~~  139 (177)
                      ... ..+.+.++.....++.
T Consensus       409 ~~~~~~~~~~~~~~F~~~D~  428 (486)
T 3mwu_A          409 DRTILLSRERMERAFKMFDK  428 (486)
T ss_dssp             CTTTTCCHHHHHHHHHHHCS
T ss_pred             hhhccchHHHHHHHHHHhCC
Confidence            643 3455666666655543

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=84.74  E-value=1.8  Score=32.45  Aligned_cols=70  Identities=7%  Similarity=-0.021  Sum_probs=42.8

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCC
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~  124 (177)
                      ....+..+|..+-....+.|+.+-...++..+.-....-.+..+-..+-...-|.||++||...+..+|.
T Consensus        44 ~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~  113 (188)
T 1s6i_A           44 MESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGL  113 (188)
T ss_dssp             CHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC
T ss_pred             CHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC
Confidence            3567778888774433457888777777765543221112222223445666788888888888887774

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=84.11  E-value=1.8  Score=36.07  Aligned_cols=64  Identities=16%  Similarity=0.079  Sum_probs=43.8

Q ss_pred             CHHHHHH-HHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhh-hhcCC
Q 030467           55 DTRHLEE-LYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL-QSLGI  124 (177)
Q Consensus        55 ~~~~l~~-lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~-~~l~~  124 (177)
                      ....+.. +|..+-.+.++.|+.+....++..+.      .+..+-..+-...-|.||++||...+ ..+|.
T Consensus       220 ~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~------~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~  285 (323)
T 1ij5_A          220 DKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL------VLRILYAFADFDKSGQLSKEEVQKVLEDAHIP  285 (323)
T ss_dssp             CCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH------HHHHHHHHTCSSSCSSEEHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH------HHHHHHHHhCCCCCCCccHHHHHHHHHHHcCC
Confidence            3566788 88887443445788888888876654      23333344556677888888888888 77764

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=84.10  E-value=6.2  Score=28.93  Aligned_cols=120  Identities=8%  Similarity=0.046  Sum_probs=74.9

Q ss_pred             CCCCccHHHHHHH-HHHh-h-----C-CCHHHHHHHHHhCCCCcccc-chhhccccCC--------------------CC
Q 030467            2 HKLSRSNRDKLQQ-FVSI-T-----G-ASEKAALQALKASDWHLEGA-FDVFYSQPQS--------------------KS   52 (177)
Q Consensus         2 ~~l~~~q~~~i~~-F~~~-T-----~-~s~~~A~~~L~~~~w~le~A-~~~ff~~~~~--------------------~~   52 (177)
                      ++||++|.+.+++ |..+ +     | .+...-...|+.-|.++..+ +..+......                    ..
T Consensus         1 sqLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~~d~~~~g~i~f~eFl~~~~~~~~~~~   80 (159)
T 3i5g_C            1 SQLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGEKAYKLEEILPIYEEMSSKDT   80 (159)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTCCSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred             CCCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHcccccCCCcccHHHHHHHHHHhhcccc
Confidence            4688888777753 5443 1     2 24555667788777764322 3333321110                    11


Q ss_pred             cCCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCc--cccccccHHHHHhhhhh
Q 030467           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKA--ATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        53 ~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a--~~~g~~tr~eF~~g~~~  121 (177)
                      ......|.+.|..|=......|+.+-+.+.+..+|....+-.+=.|...+..  -.-|.|+-+||++-|..
T Consensus        81 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~  151 (159)
T 3i5g_C           81 GTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA  151 (159)
T ss_dssp             TCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHC
Confidence            2335678888988843334689999999999999987755444444444443  44689999999988765

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=84.07  E-value=7.1  Score=28.39  Aligned_cols=78  Identities=14%  Similarity=0.136  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC--CCcHHHHHHH
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG--IDSLDKFRER  133 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~--~dsl~~lk~~  133 (177)
                      -..|.+.|+.|=......|+.+-+...+..||..|.+-.+-.+-.    ..-|.|+-++|+..|....  .++-+.|+..
T Consensus        15 i~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~----~~~~~i~f~ef~~~~~~~~~~~~~~~~l~~a   90 (153)
T 3i5g_B           15 MQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLK----ECPGQLNFTAFLTLFGEKVSGTDPEDALRNA   90 (153)
T ss_dssp             HHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHH----TSSSCCCSHHHHHTTTTTTTTCCCHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHH----hccCCccHHHHHHHHHhhhcccccHHHHHHH
Confidence            466777899983333469999999999999999997655433221    2345688888888776542  3445555555


Q ss_pred             HHHH
Q 030467          134 ISFM  137 (177)
Q Consensus       134 l~~l  137 (177)
                      ...+
T Consensus        91 F~~f   94 (153)
T 3i5g_B           91 FSMF   94 (153)
T ss_dssp             HHTT
T ss_pred             Hhcc
Confidence            4443

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1

Probab=84.03  E-value=0.89  Score=37.18  Aligned_cols=42  Identities=17%  Similarity=0.329  Sum_probs=36.8

Q ss_pred             CCCccHHHHHHHHHHhhC-------CCHHHHHHHHHhCCCCccccchhh
Q 030467            3 KLSRSNRDKLQQFVSITG-------ASEKAALQALKASDWHLEGAFDVF   44 (177)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~-------~s~~~A~~~L~~~~w~le~A~~~f   44 (177)
                      .|++.|++.|++|.+...       .++..-.+||++.+||++.|...+
T Consensus        25 ~l~~~q~~~l~~lr~~l~~~~~~~~~dd~~LlRFLrarkfdv~~A~~~l   73 (296)
T 1aua_A           25 NLDSAQEKALAELRKLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEMF   73 (296)
T ss_dssp             TCCTTHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHcCCCHHHHHHHH
Confidence            588999999999988754       568899999999999999998776

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=83.91  E-value=5.1  Score=27.62  Aligned_cols=78  Identities=13%  Similarity=0.026  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHhcCCC---CCccCHHHHHHHHhHcC-CCCCC----HHHHHHHHhhCccccccccHHHHHhhhhhcCCCcH
Q 030467           56 TRHLEELYNRYKDPY---LDMILVDGITLLCNDLQ-VDPQD----IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSL  127 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~---~d~I~~dG~~~~~edLg-v~~ed----~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~dsl  127 (177)
                      ...|.++|..|-..+   .+.|+.+-+..++..++ -.+.+    -.+=-+...+....=|.|+-+||+..|..+...--
T Consensus        10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~~~~~   89 (100)
T 3nxa_A           10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGITGPIA   89 (100)
T ss_dssp             HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHHGGGH
T ss_pred             HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence            467889999995432   36999999999998643 33322    22333444556677899999999999988754444


Q ss_pred             HHHHHH
Q 030467          128 DKFRER  133 (177)
Q Consensus       128 ~~lk~~  133 (177)
                      ..++..
T Consensus        90 ~~~~~~   95 (100)
T 3nxa_A           90 KLIHEQ   95 (100)
T ss_dssp             HHHHHH
T ss_pred             HHHhcc
Confidence            444443

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*

Probab=83.48  E-value=1  Score=37.76  Aligned_cols=43  Identities=23%  Similarity=0.442  Sum_probs=38.0

Q ss_pred             CCCccHHHHHHHHHHhhC-------CCHHHHHHHHHhCCCCccccchhhc
Q 030467            3 KLSRSNRDKLQQFVSITG-------ASEKAALQALKASDWHLEGAFDVFY   45 (177)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~-------~s~~~A~~~L~~~~w~le~A~~~ff   45 (177)
                      .|++.|+++|++|.+...       .++..-.+||++.+||++.|...+=
T Consensus        34 ~lt~~q~~~l~~lR~~l~~~~~~~~~dD~~LLRFLRArkfdv~kA~~mL~   83 (320)
T 3q8g_A           34 NLTKEQEEALLQFRSILLEKNYKERLDDSTLLRFLRARKFDINASVEMFV   83 (320)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence            689999999999998853       5788999999999999999998773

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=83.44  E-value=1.7  Score=33.36  Aligned_cols=64  Identities=8%  Similarity=0.049  Sum_probs=46.5

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcC---CCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQ---VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLg---v~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..+..+|..|-....+.|+.+-+.+++..+|   ++++++..  +...+....-|.|+.+||+..|...
T Consensus       130 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~--l~~~~D~d~dG~I~~~EF~~~~~~~  196 (219)
T 3cs1_A          130 FELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAA--LFKELDKNGTGSVTFDEFAAWASAV  196 (219)
T ss_dssp             HHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHH--HHHHHCTTSSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHH--HHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            4578888888333346899999999998886   45555443  3344566677899999999888763

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=83.24  E-value=2.1  Score=37.25  Aligned_cols=82  Identities=10%  Similarity=0.063  Sum_probs=61.0

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHc--------CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC-CCc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL--------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG-IDS  126 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL--------gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~-~ds  126 (177)
                      ...+.++|+.+-...+..|+.+-+...+..+        |+.+.+..+-.+-..+....-|.|+.+||+..+.... -.+
T Consensus       354 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~  433 (504)
T 3q5i_A          354 RKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFS  433 (504)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTC
T ss_pred             HHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcccC
Confidence            4678899999944344699999999999888        6777666777777778888899999999999887542 234


Q ss_pred             HHHHHHHHHHH
Q 030467          127 LDKFRERISFM  137 (177)
Q Consensus       127 l~~lk~~l~~l  137 (177)
                      .+.++.....+
T Consensus       434 ~~~~~~~F~~~  444 (504)
T 3q5i_A          434 EERLRRAFNLF  444 (504)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            45555555544

>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1

Probab=83.04  E-value=1.2  Score=29.57  Aligned_cols=40  Identities=23%  Similarity=0.159  Sum_probs=32.8

Q ss_pred             HHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccccC
Q 030467           10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (177)
Q Consensus        10 ~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~   49 (177)
                      +.|.+.+++==.++...++.|+.++.|++.||+--|+.+.
T Consensus        21 ~ql~qL~~MGF~d~~an~~AL~at~Gnve~Ave~L~~~~~   60 (67)
T 2dna_A           21 KEMECLQAMGFVNYNANLQALIATDGDTNAAIYKLKSSQG   60 (67)
T ss_dssp             HHHHHHHHHTCCCHHHHHHHHHHTTSCHHHHHHHHHHCCS
T ss_pred             HHHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence            4677887754456777799999999999999999998764

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=82.73  E-value=3.1  Score=38.61  Aligned_cols=66  Identities=6%  Similarity=-0.064  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHc--------CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL--------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL--------gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .+.|.++|++|- .....|+.+-+.+.+..+        |..+..-.+-.|...+....-|.|+.+||+..|..+
T Consensus       531 ~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~  604 (714)
T 3bow_A          531 GDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI  604 (714)
T ss_dssp             CHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            567999999997 444699999999999997        777766666666677788888899999998887653

>1vdl_A Ubiquitin carboxyl-terminal hydrolase 25; UBA domain, mouse cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.5.2.1

Probab=82.57  E-value=0.98  Score=30.85  Aligned_cols=40  Identities=33%  Similarity=0.330  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHhhCCC-HHHHHHHHHhCCCCccccchhhccc
Q 030467            8 NRDKLQQFVSITGAS-EKAALQALKASDWHLEGAFDVFYSQ   47 (177)
Q Consensus         8 q~~~i~~F~~~T~~s-~~~A~~~L~~~~w~le~A~~~ff~~   47 (177)
                      ++-.++|..+|||+. ...-.+.|+.++.||..|+.---+.
T Consensus        24 ~q~lLnQLrEITGiqD~~~L~~ALkas~Gdl~~AV~~LT~~   64 (80)
T 1vdl_A           24 QQTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAK   64 (80)
T ss_dssp             HHHHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhCCCcHHHHHHHHHhccCCHHHHHHHHhcc
Confidence            344689999999996 6778899999999999998765444

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=82.35  E-value=5.3  Score=29.72  Aligned_cols=68  Identities=6%  Similarity=-0.008  Sum_probs=49.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHh----HcCCCCCCHHHHHHH----HhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCN----DLQVDPQDIVMLVVS----WHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~e----dLgv~~ed~~~L~la----~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....+..+|..|-....+.|+.+-+.+++.    .+|....+-.+-.+.    ..+....-|.|+.+||+..+...
T Consensus       109 ~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~  184 (207)
T 2ehb_A          109 VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLN  184 (207)
T ss_dssp             HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence            356789999998443346999999999985    567666543332222    35677788999999999998863

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=82.28  E-value=5.7  Score=30.43  Aligned_cols=66  Identities=9%  Similarity=0.063  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHh----HcCCCCCCHHHHHHH----HhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCN----DLQVDPQDIVMLVVS----WHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~e----dLgv~~ed~~~L~la----~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...+..+|..|-....+.|+.+-+.+++.    .+|....+-.+-.+.    ..+....-|.|+.+||+..+..
T Consensus       121 ~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~  194 (226)
T 2zfd_A          121 DDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR  194 (226)
T ss_dssp             HHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            34566666666322234666666666663    455544332222222    1444555666677777666654

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=81.78  E-value=3.6  Score=29.89  Aligned_cols=55  Identities=11%  Similarity=0.105  Sum_probs=37.3

Q ss_pred             CCCC-CccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           68 DPYL-DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        68 d~~~-d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      |.+. ..|+.+-+.+++..+|....+-.+-.+-..+....-|.|+.+||+..+..+
T Consensus       112 D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~~~  167 (186)
T 2hps_A          112 DTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDF  167 (186)
T ss_dssp             CTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             cCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            4433 478888888888888855544444444455566667888888888877664

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=81.76  E-value=1.6  Score=37.60  Aligned_cols=67  Identities=10%  Similarity=-0.015  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHH----HHHHhHcCCCCC-------CHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGI----TLLCNDLQVDPQ-------DIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~----~~~~edLgv~~e-------d~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+.++|+.+-...+..|+.+-+    .+++..+|.+|.       +..+--+-..+....-|.|+.+||+..+...
T Consensus       334 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~  411 (484)
T 3nyv_A          334 TKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDR  411 (484)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhc
Confidence            357888899984433468998888    666677899887       4455556666777788999999999988765

>1aip_C EF-TS, elongation factor TS; nucleotide exchange, GTP-binding, complex of two elongation factors; 3.00A {Thermus thermophilus} SCOP: a.5.2.2 d.43.1.1

Probab=81.56  E-value=1.3  Score=35.42  Aligned_cols=37  Identities=22%  Similarity=0.362  Sum_probs=34.1

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhc
Q 030467            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff   45 (177)
                      .++|.+.++.||+.--.+...|..++||++.|++---
T Consensus         4 a~~VKeLRe~TGagmmdCKkAL~e~~GD~ekAie~LR   40 (196)
T 1aip_C            4 MELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLR   40 (196)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence            5689999999999999999999999999999998654

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=81.56  E-value=3.9  Score=36.29  Aligned_cols=63  Identities=10%  Similarity=0.076  Sum_probs=32.7

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~  119 (177)
                      ..+..+|..|-......|+.+-+.+++..+|....+-.+-.|...+....-|.|+.+||+.-|
T Consensus       385 e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L  447 (450)
T 3sg6_A          385 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM  447 (450)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHH
T ss_pred             hHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            345555555522222456666666666666555544444444444454555566666665544

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*

Probab=81.39  E-value=0.5  Score=37.67  Aligned_cols=42  Identities=19%  Similarity=0.256  Sum_probs=30.9

Q ss_pred             CCCccHHHHHHHHHHhhC----------CCHHHHHHHHHhCCCCccccchhh
Q 030467            3 KLSRSNRDKLQQFVSITG----------ASEKAALQALKASDWHLEGAFDVF   44 (177)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~----------~s~~~A~~~L~~~~w~le~A~~~f   44 (177)
                      .||+.|++.|.+|.+..+          .++....+||++.+||++.|...+
T Consensus         3 ~ls~~~~~~l~~lr~~l~~~~~~~~~~~~dd~~LlRFLra~k~dv~~A~~~l   54 (262)
T 1r5l_A            3 HMSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLL   54 (262)
T ss_dssp             ------CTTHHHHHHHHHHHTCCCSSSCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHhCCcccCCCCCCHHHHHHHHHhCCCCHHHHHHHH
Confidence            578888888888887653          478999999999999999998865

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=81.33  E-value=7.5  Score=28.94  Aligned_cols=63  Identities=10%  Similarity=0.002  Sum_probs=28.0

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHH-HhhCccccccccHHHHHhhhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVS-WHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la-~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ..+..+|..+-....+.|+.+-...++....-  .....+.-+ ..+-...-|.||++||...+..
T Consensus        87 ~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~--~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~  150 (191)
T 3k21_A           87 YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQ--LSKKLIYCAFRVFDVDNDGEITTAELAHILYN  150 (191)
T ss_dssp             TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGG--CCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhh--ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            34555555553222235555555555433221  111122222 2334445556666666666555

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=81.13  E-value=5.7  Score=29.66  Aligned_cols=14  Identities=14%  Similarity=0.088  Sum_probs=6.5

Q ss_pred             ccccHHHHHhhhhh
Q 030467          108 CEFSKQEFIGGLQS  121 (177)
Q Consensus       108 g~~tr~eF~~g~~~  121 (177)
                      |.|+.++|+.-|..
T Consensus        77 ~~i~~~ef~~~~~~   90 (179)
T 3a8r_A           77 QVLTKDELKDFYEQ   90 (179)
T ss_dssp             SEECHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHH
Confidence            34555555444443

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=80.65  E-value=4  Score=30.49  Aligned_cols=65  Identities=12%  Similarity=0.089  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...|.+.|..|=....+.|+.+-+.+.+..+|..+.+-.+=.+...+. ..=|.|+-+||+.-|++
T Consensus        83 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k  147 (176)
T 2lhi_A           83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK  147 (176)
T ss_dssp             HHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence            467889999993323469999999999999998886654444444444 56789999999998875

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=80.34  E-value=4.9  Score=30.97  Aligned_cols=68  Identities=7%  Similarity=0.056  Sum_probs=51.7

Q ss_pred             CCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHc----CCCCCCHHHH----HHHHhhCccccccccHHHHHhhhhh
Q 030467           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDPQDIVML----VVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL----gv~~ed~~~L----~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      .....+..+|..|-......|+.+-+..++..+    |..+.+-.+-    .+...+....-|.|+.+||+..|..
T Consensus       101 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~  176 (272)
T 2be4_A          101 DNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILAL  176 (272)
T ss_dssp             CCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCC
T ss_pred             ccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhh
Confidence            456789999999944344699999999999988    8777544332    1455667778899999999998865

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=80.14  E-value=2.7  Score=30.46  Aligned_cols=65  Identities=6%  Similarity=0.017  Sum_probs=41.3

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcC----------CCCCCHHHHH--HHHhhCccccccccHHHHHhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQ----------VDPQDIVMLV--VSWHMKAATMCEFSKQEFIGGL  119 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLg----------v~~ed~~~L~--la~~l~a~~~g~~tr~eF~~g~  119 (177)
                      ....+..+|..|-......|+.+-+.+.+..++          ++++++.-++  +-..+....-|.|+.+||+..|
T Consensus        66 ~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~  142 (143)
T 3a4u_B           66 PQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL  142 (143)
T ss_dssp             HHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred             HHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence            356788999999332335899999999998884          3333333322  1145566778899999998755

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=80.07  E-value=8.5  Score=28.78  Aligned_cols=143  Identities=13%  Similarity=0.091  Sum_probs=76.3

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCC-----CCccccchhhccccCCCCcCCHHHHHHHHHHhcCCCCCccCHHHHHHHH
Q 030467            9 RDKLQQFVSITGASEKAALQALKASD-----WHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLC   83 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~-----w~le~A~~~ff~~~~~~~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~   83 (177)
                      .+.+.+....|+.++.....+-+...     -+=-...+.|..-...+   ......++|..+-....+.|+.+-...++
T Consensus        11 ~~~~~~l~~~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~~lg---~~~~~~~l~~~~d~~~~g~i~~~EF~~~~   87 (208)
T 2ct9_A           11 DEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELA---INPLGDRIINAFFSEGEDQVNFRGFMRTL   87 (208)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCHHHH---TSTTHHHHHHTTSCTTCSCEEHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHcC---CCCcHHHHHHHHcCCCCCcCcHHHHHHHH
Confidence            45677788888888777555433311     00001112221110000   01123567777733334589999888888


Q ss_pred             hHcCCC-CC--------------CHHHHHHHH-hhCccccccccHHHHHhhhhhc-CCC-cHHHHHHHHHHHHHHccC--
Q 030467           84 NDLQVD-PQ--------------DIVMLVVSW-HMKAATMCEFSKQEFIGGLQSL-GID-SLDKFRERISFMRAELKD--  143 (177)
Q Consensus        84 edLgv~-~e--------------d~~~L~la~-~l~a~~~g~~tr~eF~~g~~~l-~~d-sl~~lk~~l~~l~~~l~~--  143 (177)
                      ..+.-. ..              ....+.-++ .+-...-|.||++||...+..+ |.. |-+.++..+..+-..+..  
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~  167 (208)
T 2ct9_A           88 AHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDG  167 (208)
T ss_dssp             HTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSS
T ss_pred             HhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            765421 11              233344343 4556778899999999999886 643 555555554444455521  


Q ss_pred             hh--HHHHHHHHH
Q 030467          144 EQ--KFREIYNFA  154 (177)
Q Consensus       144 ~~--~Fk~iY~ft  154 (177)
                      +.  .|.+|..+.
T Consensus       168 dG~Is~~EF~~~~  180 (208)
T 2ct9_A          168 DSAISFTEFVKVL  180 (208)
T ss_dssp             SSSEEHHHHHHTT
T ss_pred             CCcCcHHHHHHHH
Confidence            12  266666553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	177
d1v92a_	46	a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-	1e-09

>d1v92a_ a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 46

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TAP-C domain-like
domain: NSFL1 (p97 ATPase) cofactor p47, UBA-like domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.3 bits (118), Expect = 1e-09
 Identities = 15/42 (35%), Positives = 26/42 (61%)

Query: 4  LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45
          ++   +D L++FV++TGA E  A   L+++ W L+ A   FY
Sbjct: 1  MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFY 42

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	177
d1v92a_	46	NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {	99.54
d1oaia_	59	FG-binding, C-terminal domain of TAP {Human (Homo	98.25
d2g3qa1	43	Endocytic protein Ede1, YBL047C {Saccharomyces cer	97.28
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	96.77
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	96.7
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	96.32
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	96.26
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	96.2
d1xb2b1	56	Elongation factor Ts (EF-Ts), N-terminal domain {C	96.15
d1oqya1	41	DNA repair protein Hhr23a {Human (Homo sapiens) [T	96.12
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	95.97
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	95.85
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	95.82
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	95.81
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	95.72
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	95.38
d1aipc1	52	Elongation factor Ts (EF-Ts), N-terminal domain {T	95.38
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	95.35
d1wj7a1	91	Ubiquitin-associated protein 2-like Ubap2l {Mouse	95.23
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	95.21
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	95.02
d1efub3	54	Elongation factor Ts (EF-Ts), N-terminal domain {E	94.78
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	94.76
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	94.69
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	94.68
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	94.63
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	94.31
d1wgna_	63	Ubiquitin-associated protein 1, UBAP1 {Human (Homo	94.3
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	94.2
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	93.84
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	93.76
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	93.75
d1wiva_	73	Ubiquitin isopeptidase T {Thale cress (Arabidopsis	93.72
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	93.7
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	93.53
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	93.41
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	93.38
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	93.23
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	92.8
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	92.7
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	92.61
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	92.51
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	92.48
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	92.46
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	92.46
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	92.31
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	92.09
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	91.99
d1olma1	75	Supernatant protein factor (SPF), N-terminal domai	91.99
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	91.97
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	91.65
d1vg5a_	73	Rhomboid family protein At3g58460 {Thale cress (Ar	91.56
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	91.23
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	91.11
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	91.06
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	90.95
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	90.88
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	90.87
d1wjia_	63	Tudor domain containing protein 3, TDRD3 {Human (H	90.77
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	90.66
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	90.37
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	90.36
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	89.72
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	89.61
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	89.57
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	89.53
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	89.48
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	89.17
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	88.76
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	88.68
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	88.53
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	88.49
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	88.19
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	88.19
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	87.88
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	87.7
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	87.5
d1vdla_	80	Ubiquitin carboxyl-terminal hydrolase 25 {Mouse (M	87.21
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	86.93
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	86.54
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	86.45
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	86.43
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	86.3
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	85.9
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	85.52
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	85.08
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	84.36
d1auaa1	93	N-terminal domain of phosphatidylinositol transfer	83.93
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	83.05
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	82.83
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	81.19

>d1v92a_ a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TAP-C domain-like
domain: NSFL1 (p97 ATPase) cofactor p47, UBA-like domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.54  E-value=1.5e-15  Score=94.90  Aligned_cols=45  Identities=33%  Similarity=0.620  Sum_probs=42.3

Q ss_pred             CCccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         4 l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      |+++|+++|.+|++|||+++.+|++||+.++|||+.||+.||++.
T Consensus         1 ma~~~~~lI~qF~~iTg~~~~~A~~~Le~~~w~Le~Ai~~yfe~g   45 (46)
T d1v92a_           1 MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDG   45 (46)
T ss_dssp             CTTHHHHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred             CCccHHHHHHHHHHHHCcCHHHHHHHHHHcCCcHHHHHHHHHhcC
Confidence            467899999999999999999999999999999999999999863

>d1oaia_ a.5.2.3 (A:) FG-binding, C-terminal domain of TAP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TAP-C domain-like
domain: FG-binding, C-terminal domain of TAP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=3.6e-07  Score=58.87  Aligned_cols=43  Identities=21%  Similarity=0.408  Sum_probs=41.2

Q ss_pred             CCCccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhc
Q 030467            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (177)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff   45 (177)
                      .|++.|.++|.+|...||.+..-++.+|+.++||++.|+..|=
T Consensus         2 ~ls~~Qq~mv~~~s~~T~mn~e~s~~cLe~~~Wd~~~A~~~F~   44 (59)
T d1oaia_           2 TLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFT   44 (59)
T ss_dssp             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence            4889999999999999999999999999999999999999995

>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Endocytic protein Ede1, YBL047C
species: Saccharomyces cerevisiae [TaxId: 4932]

Probab=97.28  E-value=7.6e-05  Score=44.35  Aligned_cols=37  Identities=24%  Similarity=0.455  Sum_probs=31.2

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcc
Q 030467            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS   46 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~   46 (177)
                      ..+|++.++ .|-++..|+..|++++||++.|+|.-.+
T Consensus         5 ~~ai~eL~~-MGF~e~~A~~AL~k~~wnleaAtN~LLd   41 (43)
T d2g3qa1           5 SLAVEELSG-MGFTEEEAHNALEKCNWDLEAATNFLLD   41 (43)
T ss_dssp             HHHHHHHHT-TTSCHHHHHHHHHHHTSCHHHHHHHHHT
T ss_pred             HHHHHHHHh-cCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence            456788776 4889999999999999999999987544

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=96.77  E-value=0.0038  Score=40.24  Aligned_cols=69  Identities=6%  Similarity=0.032  Sum_probs=60.3

Q ss_pred             CCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .....|.++|..|=....+.|+.+-+.+++..||+.+.+-.+--+-..+....-|.|+-+||++-|+.+
T Consensus         6 ~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~~   74 (75)
T d1jc2a_           6 KSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV   74 (75)
T ss_dssp             CCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHTC
T ss_pred             CcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence            456789999999944445799999999999999999988888888888898999999999999988765

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.70  E-value=0.0033  Score=39.50  Aligned_cols=65  Identities=6%  Similarity=0.091  Sum_probs=55.6

Q ss_pred             HHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        58 ~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .+.++|+.|=....+.|+.+-+...+..+|..+.+-.+-.+-..+....-|.|+.+||+..|+++
T Consensus         2 ~~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~~   66 (67)
T d1tiza_           2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEKM   66 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHTC
T ss_pred             hHHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHHh
Confidence            35688999944345799999999999999999988888888888888889999999999998764

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=96.32  E-value=0.0092  Score=38.83  Aligned_cols=68  Identities=7%  Similarity=0.081  Sum_probs=57.8

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ....|.++|..|=....+.|+.+-+...+..+|..+.+-.+-.+-..+....=|.|+-+||+.-|+.+
T Consensus        13 ~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~~   80 (81)
T d1fi5a_          13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV   80 (81)
T ss_dssp             CHHHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSCC
T ss_pred             CHHHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhc
Confidence            46789999999954445799999999999999999977777777777888889999999999988754

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=96.26  E-value=0.012  Score=37.68  Aligned_cols=68  Identities=10%  Similarity=0.154  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ...|.++|..|=......|+.+-+.+.+..+|..+.+..+-.+-..+....-|.|+-+||++-|++.+
T Consensus         8 ~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~~   75 (77)
T d1oqpa_           8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS   75 (77)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHccC
Confidence            46799999999544456999999999999999999887777777788888899999999999988743

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.20  E-value=0.008  Score=38.52  Aligned_cols=65  Identities=9%  Similarity=0.148  Sum_probs=55.8

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ..+.++|..|=......|+++-+...+..+|+.|.+-.+--+-..+....-|.|+.+||+.-|.+
T Consensus        10 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~   74 (77)
T d1f54a_          10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR   74 (77)
T ss_dssp             HHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred             HHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            56777899984444579999999999999999999888888888888899999999999987754

>d1xb2b1 a.5.2.2 (B:56-111) Elongation factor Ts (EF-Ts), N-terminal domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TS-N domain
domain: Elongation factor Ts (EF-Ts), N-terminal domain
species: Cow (Bos taurus), mitochondrial [TaxId: 9913]

Probab=96.15  E-value=0.0024  Score=39.96  Aligned_cols=39  Identities=23%  Similarity=0.157  Sum_probs=35.3

Q ss_pred             ccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhh
Q 030467            6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVF   44 (177)
Q Consensus         6 ~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~f   44 (177)
                      ....++|.+.++.||+.-..+...|+.+|||++.|++--
T Consensus         2 a~s~~lvk~LRe~Tga~~~dcKkAL~e~~gD~ekA~e~L   40 (56)
T d1xb2b1           2 ASSKELLMKLRRKTGYSFINCKKALETCGGDLKQAESWL   40 (56)
T ss_dssp             HHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             cccHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence            455789999999999999999999999999999998754

>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: DNA repair protein Hhr23a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.0025  Score=37.36  Aligned_cols=38  Identities=21%  Similarity=0.236  Sum_probs=33.0

Q ss_pred             cHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhc
Q 030467            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (177)
Q Consensus         7 ~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff   45 (177)
                      +-.++|.+.++ .|-++..|++.|++++||++.|++--|
T Consensus         3 ~~e~~i~~L~~-MGF~~~~a~~AL~~~~~N~e~A~~~Ll   40 (41)
T d1oqya1           3 EYETMLTEIMS-MGYERERVVAALRASYNNPHRAVEYLL   40 (41)
T ss_dssp             THHHHHHHHHT-TTCCSHHHHHHHHHSCSSTTHHHHTTT
T ss_pred             hHHHHHHHHHH-cCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence            44678899888 699999999999999999999998543

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.97  E-value=0.0089  Score=38.32  Aligned_cols=68  Identities=10%  Similarity=0.089  Sum_probs=53.1

Q ss_pred             CHHHHHHHHHHhcCC--CCCccCHHHHHHHHhHcCCCC--CCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDP--YLDMILVDGITLLCNDLQVDP--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~--~~d~I~~dG~~~~~edLgv~~--ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ++..|.++|+.|...  +.+.|+.+-+.+.+..||..+  ++..+--+-..+....-|.|+-+||+.-|.++
T Consensus         3 s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~   74 (76)
T d1qx2a_           3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence            467899999999532  236899999999999998765  33344445666778889999999999988764

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=95.85  E-value=0.017  Score=36.55  Aligned_cols=65  Identities=11%  Similarity=0.129  Sum_probs=55.4

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ..+.++|+.|=......|+.+-+...+..+|+.+++-.+--+...+....-|.|+-+||+.-|.+
T Consensus         8 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~   72 (73)
T d2pq3a1           8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR   72 (73)
T ss_dssp             HHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            46777899996555579999999999999999998877777778888889999999999987753

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=95.82  E-value=0.018  Score=37.31  Aligned_cols=66  Identities=11%  Similarity=-0.031  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .+.+.++|+.|=...+..|+.+=+.+.+..|| .|.+-.+--+--.+....-|.|+.+||+..|+..
T Consensus         5 ~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~   70 (81)
T d2opoa1           5 IADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   70 (81)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHC
Confidence            46788999999554557999999999999999 5766667777788888899999999999987764

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.81  E-value=0.019  Score=35.63  Aligned_cols=63  Identities=10%  Similarity=0.061  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGG  118 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g  118 (177)
                      ...|.++|..|=......|+.+-+.+.+..||..+.+-.+-.+-..+....-|.|+-+||+.-
T Consensus         2 eeel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~   64 (65)
T d1fw4a_           2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM   64 (65)
T ss_dssp             CHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHH
Confidence            357889999994434479999999999999999998888888888888888999999999863

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=95.72  E-value=0.093  Score=36.50  Aligned_cols=118  Identities=8%  Similarity=0.119  Sum_probs=76.1

Q ss_pred             CCccHHHHHHH-HHHh----hC-CCHHHHHHHHHhCCCCccc-cchhhccccCC---------------CCcCCHHHHHH
Q 030467            4 LSRSNRDKLQQ-FVSI----TG-ASEKAALQALKASDWHLEG-AFDVFYSQPQS---------------KSLTDTRHLEE   61 (177)
Q Consensus         4 l~~~q~~~i~~-F~~~----T~-~s~~~A~~~L~~~~w~le~-A~~~ff~~~~~---------------~~~~~~~~l~~   61 (177)
                      |++.|.+.+++ |..+    +| .+...-...|+..++++.. -+..++....+               ........|.+
T Consensus         1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~   80 (142)
T d1wdcb_           1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDKLSGTDSEETIRN   80 (142)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHTTSSSCCCHHHHHHHHHHHTCSCCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHHhccCccccccccccccccccccchhhhHHH
Confidence            56666666654 4433    22 2566667777777776532 24555543321               11233577888


Q ss_pred             HHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           62 LYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        62 lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .|..|=......|+.+=+.+.|..+|..+.+-.+--+...+... -|.|+-+||++-|+.-
T Consensus        81 aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~~  140 (142)
T d1wdcb_          81 AFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS  140 (142)
T ss_dssp             HHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred             hhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHhcC
Confidence            99998333346999999999999999887665554555555544 3899999999888753

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=95.38  E-value=0.042  Score=35.45  Aligned_cols=65  Identities=8%  Similarity=0.050  Sum_probs=54.3

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ..+.+.|..|=....+.|+.+=+.+.+..+|+.+.+-.+--+-..+....-|.|+-++|+.-|.+
T Consensus        14 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~   78 (81)
T d1avsa_          14 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   78 (81)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            45667899985444579999999999999999998877777777778888899999999998764

>d1aipc1 a.5.2.2 (C:2-53) Elongation factor Ts (EF-Ts), N-terminal domain {Thermus thermophilus [TaxId: 274]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TS-N domain
domain: Elongation factor Ts (EF-Ts), N-terminal domain
species: Thermus thermophilus [TaxId: 274]

Probab=95.38  E-value=0.0079  Score=36.95  Aligned_cols=37  Identities=22%  Similarity=0.384  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhh
Q 030467            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVF   44 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~f   44 (177)
                      +-+.|.+.++.||++-..+...|+.+|+|++.|++--
T Consensus         2 ~~elvK~LR~~Tga~~~dcKkAL~e~~gD~ekA~e~L   38 (52)
T d1aipc1           2 QMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLL   38 (52)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence            4578999999999999999999999999999998754

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=95.35  E-value=0.019  Score=36.07  Aligned_cols=65  Identities=9%  Similarity=0.108  Sum_probs=54.2

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCC-CCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~-ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ..|.++|..|-.+..+.|+.+-+.+.+..+|..| .+-.+--+-..+....-|.|+-+||+.-|++
T Consensus         2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r   67 (68)
T d1c7va_           2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK   67 (68)
T ss_dssp             HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            4688999999655557999999999999999986 6666666677888899999999999987764

>d1wj7a1 a.5.2.1 (A:8-98) Ubiquitin-associated protein 2-like Ubap2l {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin-associated protein 2-like Ubap2l
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.23  E-value=0.0081  Score=40.88  Aligned_cols=42  Identities=21%  Similarity=0.376  Sum_probs=38.2

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccccC
Q 030467            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~   49 (177)
                      =++.|.+.+++||.|+..|.-.|-.++.+++.||+.-++..+
T Consensus        32 i~~kVkql~e~T~rsede~~~ALhDcn~D~~~AIn~lLEg~~   73 (91)
T d1wj7a1          32 FEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNP   73 (91)
T ss_dssp             HHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCSS
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHhcCCccHHHHHHHHHhcCC
Confidence            357899999999999999999999999999999999998653

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.21  E-value=0.035  Score=33.90  Aligned_cols=60  Identities=10%  Similarity=0.125  Sum_probs=52.4

Q ss_pred             HHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHh
Q 030467           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIG  117 (177)
Q Consensus        58 ~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~  117 (177)
                      .|.+.|..|=......|+.+-+.+.+..+|..+++-.+-.+...+....-|.|+-+||++
T Consensus         2 el~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             hHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            577889998444457999999999999999999998888888888889999999999985

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=95.02  E-value=0.074  Score=36.18  Aligned_cols=101  Identities=11%  Similarity=0.123  Sum_probs=64.7

Q ss_pred             hhCCCHHHHHHHHHhCCC--CccccchhhccccCCCCcCCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCC---C
Q 030467           18 ITGASEKAALQALKASDW--HLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQ---D   92 (177)
Q Consensus        18 ~T~~s~~~A~~~L~~~~w--~le~A~~~ff~~~~~~~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~e---d   92 (177)
                      +.|.|++.....++...=  .++  ...|+..-.. +......|..+|..|-....+.|+.+-+..++..||.+.+   +
T Consensus         2 ~~gls~~di~~~~~~~~~~gsi~--~~eF~~~~~l-~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~   78 (107)
T d2pvba_           2 FAGLKDADVAAALAACSAADSFK--HKEFFAKVGL-ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTD   78 (107)
T ss_dssp             CTTSCHHHHHHHHHHTCSTTCCC--HHHHHHHHTG-GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCH
T ss_pred             CCCCCHHHHHHHHHhccCCCCcC--HHHHHHHHhc-ccCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCH
Confidence            356666665666665431  111  1233332221 3446778999999995444579999999999999976533   2


Q ss_pred             HHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           93 IVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        93 ~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      -.+=.+-..+-...-|.|+.+||+.-|++
T Consensus        79 ~~~~~l~~~~D~d~dG~I~~~EF~~~m~a  107 (107)
T d2pvba_          79 AETKAFLADGDKDGDGMIGVDEFAAMIKA  107 (107)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHcC
Confidence            23333334556678899999999987763

>d1efub3 a.5.2.2 (B:1-54) Elongation factor Ts (EF-Ts), N-terminal domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TS-N domain
domain: Elongation factor Ts (EF-Ts), N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=94.78  E-value=0.013  Score=36.28  Aligned_cols=36  Identities=19%  Similarity=0.209  Sum_probs=32.9

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhh
Q 030467            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVF   44 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~f   44 (177)
                      .+.|.+.++.||+.-..+...|+.++||++.|++--
T Consensus         5 ~~~iK~LR~~Tgag~~dCKkAL~e~~gD~ekA~e~L   40 (54)
T d1efub3           5 ASLVKELRERTGAGMMDCKKALTEANGDIELAIENM   40 (54)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence            467999999999999999999999999999998754

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=94.76  E-value=0.11  Score=35.84  Aligned_cols=84  Identities=12%  Similarity=0.170  Sum_probs=56.9

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCcc--ccccccHHHHHhhhhhcC----CCcHH
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA--TMCEFSKQEFIGGLQSLG----IDSLD  128 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~--~~g~~tr~eF~~g~~~l~----~dsl~  128 (177)
                      ....+.++|..|=......|+.+-+...+..||++|....+--+.......  ..|.++-++|+.-+....    -++..
T Consensus         2 ~~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~   81 (145)
T d2mysc_           2 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFE   81 (145)
T ss_pred             CHHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHH
Confidence            356788899999433346999999999999999998665554444444333  467899999988876532    23444


Q ss_pred             HHHHHHHHHH
Q 030467          129 KFRERISFMR  138 (177)
Q Consensus       129 ~lk~~l~~l~  138 (177)
                      .++.....+.
T Consensus        82 ~l~~aF~~~D   91 (145)
T d2mysc_          82 DFVEGLRVFD   91 (145)
T ss_pred             HHHHHHHHhh
Confidence            4555444443

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=94.69  E-value=0.012  Score=38.88  Aligned_cols=63  Identities=13%  Similarity=0.045  Sum_probs=54.0

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~  119 (177)
                      +.|.++|+.|=......|+++-+.+.+..||+.|.+-.+--+-..+....-|.|+.+||+..|
T Consensus        23 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          23 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             TTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            457889999944345699999999999999999988888888888888889999999999755

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=94.68  E-value=0.097  Score=33.87  Aligned_cols=66  Identities=8%  Similarity=0.007  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHhcCCC-CCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~-~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...+.+.|+.|=..+ ...|++.-+.+.+..||+.|.+-.+--+--.+....-|.|+-+||+.-|.+
T Consensus        14 ~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~   80 (82)
T d1wrka1          14 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   80 (82)
T ss_dssp             HHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            356778899994433 359999999999999999998877777777777777899999999987764

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.63  E-value=0.017  Score=38.61  Aligned_cols=65  Identities=6%  Similarity=0.040  Sum_probs=50.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ..++..++|+.+--+..+.|+.+-+..++..+|++.+.+.  .+-..+-...-|.++++||+..|+-
T Consensus         8 e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l~~~~l~--~i~~~~D~d~dG~l~~~EF~~am~L   72 (95)
T d1c07a_           8 EKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLA--HIWSLCDTKDCGKLSKDQFALAFHL   72 (95)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHH--HHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCCCHHHHH--HHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            4578889999983333469999999999999998755433  3444566778999999999988854

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.31  E-value=0.085  Score=33.70  Aligned_cols=64  Identities=9%  Similarity=0.113  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~  119 (177)
                      ...|.++|..|=....+.|+.+-+.+.|..+|+.+.+..+-.|...+....-|.|+=.+|+.-+
T Consensus        19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          19 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            4678888999844445799999999999999999999999999999999999999999999754

>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin-associated protein 1, UBAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.30  E-value=0.011  Score=37.45  Aligned_cols=45  Identities=27%  Similarity=0.420  Sum_probs=39.2

Q ss_pred             CCCccHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      .+++...+.|.+.+++ |-++..|++-|+.++||+|.|++--|.+.
T Consensus        14 ~~~~~de~~v~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~Lls~~   58 (63)
T d1wgna_          14 MLSPSERQCVETVVNM-GYSYECVLRAMKKKGENIEQILDYLFAHS   58 (63)
T ss_dssp             TCCHHHHHHHHHHHHH-HCCHHHHHHHHHHHCSCHHHHHHHHHHHS
T ss_pred             cCCchhHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            3566677889999884 88999999999999999999999998764

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=94.20  E-value=0.094  Score=36.12  Aligned_cols=66  Identities=11%  Similarity=0.114  Sum_probs=57.0

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      +.|.++|+.|-....+.|+.+-+..++..+|..+.+..+-.+--.+....-|.++-++|+..+...
T Consensus         9 ~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~   74 (146)
T d1exra_           9 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARK   74 (146)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHH
Confidence            467888999955445799999999999999999998888888888899999999999999988653

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=93.84  E-value=0.12  Score=34.70  Aligned_cols=70  Identities=11%  Similarity=0.099  Sum_probs=52.8

Q ss_pred             HHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCCCcHH
Q 030467           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLD  128 (177)
Q Consensus        59 l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~dsl~  128 (177)
                      .+++|+.+=....+.|+.+-+..++..+|..+.+-.+=.+-..+....-|.|+.+||+..+.........
T Consensus         2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~   71 (134)
T d1jfja_           2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLS   71 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSH
T ss_pred             HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence            3678888844344689999999999999998866665556666777788999999999888776544433

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.76  E-value=0.095  Score=35.92  Aligned_cols=68  Identities=6%  Similarity=-0.009  Sum_probs=53.0

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        53 ~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ......+.++|+++-....+.|+.+=+..++...|++.+.+..+  -..+....-|.++++||+..|+=+
T Consensus        18 ~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L~~~~L~~I--w~l~D~d~dG~l~~~EF~~am~Li   85 (110)
T d1iq3a_          18 EEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYI--WELSDADCDGALTLPEFCAAFHLI   85 (110)
T ss_dssp             SSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHH--HHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhccchHHHHHH--HHHhccCCCCeECHHHHHHHHHHH
Confidence            44578899999998433346999999999999999988765543  234567788999999999887643

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.75  E-value=0.17  Score=36.58  Aligned_cols=107  Identities=10%  Similarity=0.134  Sum_probs=74.1

Q ss_pred             cCCHHHHHHHHHHhcCCCC-CccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCC-CcHHHH
Q 030467           53 LTDTRHLEELYNRYKDPYL-DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI-DSLDKF  130 (177)
Q Consensus        53 ~~~~~~l~~lF~~Y~d~~~-d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~-dsl~~l  130 (177)
                      ..+.+.|.+||.+|+...+ ..|+.+-..+++..+|....+..+=.|-..+-...-|.|+-.||+.++..+.- ...+++
T Consensus        17 ~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~   96 (189)
T d1jbaa_          17 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL   96 (189)
T ss_dssp             HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred             ccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHH
Confidence            4467889999999975443 58999999999998888776666667777888888999999999999988653 334445


Q ss_pred             HHHHHHHHHHc---cChhHHHHHHHHHhhhhh
Q 030467          131 RERISFMRAEL---KDEQKFREIYNFAFAWAK  159 (177)
Q Consensus       131 k~~l~~l~~~l---~~~~~Fk~iY~ftF~f~~  159 (177)
                      +....-....=   -+...|..++.-.+....
T Consensus        97 ~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~  128 (189)
T d1jbaa_          97 KWTFKIYDKDRNGCIDRQELLDIVESIYKLKK  128 (189)
T ss_dssp             HHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhccCCCCcccHhHHHHHHHHHHHhhc
Confidence            44443332211   133346666555554433

>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin isopeptidase T
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.72  E-value=0.028  Score=36.49  Aligned_cols=42  Identities=29%  Similarity=0.374  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccccCC
Q 030467            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS   50 (177)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~~   50 (177)
                      ..+.|.+.++ .|-++..|++.|+.+++|++.|++--|+++..
T Consensus        29 d~~~i~~L~~-MGF~~~~a~~AL~~~~~n~e~Av~~Lls~~~~   70 (73)
T d1wiva_          29 DQSSVDTLLS-FGFAEDVARKALKASGGDIEKATDWVFNNSGP   70 (73)
T ss_dssp             CHHHHHHHHH-HTCCHHHHHHHHHHTTSCHHHHHHHHHHSCCS
T ss_pred             CHHHHHHHHh-cCCCHHHHHHHHHHcCCCHHHHHHHHHcCCCC
Confidence            3567899997 79999999999999999999999999988643

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=93.70  E-value=0.16  Score=34.91  Aligned_cols=118  Identities=10%  Similarity=0.110  Sum_probs=76.1

Q ss_pred             CCCccHHHHHHH-HHHh----hCC-CHHHHHHHHHhCCCCcccc-chhhcc---ccCCCC----------------cCCH
Q 030467            3 KLSRSNRDKLQQ-FVSI----TGA-SEKAALQALKASDWHLEGA-FDVFYS---QPQSKS----------------LTDT   56 (177)
Q Consensus         3 ~l~~~q~~~i~~-F~~~----T~~-s~~~A~~~L~~~~w~le~A-~~~ff~---~~~~~~----------------~~~~   56 (177)
                      +||.+|.+.+++ |..+    +|. |...=..+|...++.+... +..+|.   ....+.                ....
T Consensus         2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~   81 (146)
T d1exra_           2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE   81 (146)
T ss_dssp             CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChH
Confidence            466766655643 5444    222 4555566777766665322 222222   111110                0113


Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ..+.++|+.|-......|+.+-+..++..+|..+.+..+-.+...+....=|.|+.+||++-+.
T Consensus        82 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~  145 (146)
T d1exra_          82 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV  145 (146)
T ss_dssp             HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence            4677888888443446899999999999999888877778888888888889999999987653

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.53  E-value=0.09  Score=33.72  Aligned_cols=69  Identities=10%  Similarity=0.083  Sum_probs=52.0

Q ss_pred             CCHHHHHHHHHHhcCCC--CCccCHHHHHHHHhHc--CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           54 TDTRHLEELYNRYKDPY--LDMILVDGITLLCNDL--QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~~--~d~I~~dG~~~~~edL--gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .....|.++|.+|.+.+  .+.|+.+-+.+++..+  +..++.-.+=.+...+..-.=|.|.=+||+.-|.++
T Consensus         4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l   76 (78)
T d1cb1a_           4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            35789999999997543  3689999999999887  443332223345666778888999999999888765

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=93.41  E-value=0.18  Score=34.28  Aligned_cols=68  Identities=9%  Similarity=0.058  Sum_probs=52.1

Q ss_pred             CCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHc---CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL---gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      .....|.++|..|=....+.|+.+-+.+++..|   |..+.+-.+=.+-..+-...-|.|+.+||+.-|++
T Consensus        38 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d5pala_          38 KTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             CCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            356789999999954445799999999988877   55566555555556667788899999999988764

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.38  E-value=0.041  Score=36.80  Aligned_cols=65  Identities=9%  Similarity=0.079  Sum_probs=50.5

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ......++|+.+- +..+.|+.+-+..++...|++.+++.  .+-..+....-|.++++||+..++-+
T Consensus         8 e~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~gl~~~~L~--~Iw~~~D~~~dG~l~~~EF~~a~~Li   72 (95)
T d2jxca1           8 DKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILG--RVWELSDIDHDGMLDRDEFAVAMFLV   72 (95)
T ss_dssp             HHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSSCCHHHHH--HHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcCCCHHHHH--HHHHHhcCCCCCeEcHHHHHHHHHHH
Confidence            4567889999985 44469999999999999999765332  34445667889999999998777653

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=93.23  E-value=0.17  Score=33.55  Aligned_cols=67  Identities=9%  Similarity=0.026  Sum_probs=51.4

Q ss_pred             HHHHHHHHHhcCCCC--CccCHHHHHHHHhHc-----CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           57 RHLEELYNRYKDPYL--DMILVDGITLLCNDL-----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~--d~I~~dG~~~~~edL-----gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ..|..+|.+|.+.++  +.|+.+.+.+++...     +-.+.+-.+=.+...+....=|.|+-+||+.-|..+.
T Consensus         9 ~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l~   82 (93)
T d3c1va1           9 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIA   82 (93)
T ss_dssp             HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Confidence            467789999987543  479999999999874     3334444455566778888899999999999887763

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.80  E-value=0.14  Score=34.74  Aligned_cols=68  Identities=6%  Similarity=0.046  Sum_probs=54.5

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCC---CCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQV---DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        53 ~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv---~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ......+.++|..|-....+.|+.+-+.+++..|+.   .+++-.+-.+...+-.-.=|.|+.+||+..|+
T Consensus        37 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (108)
T d1rroa_          37 KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             cCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence            446778999999996655679999999999998854   35555666677777888899999999998775

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.70  E-value=0.18  Score=34.14  Aligned_cols=66  Identities=9%  Similarity=0.169  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...|.++|+.|=....+.|.++-+..++..+|..+....+..+.-.+.....|.++.++|+..+..
T Consensus         5 ~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~   70 (141)
T d2obha1           5 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQ   70 (141)
T ss_dssp             HHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHH
Confidence            357889999993333469999999999999999999888888888888888999999999988765

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.61  E-value=0.31  Score=32.91  Aligned_cols=62  Identities=15%  Similarity=0.132  Sum_probs=44.4

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGG  118 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g  118 (177)
                      ..|..+|..|-....+.|+...+...|..+|+...+-.+-.+...+....=|.|+.+||++-
T Consensus        79 ~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~  140 (141)
T d2obha1          79 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI  140 (141)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHH
T ss_pred             HHHHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHHHHHHh
Confidence            45666777775444467888888888888887777777777777777777778888887753

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=92.51  E-value=0.58  Score=31.52  Aligned_cols=68  Identities=7%  Similarity=0.056  Sum_probs=51.2

Q ss_pred             CCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHc---CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL---gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      .....+.++|..|=......|+.+-+..++..|   |..+.+-.+=.+...+-...=|.|+.+||+.-|.+
T Consensus        38 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d1pvaa_          38 MSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE  108 (109)
T ss_dssp             SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             CCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence            356788899999954444699999999888887   55666555555556667778899999999987753

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.48  E-value=0.088  Score=35.32  Aligned_cols=63  Identities=17%  Similarity=0.185  Sum_probs=47.2

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHH-hhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~-~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..-.++|+.+-....+.|+.+=+.+++...|++.+   .|--.| ......-|.++++||+.+|+-+
T Consensus        11 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~L~~~---~L~~i~~~~D~d~dG~L~~~EF~~am~Li   74 (99)
T d1qjta_          11 PVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDL---ILGKIWDLADTDGKGVLSKQEFFVALRLV   74 (99)
T ss_dssp             THHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHH---HHHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCcHH---HHHHHHHHHcCCCCCccCHHHHHHHHHHH
Confidence            45667898884434468999999999999998654   333334 4456778999999999998753

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.46  E-value=0.085  Score=34.71  Aligned_cols=65  Identities=5%  Similarity=-0.007  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .+...++|+.+-....+.|+.+-+..++...|++.+.+.  .+-..+-...-|.++++||+.+|+-+
T Consensus         8 ~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l~~~~l~--~i~~~~D~d~dG~l~~~EF~~a~~li   72 (92)
T d1fi6a_           8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELS--HIWELSDFDKDGALTLDEFCAAFHLV   72 (92)
T ss_dssp             HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHH--HHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCcccchhHHHHHHHHHHccCCHHHHH--HHHHHhCCCCCCeecHHHHHHHHHHH
Confidence            466788999884334469999999999999998654322  23335667788999999999877653

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=92.46  E-value=0.17  Score=36.72  Aligned_cols=67  Identities=13%  Similarity=-0.006  Sum_probs=56.2

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ..++|.++|..+-....+.|+.+=+.+.+..+|+.+.+..+-.|...+....-|.|+.++|+..+..
T Consensus        16 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~   82 (182)
T d1y1xa_          16 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF   82 (182)
T ss_dssp             TTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhcccccccccccccccccccccc
Confidence            4578999999983323469999999999999999998888888888888888999999999887653

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=92.31  E-value=0.26  Score=33.18  Aligned_cols=68  Identities=7%  Similarity=0.026  Sum_probs=53.4

Q ss_pred             CCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCC---CCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVD---PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~---~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      .....+..+|+.|-....+.|+.+.+.+++..|+..   +.+-.+-.+-..+....=|.|+.+||+.-|++
T Consensus        38 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~  108 (109)
T d1rwya_          38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            356788999999954445799999999999998764   44455556666777889999999999988764

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=92.09  E-value=0.27  Score=34.80  Aligned_cols=66  Identities=6%  Similarity=-0.093  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...+..+|..|=....+.|+.+-+.++++.+|+...+-.+-.+-..+-...=|.|+.+||++-+..
T Consensus       104 ~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~  169 (187)
T d1uhka1         104 RIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG  169 (187)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence            355778888883333469999999999999999887666667777888888999999999986654

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=91.99  E-value=0.23  Score=35.01  Aligned_cols=65  Identities=9%  Similarity=0.140  Sum_probs=51.4

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+..+|..|=......|+.+-+.++|..+|++.+++..+.  ..+-...-|.|+.+||+..|..+
T Consensus       104 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l~~~~~~~~f--~~~D~d~dG~i~~~EF~~~~~~f  168 (185)
T d2sasa_         104 QNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVY--NVITDGGKVTFDLNRYKELYYRL  168 (185)
T ss_dssp             HHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHH--HHHHTTTTSCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCccCCHHHHHHHHHHcCCCHHHHHHHH--HHcCCCCCCCCcHHHHHHHHHHH
Confidence            456888999984333469999999999999999988876543  44556678999999999988764

>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Supernatant protein factor (SPF), N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.99  E-value=0.093  Score=33.53  Aligned_cols=43  Identities=19%  Similarity=0.269  Sum_probs=36.9

Q ss_pred             CCCccHHHHHHHHHHhhC--------CCHHHHHHHHHhCCCCccccchhhc
Q 030467            3 KLSRSNRDKLQQFVSITG--------ASEKAALQALKASDWHLEGAFDVFY   45 (177)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~--------~s~~~A~~~L~~~~w~le~A~~~ff   45 (177)
                      .||+.|.+.|.+|.+..+        .+.....+||.+.+||++.|...+-
T Consensus         7 elt~~q~~~l~elr~~l~~~~~~~~~~dd~~LlRFLrAr~fdv~kA~~ml~   57 (75)
T d1olma1           7 DLSPRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLR   57 (75)
T ss_dssp             BCCHHHHHHHHHHHHHHGGGGGGSSCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHCCCCHHHHHHHHH
Confidence            489999999999998753        3578899999999999999988773

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=91.97  E-value=0.19  Score=33.03  Aligned_cols=67  Identities=10%  Similarity=-0.022  Sum_probs=52.9

Q ss_pred             HHHHHHHHHhcCCCC--CccCHHHHHHHHhHcCCC----C-CCHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           57 RHLEELYNRYKDPYL--DMILVDGITLLCNDLQVD----P-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~--d~I~~dG~~~~~edLgv~----~-ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ..|.++|.+|.+.++  +.|+.+-+.+.+..++..    + .+-.+-.+...+..-.=|.|+-+||+.-|..+-
T Consensus         9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l~   82 (93)
T d1zfsa1           9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT   82 (93)
T ss_dssp             HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            578889999976543  589999999999988642    2 344555667788899999999999999887753

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=91.65  E-value=0.25  Score=35.22  Aligned_cols=66  Identities=8%  Similarity=0.028  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...+..+|..|=....+.|+.+-+.++|..+|+.+.+-.+-.+-..+-...=|.|+.+||+.-+..
T Consensus       106 ~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~  171 (189)
T d1qv0a_         106 REWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG  171 (189)
T ss_dssp             HHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            345667888874333469999999999999999887766666667777888899999999987654

>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Rhomboid family protein At3g58460
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.56  E-value=0.079  Score=34.23  Aligned_cols=42  Identities=26%  Similarity=0.381  Sum_probs=36.0

Q ss_pred             cHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhccccC
Q 030467            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (177)
Q Consensus         7 ~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~   49 (177)
                      ..++.|++.+++ |-++..|++.|+.+++|+|.|++--|++..
T Consensus        28 ~~ee~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~Ll~~~~   69 (73)
T d1vg5a_          28 ASEEQIQKLVAM-GFDRTQVEVALAAADDDLTVAVEILMSQSG   69 (73)
T ss_dssp             CCHHHHHHHHTT-TCCHHHHHHHHHHHTSCHHHHHHHHHTCSC
T ss_pred             cCHHHHHHHHHh-CCCHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence            346779998774 889999999999999999999999887753

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.23  E-value=0.38  Score=34.65  Aligned_cols=70  Identities=14%  Similarity=0.125  Sum_probs=53.8

Q ss_pred             CcCCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHH-HHHHHhhCccccccccHHHHHhhhhh
Q 030467           52 SLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVM-LVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        52 ~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~-L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      +.++...|..+|+.+-......|+.+=+.+.+..++..+.+... -.+-..+....-|.|+.+||+.-|..
T Consensus        14 ~~~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~   84 (181)
T d1hqva_          14 ALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY   84 (181)
T ss_dssp             CCSCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhh
Confidence            45578999999999943334699999999999999987644333 34444567778899999999987764

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=91.11  E-value=0.16  Score=35.42  Aligned_cols=120  Identities=9%  Similarity=0.093  Sum_probs=77.2

Q ss_pred             CCCCccHHHHHHH-HHHh-----hC-CCHHHHHHHHHhCCCCccccc-----hhhccccCCC------------------
Q 030467            2 HKLSRSNRDKLQQ-FVSI-----TG-ASEKAALQALKASDWHLEGAF-----DVFYSQPQSK------------------   51 (177)
Q Consensus         2 ~~l~~~q~~~i~~-F~~~-----T~-~s~~~A~~~L~~~~w~le~A~-----~~ff~~~~~~------------------   51 (177)
                      .+||+.|.+.|++ |..+     +| .+...-..+|+..+-++...-     ..+..+..+.                  
T Consensus         6 ~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (156)
T d1dtla_           6 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS   85 (156)
T ss_dssp             GGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC---
T ss_pred             HHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhcccccc
Confidence            4688888877765 6532     44 367777788888775543221     1111111110                  


Q ss_pred             CcCCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           52 SLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        52 ~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      .......|..+|..|-....+.|+.+-+.+++..+|...++-.+--+...+....=|.|+.+||++-|+.
T Consensus        86 ~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~g  155 (156)
T d1dtla_          86 KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG  155 (156)
T ss_dssp             --CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred             cccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHcC
Confidence            1123456778888885444468999999999999998887777666777777777789999999876653

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.06  E-value=0.87  Score=31.02  Aligned_cols=67  Identities=10%  Similarity=0.123  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHhcCCC-CCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           56 TRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~-~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      -..|.++|++| |++ .+.|+.+=+...+..+|..|....+.-+.+.......+.++.++|+..+....
T Consensus         9 i~~l~~~F~~~-D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (146)
T d1lkja_           9 IAEFKEAFALF-DKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQL   76 (146)
T ss_dssp             HHHHHHHHHHH-CCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHH-CCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhh
Confidence            35677789998 444 35899999999999999999888888888888888888888888888876643

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.95  E-value=0.27  Score=33.90  Aligned_cols=66  Identities=11%  Similarity=0.132  Sum_probs=54.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ....|.++|..|-....+.|+++-+.+++..+|..+.+-.+-.+...+....=|.|+-+||++.+.
T Consensus        79 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~  144 (146)
T d1m45a_          79 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL  144 (146)
T ss_dssp             CTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             hHHHHHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence            456799999999544457999999999999999988777677777778887889999999998764

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=90.88  E-value=0.34  Score=33.90  Aligned_cols=65  Identities=12%  Similarity=0.003  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+..+|..+=......|+.+-+.++|..+|++++++..+  --.+-...=|.|+.+||+..|...
T Consensus        93 ~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~--f~~~D~d~dG~Is~~Ef~~~~~~f  157 (174)
T d2scpa_          93 EGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPAS--FDAIDTNNDGLLSLEEFVIAGSDF  157 (174)
T ss_dssp             HTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCGGGHHHH--HHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCccccCCHHHHHHHHHHHhhhhHHHHHH--HhhcCCCCCCcEeHHHHHHHHHHH
Confidence            34577788888444446999999999999999988876554  456677788999999999998764

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=90.87  E-value=0.21  Score=34.72  Aligned_cols=67  Identities=9%  Similarity=0.055  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCC
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~  124 (177)
                      ...+..+|..|=......|+.+=+..+|..+|++++.+..  +-..+-...=|.++.+||+..|+...-
T Consensus       101 ~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~~~~~~~~--~f~~~D~d~dG~i~~~Ef~~~~~~~~~  167 (176)
T d1nyaa_         101 GPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAE--AFNQVDTNGNGELSLDELLTAVRDFHF  167 (176)
T ss_dssp             HHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHH--HHHHHCTTCSSEEEHHHHHHHHSCCSS
T ss_pred             HHHHHHHHHHHccCCChhhhHHHHHHHHHhcCCcHHHHHH--HHHHHCCCCCCcEeHHHHHHHHHHHhc
Confidence            4567889998832234599999999999999998766543  445567778899999999999988643

>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Tudor domain containing protein 3, TDRD3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.77  E-value=0.075  Score=33.30  Aligned_cols=41  Identities=27%  Similarity=0.401  Sum_probs=36.1

Q ss_pred             cHHHHHHHHHHhhCCCHHHHHHHHHhCCCCccccchhhcccc
Q 030467            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         7 ~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      ...+.|++.+++ |-++..|++.|..+++|++.|++--|+++
T Consensus         8 ~d~~~v~~L~~M-GF~~~~a~~AL~~~~~~~e~A~~wL~~~~   48 (63)
T d1wjia_           8 VDEKALKHITEM-GFSKEASRQALMDNGNNLEAALNVLLTSN   48 (63)
T ss_dssp             SCHHHHHHHHTT-TCCHHHHHHHHHHTTSCHHHHHHHHHHHS
T ss_pred             cCHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            346778998886 99999999999999999999999988775

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.66  E-value=0.9  Score=32.50  Aligned_cols=65  Identities=11%  Similarity=0.139  Sum_probs=50.9

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ..+...|..|-......|..+-+.+.+...|....+-.+-.+...+....-|.|+.++|+..+..
T Consensus        86 ~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~  150 (181)
T d1hqva_          86 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV  150 (181)
T ss_dssp             HHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred             cccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            45566777774434468999999999999999888877777777788788899999999877643

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=90.37  E-value=0.66  Score=32.12  Aligned_cols=119  Identities=10%  Similarity=0.073  Sum_probs=75.7

Q ss_pred             CCCccHHHHH-HHHHHh----hCC-CHHHHHHHHHhCCCCcc-ccchhhccc----cCCC-C-----------------c
Q 030467            3 KLSRSNRDKL-QQFVSI----TGA-SEKAALQALKASDWHLE-GAFDVFYSQ----PQSK-S-----------------L   53 (177)
Q Consensus         3 ~l~~~q~~~i-~~F~~~----T~~-s~~~A~~~L~~~~w~le-~A~~~ff~~----~~~~-~-----------------~   53 (177)
                      .||+.|.+.+ +.|..+    .|. +...-+.+|+..+..+. ..+...+..    ..+. +                 .
T Consensus        13 ~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~   92 (162)
T d1topa_          13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKG   92 (162)
T ss_dssp             HSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhccc
Confidence            3666665544 345555    333 34445677877776653 233333321    1110 0                 0


Q ss_pred             CCHHHHHHHHHHhcCCC-CCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           54 TDTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~~-~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      .....+.++|..| |.+ .+.|..+-+.+++...|..+.+..+--|-..+....=|.|+.+||++-|+.+
T Consensus        93 ~~~~~~~~aF~~~-D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~  161 (162)
T d1topa_          93 KSEEELANCFRIF-DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV  161 (162)
T ss_dssp             HHHHHHHHHHHHH-CTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred             CcHHHHHHHHHHH-CCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHcC
Confidence            1123456678777 443 3689999999999999998887777777778888888999999999877765

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=90.36  E-value=0.31  Score=35.22  Aligned_cols=66  Identities=14%  Similarity=0.054  Sum_probs=55.2

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..|.++|+.+-....+.|+.+-+..++..+|++|.+..+=.+...+.....|.|+.++|+..+...
T Consensus        10 ~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~   75 (182)
T d1s6ia_          10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHL   75 (182)
T ss_dssp             CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhh
Confidence            568899998844344699999999999999999988888888888888889999999999876664

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=89.72  E-value=0.53  Score=32.63  Aligned_cols=77  Identities=13%  Similarity=0.249  Sum_probs=52.3

Q ss_pred             HHHHHHHHHhc--CCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc-C--CCcHHHHH
Q 030467           57 RHLEELYNRYK--DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL-G--IDSLDKFR  131 (177)
Q Consensus        57 ~~l~~lF~~Y~--d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l-~--~dsl~~lk  131 (177)
                      ..+.++|+.|-  +.....|+.+-+...+..||+.|.+-.+-.+.+. -...-|.|+-++|+.-|..+ .  -++...++
T Consensus         7 ~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~~~-~~~~~~~i~~~eFl~~~~~~~~~~~~~~~~l~   85 (152)
T d1wdcc_           7 DDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGT-HKMGEKSLPFEEFLPAYEGLMDCEQGTFADYM   85 (152)
T ss_dssp             HHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTTCC-SSTTSCEECHHHHHHHHHHHTTSCCCCHHHHH
T ss_pred             HHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhhhh-hccccccccccccccccccccccchhHHHhhh
Confidence            45667788773  2233599999999999999999977666555433 33446789999999887654 2  24444444


Q ss_pred             HHH
Q 030467          132 ERI  134 (177)
Q Consensus       132 ~~l  134 (177)
                      ...
T Consensus        86 ~aF   88 (152)
T d1wdcc_          86 EAF   88 (152)
T ss_dssp             HHH
T ss_pred             hhh
Confidence            443

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=89.61  E-value=1.3  Score=30.23  Aligned_cols=81  Identities=10%  Similarity=-0.007  Sum_probs=54.3

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcCC--CcHHHHHHHH
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI--DSLDKFRERI  134 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~--dsl~~lk~~l  134 (177)
                      ..|.+.|+.|-....+.|..+-+...+..||..|....++-.   +-...-|.++-++|+..|....+  ++.+.++...
T Consensus         7 ~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~~~~~---~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~aF   83 (145)
T d2mysb_           7 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDA---MIKEASGPINFTVFLTMFGEKLKGADPEDVIMGAF   83 (145)
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHHHHHH---HHHhccCceeechhhhhhhhcccccchHHHHHHHH
Confidence            456777999944444699999999999999987655444332   22345688999999998876433  2344455555


Q ss_pred             HHHHHH
Q 030467          135 SFMRAE  140 (177)
Q Consensus       135 ~~l~~~  140 (177)
                      ..+...
T Consensus        84 ~~fD~~   89 (145)
T d2mysb_          84 KVLDPD   89 (145)
T ss_pred             Hhhhhc
Confidence            555433

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.57  E-value=0.71  Score=33.14  Aligned_cols=65  Identities=3%  Similarity=-0.064  Sum_probs=48.9

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ...+.++|..|-...++.|+.+-+...+..+|+++.+..+=.|.-...  .-|.++-++|+..+..+
T Consensus        69 ~~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d--~~g~i~~~eFi~~~~~l  133 (165)
T d1k94a_          69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYS--KNGRIFFDDYVACCVKL  133 (165)
T ss_dssp             HHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHC--BTTBCBHHHHHHHHHHH
T ss_pred             cchhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcC--CCCcCcHHHHHHHHHHH
Confidence            466777888885545579999999999999999886654444444443  34899999999988653

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.53  E-value=0.73  Score=33.07  Aligned_cols=63  Identities=3%  Similarity=-0.016  Sum_probs=44.5

Q ss_pred             HHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCC----H-HHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD----I-VMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        59 l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed----~-~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      +-.+|++++++ ...|+.+=+.+.+..+|+++..    + .+-.+.-.+-...-|.++-+||+.-|..+
T Consensus         2 ~~~~F~~~a~~-dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~   69 (165)
T d1k94a_           2 VYTYFSAVAGQ-DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL   69 (165)
T ss_dssp             HHHHHHHHHGG-GTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHhcCC-CCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhcc
Confidence            45789999664 4589999999999999987631    1 12233344567778888888888877654

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=89.48  E-value=0.7  Score=30.63  Aligned_cols=66  Identities=9%  Similarity=-0.029  Sum_probs=49.6

Q ss_pred             HHHHHHHHHhcCCCC--CccCHHHHHHHHhHcCC--CCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYL--DMILVDGITLLCNDLQV--DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~--d~I~~dG~~~~~edLgv--~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..|..+|.+|.+.++  +.|+.+-+.+++..++-  .+++-.+=-+-..+....=|.|.=+||+.-+..+
T Consensus        14 ~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l   83 (98)
T d1yuta1          14 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL   83 (98)
T ss_dssp             HHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            578889999976543  69999999999987643  2333233455667788889999999999887664

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=89.17  E-value=2  Score=29.18  Aligned_cols=66  Identities=3%  Similarity=-0.200  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...|.+.|..|-......|+.+=+.+.+..+|....+-.+-.+.-.+....-|.|+-.+|++-|+.
T Consensus        76 ~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~  141 (145)
T d2mysb_          76 EDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH  141 (145)
T ss_pred             HHHHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhcc
Confidence            456777888774434457888888888888887776666666666666677788888888877654

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=88.76  E-value=2  Score=29.14  Aligned_cols=73  Identities=14%  Similarity=0.189  Sum_probs=50.9

Q ss_pred             HHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc-C-CCcHHHHHHH
Q 030467           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL-G-IDSLDKFRER  133 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l-~-~dsl~~lk~~  133 (177)
                      ..+.++|+.|=......|+.+-+...+..||++|.+-.+-.+-   . ..-|.++-++|+..+... . .++.+.++..
T Consensus         7 ~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~---~-~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~a   81 (142)
T d1wdcb_           7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML---K-EAPGPLNFTMFLSIFSDKLSGTDSEETIRNA   81 (142)
T ss_dssp             HHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHH---T-TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHH---H-hccCccccccccccccccccccchhhhHHHh
Confidence            5677889998333346999999999999999999765543332   2 345789999999987653 2 3344444443

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.68  E-value=0.58  Score=31.99  Aligned_cols=69  Identities=14%  Similarity=0.042  Sum_probs=33.9

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHH-hhCccccccccHHHHHhhhhhcCC
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGI  124 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~-~l~a~~~g~~tr~eF~~g~~~l~~  124 (177)
                      ...+..++..|-......+..+.....+.........-.-+..|+ .+-...-|.|+++||...+..+|.
T Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~  114 (146)
T d1lkja_          45 EAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE  114 (146)
T ss_dssp             HHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC
Confidence            344555555554433345555555555555444443333333333 334455556666666655555553

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=88.53  E-value=0.46  Score=31.16  Aligned_cols=66  Identities=15%  Similarity=0.143  Sum_probs=54.9

Q ss_pred             HHHHHHHHHhcCCCC--CccCHHHHHHHHhH---cCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           57 RHLEELYNRYKDPYL--DMILVDGITLLCND---LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~--d~I~~dG~~~~~ed---Lgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..|..+|.+|.+.++  +.|+..-+.++++.   +|..+++..+-.+-..+..-.=|.|.=+||+.-+..+
T Consensus         9 ~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l   79 (89)
T d1k8ua_           9 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL   79 (89)
T ss_dssp             HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence            457789999987654  47999999999987   7777777778888888888999999999999877765

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=88.49  E-value=0.94  Score=32.43  Aligned_cols=66  Identities=2%  Similarity=-0.072  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...+.+.|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+.-+..
T Consensus        83 ~~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~  148 (182)
T d1y1xa_          83 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF  148 (182)
T ss_dssp             HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             ccccccchhccccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHHH
Confidence            355667788884434469999999999999999988877778888888889999999999987643

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=88.19  E-value=0.67  Score=30.59  Aligned_cols=67  Identities=12%  Similarity=0.113  Sum_probs=53.0

Q ss_pred             HHHHHHHHHhcCCCCC--ccCHHHHHHHHhHc-----CCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhcC
Q 030467           57 RHLEELYNRYKDPYLD--MILVDGITLLCNDL-----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (177)
Q Consensus        57 ~~l~~lF~~Y~d~~~d--~I~~dG~~~~~edL-----gv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~  123 (177)
                      ..|..+|.+|.+.++|  .|+.+.+.+++...     +-..++..+=.+-..+....=|.|+=+||+.-|..+-
T Consensus         9 ~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l~   82 (93)
T d1ksoa_           9 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLC   82 (93)
T ss_dssp             HHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            4677899999877553  79999999999764     3334566677777788888999999999998887763

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.19  E-value=0.73  Score=30.09  Aligned_cols=66  Identities=11%  Similarity=0.170  Sum_probs=45.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCC--CCHHHHHHHHhhCcc----ccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDP--QDIVMLVVSWHMKAA----TMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~--ed~~~L~la~~l~a~----~~g~~tr~eF~~g~~~  121 (177)
                      .++.|..||.+|.+. .+.|+++.+.+|+.+-.=++  +...+.-|-.+....    .-|.+|.++|+.=+..
T Consensus         6 ~R~ei~~if~~ys~~-~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S   77 (94)
T d1qasa1           6 QRAEIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS   77 (94)
T ss_dssp             CCHHHHHHHHHHHTT-SSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHS
T ss_pred             ccHHHHHHHHHHhCC-CCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcC
Confidence            468899999999874 46899999999998765433  323333344444322    2467888988876544

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=87.88  E-value=0.5  Score=32.42  Aligned_cols=67  Identities=10%  Similarity=0.064  Sum_probs=52.2

Q ss_pred             CCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        54 ~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      .....|.+.|..|-....+.|+.+-+.+.+..+|....+-.+-.+...+... =|.|+-+||++-|.+
T Consensus        73 ~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~s  139 (140)
T d1ggwa_          73 GDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMILA  139 (140)
T ss_dssp             CCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHHC
T ss_pred             hHHHHHHHHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHhc
Confidence            3567899999999444446999999999999999877666555566666655 599999999987653

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.70  E-value=1.5  Score=31.37  Aligned_cols=80  Identities=9%  Similarity=-0.014  Sum_probs=45.1

Q ss_pred             CHHHHHHHHHHhcCCC-CCccCHHHHHHHHhHcCCCCCC-HHHHHHHHhhCccccccccHHHHHhhhhhcCC-CcHHHHH
Q 030467           55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI-DSLDKFR  131 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~-~d~I~~dG~~~~~edLgv~~ed-~~~L~la~~l~a~~~g~~tr~eF~~g~~~l~~-dsl~~lk  131 (177)
                      ++..|..||.+|.+.. +..|+.+-..+.+..++..+.+ ..+=.|-..+....-|.|+.+||+.++..++- ..-++++
T Consensus        23 s~~Ei~~l~~~F~~~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~e~~~  102 (190)
T d1fpwa_          23 DRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLS  102 (190)
T ss_dssp             THHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHHH
T ss_pred             CHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHccCchHHHHH
Confidence            4566666766665322 2466667776766666654432 22223445555666677777777777776653 2333344


Q ss_pred             HHH
Q 030467          132 ERI  134 (177)
Q Consensus       132 ~~l  134 (177)
                      ...
T Consensus       103 ~~F  105 (190)
T d1fpwa_         103 WAF  105 (190)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            433

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=87.50  E-value=0.7  Score=31.64  Aligned_cols=62  Identities=11%  Similarity=0.110  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      .+...+.|+.|=....+.|..+-+...+..||++|..-.+-.    +....-|.++-++|+.-+..
T Consensus         4 ~~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~----~~~~~~~~i~~~eF~~~~~~   65 (140)
T d1ggwa_           4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITE----IESTLPAEVDMEQFLQVLNR   65 (140)
T ss_dssp             CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHH----HHTTSCSSEEHHHHHHHHCT
T ss_pred             HHHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhh----hhccccccccchhhhhhhhh
Confidence            356678899994334469999999999999999997654432    23455688999999887654

>d1vdla_ a.5.2.1 (A:) Ubiquitin carboxyl-terminal hydrolase 25 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin carboxyl-terminal hydrolase 25
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.21  E-value=0.21  Score=32.49  Aligned_cols=42  Identities=31%  Similarity=0.305  Sum_probs=34.3

Q ss_pred             cHHHHHHHHHHhhCCC-HHHHHHHHHhCCCCccccchhhcccc
Q 030467            7 SNRDKLQQFVSITGAS-EKAALQALKASDWHLEGAFDVFYSQP   48 (177)
Q Consensus         7 ~q~~~i~~F~~~T~~s-~~~A~~~L~~~~w~le~A~~~ff~~~   48 (177)
                      .|+-.+.|..+|||.. ...-...|+.++.||..|+.---+.+
T Consensus        23 hqQ~lLNQLrEITGIqD~q~L~~ALkas~Gdl~~AV~~LT~~~   65 (80)
T d1vdla_          23 HQQTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAKN   65 (80)
T ss_dssp             CHHHHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHhCCCcHHHHHHHHHhcCCCHHHHHHHHhcCC
Confidence            4566789999999996 67788999999999999986554443

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.93  E-value=0.65  Score=32.90  Aligned_cols=98  Identities=11%  Similarity=0.019  Sum_probs=64.8

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCC-----HHHHHHHHhhCccccccccHHHHHhhhhhc-----
Q 030467           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD-----IVMLVVSWHMKAATMCEFSKQEFIGGLQSL-----  122 (177)
Q Consensus        53 ~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed-----~~~L~la~~l~a~~~g~~tr~eF~~g~~~l-----  122 (177)
                      +.....+.++|+++.+. +..|+.+=+.+.+..+|+.|..     -.+-.+-..+....-|.|+-+||+..+...     
T Consensus         3 ~~~~~~~~~~F~~~~~~-dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~~~~~~   81 (172)
T d1juoa_           3 GQTQDPLYGYFAAVAGQ-DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQ   81 (172)
T ss_dssp             TCCCCTTHHHHHHHHTT-TTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHhCCC-CCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhhhhhhH
Confidence            34456788999999764 4699999999999999998742     223334456778888899999998776442     


Q ss_pred             ----------CCCcHHHHHHHHHHHHHHccChhHHHHHHH
Q 030467          123 ----------GIDSLDKFRERISFMRAELKDEQKFREIYN  152 (177)
Q Consensus       123 ----------~~dsl~~lk~~l~~l~~~l~~~~~Fk~iY~  152 (177)
                                |+=+.+.++..|..+...+. +..++.+.+
T Consensus        82 ~f~~~D~d~sG~i~~~El~~~l~~~g~~ls-~~~~~~l~~  120 (172)
T d1juoa_          82 HFISFDTDRSGTVDPQELQKALTTMGFRLS-PQAVNSIAK  120 (172)
T ss_dssp             HHHTTCTTCCSEECHHHHHHHHHHTTCCCC-HHHHHHHHH
T ss_pred             HHHHhCcCCCCcCCHHHHHHHHHHHHHhhh-HHHHHHHHH
Confidence                      12256677777666544332 233444433

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=86.54  E-value=1  Score=30.56  Aligned_cols=66  Identities=6%  Similarity=-0.034  Sum_probs=46.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ....|.++|..|-......|+.+-+.+.+..+|..+.+-.+=.+.. .-...-|.|+-+||++-+..
T Consensus        79 ~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~-~~~d~dG~I~y~eF~~~ll~  144 (145)
T d2mysc_          79 TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-GQEDSNGCINYEAFVKHIMS  144 (145)
T ss_pred             hHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHh-hcCCCCCeEEHHHHHHHHhc
Confidence            4566888999985444569999999999999997664433322222 23345689999999987654

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=86.45  E-value=2.6  Score=28.69  Aligned_cols=66  Identities=8%  Similarity=0.013  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHhcCCCC-CccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYL-DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~-d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      .+.|.++|+.+-.+.. ..|+.+=+...+..||+.+....+..+.+.......|.++.++|......
T Consensus        13 ~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (156)
T d1dtla_          13 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   79 (156)
T ss_dssp             HHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhh
Confidence            4567778988854333 58999999999999999998888888888888888899999988876544

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.43  E-value=0.7  Score=33.06  Aligned_cols=61  Identities=7%  Similarity=-0.057  Sum_probs=24.7

Q ss_pred             HHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        60 ~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ..+|+.+-...++.|+.+-....+..+.-.+.+-.+-.+-..+-...-|.|+++|+...++
T Consensus        63 ~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~  123 (187)
T d1g8ia_          63 TFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVD  123 (187)
T ss_dssp             HHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHhCcCCCCCCcHHHHHHHHHHhccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHH
Confidence            3455554322223455554444444333222211111122233344455555555554444

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.30  E-value=3.9  Score=28.44  Aligned_cols=113  Identities=10%  Similarity=-0.021  Sum_probs=70.5

Q ss_pred             HHHHHHHHHhhCCCHHHHHHHHHhC----CCCccccchhhccccC-CC-CcCCHHHHHHHHHHhcCCCCCccCHHHHHHH
Q 030467            9 RDKLQQFVSITGASEKAALQALKAS----DWHLEGAFDVFYSQPQ-SK-SLTDTRHLEELYNRYKDPYLDMILVDGITLL   82 (177)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~----~w~le~A~~~ff~~~~-~~-~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~~~   82 (177)
                      ++.|++++..|+.|+..-..+.+..    + +=..-...|...-. .. .......+.++|+.+-...++.|+.+-...+
T Consensus         6 ~~~~~~L~~~t~fs~~ei~~l~~~F~~~~~-~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~   84 (181)
T d1bjfa_           6 PEVMQDLLESTDFTEHEIQEWYKGFLRDCP-SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIA   84 (181)
T ss_dssp             HHHHHHHHHHSSCCHHHHHHHHHHHHHHST-TSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHH
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHhhCC-CCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHH
Confidence            4679999999999987766555442    1 10011112211100 01 1123345678999886555568998888888


Q ss_pred             HhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           83 CNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        83 ~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      +..+--...+-.+-.+-.++....-|.|+++||...++.+
T Consensus        85 ~~~~~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~  124 (181)
T d1bjfa_          85 LSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAI  124 (181)
T ss_dssp             HHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             HHHHhhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHHH
Confidence            8766544433344445556677889999999999998874

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.90  E-value=1.1  Score=31.61  Aligned_cols=61  Identities=8%  Similarity=-0.002  Sum_probs=26.1

Q ss_pred             HHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhh
Q 030467           60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (177)
Q Consensus        60 ~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~  120 (177)
                      ..+|+.|-....+.|+.+..+..+.-+--.+.+..+=.+...+....-|.|+++|+...+.
T Consensus        54 ~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~  114 (178)
T d1s6ca_          54 HYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVK  114 (178)
T ss_dssp             HHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCcccHHHHHHHHHHHhccchHHHHHHHHHhhccCCCCeecHHHHHHHHH
Confidence            4455555332223455555544444333333222222223333344455555555554443

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=85.52  E-value=1.8  Score=29.74  Aligned_cols=67  Identities=7%  Similarity=-0.002  Sum_probs=45.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCc--cccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKA--ATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a--~~~g~~tr~eF~~g~~~  121 (177)
                      ....|.+.|..|-....+.|+++-+.+.|..+|..+.+-.+=.+...+..  ..-|.|+-++|++-|..
T Consensus        80 ~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~  148 (152)
T d1wdcc_          80 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA  148 (152)
T ss_dssp             CHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred             HHHhhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhc
Confidence            34667788888844344688888888888888887765554444444443  23478888888877653

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=85.08  E-value=1.3  Score=29.17  Aligned_cols=60  Identities=12%  Similarity=0.016  Sum_probs=42.1

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~  119 (177)
                      ...+..+|..|-......|.++-+.+++..+|++    .+.-+...+..-.=|.||.+||++-|
T Consensus        74 ~~~~~~~F~~~D~~~~g~i~~~el~~~~~~~~~~----~~~~~~~~~D~d~dG~is~~EF~~~~  133 (134)
T d1jfja_          74 KIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTCH----HHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             cccccccccccccccCCcccHHHHHHHHHhcCcH----HHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence            4567888888854444688999999998887753    23333455666677889999998644

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.36  E-value=0.96  Score=32.60  Aligned_cols=115  Identities=6%  Similarity=-0.049  Sum_probs=69.8

Q ss_pred             cHHHHHHHHHHhhCCCHHHHHHHHHhC----CCCccccchhhccccC--CCCcCCHHHHHHHHHHhcCCCCCccCHHHHH
Q 030467            7 SNRDKLQQFVSITGASEKAALQALKAS----DWHLEGAFDVFYSQPQ--SKSLTDTRHLEELYNRYKDPYLDMILVDGIT   80 (177)
Q Consensus         7 ~q~~~i~~F~~~T~~s~~~A~~~L~~~----~w~le~A~~~ff~~~~--~~~~~~~~~l~~lF~~Y~d~~~d~I~~dG~~   80 (177)
                      -.++.++++...|+-++.....+.+..    + +=-.-.+.|-..-.  .........+..+|..+-...++.|+.+-..
T Consensus         8 l~~e~l~~l~~~t~f~~~ei~~l~~~F~~~~~-~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~   86 (201)
T d1omra_           8 LSKEILEELQLNTKFTEEELSSWYQSFLKECP-SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYV   86 (201)
T ss_dssp             HHHHHHHHHGGGCSSCHHHHHHHHHHHHHHCT-TSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHH
T ss_pred             CCHHHHHHHHHhCCCCHHHHHHHHHHHHHHCc-CCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHH
Confidence            345668899999999987777655543    1 10112222211100  0112334556788888844444689888888


Q ss_pred             HHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           81 LLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        81 ~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      ..+..+.-.+.+-.+-.+-..+....-|.|+++||...++.+
T Consensus        87 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~  128 (201)
T d1omra_          87 IALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI  128 (201)
T ss_dssp             HHHHHHHSSCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHhhcccchHHHHHHHHHHHccCCCCccCHHHHHHHHHHH
Confidence            888777665543333333344567788999999998888775

>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: N-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.93  E-value=0.34  Score=32.32  Aligned_cols=43  Identities=16%  Similarity=0.301  Sum_probs=36.4

Q ss_pred             CCCccHHHHHHHHHHhhC-------CCHHHHHHHHHhCCCCccccchhhc
Q 030467            3 KLSRSNRDKLQQFVSITG-------ASEKAALQALKASDWHLEGAFDVFY   45 (177)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~-------~s~~~A~~~L~~~~w~le~A~~~ff   45 (177)
                      .|++.|.+.+.+|.+...       .+.....+||...+||++.|...+-
T Consensus        25 ~Lt~~q~~~L~elr~~l~~~~~~~~~DD~~llRfLrAr~fd~~~a~~ml~   74 (93)
T d1auaa1          25 NLDSAQEKALAELRKLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEMFE   74 (93)
T ss_dssp             TCCTTHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHccCCHHHHHHHHH
Confidence            589999999999987432       3678999999999999999998874

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.05  E-value=3.5  Score=29.29  Aligned_cols=67  Identities=9%  Similarity=0.051  Sum_probs=49.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHhHc-------CCCCCCHHHHH--HHHhhCccccccccHHHHHhhhhh
Q 030467           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL-------QVDPQDIVMLV--VSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        55 ~~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edL-------gv~~ed~~~L~--la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...++..+|.-|--...+.|+.+-+.+++..+       .++++.+.-++  +-..+....-|.||.+||.+.+.+
T Consensus        93 ~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~  168 (180)
T d1xo5a_          93 PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR  168 (180)
T ss_dssp             HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            35678889999943344699999999998865       34445554443  445667888899999999988775

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=82.83  E-value=2.4  Score=27.74  Aligned_cols=64  Identities=11%  Similarity=0.081  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCC---------CCCCHHHHHHHHhhCccccccccHHHHHhhhhhc
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV---------DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv---------~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~l  122 (177)
                      -..|..+|++|.+. .+.|+.+-+.+++..++-         +|+.+.  .+...+-...=|.|+-+||+.-|..+
T Consensus         9 i~~l~~~F~~y~~~-dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~--~~~~~~D~n~DG~I~F~EF~~li~~l   81 (100)
T d1psra_           9 IIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLA--DVFEKKDKNEDKKIDFSEFLSLLGDI   81 (100)
T ss_dssp             HHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGG--THHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCC-CCcccHHHHHHHHHHHccccccccccCCHHHHH--HHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            35677899999753 469999999999988652         343333  23467788889999999999888775

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.19  E-value=2.4  Score=29.61  Aligned_cols=65  Identities=8%  Similarity=0.058  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHhHcCCCCCCHHHHHHHHhhCccccccccHHHHHhhhhh
Q 030467           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (177)
Q Consensus        56 ~~~l~~lF~~Y~d~~~d~I~~dG~~~~~edLgv~~ed~~~L~la~~l~a~~~g~~tr~eF~~g~~~  121 (177)
                      ...+...|.+|-...+..|+.+-+.+.+..+|..+..-. +-+....-...-|.|+.+||+..+..
T Consensus        76 ~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~-~~~~~~~d~d~~G~i~~~EF~~~~~~  140 (173)
T d1alva_          76 IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHL-YSMIIRRYSDEGGNMDFDNFISCLVR  140 (173)
T ss_dssp             HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHH-HHHHHHHHTCSSSCBCHHHHHHHHHH
T ss_pred             hhHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHH-HHHhhccccCCCCeEeHHHHHHHHHH
Confidence            355666787774444569999999999999998874322 22222333467799999999998754