Citrus Sinensis ID: 030483
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 176 | 2.2.26 [Sep-21-2011] | |||||||
| Q6PQJ9 | 389 | 3-oxo-Delta(4,5)-steroid | N/A | no | 0.914 | 0.413 | 0.385 | 1e-27 | |
| Q9STX2 | 388 | 3-oxo-Delta(4,5)-steroid | yes | no | 0.880 | 0.399 | 0.404 | 8e-27 |
| >sp|Q6PQJ9|5BPOR_DIGLA 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Digitalis lanata PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 102/205 (49%), Gaps = 44/205 (21%)
Query: 1 MEKQDQNPK--SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF---PT 55
+E+ D PK SVALI+GVTGI G SLAE L TPG PWKVYG ARR P W P
Sbjct: 16 LEEDDAQPKHSSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPI 75
Query: 56 ALVQ------------------------------ESEEVNIFKNSTMLKNVLSVLVSSNS 85
VQ +E+ N NS M +NVL ++ +
Sbjct: 76 NYVQCDISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCP 135
Query: 86 GRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV---S 142
L+H++L TG KHYMGP G++ ++ P+ ED RL + NFYY+LED+
Sbjct: 136 ---NLKHISLQTGRKHYMGPF---ESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEE 189
Query: 143 ASYSPAITYSVHRSSVIIGASPRSL 167
+T+SVHR I G SP S+
Sbjct: 190 VEKKEGLTWSVHRPGNIFGFSPYSM 214
|
Involved in cardenolide biosynthesis. Catalyzes the stereospecific conversion of progesterone to 5-beta-pregnane-3,20-dione. Can use progesterone, testosterone, 4-androstene-3,17-dione, cortisol and cortisone as substrates, but not pregnenolone, 21-OH-pregnenolone or isoprogesterone. NADPH could not be replaced by NADH. Digitalis lanata (taxid: 49450) EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 3 |
| >sp|Q9STX2|VEP1_ARATH 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Arabidopsis thaliana GN=VEP1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 119 bits (299), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 99/198 (50%), Gaps = 43/198 (21%)
Query: 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------------- 52
Q+ +SVALIIGVTGI G SLAE L TPG PWKVYG ARRP P W
Sbjct: 23 QSFESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYGVARRPRPTWNADHPIDYIQCDV 82
Query: 53 --------------------FPTALVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRH 92
+ T +ESE N N +ML+NVL ++ LRH
Sbjct: 83 SDAEDTRSKLSPLTDVTHVFYVTWTNRESESENCEANGSMLRNVLQAIIPY---APNLRH 139
Query: 93 VALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV---SASYSPAI 149
V L TGTKHY+GP ++ G ++ PF ED RL NFYY ED+ +
Sbjct: 140 VCLQTGTKHYLGPF--TNVDGP--RHDPPFTEDMPRLQIQNFYYTQEDILFEEIKKIETV 195
Query: 150 TYSVHRSSVIIGASPRSL 167
T+S+HR ++I G SP SL
Sbjct: 196 TWSIHRPNMIFGFSPYSL 213
|
Involved in vascular strand development. Catalyzes the stereospecific conversion of progesterone to 5-beta-pregnane-3,20-dione. Can use progesterone, testosterone, 21-acetyl cortexone, 2-cyclohexenone, but-1-en-3-one, ethyl acrylate, ethylmethacrylate, cortisone and canarigenone as substrates, lower activity with 3-methyl-2-cyclohexenone and 3,5,5-trimethyl-2-cyclohexenone as substrate, and no activity with canarigenin, canarigenin digitoxoside and pregnenolone. May be involved in the formation of 5-beta phytoecdysteroids. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 176 | ||||||
| 224132720 | 377 | predicted protein [Populus trichocarpa] | 0.937 | 0.437 | 0.579 | 3e-54 | |
| 224132716 | 377 | predicted protein [Populus trichocarpa] | 0.937 | 0.437 | 0.579 | 3e-54 | |
| 118489550 | 377 | unknown [Populus trichocarpa x Populus d | 0.931 | 0.435 | 0.577 | 6e-54 | |
| 225431890 | 376 | PREDICTED: uncharacterized protein C757. | 0.920 | 0.430 | 0.55 | 1e-49 | |
| 359477226 | 470 | PREDICTED: uncharacterized protein C757. | 0.914 | 0.342 | 0.535 | 2e-49 | |
| 356521805 | 374 | PREDICTED: uncharacterized protein LOC10 | 0.920 | 0.433 | 0.507 | 1e-46 | |
| 357473789 | 376 | hypothetical protein MTR_4g073090 [Medic | 0.880 | 0.412 | 0.526 | 3e-45 | |
| 357478899 | 376 | hypothetical protein MTR_4g121570 [Medic | 0.903 | 0.422 | 0.494 | 1e-43 | |
| 357478903 | 376 | hypothetical protein MTR_4g121590 [Medic | 0.886 | 0.414 | 0.476 | 6e-41 | |
| 148907065 | 399 | unknown [Picea sitchensis] | 0.914 | 0.403 | 0.406 | 3e-30 |
| >gi|224132720|ref|XP_002327864.1| predicted protein [Populus trichocarpa] gi|222837273|gb|EEE75652.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/202 (57%), Positives = 133/202 (65%), Gaps = 37/202 (18%)
Query: 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALV-- 58
MEK+ + SVALI+G+TG++G SLAEAL+ PTTPG PWKVYG ARRP P WFP LV
Sbjct: 1 MEKEISSDASVALIVGITGLAGFSLAEALQKPTTPGRPWKVYGIARRPLPIWFPAFLVDG 60
Query: 59 ---------------------------------QESEEVNIFKNSTMLKNVLSVLVSSNS 85
+EEVNI NSTML NVL+ L S+
Sbjct: 61 FISLDALDCADTANKLSPVAHEITHVFWVSMQHHGNEEVNISMNSTMLANVLNALKST-- 118
Query: 86 GRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASY 145
SRLRHV LLTGTKHYMGPIFDPSL GQL+ E PFKED RLP+PNFYY LED+ ASY
Sbjct: 119 APSRLRHVTLLTGTKHYMGPIFDPSLRGQLVHQEPPFKEDLGRLPYPNFYYALEDLVASY 178
Query: 146 SPAITYSVHRSSVIIGASPRSL 167
P+IT+SVHRSS+IIGAS RSL
Sbjct: 179 LPSITHSVHRSSIIIGASSRSL 200
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224132716|ref|XP_002327863.1| predicted protein [Populus trichocarpa] gi|222837272|gb|EEE75651.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/202 (57%), Positives = 133/202 (65%), Gaps = 37/202 (18%)
Query: 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALV-- 58
MEK+ VALI+GVTG+ G SLAEALK PTT GSPWKVYG ARRP P WFP++L+
Sbjct: 1 MEKEKSPDTLVALIVGVTGMVGFSLAEALKQPTTQGSPWKVYGVARRPLPSWFPSSLIDC 60
Query: 59 ---------------------------------QESEEVNIFKNSTMLKNVLSVLVSSNS 85
++SEEVNI NSTML NVL+ L S+
Sbjct: 61 FLSLDALDHEDTKNKLFPVAHEITHVFWISRKLRDSEEVNISMNSTMLANVLNALKSAFP 120
Query: 86 GRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASY 145
SRLRHV LLTGTKHYMGPIFDPSL GQL+ E PFKED RLP+PNFYY LED+ SY
Sbjct: 121 --SRLRHVTLLTGTKHYMGPIFDPSLRGQLVHQEPPFKEDLGRLPYPNFYYALEDLVVSY 178
Query: 146 SPAITYSVHRSSVIIGASPRSL 167
P+IT+SVHRSS+IIGAS RSL
Sbjct: 179 LPSITHSVHRSSIIIGASSRSL 200
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118489550|gb|ABK96577.1| unknown [Populus trichocarpa x Populus deltoides] | Back alignment and taxonomy information |
|---|
Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 116/201 (57%), Positives = 132/201 (65%), Gaps = 37/201 (18%)
Query: 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALV-- 58
MEK++ + SVALI+G+TG++G SLAEAL+ PTTPG PWKVYG ARRP P WFP LV
Sbjct: 1 MEKENSSDASVALIVGITGLAGFSLAEALQKPTTPGRPWKVYGIARRPLPRWFPAFLVDG 60
Query: 59 ---------------------------------QESEEVNIFKNSTMLKNVLSVLVSSNS 85
+EEVNI NSTML NVL+ L S+
Sbjct: 61 FISLDALDCADTANKLSPVAHEITHVFWVSMQHHGNEEVNISMNSTMLANVLNALKST-- 118
Query: 86 GRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASY 145
SRLRHV LLTGTKHYMGPIFDPSL GQL+ E PFKED RLP PNFYY LED+ ASY
Sbjct: 119 APSRLRHVTLLTGTKHYMGPIFDPSLRGQLVHQEPPFKEDLGRLPCPNFYYALEDLVASY 178
Query: 146 SPAITYSVHRSSVIIGASPRS 166
P+IT+SVHRSS+IIGAS RS
Sbjct: 179 LPSITHSVHRSSIIIGASSRS 199
|
Source: Populus trichocarpa x Populus deltoides Species: Populus trichocarpa x Populus deltoides Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225431890|ref|XP_002276159.1| PREDICTED: uncharacterized protein C757.02c-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/200 (55%), Positives = 129/200 (64%), Gaps = 38/200 (19%)
Query: 5 DQNPK-SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALV----- 58
DQ P SVALI+GVTG++GLSLAEALK P+ GSPWKVYGAARRP P WFP ++V
Sbjct: 4 DQIPHASVALIVGVTGMAGLSLAEALKKPSASGSPWKVYGAARRPQPTWFPISIVDHYMT 63
Query: 59 ------------------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRS 88
+E+EE+NI N+ ML NVL V S+ S S
Sbjct: 64 FDAVCSDDTRAKLSPISNEVTHVFWVAIQVRETEELNITVNAAMLSNVLEVFKSAPS--S 121
Query: 89 RLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASYSPA 148
RL+HV L TGTKHYMGPIF P + QL E PF+ED RLPFPNFYY LED+ AS++P+
Sbjct: 122 RLQHVTLQTGTKHYMGPIFYPEKSKQLTAPETPFREDFPRLPFPNFYYALEDLLASHTPS 181
Query: 149 ITYSVHRSSVIIGASPRSLY 168
TYSVHRSS+IIGAS RS Y
Sbjct: 182 FTYSVHRSSIIIGASSRSTY 201
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359477226|ref|XP_002276059.2| PREDICTED: uncharacterized protein C757.02c-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 131/198 (66%), Gaps = 37/198 (18%)
Query: 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTA--------- 56
Q+ K+VALI+GVTG+ GLSLAEALK P G PWKVYGAARRP P WFPT+
Sbjct: 96 QSYKTVALIVGVTGMVGLSLAEALKKPRALGGPWKVYGAARRPKPTWFPTSNVDDYIAFD 155
Query: 57 --------------------------LVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL 90
V+E+EE+N+ N+ ML NVL VL S S SRL
Sbjct: 156 AVNPDDTRAKLSPISHEVTHVFWVAIQVRETEELNVTVNAAMLSNVLGVLKSVPS--SRL 213
Query: 91 RHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASYSPAIT 150
RH+ L TGT+HY+GP+ DP+ +GQL E PF+EDS+RLPFPNFYY LED+ ASYSP+++
Sbjct: 214 RHLTLQTGTQHYIGPLHDPNHSGQLPCPETPFREDSARLPFPNFYYALEDLIASYSPSLS 273
Query: 151 YSVHRSSVIIGASPRSLY 168
YS+HRSS+I+GAS RS Y
Sbjct: 274 YSIHRSSIILGASSRSAY 291
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356521805|ref|XP_003529541.1| PREDICTED: uncharacterized protein LOC100812240 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 125/203 (61%), Gaps = 41/203 (20%)
Query: 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVQE 60
ME Q SVALI+GVTG++GLSLAE LK P G PWKVYGAARRPPP WF ++V
Sbjct: 1 MEAQ----ASVALIVGVTGLTGLSLAETLKKPNCLGGPWKVYGAARRPPPSWFSPSMVDH 56
Query: 61 -----------------------------------SEEVNIFKNSTMLKNVLSVLVSSNS 85
EE N N TML N+L+ L SS +
Sbjct: 57 FITFDAEDSSDTRAKLSPIAHEVTHLFWVTFQIHADEEYNATVNKTMLLNLLTALKSSTT 116
Query: 86 GRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASY 145
SRL HV + TGTKHYMGP+FDP + QL+ ++ PF E+ RLP+PNFYY LED+ ASY
Sbjct: 117 --SRLAHVTVQTGTKHYMGPVFDPVHSTQLIGHQPPFDENMPRLPYPNFYYALEDLVASY 174
Query: 146 SPAITYSVHRSSVIIGASPRSLY 168
+P++TYSVHRSS+IIGAS RS+Y
Sbjct: 175 APSLTYSVHRSSIIIGASSRSVY 197
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357473789|ref|XP_003607179.1| hypothetical protein MTR_4g073090 [Medicago truncatula] gi|355508234|gb|AES89376.1| hypothetical protein MTR_4g073090 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 123/192 (64%), Gaps = 37/192 (19%)
Query: 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTA------------- 56
SVAL++GVTG++GLSLA+ALK P G PWKVYGAARR GWFP++
Sbjct: 6 SVALVVGVTGMAGLSLAKALKQPDCLGGPWKVYGAARRSADGWFPSSILDGFITFDAVNS 65
Query: 57 ---------LVQE-------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVA 94
LVQE EE NI N TML NVL+VL SS S S L H+
Sbjct: 66 ADTHDKLLPLVQEVTHLFWVTFQFVGDEEANITVNKTMLLNVLTVLKSSPS--SSLIHIT 123
Query: 95 LLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASYSPAITYSVH 154
L TGTKHYMGP+ DP L+ +L+ +E PF E+ RLP+PNFYY LED+ SY+P++TYS+H
Sbjct: 124 LQTGTKHYMGPVHDPVLSTKLICHEPPFHENMPRLPYPNFYYVLEDLVTSYAPSVTYSIH 183
Query: 155 RSSVIIGASPRS 166
RSS+IIG SPRS
Sbjct: 184 RSSIIIGMSPRS 195
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357478899|ref|XP_003609735.1| hypothetical protein MTR_4g121570 [Medicago truncatula] gi|355510790|gb|AES91932.1| hypothetical protein MTR_4g121570 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 124/198 (62%), Gaps = 39/198 (19%)
Query: 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVQ---- 59
+ Q+P VAL++GVTG+ GLSLAEALK P G PWKVYG AR P WFP++++
Sbjct: 2 EHQSP--VALVVGVTGMVGLSLAEALKQPDCLGGPWKVYGGARHSPDEWFPSSILDGFIT 59
Query: 60 -------------------------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRS 88
E EEVNI N +ML NV++VL SS S S
Sbjct: 60 FDAVNSADTHAKLLPIANEVTHIFWVTFQFVEDEEVNITVNKSMLHNVVTVLKSSPS--S 117
Query: 89 RLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASYSPA 148
L H+ + TGTKHYMGPI+DP + +L+ +E PF E+ RLP+PNFYY LED+ ASY+P+
Sbjct: 118 PLTHITVQTGTKHYMGPIYDPVRSNKLICHEPPFNENMPRLPYPNFYYTLEDLVASYTPS 177
Query: 149 ITYSVHRSSVIIGASPRS 166
ITYS+HRSS+IIGAS RS
Sbjct: 178 ITYSIHRSSLIIGASSRS 195
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357478903|ref|XP_003609737.1| hypothetical protein MTR_4g121590 [Medicago truncatula] gi|355510792|gb|AES91934.1| hypothetical protein MTR_4g121590 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 119/193 (61%), Gaps = 37/193 (19%)
Query: 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVQE---------- 60
VAL++GVTG++GLSLA+ALK P G PWKVYGAAR P WFP++++
Sbjct: 7 VALVVGVTGMAGLSLAKALKQPDCLGGPWKVYGAARHSPDEWFPSSILDSFITFDAVNSA 66
Query: 61 -------------------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVAL 95
EEV I N +ML NVL+VL S S S L H+ +
Sbjct: 67 DTRAKLLPIANEVTHLFWVTFQLVADEEVKISVNKSMLLNVLTVLKSYPS--SPLTHITV 124
Query: 96 LTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASYSPAITYSVHR 155
TGTKHY+GP+ DP + +L+ +E PF+E+ RL +PNFYY LED+ SY+P+ITYS+HR
Sbjct: 125 QTGTKHYLGPVHDPVQSTKLICHEPPFEENMPRLSYPNFYYALEDLVKSYAPSITYSIHR 184
Query: 156 SSVIIGASPRSLY 168
SS+IIGASPRS Y
Sbjct: 185 SSIIIGASPRSAY 197
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|148907065|gb|ABR16676.1| unknown [Picea sitchensis] | Back alignment and taxonomy information |
|---|
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 105/204 (51%), Gaps = 43/204 (21%)
Query: 2 EKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVQ-- 59
E + + + VAL+IGVTGI G SL E L TPG PWK+YG ARRP P W P V+
Sbjct: 26 EDKSEKQQGVALVIGVTGIVGNSLVEILPLSDTPGGPWKIYGVARRPKPDWSPDTSVEYI 85
Query: 60 -------------------------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRS 88
E+EE N N ML NVL L+ +
Sbjct: 86 QCDVLDRELTLEKISPLKDVTHLFWVVWVNRETEEQNCEDNGRMLSNVLDALLPN---AE 142
Query: 89 RLRHVALLTGTKHYMGPIFDPSLAGQ--LMPYEVPFKEDSSRLPFPNFYYELEDV---SA 143
L+H+ L TG KHY+GP FD ++AG P+E P+ E+ RLP PNFYY LED+ +A
Sbjct: 143 NLQHICLQTGAKHYLGP-FD-AVAGNRYFQPHEAPYHEELPRLPVPNFYYTLEDIVFEAA 200
Query: 144 SYSPAITYSVHRSSVIIGASPRSL 167
+T+S+HR S I G SP SL
Sbjct: 201 KKKDGLTWSIHRPSFIFGFSPWSL 224
|
Source: Picea sitchensis Species: Picea sitchensis Genus: Picea Family: Pinaceae Order: Coniferales Class: Coniferopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 176 | ||||||
| TAIR|locus:2135932 | 388 | VEP1 "VEIN PATTERNING 1" [Arab | 0.289 | 0.131 | 0.647 | 2.3e-25 | |
| UNIPROTKB|Q882D3 | 353 | PSPTO_2695 "Uncharacterized pr | 0.625 | 0.311 | 0.352 | 1.9e-13 | |
| UNIPROTKB|Q48IK0 | 353 | PSPPH_2587 "Aldo-keto reductas | 0.738 | 0.368 | 0.321 | 9e-10 | |
| TAIR|locus:2178793 | 386 | AT5G58750 [Arabidopsis thalian | 0.431 | 0.196 | 0.294 | 1.8e-07 |
| TAIR|locus:2135932 VEP1 "VEIN PATTERNING 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 162 (62.1 bits), Expect = 2.3e-25, Sum P(2) = 2.3e-25
Identities = 33/51 (64%), Positives = 37/51 (72%)
Query: 2 EKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW 52
++ Q+ +SVALIIGVTGI G SLAE L TPG PWKVYG ARRP P W
Sbjct: 19 DEPSQSFESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYGVARRPRPTW 69
|
|
| UNIPROTKB|Q882D3 PSPTO_2695 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] | Back alignment and assigned GO terms |
|---|
Score = 145 (56.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 42/119 (35%), Positives = 57/119 (47%)
Query: 47 RPPPGWFPTALVQESEEVNIFKNSTMLKXXXXXXXXXXXXXXXXXHVALLTGTKHYMGPI 106
RP + T Q +E NI N+ M++ HVAL+TG KHY+GP
Sbjct: 63 RPTHIFITTWSRQATEAENIRVNAAMVRNVLDAVRPAGSVK----HVALVTGLKHYLGP- 117
Query: 107 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED--VSASYSPAITYSVHRSSVIIGAS 163
F+ G L P + PF+E RL NFYY ED +A+ T+SVHR + G +
Sbjct: 118 FEAYGKGTL-P-QTPFRESQPRLDIENFYYAQEDEVFAAAEKDRFTWSVHRPHTVTGVA 174
|
|
| UNIPROTKB|Q48IK0 PSPPH_2587 "Aldo-keto reductase family protein" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
Score = 147 (56.8 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 46/143 (32%), Positives = 68/143 (47%)
Query: 23 LSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVQESEEVNIFKNSTMLKXXXXXXXX 82
+ +A L+NP + + A +P + T Q +E NI N+ M++
Sbjct: 43 IPVAADLQNPKSVSAAL----ADLKPTHVFITTWSRQATEAENIRVNAAMVRNVLDAVRP 98
Query: 83 XXXXXXXXXHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-- 140
HVAL+TG KHY+GP F+ G L P + PF+E +RL NFYY ED
Sbjct: 99 AGSVK----HVALVTGLKHYLGP-FEAYGKGTL-P-QTPFRETQARLDIENFYYAQEDEV 151
Query: 141 VSASYSPAITYSVHRSSVIIGAS 163
+A+ T+SVHR + G +
Sbjct: 152 FAAAEKDGFTWSVHRPHTVTGVA 174
|
|
| TAIR|locus:2178793 AT5G58750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 89 (36.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 92 HVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASY--SPAI 149
H +L TG KHY+ + + G+ +E + NFYY LED+ ++
Sbjct: 128 HFSLQTGMKHYVSLVEETMARGEGSSLYYYSEECPRKSSGKNFYYVLEDLLKEKITRSSV 187
Query: 150 TYSVHRSSVIIGASPRSL 167
+SV R +++G+S R+L
Sbjct: 188 VWSVQRPGLLMGSSSRTL 205
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
 |
 |
 |
 |
 |
 |
 |
 |
||
 | fgenesh4_pg.C_scaffold_64000091 | hypothetical protein (377 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 176 | |||
| cd08948 | 308 | cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta | 4e-36 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 4e-08 |
| >gnl|CDD|187652 cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta-reductase-like proteins (5beta-POR), atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 126 bits (320), Expect = 4e-36
Identities = 65/197 (32%), Positives = 83/197 (42%), Gaps = 50/197 (25%)
Query: 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALV------------ 58
VAL++G TGISG +L E L + PG+ WKVYG +RRP P LV
Sbjct: 1 VALVVGATGISGWALVEHL--LSDPGTWWKVYGLSRRPLPTEDDPRLVEHIGIDLLDPAD 58
Query: 59 -----------------------QESEEVNIFKNSTMLKNVLSVL--VSSNSGRSRLRHV 93
+ E + N ML+N L L S N L+HV
Sbjct: 59 TVLRAKLPGLEDVTHVFYAAYIERPDEAELVEVNGAMLRNFLDALEPASPN-----LKHV 113
Query: 94 ALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASYS--PAITY 151
L TGTKHY + E P +ED RL PNFYY+ ED+ + T+
Sbjct: 114 VLQTGTKHYGVHLGPFKTP----RPEEPAREDPPRLLPPNFYYDQEDLLFEAAKGKGWTW 169
Query: 152 SVHRSSVIIGASPRSLY 168
SV R IIG +P +
Sbjct: 170 SVLRPDAIIGFAPGNAM 186
|
5beta-POR catalyzes the reduction of progesterone to 5beta-pregnane-3,20-dione in Digitalis plants. This subgroup of atypical-extended SDRs, shares the structure of an extended SDR, but has a different glycine-rich nucleotide binding motif (GXXGXXG) and lacks the YXXXK active site motif of classical and extended SDRs. Tyr-179 and Lys 147 are present in the active site, but not in the usual SDR configuration. Given these differences, it has been proposed that this subfamily represents a new SDR class. Other atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 4e-08
Identities = 30/180 (16%), Positives = 46/180 (25%), Gaps = 56/180 (31%)
Query: 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP----------------- 54
LI+G TG G +LA L +V R
Sbjct: 1 ILILGATGFIGRALARELLEQG-----HEVTLLVRNTKRLSKEDQEPVAVVEGDLRDLDS 55
Query: 55 -TALVQESEEV------------NIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101
+ VQ + V + +NVL + ++H ++
Sbjct: 56 LSDAVQGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAG-----VKHFIFISSLGA 110
Query: 102 YMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASYSPAITYSVHRSSVIIG 161
Y E S P+ + E V S Y++ R VI G
Sbjct: 111 YGDLH--------------EETEPSPSSPYLAVKAKTEAVLREASL--PYTIVRPGVIYG 154
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 176 | |||
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.9 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.88 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.88 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.87 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.84 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.84 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.84 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.84 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.83 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.83 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.83 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.83 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.83 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.82 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.82 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.81 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.81 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.81 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.8 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.8 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.8 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.8 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.79 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.79 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.79 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.78 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.78 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.78 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.78 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.78 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.78 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.78 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.77 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.77 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.77 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.76 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.75 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.74 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.74 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.74 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.74 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.72 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.72 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.7 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.7 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.68 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.68 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.68 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.66 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.66 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.64 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.64 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.63 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.63 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.62 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.6 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.58 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.57 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.56 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.55 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.54 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.5 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.5 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.49 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.44 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.43 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.43 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.43 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.34 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.3 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.29 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.29 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.28 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.26 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.25 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.24 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.24 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.23 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.21 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.21 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.21 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.21 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.2 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.2 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.16 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.16 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.15 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.15 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.15 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.14 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.13 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.12 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.1 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.1 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.09 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.09 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.08 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.07 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.07 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.05 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.05 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.05 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.04 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.04 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.04 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.02 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.02 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.02 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.01 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.0 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 98.99 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.99 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 98.99 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.98 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 98.97 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 98.97 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 98.97 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.97 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 98.97 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 98.96 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.95 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.94 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 98.93 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 98.93 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.92 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 98.92 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 98.92 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 98.92 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.91 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 98.9 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.89 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.89 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.89 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 98.89 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.89 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 98.89 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.88 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.87 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.87 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.86 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 98.86 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.85 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.85 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 98.85 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.85 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 98.85 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 98.85 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 98.85 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 98.84 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 98.82 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.82 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 98.82 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 98.82 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 98.82 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 98.82 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 98.82 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.81 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 98.81 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 98.8 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 98.8 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 98.79 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 98.79 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.79 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.79 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.77 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.77 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 98.77 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.77 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 98.75 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 98.75 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 98.75 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.73 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.73 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 98.73 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.72 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.72 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 98.72 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 98.71 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.71 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 98.7 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 98.7 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.7 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 98.7 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.68 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 98.66 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.66 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.65 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.65 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.62 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 98.61 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.61 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.61 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.61 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 98.58 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 98.57 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 98.55 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.55 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 98.48 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.47 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.46 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.43 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.42 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 98.4 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.4 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 98.39 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.37 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.36 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.35 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.35 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.35 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.33 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.3 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.25 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.23 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.15 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.14 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.09 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 98.08 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.07 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.05 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 98.04 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.04 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 98.03 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.02 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.0 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 97.95 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 97.93 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 97.93 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 97.83 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 97.79 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 97.75 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 97.73 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.71 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 97.71 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.67 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 97.66 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 97.63 | |
| PLN00015 | 308 | protochlorophyllide reductase | 97.63 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 97.61 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 97.54 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 97.53 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 97.48 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.33 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.32 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.31 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.31 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 97.29 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 97.27 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 97.25 | |
| PLN00106 | 323 | malate dehydrogenase | 97.23 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.2 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 97.18 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.08 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.08 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 97.03 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.02 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.0 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 96.94 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 96.93 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 96.88 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 96.88 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 96.67 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 96.51 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 96.5 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 96.42 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.36 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.35 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 96.33 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 96.24 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 96.19 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 96.06 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 95.95 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 95.89 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 95.7 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 95.66 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 95.57 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 95.5 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 95.46 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 95.41 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 95.4 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 95.38 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 95.35 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.35 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 95.32 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 95.25 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 95.17 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 95.09 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 95.07 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 94.91 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 94.88 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 94.8 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.76 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 94.71 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 94.68 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 94.62 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 94.55 | |
| PRK06249 | 313 | 2-dehydropantoate 2-reductase; Provisional | 94.45 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 94.36 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 94.28 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 94.23 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 94.22 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 94.21 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 94.2 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 94.2 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 94.19 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 94.19 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 94.16 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 94.1 | |
| PLN02256 | 304 | arogenate dehydrogenase | 94.1 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 94.03 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 93.98 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 93.98 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 93.87 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 93.73 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 93.65 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 93.62 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 93.56 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 93.49 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 93.43 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 93.35 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 93.22 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 93.2 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 93.17 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.15 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 93.11 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 93.08 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 92.97 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 92.97 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 92.93 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 92.85 | |
| PLN02602 | 350 | lactate dehydrogenase | 92.75 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 92.73 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 92.7 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 92.68 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 92.56 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 92.53 | |
| PRK12409 | 410 | D-amino acid dehydrogenase small subunit; Provisio | 92.32 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 92.26 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 92.2 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 92.19 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 92.18 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 92.14 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 92.1 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 92.09 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 92.0 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 91.98 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 91.96 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 91.95 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 91.94 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 91.89 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 91.86 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 91.82 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 91.77 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 91.71 | |
| COG0794 | 202 | GutQ Predicted sugar phosphate isomerase involved | 91.71 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 91.69 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 91.68 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 91.63 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 91.61 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 91.59 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 91.55 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 91.39 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 91.33 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 91.3 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 91.25 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 91.24 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 91.23 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 91.2 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 91.19 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 91.07 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 91.07 | |
| PF13380 | 116 | CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 | 91.02 | |
| PRK07236 | 386 | hypothetical protein; Provisional | 91.02 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 90.88 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 90.85 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 90.85 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 90.59 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 90.58 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 90.57 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 90.56 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 90.5 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 90.48 | |
| PRK05708 | 305 | 2-dehydropantoate 2-reductase; Provisional | 90.24 | |
| PRK00711 | 416 | D-amino acid dehydrogenase small subunit; Validate | 90.21 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 90.18 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 90.18 | |
| COG0665 | 387 | DadA Glycine/D-amino acid oxidases (deaminating) [ | 90.16 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 90.15 | |
| PRK11259 | 376 | solA N-methyltryptophan oxidase; Provisional | 90.14 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 90.07 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 90.01 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 89.93 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 89.92 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 89.72 | |
| PLN02712 | 667 | arogenate dehydrogenase | 89.71 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 89.57 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 89.56 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 89.53 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 89.51 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 89.46 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 89.41 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 89.38 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 89.37 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 89.25 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 89.18 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 89.15 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 89.12 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 89.04 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 88.93 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 88.92 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 88.82 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 88.77 | |
| cd01076 | 227 | NAD_bind_1_Glu_DH NAD(P) binding domain of glutama | 88.71 | |
| PRK14620 | 326 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 88.7 | |
| PRK06753 | 373 | hypothetical protein; Provisional | 88.62 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 88.52 | |
| PRK11749 | 457 | dihydropyrimidine dehydrogenase subunit A; Provisi | 88.51 | |
| PRK05678 | 291 | succinyl-CoA synthetase subunit alpha; Validated | 88.49 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 88.46 | |
| PTZ00318 | 424 | NADH dehydrogenase-like protein; Provisional | 88.39 | |
| TIGR01019 | 286 | sucCoAalpha succinyl-CoA synthetase, alpha subunit | 88.36 | |
| PRK11728 | 393 | hydroxyglutarate oxidase; Provisional | 88.27 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 88.19 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 88.03 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 88.01 | |
| PLN02712 | 667 | arogenate dehydrogenase | 88.01 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 88.01 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 87.95 | |
| PRK09126 | 392 | hypothetical protein; Provisional | 87.84 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 87.8 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 87.73 | |
| PRK08268 | 507 | 3-hydroxy-acyl-CoA dehydrogenase; Validated | 87.69 | |
| PRK08773 | 392 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy | 87.69 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 87.66 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 87.63 | |
| cd05289 | 309 | MDR_like_2 alcohol dehydrogenase and quinone reduc | 87.63 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 87.6 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 87.58 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 87.58 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 87.57 | |
| PRK05335 | 436 | tRNA (uracil-5-)-methyltransferase Gid; Reviewed | 87.45 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 87.44 | |
| TIGR00243 | 389 | Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras | 87.43 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 87.19 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 87.16 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 87.11 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 87.02 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 86.99 | |
| PRK06545 | 359 | prephenate dehydrogenase; Validated | 86.94 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 86.94 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 86.84 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 86.8 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 86.76 | |
| KOG1496 | 332 | consensus Malate dehydrogenase [Energy production | 86.74 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 86.71 | |
| PRK08163 | 396 | salicylate hydroxylase; Provisional | 86.71 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 86.69 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 86.69 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 86.64 |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.2e-23 Score=163.49 Aligned_cols=133 Identities=17% Similarity=0.149 Sum_probs=104.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----CC--C-------C-------------Ccc----
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WF--P-------T-------------ALV---- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~--~-------~-------------~~v---- 58 (176)
|+||||||+||||||.|.+|+ +.|++|+.+++-.... +. + + +.|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll-----~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLL-----KTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred CeEEEecCcchhHHHHHHHHH-----HCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence 589999999999999999999 7999999998643221 10 0 0 000
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCC
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 130 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~ 130 (176)
-..|.++++.|+.+|.+|+++|+++ ++++|||.||+++||.+. ..|++|+.|..|
T Consensus 76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-----gv~~~vFSStAavYG~p~------------~~PI~E~~~~~p 138 (329)
T COG1087 76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-----GVKKFIFSSTAAVYGEPT------------TSPISETSPLAP 138 (329)
T ss_pred cccccchhhhCHHHHHhhchHhHHHHHHHHHHh-----CCCEEEEecchhhcCCCC------------CcccCCCCCCCC
Confidence 3367889999999999999999998 699999999999999652 579999998762
Q ss_pred CCcchH----HHHHHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 131 FPNFYY----ELEDVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 131 ~~~~y~----~~e~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.++|. ..|++++. +.++|+.+++|.+|+.|..+.
T Consensus 139 -~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~ 178 (329)
T COG1087 139 -INPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPD 178 (329)
T ss_pred -CCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCC
Confidence 23443 34555555 577899999999999998763
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.2e-22 Score=164.44 Aligned_cols=133 Identities=18% Similarity=0.126 Sum_probs=97.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------CCC------C-----------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------WFP------T----------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~~~------~----------- 55 (176)
.+|+|||||||||||++|+++|+ .+|++|++++|..... +.. +
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~-----~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~ 88 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELL-----FLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC 88 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHH-----HCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence 45799999999999999999999 6899999999853210 000 0
Q ss_pred ---Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCc
Q 030483 56 ---ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 120 (176)
Q Consensus 56 ---~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~ 120 (176)
+.| ..++.+.+++|+.+|.|++++|++. ++++|+++||+++||.. ...
T Consensus 89 ~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-----~~~~~v~~SS~~vyg~~------------~~~ 151 (348)
T PRK15181 89 KNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-----HVSSFTYAASSSTYGDH------------PDL 151 (348)
T ss_pred hCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeechHhhCCC------------CCC
Confidence 001 1244567899999999999999987 68899999999999832 134
Q ss_pred cccCCCCCCCCCcchHHHHH-----HHHh--hCCCceEEEeccCceEeCCC
Q 030483 121 PFKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 121 p~~E~~~~~~~~~~y~~~e~-----~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
|..|+++.. |...|...| ++.. +.++++++++||++||||+.
T Consensus 152 ~~~e~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~ 200 (348)
T PRK15181 152 PKIEERIGR--PLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQ 200 (348)
T ss_pred CCCCCCCCC--CCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence 566766543 333344333 3332 35689999999999999975
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-22 Score=162.86 Aligned_cols=133 Identities=14% Similarity=0.158 Sum_probs=97.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC----CCC-----------CCCcc------------cCcH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP----GWF-----------PTALV------------QESE 62 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----~~~-----------~~~~v------------~~~~ 62 (176)
|+||||||+||||++|+++|+ ++| +|++++|.... ... ..+.| ..++
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~-----~~g-~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~ 74 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALA-----PLG-NLIALDVHSTDYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVDKAESEP 74 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhh-----ccC-CEEEeccccccccCCCCCHHHHHHHHHhcCCCEEEECCccCCcchhhcCH
Confidence 479999999999999999999 678 79999986421 100 01111 2245
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHH
Q 030483 63 EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVS 142 (176)
Q Consensus 63 ~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~ 142 (176)
+..+++|+.++.+++++|++. ++ +++++||..+|++. ...|++|+++.. |...|...|+.
T Consensus 75 ~~~~~~N~~~~~~l~~aa~~~-----g~-~~v~~Ss~~Vy~~~------------~~~p~~E~~~~~--P~~~Yg~sK~~ 134 (299)
T PRK09987 75 EFAQLLNATSVEAIAKAANEV-----GA-WVVHYSTDYVFPGT------------GDIPWQETDATA--PLNVYGETKLA 134 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEccceEECCC------------CCCCcCCCCCCC--CCCHHHHHHHH
Confidence 667789999999999999987 43 69999999999753 135899998754 44456655555
Q ss_pred Hh---hCCCceEEEeccCceEeCCCCCCC
Q 030483 143 AS---YSPAITYSVHRSSVIIGASPRSLY 168 (176)
Q Consensus 143 ~~---~~~g~~~~ivRp~~v~G~~~~~~~ 168 (176)
.| .....+++|+|+++||||+..+++
T Consensus 135 ~E~~~~~~~~~~~ilR~~~vyGp~~~~~~ 163 (299)
T PRK09987 135 GEKALQEHCAKHLIFRTSWVYAGKGNNFA 163 (299)
T ss_pred HHHHHHHhCCCEEEEecceecCCCCCCHH
Confidence 55 234557899999999999865443
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=157.60 Aligned_cols=141 Identities=18% Similarity=0.179 Sum_probs=96.8
Q ss_pred EEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCCC----C--CC---------------------Ccc-----
Q 030483 13 LIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW----F--PT---------------------ALV----- 58 (176)
Q Consensus 13 LVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~~----~--~~---------------------~~v----- 58 (176)
|||||+||||+||+++|+ ++| ++|++++|.+.... . +. +.|
T Consensus 1 LVTGgsGflG~~iv~~Ll-----~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa 75 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLL-----ERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAA 75 (280)
T ss_pred CEEcCCcHHHHHHHHHHH-----HCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCc
Confidence 799999999999999999 688 78999998765421 0 00 001
Q ss_pred ----c--CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCC
Q 030483 59 ----Q--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 132 (176)
Q Consensus 59 ----~--~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~ 132 (176)
. ...++.+++|+.||+||+++|++. +++++||+||..+++.... +. .-...+|+.+..+.+
T Consensus 76 ~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-----~VkrlVytSS~~vv~~~~~-----~~---~~~~~dE~~~~~~~~ 142 (280)
T PF01073_consen 76 PVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-----GVKRLVYTSSISVVFDNYK-----GD---PIINGDEDTPYPSSP 142 (280)
T ss_pred cccccCcccHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcCcceeEeccC-----CC---CcccCCcCCcccccc
Confidence 2 245678999999999999999987 7999999999999874210 10 011234555433223
Q ss_pred cchHHHHHHHHh------hC------CCceEEEeccCceEeCCCCCCCCCC
Q 030483 133 NFYYELEDVSAS------YS------PAITYSVHRSSVIIGASPRSLYXXX 171 (176)
Q Consensus 133 ~~y~~~e~~~~~------~~------~g~~~~ivRp~~v~G~~~~~~~~~~ 171 (176)
...|...|.++| .. ..+.++++||+.||||+...+...+
T Consensus 143 ~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~ 193 (280)
T PF01073_consen 143 LDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRL 193 (280)
T ss_pred cCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchh
Confidence 334554444443 12 2499999999999999975544443
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-20 Score=150.88 Aligned_cols=143 Identities=17% Similarity=0.174 Sum_probs=102.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC--------C--C--C--------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------F--P--T-------------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~--~--~-------------------- 55 (176)
++++|||||||||||+||+++|| .+||.|++..|++.+.. . + .
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL-----~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gc 79 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLL-----SRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGC 79 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHH-----hCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCC
Confidence 66899999999999999999999 79999999999987620 0 0 0
Q ss_pred Ccc-----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 56 ALV-----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 56 ~~v-----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
+.| .+.+.+.++.++.||.|++++|.+. . .|+|||++||+++.... ++.......++|
T Consensus 80 dgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~---~-sVkrvV~TSS~aAv~~~-------~~~~~~~~vvdE 148 (327)
T KOG1502|consen 80 DGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKT---K-SVKRVVYTSSTAAVRYN-------GPNIGENSVVDE 148 (327)
T ss_pred CEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhcc---C-CcceEEEeccHHHhccC-------CcCCCCCccccc
Confidence 000 1123478999999999999999998 3 69999999998765422 111113457788
Q ss_pred CCCCCC----CCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCCCC
Q 030483 125 DSSRLP----FPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPRS 166 (176)
Q Consensus 125 ~~~~~~----~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~~ 166 (176)
+.=..+ ....+|...|.+.| .+.+++.+++.|+.|+||....
T Consensus 149 ~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~ 201 (327)
T KOG1502|consen 149 ESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQP 201 (327)
T ss_pred ccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCccc
Confidence 762210 01234544444433 4668999999999999998744
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.84 E-value=7e-21 Score=151.74 Aligned_cols=139 Identities=18% Similarity=0.221 Sum_probs=112.4
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCCC----------C-c-c-----------cCcHHHHHH
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPT----------A-L-V-----------QESEEVNIF 67 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~----------~-~-v-----------~~~~~~~~~ 67 (176)
++||||++|++|++|+++|. .+++|++++|...+....+ + . | ..+++..+.
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~------~~~~v~a~~~~~~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~ 75 (281)
T COG1091 2 KILITGANGQLGTELRRALP------GEFEVIATDRAELDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFA 75 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC------CCceEEeccCccccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHH
Confidence 49999999999999999997 6799999999886543211 1 1 1 335677899
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh---
Q 030483 68 KNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS--- 144 (176)
Q Consensus 68 ~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~--- 144 (176)
+|..++.|++++|.+. + ..+|++|| ||||.|.. ..||.|+|+.. |..+|+.+|++.|
T Consensus 76 vNa~~~~~lA~aa~~~-----g-a~lVhiST---------DyVFDG~~---~~~Y~E~D~~~--P~nvYG~sKl~GE~~v 135 (281)
T COG1091 76 VNATGAENLARAAAEV-----G-ARLVHIST---------DYVFDGEK---GGPYKETDTPN--PLNVYGRSKLAGEEAV 135 (281)
T ss_pred hHHHHHHHHHHHHHHh-----C-CeEEEeec---------ceEecCCC---CCCCCCCCCCC--ChhhhhHHHHHHHHHH
Confidence 9999999999999998 3 35788886 77777863 57999999865 6778999999987
Q ss_pred hCCCceEEEeccCceEeCCCCCCCCCCCCCC
Q 030483 145 YSPAITYSVHRSSVIIGASPRSLYXXXXXXX 175 (176)
Q Consensus 145 ~~~g~~~~ivRp~~v~G~~~~~~~~~~~~~~ 175 (176)
+..+-+.+|+|.+|+||..++||...|++++
T Consensus 136 ~~~~~~~~I~Rtswv~g~~g~nFv~tml~la 166 (281)
T COG1091 136 RAAGPRHLILRTSWVYGEYGNNFVKTMLRLA 166 (281)
T ss_pred HHhCCCEEEEEeeeeecCCCCCHHHHHHHHh
Confidence 5667889999999999999888887777665
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.7e-20 Score=153.10 Aligned_cols=146 Identities=18% Similarity=0.189 Sum_probs=98.2
Q ss_pred CCcCCCCC--CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CC--C-------------
Q 030483 1 MEKQDQNP--KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WF--P------------- 54 (176)
Q Consensus 1 ~~~~~~~~--~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~--~------------- 54 (176)
|++...++ +|+|||||||||||++|+++|. ++||+|++++|..... +. .
T Consensus 11 ~~~~~~~~~~~~~IlVtGgtGfIG~~l~~~L~-----~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 85 (370)
T PLN02695 11 LEREPYWPSEKLRICITGAGGFIASHIARRLK-----AEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKG 85 (370)
T ss_pred cCCCCCCCCCCCEEEEECCccHHHHHHHHHHH-----hCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhC
Confidence 33444443 5899999999999999999999 6899999999854211 00 0
Q ss_pred CCcc-------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcc
Q 030483 55 TALV-------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 55 ~~~v-------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p 121 (176)
.+.| ..++...+..|+.++.|++++|++. ++++|+++||+.+|+... ... ...+
T Consensus 86 ~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-----~vk~~V~~SS~~vYg~~~----~~~----~~~~ 152 (370)
T PLN02695 86 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-----GVKRFFYASSACIYPEFK----QLE----TNVS 152 (370)
T ss_pred CCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-----CCCEEEEeCchhhcCCcc----ccC----cCCC
Confidence 0111 0123445678999999999999887 678999999999998421 000 1235
Q ss_pred ccCCCCCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 122 FKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 122 ~~E~~~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
++|+++....|...|.. |.++.. +..+++++++||++||||+.
T Consensus 153 ~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 153 LKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred cCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence 66765211123333443 333332 35689999999999999974
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.3e-20 Score=147.23 Aligned_cols=132 Identities=17% Similarity=0.157 Sum_probs=95.4
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC--------C-----C----------C-Ccc--------
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------F-----P----------T-ALV-------- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~-----~----------~-~~v-------- 58 (176)
+|||||||||||++|+++|+ ++||+|++++|...... . . . +.|
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~ 76 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLL-----AAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSS 76 (314)
T ss_pred eEEEEcCcccHHHHHHHHHH-----hCCCeEEEEeCCCccccccccccceeeecccchHHHHHHHhcCCCEEEEccccCc
Confidence 49999999999999999999 68999999998654311 0 0 0 112
Q ss_pred -c---C-cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC-CCCCCCC
Q 030483 59 -Q---E-SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED-SSRLPFP 132 (176)
Q Consensus 59 -~---~-~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~-~~~~~~~ 132 (176)
. . ++.+.+++|+.++.|++++|++. ++++|++.||..+|+... ...+++|+ .+.. |
T Consensus 77 ~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-----~~~~~v~~ss~~~~~~~~-----------~~~~~~E~~~~~~--p 138 (314)
T COG0451 77 VPDSNASDPAEFLDVNVDGTLNLLEAARAA-----GVKRFVFASSVSVVYGDP-----------PPLPIDEDLGPPR--P 138 (314)
T ss_pred hhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeCCCceECCCC-----------CCCCcccccCCCC--C
Confidence 1 1 23457899999999999999986 688999988777776321 13478888 4433 2
Q ss_pred cchHHHHHHHHh-------hCCCceEEEeccCceEeCCCC
Q 030483 133 NFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 133 ~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~ 165 (176)
...|...|+..| +..+++++++||++||||+..
T Consensus 139 ~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~ 178 (314)
T COG0451 139 LNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDK 178 (314)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCC
Confidence 224554444433 346899999999999999974
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-19 Score=149.34 Aligned_cols=139 Identities=15% Similarity=0.173 Sum_probs=97.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------C----CCC--------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------W----FPT--------------------A 56 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~----~~~--------------------~ 56 (176)
++++||||||+||||++|+++|+ ++||+|++++|+.... . ... +
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 83 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILL-----ERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCD 83 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCC
Confidence 45789999999999999999999 7999999999864310 0 000 0
Q ss_pred cc-------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc-eeecccccCCCccCCCCCCCccccCCCCC
Q 030483 57 LV-------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT-KHYMGPIFDPSLAGQLMPYEVPFKEDSSR 128 (176)
Q Consensus 57 ~v-------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~-~~yg~~~~d~~~~g~~~~~~~p~~E~~~~ 128 (176)
.| ..++.+.+++|+.++.+++++|.+. ++++|+++||. ++||.+. +. ...+++|++..
T Consensus 84 ~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~-----~v~r~V~~SS~~avyg~~~------~~---~~~~~~E~~~~ 149 (342)
T PLN02214 84 GVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEA-----KVKRVVITSSIGAVYMDPN------RD---PEAVVDESCWS 149 (342)
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeccceeeeccCC------CC---CCcccCcccCC
Confidence 01 3356778899999999999999987 57899999985 5887431 00 11357787521
Q ss_pred C----CCCcchHHHHHHHH-----h--hCCCceEEEeccCceEeCCCC
Q 030483 129 L----PFPNFYYELEDVSA-----S--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 129 ~----~~~~~y~~~e~~~~-----~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
. ..+...|...|+.. + +..+++++++||++||||+..
T Consensus 150 ~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~ 197 (342)
T PLN02214 150 DLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQ 197 (342)
T ss_pred ChhhccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence 1 11333454444333 3 356899999999999999863
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.6e-20 Score=156.68 Aligned_cols=131 Identities=17% Similarity=0.136 Sum_probs=94.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------C--C---------------CCCcc------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------W--F---------------PTALV------ 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~---------------~~~~v------ 58 (176)
.|+|||||||||||++|+++|+ ++|++|++++|..... . . +.+.|
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll-----~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~D~ViHlAa~ 194 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLI-----GRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILLEVDQIYHLACP 194 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHH-----HCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccccccCCCEEEECcee
Confidence 3689999999999999999999 6899999998742110 0 0 00111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCC-----C
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS-----S 127 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~-----~ 127 (176)
..++.+.+++|+.+|.+++++|++. ++ ++|++||..+||.+. ..|++|++ |
T Consensus 195 ~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-----g~-r~V~~SS~~VYg~~~------------~~p~~E~~~~~~~p 256 (436)
T PLN02166 195 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-----GA-RFLLTSTSEVYGDPL------------EHPQKETYWGNVNP 256 (436)
T ss_pred ccchhhccCHHHHHHHHHHHHHHHHHHHHHh-----CC-EEEEECcHHHhCCCC------------CCCCCccccccCCC
Confidence 1245677899999999999999987 33 799999999998431 24666763 3
Q ss_pred CCCCCcchHH-----HHHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 128 RLPFPNFYYE-----LEDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 128 ~~~~~~~y~~-----~e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
.. |...|. .|+++.+ +..+++++++||++||||+.
T Consensus 257 ~~--p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~ 298 (436)
T PLN02166 257 IG--ERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRM 298 (436)
T ss_pred CC--CCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCC
Confidence 22 222333 3444443 35689999999999999985
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1e-19 Score=149.32 Aligned_cols=147 Identities=21% Similarity=0.185 Sum_probs=98.8
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------C---CC---------C-----
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------W---FP---------T----- 55 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~---~~---------~----- 55 (176)
|....|+++++||||||+||||++|+++|+ +.|++|++++|+.... . .. +
T Consensus 1 ~~~~~~~~~~~vlItG~~GfIG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 75 (338)
T PLN00198 1 MATLTPTGKKTACVIGGTGFLASLLIKLLL-----QKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFE 75 (338)
T ss_pred CCcccCCCCCeEEEECCchHHHHHHHHHHH-----HCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHH
Confidence 455567778999999999999999999999 6899999888764210 0 00 0
Q ss_pred ------Ccc----------cCcHH-HHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 56 ------ALV----------QESEE-VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 56 ------~~v----------~~~~~-~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
+.| ..++. ..+++|+.++.++++++.+. . ++++|+++||.++|+... ..+ .
T Consensus 76 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~---~-~~~~~v~~SS~~~~g~~~----~~~----~ 143 (338)
T PLN00198 76 APIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKA---K-SVKRVILTSSAAAVSINK----LSG----T 143 (338)
T ss_pred HHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhc---C-CccEEEEeecceeeeccC----CCC----C
Confidence 001 12232 45789999999999999876 2 478999999999997421 001 1
Q ss_pred CccccCCCCC-------CCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 119 EVPFKEDSSR-------LPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 119 ~~p~~E~~~~-------~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
..|++|+... ...|...|.. |.++.+ +.++++++++||++||||+.
T Consensus 144 ~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~ 203 (338)
T PLN00198 144 GLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSL 203 (338)
T ss_pred CceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCc
Confidence 2345554210 0123333433 333333 35689999999999999985
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-19 Score=151.34 Aligned_cols=140 Identities=19% Similarity=0.200 Sum_probs=90.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCC-CcEEEEEecCCCC----------CCC-C--------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPP----------GWF-P--------------------T 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~----------~~~-~--------------------~ 55 (176)
..|+|||||||||||++|+++|+ ++ |++|++++|+... .+. . .
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~-----~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 87 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLM-----TETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMA 87 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHH-----hcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcC
Confidence 34689999999999999999999 55 6999999986421 000 0 0
Q ss_pred Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccc-
Q 030483 56 ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF- 122 (176)
Q Consensus 56 ~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~- 122 (176)
+.| ..++.+.+..|+.++.+++++|++. + ++|+++||..+||....++. . +..|+
T Consensus 88 d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-----~-~r~v~~SS~~vYg~~~~~~~--~----e~~p~~ 155 (386)
T PLN02427 88 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-----N-KRLIHFSTCEVYGKTIGSFL--P----KDHPLR 155 (386)
T ss_pred CEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-----C-CEEEEEeeeeeeCCCcCCCC--C----cccccc
Confidence 111 1123456678999999999999876 3 68999999999984321000 0 11222
Q ss_pred --------cCCCCCC---C--CCcchHHHHH-----HHHh--hCCCceEEEeccCceEeCCC
Q 030483 123 --------KEDSSRL---P--FPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 123 --------~E~~~~~---~--~~~~y~~~e~-----~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+|+.+.. + .+.+.|...| ++.+ +.++++++++||++||||+.
T Consensus 156 ~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 217 (386)
T PLN02427 156 QDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRM 217 (386)
T ss_pred cccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCC
Confidence 2222111 0 1122344333 3332 35689999999999999974
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-19 Score=149.34 Aligned_cols=134 Identities=17% Similarity=0.265 Sum_probs=93.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----CC-------C---C-----------Ccc-----
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WF-------P---T-----------ALV----- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-------~---~-----------~~v----- 58 (176)
|+|||||||||||++|+++|++ ..||+|++++|+.... .. . + +.|
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~----~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa 77 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILE----TTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVA 77 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHh----CCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcc
Confidence 5799999999999999999993 3479999999864210 00 0 0 111
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCC--
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL-- 129 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~-- 129 (176)
..++...+++|+.++.+++++|++. + ++++++||+.+||... ..+++|+++..
T Consensus 78 ~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-----~-~~~v~~SS~~vyg~~~------------~~~~~ee~~~~~~ 139 (347)
T PRK11908 78 IATPATYVKQPLRVFELDFEANLPIVRSAVKY-----G-KHLVFPSTSEVYGMCP------------DEEFDPEASPLVY 139 (347)
T ss_pred cCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-----C-CeEEEEecceeeccCC------------CcCcCcccccccc
Confidence 1234567889999999999999886 4 6899999999998321 23556654311
Q ss_pred -C--CCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCCC
Q 030483 130 -P--FPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 130 -~--~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~ 165 (176)
| .|...|...|...| ..++++++++||+++|||+..
T Consensus 140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~ 185 (347)
T PRK11908 140 GPINKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLD 185 (347)
T ss_pred CcCCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCcc
Confidence 1 23334555444433 357899999999999999853
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-19 Score=154.08 Aligned_cols=139 Identities=19% Similarity=0.116 Sum_probs=89.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC---CCC---------------------------C--CC-C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR---PPP---------------------------G--WF-P 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~---~~~---------------------------~--~~-~ 54 (176)
++|+||||||+||||+||+++|+ ++|++|++++|. ... . +. .
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~-----~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 120 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLS-----KRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVG 120 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHH-----HCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEEC
Confidence 35789999999999999999999 789999998642 100 0 00 0
Q ss_pred C----------------Ccc------------cCc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-EEEEeccceee
Q 030483 55 T----------------ALV------------QES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLR-HVALLTGTKHY 102 (176)
Q Consensus 55 ~----------------~~v------------~~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~-~vv~~Ss~~~y 102 (176)
+ +.| ..+ +...+++|+.++.|++++|++. +++ +|+++||..+|
T Consensus 121 Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-----gv~~~~V~~SS~~vY 195 (442)
T PLN02572 121 DICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-----APDCHLVKLGTMGEY 195 (442)
T ss_pred CCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-----CCCccEEEEecceec
Confidence 0 011 011 1234689999999999999987 454 89999999999
Q ss_pred cccccCCCccCCCCCCCcccc------CCCCC-CCCCcchHHHHHHH-----Hh--hCCCceEEEeccCceEeCCC
Q 030483 103 MGPIFDPSLAGQLMPYEVPFK------EDSSR-LPFPNFYYELEDVS-----AS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 103 g~~~~d~~~~g~~~~~~~p~~------E~~~~-~~~~~~y~~~e~~~-----~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
|.+.. ... ..+++ |+++. ...|...|+..|+. .. +.++++++++||++||||+.
T Consensus 196 G~~~~---~~~-----E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~ 263 (442)
T PLN02572 196 GTPNI---DIE-----EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT 263 (442)
T ss_pred CCCCC---CCc-----ccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence 84310 000 01111 23211 11233334433333 32 45699999999999999985
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-19 Score=143.42 Aligned_cols=134 Identities=19% Similarity=0.137 Sum_probs=98.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC------CCCCCC--------cc---------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP------GWFPTA--------LV--------------- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~------~~~~~~--------~v--------------- 58 (176)
..++|+||||.||||||||+.|+ .+|++|++++.-... .|...+ .+
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm-----~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAa 100 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLM-----TEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAA 100 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHH-----hcCCeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHhhhhhhhcc
Confidence 35799999999999999999999 799999999864321 121111 00
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCC--
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL-- 129 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~-- 129 (176)
.-++-..+..|..++.|++..|++. + +||+++|+++|||.|. ..|..|+.-..
T Consensus 101 pasp~~y~~npvktIktN~igtln~lglakrv-----~-aR~l~aSTseVYgdp~------------~hpq~e~ywg~vn 162 (350)
T KOG1429|consen 101 PASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-----G-ARFLLASTSEVYGDPL------------VHPQVETYWGNVN 162 (350)
T ss_pred CCCCcccccCccceeeecchhhHHHHHHHHHh-----C-ceEEEeecccccCCcc------------cCCCccccccccC
Confidence 2244566788999999999999887 3 7899999999999653 45666665221
Q ss_pred -CCCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCC
Q 030483 130 -PFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 130 -~~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~ 164 (176)
..|..-|..+|.+.| ++.|+.+.|.|+++.|||++
T Consensus 163 pigpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm 205 (350)
T KOG1429|consen 163 PIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRM 205 (350)
T ss_pred cCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCcc
Confidence 133444554444443 57899999999999999997
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.81 E-value=3e-19 Score=147.28 Aligned_cols=137 Identities=12% Similarity=0.155 Sum_probs=92.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C---CC---------C-----------C
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W---FP---------T-----------A 56 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~---~~---------~-----------~ 56 (176)
+++||||||+||||++|+++|+ +.|++|++++|+.... . .. + +
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d 79 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLL-----ERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCT 79 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHH-----HCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCC
Confidence 4789999999999999999999 6899999998864221 0 00 0 0
Q ss_pred cc----------cCcH-HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcc-ccC
Q 030483 57 LV----------QESE-EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP-FKE 124 (176)
Q Consensus 57 ~v----------~~~~-~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p-~~E 124 (176)
.| ..++ .+.+++|+.++.+++++|.+. . .+++|+++||..+|+... ...| ++|
T Consensus 80 ~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~---~-~~~r~v~~SS~~~~~~~~-----------~~~~~~~E 144 (351)
T PLN02650 80 GVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKA---K-TVRRIVFTSSAGTVNVEE-----------HQKPVYDE 144 (351)
T ss_pred EEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhc---C-CceEEEEecchhhcccCC-----------CCCCccCc
Confidence 01 1122 367899999999999999886 2 368999999987775321 0122 455
Q ss_pred CCCC-------CCCCcchHHHHHHH-----Hh--hCCCceEEEeccCceEeCCCC
Q 030483 125 DSSR-------LPFPNFYYELEDVS-----AS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 125 ~~~~-------~~~~~~y~~~e~~~-----~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
++.. .+.+...|...|.. .+ +.++++++++||++||||+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~ 199 (351)
T PLN02650 145 DCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFIS 199 (351)
T ss_pred ccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCC
Confidence 5311 01122234443333 33 367999999999999999753
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-19 Score=141.11 Aligned_cols=128 Identities=23% Similarity=0.273 Sum_probs=97.6
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-----C---------C-------------Ccc-----c
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-----P---------T-------------ALV-----Q 59 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-----~---------~-------------~~v-----~ 59 (176)
|||||||||||++|+++|+ .+|++|+.+.|+...... . + +.| .
T Consensus 1 IlI~GatG~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLL-----KKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHH-----HTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHH-----HcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecc
Confidence 7999999999999999999 799999999998764310 0 0 111 1
Q ss_pred -------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCC
Q 030483 60 -------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 132 (176)
Q Consensus 60 -------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~ 132 (176)
.+..+.++.|+.++.+++++|.+. ++++++++||..+|+.+ ...|++|+++.. |
T Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~sS~~~y~~~------------~~~~~~e~~~~~--~ 136 (236)
T PF01370_consen 76 SSNPESFEDPEEIIEANVQGTRNLLEAAREA-----GVKRFIFLSSASVYGDP------------DGEPIDEDSPIN--P 136 (236)
T ss_dssp SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TTSEEEEEEEGGGGTSS------------SSSSBETTSGCC--H
T ss_pred ccccccccccccccccccccccccccccccc-----ccccccccccccccccc------------cccccccccccc--c
Confidence 134567889999999999999998 56899999999999843 146789998763 3
Q ss_pred cchHHH-----HHHHHh--hCCCceEEEeccCceEeCC
Q 030483 133 NFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 133 ~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~ 163 (176)
...|.. |+++.+ +..+++++++||++||||.
T Consensus 137 ~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 137 LSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTT
T ss_pred cccccccccccccccccccccccccccccccccccccc
Confidence 333443 333333 3458999999999999999
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.81 E-value=3e-19 Score=151.93 Aligned_cols=133 Identities=15% Similarity=0.089 Sum_probs=93.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------C--C---------------CCCcc------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------W--F---------------PTALV------ 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~---------------~~~~v------ 58 (176)
.|+|||||||||||++|+++|+ ++|++|++++|..... . . ..+.|
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll-----~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~l~~~D~ViHlAa~ 193 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLM-----ARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPILLEVDQIYHLACP 193 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHH-----HCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChhhcCCCEEEEeeee
Confidence 4789999999999999999999 7899999998642110 0 0 00111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCC--CC
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR--LP 130 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~--~~ 130 (176)
..++.+.+++|+.++.|++++|++. ++ +++++||+.+||... ..|.+|+... .|
T Consensus 194 ~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-----g~-r~V~~SS~~VYg~~~------------~~p~~E~~~~~~~P 255 (442)
T PLN02206 194 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-----GA-RFLLTSTSEVYGDPL------------QHPQVETYWGNVNP 255 (442)
T ss_pred cchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-----CC-EEEEECChHHhCCCC------------CCCCCccccccCCC
Confidence 1245678899999999999999987 44 799999999997431 2456666411 11
Q ss_pred -CCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 131 -FPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 131 -~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+...|.. |+++.+ +.++++++++||+++|||+.
T Consensus 256 ~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~ 297 (442)
T PLN02206 256 IGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRM 297 (442)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCC
Confidence 12223433 444433 35689999999999999974
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.4e-19 Score=157.61 Aligned_cols=135 Identities=17% Similarity=0.205 Sum_probs=96.1
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----CCC---------C------------Ccc----
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WFP---------T------------ALV---- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~---------~------------~~v---- 58 (176)
.|+|||||||||||+||+++|++ ..||+|++++|..... ... + +.|
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~----~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlA 390 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLR----DDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLV 390 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHh----CCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECc
Confidence 47899999999999999999993 3579999999865321 000 0 011
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCC--
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR-- 128 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~-- 128 (176)
..++.+.+++|+.++.+++++|++. + ++|+++||..+||.. ...+++|+++.
T Consensus 391 a~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-----~-~~~V~~SS~~vyg~~------------~~~~~~E~~~~~~ 452 (660)
T PRK08125 391 AIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-----N-KRIIFPSTSEVYGMC------------TDKYFDEDTSNLI 452 (660)
T ss_pred cccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-----C-CeEEEEcchhhcCCC------------CCCCcCccccccc
Confidence 1234567889999999999999987 4 689999999999832 13467787643
Q ss_pred -CC--CCcchHHHHHH-----HHh--hCCCceEEEeccCceEeCCCC
Q 030483 129 -LP--FPNFYYELEDV-----SAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 129 -~~--~~~~y~~~e~~-----~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.| .|...|...|. +.. +.++++++++||++||||+..
T Consensus 453 ~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~ 499 (660)
T PRK08125 453 VGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD 499 (660)
T ss_pred cCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCcc
Confidence 11 12333444443 333 356899999999999999853
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=142.09 Aligned_cols=141 Identities=17% Similarity=0.146 Sum_probs=97.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------C----CC---------C-----------C
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------W----FP---------T-----------A 56 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~----~~---------~-----------~ 56 (176)
+|++|||||+||||++|+++|+ ++|++|++++|+.... . .. + +
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 79 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLL-----FRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCE 79 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHH-----HCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCC
Confidence 5799999999999999999999 7999999888764321 0 00 0 0
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
.| .+++.+.+++|+.++.++++++.+. . ++++|+++||..+|+++.. ..+ ...+++|
T Consensus 80 ~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~---~-~~~~iv~~SS~~~~~~~~~---~~~----~~~~~~E 148 (325)
T PLN02989 80 TVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKV---S-SVKRVILTSSMAAVLAPET---KLG----PNDVVDE 148 (325)
T ss_pred EEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHc---C-CceEEEEecchhheecCCc---cCC----CCCccCc
Confidence 01 1234567899999999999999875 2 4678999999888764310 001 1346788
Q ss_pred CCCCCCC----CcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 125 DSSRLPF----PNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 125 ~~~~~~~----~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
+++..|. +...|.. |.++.. +.++++++++||+++|||+..
T Consensus 149 ~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~ 200 (325)
T PLN02989 149 TFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQ 200 (325)
T ss_pred CCCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCC
Confidence 8765431 1223433 333333 356899999999999999864
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.2e-19 Score=141.12 Aligned_cols=129 Identities=16% Similarity=0.150 Sum_probs=96.3
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC---------CC--Ccc------------cCcHHHHHH
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF---------PT--ALV------------QESEEVNIF 67 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~---------~~--~~v------------~~~~~~~~~ 67 (176)
+|||||||||||++|+++|+ +.||+|++++|+..+... .. +.| ...+.+.++
T Consensus 1 kilv~G~tG~iG~~l~~~l~-----~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~ 75 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLS-----PEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFA 75 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHH-----hcCCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEECCccccccccccCHHHHHH
Confidence 58999999999999999999 689999999997443211 00 111 123456789
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh---
Q 030483 68 KNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS--- 144 (176)
Q Consensus 68 ~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~--- 144 (176)
+|+.++.++++++.+. ++ +++++||..+|+.. ...|++|+++.. +...|...|...|
T Consensus 76 ~n~~~~~~l~~~~~~~-----~~-~~v~~Ss~~vy~~~------------~~~~~~E~~~~~--~~~~Y~~~K~~~E~~~ 135 (287)
T TIGR01214 76 VNALAPQNLARAAARH-----GA-RLVHISTDYVFDGE------------GKRPYREDDATN--PLNVYGQSKLAGEQAI 135 (287)
T ss_pred HHHHHHHHHHHHHHHc-----CC-eEEEEeeeeeecCC------------CCCCCCCCCCCC--CcchhhHHHHHHHHHH
Confidence 9999999999999887 33 79999999999742 145788988754 3344555554444
Q ss_pred hCCCceEEEeccCceEeCCC
Q 030483 145 YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 145 ~~~g~~~~ivRp~~v~G~~~ 164 (176)
+..+++++++||++||||..
T Consensus 136 ~~~~~~~~ilR~~~v~G~~~ 155 (287)
T TIGR01214 136 RAAGPNALIVRTSWLYGGGG 155 (287)
T ss_pred HHhCCCeEEEEeeecccCCC
Confidence 34578999999999999985
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-18 Score=140.21 Aligned_cols=140 Identities=16% Similarity=0.078 Sum_probs=95.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C---CC--------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W---FP--------------------T 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~---~~--------------------~ 55 (176)
.+++||||||+||||++|+++|+ +.||+|+++.|+.... . .. .
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLL-----LRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGC 78 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCC
Confidence 35799999999999999999999 7899999998865321 0 00 0
Q ss_pred Ccc----------cCcH-HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeec--ccccCCCccCCCCCCCccc
Q 030483 56 ALV----------QESE-EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM--GPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 56 ~~v----------~~~~-~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg--~~~~d~~~~g~~~~~~~p~ 122 (176)
+.| ..++ .+.+++|+.++.++++++++. .++++||++||..+|. .+. .. ...++
T Consensus 79 d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~rvV~~SS~~~~~~~~~~-----~~----~~~~~ 145 (322)
T PLN02986 79 DAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKET----PSVKRVILTSSTAAVLFRQPP-----IE----ANDVV 145 (322)
T ss_pred CEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc----CCccEEEEecchhheecCCcc-----CC----CCCCc
Confidence 001 1122 346889999999999999875 2578999999987653 110 00 12457
Q ss_pred cCCCCCCC----CCcchHHHHHHH-----Hh--hCCCceEEEeccCceEeCCCC
Q 030483 123 KEDSSRLP----FPNFYYELEDVS-----AS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 123 ~E~~~~~~----~~~~y~~~e~~~-----~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
+|++...| .+...|...|.. .+ +.++++++++||++||||...
T Consensus 146 ~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~ 199 (322)
T PLN02986 146 DETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQ 199 (322)
T ss_pred CcccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCC
Confidence 77764322 122334443333 33 356899999999999999753
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.1e-19 Score=145.04 Aligned_cols=136 Identities=23% Similarity=0.190 Sum_probs=96.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------CCC----------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPT----------------------A 56 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~----------------------~ 56 (176)
++|+||||||+||||++|+++|+ +.|++|++++|+..... ... +
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d 77 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLL-----ELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPE 77 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHH-----HCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCC
Confidence 45899999999999999999999 78999999998654210 000 0
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
.| ..++...+++|+.++.++++++.+. + .+++++++||+.+|+.+. ...|++|
T Consensus 78 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~-~~~~iv~~SS~~vyg~~~-----------~~~~~~e 142 (349)
T TIGR02622 78 IVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAI---G-SVKAVVNVTSDKCYRNDE-----------WVWGYRE 142 (349)
T ss_pred EEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhc---C-CCCEEEEEechhhhCCCC-----------CCCCCcc
Confidence 11 2245667899999999999999876 2 367999999999997421 1246777
Q ss_pred CCCCCCCCcchH----HHHHHHHh--hC-------CCceEEEeccCceEeCCC
Q 030483 125 DSSRLPFPNFYY----ELEDVSAS--YS-------PAITYSVHRSSVIIGASP 164 (176)
Q Consensus 125 ~~~~~~~~~~y~----~~e~~~~~--~~-------~g~~~~ivRp~~v~G~~~ 164 (176)
+++..| ...|. ..|.++.. .. .+++++++||++||||+.
T Consensus 143 ~~~~~p-~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~ 194 (349)
T TIGR02622 143 TDPLGG-HDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGD 194 (349)
T ss_pred CCCCCC-CCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCc
Confidence 766442 13332 23444432 11 389999999999999974
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.7e-19 Score=144.37 Aligned_cols=135 Identities=21% Similarity=0.240 Sum_probs=96.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCC-----------CCcc------------cCcHHHHH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP-----------TALV------------QESEEVNI 66 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~-----------~~~v------------~~~~~~~~ 66 (176)
||||||||+||||++|.++|. ..||+|+++.|...+.... -+.| ..+++..+
T Consensus 1 MriLI~GasG~lG~~l~~~l~-----~~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~ 75 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALK-----ERGYEVIATSRSDLDLTDPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAY 75 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHT-----TTSEEEEEESTTCS-TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHh-----hCCCEEEEeCchhcCCCCHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhH
Confidence 589999999999999999999 7999999998886553221 0111 23567789
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh--
Q 030483 67 FKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-- 144 (176)
Q Consensus 67 ~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-- 144 (176)
++|+.++.+++++|.+. + .+++++||..||.+. ...|++|+++.. |...|+..|+..|
T Consensus 76 ~iN~~~~~~la~~~~~~-----~-~~li~~STd~VFdG~------------~~~~y~E~d~~~--P~~~YG~~K~~~E~~ 135 (286)
T PF04321_consen 76 AINVDATKNLAEACKER-----G-ARLIHISTDYVFDGD------------KGGPYTEDDPPN--PLNVYGRSKLEGEQA 135 (286)
T ss_dssp HHHTHHHHHHHHHHHHC-----T--EEEEEEEGGGS-SS------------TSSSB-TTS------SSHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHc-----C-CcEEEeeccEEEcCC------------cccccccCCCCC--CCCHHHHHHHHHHHH
Confidence 99999999999999987 3 378999998887532 256899999865 5566766666655
Q ss_pred -hCCCceEEEeccCceEeCCCCCCCC
Q 030483 145 -YSPAITYSVHRSSVIIGASPRSLYX 169 (176)
Q Consensus 145 -~~~g~~~~ivRp~~v~G~~~~~~~~ 169 (176)
++..-+++|+|++++||+...++++
T Consensus 136 v~~~~~~~~IlR~~~~~g~~~~~~~~ 161 (286)
T PF04321_consen 136 VRAACPNALILRTSWVYGPSGRNFLR 161 (286)
T ss_dssp HHHH-SSEEEEEE-SEESSSSSSHHH
T ss_pred HHHhcCCEEEEecceecccCCCchhh
Confidence 2223489999999999996666544
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-18 Score=140.01 Aligned_cols=139 Identities=18% Similarity=0.155 Sum_probs=94.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------CC----C---------C-----------C
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WF----P---------T-----------A 56 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~----~---------~-----------~ 56 (176)
+++||||||+||||++|+++|+ +.|++|++++|+.... .. . + +
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 78 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLL-----QRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCE 78 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHH-----HCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCC
Confidence 4789999999999999999999 7899999999864320 00 0 0 0
Q ss_pred cc----------cCcHH-HHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee--ecccccCCCccCCCCCCCcccc
Q 030483 57 LV----------QESEE-VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH--YMGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 57 ~v----------~~~~~-~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~--yg~~~~d~~~~g~~~~~~~p~~ 123 (176)
.| ..++. +.+++|+.++.++++++.+. .++++|+++||..+ |++.. .. ...+++
T Consensus 79 ~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~v~~SS~~~~~y~~~~-----~~----~~~~~~ 145 (322)
T PLN02662 79 GVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV----PSVKRVVVTSSMAAVAYNGKP-----LT----PDVVVD 145 (322)
T ss_pred EEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhC----CCCCEEEEccCHHHhcCCCcC-----CC----CCCcCC
Confidence 01 12333 67889999999999999875 25789999999763 54210 00 124678
Q ss_pred CCCCCCCC----CcchHHHHHHHHh-------hCCCceEEEeccCceEeCCCC
Q 030483 124 EDSSRLPF----PNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 124 E~~~~~~~----~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~ 165 (176)
|+.+..|. ....|...|...| +.++++++++||+++|||...
T Consensus 146 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~ 198 (322)
T PLN02662 146 ETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQ 198 (322)
T ss_pred cccCCChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCC
Confidence 87754421 1123444443332 356899999999999999753
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.8e-19 Score=141.22 Aligned_cols=130 Identities=19% Similarity=0.159 Sum_probs=98.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------C--CCC--------------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------W--FPT-------------------- 55 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~--~~~-------------------- 55 (176)
.++||||||+||||+|.+-+|+ .+||.|++++.-.... . ...
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~-----~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~ 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALL-----KRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHH-----hCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc
Confidence 4789999999999999999999 7999999987532211 0 000
Q ss_pred --Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcc
Q 030483 56 --ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 56 --~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p 121 (176)
..| ..++..+.++|+.+|.|+|++++++ +++++++.||+.+||.+. ..|
T Consensus 77 ~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-----~~~~~V~sssatvYG~p~------------~ip 139 (343)
T KOG1371|consen 77 KFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-----NVKALVFSSSATVYGLPT------------KVP 139 (343)
T ss_pred CCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-----CCceEEEecceeeecCcc------------eee
Confidence 000 2345668899999999999999998 589999999999999663 589
Q ss_pred ccCCCCCCCCC-cchHH----HHHHHHh--hCCCceEEEeccCceEe
Q 030483 122 FKEDSSRLPFP-NFYYE----LEDVSAS--YSPAITYSVHRSSVIIG 161 (176)
Q Consensus 122 ~~E~~~~~~~~-~~y~~----~e~~~~~--~~~g~~~~ivRp~~v~G 161 (176)
++|+++.. .| +.|.. .|++... ...++..+.+|.++++|
T Consensus 140 ~te~~~t~-~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~g 185 (343)
T KOG1371|consen 140 ITEEDPTD-QPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIG 185 (343)
T ss_pred ccCcCCCC-CCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccC
Confidence 99999876 33 33333 3333333 35569999999999999
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-18 Score=141.65 Aligned_cols=133 Identities=18% Similarity=0.127 Sum_probs=94.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------C--------CCC------------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------W--------FPT------------------ 55 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~--------~~~------------------ 55 (176)
|+||||||+||||++|+++|+ ..|++|++++|++... . ...
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~ 75 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLL-----EKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIID 75 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHH-----HCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHH
Confidence 589999999999999999999 7899999999874210 0 000
Q ss_pred ----Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCC-CCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 56 ----ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGR-SRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 56 ----~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~-~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
+.| ...+...+++|+.++.+++++|.+. + .+.++++++||+.+||...
T Consensus 76 ~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~---~~~~~~~~v~~SS~~vyg~~~------------ 140 (343)
T TIGR01472 76 EIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL---GLIKSVKFYQASTSELYGKVQ------------ 140 (343)
T ss_pred hCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh---CCCcCeeEEEeccHHhhCCCC------------
Confidence 011 1123456688999999999999986 2 1224899999999998431
Q ss_pred CccccCCCCCCCCCcchHHHHH-----HHHh--hCCCceEEEeccCceEeCCC
Q 030483 119 EVPFKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~~e~-----~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
..|++|+.+.. |...|...| ++.. +..++++++.|+.++|||+.
T Consensus 141 ~~~~~E~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~ 191 (343)
T TIGR01472 141 EIPQNETTPFY--PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRR 191 (343)
T ss_pred CCCCCCCCCCC--CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCC
Confidence 34678887754 333344333 3332 35688999999999999975
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-18 Score=141.19 Aligned_cols=145 Identities=15% Similarity=0.161 Sum_probs=96.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-CCCCC------Cc----------------------c
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GWFPT------AL----------------------V 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-~~~~~------~~----------------------v 58 (176)
.+.++|||||+||+|+||+++|+++ ...++|+.++..+.. .|... .. |
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~---~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~~V 79 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLEN---ELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGAVV 79 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhc---ccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCceE
Confidence 3468999999999999999999942 124899999987752 11100 00 0
Q ss_pred ------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCC
Q 030483 59 ------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 126 (176)
Q Consensus 59 ------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~ 126 (176)
..+++..+++|+.||+|++++|.+. +++++|++||..|+.+... ..+++ +..|++..
T Consensus 80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-----~v~~lIYtSs~~Vvf~g~~--~~n~~---E~~p~p~~- 148 (361)
T KOG1430|consen 80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-----GVKRLIYTSSAYVVFGGEP--IINGD---ESLPYPLK- 148 (361)
T ss_pred EEeccccCccccccchhhheeecchhHHHHHHHHHHh-----CCCEEEEecCceEEeCCee--cccCC---CCCCCccc-
Confidence 2246778999999999999999998 7999999999888743210 01111 12222211
Q ss_pred CCCCCCcchHHHHHHHHh-h-CCCceEEEeccCceEeCCCCC
Q 030483 127 SRLPFPNFYYELEDVSAS-Y-SPAITYSVHRSSVIIGASPRS 166 (176)
Q Consensus 127 ~~~~~~~~y~~~e~~~~~-~-~~g~~~~ivRp~~v~G~~~~~ 166 (176)
...+++.+...+|+++.+ . ..++.++++||..||||+...
T Consensus 149 ~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~ 190 (361)
T KOG1430|consen 149 HIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKR 190 (361)
T ss_pred cccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCcc
Confidence 001122333345666655 2 356999999999999999743
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-18 Score=139.18 Aligned_cols=128 Identities=13% Similarity=0.101 Sum_probs=89.3
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------C---C------------------CCCcc----
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------W---F------------------PTALV---- 58 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~---~------------------~~~~v---- 58 (176)
||||||+||||+||+++|+ +.|++|+++.|+..+. . . +.+.|
T Consensus 2 ilVtGa~GfiG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALN-----DKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG 76 (308)
T ss_pred EEEecCCcHHHHHHHHHHH-----hCCCceEEEecCCCcchHHHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence 8999999999999999999 6899877766543210 0 0 00111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCC
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 132 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~ 132 (176)
..++...++.|+.++.+++++|++. ++ +++++||+.+||.+. ..+++|+++.. |
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-----~~-~~i~~SS~~vyg~~~------------~~~~~E~~~~~--p 136 (308)
T PRK11150 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYGGRT------------DDFIEEREYEK--P 136 (308)
T ss_pred eecCCcCCChHHHHHHHHHHHHHHHHHHHHc-----CC-cEEEEcchHHhCcCC------------CCCCccCCCCC--C
Confidence 1123457889999999999999987 45 599999999998431 23566776544 2
Q ss_pred cchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 133 NFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 133 ~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
...|.. |+++.+ ...+++++++||++||||+.
T Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~ 175 (308)
T PRK11150 137 LNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPRE 175 (308)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCC
Confidence 233443 333333 34689999999999999986
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-18 Score=140.64 Aligned_cols=130 Identities=14% Similarity=0.128 Sum_probs=91.0
Q ss_pred EEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC-CCCC-----------CCCcc-------------cCcHHHHHH
Q 030483 13 LIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PGWF-----------PTALV-------------QESEEVNIF 67 (176)
Q Consensus 13 LVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~-~~~~-----------~~~~v-------------~~~~~~~~~ 67 (176)
||||||||||++|+++|+ ..|++|+.+.++.. +... ..+.| ..++.+.++
T Consensus 1 lItGa~GfiG~~l~~~L~-----~~g~~v~~~~~~~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~ 75 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLE-----ALGFTNLVLRTHKELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIR 75 (306)
T ss_pred CcccCCCcccHHHHHHHH-----hCCCcEEEeeccccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHH
Confidence 699999999999999999 68888776654332 1110 01111 123456788
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCC--CCC-cchHHH-----H
Q 030483 68 KNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL--PFP-NFYYEL-----E 139 (176)
Q Consensus 68 ~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~--~~~-~~y~~~-----e 139 (176)
+|+.++.+++++|++. ++++++++||..+||.. ...|++|+++.. +.| ...|.. |
T Consensus 76 ~n~~~~~~ll~~~~~~-----~~~~~i~~SS~~vyg~~------------~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e 138 (306)
T PLN02725 76 ENLQIQTNVIDAAYRH-----GVKKLLFLGSSCIYPKF------------APQPIPETALLTGPPEPTNEWYAIAKIAGI 138 (306)
T ss_pred HHhHHHHHHHHHHHHc-----CCCeEEEeCceeecCCC------------CCCCCCHHHhccCCCCCCcchHHHHHHHHH
Confidence 9999999999999987 57899999999999842 135788876321 112 333443 3
Q ss_pred HHHHh--hCCCceEEEeccCceEeCCC
Q 030483 140 DVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 140 ~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+++.+ +..+++++++||++||||+.
T Consensus 139 ~~~~~~~~~~~~~~~~~R~~~vyG~~~ 165 (306)
T PLN02725 139 KMCQAYRIQYGWDAISGMPTNLYGPHD 165 (306)
T ss_pred HHHHHHHHHhCCCEEEEEecceeCCCC
Confidence 33332 35689999999999999974
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.78 E-value=5e-18 Score=137.74 Aligned_cols=135 Identities=15% Similarity=0.062 Sum_probs=98.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC----CC--------------------Ccc-------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF----PT--------------------ALV------- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~----~~--------------------~~v------- 58 (176)
|++|||||+||||++|+++|+ ++|++|++++|++..... .. +.|
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLL-----EQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHH-----HCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence 479999999999999999999 689999999997543110 00 001
Q ss_pred ---cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCC-cc
Q 030483 59 ---QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP-NF 134 (176)
Q Consensus 59 ---~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~-~~ 134 (176)
..++.+.+++|+.++.++++++.+. ++++++++||..+|+... ...|++|+++..+.. ..
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~-----------~~~~~~e~~~~~~~~~~~ 139 (328)
T TIGR03466 76 RLWAPDPEEMYAANVEGTRNLLRAALEA-----GVERVVYTSSVATLGVRG-----------DGTPADETTPSSLDDMIG 139 (328)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEechhhcCcCC-----------CCCCcCccCCCCcccccC
Confidence 1245667899999999999999887 578999999999997321 135778887754321 22
Q ss_pred hHHH-----HHHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 135 YYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 135 y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.|.. |+++.+ ...+++++++||+++|||+..
T Consensus 140 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~ 177 (328)
T TIGR03466 140 HYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDI 177 (328)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCC
Confidence 3443 444433 346899999999999999863
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.7e-18 Score=138.11 Aligned_cols=139 Identities=12% Similarity=0.119 Sum_probs=94.1
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC--------CC----CCCC--------------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--------GW----FPTA-------------------- 56 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--------~~----~~~~-------------------- 56 (176)
+++|||||||||||++|+++|+ ++||+|++++|+... .. ....
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll-----~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d 80 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLL-----SRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCS 80 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----hCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCC
Confidence 5789999999999999999999 799999999985211 00 0000
Q ss_pred cc----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeec-ccccCCCccCCCCCCCccccCC
Q 030483 57 LV----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM-GPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 57 ~v----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg-~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
.+ ...+.+.+++|+.++.+++++|.+. . .+++||++||...++ ++. +. ....+++|+
T Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~---~-~v~riV~~SS~~a~~~~~~------~~--~~~~~~~E~ 148 (297)
T PLN02583 81 GLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQT---D-TIEKVVFTSSLTAVIWRDD------NI--STQKDVDER 148 (297)
T ss_pred EEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhc---C-CccEEEEecchHheecccc------cC--CCCCCCCcc
Confidence 00 1124567899999999999999876 2 468999999987653 100 00 013467887
Q ss_pred CCCCCC----CcchHHHHHHHHh-------hCCCceEEEeccCceEeCCC
Q 030483 126 SSRLPF----PNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 126 ~~~~~~----~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~ 164 (176)
++..+. +...|...|.+.| +..+++++++||++||||..
T Consensus 149 ~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~ 198 (297)
T PLN02583 149 SWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSL 198 (297)
T ss_pred cCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCC
Confidence 643210 1113544444433 25689999999999999986
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.2e-18 Score=138.65 Aligned_cols=135 Identities=19% Similarity=0.133 Sum_probs=96.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------------CCC------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------------WFP------------------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------------~~~------------------ 54 (176)
+++++||||||+||||++|+++|+ ++|++|++++|..... ...
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~-----~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~ 77 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLL-----LAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVF 77 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHH
Confidence 456899999999999999999999 6899999998642100 000
Q ss_pred ----CCcc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 55 ----TALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 55 ----~~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
.+.| ..++.+.+++|+.++.+++++|.+. ++++++++||+.+||.. .
T Consensus 78 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~vyg~~------------~ 140 (352)
T PLN02240 78 ASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-----GCKKLVFSSSATVYGQP------------E 140 (352)
T ss_pred HhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEccHHHhCCC------------C
Confidence 0001 1234567899999999999999886 57899999999899732 1
Q ss_pred CccccCCCCCCCCCcchH----HHHHHHHh---hCCCceEEEeccCceEeCCC
Q 030483 119 EVPFKEDSSRLPFPNFYY----ELEDVSAS---YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~----~~e~~~~~---~~~g~~~~ivRp~~v~G~~~ 164 (176)
..|++|+++..+ ...|. ..|.++.. ...+++.+++|++++||+.+
T Consensus 141 ~~~~~E~~~~~~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~ 192 (352)
T PLN02240 141 EVPCTEEFPLSA-TNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHP 192 (352)
T ss_pred CCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCc
Confidence 457889887653 23333 23444433 23578999999999999754
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.9e-18 Score=140.82 Aligned_cols=142 Identities=17% Similarity=0.173 Sum_probs=92.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C---CC--------------------CCcc
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W---FP--------------------TALV 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~--------------------~~~v 58 (176)
.+++||||||+||||++|+++|+ .+|++|++++|+.... + .. .+.|
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLL-----QRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGV 83 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEE
Confidence 35789999999999999999999 6899999998864210 0 00 0111
Q ss_pred ---------c-----CcHHH-----HHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCC
Q 030483 59 ---------Q-----ESEEV-----NIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 119 (176)
Q Consensus 59 ---------~-----~~~~~-----~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~ 119 (176)
. .++.. .++.|+.++.+++++|.+. . ++++|+++||..+||.... .+. ..
T Consensus 84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~---~-~~~~~v~~SS~~vyg~~~~----~~~---~~ 152 (353)
T PLN02896 84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS---K-TVKRVVFTSSISTLTAKDS----NGR---WR 152 (353)
T ss_pred EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc---C-CccEEEEEechhhcccccc----CCC---CC
Confidence 1 12222 2345568999999999876 2 4789999999999984210 010 01
Q ss_pred ccccCCCCCC-------CCCcchHHHHHHH-----Hh--hCCCceEEEeccCceEeCCCC
Q 030483 120 VPFKEDSSRL-------PFPNFYYELEDVS-----AS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 120 ~p~~E~~~~~-------~~~~~y~~~e~~~-----~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.|++|+.+.. ..+...|...|+. .+ +.++++++++||++||||+..
T Consensus 153 ~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~ 212 (353)
T PLN02896 153 AVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLT 212 (353)
T ss_pred CccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcC
Confidence 3566663210 1122234444433 33 357899999999999999763
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.9e-18 Score=139.14 Aligned_cols=138 Identities=12% Similarity=0.044 Sum_probs=92.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEE-EecCCCC-------CC-C--C----------------------CC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRPPP-------GW-F--P----------------------TA 56 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~~~-------~~-~--~----------------------~~ 56 (176)
++|||||||||||++|+++|+ .+|++|+. ++|.... .. . . .+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D 76 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYII-----NETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPD 76 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-----HcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCC
Confidence 589999999999999999999 68887554 4442110 00 0 0 01
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCC----CCCCccEEEEeccceeecccccCCCccCCCCCCCc
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNS----GRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 120 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~----~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~ 120 (176)
.| .+.+.+.+++|+.++.+++++|.+... ...++++++++||.++||... + ...
T Consensus 77 ~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~------~----~~~ 146 (355)
T PRK10217 77 CVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLH------S----TDD 146 (355)
T ss_pred EEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCC------C----CCC
Confidence 11 113456789999999999999976200 012467899999999997321 1 134
Q ss_pred cccCCCCCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 121 PFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 121 p~~E~~~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
|++|+.+.. |...|.. |.++.. +..+++++++||++||||+.
T Consensus 147 ~~~E~~~~~--p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~ 195 (355)
T PRK10217 147 FFTETTPYA--PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH 195 (355)
T ss_pred CcCCCCCCC--CCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 688887654 3333443 333333 45789999999999999986
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.4e-18 Score=150.28 Aligned_cols=137 Identities=16% Similarity=0.082 Sum_probs=94.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCC--CcEEEEEecCCC--C------C--CCC----------------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPP--P------G--WFP---------------------- 54 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~--~------~--~~~---------------------- 54 (176)
.|+|||||||||||++|+++|+ .+ +++|++++|... . . ...
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll-----~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLI-----RNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEG 80 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----HhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcC
Confidence 4789999999999999999999 44 789999987421 0 0 000
Q ss_pred CCcc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccc
Q 030483 55 TALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 55 ~~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~ 122 (176)
.+.| ..++.+.+++|+.+|.+++++|++. + .+++||++||..+||.... . ...+.
T Consensus 81 ~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~-~vkr~I~~SS~~vyg~~~~-----~----~~~~~ 147 (668)
T PLN02260 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT---G-QIRRFIHVSTDEVYGETDE-----D----ADVGN 147 (668)
T ss_pred CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc---C-CCcEEEEEcchHHhCCCcc-----c----cccCc
Confidence 0111 1234567889999999999999987 2 4789999999999984320 0 01234
Q ss_pred cCCCCCCCCCcchH----HHHHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 123 KEDSSRLPFPNFYY----ELEDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 123 ~E~~~~~~~~~~y~----~~e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+|+++..| .+.|. ..|.++.+ +.++++++|+||++||||+.
T Consensus 148 ~E~~~~~p-~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~ 194 (668)
T PLN02260 148 HEASQLLP-TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 194 (668)
T ss_pred cccCCCCC-CCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence 56665442 23333 33555543 35689999999999999986
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-17 Score=135.91 Aligned_cols=132 Identities=15% Similarity=0.141 Sum_probs=93.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------------CC-C----------------CC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------------WF-P----------------TA 56 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------------~~-~----------------~~ 56 (176)
|++|||||+||||++|+++|+ ++|++|++++|..... +. . .+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 75 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLL-----QNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAID 75 (338)
T ss_pred CeEEEECCCChHHHHHHHHHH-----HCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCC
Confidence 479999999999999999999 6899999987642110 00 0 00
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
.| ...+.+.+++|+.++.+++++|++. ++++|+++||..+||.. ...+++|
T Consensus 76 ~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~yg~~------------~~~~~~E 138 (338)
T PRK10675 76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNLIFSSSATVYGDQ------------PKIPYVE 138 (338)
T ss_pred EEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeccHHhhCCC------------CCCcccc
Confidence 01 1123467889999999999999987 57899999999999732 1357888
Q ss_pred CCCCCCCCcchHHH-----HHHHHh--h-CCCceEEEeccCceEeCCC
Q 030483 125 DSSRLPFPNFYYEL-----EDVSAS--Y-SPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 125 ~~~~~~~~~~y~~~-----e~~~~~--~-~~g~~~~ivRp~~v~G~~~ 164 (176)
+++.. .|...|.. |+++.. + ..+++++++|++++|||.+
T Consensus 139 ~~~~~-~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~ 185 (338)
T PRK10675 139 SFPTG-TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHP 185 (338)
T ss_pred ccCCC-CCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCc
Confidence 88752 12333333 444443 2 2478999999999999864
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1e-17 Score=133.10 Aligned_cols=136 Identities=14% Similarity=0.081 Sum_probs=96.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------CC--C---------C-------------Cc
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WF--P---------T-------------AL 57 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~--~---------~-------------~~ 57 (176)
|++|||||.||||++.++.+++++ ..++|+.++.-.-.. .. . + +.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~---~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~ 77 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKH---PDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDA 77 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcC---CCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCe
Confidence 579999999999999999999532 226688887542210 00 0 0 00
Q ss_pred c------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC
Q 030483 58 V------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 58 v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
| ...|+.++++|+.||.+|||++++. ... .+++.+|+-.|||.-.. ....++|+
T Consensus 78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~---~~~-frf~HISTDEVYG~l~~----------~~~~FtE~ 143 (340)
T COG1088 78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKY---WGK-FRFHHISTDEVYGDLGL----------DDDAFTET 143 (340)
T ss_pred EEEechhccccccccChhhhhhcchHHHHHHHHHHHHh---ccc-ceEEEeccccccccccC----------CCCCcccC
Confidence 1 3357788999999999999999998 322 47899999999994321 12357899
Q ss_pred CCCCCCCcchHHHHH-----HHHh--hCCCceEEEeccCceEeCCC
Q 030483 126 SSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 126 ~~~~~~~~~y~~~e~-----~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+|.+| ++.|.++| +++. +.+|++++|.|++|-|||..
T Consensus 144 tp~~P--sSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyq 187 (340)
T COG1088 144 TPYNP--SSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQ 187 (340)
T ss_pred CCCCC--CCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCc
Confidence 98763 33333333 3333 68999999999999999987
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-17 Score=138.68 Aligned_cols=142 Identities=13% Similarity=0.129 Sum_probs=93.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-------------------CC-C--C--C------
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-------------------GW-F--P--T------ 55 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-------------------~~-~--~--~------ 55 (176)
.+++|+||||||+||||++|+++|+ .+||+|+++.|+... .. . . +
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~-----~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~ 124 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLL-----RHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHE 124 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHH
Confidence 3567899999999999999999999 799999988775311 00 0 0 0
Q ss_pred -----Ccc---------cC---cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc--eeecccccCCCccCCCC
Q 030483 56 -----ALV---------QE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT--KHYMGPIFDPSLAGQLM 116 (176)
Q Consensus 56 -----~~v---------~~---~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~--~~yg~~~~d~~~~g~~~ 116 (176)
+.+ .. ......++|+.++.+++++|.+. . ++++||++||. .+||... ...
T Consensus 125 ~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~---~-~v~r~V~~SS~~~~vyg~~~------~~~- 193 (367)
T PLN02686 125 AFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRT---E-SVRKCVFTSSLLACVWRQNY------PHD- 193 (367)
T ss_pred HHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhc---C-CccEEEEeccHHHhcccccC------CCC-
Confidence 000 11 12345678999999999999875 2 58899999985 4776310 000
Q ss_pred CCCccccCCCCCC----CCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 117 PYEVPFKEDSSRL----PFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 117 ~~~~p~~E~~~~~----~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
...+++|++... +.|...|.. |+++.. +.++++++++||++||||+.
T Consensus 194 -~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~ 251 (367)
T PLN02686 194 -LPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGF 251 (367)
T ss_pred -CCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCC
Confidence 012356654221 123333443 444332 35689999999999999975
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.6e-17 Score=135.15 Aligned_cols=137 Identities=18% Similarity=0.094 Sum_probs=94.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC----CC-----------CCC------------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP----GW-----------FPT------------------ 55 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----~~-----------~~~------------------ 55 (176)
+++||||||+||||++|+++|+ ..||+|++++|+... .. ...
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 80 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLL-----SKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLD 80 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHH-----HCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHH
Confidence 5789999999999999999999 689999999886421 00 000
Q ss_pred ----Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCC
Q 030483 56 ----ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 119 (176)
Q Consensus 56 ----~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~ 119 (176)
+.| ..++...+++|+.++.++++++.+..-....+.+|+++||..+||.. .
T Consensus 81 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~-------------~ 147 (340)
T PLN02653 81 DIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGST-------------P 147 (340)
T ss_pred HcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCC-------------C
Confidence 001 12334567899999999999999871000012489999999999842 2
Q ss_pred ccccCCCCCCCCCcchHHHH-----HHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 120 VPFKEDSSRLPFPNFYYELE-----DVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 120 ~p~~E~~~~~~~~~~y~~~e-----~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.|++|+++.. |...|... .++.. ..++++++..|+.++|||+..
T Consensus 148 ~~~~E~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~ 198 (340)
T PLN02653 148 PPQSETTPFH--PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRG 198 (340)
T ss_pred CCCCCCCCCC--CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCC
Confidence 3778888765 33334433 33332 356888899999999999753
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.74 E-value=3e-17 Score=131.20 Aligned_cols=131 Identities=16% Similarity=0.205 Sum_probs=89.3
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC----CC---------------CCcc-------c--C---
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FP---------------TALV-------Q--E--- 60 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~---------------~~~v-------~--~--- 60 (176)
||||||+||||++|+++|+ +.|++|++++|+..... .. .+.| . .
T Consensus 1 vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~~~ 75 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLT-----KDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGEPIADKRWT 75 (292)
T ss_pred CEEEcccchhhHHHHHHHH-----HcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCCCcccccCC
Confidence 6899999999999999999 68999999999765321 00 0111 0 1
Q ss_pred --cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHH-
Q 030483 61 --SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE- 137 (176)
Q Consensus 61 --~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~- 137 (176)
.+.+.+++|+.++.++++++++. +.+..++++.|+..+||.. ...+++|+++.. +..++.
T Consensus 76 ~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~i~~S~~~~yg~~------------~~~~~~E~~~~~--~~~~~~~ 138 (292)
T TIGR01777 76 EERKQEIRDSRIDTTRALVEAIAAA---EQKPKVFISASAVGYYGTS------------EDRVFTEEDSPA--GDDFLAE 138 (292)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhc---CCCceEEEEeeeEEEeCCC------------CCCCcCcccCCC--CCChHHH
Confidence 12456789999999999999987 3222356666666678732 135788887532 232332
Q ss_pred ----HHHHHHh-hCCCceEEEeccCceEeCCC
Q 030483 138 ----LEDVSAS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 138 ----~e~~~~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
.|..+.. +..+++++|+||+++|||..
T Consensus 139 ~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~ 170 (292)
T TIGR01777 139 LCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKG 170 (292)
T ss_pred HHHHHHHHhhhchhcCCceEEEeeeeEECCCc
Confidence 2333322 34589999999999999974
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.5e-17 Score=142.41 Aligned_cols=133 Identities=22% Similarity=0.220 Sum_probs=91.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------C-------------C--------------C
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------W-------------F--------------P 54 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~-------------~--------------~ 54 (176)
|+|||||||||||++|+++|+++ ..|++|++++|+.... + . .
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~---~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~ 77 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDR---RREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGD 77 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhc---CCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcC
Confidence 47999999999999999999931 3789999999964210 0 0 0
Q ss_pred CCcc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC
Q 030483 55 TALV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 55 ~~~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
.+.| ..+..+..++|+.++.+++++|.+. ++++|+++||..+||.. ..+++|+
T Consensus 78 ~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-----~~~~~v~~SS~~v~g~~-------------~~~~~e~ 139 (657)
T PRK07201 78 IDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-----QAATFHHVSSIAVAGDY-------------EGVFRED 139 (657)
T ss_pred CCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-----CCCeEEEEeccccccCc-------------cCccccc
Confidence 0111 2234567789999999999999987 57899999999999732 1234444
Q ss_pred CCCC--CCCcchH----HHHHHHHhhCCCceEEEeccCceEeCCC
Q 030483 126 SSRL--PFPNFYY----ELEDVSASYSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 126 ~~~~--~~~~~y~----~~e~~~~~~~~g~~~~ivRp~~v~G~~~ 164 (176)
+... .....|. ..|+++.+ ..+++++|+||++||||..
T Consensus 140 ~~~~~~~~~~~Y~~sK~~~E~~~~~-~~g~~~~ilRp~~v~G~~~ 183 (657)
T PRK07201 140 DFDEGQGLPTPYHRTKFEAEKLVRE-ECGLPWRVYRPAVVVGDSR 183 (657)
T ss_pred cchhhcCCCCchHHHHHHHHHHHHH-cCCCcEEEEcCCeeeecCC
Confidence 3211 1123332 23333332 5689999999999999875
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.8e-17 Score=137.16 Aligned_cols=133 Identities=20% Similarity=0.170 Sum_probs=93.9
Q ss_pred CCCeEEEE----cCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------------CCCCcccCcH---HHH
Q 030483 8 PKSVALII----GVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------------FPTALVQESE---EVN 65 (176)
Q Consensus 8 ~~~~vLVt----GatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------------~~~~~v~~~~---~~~ 65 (176)
++++|||| |||||||++|+++|+ +.||+|++++|+..... .....+..+. ...
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~-----~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~ 125 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELV-----KAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSK 125 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHH-----HCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhh
Confidence 45789999 999999999999999 68999999999864310 0011111111 111
Q ss_pred ---------HH---HHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCc
Q 030483 66 ---------IF---KNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPN 133 (176)
Q Consensus 66 ---------~~---~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~ 133 (176)
++ .+..++.+++++|++. ++++||++||..+|+.. ...|..|+++..|. .
T Consensus 126 ~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~-----gvkr~V~~SS~~vyg~~------------~~~p~~E~~~~~p~-~ 187 (378)
T PLN00016 126 VAGAGFDVVYDNNGKDLDEVEPVADWAKSP-----GLKQFLFCSSAGVYKKS------------DEPPHVEGDAVKPK-A 187 (378)
T ss_pred hccCCccEEEeCCCCCHHHHHHHHHHHHHc-----CCCEEEEEccHhhcCCC------------CCCCCCCCCcCCCc-c
Confidence 11 1256788999999987 68899999999999732 13467777765432 2
Q ss_pred chHHHHHHHHhhCCCceEEEeccCceEeCCCC
Q 030483 134 FYYELEDVSASYSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 134 ~y~~~e~~~~~~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.+...|.+++ ..+++++++||+++|||...
T Consensus 188 sK~~~E~~l~--~~~l~~~ilRp~~vyG~~~~ 217 (378)
T PLN00016 188 GHLEVEAYLQ--KLGVNWTSFRPQYIYGPGNN 217 (378)
T ss_pred hHHHHHHHHH--HcCCCeEEEeceeEECCCCC
Confidence 4455566654 46899999999999999753
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.7e-16 Score=127.52 Aligned_cols=145 Identities=14% Similarity=0.003 Sum_probs=93.3
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------CCCCCcc--------------
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTALV-------------- 58 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v-------------- 58 (176)
|.-+.+.++|+||||||+||||++|+++|+ ++|++|+...++..+. ....+.|
T Consensus 1 ~~~~~~~~~~kiLVtG~tGfiG~~l~~~L~-----~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~ 75 (298)
T PLN02778 1 SNGTAGSATLKFLIYGKTGWIGGLLGKLCQ-----EQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAGVTGRPNVDW 75 (298)
T ss_pred CCCCCCCCCCeEEEECCCCHHHHHHHHHHH-----hCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCcccCCCCchh
Confidence 445556677899999999999999999999 7899997654332210 0011111
Q ss_pred -cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHH
Q 030483 59 -QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE 137 (176)
Q Consensus 59 -~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~ 137 (176)
..++.+.+++|+.++.+++++|++. +++++ +.||..+|+.... ...+ ...+++|+++..+ +...|.
T Consensus 76 ~~~~p~~~~~~Nv~gt~~ll~aa~~~-----gv~~v-~~sS~~vy~~~~~--~p~~----~~~~~~Ee~~p~~-~~s~Yg 142 (298)
T PLN02778 76 CESHKVETIRANVVGTLTLADVCRER-----GLVLT-NYATGCIFEYDDA--HPLG----SGIGFKEEDTPNF-TGSFYS 142 (298)
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCEE-EEecceEeCCCCC--CCcc----cCCCCCcCCCCCC-CCCchH
Confidence 1245678899999999999999987 56654 4566678863110 0001 1235788776442 334465
Q ss_pred HHHHHHh---hCCCceEEEeccCceEeCCC
Q 030483 138 LEDVSAS---YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 138 ~e~~~~~---~~~g~~~~ivRp~~v~G~~~ 164 (176)
..|+..| ..+ -+..++|+..++|+..
T Consensus 143 ~sK~~~E~~~~~y-~~~~~lr~~~~~~~~~ 171 (298)
T PLN02778 143 KTKAMVEELLKNY-ENVCTLRVRMPISSDL 171 (298)
T ss_pred HHHHHHHHHHHHh-hccEEeeecccCCccc
Confidence 5555555 122 3577899988888753
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.8e-16 Score=128.11 Aligned_cols=128 Identities=14% Similarity=0.128 Sum_probs=88.5
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCCC-CC--------------------------CCCcc-----
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPG-WF--------------------------PTALV----- 58 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~-~~--------------------------~~~~v----- 58 (176)
|||||||||||++|+++|+ +.|+ +|++++|..... +. ..+.|
T Consensus 1 ilItGatG~iG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~ 75 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALN-----ERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGA 75 (314)
T ss_pred CEEeCCcchhhHHHHHHHH-----HcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECcc
Confidence 6999999999999999999 6887 798887653211 00 00111
Q ss_pred -----cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCc
Q 030483 59 -----QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPN 133 (176)
Q Consensus 59 -----~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~ 133 (176)
..++...+++|+.++.+++++|.+. ++ +++++||+.+|+.. ..+++|+++.. .|.
T Consensus 76 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~-~~v~~SS~~vy~~~-------------~~~~~e~~~~~-~p~ 135 (314)
T TIGR02197 76 CSDTTETDGEYMMENNYQYSKRLLDWCAEK-----GI-PFIYASSAATYGDG-------------EAGFREGRELE-RPL 135 (314)
T ss_pred ccCccccchHHHHHHHHHHHHHHHHHHHHh-----CC-cEEEEccHHhcCCC-------------CCCcccccCcC-CCC
Confidence 1244567889999999999999987 44 69999999999732 23556665432 133
Q ss_pred chHHH-----HHHHHh---h-CCCceEEEeccCceEeCCC
Q 030483 134 FYYEL-----EDVSAS---Y-SPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 134 ~y~~~-----e~~~~~---~-~~g~~~~ivRp~~v~G~~~ 164 (176)
..|.. |.++.+ + ..+++++++||++||||+.
T Consensus 136 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~ 175 (314)
T TIGR02197 136 NVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPRE 175 (314)
T ss_pred CHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCC
Confidence 33443 333332 1 3357899999999999985
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.2e-16 Score=129.09 Aligned_cols=145 Identities=13% Similarity=0.048 Sum_probs=91.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecCCCC-C---------CCC----------------------CC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPP-G---------WFP----------------------TA 56 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~-~---------~~~----------------------~~ 56 (176)
|+||||||+||||++|+++|+ ++|++ |++++|.... . ... .+
T Consensus 1 mkilITGgtG~iG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 75 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHII-----NNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPD 75 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHH-----HhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCC
Confidence 479999999999999999999 57765 6656543210 0 000 01
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCC----CCCccEEEEeccceeeccccc-CCCccCCCCCCC
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSG----RSRLRHVALLTGTKHYMGPIF-DPSLAGQLMPYE 119 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~----~~~v~~vv~~Ss~~~yg~~~~-d~~~~g~~~~~~ 119 (176)
.| ..++++.+++|+.++.+++++|.+.+.. ..++++++++||..+||.... +. ..+.. ..
T Consensus 76 ~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~-~~~~~--~~ 152 (352)
T PRK10084 76 AVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDE-VENSE--EL 152 (352)
T ss_pred EEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccc-ccccc--cC
Confidence 11 1134668899999999999999863100 013568999999999984210 00 00000 01
Q ss_pred ccccCCCCCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 120 VPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 120 ~p~~E~~~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+++|+.+.. |...|.. |.++.. +.++++++++|+++||||..
T Consensus 153 ~~~~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~ 202 (352)
T PRK10084 153 PLFTETTAYA--PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYH 202 (352)
T ss_pred CCccccCCCC--CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCc
Confidence 2477887654 3333443 333333 35689999999999999985
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.68 E-value=7e-16 Score=126.42 Aligned_cols=144 Identities=18% Similarity=0.099 Sum_probs=99.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------CCCC--Ccc--------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------WFPT--ALV-------------- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~~~~--~~v-------------- 58 (176)
+++|+||||||+|++|+.+|+. ....+|++++|...+. |.+. +.|
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~----~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL 76 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLD----RSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGL 76 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHh----cCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCC
Confidence 4799999999999999999994 3446899999986631 1100 000
Q ss_pred ------------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 59 ------------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 59 ------------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
..+.++....|+.||..+++.|... ++|.+.|+||++++.... +..+
T Consensus 77 ~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-----k~Kp~~yVSsisv~~~~~--~~~~-- 147 (382)
T COG3320 77 SERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-----KPKPLHYVSSISVGETEY--YSNF-- 147 (382)
T ss_pred CHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-----CCceeEEEeeeeeccccc--cCCC--
Confidence 1234667889999999999999876 678899999999985321 1111
Q ss_pred CCCCCccccCCCCC--------CCCCcchHHHHHHHHh-hCCCceEEEeccCceEeCCCCCCCCC
Q 030483 115 LMPYEVPFKEDSSR--------LPFPNFYYELEDVSAS-YSPAITYSVHRSSVIIGASPRSLYXX 170 (176)
Q Consensus 115 ~~~~~~p~~E~~~~--------~~~~~~y~~~e~~~~~-~~~g~~~~ivRp~~v~G~~~~~~~~~ 170 (176)
....+|+++. .++..+++.+|+++++ ...|++.+|+||+.|.|.+....+|+
T Consensus 148 ----~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~ 208 (382)
T COG3320 148 ----TVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNT 208 (382)
T ss_pred ----ccccccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCcccc
Confidence 1112222322 1233455667888877 34599999999999999998555553
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.9e-16 Score=125.20 Aligned_cols=131 Identities=21% Similarity=0.216 Sum_probs=92.0
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---CC------CC----------------------Ccc-
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WF------PT----------------------ALV- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~------~~----------------------~~v- 58 (176)
+||||||+||||++|+++|+ +.|++|++++|..... .. .. +.+
T Consensus 1 kvlV~GatG~iG~~l~~~l~-----~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv 75 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLL-----ESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVI 75 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHH-----hCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence 58999999999999999999 6899999886532210 00 00 000
Q ss_pred -----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCC
Q 030483 59 -----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 127 (176)
Q Consensus 59 -----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~ 127 (176)
..++.+.+..|+.++.++++++.+. ++++++++||..+|+.+ ...+++|+++
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~ss~~~~g~~------------~~~~~~e~~~ 138 (328)
T TIGR01179 76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-----GVKKFIFSSSAAVYGEP------------SSIPISEDSP 138 (328)
T ss_pred ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-----CCCEEEEecchhhcCCC------------CCCCccccCC
Confidence 1123456788999999999999887 56799999998888732 1346888887
Q ss_pred CCCCCcchH----HHHHHHHh--hC-CCceEEEeccCceEeCCC
Q 030483 128 RLPFPNFYY----ELEDVSAS--YS-PAITYSVHRSSVIIGASP 164 (176)
Q Consensus 128 ~~~~~~~y~----~~e~~~~~--~~-~g~~~~ivRp~~v~G~~~ 164 (176)
..+ ...|. ..|.++.. +. .+++++++||+.+|||.+
T Consensus 139 ~~~-~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~ 181 (328)
T TIGR01179 139 LGP-INPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADP 181 (328)
T ss_pred CCC-CCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCC
Confidence 542 23342 23444433 23 689999999999999965
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.1e-15 Score=123.16 Aligned_cols=133 Identities=13% Similarity=0.041 Sum_probs=90.5
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCC----C-----CC-C----------------------CC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPP----G-----WF-P----------------------TA 56 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~----~-----~~-~----------------------~~ 56 (176)
+|||||||||||++|+++|+ ..| ++|++++|.... . .. . .+
T Consensus 1 ~ilItGatG~iG~~l~~~l~-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d 75 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYIL-----NEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPD 75 (317)
T ss_pred CEEEEcCCchHHHHHHHHHH-----HhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCC
Confidence 58999999999999999999 455 789988763210 0 00 0 01
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
.| ..++...+++|+.++.+++++|.+. ..+ .+++++||..+||... ...+++|
T Consensus 76 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~i~~Ss~~v~g~~~-----------~~~~~~e 140 (317)
T TIGR01181 76 AVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY---WHE-FRFHHISTDEVYGDLE-----------KGDAFTE 140 (317)
T ss_pred EEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc---CCC-ceEEEeeccceeCCCC-----------CCCCcCC
Confidence 11 1134456889999999999999886 222 2699999999998431 1236778
Q ss_pred CCCCCCCCcchH----HHHHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 125 DSSRLPFPNFYY----ELEDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 125 ~~~~~~~~~~y~----~~e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+++..+. ..|. ..|.++.+ ...+++++++||+.+|||..
T Consensus 141 ~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~ 185 (317)
T TIGR01181 141 TTPLAPS-SPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQ 185 (317)
T ss_pred CCCCCCC-CchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCC
Confidence 7765421 2332 23444433 35689999999999999975
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.3e-16 Score=127.75 Aligned_cols=119 Identities=11% Similarity=0.130 Sum_probs=82.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----CCCC--------------------Ccc-------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WFPT--------------------ALV------- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~--------------------~~v------- 58 (176)
|+|||||||||||++|+++|+ ++||+|++++|+..+. .... +.|
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll-----~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQAL-----DEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHH-----HCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence 489999999999999999999 7899999999974321 0000 111
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHH
Q 030483 59 QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL 138 (176)
Q Consensus 59 ~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~ 138 (176)
..++....++|+.++.|++++|++. ++++|+++||...+. .+..+....+...
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~-----gvkr~I~~Ss~~~~~----------------------~~~~~~~~~K~~~ 128 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAA-----KIKRFIFFSILNAEQ----------------------YPYIPLMKLKSDI 128 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHc-----CCCEEEEeccccccc----------------------cCCChHHHHHHHH
Confidence 2233456788999999999999987 688999998742210 0000111223344
Q ss_pred HHHHHhhCCCceEEEeccCceEeC
Q 030483 139 EDVSASYSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 139 e~~~~~~~~g~~~~ivRp~~v~G~ 162 (176)
|+++. ..+++++|+||+.+|+.
T Consensus 129 e~~l~--~~~l~~tilRp~~~~~~ 150 (317)
T CHL00194 129 EQKLK--KSGIPYTIFRLAGFFQG 150 (317)
T ss_pred HHHHH--HcCCCeEEEeecHHhhh
Confidence 55554 57899999999988864
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=2e-15 Score=119.31 Aligned_cols=135 Identities=17% Similarity=0.112 Sum_probs=91.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC----CCC-----CCC----------CC-------------c
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP----PPG-----WFP----------TA-------------L 57 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~----~~~-----~~~----------~~-------------~ 57 (176)
+++|||||.||||++.+..+...+|. +..+.++.-. ... +.. +. .
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~---~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~ 83 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPD---YKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDT 83 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCC---CcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhh
Confidence 78999999999999999999942222 2333332210 110 000 00 0
Q ss_pred c------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC
Q 030483 58 V------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 58 v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
| ..++-+....|+.+|..|+++++.. + +++++|++|+..|||.... ..-..|.
T Consensus 84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~s---g-~i~~fvhvSTdeVYGds~~-----------~~~~~E~ 148 (331)
T KOG0747|consen 84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVS---G-NIRRFVHVSTDEVYGDSDE-----------DAVVGEA 148 (331)
T ss_pred hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhc---c-CeeEEEEecccceecCccc-----------ccccccc
Confidence 0 2345667789999999999999987 3 7999999999999996531 1222377
Q ss_pred CCCCCCCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCC
Q 030483 126 SSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 126 ~~~~~~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~ 164 (176)
+.+. |...|++.|+..| +.++++++++|.++||||++
T Consensus 149 s~~n--PtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q 192 (331)
T KOG0747|consen 149 SLLN--PTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQ 192 (331)
T ss_pred ccCC--CCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCc
Confidence 6654 3333444444433 68899999999999999997
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.2e-15 Score=121.81 Aligned_cols=132 Identities=19% Similarity=0.162 Sum_probs=87.6
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCC---------------C------CC------C------
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG---------------W------FP------T------ 55 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~---------------~------~~------~------ 55 (176)
+|||||||||||++|+++|+ .+| ++|++++|+.... + .. +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~-----~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELL-----RRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHH-----hCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence 58999999999999999999 577 6799999975410 0 00 0
Q ss_pred --------------Ccc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 56 --------------ALV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 56 --------------~~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
+.+ ..+..+..++|+.++.++++++.+. ++++|+++||..+|+...
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-----~~~~~v~iSS~~v~~~~~------ 144 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-----RAKPLHYVSTISVLAAID------ 144 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-----CCceEEEEccccccCCcC------
Confidence 000 1123445679999999999999887 567899999999986321
Q ss_pred CCCCCCCccccCCCCCCC----CCcchH----HHHHHHHh-hCCCceEEEeccCceEeCCC
Q 030483 113 GQLMPYEVPFKEDSSRLP----FPNFYY----ELEDVSAS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~----~~~~y~----~~e~~~~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
..++.|+++..+ ....|. ..|+++.+ ...|++++++||+.+||+..
T Consensus 145 ------~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~ 199 (367)
T TIGR01746 145 ------LSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSY 199 (367)
T ss_pred ------CCCccccccccccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCC
Confidence 112233332211 112232 23444443 34489999999999999843
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.1e-15 Score=116.81 Aligned_cols=132 Identities=17% Similarity=0.190 Sum_probs=94.4
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC----------CC--------CCcc------------cCc
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----------FP--------TALV------------QES 61 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----------~~--------~~~v------------~~~ 61 (176)
|+|||||||||++|+.+|. ..||+|+.++|++.... .. .+.| |..
T Consensus 1 IliTGgTGlIG~~L~~~L~-----~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~~I~~rrWt~ 75 (297)
T COG1090 1 ILITGGTGLIGRALTARLR-----KGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGEPIAERRWTE 75 (297)
T ss_pred CeEeccccchhHHHHHHHH-----hCCCeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCCccccccCCH
Confidence 6899999999999999999 79999999999976521 10 1111 222
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcch----
Q 030483 62 --EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFY---- 135 (176)
Q Consensus 62 --~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y---- 135 (176)
.+++++.-+..|+.|++++.+. ..+++.++..|.+..||.. ....++|+++.. ..|-
T Consensus 76 ~~K~~i~~SRi~~T~~L~e~I~~~---~~~P~~~isaSAvGyYG~~------------~~~~~tE~~~~g--~~Fla~lc 138 (297)
T COG1090 76 KQKEEIRQSRINTTEKLVELIAAS---ETKPKVLISASAVGYYGHS------------GDRVVTEESPPG--DDFLAQLC 138 (297)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhc---cCCCcEEEecceEEEecCC------------CceeeecCCCCC--CChHHHHH
Confidence 2456777788899999999876 5567777766666677732 257899997643 2332
Q ss_pred HHHHHHHHh-hCCCceEEEeccCceEeCCCC
Q 030483 136 YELEDVSAS-YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 136 ~~~e~~~~~-~~~g~~~~ivRp~~v~G~~~~ 165 (176)
+..|+.... ...|.+++++|.++|.|+..+
T Consensus 139 ~~WE~~a~~a~~~gtRvvllRtGvVLs~~GG 169 (297)
T COG1090 139 QDWEEEALQAQQLGTRVVLLRTGVVLSPDGG 169 (297)
T ss_pred HHHHHHHhhhhhcCceEEEEEEEEEecCCCc
Confidence 223443333 456899999999999998865
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.5e-15 Score=122.20 Aligned_cols=124 Identities=19% Similarity=0.114 Sum_probs=84.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCC--------CCC--------------------CCc
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG--------WFP--------------------TAL 57 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~--------~~~--------------------~~~ 57 (176)
++|++|||||+||||++|+++|+ +.| ++|++++|+.... ... .+.
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~-----~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~ 77 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLL-----ENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDY 77 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCE
Confidence 45799999999999999999999 454 7899998864320 000 001
Q ss_pred c------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC
Q 030483 58 V------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 58 v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
| ..++.+.+++|+.++.++++++.+. ++++|+++||...+ .|
T Consensus 78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-----~~~~iV~~SS~~~~-----------------~p---- 131 (324)
T TIGR03589 78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-----GVKRVVALSTDKAA-----------------NP---- 131 (324)
T ss_pred EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEeCCCCC-----------------CC----
Confidence 1 1234568899999999999999987 56799999873211 11
Q ss_pred CCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 126 SSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 126 ~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
..++.......|.++.. ...|++++++||++||||+.
T Consensus 132 --~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~ 173 (324)
T TIGR03589 132 --INLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG 173 (324)
T ss_pred --CCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC
Confidence 11111122333444422 25689999999999999874
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.62 E-value=7.2e-15 Score=126.69 Aligned_cols=88 Identities=17% Similarity=0.128 Sum_probs=65.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC---cEEEEEecCCCCCC-------------------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP---WKVYGAARRPPPGW-------------------------------F 53 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g---~~V~~l~R~~~~~~-------------------------------~ 53 (176)
.+++|||||||||||++|++.|++ .+ -+|+++.|...... .
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~-----~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~ 84 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILR-----VQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISE 84 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHh-----hCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhc
Confidence 468999999999999999999993 32 25788888643100 0
Q ss_pred C----------------C-----------Ccc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEec
Q 030483 54 P----------------T-----------ALV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 97 (176)
Q Consensus 54 ~----------------~-----------~~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~S 97 (176)
. + +.| ..++....++|+.+|.+++++|.+. .++++++++|
T Consensus 85 kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~k~~V~vS 160 (491)
T PLN02996 85 KVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKC----VKVKMLLHVS 160 (491)
T ss_pred CEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEEe
Confidence 0 0 000 2345677899999999999999875 2578999999
Q ss_pred cceeecc
Q 030483 98 GTKHYMG 104 (176)
Q Consensus 98 s~~~yg~ 104 (176)
|..+||.
T Consensus 161 T~~vyG~ 167 (491)
T PLN02996 161 TAYVCGE 167 (491)
T ss_pred eeEEecC
Confidence 9999984
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.60 E-value=4e-15 Score=132.43 Aligned_cols=146 Identities=16% Similarity=0.103 Sum_probs=91.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEE-EEEecCCCC-CC------CCCCcc---------------cCcHHH
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKV-YGAARRPPP-GW------FPTALV---------------QESEEV 64 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V-~~l~R~~~~-~~------~~~~~v---------------~~~~~~ 64 (176)
++|+||||||+||||++|+++|. ++|++| +...+-... .. ...+.| ..++.+
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~-----~~g~~v~~~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~ 453 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCE-----KQGIAYEYGKGRLEDRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVE 453 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHH-----hCCCeEEeeccccccHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHH
Confidence 45789999999999999999999 689998 333321110 00 000111 124567
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh
Q 030483 65 NIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS 144 (176)
Q Consensus 65 ~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~ 144 (176)
.+++|+.++.+++++|++. +++ +++.||..+|+.... ...+ ...|++|+++..+ +...|...|+..|
T Consensus 454 ~~~~N~~gt~~l~~a~~~~-----g~~-~v~~Ss~~v~~~~~~--~~~~----~~~p~~E~~~~~~-~~~~Yg~sK~~~E 520 (668)
T PLN02260 454 TIRANVVGTLTLADVCREN-----GLL-MMNFATGCIFEYDAK--HPEG----SGIGFKEEDKPNF-TGSFYSKTKAMVE 520 (668)
T ss_pred HHHHHhHHHHHHHHHHHHc-----CCe-EEEEcccceecCCcc--cccc----cCCCCCcCCCCCC-CCChhhHHHHHHH
Confidence 7899999999999999998 565 456677788853100 0000 1357889876543 3334555555544
Q ss_pred ---hCCCceEEEeccCceEeCCC---CCCCCCCC
Q 030483 145 ---YSPAITYSVHRSSVIIGASP---RSLYXXXX 172 (176)
Q Consensus 145 ---~~~g~~~~ivRp~~v~G~~~---~~~~~~~~ 172 (176)
..+ .++.++|+.++||... .||+..++
T Consensus 521 ~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~ 553 (668)
T PLN02260 521 ELLREY-DNVCTLRVRMPISSDLSNPRNFITKIS 553 (668)
T ss_pred HHHHhh-hhheEEEEEEecccCCCCccHHHHHHh
Confidence 223 4678889999997542 35544443
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.8e-15 Score=111.82 Aligned_cols=123 Identities=19% Similarity=0.269 Sum_probs=81.6
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC--CCCCcc------------------------cCcHHHH
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALV------------------------QESEEVN 65 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v------------------------~~~~~~~ 65 (176)
|+|+||||++|++|+++|+ ++||+|++++|++.+.. ...+.+ .....
T Consensus 1 I~V~GatG~vG~~l~~~L~-----~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~-- 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLL-----RRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK-- 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHH-----HTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT--
T ss_pred eEEECCCChHHHHHHHHHH-----HCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc--
Confidence 7999999999999999999 68899999999976421 111110 00111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh-
Q 030483 66 IFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS- 144 (176)
Q Consensus 66 ~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~- 144 (176)
....+.++++++++. ++++++++|+..+|.... .....+..+ ....|+.......+
T Consensus 74 ---~~~~~~~~~~a~~~~-----~~~~~v~~s~~~~~~~~~------------~~~~~~~~~---~~~~~~~~~~~~e~~ 130 (183)
T PF13460_consen 74 ---DVDAAKNIIEAAKKA-----GVKRVVYLSSAGVYRDPP------------GLFSDEDKP---IFPEYARDKREAEEA 130 (183)
T ss_dssp ---HHHHHHHHHHHHHHT-----TSSEEEEEEETTGTTTCT------------SEEEGGTCG---GGHHHHHHHHHHHHH
T ss_pred ---ccccccccccccccc-----ccccceeeeccccCCCCC------------ccccccccc---chhhhHHHHHHHHHH
Confidence 266778999999997 688999999988876321 111111111 11334432222222
Q ss_pred -hCCCceEEEeccCceEeCCC
Q 030483 145 -YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 145 -~~~g~~~~ivRp~~v~G~~~ 164 (176)
++.+++|+++||+.+||+..
T Consensus 131 ~~~~~~~~~ivrp~~~~~~~~ 151 (183)
T PF13460_consen 131 LRESGLNWTIVRPGWIYGNPS 151 (183)
T ss_dssp HHHSTSEEEEEEESEEEBTTS
T ss_pred HHhcCCCEEEEECcEeEeCCC
Confidence 34599999999999999974
|
... |
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.7e-15 Score=118.54 Aligned_cols=136 Identities=21% Similarity=0.273 Sum_probs=71.1
Q ss_pred EEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCC---------------CCC-----CCcc-------------
Q 030483 14 IIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPG---------------WFP-----TALV------------- 58 (176)
Q Consensus 14 VtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~---------------~~~-----~~~v------------- 58 (176)
|||||||+|++|+++|+ ..+. +|+++.|..... +.. .+.+
T Consensus 1 lTGaTGflG~~ll~~Ll-----~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG 75 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELL-----RQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG 75 (249)
T ss_dssp EE-TTSHHHHHHHHHHH-----HHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred CcCCCcHHHHHHHHHHH-----cCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence 79999999999999999 4554 899999976320 000 0000
Q ss_pred -------------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 59 -------------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 59 -------------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
..+.++..++|+.+|+++++.|.+. +.++|+|+||..+.+... +
T Consensus 76 L~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-----~~~~~~~iSTa~v~~~~~------~ 144 (249)
T PF07993_consen 76 LSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-----KRKRFHYISTAYVAGSRP------G 144 (249)
T ss_dssp --HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-----S---EEEEEEGGGTTS-T------T
T ss_pred CChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-----cCcceEEeccccccCCCC------C
Confidence 2244567889999999999999865 345899999943333110 1
Q ss_pred CCCCCCcc--ccCCC--CCCCCCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCCCCCC
Q 030483 114 QLMPYEVP--FKEDS--SRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPRSLY 168 (176)
Q Consensus 114 ~~~~~~~p--~~E~~--~~~~~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~~~~ 168 (176)
.. ...+ ..|++ +....++ .|.++|++.| .+.|++++|+||+.|+|.......
T Consensus 145 ~~--~~~~~~~~~~~~~~~~~~~~-gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~ 207 (249)
T PF07993_consen 145 TI--EEKVYPEEEDDLDPPQGFPN-GYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWW 207 (249)
T ss_dssp T----SSS-HHH--EEE--TTSEE--HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS--
T ss_pred cc--cccccccccccchhhccCCc-cHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCcee
Confidence 00 0011 11221 1111223 3554444444 234899999999999995443333
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-14 Score=114.51 Aligned_cols=132 Identities=13% Similarity=0.091 Sum_probs=84.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CCCCC----------------------cc-
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WFPTA----------------------LV- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~----------------------~v- 58 (176)
.+|+||||||||+||++|+++|+ ..||+|+++.|++... ..... .+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLL-----AKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVI 90 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHH-----hCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence 35799999999999999999999 6899999999864321 00000 00
Q ss_pred -----c--CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCC
Q 030483 59 -----Q--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF 131 (176)
Q Consensus 59 -----~--~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~ 131 (176)
. .++...+++|..++.++++++.+. ++++|+++||..+|+... ..+..+.+... .
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~~~iV~iSS~~v~g~~~------------~~~~~~~~~~~-~ 152 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKA-----GVTRFILVSSILVNGAAM------------GQILNPAYIFL-N 152 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHc-----CCCEEEEEccccccCCCc------------ccccCcchhHH-H
Confidence 0 011122456778899999999876 578999999998886321 11222211100 0
Q ss_pred C-cchH----HHHHHHHhhCCCceEEEeccCceEeCCC
Q 030483 132 P-NFYY----ELEDVSASYSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 132 ~-~~y~----~~e~~~~~~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ ..++ ..|+++ +..+++++++||+++++...
T Consensus 153 ~~~~~~~~k~~~e~~l--~~~gi~~~iirpg~~~~~~~ 188 (251)
T PLN00141 153 LFGLTLVAKLQAEKYI--RKSGINYTIVRPGGLTNDPP 188 (251)
T ss_pred HHHHHHHHHHHHHHHH--HhcCCcEEEEECCCccCCCC
Confidence 0 1111 122222 35689999999999998653
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.4e-14 Score=120.25 Aligned_cols=123 Identities=20% Similarity=0.200 Sum_probs=83.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------CCCC--------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------WFPT-------------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~~~~-------------------- 55 (176)
..++|||||||||||++++++|+ ++||+|++++|+.... ....
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll-----~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~ 133 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELV-----RRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE 133 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh
Confidence 35789999999999999999999 6899999999975310 0000
Q ss_pred ----Ccc-------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 56 ----ALV-------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 56 ----~~v-------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
+.| .......+++|..++.++++++++. ++++||++||..+|+ |..+
T Consensus 134 ~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~-----gv~r~V~iSS~~v~~-----------------p~~~ 191 (390)
T PLN02657 134 GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREV-----GAKHFVLLSAICVQK-----------------PLLE 191 (390)
T ss_pred CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHc-----CCCEEEEEeeccccC-----------------cchH
Confidence 011 0111345678999999999999987 678999999875542 1111
Q ss_pred CCCCCCCCcchHHHHHHHHhhCCCceEEEeccCceEeCC
Q 030483 125 DSSRLPFPNFYYELEDVSASYSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 125 ~~~~~~~~~~y~~~e~~~~~~~~g~~~~ivRp~~v~G~~ 163 (176)
........|+.+.+...+++++|+||+++||+-
T Consensus 192 ------~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~ 224 (390)
T PLN02657 192 ------FQRAKLKFEAELQALDSDFTYSIVRPTAFFKSL 224 (390)
T ss_pred ------HHHHHHHHHHHHHhccCCCCEEEEccHHHhccc
Confidence 001122233333322478999999999999853
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.2e-14 Score=124.03 Aligned_cols=113 Identities=19% Similarity=0.146 Sum_probs=78.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-C-------------------CCcc----cCcHHHH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-P-------------------TALV----QESEEVN 65 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~-------------------~~~v----~~~~~~~ 65 (176)
|+||||||+||||++|+++|+ ++||+|++++|.+..... . .+.| .......
T Consensus 1 MkILVTGAaGFIGs~La~~Ll-----~~G~~Vi~ldr~~~~~~~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~~~~ 75 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLI-----AAGHTVSGIAQHPHDALDPRVDYVCASLRNPVLQELAGEADAVIHLAPVDTSAP 75 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHH-----hCCCEEEEEeCChhhcccCCceEEEccCCCHHHHHHhcCCCEEEEcCccCccch
Confidence 379999999999999999999 799999999986432110 0 0111 1111122
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHhh
Q 030483 66 IFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASY 145 (176)
Q Consensus 66 ~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~~ 145 (176)
..+|+.++.|++++|++. ++ +++++||. ||.+ + .|...|.++.
T Consensus 76 ~~vNv~Gt~nLleAA~~~-----Gv-RiV~~SS~--~G~~------------------~---------~~~~aE~ll~-- 118 (699)
T PRK12320 76 GGVGITGLAHVANAAARA-----GA-RLLFVSQA--AGRP------------------E---------LYRQAETLVS-- 118 (699)
T ss_pred hhHHHHHHHHHHHHHHHc-----CC-eEEEEECC--CCCC------------------c---------cccHHHHHHH--
Confidence 358999999999999987 45 58888864 3310 0 1123466554
Q ss_pred CCCceEEEeccCceEeCCC
Q 030483 146 SPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 146 ~~g~~~~ivRp~~v~G~~~ 164 (176)
..+++++|+|++++|||+.
T Consensus 119 ~~~~p~~ILR~~nVYGp~~ 137 (699)
T PRK12320 119 TGWAPSLVIRIAPPVGRQL 137 (699)
T ss_pred hcCCCEEEEeCceecCCCC
Confidence 3568999999999999975
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.7e-13 Score=118.08 Aligned_cols=88 Identities=17% Similarity=0.106 Sum_probs=65.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc---EEEEEecCCCCC---------C----------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW---KVYGAARRPPPG---------W----------------------F 53 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~---~V~~l~R~~~~~---------~----------------------~ 53 (176)
.+++|||||||||||.+|+++|++ .+. +|+++.|..... . .
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr-----~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~ 192 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILR-----TNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLS 192 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHH-----hCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccc
Confidence 368999999999999999999993 332 689998854210 0 0
Q ss_pred C---------CC-----------------cc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecc
Q 030483 54 P---------TA-----------------LV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 98 (176)
Q Consensus 54 ~---------~~-----------------~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss 98 (176)
. ++ .| ..+++...++|+.++.+++++|.+. ..+++++++||
T Consensus 193 Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~----~~lk~fV~vST 268 (605)
T PLN02503 193 KLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKC----KKLKLFLQVST 268 (605)
T ss_pred cEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHc----CCCCeEEEccC
Confidence 0 00 00 2245677899999999999999876 25788999999
Q ss_pred ceeecc
Q 030483 99 TKHYMG 104 (176)
Q Consensus 99 ~~~yg~ 104 (176)
..+||.
T Consensus 269 ayVyG~ 274 (605)
T PLN02503 269 AYVNGQ 274 (605)
T ss_pred ceeecC
Confidence 999984
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.9e-14 Score=111.47 Aligned_cols=116 Identities=16% Similarity=0.154 Sum_probs=78.1
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CC--CC------------------------
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WF--PT------------------------ 55 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~--~~------------------------ 55 (176)
||||||+|.||+.||++|++ .+..+++.++|+.... .. ..
T Consensus 1 VLVTGa~GSIGseL~rql~~----~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~ 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLR----YGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHC----CB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--
T ss_pred CEEEccccHHHHHHHHHHHh----cCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc
Confidence 79999999999999999994 3335799999873210 00 00
Q ss_pred --Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcc
Q 030483 56 --ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 56 --~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p 121 (176)
+.| ..++.+..++|+.||.|++++|.++ ++++|+++||-++.
T Consensus 77 ~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-----~v~~~v~ISTDKAv------------------- 132 (293)
T PF02719_consen 77 KPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-----GVERFVFISTDKAV------------------- 132 (293)
T ss_dssp T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-----T-SEEEEEEECGCS-------------------
T ss_pred CCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEccccccC-------------------
Confidence 000 4578889999999999999999998 79999999985442
Q ss_pred ccCCCCCCCCCcchHHHHHHHHh-----h-----CCCceEEEeccCceEeCCC
Q 030483 122 FKEDSSRLPFPNFYYELEDVSAS-----Y-----SPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 122 ~~E~~~~~~~~~~y~~~e~~~~~-----~-----~~g~~~~ivRp~~v~G~~~ 164 (176)
.|..-++..|.+.| . ..+..++++|.+||+|-+.
T Consensus 133 ---------~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G 176 (293)
T PF02719_consen 133 ---------NPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG 176 (293)
T ss_dssp ---------S--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT
T ss_pred ---------CCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC
Confidence 12333444443433 1 1247899999999999763
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.4e-13 Score=122.90 Aligned_cols=110 Identities=20% Similarity=0.273 Sum_probs=81.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-CC--------------------Ccc---cCcHHHH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PT--------------------ALV---QESEEVN 65 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~--------------------~~v---~~~~~~~ 65 (176)
|+||||||+||||++|+++|+ .+||+|++++|+....+. .. +.| .......
T Consensus 1 MkILVTGATGfIGs~La~~Ll-----~~G~~Vv~l~R~~~~~~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~ 75 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLL-----SQGHEVVGIARHRPDSWPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRN 75 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHH-----HCcCEEEEEECCchhhcccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccch
Confidence 479999999999999999999 799999999997432110 00 011 1111125
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHhh
Q 030483 66 IFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASY 145 (176)
Q Consensus 66 ~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~~ 145 (176)
+++|+.++.+++++|++. ++++||++||. . ....|+++.
T Consensus 76 ~~vNv~GT~nLLeAa~~~-----gvkr~V~iSS~-------------------~---------------K~aaE~ll~-- 114 (854)
T PRK05865 76 DHINIDGTANVLKAMAET-----GTGRIVFTSSG-------------------H---------------QPRVEQMLA-- 114 (854)
T ss_pred HHHHHHHHHHHHHHHHHc-----CCCeEEEECCc-------------------H---------------HHHHHHHHH--
Confidence 689999999999999987 57899998862 1 234566554
Q ss_pred CCCceEEEeccCceEeCCCC
Q 030483 146 SPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 146 ~~g~~~~ivRp~~v~G~~~~ 165 (176)
.++++++++||++||||+..
T Consensus 115 ~~gl~~vILRp~~VYGP~~~ 134 (854)
T PRK05865 115 DCGLEWVAVRCALIFGRNVD 134 (854)
T ss_pred HcCCCEEEEEeceEeCCChH
Confidence 46899999999999999753
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.6e-13 Score=104.63 Aligned_cols=136 Identities=21% Similarity=0.094 Sum_probs=99.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--C------C---CCCcc------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--W------F---PTALV------------------ 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~------~---~~~~v------------------ 58 (176)
|.|++||||-||+-|++|++.|+ +.||+|+++.|+.... . . .+..+
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLL-----ekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~ 75 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLL-----EKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILE 75 (345)
T ss_pred CCceEEEecccCCchHHHHHHHH-----hcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHH
Confidence 46889999999999999999999 8999999999874321 0 0 00000
Q ss_pred -------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCC
Q 030483 59 -------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 119 (176)
Q Consensus 59 -------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~ 119 (176)
++.|....+++..||.++||+++.. +++-.+|..+||+.-||.. ..
T Consensus 76 ~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~---~~~~~rfYQAStSE~fG~v------------~~ 140 (345)
T COG1089 76 EVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRIL---GEKKTRFYQASTSELYGLV------------QE 140 (345)
T ss_pred hcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHh---CCcccEEEecccHHhhcCc------------cc
Confidence 4566777889999999999999987 4434678888999999843 25
Q ss_pred ccccCCCCCCCCCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCCC
Q 030483 120 VPFKEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 120 ~p~~E~~~~~~~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.|.+|+.|.. |.+.|+..|+-.- ..+|+-++.=..+|-=+|.++
T Consensus 141 ~pq~E~TPFy--PrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rg 191 (345)
T COG1089 141 IPQKETTPFY--PRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRG 191 (345)
T ss_pred CccccCCCCC--CCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCc
Confidence 7899999875 5555666665533 356777776666666666553
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.2e-12 Score=113.70 Aligned_cols=127 Identities=14% Similarity=0.104 Sum_probs=84.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-------------------CCC-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------------------FPT------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------------------~~~------------- 55 (176)
.++++|||||+|+||++|+++|+ +.|++|++++|+..... ...
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LL-----k~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI 153 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELL-----KLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI 153 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence 56889999999999999999999 69999999998643210 000
Q ss_pred -------Ccc------c----CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 56 -------ALV------Q----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 56 -------~~v------~----~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
+.| . .++...+++|..++.++++++.+. ++++||++||...+..
T Consensus 154 ~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-----gVgRIV~VSSiga~~~-------------- 214 (576)
T PLN03209 154 GPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-----KVNHFILVTSLGTNKV-------------- 214 (576)
T ss_pred HHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-----CCCEEEEEccchhccc--------------
Confidence 000 0 123445788999999999999887 5789999998654210
Q ss_pred CccccCCCCCCCCCcchHH----HHHHHHhhCCCceEEEeccCceEeCCC
Q 030483 119 EVPFKEDSSRLPFPNFYYE----LEDVSASYSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~----~e~~~~~~~~g~~~~ivRp~~v~G~~~ 164 (176)
..+ +. ... .-..|+. .|+.+ ...|++|++|||++++++..
T Consensus 215 g~p--~~-~~~-sk~~~~~~KraaE~~L--~~sGIrvTIVRPG~L~tp~d 258 (576)
T PLN03209 215 GFP--AA-ILN-LFWGVLCWKRKAEEAL--IASGLPYTIVRPGGMERPTD 258 (576)
T ss_pred Ccc--cc-chh-hHHHHHHHHHHHHHHH--HHcCCCEEEEECCeecCCcc
Confidence 001 11 011 0111222 23333 35799999999999998743
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.1e-12 Score=110.65 Aligned_cols=125 Identities=15% Similarity=0.099 Sum_probs=87.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C-CCC----------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W-FPT---------------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~~~---------------------- 55 (176)
.+|+||||||+|-||+.||+++++ .+.-+++.++|+.... . +..
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~----~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~ 324 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILK----FNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH 324 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHh----cCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC
Confidence 479999999999999999999995 4445788888875431 0 000
Q ss_pred --Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcc
Q 030483 56 --ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 56 --~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p 121 (176)
+.| ..+|.|.+++|+.||.|++++|.+. ++++||++|+-++..
T Consensus 325 kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-----~V~~~V~iSTDKAV~------------------ 381 (588)
T COG1086 325 KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-----GVKKFVLISTDKAVN------------------ 381 (588)
T ss_pred CCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-----CCCEEEEEecCcccC------------------
Confidence 001 4578899999999999999999998 799999999744321
Q ss_pred ccCCCCCCCCCcchHHHHHHHHh--h-CC--CceEEEeccCceEeCCC
Q 030483 122 FKEDSSRLPFPNFYYELEDVSAS--Y-SP--AITYSVHRSSVIIGASP 164 (176)
Q Consensus 122 ~~E~~~~~~~~~~y~~~e~~~~~--~-~~--g~~~~ivRp~~v~G~~~ 164 (176)
|.+-..-.+..+|+++.. + .. +.+.+++|.|||.|.++
T Consensus 382 -----PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG 424 (588)
T COG1086 382 -----PTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG 424 (588)
T ss_pred -----CchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC
Confidence 111000112223554443 1 22 47899999999999874
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.3e-12 Score=122.57 Aligned_cols=145 Identities=13% Similarity=0.107 Sum_probs=90.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCC----cEEEEEecCCCCC---------------C-----CC----------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP----WKVYGAARRPPPG---------------W-----FP---------- 54 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g----~~V~~l~R~~~~~---------------~-----~~---------- 54 (176)
.++|||||||||||++|+++|+ ..+ +.|+++.|..... + ..
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll-----~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~ 1045 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLL-----TRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSK 1045 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHH-----hcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCC
Confidence 4789999999999999999999 344 7899999963210 0 00
Q ss_pred ----------------CCcc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCC
Q 030483 55 ----------------TALV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 109 (176)
Q Consensus 55 ----------------~~~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~ 109 (176)
.+.| ..........|+.++.++++++.+. ++++|+|+||.++|+....
T Consensus 1046 ~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-----~~~~~v~vSS~~v~~~~~~-- 1118 (1389)
T TIGR03443 1046 EKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-----KAKQFSFVSSTSALDTEYY-- 1118 (1389)
T ss_pred ccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-----CCceEEEEeCeeecCcccc--
Confidence 0000 1122334468999999999999876 5789999999999973210
Q ss_pred CccCCC--CCCCccccCCCCCCC---CCcchHHHHHH-----HHh-hCCCceEEEeccCceEeCCCC
Q 030483 110 SLAGQL--MPYEVPFKEDSSRLP---FPNFYYELEDV-----SAS-YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 110 ~~~g~~--~~~~~p~~E~~~~~~---~~~~y~~~e~~-----~~~-~~~g~~~~ivRp~~v~G~~~~ 165 (176)
....+. .....++.|+.+..+ .+...|...|+ +.+ ...|++++|+||++|||++..
T Consensus 1119 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~ 1185 (1389)
T TIGR03443 1119 VNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKT 1185 (1389)
T ss_pred cchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCc
Confidence 000000 000112344432211 11222444444 433 345899999999999999763
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.9e-11 Score=97.96 Aligned_cols=114 Identities=16% Similarity=0.123 Sum_probs=73.0
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-CCCCcc---cCcHH---HHHH----------------
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALV---QESEE---VNIF---------------- 67 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v---~~~~~---~~~~---------------- 67 (176)
+||||||||+||++++++|+ ++||+|++++|++.... .....+ ..+++ +.++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~ 75 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQ-----AASVPFLVASRSSSSSAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVA 75 (285)
T ss_pred CEEEEcCCChHHHHHHHHHH-----hCCCcEEEEeCCCccccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeC
Confidence 48999999999999999999 68999999999875321 111111 11111 1110
Q ss_pred ----HHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHH
Q 030483 68 ----KNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA 143 (176)
Q Consensus 68 ----~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~ 143 (176)
.....+.++++++++. +++|||+.||..++. . .+ .....+.++.
T Consensus 76 ~~~~~~~~~~~~~i~aa~~~-----gv~~~V~~Ss~~~~~---------------~------~~------~~~~~~~~l~ 123 (285)
T TIGR03649 76 PPIPDLAPPMIKFIDFARSK-----GVRRFVLLSASIIEK---------------G------GP------AMGQVHAHLD 123 (285)
T ss_pred CCCCChhHHHHHHHHHHHHc-----CCCEEEEeeccccCC---------------C------Cc------hHHHHHHHHH
Confidence 0124567899999987 689999998743210 0 00 0112244443
Q ss_pred hhCCCceEEEeccCceEeC
Q 030483 144 SYSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 144 ~~~~g~~~~ivRp~~v~G~ 162 (176)
+ ..+++|+++||++++..
T Consensus 124 ~-~~gi~~tilRp~~f~~~ 141 (285)
T TIGR03649 124 S-LGGVEYTVLRPTWFMEN 141 (285)
T ss_pred h-ccCCCEEEEeccHHhhh
Confidence 2 24899999999988854
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1e-11 Score=98.90 Aligned_cols=86 Identities=16% Similarity=0.084 Sum_probs=59.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CCC---------------------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WFP--------------------------- 54 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~--------------------------- 54 (176)
.|++|||||+||||++|+++|+ ++|++|++++|+.... ...
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLL-----ARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGR 76 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999 7899999998864210 000
Q ss_pred CCcc------------c----CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 55 TALV------------Q----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 55 ~~~v------------~----~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
.+.+ . ++....+++|+.++.++++++...+. ..+.++|+++||..
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~~~iv~~sS~~ 137 (276)
T PRK06482 77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLR-RQGGGRIVQVSSEG 137 (276)
T ss_pred CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEEcCcc
Confidence 0101 0 11245678999999999999743210 11357899998753
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1e-11 Score=97.72 Aligned_cols=37 Identities=19% Similarity=0.048 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++++|||||+|+||++++++|+ +.|++|++++|++
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~-----~~G~~v~~~~r~~ 41 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELA-----RAGAAVAIADLNQ 41 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCeEEEEeCCh
Confidence 446899999999999999999999 7999999998876
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.2e-11 Score=93.71 Aligned_cols=133 Identities=16% Similarity=0.064 Sum_probs=81.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------CCC---------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------WFP--------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~--------------------- 54 (176)
++.+++|||||+|+||++|+++|+ ++|++|+.+.|+.... ...
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 78 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLA-----RAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAA 78 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHH
Confidence 445799999999999999999999 7999998877654310 000
Q ss_pred ------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 55 ------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 55 ------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
.+.+ .+.+.+.+++|+.++.++++++..... ..+.++++++||...+.+.
T Consensus 79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~i~~SS~~~~~~~------- 150 (249)
T PRK12825 79 VERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMR-KQRGGRIVNISSVAGLPGW------- 150 (249)
T ss_pred HHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEECccccCCCC-------
Confidence 0000 001245678899999888888753210 1146789999986554210
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCCCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~~~ 165 (176)
+ ....+.......+.+.. + ...+++++++||+.++|+...
T Consensus 151 --------~-----~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~ 195 (249)
T PRK12825 151 --------P-----GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKE 195 (249)
T ss_pred --------C-----CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccc
Confidence 0 00001111111222221 1 246899999999999998753
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2e-11 Score=95.21 Aligned_cols=132 Identities=16% Similarity=0.057 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------------------CCC--------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------------------WFP-------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------------------~~~-------- 54 (176)
++++++|||||+|+||++|+++|+ ++|++|++++|...+. ...
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 78 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLA-----ADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAAL 78 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHH-----HCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 456899999999999999999999 7999999877632110 000
Q ss_pred ---------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHH-hcCCCCCCccEEEEeccceeecccccC
Q 030483 55 ---------TALV----------------QESEEVNIFKNSTMLKNVLSVLV-SSNSGRSRLRHVALLTGTKHYMGPIFD 108 (176)
Q Consensus 55 ---------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~-~~~~~~~~v~~vv~~Ss~~~yg~~~~d 108 (176)
.+.+ .+++.+.+++|..++.++++++. ..+. ....++++++||...+.+.
T Consensus 79 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~iv~~sS~~~~~~~--- 154 (249)
T PRK12827 79 DAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIR-ARRGGRIVNIASVAGVRGN--- 154 (249)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh-cCCCeEEEEECCchhcCCC---
Confidence 0000 11234567899999999999987 2100 1135689999886554210
Q ss_pred CCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 109 PSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 109 ~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ +...+...+...+.+.+. ...+++++++||+++.++..
T Consensus 155 ------------~-----~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~ 198 (249)
T PRK12827 155 ------------R-----GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMA 198 (249)
T ss_pred ------------C-----CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcc
Confidence 0 000111111222222221 24589999999999998864
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.28 E-value=9.7e-12 Score=95.96 Aligned_cols=133 Identities=18% Similarity=0.200 Sum_probs=91.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcE---EEEEecCCCCCCC------------CCCcc------------cCcH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWK---VYGAARRPPPGWF------------PTALV------------QESE 62 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~---V~~l~R~~~~~~~------------~~~~v------------~~~~ 62 (176)
++|||||++|.+|++|.+.+. +.|.+ .+.......+... +..++ ...+
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~-----~q~~~~e~wvf~~skd~DLt~~a~t~~lF~~ekPthVIhlAAmVGGlf~N~~yn 76 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQ-----EQGFDDENWVFIGSKDADLTNLADTRALFESEKPTHVIHLAAMVGGLFHNNTYN 76 (315)
T ss_pred ceEEEecCCchHHHHHHHHHH-----hcCCCCcceEEeccccccccchHHHHHHHhccCCceeeehHhhhcchhhcCCCc
Confidence 689999999999999999999 45552 2222222222110 11111 3456
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCC--CCC-cchHHHH
Q 030483 63 EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL--PFP-NFYYELE 139 (176)
Q Consensus 63 ~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~--~~~-~~y~~~e 139 (176)
..++++|+..-.|++..|-+. +++++++.-|+++|... ...|++|+.... |.| ++.|.-.
T Consensus 77 ldF~r~Nl~indNVlhsa~e~-----gv~K~vsclStCIfPdk------------t~yPIdEtmvh~gpphpsN~gYsyA 139 (315)
T KOG1431|consen 77 LDFIRKNLQINDNVLHSAHEH-----GVKKVVSCLSTCIFPDK------------TSYPIDETMVHNGPPHPSNFGYSYA 139 (315)
T ss_pred hHHHhhcceechhHHHHHHHh-----chhhhhhhcceeecCCC------------CCCCCCHHHhccCCCCCCchHHHHH
Confidence 778999999999999999998 68888887788888521 246899997433 222 4445433
Q ss_pred H-HHH---h---hCCCceEEEeccCceEeCCC
Q 030483 140 D-VSA---S---YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 140 ~-~~~---~---~~~g~~~~ivRp~~v~G~~~ 164 (176)
| ++. . .++|++++.+-|.++|||..
T Consensus 140 Kr~idv~n~aY~~qhg~~~tsviPtNvfGphD 171 (315)
T KOG1431|consen 140 KRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHD 171 (315)
T ss_pred HHHHHHHHHHHHHHhCCceeeeccccccCCCC
Confidence 3 221 1 47899999999999999996
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.6e-11 Score=96.09 Aligned_cols=130 Identities=15% Similarity=0.095 Sum_probs=80.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CCC--------------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WFP-------------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~-------------------------- 54 (176)
+++++|||||+|+||++|+++|+ +.|++|++++|++... ...
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 77 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAAL-----AAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFG 77 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHH-----hCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence 45789999999999999999999 6899999999864310 000
Q ss_pred -CCcc------------c----CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCC
Q 030483 55 -TALV------------Q----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 117 (176)
Q Consensus 55 -~~~v------------~----~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~ 117 (176)
.+.+ . ++..+.+++|+.++.++++++...+. ..+..+|+++||...+.+
T Consensus 78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~~~iv~iSS~~~~~~------------- 143 (277)
T PRK06180 78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMR-ARRRGHIVNITSMGGLIT------------- 143 (277)
T ss_pred CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-ccCCCEEEEEecccccCC-------------
Confidence 0000 0 11245689999999999998654311 113468999988654321
Q ss_pred CCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 118 YEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 118 ~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
.| +..++...+...+.+.+ + ...|++++++||+.+.++.
T Consensus 144 --~~-----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 187 (277)
T PRK06180 144 --MP-----GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDW 187 (277)
T ss_pred --CC-----CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCc
Confidence 00 00001111122222222 1 3468999999999997764
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1e-10 Score=92.77 Aligned_cols=126 Identities=15% Similarity=0.192 Sum_probs=81.1
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--CC---------------------------Ccc-
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--PT---------------------------ALV- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~---------------------------~~v- 58 (176)
+++++||||+|+||++++++|+ ++|++|++++|+...... .. +.+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLA-----RAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 4689999999999999999999 789999999997432110 00 000
Q ss_pred ---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcccc
Q 030483 59 ---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 59 ---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~ 123 (176)
.++....+++|+.++.++++++...+. ..+.++|+++||...+. ..|
T Consensus 79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~---------------~~~-- 140 (270)
T PRK06179 79 NNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMR-AQGSGRIINISSVLGFL---------------PAP-- 140 (270)
T ss_pred ECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCceEEEECCccccC---------------CCC--
Confidence 012345788999998888887644211 11467899998854432 011
Q ss_pred CCCCCCCCCcchHH----HHHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 124 EDSSRLPFPNFYYE----LEDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 124 E~~~~~~~~~~y~~----~e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
....|.. .+.+.+ + ...|++++++||+.+.++..
T Consensus 141 -------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 141 -------YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred -------CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence 0112322 222222 2 35799999999999988754
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.8e-11 Score=93.04 Aligned_cols=36 Identities=28% Similarity=0.330 Sum_probs=32.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+++|||||+||||++++++|+ +.|++|++++|+.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~-----~~g~~v~~~~r~~ 40 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLH-----AAGYRVAIHYHRS 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCC
Confidence 45789999999999999999999 7899999999863
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.5e-11 Score=96.06 Aligned_cols=133 Identities=14% Similarity=-0.023 Sum_probs=82.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------------------CCC------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------------------WFP------------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------------------~~~------------ 54 (176)
++++++|||||+|+||++|+++|+ ++||+|++++|+.... ...
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~-----~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 78 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLA-----ADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGV 78 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 456899999999999999999999 7899999999973210 000
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .+++.+.+++|+.++.++++++...+. ..+.++|+++||...++.
T Consensus 79 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~ii~~ss~~~~~~--------- 148 (251)
T PRK12826 79 EDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALI-RAGGGRIVLTSSVAGPRV--------- 148 (251)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCcEEEEEechHhhcc---------
Confidence 0000 012245678999999888888753210 113568898888644310
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+... .. ++...+...+.++.. ...+++++++||++++||..
T Consensus 149 -------~~~~-~~--~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~ 194 (251)
T PRK12826 149 -------GYPG-LA--HYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMA 194 (251)
T ss_pred -------CCCC-cc--HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchh
Confidence 1000 00 011111112222222 24589999999999999865
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.1e-11 Score=95.63 Aligned_cols=37 Identities=32% Similarity=0.229 Sum_probs=33.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++|||||+|+||++++++|+ ++|++|++++|++.
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~-----~~g~~v~~~~r~~~ 39 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALA-----KEGAKVVIADLNDE 39 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEeCCHH
Confidence 35799999999999999999999 78999999998754
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=7e-11 Score=92.79 Aligned_cols=132 Identities=14% Similarity=0.049 Sum_probs=81.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-CC---------C------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-FP---------T------------ 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~---------~------------ 55 (176)
|+|++|||||+|+||++|+++|+ ++|++|++++|+..+. . .. +
T Consensus 1 ~~k~vlItG~sg~iG~~la~~L~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (256)
T PRK12745 1 MRPVALVTGGRRGIGLGIARALA-----AAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQ 75 (256)
T ss_pred CCcEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 45789999999999999999999 7899999999864320 0 00 0
Q ss_pred ------Ccc------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCC-----CccEEEEeccceeecccc
Q 030483 56 ------ALV------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRS-----RLRHVALLTGTKHYMGPI 106 (176)
Q Consensus 56 ------~~v------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~-----~v~~vv~~Ss~~~yg~~~ 106 (176)
+.+ .+.+++.+++|+.++.++++++...+.... .+.+++++||...+.+
T Consensus 76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-- 153 (256)
T PRK12745 76 AAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV-- 153 (256)
T ss_pred HhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC--
Confidence 000 012244688999999999888765421011 1567899988654321
Q ss_pred cCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 107 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 107 ~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
..+.. .+...+...+.+.+. ..++++++++||+.+.++..
T Consensus 154 ---------------~~~~~---~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~ 198 (256)
T PRK12745 154 ---------------SPNRG---EYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMT 198 (256)
T ss_pred ---------------CCCCc---ccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccc
Confidence 00001 111112222322222 24689999999999998754
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.5e-11 Score=96.07 Aligned_cols=37 Identities=30% Similarity=0.296 Sum_probs=33.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++|||||+|+||.+++++|+ ..|++|++++|+..
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~-----~~G~~Vv~~~R~~~ 61 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALA-----QAGAHVIVPARRPD 61 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 46899999999999999999999 79999999998743
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=9.3e-11 Score=93.53 Aligned_cols=90 Identities=17% Similarity=0.035 Sum_probs=61.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CCC-------------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WFP------------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~------------------------- 54 (176)
|+++++|||||+|+||++++++|+ ++|++|++++|+.... ...
T Consensus 1 ~~~k~vlItGasg~iG~~~a~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 1 MMEKVWFITGASRGFGRAWTEAAL-----ERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHF 75 (275)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence 456799999999999999999999 6899999999874210 000
Q ss_pred --CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 55 --TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 55 --~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
.+.+ .+++++.+++|+.++.++++++...+. ..+.++++++||...+
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~vsS~~~~ 140 (275)
T PRK08263 76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLR-EQRSGHIIQISSIGGI 140 (275)
T ss_pred CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEEcChhhc
Confidence 0000 123456788999998777777643210 0135689999886554
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.8e-10 Score=90.87 Aligned_cols=138 Identities=15% Similarity=0.074 Sum_probs=83.3
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCC--------------------------
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP-------------------------- 54 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~-------------------------- 54 (176)
|+....+.++++|||||+|+||++++++|. +.|++|++++|+.......
T Consensus 1 ~~~~~~~~~k~vlItGas~gIG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (260)
T PRK06523 1 MSFFLELAGKRALVTGGTKGIGAATVARLL-----EAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLERL 75 (260)
T ss_pred CCcCcCCCCCEEEEECCCCchhHHHHHHHH-----HCCCEEEEEeCChhhhcCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 444444567899999999999999999999 7899999999875321100
Q ss_pred --CCcc------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 55 --TALV------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 55 --~~~v------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
.+.+ .++++..+++|+.++.++.+++...+. ..+..+|+++||...+.
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~g~ii~isS~~~~~----------- 143 (260)
T PRK06523 76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMI-ARGSGVIIHVTSIQRRL----------- 143 (260)
T ss_pred CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH-hcCCcEEEEEecccccC-----------
Confidence 0001 012345678999988777666544311 01235788888864432
Q ss_pred CCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
+..+.. .++...+...+.+.+. ...++++.+++|+.|..+.
T Consensus 144 ------~~~~~~--~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~ 189 (260)
T PRK06523 144 ------PLPEST--TAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA 189 (260)
T ss_pred ------CCCCCc--chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence 111110 0111111222222222 3468999999999998875
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=3e-11 Score=93.55 Aligned_cols=131 Identities=14% Similarity=0.014 Sum_probs=82.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C--CC-------------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W--FP------------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~------------------------- 54 (176)
.++++|||||+|+||++++++|+ ++|++|++++|++.+. . ..
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLA-----ARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQF 80 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHH-----HCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999 6899999999965320 0 00
Q ss_pred --CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCC
Q 030483 55 --TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 116 (176)
Q Consensus 55 --~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~ 116 (176)
.+.+ .++..+.+.+|..++.++++++...+. ..++++|+++||...|+..
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~~~~~~----------- 148 (239)
T PRK12828 81 GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALT-ASGGGRIVNIGAGAALKAG----------- 148 (239)
T ss_pred CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHH-hcCCCEEEEECchHhccCC-----------
Confidence 0000 001234577899999888888764311 1146789999987655310
Q ss_pred CCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 117 PYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 117 ~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ .. ..+.......+.+++. ...++++.++||+.++++..
T Consensus 149 ----~---~~--~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~ 192 (239)
T PRK12828 149 ----P---GM--GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPN 192 (239)
T ss_pred ----C---Cc--chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcch
Confidence 0 00 0011111112222221 34689999999999998743
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.7e-11 Score=92.28 Aligned_cols=133 Identities=16% Similarity=0.093 Sum_probs=82.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------C--CC--C------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------W--FP--T------------ 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~--~~--~------------ 55 (176)
|+++++|||||+|+||.+|+++|+ ++|++|++++|++... + .+ +
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLA-----ADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAV 77 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 556899999999999999999999 6899999999975420 0 00 0
Q ss_pred ------Ccc--------c--------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 56 ------ALV--------Q--------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 56 ------~~v--------~--------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
+.+ . +...+.++.|+.+..++++++..... ..++++|+++||...+. +
T Consensus 78 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~ii~~ss~~~~~---------~ 147 (246)
T PRK05653 78 EAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMI-KARYGRIVNISSVSGVT---------G 147 (246)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEECcHHhcc---------C
Confidence 000 0 01244678999999988888864210 11457899988753221 0
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~~~ 165 (176)
. .+..++...+...+.+.+ + ...+++++++||+.++|+...
T Consensus 148 -----~------~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~ 193 (246)
T PRK05653 148 -----N------PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE 193 (246)
T ss_pred -----C------CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh
Confidence 0 000001111122222222 1 345899999999999998753
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.3e-11 Score=95.32 Aligned_cols=34 Identities=26% Similarity=0.221 Sum_probs=31.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++|||||+|+||++|+++|+ ++|++|++++|+.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~-----~~g~~v~~~~r~~ 35 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALA-----AAGANVVVNDLGE 35 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 689999999999999999999 7899999999975
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.1e-11 Score=96.09 Aligned_cols=92 Identities=17% Similarity=0.135 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CC-C----------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WF-P---------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~-~---------------------- 54 (176)
+.++++|||||+|+||.+++++|+ ..|++|++++|+.... .. .
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 78 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALA-----KRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFR 78 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHH
Confidence 356899999999999999999999 6899999998863210 00 0
Q ss_pred -----CCcc------c-----------CcHHHHHHHHHHHHHHHHHHHHhcCCC-CCCccEEEEeccceeec
Q 030483 55 -----TALV------Q-----------ESEEVNIFKNSTMLKNVLSVLVSSNSG-RSRLRHVALLTGTKHYM 103 (176)
Q Consensus 55 -----~~~v------~-----------~~~~~~~~~N~~~t~~ll~a~~~~~~~-~~~v~~vv~~Ss~~~yg 103 (176)
.+.+ . +.++..+++|+.++.++++++...+.. .....+||++||..++.
T Consensus 79 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~ 150 (322)
T PRK07453 79 ALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP 150 (322)
T ss_pred HhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence 0000 0 012456889999988888777654210 11135899999987754
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.8e-10 Score=90.72 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+++++|||||+|+||++|+++|+ ++|++|++++|++
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~-----~~G~~V~~~~r~~ 37 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELA-----KKGYLVIATMRNP 37 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----hCCCEEEEEeCCH
Confidence 456789999999999999999999 7899999999864
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.4e-10 Score=90.72 Aligned_cols=85 Identities=19% Similarity=0.143 Sum_probs=60.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------CCC------C--------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------WFP------T-------------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~------~-------------- 55 (176)
++++++|||||+||||++++++|+ ..|++|++++|+.... ... +
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~-----~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILA-----GAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTA 78 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHH-----HCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 446799999999999999999999 6899999998864210 000 0
Q ss_pred -------Ccc----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 56 -------ALV----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 56 -------~~v----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
+.+ ..++...+++|+.++.++++++...+ .+-.+++++||.
T Consensus 79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~---~~~~~iv~isS~ 136 (248)
T PRK07806 79 REEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLM---PAGSRVVFVTSH 136 (248)
T ss_pred HHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhc---cCCceEEEEeCc
Confidence 001 11234567789999999999998762 122478888874
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.9e-10 Score=91.92 Aligned_cols=37 Identities=30% Similarity=0.486 Sum_probs=33.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|++++|||||+|+||++++++|. +.|++|++++|+..
T Consensus 3 ~~k~vlItGasggiG~~la~~l~-----~~G~~Vi~~~r~~~ 39 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQ-----SDGWRVFATCRKEE 39 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 45789999999999999999999 78999999999753
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.1e-10 Score=87.96 Aligned_cols=129 Identities=13% Similarity=0.047 Sum_probs=79.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCC-------------------------CCcc----
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP-------------------------TALV---- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~-------------------------~~~v---- 58 (176)
..|++|||||+|+||++++++|+ ++|++|++++|+....... .+.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLA-----NLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-----HCCCEEEEEeCCcccccCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 45789999999999999999999 7999999999975432100 0001
Q ss_pred ------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCC
Q 030483 59 ------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 126 (176)
Q Consensus 59 ------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~ 126 (176)
.++....+++|+.++.++.+++...+. ..+..+|+++||...|+.+. ..
T Consensus 77 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~~~------------~~------ 137 (234)
T PRK07577 77 GIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMK-LREQGRIVNICSRAIFGALD------------RT------ 137 (234)
T ss_pred CCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEEccccccCCCC------------ch------
Confidence 012234678888887777666544210 11356899998876554210 00
Q ss_pred CCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 127 SRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 127 ~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
++.......+.+.+ + ...+++++++||+.+..+.
T Consensus 138 ---~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 176 (234)
T PRK07577 138 ---SYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETEL 176 (234)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence 01111111222222 2 3568999999999998764
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.15 E-value=8.8e-11 Score=91.82 Aligned_cols=131 Identities=13% Similarity=-0.001 Sum_probs=81.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------------C---C----C-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------------W---F----P------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------~---~----~------------- 54 (176)
.++++|||||+|+||++++++|+ ++|++|+.++|+.... . . .
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 76 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFA-----EEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQ 76 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999 7999999998864210 0 0 0
Q ss_pred ----CCcc-------------cCc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 55 ----TALV-------------QES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 55 ----~~~v-------------~~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
.+.+ ..+ .++.+++|+.++.++++++...+. ..+..+++++||...|++.
T Consensus 77 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~ii~iss~~~~~~~--------- 146 (250)
T TIGR03206 77 ALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMV-ERGAGRIVNIASDAARVGS--------- 146 (250)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCeEEEEECchhhccCC---------
Confidence 0001 011 234688999999988888764311 1135789999887665321
Q ss_pred CCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ ... .+.....+.+.+.+ + ...+++++++||+.++++..
T Consensus 147 ------~---~~~--~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~ 190 (250)
T TIGR03206 147 ------S---GEA--VYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALL 190 (250)
T ss_pred ------C---CCc--hHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhH
Confidence 0 000 01111111122222 1 23589999999999998843
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.9e-10 Score=90.45 Aligned_cols=130 Identities=14% Similarity=-0.039 Sum_probs=82.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------------C--C--C----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------------W--F--P---------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------~--~--~---------------- 54 (176)
.+|++|||||+|+||++|+++|+ ++||+|++++|+.... . . +
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAA-----RAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALE 78 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 7999999999865310 0 0 0
Q ss_pred ----CCcc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 ----TALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 ----~~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .+.+...+++|+.++..+++++...+. ....+|+++||...+.
T Consensus 79 ~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~~ii~~sS~~~~~---------- 146 (258)
T PRK07890 79 RFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALA--ESGGSIVMINSMVLRH---------- 146 (258)
T ss_pred HcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH--hCCCEEEEEechhhcc----------
Confidence 0000 012245688999999999999876421 1124789888754321
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
|.. ....+.......+.+.+. ...++++.++||+.++++..
T Consensus 147 -------~~~---~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~ 192 (258)
T PRK07890 147 -------SQP---KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPL 192 (258)
T ss_pred -------CCC---CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHH
Confidence 100 000111122222333322 34689999999999999864
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.7e-10 Score=89.89 Aligned_cols=36 Identities=42% Similarity=0.568 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++++||||+|+||++++++|+ +.|++|++++|+.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~-----~~G~~V~~~~r~~ 37 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLA-----AQGYTVYGAARRV 37 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 35799999999999999999999 6899999999874
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.3e-10 Score=89.37 Aligned_cols=37 Identities=16% Similarity=0.074 Sum_probs=33.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~-----~~G~~v~~~~r~~ 42 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAA-----AEGARVVLVDRSE 42 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCch
Confidence 456899999999999999999999 7999999999863
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.9e-10 Score=87.53 Aligned_cols=36 Identities=25% Similarity=0.250 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||+|+||++++++|+ +.|++|+.++|++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~-----~~g~~v~~~~r~~ 38 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAIL-----EAGGIVIAADIDK 38 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEecCh
Confidence 46899999999999999999999 7999999998864
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.13 E-value=6.4e-10 Score=87.14 Aligned_cols=132 Identities=11% Similarity=0.019 Sum_probs=82.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--------C--------------------CCcc
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------P--------------------TALV 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------~--------------------~~~v 58 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+...... + .+.+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFV-----EAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEecchhhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 456899999999999999999999 799999999987611000 0 0011
Q ss_pred ----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccc
Q 030483 59 ----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 59 ----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~ 122 (176)
.+++...+++|+.++.++++++...+. ..+..+|+++||..... |.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~~ss~~~~~-----------------~~ 142 (252)
T PRK08220 81 VNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFR-RQRSGAIVTVGSNAAHV-----------------PR 142 (252)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hCCCCEEEEECCchhcc-----------------CC
Confidence 112345688999999898888765311 11235788888753321 11
Q ss_pred cCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 123 KEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 123 ~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
.... .+...+...+.+.+. ...++++.+++|+.++++..
T Consensus 143 ~~~~---~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~ 186 (252)
T PRK08220 143 IGMA---AYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQ 186 (252)
T ss_pred CCCc---hhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhh
Confidence 0000 011112222322222 34689999999999999853
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.2e-10 Score=89.25 Aligned_cols=131 Identities=15% Similarity=0.016 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------C-C-C---------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------W-F-P--------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~-~-~--------------- 54 (176)
+.++++|||||+|+||.+|+++|+ +.|++|++++|++.+. + . +
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALA-----KEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLK 79 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 445789999999999999999999 7999999999875310 0 0 0
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .++..+.+++|+.++.++++++...+. ..+.++++++||...+.+.
T Consensus 80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~ss~~~~~~~-------- 150 (239)
T PRK07666 80 NELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMI-ERQSGDIINISSTAGQKGA-------- 150 (239)
T ss_pred HHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCcEEEEEcchhhccCC--------
Confidence 0000 011245688999998888888765311 1134678888875443210
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHHHH----HHh-hCCCceEEEeccCceEeCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELEDV----SAS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e~~----~~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ ....+.......+.+ ..+ ...+++++++||+.+..+.
T Consensus 151 -------~-----~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~ 193 (239)
T PRK07666 151 -------A-----VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDM 193 (239)
T ss_pred -------C-----CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcc
Confidence 0 000001111111111 122 3568999999999998774
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.5e-10 Score=90.50 Aligned_cols=128 Identities=16% Similarity=0.077 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC----------C--CC--C------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP----------G--WF--P------------------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----------~--~~--~------------------ 54 (176)
++++++|||||+|+||++++++|+ +.|++|++++|+... . +. .
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFL-----AEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 456899999999999999999999 799999999886321 0 00 0
Q ss_pred --CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc-eeecccccCCCccCCC
Q 030483 55 --TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT-KHYMGPIFDPSLAGQL 115 (176)
Q Consensus 55 --~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~-~~yg~~~~d~~~~g~~ 115 (176)
.+.+ .+++.+.+++|+.++.++++++...+. ...+++++||. ..|+.
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~~i~~~S~~~~~~~----------- 144 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLA---NPASIVLNGSINAHIGM----------- 144 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh---cCCEEEEEechHhccCC-----------
Confidence 0001 112345789999999999999986421 12356666553 33321
Q ss_pred CCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
| +.. ++...+...+.+.+ + ...++++.++||+.+++|.
T Consensus 145 -----~--~~~---~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~ 187 (249)
T PRK06500 145 -----P--NSS---VYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL 187 (249)
T ss_pred -----C--Ccc---HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence 0 000 01111222333332 2 3468999999999999873
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.4e-10 Score=86.51 Aligned_cols=130 Identities=12% Similarity=0.042 Sum_probs=80.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCCCC---CC-----------------------CCcc--
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW---FP-----------------------TALV-- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~---~~-----------------------~~~v-- 58 (176)
..+++|||||+|+||++++++|+ +.|+ .|++++|+..+.. .. .+.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~-----~~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 79 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLL-----ARGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVN 79 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 45789999999999999999999 6899 8999998754211 00 0001
Q ss_pred ---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcccc
Q 030483 59 ---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 59 ---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~ 123 (176)
.+++.+.+++|+.++.++++++..... ..+..+++++||...|.+. +
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~~sS~~~~~~~---------------~-- 141 (238)
T PRK08264 80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLA-ANGGGAIVNVLSVLSWVNF---------------P-- 141 (238)
T ss_pred CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEEcChhhccCC---------------C--
Confidence 012234678999999999888764310 1134678888876544210 0
Q ss_pred CCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 124 EDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 124 E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
...++...+...+.+... ...+++++++||+.+.++.
T Consensus 142 ---~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 142 ---NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred ---CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence 000011111222322222 3458999999999997764
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.8e-10 Score=87.45 Aligned_cols=38 Identities=18% Similarity=0.064 Sum_probs=34.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++.+++|||||+|+||++++++|+ ++|++|++++|+.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~-----~~g~~V~~~~r~~ 45 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFA-----EAGARVHVCDVSE 45 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 3457899999999999999999999 7999999999864
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.1e-10 Score=89.42 Aligned_cols=133 Identities=14% Similarity=0.051 Sum_probs=83.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-----CC-------------CCcc
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-----FP-------------TALV 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-----~~-------------~~~v 58 (176)
+.+++++||||+|+||+++++.|+ +.||+|++++|+.... . .. .+.+
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~v 81 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALA-----QRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGL 81 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 456899999999999999999999 6899999999875210 0 00 0111
Q ss_pred ----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccc
Q 030483 59 ----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 59 ----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~ 122 (176)
.++.++.+++|+.++.++++++.+.+.......+|+++||...|... +
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------~- 145 (245)
T PRK07060 82 VNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL---------------P- 145 (245)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC---------------C-
Confidence 01234567799999999998887641101112579999886544210 0
Q ss_pred cCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 123 KEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 123 ~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
... .+.......+.+.+. ...+++++.+||+.++++..
T Consensus 146 -~~~---~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~ 188 (245)
T PRK07060 146 -DHL---AYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMA 188 (245)
T ss_pred -CCc---HhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchh
Confidence 000 011112222333322 24589999999999998864
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=2e-10 Score=90.41 Aligned_cols=131 Identities=11% Similarity=0.044 Sum_probs=81.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C---------C-C--------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W---------F-P-------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~---------~-~-------------- 54 (176)
.+|++|||||+|+||++++++|+ ++|++|+.++|+.... . + .
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLA-----QAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA 83 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 7899999999874310 0 0 0
Q ss_pred ----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 55 ----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 55 ----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
.+.+ .+..++.+.+|+.++.++++++.+.+. ..+.++|+++||...+.
T Consensus 84 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~iss~~~~~----------- 151 (255)
T PRK07523 84 EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMI-ARGAGKIINIASVQSAL----------- 151 (255)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HhCCeEEEEEccchhcc-----------
Confidence 0000 111245678999999999988876421 11346899988753321
Q ss_pred CCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+.. ...++...+...+.+.+. ..+|+++.++||+.+.++..
T Consensus 152 ------~~~---~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~ 197 (255)
T PRK07523 152 ------ARP---GIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLN 197 (255)
T ss_pred ------CCC---CCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchh
Confidence 100 000011111122222221 35689999999999998853
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.5e-10 Score=86.97 Aligned_cols=36 Identities=19% Similarity=0.121 Sum_probs=32.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++++|||||+|+||++++++|+ ..|++|++++|++
T Consensus 1 m~~~vlVtGasg~iG~~ia~~l~-----~~G~~v~~~~r~~ 36 (257)
T PRK09291 1 MSKTILITGAGSGFGREVALRLA-----RKGHNVIAGVQIA 36 (257)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 35789999999999999999999 7999999999864
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.9e-10 Score=86.22 Aligned_cols=130 Identities=12% Similarity=-0.024 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE-ecCCCCC----------CC----------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPG----------WF---------------------- 53 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~----------~~---------------------- 53 (176)
+++++++||||+|+||++++++|+ ++|++|+++ .|+..+. ..
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~-----~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~ 78 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLA-----NDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQL 78 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHH
Confidence 345799999999999999999999 689998775 4542110 00
Q ss_pred -----------CCCcc------------cC-c---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccc
Q 030483 54 -----------PTALV------------QE-S---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPI 106 (176)
Q Consensus 54 -----------~~~~v------------~~-~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~ 106 (176)
..+.+ .+ + ....+++|+.++.++++++...+ ....+++++||...+...
T Consensus 79 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~~v~~sS~~~~~~~- 154 (254)
T PRK12746 79 KNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLL---RAEGRVINISSAEVRLGF- 154 (254)
T ss_pred HHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh---hcCCEEEEECCHHhcCCC-
Confidence 00111 01 1 13456799999999999987641 123578888886554310
Q ss_pred cCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 107 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 107 ~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ ... .+.......+.+.+. ...++++++++|+.+.++-.
T Consensus 155 --------------~--~~~---~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~ 198 (254)
T PRK12746 155 --------------T--GSI---AYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDIN 198 (254)
T ss_pred --------------C--CCc---chHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcch
Confidence 0 000 111122233333222 24689999999999988743
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.1e-10 Score=90.57 Aligned_cols=129 Identities=13% Similarity=0.077 Sum_probs=78.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CCC-----------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFP----------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~----------------------- 54 (176)
.++++|||||+|+||++++++|+ ++|++|++++|+.... ...
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELA-----AAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEE 83 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999 6899999888754210 000
Q ss_pred ----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 55 ----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 55 ----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
.+.+ .++..+.+++|+.++.++++++...+. ..+..+|+++||...|..
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~-~~~~g~iv~isS~~~~~~---------- 152 (274)
T PRK07775 84 ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMI-ERRRGDLIFVGSDVALRQ---------- 152 (274)
T ss_pred hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCceEEEECChHhcCC----------
Confidence 0000 012234578999999888888754210 113457999988655431
Q ss_pred CCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~ 162 (176)
.| ...++...+...+.+... ...|++++++||+.+..+
T Consensus 153 -----~~-----~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~ 195 (274)
T PRK07775 153 -----RP-----HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTG 195 (274)
T ss_pred -----CC-----CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCc
Confidence 11 000111222333333332 235899999999987554
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.5e-10 Score=89.15 Aligned_cols=131 Identities=12% Similarity=0.030 Sum_probs=80.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CC-C------C-------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WF-P------T------------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~------~------------------- 55 (176)
+++++|||||+|+||++++++|+ +.|++|+.++|+.... .. . +
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYL-----AEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFG 79 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35789999999999999999999 7999999998875320 00 0 0
Q ss_pred --Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCC
Q 030483 56 --ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 117 (176)
Q Consensus 56 --~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~ 117 (176)
+.+ .+++++.+++|+.++.++++++...+.....-.+|+++||.....
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-------------- 145 (257)
T PRK07067 80 GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR-------------- 145 (257)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC--------------
Confidence 000 112345688999999999999865410000114788888743210
Q ss_pred CCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 118 YEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 118 ~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
..| +...+.......+.+.+ + ...++++.++||+.++++.
T Consensus 146 -~~~-----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 190 (257)
T PRK07067 146 -GEA-----LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPM 190 (257)
T ss_pred -CCC-----CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchh
Confidence 000 10011112222222222 2 3578999999999999975
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=3e-10 Score=88.90 Aligned_cols=36 Identities=22% Similarity=0.192 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++|||||+|+||++|+++|+ ++|++|++++|+.
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~-----~~G~~v~~~~r~~ 39 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFA-----REGARVVVADRDA 39 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHH-----HCCCeEEEecCCH
Confidence 46799999999999999999999 6899999998874
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.7e-10 Score=88.41 Aligned_cols=128 Identities=13% Similarity=-0.017 Sum_probs=81.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CCC---------C-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFP---------T------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~---------~------------- 55 (176)
+++++|||||+|+||++++++|+ +.|++|++++|..... ... +
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALA-----REGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVS 79 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999 6899999999874310 000 0
Q ss_pred -----Ccc------c-------------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCc
Q 030483 56 -----ALV------Q-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 56 -----~~v------~-------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
+.+ . +...+.+++|+.++.++++++...+. ..+.++|+++||...|..
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~------- 151 (250)
T PRK07774 80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMA-KRGGGAIVNQSSTAAWLY------- 151 (250)
T ss_pred HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-HhCCcEEEEEecccccCC-------
Confidence 001 1 11234578999999999988876421 112358999988655420
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
. .++.......+.+.+. ...++++++++|+.+..+..
T Consensus 152 -------~---------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~ 193 (250)
T PRK07774 152 -------S---------NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEAT 193 (250)
T ss_pred -------c---------cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccc
Confidence 0 0111122223333322 24589999999998876654
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.6e-09 Score=87.61 Aligned_cols=128 Identities=13% Similarity=0.001 Sum_probs=80.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------CC-C---------C-----------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------WF-P---------T----------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~-~---------~----------- 55 (176)
.++++|||||+|+||++++++|+ +.|++|+.+.|+.... .. . +
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~-----~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 122 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYA-----REGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEA 122 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-----HCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 34789999999999999999999 7999998876642110 00 0 0
Q ss_pred -------Ccc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCc
Q 030483 56 -------ALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 56 -------~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
+.+ .+++.+.+++|+.++.++++++...+. .-.+|+++||...|...
T Consensus 123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~---~~g~iv~iSS~~~~~~~------ 193 (294)
T PRK07985 123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLP---KGASIITTSSIQAYQPS------ 193 (294)
T ss_pred HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh---cCCEEEEECCchhccCC------
Confidence 000 112355789999999999998876421 12579999887655310
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
| . . ..+...+.+.+.+.+ + ...|+++.+++|++|.++.
T Consensus 194 ---------~--~-~--~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~ 236 (294)
T PRK07985 194 ---------P--H-L--LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_pred ---------C--C-c--chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence 0 0 0 001111112222222 2 3468999999999999884
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.3e-09 Score=85.93 Aligned_cols=130 Identities=7% Similarity=-0.019 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------CC-CC----------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WF-PT---------------------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~---------------------- 55 (176)
+.++++|||||+|+||++++++|+ +.|++|++++|+.... .. ..
T Consensus 5 l~~~~ilItGasggiG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLA-----EEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVA 79 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHH-----HcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 557899999999999999999999 7999999999876431 00 00
Q ss_pred -----Ccc---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 56 -----ALV---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 56 -----~~v---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
+.+ .++..+.+++|+.++.++.+++...+. ....+|+++||...+.+
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~iv~~ss~~~~~~----------- 146 (258)
T PRK08628 80 KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLK--ASRGAIVNISSKTALTG----------- 146 (258)
T ss_pred hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhh--ccCcEEEEECCHHhccC-----------
Confidence 000 012345678899988888887765321 12357898887543310
Q ss_pred CCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
.+ ....+...+...+.+.+. ...++++..+||+.|+++.
T Consensus 147 ----~~-----~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~ 190 (258)
T PRK08628 147 ----QG-----GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL 190 (258)
T ss_pred ----CC-----CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence 00 000011111222333222 3568999999999999985
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.2e-10 Score=89.71 Aligned_cols=129 Identities=10% Similarity=-0.008 Sum_probs=82.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------CC-------C--------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------WF-------P-------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~~-------~-------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|+...|+.... .. +
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~-----~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 128 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFA-----REGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERA 128 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHH-----HcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHH
Confidence 35899999999999999999999 7899998776543210 00 0
Q ss_pred ------CCcc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCc
Q 030483 55 ------TALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 55 ------~~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
.+.+ .+++...+++|+.++.++++++...+. .-.+|+++||...|...
T Consensus 129 ~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~~~iv~~sS~~~~~~~------ 199 (300)
T PRK06128 129 VKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLP---PGASIINTGSIQSYQPS------ 199 (300)
T ss_pred HHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcC---cCCEEEEECCccccCCC------
Confidence 0000 112345789999999999999886521 12579999887665311
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ ....+...+...+.+.+ + ...|+++.+++|+.|.++..
T Consensus 200 ---------~-----~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~ 243 (300)
T PRK06128 200 ---------P-----TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQ 243 (300)
T ss_pred ---------C-----CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCc
Confidence 0 00001111122222222 2 34689999999999998853
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=3e-10 Score=90.96 Aligned_cols=129 Identities=14% Similarity=-0.028 Sum_probs=81.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CC--------C---------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WF--------P--------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~--------~--------------- 54 (176)
+++|++|||||+|+||++++++|+ +.|++|+.++|+.... .. +
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La-----~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 78 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFA-----RRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAF 78 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 557899999999999999999999 7999999888764210 00 0
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .++..+.+++|+.++.++++++...+.......+|+++||...+..
T Consensus 79 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~--------- 149 (275)
T PRK05876 79 RLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP--------- 149 (275)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC---------
Confidence 0000 1123456789999998888887543100111357999988655421
Q ss_pred CCCCCCccccCCCCCCCCCcchHH--------HHHHHHh-hCCCceEEEeccCceEeCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYE--------LEDVSAS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~--------~e~~~~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
.| ....|.. .+.+..+ ...|+++++++|+.+.++..
T Consensus 150 ------~~---------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 194 (275)
T PRK05876 150 ------NA---------GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLV 194 (275)
T ss_pred ------CC---------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccc
Confidence 00 1112222 1222233 45689999999999988743
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.5e-10 Score=88.14 Aligned_cols=35 Identities=23% Similarity=0.149 Sum_probs=32.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++|||||+|+||++++++|+ +.|++|+.++|++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~-----~~G~~v~~~~r~~ 36 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYA-----RQGATLGLVARRT 36 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 4789999999999999999999 6899999999864
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.1e-09 Score=87.23 Aligned_cols=37 Identities=22% Similarity=0.159 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|.++++|||||+|+||++++++|+ ++|++|++++|+.
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~-----~~G~~V~~~~r~~ 41 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLV-----AAGAAVMIVGRNP 41 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCeEEEEeCCH
Confidence 556899999999999999999999 7999999999864
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.9e-09 Score=82.61 Aligned_cols=132 Identities=12% Similarity=0.065 Sum_probs=81.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC----------------------CCCcc------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF----------------------PTALV------ 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~----------------------~~~~v------ 58 (176)
+++|++|||||+|+||++++++|+ ++|++|+.++|+...... ..+.+
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~ 77 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFL-----AQGAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGI 77 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHH-----HCCCEEEEEeCCcccccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence 356899999999999999999999 689999999987532110 00111
Q ss_pred -----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCC
Q 030483 59 -----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 127 (176)
Q Consensus 59 -----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~ 127 (176)
.++.++.+++|+.++.++++++...+. ..+..+|+++||...+.. .+ ..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~---------------~~---~~- 137 (235)
T PRK06550 78 LDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQML-ERKSGIIINMCSIASFVA---------------GG---GG- 137 (235)
T ss_pred CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEcChhhccC---------------CC---CC-
Confidence 112345688999999888888765310 112357888887644310 00 00
Q ss_pred CCCCCcchHHHHHHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 128 RLPFPNFYYELEDVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 128 ~~~~~~~y~~~e~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
..+...+...+.+. .+ ...++++++++|+++..+..
T Consensus 138 -~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~ 178 (235)
T PRK06550 138 -AAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMT 178 (235)
T ss_pred -cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccc
Confidence 00111122222222 22 35689999999999987754
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.3e-09 Score=83.98 Aligned_cols=90 Identities=11% Similarity=0.045 Sum_probs=62.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--------C------------------CCcc--
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------P------------------TALV-- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------~------------------~~~v-- 58 (176)
+.+|++|||||+|+||++++++|+ +.|++|+.++|+...... . .+.+
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLK-----EEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 456899999999999999999999 799999999987543110 0 0001
Q ss_pred --------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 59 --------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 59 --------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
.+++.+.+++|+.++.++++++...+. ..+..+|+++||...+
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~isS~~~~ 135 (258)
T PRK06398 79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYML-KQDKGVIINIASVQSF 135 (258)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCeEEEEeCcchhc
Confidence 112345689999998888887765321 0124689999886544
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.2e-10 Score=87.99 Aligned_cols=138 Identities=10% Similarity=-0.014 Sum_probs=84.3
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CCC----------------
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFP---------------- 54 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~---------------- 54 (176)
|+....+.++++|||||+|+||++++++|+ +.|++|+.++|+.... ...
T Consensus 1 ~~~~~~l~~k~~lItGas~giG~~ia~~L~-----~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~ 75 (254)
T PRK08085 1 MNDLFSLAGKNILITGSAQGIGFLLATGLA-----EYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEA 75 (254)
T ss_pred CcccccCCCCEEEEECCCChHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHH
Confidence 455444557899999999999999999999 6899999999874310 000
Q ss_pred -----------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeeccccc
Q 030483 55 -----------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 107 (176)
Q Consensus 55 -----------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~ 107 (176)
.+.+ .+++++.+++|+.++.++++++...+. ..+..+|+++||.....
T Consensus 76 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~---- 150 (254)
T PRK08085 76 AIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMV-KRQAGKIINICSMQSEL---- 150 (254)
T ss_pred HHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEEccchhcc----
Confidence 0000 112345788999998888887765411 11346789888753211
Q ss_pred CCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 108 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 108 d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+.. ....+...+...+.+.+. ...++++.+++|+++..+..
T Consensus 151 -------------~~~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~ 196 (254)
T PRK08085 151 -------------GRD---TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMT 196 (254)
T ss_pred -------------CCC---CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcch
Confidence 000 000111112222322222 35689999999999988743
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-09 Score=85.85 Aligned_cols=130 Identities=18% Similarity=0.104 Sum_probs=80.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C-CC--------------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W-FP-------------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~-------------------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|+.++|+..+. . ..
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 83 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLI-----AEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFG 83 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 46899999999999999999999 7899999988764210 0 00
Q ss_pred -CCcc------c------------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 55 -TALV------Q------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 55 -~~~v------~------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
.+.+ . +++.+.+++|+.++.++++++...+. . ...+|+++||...+..
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~g~ii~~sS~~~~~~----------- 150 (255)
T PRK05717 84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLR-A-HNGAIVNLASTRARQS----------- 150 (255)
T ss_pred CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-H-cCcEEEEEcchhhcCC-----------
Confidence 0001 0 11345789999999999999875321 1 1257888887544320
Q ss_pred CCCCccccCCCCCCCCCcchHHHHHHHHh----hCCCceEEEeccCceEeCCC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYELEDVSAS----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~e~~~~~----~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+ .. .++...+...+.+.+. ...++++.+++|+++.++..
T Consensus 151 ----~~---~~--~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~ 194 (255)
T PRK05717 151 ----EP---DT--EAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDP 194 (255)
T ss_pred ----CC---CC--cchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcc
Confidence 00 00 0111112222333322 23358999999999988653
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.9e-09 Score=84.35 Aligned_cols=127 Identities=14% Similarity=0.079 Sum_probs=78.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CCCC------------------------Cc-c
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WFPT------------------------AL-V 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~------------------------~~-v 58 (176)
+++|||||+|+||++++++|+ .+|++|++++|+.... .... +. +
T Consensus 2 ~~vlItGas~giG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i 76 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYA-----KQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWI 76 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-----hCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEE
Confidence 579999999999999999999 7999999999874210 0000 00 0
Q ss_pred --------c----Cc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcccc
Q 030483 59 --------Q----ES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 59 --------~----~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~ 123 (176)
. .+ .++.+++|+.++.++++++...+. +-++++++||..... ..|..
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~iv~isS~~~~~---------------~~~~~ 138 (240)
T PRK06101 77 FNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLS---CGHRVVIVGSIASEL---------------ALPRA 138 (240)
T ss_pred EcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCCeEEEEechhhcc---------------CCCCC
Confidence 0 01 235689999999999999886421 124677777642210 00100
Q ss_pred CCCCCCCCCcchHHHHHHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 124 EDSSRLPFPNFYYELEDVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 124 E~~~~~~~~~~y~~~e~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. ++.......+.+. .+ ...+++++++||++++++..
T Consensus 139 ~-----~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~ 179 (240)
T PRK06101 139 E-----AYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLT 179 (240)
T ss_pred c-----hhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCc
Confidence 0 0111111222222 12 45689999999999998753
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-09 Score=83.94 Aligned_cols=35 Identities=23% Similarity=0.294 Sum_probs=31.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|++|||||+|+||++++++|+ ++ ++|++++|+.
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~-----~~-~~V~~~~r~~ 36 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELA-----PT-HTLLLGGRPA 36 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHH-----hh-CCEEEEeCCH
Confidence 45789999999999999999999 56 9999999975
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.02 E-value=9.8e-10 Score=86.43 Aligned_cols=36 Identities=25% Similarity=0.239 Sum_probs=32.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 1 ~~k~~lItGas~giG~~la~~l~-----~~G~~v~~~~r~~ 36 (256)
T PRK08643 1 MSKVALVTGAGQGIGFAIAKRLV-----EDGFKVAIVDYNE 36 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 46789999999999999999999 7899999999864
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=9.9e-10 Score=85.84 Aligned_cols=128 Identities=12% Similarity=0.053 Sum_probs=78.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-----------CC---------C--------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FP---------T-------------- 55 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~---------~-------------- 55 (176)
|+++||||+|+||.+++++|+ +.|++|++++|+..+.. .. +
T Consensus 2 ~~vlItGas~giG~~~a~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (243)
T PRK07102 2 KKILIIGATSDIARACARRYA-----AAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPAL 76 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-----hcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhc
Confidence 589999999999999999999 68999999998753210 00 0
Q ss_pred -Ccc-------------cCc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 56 -ALV-------------QES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 56 -~~v-------------~~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
+.+ ..+ ..+.+++|+.++.++++++...+. ..+..+++++||.....
T Consensus 77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~--------------- 140 (243)
T PRK07102 77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFE-ARGSGTIVGISSVAGDR--------------- 140 (243)
T ss_pred CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH-hCCCCEEEEEecccccC---------------
Confidence 001 111 234678999999888888765321 11346788888742210
Q ss_pred CccccCCCCCCCCCcchHHHHH----HHHh-hCCCceEEEeccCceEeCC
Q 030483 119 EVPFKEDSSRLPFPNFYYELED----VSAS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~~e~----~~~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
..+ .. ..+.......+. +..+ ...++++.+++|+.+.++.
T Consensus 141 ~~~--~~---~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~ 185 (243)
T PRK07102 141 GRA--SN---YVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPM 185 (243)
T ss_pred CCC--CC---cccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChh
Confidence 000 00 001111111111 2122 4568999999999998874
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.8e-09 Score=82.06 Aligned_cols=37 Identities=24% Similarity=0.179 Sum_probs=32.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++|||||+|+||+++++.|+ +.|++|+.+.|+..
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~-----~~G~~v~~~~~~~~ 40 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLA-----AQGANVVINYASSE 40 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCch
Confidence 45799999999999999999999 68999988887654
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=6.3e-10 Score=87.07 Aligned_cols=131 Identities=12% Similarity=0.009 Sum_probs=78.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE-ecCCCCC---------CC--------C--------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPG---------WF--------P-------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~---------~~--------~-------------- 54 (176)
|.++++|||||+|+||++++++|+ +.|++|+.+ .|+.... .. +
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~-----~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLA-----EEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQI 76 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 345799999999999999999999 789998764 5543210 00 0
Q ss_pred ------CCcc------------cC----cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 55 ------TALV------------QE----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 55 ------~~~v------------~~----~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
.+.+ .+ .....+++|..++.++++++...+. ..+.++|+++||...+.
T Consensus 77 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~g~iv~~sS~~~~~--------- 146 (250)
T PRK08063 77 DEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLME-KVGGGKIISLSSLGSIR--------- 146 (250)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCeEEEEEcchhhcc---------
Confidence 0001 00 1133577999998888888876421 11346899998854321
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
+.. +...+...+...+.+.+. ...++++.+++|+.+..+.
T Consensus 147 --------~~~---~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~ 191 (250)
T PRK08063 147 --------YLE---NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDA 191 (250)
T ss_pred --------CCC---CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence 000 000011112222333322 2468999999999997654
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=4.1e-09 Score=81.83 Aligned_cols=131 Identities=8% Similarity=-0.014 Sum_probs=78.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-----------CC--CC----------------CC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-----------GW--FP----------------TA 56 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-----------~~--~~----------------~~ 56 (176)
+++++++|||||+|+||++++++|+ ++|++|+.+.|+... .. .+ .+
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id 77 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFV-----TDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALD 77 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCc
Confidence 3557899999999999999999999 789999887654211 00 00 00
Q ss_pred cc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCc
Q 030483 57 LV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 120 (176)
Q Consensus 57 ~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~ 120 (176)
.+ .+++++.+++|+.++.+++..+...+ . .-.+++++||.... ..
T Consensus 78 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~-~~g~iv~isS~~~~----------------~~ 138 (237)
T PRK12742 78 ILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQM--P-EGGRIIIIGSVNGD----------------RM 138 (237)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHH--h-cCCeEEEEeccccc----------------cC
Confidence 01 11235678999999888876666542 1 23578888874321 01
Q ss_pred cccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 121 PFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 121 p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
|..... .+...+...+.+.+. ...++++.+++|+.+..+.
T Consensus 139 ~~~~~~---~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~ 183 (237)
T PRK12742 139 PVAGMA---AYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDA 183 (237)
T ss_pred CCCCCc---chHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCc
Confidence 110000 111222233333322 3568999999999987653
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.9e-09 Score=87.02 Aligned_cols=129 Identities=11% Similarity=-0.021 Sum_probs=82.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------CCC------C---------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------WFP------T--------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~------~--------------- 55 (176)
++|++|||||+|+||++++++|+ +.|++|+.++|+.... ... +
T Consensus 45 ~~k~iLItGasggIG~~la~~l~-----~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~ 119 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFA-----KEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETV 119 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 35789999999999999999999 6899999988864210 000 0
Q ss_pred ------Ccc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 56 ------ALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 56 ------~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
+.+ .+.+.+.+++|+.++.++++++...+. .-.+++++||...|...
T Consensus 120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~---~~g~iV~isS~~~~~~~------- 189 (290)
T PRK06701 120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLK---QGSAIINTGSITGYEGN------- 189 (290)
T ss_pred HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh---hCCeEEEEecccccCCC-------
Confidence 000 011245688999999999999876421 12579999887665311
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+. .. .+.......+.+.+. ...++++.++||+.++.+..
T Consensus 190 --------~~---~~--~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~ 233 (290)
T PRK06701 190 --------ET---LI--DYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLI 233 (290)
T ss_pred --------CC---cc--hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccc
Confidence 10 00 011111222222222 24589999999999988743
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.3e-09 Score=84.60 Aligned_cols=37 Identities=38% Similarity=0.354 Sum_probs=33.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++++|||||+|+||++++++|+ +.|++|++++|++
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~-----~~g~~V~~~~r~~ 40 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALL-----AEGYKVAITARDQ 40 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHH-----HCCCEEEEeeCCH
Confidence 446899999999999999999999 6899999999875
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.1e-09 Score=82.72 Aligned_cols=36 Identities=33% Similarity=0.481 Sum_probs=32.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++|||||+|+||+++++.|+ +.|++|++++|+..
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~-----~~g~~v~~~~r~~~ 37 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELK-----RRGYRVLAACRKPD 37 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 4689999999999999999999 68999999998753
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.4e-09 Score=86.42 Aligned_cols=37 Identities=24% Similarity=0.060 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|.||++++++|+ +.|++|++++|++
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~-----~~G~~v~~~~r~~ 39 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALA-----ALGARVAIGDLDE 39 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 446799999999999999999999 6899999998864
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.4e-09 Score=85.02 Aligned_cols=35 Identities=20% Similarity=0.115 Sum_probs=30.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
|++++|||||+|+||++++++|+ +.|+.|+...++
T Consensus 1 ~~~~~lVtG~~~~iG~~~a~~l~-----~~G~~vv~~~~~ 35 (248)
T PRK06123 1 MRKVMIITGASRGIGAATALLAA-----ERGYAVCLNYLR 35 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEecCC
Confidence 35789999999999999999999 689988776543
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=2e-09 Score=87.24 Aligned_cols=36 Identities=28% Similarity=0.203 Sum_probs=32.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~-----~~G~~vi~~~r~~ 50 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALA-----AKGAHVVLAVRNL 50 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 46899999999999999999999 6899999999863
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.7e-09 Score=86.56 Aligned_cols=37 Identities=24% Similarity=0.139 Sum_probs=33.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++|+++|+ ++|++|+.++|+.
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~-----~~G~~V~~~~r~~ 40 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGA-----ALGMKLVLADVQQ 40 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHH-----HCCCEEEEEeCCh
Confidence 345799999999999999999999 7899999998863
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=8.7e-10 Score=86.12 Aligned_cols=37 Identities=19% Similarity=0.220 Sum_probs=33.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++|||||+|+||++|+++|+ +.|++|++++|++.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~-----~~G~~V~~~~r~~~ 40 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFA-----AEGARVVVTDRNEE 40 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 45799999999999999999999 78999999999853
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=3e-09 Score=83.51 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=31.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+++||||+|+||.+++++|+ +.|++|++++|++
T Consensus 1 ~~vlItGasg~iG~~la~~l~-----~~G~~V~~~~r~~ 34 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFI-----QQGHKVIATGRRQ 34 (248)
T ss_pred CEEEEECCCchHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 479999999999999999999 7899999999875
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=9.3e-09 Score=80.14 Aligned_cols=38 Identities=21% Similarity=0.161 Sum_probs=34.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++.++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~-----~~g~~V~~~~r~~ 40 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYA-----AAGATVILVARHQ 40 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHH-----HcCCEEEEEeCCh
Confidence 3556899999999999999999999 6899999999865
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.1e-09 Score=83.50 Aligned_cols=38 Identities=21% Similarity=0.059 Sum_probs=33.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+.++++|||||+|+||+++++.|+ +.|++|++++|++.
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~-----~~G~~V~~~~r~~~ 40 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFAL-----KEGAQVCINSRNEN 40 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 345799999999999999999999 79999999999653
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=5.2e-09 Score=82.29 Aligned_cols=90 Identities=16% Similarity=0.048 Sum_probs=62.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-----C--C-C---CC------------------Cc
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-----G--W-F---PT------------------AL 57 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-----~--~-~---~~------------------~~ 57 (176)
+++|++|||||+|+||++++++|+ ..|++|+.++|+... . . . .+ +.
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFL-----AAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 456899999999999999999999 689999999987521 0 0 0 00 00
Q ss_pred c----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 58 V----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 58 v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
+ .+.+++.+++|+.++.++++++...+.......+|+++||...
T Consensus 79 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~ 138 (252)
T PRK07856 79 LVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSG 138 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccc
Confidence 1 1123457889999999999887653210112357899887644
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.4e-09 Score=85.77 Aligned_cols=89 Identities=17% Similarity=0.089 Sum_probs=61.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C-CC---------C-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W-FP---------T------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~~---------~------------- 55 (176)
+++++|||||+|+||++++++|+ +.|++|+.++|+.... . .. +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~ 85 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALG-----EAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLE 85 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 6899999998864210 0 00 0
Q ss_pred -----Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhc-CCCCCCccEEEEeccceee
Q 030483 56 -----ALV----------------QESEEVNIFKNSTMLKNVLSVLVSS-NSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 56 -----~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~-~~~~~~v~~vv~~Ss~~~y 102 (176)
+.+ .+.+.+.+++|+.++.++++++... +. ..+..+|+++||...+
T Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~-~~~~~~~v~~sS~~~~ 153 (259)
T PRK08213 86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMI-PRGYGRIINVASVAGL 153 (259)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHH-hcCCeEEEEECChhhc
Confidence 000 1122456789999999999987643 11 1235689999886554
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.8e-09 Score=82.60 Aligned_cols=132 Identities=11% Similarity=0.078 Sum_probs=81.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CC-C------------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WF-P------------------------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~------------------------ 54 (176)
+.+|++|||||+|+||.+++++|+ +.|++|+.++|+.... .. .
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~-----~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLA-----EAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE 77 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 456899999999999999999999 7999999999864210 00 0
Q ss_pred ---CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 55 ---TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 55 ---~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
.+.+ .+.+++.+++|+.++.++++++...+.......+++++||...|...
T Consensus 78 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------- 147 (248)
T TIGR01832 78 FGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG---------- 147 (248)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC----------
Confidence 0000 01234567899999888888876431001113578999887655310
Q ss_pred CCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ ..+ .+.......+.+.+ + ...++++.+++|+.|..+.
T Consensus 148 -----~---~~~--~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 190 (248)
T TIGR01832 148 -----I---RVP--SYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNN 190 (248)
T ss_pred -----C---CCc--hhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcc
Confidence 1 000 11111222222222 2 3468999999999997764
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=9e-09 Score=81.47 Aligned_cols=95 Identities=9% Similarity=0.012 Sum_probs=64.0
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--------C------------------
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------P------------------ 54 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------~------------------ 54 (176)
|.....+.++++|||||+|+||++++++|+ ++|++|+.++|+...... +
T Consensus 1 ~~~~~~l~~k~vlItG~s~gIG~~la~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (266)
T PRK06171 1 MQDWLNLQGKIIIVTGGSSGIGLAIVKELL-----ANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKF 75 (266)
T ss_pred CcccccCCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 333334567899999999999999999999 799999999887543110 0
Q ss_pred --CCcc------c-------------------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 55 --TALV------Q-------------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 55 --~~~v------~-------------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
.+.+ . ++++..+++|+.++.++++++...+. ..+-.+|+++||...
T Consensus 76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~isS~~~ 148 (266)
T PRK06171 76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMV-KQHDGVIVNMSSEAG 148 (266)
T ss_pred CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHH-hcCCcEEEEEccccc
Confidence 0000 0 01234678999999888888876421 112357888887644
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.7e-09 Score=84.96 Aligned_cols=40 Identities=30% Similarity=0.243 Sum_probs=35.0
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 4 ~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
...+.++++|||||+|+||++++++|+ ..|++|++++|+.
T Consensus 4 ~~~~~~k~ilItGasg~IG~~~a~~l~-----~~G~~Vi~~~r~~ 43 (258)
T PRK06949 4 SINLEGKVALVTGASSGLGARFAQVLA-----QAGAKVVLASRRV 43 (258)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 334567899999999999999999999 6899999999864
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=5e-09 Score=81.95 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=32.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++++|||||+|+||++++++|+ +.|++|+.++|++
T Consensus 1 ~~k~vlItGas~giG~~la~~l~-----~~g~~v~~~~r~~ 36 (248)
T PRK08251 1 TRQKILITGASSGLGAGMAREFA-----AKGRDLALCARRT 36 (248)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 35789999999999999999999 6899999999875
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.8e-09 Score=84.44 Aligned_cols=87 Identities=10% Similarity=0.001 Sum_probs=59.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-CC----------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-FP---------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~---------------------- 54 (176)
.++++|||||+||||++++++|+ ++|++|+.+.|+.... . ..
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLA-----KEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATI 79 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHH
Confidence 35799999999999999999999 7999988776542110 0 00
Q ss_pred -----CCcc-------------cCc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 55 -----TALV-------------QES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 55 -----~~~v-------------~~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
.+.+ ..+ .++.+++|+.++.++++++.+.. ....+|+++||...|
T Consensus 80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~---~~~~~iv~~sS~~~~ 145 (252)
T PRK06077 80 DRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEM---REGGAIVNIASVAGI 145 (252)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHh---hcCcEEEEEcchhcc
Confidence 0000 011 23567899999888888887652 122578998886654
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.9e-09 Score=85.05 Aligned_cols=131 Identities=8% Similarity=-0.017 Sum_probs=78.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CC-C---------C------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WF-P---------T------------ 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~-~---------~------------ 55 (176)
|++++|||||+|+||++++++|+ +.|++|+.+.|+.... .. . +
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLA-----QQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLI 75 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 45789999999999999999999 7999998886643210 00 0 0
Q ss_pred ------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 56 ------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 56 ------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
+.+ .+++.+.+++|+.+..++++++...+....+-.+|+++||....
T Consensus 76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~----------- 144 (256)
T PRK12743 76 QRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH----------- 144 (256)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------
Confidence 000 11234568899999999988877642001012478888874211
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
.+.... ..+...+...+.+.+. ...++++..++|+.+..+.
T Consensus 145 ------~~~~~~---~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~ 190 (256)
T PRK12743 145 ------TPLPGA---SAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPM 190 (256)
T ss_pred ------CCCCCc---chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcc
Confidence 111000 0011112222333222 3568999999999999874
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=2e-09 Score=84.78 Aligned_cols=36 Identities=25% Similarity=0.245 Sum_probs=32.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 1 m~k~ilItG~~~~IG~~la~~l~-----~~g~~vi~~~r~~ 36 (259)
T PRK12384 1 MNQVAVVIGGGQTLGAFLCHGLA-----EEGYRVAVADINS 36 (259)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 46789999999999999999999 6899999999864
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.1e-09 Score=85.44 Aligned_cols=35 Identities=29% Similarity=0.307 Sum_probs=32.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+|++|||||+|+||++|+++|+ ++|++|++++|++
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~-----~~G~~V~~~~r~~ 40 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFA-----KAGWDLALVARSQ 40 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 4789999999999999999999 7999999999974
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=8.6e-09 Score=80.19 Aligned_cols=35 Identities=23% Similarity=0.293 Sum_probs=32.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++|||||+|+||++++++|. ++|+.|++++|+.
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~-----~~g~~vi~~~r~~ 36 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELL-----NDGYRVIATYFSG 36 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCc
Confidence 4689999999999999999999 6899999999873
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.9e-09 Score=83.97 Aligned_cols=31 Identities=23% Similarity=0.153 Sum_probs=27.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
+++|||||+|+||++++++|+ +.|++|+++.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~-----~~g~~v~~~~ 32 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLA-----QEGYTVAVNY 32 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEe
Confidence 579999999999999999999 6899987743
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=6.5e-09 Score=82.77 Aligned_cols=34 Identities=35% Similarity=0.586 Sum_probs=31.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++|||||+|+||++++++|+ ..|++|++++|+.
T Consensus 2 k~vlItGasggiG~~la~~l~-----~~G~~V~~~~r~~ 35 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFK-----AAGYEVWATARKA 35 (274)
T ss_pred CEEEEecCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 689999999999999999999 6899999999874
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=8.5e-09 Score=81.20 Aligned_cols=37 Identities=22% Similarity=0.083 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~-----~~G~~v~~~~r~~ 42 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLA-----QAGADVALFDLRT 42 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCc
Confidence 456899999999999999999999 7999999999864
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=9.7e-09 Score=80.81 Aligned_cols=37 Identities=24% Similarity=0.268 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|++++|||||+|+||++++++|+ +.|++|++++|++.
T Consensus 1 ~~k~ilItGat~~iG~~la~~L~-----~~g~~v~~~~r~~~ 37 (257)
T PRK07074 1 TKRTALVTGAAGGIGQALARRFL-----AAGDRVLALDIDAA 37 (257)
T ss_pred CCCEEEEECCcchHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 35789999999999999999999 68999999998743
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=6.4e-09 Score=81.69 Aligned_cols=128 Identities=10% Similarity=-0.015 Sum_probs=78.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC-CC---------------------CCC------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP-PP---------------------GWF------------ 53 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~-~~---------------------~~~------------ 53 (176)
++|++|||||+|+||++++++|+ +.|++|+.+.++. .. ...
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLA-----NDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLD 77 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHH
Confidence 35899999999999999999999 7999998765321 10 000
Q ss_pred ----------CCCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeeccccc
Q 030483 54 ----------PTALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 107 (176)
Q Consensus 54 ----------~~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~ 107 (176)
..+.+ .+.++..+++|+.++..+++++...+. +-.+|+++||...+.
T Consensus 78 ~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~---~~g~iv~isS~~~~~---- 150 (252)
T PRK12747 78 NELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR---DNSRIINISSAATRI---- 150 (252)
T ss_pred HHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhh---cCCeEEEECCccccc----
Confidence 00001 112355678999999999988776521 125899998865432
Q ss_pred CCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 108 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 108 d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+..+.. .+...+.+.+.+.+ + ...++++..+.|+.|.++.
T Consensus 151 -------------~~~~~~---~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~ 195 (252)
T PRK12747 151 -------------SLPDFI---AYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM 195 (252)
T ss_pred -------------CCCCch---hHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence 110100 01111122222222 2 3568999999999998874
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.5e-09 Score=83.35 Aligned_cols=134 Identities=13% Similarity=0.006 Sum_probs=82.3
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecCCCCCC---------C-C-------------------
Q 030483 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPGW---------F-P------------------- 54 (176)
Q Consensus 5 ~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~~~---------~-~------------------- 54 (176)
+.+++++++||||+|+||++++++|. +.|++ |++++|+..... . .
T Consensus 2 ~~~~~k~vlItGa~g~iG~~la~~l~-----~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (260)
T PRK06198 2 GRLDGKVALVTGGTQGLGAAIARAFA-----ERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVA 76 (260)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHH-----HCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 34567899999999999999999999 68999 999988643100 0 0
Q ss_pred --------CCcc-------------cCc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCC
Q 030483 55 --------TALV-------------QES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 110 (176)
Q Consensus 55 --------~~~v-------------~~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~ 110 (176)
.+.+ ..+ ....+++|+.++.++++++...+.......+++++||...|++.
T Consensus 77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----- 151 (260)
T PRK06198 77 AADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ----- 151 (260)
T ss_pred HHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC-----
Confidence 0000 001 23467899999988888876541101112578888887665411
Q ss_pred ccCCCCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 111 LAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 111 ~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ . ...+.......+.+.+ + ...+++++.++|++++++.
T Consensus 152 ----------~--~---~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~ 194 (260)
T PRK06198 152 ----------P--F---LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEG 194 (260)
T ss_pred ----------C--C---cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcc
Confidence 0 0 0001111122222222 1 3457999999999999875
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.3e-09 Score=82.26 Aligned_cols=88 Identities=16% Similarity=0.051 Sum_probs=59.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-CC---------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-FP--------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~--------------------- 54 (176)
+.++++|||||+|+||++++++|+ ..|++|+++.++.... . ..
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALA-----QEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEA 78 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 346899999999999999999999 6899998765532110 0 00
Q ss_pred ------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 55 ------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 55 ------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
.+.+ .+...+.+++|+.++.++++++...+. ..+..+++++||..
T Consensus 79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~ 145 (247)
T PRK12935 79 VNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYIT-EAEEGRIISISSII 145 (247)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEEcchh
Confidence 0001 123345689999999999888875311 01235789988753
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.9e-09 Score=83.14 Aligned_cols=133 Identities=12% Similarity=0.002 Sum_probs=82.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C-CC--------C------------
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W-FP--------T------------ 55 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~~--------~------------ 55 (176)
++..|++|||||+|.||++++++|. +.|++|+.++|+.... . .. +
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 80 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFL-----GLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILD 80 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence 3456899999999999999999999 7999999998864210 0 00 0
Q ss_pred ---------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCC
Q 030483 56 ---------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 110 (176)
Q Consensus 56 ---------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~ 110 (176)
+.+ .+++++.+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 81 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~ii~~sS~~~~~~------ 153 (257)
T PRK09242 81 WVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLK-QHASSAIVNIGSVSGLTH------ 153 (257)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-hcCCceEEEECccccCCC------
Confidence 000 112345688999998888888754311 113468999988654321
Q ss_pred ccCCCCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 111 LAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 111 ~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
..... .+.......+.+.+ + ...++++..++|+.+..+..
T Consensus 154 -----------~~~~~---~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~ 198 (257)
T PRK09242 154 -----------VRSGA---PYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLT 198 (257)
T ss_pred -----------CCCCc---chHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccc
Confidence 00000 01111122222222 2 35689999999999988754
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=7.5e-09 Score=81.64 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=32.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|++|||||+|+||++++++|+ +.|++|++++|+..
T Consensus 2 k~vlItGasg~iG~~la~~l~-----~~G~~V~~~~r~~~ 36 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFA-----AEGWRVGAYDINEA 36 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCHH
Confidence 689999999999999999999 78999999998654
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.3e-08 Score=80.27 Aligned_cols=35 Identities=23% Similarity=0.108 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+++++|||||+|+||.+++++|+ +.|++|+.+.++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~-----~~G~~vv~i~~~ 41 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLA-----AQGAKAVAIHYN 41 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHH-----HCCCcEEEEecC
Confidence 46899999999999999999999 789997777654
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.5e-09 Score=83.43 Aligned_cols=38 Identities=26% Similarity=0.166 Sum_probs=34.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+.++++|||||+|+||.+++++|+ +.|++|++++|+..
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~-----~~G~~v~~~~r~~~ 42 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLA-----AEGATVVVGDIDPE 42 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 457899999999999999999999 68999999988743
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=9.1e-09 Score=81.02 Aligned_cols=37 Identities=32% Similarity=0.144 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||++++++|. +.|++|+.+.|+.
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~-----~~G~~v~~~~~~~ 41 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFL-----REGAKVAVLYNSA 41 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCc
Confidence 356899999999999999999999 7999998876653
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.2e-09 Score=83.63 Aligned_cols=43 Identities=21% Similarity=0.148 Sum_probs=36.2
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+-+-..+++++|||||+|+||++++++|+ ..|+.|++++|++
T Consensus 1 ~~~~~~~~~k~ilItGasggIG~~la~~l~-----~~G~~V~~~~r~~ 43 (264)
T PRK07576 1 MTTMFDFAGKNVVVVGGTSGINLGIAQAFA-----RAGANVAVASRSQ 43 (264)
T ss_pred CCccccCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 444434456899999999999999999999 7999999999864
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.7e-08 Score=79.31 Aligned_cols=37 Identities=30% Similarity=0.329 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..++++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~-----~~G~~v~~~~r~~ 45 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALA-----GAGAHVLVNGRNA 45 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HcCCeEEEEeCCH
Confidence 346899999999999999999999 7899999999874
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.4e-09 Score=82.54 Aligned_cols=34 Identities=29% Similarity=0.256 Sum_probs=31.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 2 ~~vlVtGasg~iG~~la~~l~-----~~g~~Vi~~~r~~ 35 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLA-----RAGAQLVLAARNE 35 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 589999999999999999999 7899999999874
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.89 E-value=2e-08 Score=85.49 Aligned_cols=86 Identities=21% Similarity=0.236 Sum_probs=59.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------CCCCC--------------c--------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTA--------------L-------- 57 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~--------------~-------- 57 (176)
.+|+|||||||||+|.-|++.|++..|. - -.++.+.|..... +...+ .
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~-v-~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPD-V-KRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcC-c-ceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence 4689999999999999999999952111 1 2578787765431 10000 0
Q ss_pred ---------------------c---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 58 ---------------------V---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 58 ---------------------v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
| .+.......+|+.||+++++.|++. .+++.++++|+.
T Consensus 89 ~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~----~~l~~~vhVSTA 156 (467)
T KOG1221|consen 89 SEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEM----VKLKALVHVSTA 156 (467)
T ss_pred cCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHh----hhhheEEEeehh
Confidence 0 1122345678999999999999997 478889999874
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.5e-09 Score=82.40 Aligned_cols=37 Identities=30% Similarity=0.221 Sum_probs=32.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE-ecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~ 48 (176)
.+++++|||||+|+||++|+++|+ +.|++|+.+ +|++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~-----~~g~~v~~~~~r~~ 40 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLA-----KEGAKVVIAYDINE 40 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEcCCCH
Confidence 456899999999999999999999 689999988 7764
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=1e-08 Score=80.89 Aligned_cols=37 Identities=24% Similarity=0.137 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~-----~~G~~vv~~~r~~ 41 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFA-----REGAAVALADLDA 41 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 456899999999999999999999 7999999999864
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.4e-08 Score=79.91 Aligned_cols=36 Identities=17% Similarity=0.190 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++++++|||||+| .||.+++++|+ +.|++|++++|+
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~-----~~G~~vi~~~r~ 40 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLA-----AKGIDIFFTYWS 40 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHH-----HcCCcEEEEcCC
Confidence 4568899999996 69999999999 789999999887
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=9.5e-09 Score=83.09 Aligned_cols=36 Identities=25% Similarity=0.222 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++|||||+|+||.+++++|+ ..|++|++++|+.
T Consensus 39 ~~k~vlItGasggIG~~la~~La-----~~G~~Vi~~~R~~ 74 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFA-----RRGATVVAVARRE 74 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 35889999999999999999999 6899999999974
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.6e-09 Score=90.81 Aligned_cols=92 Identities=12% Similarity=0.004 Sum_probs=62.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CCC----------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFP---------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~---------------------- 54 (176)
+..+++|||||+|+||++++++|. ++|++|+.++|+.... ...
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 387 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFA-----REGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVR 387 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 446789999999999999999999 7999999999874210 000
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeec
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 103 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg 103 (176)
.+.+ .++....+++|+.++.++.+++...+.....-.+|+++||.+.|.
T Consensus 388 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 457 (582)
T PRK05855 388 AEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA 457 (582)
T ss_pred HhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence 0000 112345678999998888877654311011125899999977664
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.1e-08 Score=79.18 Aligned_cols=37 Identities=19% Similarity=0.093 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~-----~~G~~Vv~~~r~~ 40 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFA-----RHGANLILLDISP 40 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEecCCH
Confidence 346899999999999999999999 7899999999874
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.2e-09 Score=81.70 Aligned_cols=37 Identities=24% Similarity=0.132 Sum_probs=33.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++|||||+|+||++|+++|+ ++|++|++++|++.
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~-----~~G~~v~~~~r~~~ 42 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALA-----EAGATVAFNDGLAA 42 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 35899999999999999999999 79999999988643
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.87 E-value=9.4e-09 Score=81.89 Aligned_cols=39 Identities=28% Similarity=0.294 Sum_probs=35.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+++++++||||||+-||..++++|. ++|++|+.++|+..
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA-----~~g~~liLvaR~~~ 41 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLA-----RRGYNLILVARRED 41 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCcHH
Confidence 4667899999999999999999999 79999999999865
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.2e-08 Score=80.45 Aligned_cols=37 Identities=22% Similarity=0.181 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||++.||++++++|+ +.|++|++++|+.
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~-----~~G~~vv~~~~~~ 42 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLA-----KAGADIVGVGVAE 42 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEecCch
Confidence 457899999999999999999999 7999999888754
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.2e-08 Score=80.85 Aligned_cols=88 Identities=13% Similarity=0.014 Sum_probs=60.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CC-C-------------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WF-P------------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~------------------------- 54 (176)
+.++++|||||+|.||++++++|+ +.|++|+.++|+.... .. .
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALV-----AAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARF 78 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence 456899999999999999999999 7999999999875320 00 0
Q ss_pred --CCcc---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 55 --TALV---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 55 --~~~v---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
.+.+ .+++.+.+++|+.++.++++++...+. .+-.+|+++||...
T Consensus 79 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~g~ii~isS~~~ 140 (261)
T PRK08265 79 GRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA--RGGGAIVNFTSISA 140 (261)
T ss_pred CCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh--cCCcEEEEECchhh
Confidence 0000 112345678999998888887765421 12257888887543
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.9e-09 Score=81.71 Aligned_cols=33 Identities=33% Similarity=0.497 Sum_probs=30.9
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|+||||.+|+++++.|+ ..+++|+++.|+..
T Consensus 1 I~V~GatG~~G~~v~~~L~-----~~~~~V~~l~R~~~ 33 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALL-----SAGFSVRALVRDPS 33 (233)
T ss_dssp EEEETTTSHHHHHHHHHHH-----HTTGCEEEEESSSH
T ss_pred CEEECCccHHHHHHHHHHH-----hCCCCcEEEEeccc
Confidence 7999999999999999999 69999999999863
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.85 E-value=7e-08 Score=72.50 Aligned_cols=126 Identities=13% Similarity=0.151 Sum_probs=78.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--C--------------------CCcc-------cC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--P--------------------TALV-------QE 60 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--~--------------------~~~v-------~~ 60 (176)
|||-|+||||-+|++|+++++ .+||+|++++|++..... . .+.| +.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~-----~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~ 75 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEAL-----KRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGAS 75 (211)
T ss_pred CeEEEEecCchhHHHHHHHHH-----hCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCCCC
Confidence 589999999999999999999 799999999998764311 0 0111 22
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc-eeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHH-
Q 030483 61 SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT-KHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL- 138 (176)
Q Consensus 61 ~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~-~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~- 138 (176)
+..+... .....+++.++.+ ++.|++.+.|. +.|..+ | ..-.|.| +.|..|+..
T Consensus 76 ~~~~~~~---k~~~~li~~l~~a-----gv~RllVVGGAGSL~id~-------g-------~rLvD~p--~fP~ey~~~A 131 (211)
T COG2910 76 DNDELHS---KSIEALIEALKGA-----GVPRLLVVGGAGSLEIDE-------G-------TRLVDTP--DFPAEYKPEA 131 (211)
T ss_pred ChhHHHH---HHHHHHHHHHhhc-----CCeeEEEEcCccceEEcC-------C-------ceeecCC--CCchhHHHHH
Confidence 3333322 2245688888776 57788777553 222110 1 1112233 245556542
Q ss_pred ---HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 139 ---EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 139 ---e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
-+.|.. .+.+++||.+=|+..|=|+.
T Consensus 132 ~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PGe 162 (211)
T COG2910 132 LAQAEFLDSLRAEKSLDWTFVSPAAFFEPGE 162 (211)
T ss_pred HHHHHHHHHHhhccCcceEEeCcHHhcCCcc
Confidence 222222 35569999999999999876
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.6e-09 Score=81.57 Aligned_cols=87 Identities=14% Similarity=0.009 Sum_probs=60.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------C-C-C-------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------W-F-P------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~-~-~------------------- 54 (176)
.++++|||||+|+||++++++|+ ++|++|++++|+.... . . .
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFA-----AKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 35899999999999999999999 7999999999874310 0 0 0
Q ss_pred -CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 55 -TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 55 -~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
.+.+ .++..+.+++|+.++.++++++...+. ..+..+|+++||..
T Consensus 89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~ 150 (255)
T PRK06841 89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMI-AAGGGKIVNLASQA 150 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHH-hcCCceEEEEcchh
Confidence 0001 012244688999999999888765311 11246899988754
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.9e-08 Score=79.42 Aligned_cols=36 Identities=28% Similarity=0.390 Sum_probs=32.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
++|||||||||+|++++++|+ .+|++|++++|++..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~-----~~~~~v~~~~r~~~~ 36 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELL-----ARGHEVRAAVRNPEA 36 (275)
T ss_pred CeEEEEecccchHHHHHHHHH-----hCCCEEEEEEeCHHH
Confidence 479999999999999999999 689999999998653
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.8e-08 Score=76.36 Aligned_cols=36 Identities=28% Similarity=0.286 Sum_probs=31.9
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCC-CcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~ 49 (176)
.+++|||||+|+||.+++++|+ .. |++|++++|+..
T Consensus 8 ~~~vlItGas~giG~~la~~l~-----~~gg~~V~~~~r~~~ 44 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYL-----KNAPARVVLAALPDD 44 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-----hcCCCeEEEEeCCcc
Confidence 5789999999999999999999 45 599999999754
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=7.8e-09 Score=81.11 Aligned_cols=37 Identities=22% Similarity=0.218 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++++|||||+|+||.+++++|+ ..|++|++++|+.
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~-----~~G~~Vi~~~r~~ 42 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLA-----QQGAHVIVSSRKL 42 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 456899999999999999999999 6899999999874
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.3e-08 Score=78.88 Aligned_cols=36 Identities=22% Similarity=0.092 Sum_probs=32.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~-----~~G~~v~~~~~~~ 52 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFH-----KHGAKVCIVDLQD 52 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 46889999999999999999999 7999999998753
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=9e-09 Score=81.78 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=31.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++|||||+|+||++++++|+ ..|++|++++|+.
T Consensus 1 ~~vlVtGasggIG~~la~~l~-----~~g~~V~~~~r~~ 34 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWA-----REGWRLALADVNE 34 (270)
T ss_pred CEEEEecCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 479999999999999999999 6899999998864
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.4e-08 Score=76.91 Aligned_cols=35 Identities=20% Similarity=0.238 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+++++|||||+|+||++++++|+ +.|++|+.+.|+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~-----~~g~~v~~~~~~ 38 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLA-----ADGFAVAVNYAG 38 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEecCC
Confidence 45799999999999999999999 799998877765
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.3e-08 Score=80.92 Aligned_cols=42 Identities=21% Similarity=0.144 Sum_probs=36.8
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|-+++ +.+|++|||||+|.||++++++|+ +.|++|++++|+.
T Consensus 1 ~~~~~-l~~k~~lItGas~gIG~aia~~l~-----~~G~~V~~~~r~~ 42 (263)
T PRK08339 1 MLKID-LSGKLAFTTASSKGIGFGVARVLA-----RAGADVILLSRNE 42 (263)
T ss_pred CCccC-CCCCEEEEeCCCCcHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 56665 567899999999999999999999 7999999999863
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.5e-08 Score=83.52 Aligned_cols=37 Identities=27% Similarity=0.187 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 6 l~~k~vlITGas~gIG~~la~~la-----~~G~~Vvl~~R~~ 42 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFA-----RRGAKVVLLARGE 42 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 456899999999999999999999 7999999999874
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.4e-08 Score=80.87 Aligned_cols=34 Identities=15% Similarity=0.154 Sum_probs=31.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+++||||+|+||.+++++|+ +.|++|+.++|+.
T Consensus 1 k~vlItGas~giG~~la~~la-----~~G~~vv~~~r~~ 34 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLA-----AQGAELFLTDRDA 34 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 479999999999999999999 6899999998864
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.3e-08 Score=76.54 Aligned_cols=34 Identities=24% Similarity=0.360 Sum_probs=29.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
.+|++|||||+|+||++++++|+ +.|++|+++.+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~-----~~G~~vv~~~~ 35 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLH-----KDGFKVVAGCG 35 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HcCCEEEEEcC
Confidence 45789999999999999999999 78999887543
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.6e-08 Score=77.78 Aligned_cols=35 Identities=31% Similarity=0.306 Sum_probs=31.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+++|||||+|+||++++++|+ +.|++|++++|+..
T Consensus 2 ~~vlItGasggiG~~ia~~l~-----~~G~~v~~~~r~~~ 36 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLL-----QPGIAVLGVARSRH 36 (243)
T ss_pred ceEEEecCCcchHHHHHHHHH-----hCCCEEEEEecCcc
Confidence 489999999999999999999 68999999998743
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.3e-08 Score=81.08 Aligned_cols=36 Identities=25% Similarity=0.109 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~-----~~G~~vi~~~r~ 39 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALA-----QEGAYVLAVDIA 39 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCc
Confidence 457899999999999999999999 799999999987
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.2e-08 Score=81.65 Aligned_cols=37 Identities=24% Similarity=0.218 Sum_probs=33.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+++++||||+++||.+++++|+ ..|++|+.++|+.
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La-----~~G~~Vil~~R~~ 48 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLA-----AAGAEVILPVRNR 48 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 356899999999999999999999 7999999999864
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.6e-08 Score=79.03 Aligned_cols=32 Identities=25% Similarity=0.269 Sum_probs=30.0
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++|||||+|+||+++++.|+ ++|++|+.++|+
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~-----~~G~~v~~~~r~ 32 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMA-----EQGAKVFLTDIN 32 (251)
T ss_pred CEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCC
Confidence 48999999999999999999 689999999987
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.2e-08 Score=80.51 Aligned_cols=35 Identities=20% Similarity=0.111 Sum_probs=32.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.++++|||||+|+||.+++++|+ +.|++|+.++|+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~-----~~G~~v~~~~~~ 48 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALA-----KAGADIIITTHG 48 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCC
Confidence 46899999999999999999999 799999999886
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.5e-08 Score=79.22 Aligned_cols=34 Identities=24% Similarity=0.187 Sum_probs=29.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
|+|++|||||+|+||.++++.|+ +.|++|+.+.+
T Consensus 1 m~k~ilItGas~giG~~la~~l~-----~~g~~v~~~~~ 34 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAA-----ARGWSVGINYA 34 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHH-----HCCCEEEEEeC
Confidence 45789999999999999999999 68999877654
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=6e-08 Score=77.38 Aligned_cols=37 Identities=19% Similarity=0.125 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~ 40 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAA-----RDGANIVIAAKTA 40 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeccc
Confidence 345799999999999999999999 7899999999864
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.8e-08 Score=79.90 Aligned_cols=37 Identities=19% Similarity=0.120 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~-----~~G~~vv~~~~~~ 44 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYA-----KAGATIVFNDINQ 44 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCH
Confidence 456899999999999999999999 7999999988865
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.9e-08 Score=79.74 Aligned_cols=88 Identities=18% Similarity=0.039 Sum_probs=61.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------CC--C---------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------WF--P--------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~~--~--------------- 54 (176)
+.++++|||||+|+||.+++++|+ ++|++|++++|+.... +. .
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~-----~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 82 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFA-----EAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAV 82 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 456899999999999999999999 7899999999875310 00 0
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
.+.+ .++..+.+++|+.++.++++++...+....+..+++++||.
T Consensus 83 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~ 148 (263)
T PRK07814 83 EAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISST 148 (263)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccc
Confidence 0000 11234568899999999999987531100134678888874
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.3e-08 Score=79.14 Aligned_cols=37 Identities=24% Similarity=0.143 Sum_probs=32.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ ++|+.|+...|+.
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~-----~~g~~v~~~~~~~ 40 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLH-----AQGAIVGLHGTRV 40 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEcCCH
Confidence 346799999999999999999999 7899888877753
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.5e-08 Score=78.51 Aligned_cols=43 Identities=19% Similarity=0.101 Sum_probs=35.9
Q ss_pred CCcCCCC--CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 1 MEKQDQN--PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 1 ~~~~~~~--~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|...+++ .++++|||||+|+||++++++|. +.|++|+.++|+.
T Consensus 1 ~~~~~~~~l~~k~vlVtG~s~gIG~~la~~l~-----~~G~~vv~~~r~~ 45 (255)
T PRK06113 1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFA-----TAGASVVVSDINA 45 (255)
T ss_pred CCCccccCcCCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEeCCH
Confidence 4445444 36899999999999999999999 7899999888764
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.2e-08 Score=78.68 Aligned_cols=36 Identities=31% Similarity=0.270 Sum_probs=33.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++++|||||+|.||.+++++|+ +.|++|+.++|+.
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~-----~~G~~v~~~~r~~ 40 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFA-----REGAKVVVGARRQ 40 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 45799999999999999999999 7999999999864
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.1e-08 Score=76.80 Aligned_cols=131 Identities=9% Similarity=0.020 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CC--------C--C--------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WF--------P--T-------------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~--------~--~-------------- 55 (176)
+.++++|||||+|.||++++++|+ +.|++|++++|..... .. + +
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLA-----EAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 446899999999999999999999 7899999887653210 00 0 0
Q ss_pred ----Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 56 ----ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 56 ----~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
+.+ .+++.+.+++|+.++.++++++...+.....-.+++++||...+...
T Consensus 83 ~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 152 (253)
T PRK08993 83 FGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG---------- 152 (253)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC----------
Confidence 000 12345678999999988888876542101112478888886554311
Q ss_pred CCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~ 162 (176)
+. .+ .+...+.+.+.+.+ + ...|+++..++|+.+--+
T Consensus 153 -----~~---~~--~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~ 194 (253)
T PRK08993 153 -----IR---VP--SYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATN 194 (253)
T ss_pred -----CC---Cc--chHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCc
Confidence 10 00 11112222222222 2 346899999999999654
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.8e-08 Score=90.31 Aligned_cols=37 Identities=27% Similarity=0.153 Sum_probs=33.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ ..|++|++++|+.
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~-----~~Ga~Vvl~~r~~ 456 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLA-----AEGACVVLADLDE 456 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHH-----HCcCEEEEEeCCH
Confidence 356899999999999999999999 6899999999875
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=6.5e-08 Score=76.28 Aligned_cols=35 Identities=23% Similarity=0.235 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++|++|||||+|+||++++++|+ +.|++|+.+.|+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~-----~~g~~v~~~~~~ 42 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLA-----AHGFDVAVHYNR 42 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCC
Confidence 45789999999999999999999 799999887664
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.3e-08 Score=78.26 Aligned_cols=36 Identities=17% Similarity=0.062 Sum_probs=33.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..+++|||||+|+||.+++++|+ +.|++|++++|+.
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~-----~~G~~Vi~~~r~~ 46 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYA-----RHGATVILLGRTE 46 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCcEEEEeCCH
Confidence 46899999999999999999999 6899999999874
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.9e-08 Score=78.94 Aligned_cols=36 Identities=31% Similarity=0.193 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..+++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~-----~~G~~v~~~~r~~ 41 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFA-----REGAKVVVADRDA 41 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 46899999999999999999999 7899999999874
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=7.4e-08 Score=75.35 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=30.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+|++|||||+|+||++++++|+ +.|++|+.+.|+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~-----~~G~~vv~~~~~ 38 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFA-----REGARVVVNYHQ 38 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHH-----HCCCeEEEEcCC
Confidence 4789999999999999999999 799999876553
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=8e-08 Score=75.96 Aligned_cols=36 Identities=28% Similarity=0.347 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++|||||+|+||.+++++|+ ++|++|++++|+.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~-----~~G~~V~~~~r~~ 39 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALA-----AAGARLLLVGRNA 39 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 46789999999999999999999 7999999999875
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.3e-07 Score=73.32 Aligned_cols=36 Identities=17% Similarity=0.304 Sum_probs=32.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
++..+.||+||+|..+|+.+. ..||+|.-++|+...
T Consensus 3 ~k~~vfgg~gflg~~ic~~a~-----~sgy~vvsvsrsgas 38 (283)
T KOG4288|consen 3 PKLIVFGGNGFLGKRICQEAV-----TSGYQVVSVSRSGAS 38 (283)
T ss_pred ccceeecccccchhhhhHHHH-----hcCceEEEeccccCC
Confidence 578899999999999999999 689999999998654
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.7e-08 Score=80.43 Aligned_cols=94 Identities=13% Similarity=0.007 Sum_probs=64.1
Q ss_pred CcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C----------CC-----------
Q 030483 2 EKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W----------FP----------- 54 (176)
Q Consensus 2 ~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~----------~~----------- 54 (176)
..+..+.++++|||||+|.||.+++++|. +.|++|+.++|+.... . .+
T Consensus 2 ~~~~~l~gk~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~ 76 (296)
T PRK05872 2 PPMTSLAGKVVVVTGAARGIGAELARRLH-----ARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAA 76 (296)
T ss_pred CCCCCCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHH
Confidence 34444567899999999999999999999 7999999999864310 0 00
Q ss_pred ---------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 55 ---------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 55 ---------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
.+.+ .++.++.+++|+.++.++++++...+. .+..+|+++||...+
T Consensus 77 ~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~--~~~g~iv~isS~~~~ 147 (296)
T PRK05872 77 EEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALI--ERRGYVLQVSSLAAF 147 (296)
T ss_pred HHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH--HcCCEEEEEeCHhhc
Confidence 0000 112345688999999998888765411 112578888886543
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=4.3e-08 Score=78.15 Aligned_cols=36 Identities=31% Similarity=0.285 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~-----~~G~~V~~~~r~~ 44 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELA-----RAGAKVAILDRNQ 44 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 46899999999999999999999 7999999999864
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.4e-08 Score=77.63 Aligned_cols=35 Identities=20% Similarity=0.203 Sum_probs=32.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+|++|||||+|+||++++++|+ +.|+.|++++|+.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~-----~~G~~Vi~~~r~~ 35 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFA-----EEGANVVITGRTK 35 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 3789999999999999999999 7999999998864
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.8e-08 Score=77.27 Aligned_cols=37 Identities=24% Similarity=0.144 Sum_probs=33.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~-----~~G~~V~~~~r~~ 42 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLL-----EAGASVAICGRDE 42 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCH
Confidence 457899999999999999999999 7999999999875
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.7e-08 Score=87.50 Aligned_cols=37 Identities=24% Similarity=0.160 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||.+++++|+ ..|++|++++|++
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~-----~~G~~V~~~~r~~ 405 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVA-----EAGATVFLVARNG 405 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 446899999999999999999999 6899999999875
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.2e-07 Score=73.29 Aligned_cols=35 Identities=37% Similarity=0.580 Sum_probs=32.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++++||||+|+||++++++|+ ..|++|++++|++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~-----~~G~~V~~~~r~~~ 36 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLL-----ERGWQVTATVRGPQ 36 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHH-----hCCCEEEEEeCCCc
Confidence 689999999999999999999 68999999999764
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.6e-07 Score=73.47 Aligned_cols=87 Identities=24% Similarity=0.126 Sum_probs=61.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CC--C---------C---------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WF--P---------T--------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~---------~--------------- 55 (176)
.+|.++|||||+-||.+.+++|. +.||+|+...|+.... .. . +
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~-----~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~ 79 (246)
T COG4221 5 KGKVALITGASSGIGEATARALA-----EAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEF 79 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHH-----HCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhh
Confidence 35789999999999999999999 7999999999985421 11 0 0
Q ss_pred ---Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 56 ---ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 56 ---~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
+.+ .++|+..+++|+.|+.+...++.-.+- ..+-.+|+.+||++
T Consensus 80 g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~-~r~~G~IiN~~SiA 142 (246)
T COG4221 80 GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMV-ERKSGHIINLGSIA 142 (246)
T ss_pred CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHH-hcCCceEEEecccc
Confidence 000 235677899999998777766554321 11335899888864
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=98.73 E-value=1e-07 Score=73.77 Aligned_cols=84 Identities=19% Similarity=0.124 Sum_probs=57.6
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---C-------C-CC-------------------------
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W-------F-PT------------------------- 55 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~-------~-~~------------------------- 55 (176)
+||||++|+||++++++|+ ++||+|++++|+.... + . ..
T Consensus 1 vlItG~~g~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLA-----KEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELG 75 (239)
T ss_pred CEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 5899999999999999999 7899999998875210 0 0 00
Q ss_pred --Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 56 --ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 56 --~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
+.+ .+.+++.+++|+.++.++++++..... ..+.++++++||...
T Consensus 76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~~sS~~~ 138 (239)
T TIGR01830 76 PIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMI-KQRSGRIINISSVVG 138 (239)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCeEEEEECCccc
Confidence 000 012345678999999999998876410 113468999988543
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=2e-07 Score=71.93 Aligned_cols=129 Identities=13% Similarity=0.079 Sum_probs=77.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C------C--------------CCCcc--
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W------F--------------PTALV-- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~------~--------------~~~~v-- 58 (176)
+++|||||+|+||++++++|+ +.|++|++++|+.... . . ..+.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYR-----ADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHH-----hCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence 589999999999999999999 6899999999864320 0 0 00000
Q ss_pred ----c------------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee-ecccccCCCccCCCCCCCcc
Q 030483 59 ----Q------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH-YMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 59 ----~------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~-yg~~~~d~~~~g~~~~~~~p 121 (176)
. ++++..+++|+.++.++++++...+. . .-.+++++||... |+. .+
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~g~iv~isS~~~~~~~---------------~~ 139 (222)
T PRK06953 77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVE-A-AGGVLAVLSSRMGSIGD---------------AT 139 (222)
T ss_pred CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhh-c-cCCeEEEEcCccccccc---------------cc
Confidence 0 12345789999999999999876421 1 1235777776432 221 01
Q ss_pred ccCCCCCCCCCcchHHHHHHHHh---hCCCceEEEeccCceEeCC
Q 030483 122 FKEDSSRLPFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 122 ~~E~~~~~~~~~~y~~~e~~~~~---~~~g~~~~ivRp~~v~G~~ 163 (176)
. .+..++.......+.+++. ...++++..++|+.+.-+.
T Consensus 140 ~---~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~ 181 (222)
T PRK06953 140 G---TTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDM 181 (222)
T ss_pred C---CCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCC
Confidence 0 0000111222223333333 2347889999999987654
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=8.5e-08 Score=75.08 Aligned_cols=34 Identities=21% Similarity=0.202 Sum_probs=31.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++|||||+|+||++++++|+ ++|++|++++|++
T Consensus 2 k~vlItGasggiG~~ia~~l~-----~~g~~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLL-----EKGTHVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHH-----hcCCEEEEEeCCc
Confidence 589999999999999999999 6899999999976
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.1e-08 Score=77.08 Aligned_cols=112 Identities=23% Similarity=0.269 Sum_probs=76.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------CCC---------------C------cc
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPT---------------A------LV 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~---------------~------~v 58 (176)
.|..||||-||.-|+.|++.|+ .+||+|+++.|+....- ++. + ++
T Consensus 28 rkvALITGItGQDGSYLaEfLL-----~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I 102 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLL-----SKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLI 102 (376)
T ss_pred ceEEEEecccCCCchHHHHHHH-----hCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHH
Confidence 4578999999999999999999 79999999999865420 000 0 00
Q ss_pred --------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 59 --------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 59 --------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
.+-++...++...||.++|+|++... ...+| ++--+|++..||.. .
T Consensus 103 ~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~-l~~~V-rfYQAstSElyGkv------------~ 168 (376)
T KOG1372|consen 103 STIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACR-LTEKV-RFYQASTSELYGKV------------Q 168 (376)
T ss_pred hccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcC-cccce-eEEecccHhhcccc------------c
Confidence 22234455677889999999998761 01233 45567788888743 2
Q ss_pred CccccCCCCCCCCCcchHHHHHH
Q 030483 119 EVPFKEDSSRLPFPNFYYELEDV 141 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~~e~~ 141 (176)
..|-+|..|.. |.+.|+..|.
T Consensus 169 e~PQsE~TPFy--PRSPYa~aKm 189 (376)
T KOG1372|consen 169 EIPQSETTPFY--PRSPYAAAKM 189 (376)
T ss_pred CCCcccCCCCC--CCChhHHhhh
Confidence 46788888764 4444554443
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.3e-08 Score=74.92 Aligned_cols=37 Identities=27% Similarity=0.116 Sum_probs=33.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|++|||||+|+||++++++|+ +.|++|++++|+..
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~ 37 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLL-----AQGQPVIVSYRTHY 37 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHH-----HCCCeEEEEeCCch
Confidence 56799999999999999999999 79999999998753
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=6.1e-08 Score=76.57 Aligned_cols=37 Identities=22% Similarity=0.071 Sum_probs=32.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+..+++|||||+|.||++++++|+ +.|+.|+.+.|+.
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~-----~~G~~vvi~~~~~ 41 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFG-----KEKAKVVINYRSD 41 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCC
Confidence 467899999999999999999999 7999988887753
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.6e-08 Score=80.56 Aligned_cols=37 Identities=27% Similarity=0.209 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|.||++++++|+ +.|++|+.++|+.
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la-----~~G~~Vvl~~R~~ 41 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFA-----RRGARLVLAARDE 41 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 446899999999999999999999 7999999999864
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.4e-07 Score=70.60 Aligned_cols=126 Identities=15% Similarity=0.195 Sum_probs=77.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCCCCCCCCcc----------------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWFPTALV---------------------------- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v---------------------------- 58 (176)
.++.++|.||||..|+.|++.+.+ ..-+ .|+++.|+..........+
T Consensus 17 q~~s~fvlGAtG~~G~~llk~~~E----~~~FSKV~~i~RR~~~d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLg 92 (238)
T KOG4039|consen 17 QNMSGFVLGATGLCGGGLLKHAQE----APQFSKVYAILRRELPDPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALG 92 (238)
T ss_pred hccceEEEeccccccHHHHHHHHh----cccceeEEEEEeccCCCccccceeeeEEechHHHHHHHhhhcCCceEEEeec
Confidence 357899999999999999999994 3334 5999999854322111110
Q ss_pred ----cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcc
Q 030483 59 ----QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNF 134 (176)
Q Consensus 59 ----~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~ 134 (176)
..-.+.++++.-.-...+.+++++. +|++|+++||..+- .++.. -++..
T Consensus 93 TTRgkaGadgfykvDhDyvl~~A~~AKe~-----Gck~fvLvSS~GAd---------------------~sSrF-lY~k~ 145 (238)
T KOG4039|consen 93 TTRGKAGADGFYKVDHDYVLQLAQAAKEK-----GCKTFVLVSSAGAD---------------------PSSRF-LYMKM 145 (238)
T ss_pred ccccccccCceEeechHHHHHHHHHHHhC-----CCeEEEEEeccCCC---------------------cccce-eeeec
Confidence 1111223445444455677777765 79999999985321 11111 12333
Q ss_pred hHHHHHHHHhhCCCc-eEEEeccCceEeCCCCC
Q 030483 135 YYELEDVSASYSPAI-TYSVHRSSVIIGASPRS 166 (176)
Q Consensus 135 y~~~e~~~~~~~~g~-~~~ivRp~~v~G~~~~~ 166 (176)
..+.|+-+.+ ..+ +++|+||+.+.|.+..+
T Consensus 146 KGEvE~~v~e--L~F~~~~i~RPG~ll~~R~es 176 (238)
T KOG4039|consen 146 KGEVERDVIE--LDFKHIIILRPGPLLGERTES 176 (238)
T ss_pred cchhhhhhhh--ccccEEEEecCcceecccccc
Confidence 3444554443 334 48999999999988744
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.1e-08 Score=80.15 Aligned_cols=120 Identities=15% Similarity=0.029 Sum_probs=78.8
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-----------------C-CCC----------c-c---
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------------F-PTA----------L-V--- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------------~-~~~----------~-v--- 58 (176)
.+-|+|||||+|+.+|.+|. ..|-+|+.-.|.+.... + .++ . |
T Consensus 63 VaTVFGAtGFlGryvvnkla-----k~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINL 137 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLA-----KMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINL 137 (391)
T ss_pred EEEEecccccccHHHHHHHh-----hcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEe
Confidence 36689999999999999999 69999999888765310 0 010 0 0
Q ss_pred ----cCcH-HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCc
Q 030483 59 ----QESE-EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPN 133 (176)
Q Consensus 59 ----~~~~-~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~ 133 (176)
+++. =.+.++|+.+.+.+...|++. ++.+++.+|...+ -+.-.+. .-.
T Consensus 138 IGrd~eTknf~f~Dvn~~~aerlAricke~-----GVerfIhvS~Lga-------------------nv~s~Sr---~Lr 190 (391)
T KOG2865|consen 138 IGRDYETKNFSFEDVNVHIAERLARICKEA-----GVERFIHVSCLGA-------------------NVKSPSR---MLR 190 (391)
T ss_pred eccccccCCcccccccchHHHHHHHHHHhh-----Chhheeehhhccc-------------------cccChHH---HHH
Confidence 1111 125679999999999999988 7999998875311 0100000 112
Q ss_pred chHHHHHHHHhhCCCceEEEeccCceEeCCC
Q 030483 134 FYYELEDVSASYSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 134 ~y~~~e~~~~~~~~g~~~~ivRp~~v~G~~~ 164 (176)
+.+..|..+++ .=-+.+|+||+.|||...
T Consensus 191 sK~~gE~aVrd--afPeAtIirPa~iyG~eD 219 (391)
T KOG2865|consen 191 SKAAGEEAVRD--AFPEATIIRPADIYGTED 219 (391)
T ss_pred hhhhhHHHHHh--hCCcceeechhhhcccch
Confidence 23444555543 224589999999999875
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=98.70 E-value=5e-08 Score=76.46 Aligned_cols=34 Identities=29% Similarity=0.240 Sum_probs=31.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++|||||+|+||.+|+++|+ +.|++|+.+.|+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~-----~~G~~v~~~~r~~ 34 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLA-----KDGFAVAVADLNE 34 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 579999999999999999999 7999999998864
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.9e-07 Score=72.43 Aligned_cols=33 Identities=21% Similarity=0.343 Sum_probs=30.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
|++|||||+|+||++++++|+ ..|++|+++.|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~-----~~G~~v~~~~r~ 33 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLA-----KDGYRVAANCGP 33 (242)
T ss_pred CEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCC
Confidence 579999999999999999999 799999998883
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=5.4e-08 Score=76.53 Aligned_cols=37 Identities=30% Similarity=0.101 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~-----~~G~~V~~~~r~~ 43 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYV-----EAGAQVAIAARHL 43 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCH
Confidence 456899999999999999999999 7999999998864
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.66 E-value=7.6e-08 Score=74.82 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=29.0
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+|||||+|+||.+++++|+ ++|++|+.++|+.
T Consensus 1 vlItGas~giG~~~a~~l~-----~~G~~v~~~~~~~ 32 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLA-----ADGFEICVHYHSG 32 (239)
T ss_pred CEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCC
Confidence 5899999999999999999 7999999888753
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=8e-08 Score=75.00 Aligned_cols=37 Identities=22% Similarity=0.056 Sum_probs=33.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||.++++.|+ +.|+.|+.++|+.
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~-----~~G~~vi~~~r~~ 39 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLA-----QKGAKLALIDLNQ 39 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 456899999999999999999999 6899999998864
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.1e-07 Score=79.73 Aligned_cols=81 Identities=19% Similarity=0.233 Sum_probs=59.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC--CC----C--------Cc-----------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FP----T--------AL----------------- 57 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~~----~--------~~----------------- 57 (176)
..+|||+||||.+|+-+++.|+ ++|+.|+++.|+..... .. + +.
T Consensus 79 ~~~VlVvGatG~vG~~iv~~ll-----krgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~ 153 (411)
T KOG1203|consen 79 PTTVLVVGATGKVGRRIVKILL-----KRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKG 153 (411)
T ss_pred CCeEEEecCCCchhHHHHHHHH-----HCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccc
Confidence 3589999999999999999999 79999999999754320 00 0 00
Q ss_pred ---c------cCcHH---HHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 58 ---V------QESEE---VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 58 ---v------~~~~~---~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
+ ....+ .-..+.-.++.|+++||+.+ +++|++++|+.
T Consensus 154 ~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-----Gvk~~vlv~si 202 (411)
T KOG1203|consen 154 VVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-----GVKRVVLVGSI 202 (411)
T ss_pred ceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-----CCceEEEEEee
Confidence 0 11111 12356778999999999887 79999999753
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.1e-07 Score=77.97 Aligned_cols=35 Identities=31% Similarity=0.252 Sum_probs=32.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++++||||||.||.+++++|+ ++|++|+.++|+.
T Consensus 53 g~~~lITGAs~GIG~alA~~La-----~~G~~Vil~~R~~ 87 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLA-----RKGLNLVLVARNP 87 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-----HCCCCEEEEECCH
Confidence 5789999999999999999999 7999999999864
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=7.8e-07 Score=67.48 Aligned_cols=81 Identities=19% Similarity=0.117 Sum_probs=56.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----CC------------CCCcc---------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WF------------PTALV--------------- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~------------~~~~v--------------- 58 (176)
|++|||||+|.||.+++++|. ++ ++|++++|+.... .. +.+.+
T Consensus 1 ~~vlItGas~giG~~la~~l~-----~~-~~vi~~~r~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~ 74 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELS-----KR-HEVITAGRSSGDVQVDITDPASIRALFEKVGKVDAVVSAAGKVHFAPLAEM 74 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHH-----hc-CcEEEEecCCCceEecCCChHHHHHHHHhcCCCCEEEECCCCCCCCchhhC
Confidence 379999999999999999999 56 8999999865321 00 01111
Q ss_pred -cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 59 -QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 59 -~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
.+++.+.+++|+.++.++++++...+. +-.+++++||.
T Consensus 75 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~g~iv~iss~ 113 (199)
T PRK07578 75 TDEDFNVGLQSKLMGQVNLVLIGQHYLN---DGGSFTLTSGI 113 (199)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCeEEEEccc
Confidence 113445688999999999988876421 22467877764
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.6e-07 Score=67.54 Aligned_cols=80 Identities=20% Similarity=0.061 Sum_probs=56.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCCCCC-------------C------C--------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWF-------------P------T-------------- 55 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~-------------~------~-------------- 55 (176)
++++||||+|+||.+++++|+ +.|. .|+.++|+...... . +
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~-----~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLA-----ERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAI 75 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHH-----HhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999 5775 68888886432110 0 0
Q ss_pred -------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 56 -------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 56 -------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
+.+ .++....+++|+.++.++++++... +.++++++||.
T Consensus 76 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~ii~~ss~ 137 (180)
T smart00822 76 PARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-----PLDFFVLFSSV 137 (180)
T ss_pred HHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-----CcceEEEEccH
Confidence 000 0123456889999999999998665 45678888774
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.4e-07 Score=75.64 Aligned_cols=36 Identities=33% Similarity=0.433 Sum_probs=32.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~ 48 (176)
|++++|||||++.||.+++++|+ ..| ++|+.++|+.
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~-----~~G~~~V~l~~r~~ 38 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALA-----ATGEWHVIMACRDF 38 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HcCCCEEEEEeCCH
Confidence 46799999999999999999999 689 9999998864
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.61 E-value=8.7e-08 Score=82.96 Aligned_cols=124 Identities=12% Similarity=-0.002 Sum_probs=80.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C-CC---------C----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W-FP---------T---------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~---------~---------------- 55 (176)
.+|++|||||+|.||.+++++|+ +.|++|+.++|+.... . .. +
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 342 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFA-----AAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWG 342 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 36899999999999999999999 7999999999864210 0 00 0
Q ss_pred --Ccc------c-----------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCC
Q 030483 56 --ALV------Q-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 116 (176)
Q Consensus 56 --~~v------~-----------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~ 116 (176)
+.+ . +++++.+++|+.++.++++++...+ .+-.+|+++||...+.
T Consensus 343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~------------- 406 (520)
T PRK06484 343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM---SQGGVIVNLGSIASLL------------- 406 (520)
T ss_pred CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh---ccCCEEEEECchhhcC-------------
Confidence 000 0 1234568999999999988887753 1235789998864431
Q ss_pred CCCccccCCCCCCCCCcchHH----HHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 117 PYEVPFKEDSSRLPFPNFYYE----LEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 117 ~~~~p~~E~~~~~~~~~~y~~----~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+. + ....|.. .+.+.+ + ...|+++..++|+.|..+.
T Consensus 407 ----~~----~---~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 451 (520)
T PRK06484 407 ----AL----P---PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPA 451 (520)
T ss_pred ----CC----C---CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCch
Confidence 10 0 0112322 222222 2 3568999999999997764
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.1e-07 Score=71.93 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~ 39 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFV-----AEGARVAVLDKSA 39 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 346899999999999999999999 7999999999864
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.6e-07 Score=84.15 Aligned_cols=37 Identities=24% Similarity=0.140 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La-----~~Ga~Vvi~~r~~ 448 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLA-----AEGAHVVLADLNL 448 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----hCCCEEEEEeCCH
Confidence 346899999999999999999999 7899999999864
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.9e-07 Score=73.86 Aligned_cols=37 Identities=27% Similarity=0.153 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~-----~~G~~V~~~~r~~ 40 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFL-----AEGARVAVLERSA 40 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 346899999999999999999999 7999999999864
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=3e-07 Score=72.63 Aligned_cols=36 Identities=17% Similarity=0.069 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCh-HHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTG-ISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatG-fiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++|||||+| -||++++++|+ +.|++|+.++|+.
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~-----~~G~~V~~~~~~~ 52 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRAL-----EEGARVVISDIHE 52 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 368999999998 59999999999 7999999988764
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=1e-06 Score=69.67 Aligned_cols=37 Identities=14% Similarity=-0.010 Sum_probs=32.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+.+|++|||||+++||++++++|+ +.|++|+.+.|+
T Consensus 5 ~l~~k~vlItGas~gIG~~ia~~l~-----~~G~~v~~~~~~ 41 (260)
T PRK08416 5 EMKGKTLVISGGTRGIGKAIVYEFA-----QSGVNIAFTYNS 41 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCC
Confidence 3567899999999999999999999 799999887664
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.1e-07 Score=70.95 Aligned_cols=80 Identities=18% Similarity=0.072 Sum_probs=56.3
Q ss_pred EEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CCC-----------------------CCcc--
Q 030483 13 LIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WFP-----------------------TALV-- 58 (176)
Q Consensus 13 LVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~-----------------------~~~v-- 58 (176)
|||||+|+||++++++|+ +.|++|++++|+.... ... .+.+
T Consensus 1 lItGas~~iG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~ 75 (230)
T PRK07041 1 LVVGGSSGIGLALARAFA-----AEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVI 75 (230)
T ss_pred CeecCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence 699999999999999999 7999999999863210 000 0000
Q ss_pred --------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 59 --------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 59 --------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
.++.++.+++|+.++.++.++.... +..+|+++||...|
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~g~iv~~ss~~~~ 128 (230)
T PRK07041 76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-----PGGSLTFVSGFAAV 128 (230)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-----CCeEEEEECchhhc
Confidence 0123456889999999998854433 35789999886554
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.2e-06 Score=73.17 Aligned_cols=89 Identities=13% Similarity=0.037 Sum_probs=61.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------CC------C------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WF------P------------------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~------~------------------ 54 (176)
..++++|||||+|.||.+++++|. +.|++|++++|..... .. +
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~-----~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 282 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLA-----RDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERH 282 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhC
Confidence 356899999999999999999999 7899999998743110 00 0
Q ss_pred --CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 55 --TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 55 --~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
.+.+ .+.++..+++|+.++.++.+++..... ..+-.+|+++||...
T Consensus 283 g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~g~iv~~SS~~~ 346 (450)
T PRK08261 283 GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGA-LGDGGRIVGVSSISG 346 (450)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh-hcCCCEEEEECChhh
Confidence 0001 112345688999999999999876300 112257888887543
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=7.7e-07 Score=70.30 Aligned_cols=71 Identities=17% Similarity=0.118 Sum_probs=52.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CC------C-------------CCcc----
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WF------P-------------TALV---- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~------~-------------~~~v---- 58 (176)
+++++|||||+|+||++++++|+ +.|++|++++|+.... .. + .+.+
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnA 87 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFR-----AKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNH 87 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-----HCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECC
Confidence 46899999999999999999999 7999999999875110 00 0 0001
Q ss_pred ---------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ---------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ---------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
.+++.+.+++|+.++.++++++...
T Consensus 88 G~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 121 (245)
T PRK12367 88 GINPGGRQDPENINKALEINALSSWRLLELFEDI 121 (245)
T ss_pred ccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 1234567899999999988887664
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.1e-06 Score=70.31 Aligned_cols=83 Identities=18% Similarity=0.030 Sum_probs=56.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CC-CC----------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WF-PT---------------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~-~~---------------------- 55 (176)
|+|+++|||+ |+||++++++|. .|++|++++|+.... .. ..
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~ 73 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG------AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQT 73 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHh
Confidence 6789999998 689999999997 589999999864210 00 00
Q ss_pred ----Ccc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 56 ----ALV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 56 ----~~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
+.+ ..++.+.+++|+.++.++++++...+. . + .+++++||..
T Consensus 74 ~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~-~-g~iv~isS~~ 128 (275)
T PRK06940 74 LGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIA-P-G-GAGVVIASQS 128 (275)
T ss_pred cCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHh-h-C-CCEEEEEecc
Confidence 000 224567899999999999998876532 1 1 3445566543
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.5e-06 Score=67.56 Aligned_cols=143 Identities=15% Similarity=0.160 Sum_probs=88.9
Q ss_pred CCCeEEEEcCChHHHHHHHH-----HhhCCCCCCCCcEEEEEecCCCCC---CCC-----CC--c---c----------c
Q 030483 8 PKSVALIIGVTGISGLSLAE-----ALKNPTTPGSPWKVYGAARRPPPG---WFP-----TA--L---V----------Q 59 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~-----~L~~~~~~~~g~~V~~l~R~~~~~---~~~-----~~--~---v----------~ 59 (176)
+.++.++-+++|+|+..|.. ++-+ -...+.|+|+.++|++.+. |.+ .+ . + .
T Consensus 11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~-~~~a~~h~vtv~sR~pg~~ritw~el~~~Gip~sc~a~vna~g~n~l~P~ 89 (315)
T KOG3019|consen 11 KSRDAVSNWSNGIIRENLGSETSCCHDTN-VHSADNHAVTVLSRSPGKARITWPELDFPGIPISCVAGVNAVGNNALLPI 89 (315)
T ss_pred ccccCCCCccccchhccccCcccccccCC-CCcccccceEEEecCCCCcccccchhcCCCCceehHHHHhhhhhhccCch
Confidence 45678899999999988877 3332 1223558999999998763 432 11 0 0 1
Q ss_pred CcHHHHHHHHH-----HHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcc
Q 030483 60 ESEEVNIFKNS-----TMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNF 134 (176)
Q Consensus 60 ~~~~~~~~~N~-----~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~ 134 (176)
..+...++.|+ ..|..+++++.++ ....+.+|++|++++|-.. ....|+|+++......+
T Consensus 90 rRWsp~fqkev~gSRi~~t~~la~aI~~a---Pq~~~~~Vlv~gva~y~pS------------~s~eY~e~~~~qgfd~~ 154 (315)
T KOG3019|consen 90 RRWSPEFQKEVKGSRIRVTSKLADAINNA---PQEARPTVLVSGVAVYVPS------------ESQEYSEKIVHQGFDIL 154 (315)
T ss_pred hhcCHHHHHHhhcceeeHHHHHHHHHhcC---CCCCCCeEEEEeeEEeccc------------cccccccccccCChHHH
Confidence 12333344443 3456788888887 4445688999999999632 24568888875422111
Q ss_pred hH---HHHHHHHhhCCCceEEEeccCceEeCCCCC
Q 030483 135 YY---ELEDVSASYSPAITYSVHRSSVIIGASPRS 166 (176)
Q Consensus 135 y~---~~e~~~~~~~~g~~~~ivRp~~v~G~~~~~ 166 (176)
-. ..|..........+.+++|.+.|.|-+.+.
T Consensus 155 srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa 189 (315)
T KOG3019|consen 155 SRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGA 189 (315)
T ss_pred HHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcc
Confidence 00 112211112445899999999999998754
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.6e-06 Score=65.79 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=29.9
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 7 ~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
..+|++|||||+| .||++++++|+ +.|++|+.+.
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~-----~~G~~vi~~~ 39 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELA-----EAGADIFFTY 39 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHH-----HCCCeEEEEe
Confidence 5578999999995 79999999999 7999988764
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=7.7e-07 Score=70.25 Aligned_cols=34 Identities=18% Similarity=0.136 Sum_probs=31.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++|||||+|.||++++++|+ ++|++|+.++|+.
T Consensus 1 m~vlItGas~gIG~aia~~l~-----~~G~~V~~~~r~~ 34 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELL-----KKGARVVISSRNE 34 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 479999999999999999999 7999999999874
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.37 E-value=5.4e-06 Score=65.73 Aligned_cols=33 Identities=27% Similarity=0.313 Sum_probs=30.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++++||||+|+||++++++|+ +.|++|+++.|+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~-----~~G~~V~~~~~~ 34 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALH-----QEGYRVVLHYHR 34 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHH-----hCCCeEEEEcCC
Confidence 689999999999999999999 799999987654
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.1e-06 Score=68.79 Aligned_cols=35 Identities=20% Similarity=0.047 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.++++|||||+|+||++++++|+ +.|++|+..+|+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~-----~~Ga~Vv~~~~~ 45 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLA-----RLGATVVVNDVA 45 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEecCC
Confidence 46899999999999999999999 789999988775
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.1e-06 Score=69.21 Aligned_cols=37 Identities=24% Similarity=0.173 Sum_probs=33.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+..+++|||||+|.||.+++++|+ +.|++|++++|+.
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~-----~~G~~V~~~~r~~ 41 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFA-----AEGCHLHLVARDA 41 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 346899999999999999999999 6899999999864
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.2e-06 Score=76.00 Aligned_cols=37 Identities=22% Similarity=0.213 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+|++|||||++.||.+++++|. +.|++|+.++|+..
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~-----~~G~~V~~~~r~~~ 40 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFA-----RAGDQVVVADRNVE 40 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 35799999999999999999999 79999999988643
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.5e-05 Score=61.72 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=27.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCC--CcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~ 48 (176)
|+++||||+|+||++++++|+ ++ ++.|....|..
T Consensus 1 ~~vlItGas~gIG~~ia~~l~-----~~~~~~~v~~~~~~~ 36 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLL-----ERYPDATVHATYRHH 36 (235)
T ss_pred CEEEEECCCChHHHHHHHHHH-----HhCCCCEEEEEccCC
Confidence 489999999999999999999 45 45666666643
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.2e-06 Score=66.91 Aligned_cols=43 Identities=12% Similarity=0.044 Sum_probs=36.8
Q ss_pred CCcCCCCCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 1 MEKQDQNPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+....+.+|++|||||+ +-||.+++++|+ +.|++|+..+|+.
T Consensus 2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la-----~~G~~v~l~~r~~ 46 (258)
T PRK07533 2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFR-----ALGAELAVTYLND 46 (258)
T ss_pred CCcccccCCCEEEEECCCCCCcHHHHHHHHHH-----HcCCEEEEEeCCh
Confidence 666666678999999998 489999999999 7999998888864
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.9e-06 Score=68.29 Aligned_cols=37 Identities=19% Similarity=0.077 Sum_probs=32.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||++.||++++++|+ +.|++|+.++|+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la-----~~G~~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFA-----AEGARVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEeeCCc
Confidence 457899999999999999999999 7999998887754
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=4.4e-06 Score=65.86 Aligned_cols=36 Identities=17% Similarity=0.119 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|++|||||+ +-||.+++++|+ +.|++|+..+|+
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la-----~~G~~Vi~~~r~ 42 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIK-----DQGATVIYTYQN 42 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHH-----HCCCEEEEecCc
Confidence 456899999999 789999999999 799999998876
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=2e-05 Score=63.00 Aligned_cols=36 Identities=17% Similarity=0.123 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|++|||||++ -||++++++|+ +.|++|+..+|+
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la-----~~Ga~V~~~~r~ 42 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLA-----AQGAELAFTYQG 42 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHH-----hCCCEEEEecCc
Confidence 3468999999996 89999999999 799999988775
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=2e-05 Score=62.34 Aligned_cols=36 Identities=14% Similarity=0.095 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|+++||||+ +-||.+++++|+ +.|++|+..+|+
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la-----~~G~~v~~~~r~ 42 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLH-----NAGAKLVFTYAG 42 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHH-----HCCCEEEEecCc
Confidence 456899999997 789999999999 799999988764
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.14 E-value=7.1e-06 Score=63.34 Aligned_cols=43 Identities=37% Similarity=0.509 Sum_probs=36.5
Q ss_pred CCcCCCCCCCeEEEEcC-ChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 1 MEKQDQNPKSVALIIGV-TGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGa-tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
||-|++. ++|||||+ +|-||.+|+++|. +.|+.|++.+|+-.+
T Consensus 1 ~e~~~~~--k~VlItgcs~GGIG~ala~ef~-----~~G~~V~AtaR~~e~ 44 (289)
T KOG1209|consen 1 SELQSQP--KKVLITGCSSGGIGYALAKEFA-----RNGYLVYATARRLEP 44 (289)
T ss_pred CCcccCC--CeEEEeecCCcchhHHHHHHHH-----hCCeEEEEEccccch
Confidence 5666654 68999887 7999999999999 799999999998654
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.7e-05 Score=62.77 Aligned_cols=35 Identities=14% Similarity=0.075 Sum_probs=30.1
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 7 ~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
+++|++|||||+ +-||++++++|+ +.|++|+...|
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la-----~~G~~v~~~~~ 40 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLH-----AAGAELGITYL 40 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHH-----HCCCEEEEEec
Confidence 456899999986 789999999999 79999987754
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.08 E-value=3.7e-05 Score=61.92 Aligned_cols=37 Identities=32% Similarity=0.244 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|.|+|||||.-||.+++.+|. .+|..++.+.|+.
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la-----~~G~~l~lvar~~ 46 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELA-----KRGAKLVLVARRA 46 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHH-----hCCCceEEeehhh
Confidence 457899999999999999999999 7999877776654
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.1e-05 Score=62.82 Aligned_cols=35 Identities=17% Similarity=0.152 Sum_probs=30.8
Q ss_pred CCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+|++|||||+ +-||.+++++|+ +.|++|+...|+
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la-----~~G~~V~l~~r~ 45 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACR-----AAGAELAFTYQG 45 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHH-----HCCCEEEEEcCc
Confidence 45899999996 789999999999 799999887765
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=9.6e-05 Score=58.52 Aligned_cols=37 Identities=14% Similarity=0.102 Sum_probs=32.2
Q ss_pred CCCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 6 QNPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 6 ~~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+.+|++|||||++ -||.+++++|. +.|++|+...|+
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la-----~~G~~v~~~~r~ 43 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAK-----KHGAELWFTYQS 43 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHH-----HcCCEEEEEeCc
Confidence 35678999999996 79999999999 799999888775
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.4e-05 Score=62.70 Aligned_cols=85 Identities=19% Similarity=0.174 Sum_probs=54.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe--cCCCCC-CC-C---------------------CCcc-----
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA--RRPPPG-WF-P---------------------TALV----- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~--R~~~~~-~~-~---------------------~~~v----- 58 (176)
.++|||||+-|.+|..++..|.. .-|-+-+.++ +.++.. .. + .+++
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~----~yGs~~VILSDI~KPp~~V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSA 119 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRY----MYGSECVILSDIVKPPANVTDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFSA 119 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHH----HhCCccEehhhccCCchhhcccCCchhhhhhccccHHHhhcccccceeeeHHH
Confidence 46899999999999999999884 4565544443 233321 00 0 0111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeec
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 103 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg 103 (176)
..+-....++|++|.-|+++.+.++ +++ +..-|++.++|
T Consensus 120 LLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-----kL~-iFVPSTIGAFG 164 (366)
T KOG2774|consen 120 LLSAVGETNVPLALQVNIRGVHNILQVAAKH-----KLK-VFVPSTIGAFG 164 (366)
T ss_pred HHHHhcccCCceeeeecchhhhHHHHHHHHc-----Cee-EeecccccccC
Confidence 1111234678999999999999998 555 44457776665
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.9e-05 Score=61.59 Aligned_cols=36 Identities=14% Similarity=-0.004 Sum_probs=30.9
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.++++||||| ++-||.+++++|+ +.|++|+...|.
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~-----~~G~~v~~~~~~ 41 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACR-----EQGAELAFTYVV 41 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHH-----HCCCEEEEEcCc
Confidence 45689999997 6689999999999 799999887654
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.03 E-value=2.8e-05 Score=63.71 Aligned_cols=37 Identities=30% Similarity=0.200 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
...++++|||||.-||...+++|. .+|..|+...|+.
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La-----~~Ga~Vv~~~R~~ 69 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELA-----LRGAHVVLACRNE 69 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHH-----hCCCEEEEEeCCH
Confidence 346799999999999999999999 7999999999986
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=3.7e-05 Score=61.22 Aligned_cols=36 Identities=14% Similarity=0.103 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|++|||||++ -||++++++|+ +.|+.|+..+|+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la-----~~G~~vil~~r~ 41 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMH-----REGAELAFTYQN 41 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHH-----HCCCEEEEEecc
Confidence 4568999999985 89999999999 799999888775
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=3.2e-05 Score=61.33 Aligned_cols=35 Identities=17% Similarity=0.027 Sum_probs=30.1
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 7 ~~~~~vLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
+.+|++||||| ++-||.+++++|+ +.|++|+...|
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~-----~~G~~v~~~~~ 40 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACK-----REGAELAFTYV 40 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHH-----HCCCeEEEEcc
Confidence 45689999996 5789999999999 79999988754
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=5.4e-05 Score=59.42 Aligned_cols=33 Identities=36% Similarity=0.229 Sum_probs=29.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++|||||++-||.+++++|. + |++|+.++|+.
T Consensus 1 ~~vlItGas~GIG~aia~~l~-----~-g~~Vil~~r~~ 33 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-----H-GEDVVLAARRP 33 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-----C-CCEEEEEeCCH
Confidence 579999999999999999998 4 89999999864
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00015 Score=56.39 Aligned_cols=36 Identities=25% Similarity=0.248 Sum_probs=30.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
..+.++||||+--||-.|+++|++ ..|.++++-.|+
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk----~~~i~~iiat~r 37 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLK----DKGIEVIIATAR 37 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhc----CCCcEEEEEecC
Confidence 345699999999999999999997 788887666655
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=97.93 E-value=1.2e-05 Score=58.92 Aligned_cols=34 Identities=29% Similarity=0.290 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
|++|||||++-||.+++++|++ ..++.|+.+.|+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~----~g~~~v~~~~r~ 34 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALAR----RGARVVILTSRS 34 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH----TTTEEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHh----cCceEEEEeeec
Confidence 5799999999999999999994 336788888888
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.83 E-value=2.9e-05 Score=65.85 Aligned_cols=71 Identities=14% Similarity=0.188 Sum_probs=52.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------CC-C-----------CCcc--
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------WF-P-----------TALV-- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~~-~-----------~~~v-- 58 (176)
++|+++||||+|+||++++++|. ++|++|++++|+.... ++ . .+.+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La-----~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELH-----QQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence 46899999999999999999999 7999999998864320 00 0 0111
Q ss_pred -----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 -----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 -----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
.++..+.+++|+.++.++++++...
T Consensus 252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~ 287 (406)
T PRK07424 252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTT 287 (406)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1123567899999999999887654
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=3.1e-05 Score=60.05 Aligned_cols=33 Identities=24% Similarity=0.239 Sum_probs=30.6
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++||||+|.||++++++|+ ++|++|+.++|+.
T Consensus 2 ~vlItGas~giG~~ia~~l~-----~~g~~v~~~~r~~ 34 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFR-----NDGHKVTLVGARR 34 (223)
T ss_pred eEEEEeCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 69999999999999999999 7899999998864
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=97.75 E-value=5.9e-05 Score=56.82 Aligned_cols=33 Identities=30% Similarity=0.238 Sum_probs=27.9
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++|||||+|-||..+++.|.+ .....|+.+.|+
T Consensus 2 tylitGG~gglg~~la~~La~----~~~~~~il~~r~ 34 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAE----RGARRLILLGRS 34 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHH----TT-SEEEEEESS
T ss_pred EEEEECCccHHHHHHHHHHHH----cCCCEEEEeccC
Confidence 689999999999999999994 334468999998
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=4.6e-05 Score=57.46 Aligned_cols=33 Identities=33% Similarity=0.283 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+++|||||||+|. ++++|. +.||+|++++|++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~-----~~G~~V~v~~R~~ 33 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLC-----EKGFHVSVIARRE 33 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHH-----HCcCEEEEEECCH
Confidence 47999999999886 999999 7999999999874
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00058 Score=56.23 Aligned_cols=87 Identities=15% Similarity=0.104 Sum_probs=61.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---C------C----C--C-----------Ccc--
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W------F----P--T-----------ALV-- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~------~----~--~-----------~~v-- 58 (176)
..++||.|+|++|.||+.++..|.. ....+++..+++..... . . . + +.|
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~---~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVi 82 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQ---NPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLI 82 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhc---CCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEE
Confidence 3456899999999999999999882 12446788888743211 0 0 0 0 011
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
..++...+..|+.+++++++++.++ +++++++++|-.+
T Consensus 83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-----~~~~iviv~SNPv 128 (321)
T PTZ00325 83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-----APKAIVGIVSNPV 128 (321)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-----CCCeEEEEecCcH
Confidence 1245678899999999999999998 5788998887654
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00026 Score=57.14 Aligned_cols=37 Identities=16% Similarity=-0.010 Sum_probs=31.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++.||||||++-+|+.++.+|+ ++|..+...+.+..
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa-----~rg~~~vl~Din~~ 73 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFA-----KRGAKLVLWDINKQ 73 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHH-----HhCCeEEEEecccc
Confidence 46789999999999999999999 68888877776654
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00055 Score=56.46 Aligned_cols=74 Identities=15% Similarity=0.077 Sum_probs=51.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCC--CCCcEEEEEecCCCC----C----CC-------------CC--------Ccc
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTP--GSPWKVYGAARRPPP----G----WF-------------PT--------ALV 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~--~~g~~V~~l~R~~~~----~----~~-------------~~--------~~v 58 (176)
.+|+||||+|+||++++..|+...-. ..+++|+.+++.+.. . .. .. +.|
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV 82 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA 82 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence 47999999999999999999831000 134689999985421 0 00 00 001
Q ss_pred ----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.++.|+...+.+.+.+.++
T Consensus 83 I~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 83 ILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred EEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 2245778899999999999999887
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=7.6e-05 Score=58.57 Aligned_cols=35 Identities=23% Similarity=0.074 Sum_probs=31.2
Q ss_pred CCCeEEEEcCC----------------hHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVT----------------GISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGat----------------GfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+++||||+|. ||+|++|+++|+ ..|++|+.+++.
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~-----~~Ga~V~li~g~ 52 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELI-----SKGAHVIYLHGY 52 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHH-----HCCCeEEEEeCC
Confidence 46899999885 999999999999 799999988764
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00019 Score=55.23 Aligned_cols=38 Identities=24% Similarity=0.167 Sum_probs=34.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+++.+||||||+.-||..|+++|+ +.|-+|+...|+..
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~-----elgN~VIi~gR~e~ 40 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFL-----ELGNTVIICGRNEE 40 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHH-----HhCCEEEEecCcHH
Confidence 346789999999999999999999 79999999999854
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.63 E-value=4.6e-05 Score=61.95 Aligned_cols=31 Identities=35% Similarity=0.478 Sum_probs=28.2
Q ss_pred EEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCC
Q 030483 13 LIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRP 48 (176)
Q Consensus 13 LVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~ 48 (176)
|||||++.||.+++++|+ ..| +.|+..+|+.
T Consensus 1 lITGas~GIG~aia~~l~-----~~G~~~V~~~~r~~ 32 (308)
T PLN00015 1 IITGASSGLGLATAKALA-----ETGKWHVVMACRDF 32 (308)
T ss_pred CEeCCCChHHHHHHHHHH-----HCCCCEEEEEeCCH
Confidence 699999999999999999 689 9999998864
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00011 Score=59.95 Aligned_cols=37 Identities=30% Similarity=0.300 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||++.||.+++++|+ ..|++|++++|+.
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la-----~~G~~Vv~~~r~~ 42 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELG-----AAGATVYVTGRST 42 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeccc
Confidence 346899999999999999999999 7999999999863
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0018 Score=52.70 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=29.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
..|.|||||+..-.|+.|+++|. +.|+.|++-.
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~-----~~Gf~V~Agc 60 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLD-----KKGFRVFAGC 60 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHH-----hcCCEEEEEe
Confidence 46789999998889999999999 7999999865
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00016 Score=54.14 Aligned_cols=37 Identities=22% Similarity=0.013 Sum_probs=33.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++++||||+|.||+++++.|. +.|++|+.++|+..
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~-----~~G~~V~l~~r~~~ 51 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLA-----KQGAKVIVTDIDQE 51 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 46889999999999999999999 78999999988753
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00056 Score=54.96 Aligned_cols=37 Identities=27% Similarity=0.194 Sum_probs=34.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+|.+|||||+.-||.++|.+|. ..|.+|+..+|+..
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la-----~~Ga~v~i~~r~~~ 43 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLA-----KAGAKVVITGRSEE 43 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 57899999999999999999999 79999999999754
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00036 Score=55.12 Aligned_cols=37 Identities=14% Similarity=0.026 Sum_probs=32.4
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|+++|||| ++-||.+++++|+ +.|++|+.++|+.
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la-----~~G~~v~l~~r~~ 43 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQ-----EQGAEVVLTGFGR 43 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHH-----HCCCEEEEecCcc
Confidence 44689999999 8899999999999 7999999988753
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00032 Score=58.07 Aligned_cols=38 Identities=21% Similarity=0.249 Sum_probs=30.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~ 48 (176)
..+++|+||||+|+||++++++|.. ..| .+++.+.|+.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~----~~gv~~lilv~R~~ 191 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDA----KTGVAELLLVARQQ 191 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHh----hCCCCEEEEEcCCH
Confidence 3568999999999999999999982 234 5788888864
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0032 Score=64.00 Aligned_cols=36 Identities=19% Similarity=0.078 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.++++|||||++-||..++++|.+ ..|++|+.++|+
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~----~~ga~viL~gRs 2031 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAK----QCQAHFILAGRS 2031 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH----hcCCEEEEEeCC
Confidence 357899999999999999999994 347899999998
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00034 Score=54.89 Aligned_cols=28 Identities=21% Similarity=0.187 Sum_probs=24.9
Q ss_pred cCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 16 GVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 16 GatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|||+|++|+++|+ .+||+|+++.|..
T Consensus 23 ~SSG~iG~aLA~~L~-----~~G~~V~li~r~~ 50 (229)
T PRK06732 23 HSTGQLGKIIAETFL-----AAGHEVTLVTTKT 50 (229)
T ss_pred ccchHHHHHHHHHHH-----hCCCEEEEEECcc
Confidence 459999999999999 7999999998754
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00035 Score=54.37 Aligned_cols=38 Identities=11% Similarity=0.065 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++++++|||||++-||++++++|. +.|++|+.++|+..
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la-----~~G~~V~~~~r~~~ 40 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFA-----RLGATLILCDQDQS 40 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHH-----HCCCEEEEEcCCHH
Confidence 356899999999999999999999 79999999988653
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00046 Score=53.82 Aligned_cols=37 Identities=35% Similarity=0.347 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++++|||||++-||.+++++|. ..|+.|+.+.|+.
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~-----~~G~~v~~~~~~~ 39 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALA-----REGARVVVAARRS 39 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCeEEEEcCCC
Confidence 356899999999999999999999 7999988887764
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0014 Score=53.43 Aligned_cols=36 Identities=31% Similarity=0.182 Sum_probs=32.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++||||+--||-.|+.++. ..|.+|+.+.|+..
T Consensus 33 ~~hi~itggS~glgl~la~e~~-----~~ga~Vti~ar~~~ 68 (331)
T KOG1210|consen 33 RRHILITGGSSGLGLALALECK-----REGADVTITARSGK 68 (331)
T ss_pred cceEEEecCcchhhHHHHHHHH-----HccCceEEEeccHH
Confidence 3689999999999999999999 79999999999754
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0038 Score=51.49 Aligned_cols=83 Identities=13% Similarity=0.046 Sum_probs=58.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---C------C-------CC----------Ccc----
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W------F-------PT----------ALV---- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~------~-------~~----------~~v---- 58 (176)
++||.|+|++|.||++++..|.. .....+++.+++..... . . .. +.|
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~---~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitA 94 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKM---NPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPA 94 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHh---CCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeC
Confidence 46899999999999999999982 02223788888755211 0 0 00 111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
..+..+.+..|...+.++++.+.++ .+..+++++|-
T Consensus 95 G~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-----~p~aivivvSN 136 (323)
T PLN00106 95 GVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-----CPNALVNIISN 136 (323)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-----CCCeEEEEeCC
Confidence 1256778899999999999999998 35677777664
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00053 Score=54.90 Aligned_cols=36 Identities=17% Similarity=0.032 Sum_probs=31.7
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|++|||||+ +-||.+++++|+ +.|++|+..+|+
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la-----~~G~~Vil~~r~ 40 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACF-----EQGAELAFTYLN 40 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHH-----HCCCEEEEEecC
Confidence 346899999997 689999999999 799999988876
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.001 Score=50.95 Aligned_cols=37 Identities=22% Similarity=0.122 Sum_probs=32.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+.+.++||||+.-||+++++.|. ..|+.|...+++..
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la-----~~Garv~v~dl~~~ 49 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLA-----KKGARVAVADLDSA 49 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHH-----hcCcEEEEeecchh
Confidence 45789999999999999999999 79999988877643
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.001 Score=55.37 Aligned_cols=37 Identities=27% Similarity=0.277 Sum_probs=30.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
||+++|+|+||||++|+.|++.|++ ....+++++.++
T Consensus 1 ~~~~~V~I~GatG~iG~~l~~~L~~----~p~~el~~~~~s 37 (349)
T PRK08664 1 MMKLKVGILGATGMVGQRFVQLLAN----HPWFEVTALAAS 37 (349)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHc----CCCceEEEEEcC
Confidence 5668999999999999999999994 344588887444
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.00099 Score=50.58 Aligned_cols=36 Identities=25% Similarity=0.197 Sum_probs=32.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..++++|+||+|.+|+.+++.|. ..|++|+.++|+.
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~-----~~g~~V~l~~R~~ 62 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLA-----REGARVVLVGRDL 62 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEcCCH
Confidence 46799999999999999999999 6889999998864
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0008 Score=52.92 Aligned_cols=33 Identities=24% Similarity=0.239 Sum_probs=29.5
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCC----CCcEEEEEecCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPG----SPWKVYGAARRP 48 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~----~g~~V~~l~R~~ 48 (176)
.+|||||++.||.+++++|. + .|++|+.++|+.
T Consensus 2 ~vlItGas~GIG~~~a~~la-----~~~~~~g~~V~~~~r~~ 38 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELA-----KCLKSPGSVLVLSARND 38 (256)
T ss_pred EEEEecCCCchHHHHHHHHH-----HhhccCCcEEEEEEcCH
Confidence 58999999999999999998 4 699999998863
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0073 Score=49.55 Aligned_cols=83 Identities=14% Similarity=0.061 Sum_probs=56.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------C-C---------CCC---------cc-----
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------W-F---------PTA---------LV----- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~---------~~~---------~v----- 58 (176)
||++|+||+|.||++++..|... ...++++..++|.+... . . ..+ .|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~--~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG 78 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQ--LPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAG 78 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC--CCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCC
Confidence 58999999999999999888520 03456788888754320 0 0 001 01
Q ss_pred -----cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 59 -----QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 59 -----~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
..+....+..|...+.++++++.++ .+++++.+.|-
T Consensus 79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-----~~~~ivivvsN 119 (312)
T PRK05086 79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKT-----CPKACIGIITN 119 (312)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEccC
Confidence 1134567889999999999999998 45677776653
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0011 Score=56.16 Aligned_cols=37 Identities=22% Similarity=0.071 Sum_probs=33.8
Q ss_pred CCCCeEEEEcC----------------ChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++||||| +|.+|.+++++|. ..|++|+.+++..
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~-----~~Ga~V~~v~~~~ 238 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAA-----RRGADVTLVSGPV 238 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHH-----HCCCEEEEeCCCc
Confidence 56789999999 9999999999999 7999999998764
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0011 Score=52.81 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=30.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|||+||||. |+.|+++|. +.||+|++..|...
T Consensus 1 m~ILvlGGT~e-gr~la~~L~-----~~g~~v~~s~~t~~ 34 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLI-----AQGIEILVTVTTSE 34 (256)
T ss_pred CeEEEEechHH-HHHHHHHHH-----hCCCeEEEEEccCC
Confidence 47999999999 999999999 68999999988764
|
This enzyme was found to be a monomer by gel filtration. |
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0063 Score=47.64 Aligned_cols=35 Identities=29% Similarity=0.236 Sum_probs=30.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++|+++|||+.|-||+.++++|+ .+|..+.++.-+
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll-----~kgik~~~i~~~ 38 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALL-----EKGIKVLVIDDS 38 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHH-----HcCchheeehhh
Confidence 47899999999999999999999 799887776544
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0019 Score=45.45 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=26.6
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
||.|.||||++|+.|++.|.+ ...+++..+..+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~----hp~~e~~~~~~~ 33 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAE----HPDFELVALVSS 33 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHH----TSTEEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHhc----CCCccEEEeeee
Confidence 689999999999999999995 566776555443
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0058 Score=47.71 Aligned_cols=71 Identities=15% Similarity=0.026 Sum_probs=49.1
Q ss_pred HHHHhhCCCCCCCCcEEEEEecCCCCCC-----C-C-----------------CCcc--------cCcHHHHHHHHHHHH
Q 030483 25 LAEALKNPTTPGSPWKVYGAARRPPPGW-----F-P-----------------TALV--------QESEEVNIFKNSTML 73 (176)
Q Consensus 25 l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----~-~-----------------~~~v--------~~~~~~~~~~N~~~t 73 (176)
++++|+ +.|++|++++|+..... . + .+.+ ..+.+..+++|+.++
T Consensus 1 ~a~~l~-----~~G~~Vv~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~ 75 (241)
T PRK12428 1 TARLLR-----FLGARVIGVDRREPGMTLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGL 75 (241)
T ss_pred ChHHHH-----hCCCEEEEEeCCcchhhhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHH
Confidence 467888 69999999999754310 0 0 0111 234667889999999
Q ss_pred HHHHHHHHhcCCCCCCccEEEEeccceeec
Q 030483 74 KNVLSVLVSSNSGRSRLRHVALLTGTKHYM 103 (176)
Q Consensus 74 ~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg 103 (176)
.++++++...+. +-.+|+++||...|+
T Consensus 76 ~~l~~~~~~~~~---~~g~Iv~isS~~~~~ 102 (241)
T PRK12428 76 RHLTEALLPRMA---PGGAIVNVASLAGAE 102 (241)
T ss_pred HHHHHHHHHhcc---CCcEEEEeCcHHhhc
Confidence 999999876521 125899999988775
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.01 Score=48.97 Aligned_cols=69 Identities=10% Similarity=-0.057 Sum_probs=49.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-------EEEEEecCCCC--C----------C-C--C-------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARRPPP--G----------W-F--P------------- 54 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-------~V~~l~R~~~~--~----------~-~--~------------- 54 (176)
+||.|+|++|+||++++..|+ ..+. ++..++..... . . . .
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~-----~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~ 77 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIA-----SGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFK 77 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHH-----hccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhC
Confidence 589999999999999999998 4554 68888874321 0 0 0 0
Q ss_pred -CCcc----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 55 -TALV----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 55 -~~~v----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
.+.| ..+..+.+..|+...+.+.+.+.++
T Consensus 78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~ 117 (322)
T cd01338 78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDV 117 (322)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 0011 2245668899999999999999998
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0043 Score=48.14 Aligned_cols=35 Identities=26% Similarity=0.194 Sum_probs=31.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|.|+||+|.+|+.|+..|. +.|++|+..+|++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~-----~~G~~V~v~~r~~~ 35 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLA-----KAGNKIIIGSRDLE 35 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHH-----hCCCEEEEEEcCHH
Confidence 479999999999999999999 68999999988753
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0045 Score=50.55 Aligned_cols=32 Identities=25% Similarity=0.226 Sum_probs=29.2
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHhhCCCCCCCCcEEEE
Q 030483 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYG 43 (176)
Q Consensus 7 ~~~~~vLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~ 43 (176)
+++|++||||| +.-||.+++++|. +.|++|+.
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la-----~~Ga~Vv~ 40 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALA-----AAGAEILV 40 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHH-----HCCCEEEE
Confidence 56899999999 6889999999999 79999877
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.006 Score=50.67 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=29.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+++|+|.||||++|+.+++.|.+ ..++++.++.++
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~----~p~~elv~v~~~ 36 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLN----HPEVEIVAVTSR 36 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHc----CCCceEEEEECc
Confidence 36899999999999999999994 457888776653
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.046 Score=44.78 Aligned_cols=80 Identities=18% Similarity=0.105 Sum_probs=54.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCC-CCCC-------------C-C---------------Cc
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPP-PGWF-------------P-T---------------AL 57 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~-~~~~-------------~-~---------------~~ 57 (176)
++|.|+|++|.+|.+++..|+ ..|. +|+.++|... +... . . +.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~-----~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~~l~~aDi 75 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLA-----KEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLSDVAGSDI 75 (309)
T ss_pred CEEEEECCCChHHHHHHHHHH-----hCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHHHhCCCCE
Confidence 589999999999999999999 5665 5999998431 1000 0 0 00
Q ss_pred c----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecc
Q 030483 58 V----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 98 (176)
Q Consensus 58 v----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss 98 (176)
+ ..+..+.+..|......+++.+.+. ++.. .++.+++
T Consensus 76 Viitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~---~~~~-~viv~~n 122 (309)
T cd05294 76 VIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEF---APDT-KILVVTN 122 (309)
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH---CCCe-EEEEeCC
Confidence 0 1133567788999999999998887 4442 3555553
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0072 Score=49.24 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=29.9
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 7 ~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
.++|++|||||+ .-||++++++|. ++|++|+..+|
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la-----~~Ga~Vvv~~~ 42 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALA-----EAGATILVGTW 42 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHH-----HCCCEEEEEec
Confidence 467899999994 679999999999 79999887653
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0068 Score=43.93 Aligned_cols=71 Identities=20% Similarity=0.169 Sum_probs=51.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------CCC---------------CCcc----
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------WFP---------------TALV---- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~~~---------------~~~v---- 58 (176)
+||.|+|++|.+|++++..|+.. .-+.+++.+++..... ... .+.+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~---~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvita 77 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQ---GLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITA 77 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHT---TTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETT
T ss_pred CEEEEECCCChHHHHHHHHHHhC---CCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEec
Confidence 48999999999999999999831 2334788888874321 000 0111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|....+.+.+.+.+.
T Consensus 78 g~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~ 108 (141)
T PF00056_consen 78 GVPRKPGMSRLDLLEANAKIVKEIAKKIAKY 108 (141)
T ss_dssp STSSSTTSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccHHHHHHHhHhHHHHHHHHHHHh
Confidence 2345678899999999999999998
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.0067 Score=50.17 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=27.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc---EEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW---KVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~---~V~~l~R~~ 48 (176)
++|+|.||||++|+.|++.|. +.+| +++.+.+..
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~-----~~~hp~~~l~~l~s~~ 38 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILE-----ERNFPVDKLRLLASAR 38 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHH-----hCCCCcceEEEEEccc
Confidence 589999999999999999998 5555 457776653
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0077 Score=50.77 Aligned_cols=37 Identities=16% Similarity=0.326 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++|.|.||||++|..|++.|.+ ....+|+.++++.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~----hP~~el~~l~s~~ 73 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLAN----HPDFEITVMTADR 73 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHh----CCCCeEEEEEChh
Confidence 567999999999999999999994 3467899988753
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.0099 Score=49.95 Aligned_cols=37 Identities=22% Similarity=0.135 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..++|.|.||.|.+|+.++..|. ..|++|++++|++.
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~-----~~G~~V~~~d~~~~ 133 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLT-----LSGYQVRILEQDDW 133 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHH-----HCCCeEEEeCCCcc
Confidence 34789999999999999999999 78999999998653
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.087 Score=43.48 Aligned_cols=73 Identities=16% Similarity=0.049 Sum_probs=49.0
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCC--CCCcEEEEEecCC--CCCC-----------C--C--------------CCcc-
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTP--GSPWKVYGAARRP--PPGW-----------F--P--------------TALV- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~--~~g~~V~~l~R~~--~~~~-----------~--~--------------~~~v- 58 (176)
||.|+||+|.||++++..|....-. ...++++.+++.. .... . . .+.|
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVV 81 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAI 81 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEEE
Confidence 7999999999999999999830000 0233688888865 2110 0 0 0111
Q ss_pred ---------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ---------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ---------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|+...+.+.+.+.+.
T Consensus 82 itAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 82 LVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred EeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 2245678899999999999999887
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.012 Score=49.69 Aligned_cols=34 Identities=29% Similarity=0.240 Sum_probs=29.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~ 49 (176)
++|||.|+ |+||+.+++.|. .++ .+|++.+|+..
T Consensus 2 ~~ilviGa-G~Vg~~va~~la-----~~~d~~V~iAdRs~~ 36 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLA-----QNGDGEVTIADRSKE 36 (389)
T ss_pred CcEEEECC-chhHHHHHHHHH-----hCCCceEEEEeCCHH
Confidence 68999998 999999999999 455 89999999854
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.13 Score=42.42 Aligned_cols=73 Identities=15% Similarity=0.076 Sum_probs=48.6
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCC--CCcEEEEEecCCCC--CC---------C-----------C-------CCcc-
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPG--SPWKVYGAARRPPP--GW---------F-----------P-------TALV- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~--~~---------~-----------~-------~~~v- 58 (176)
+|.|+|++|.+|++++..|....--. +.++++.+++.+.. .. . . .+.|
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV 80 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI 80 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence 58999999999999999998200000 23368888874332 00 0 0 0011
Q ss_pred ---------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ---------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ---------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|+...+.+.+.+.++
T Consensus 81 itAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 81 LVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL 114 (324)
T ss_pred EcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 2245678899999999999999987
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.021 Score=47.97 Aligned_cols=37 Identities=24% Similarity=0.207 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|+|||||++..+|-.+++.|. +.|++|++++..+.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~-----~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFH-----NAGHTVILADSLKY 39 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCch
Confidence 46899999999999999999999 68999999987653
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.02 Score=48.49 Aligned_cols=38 Identities=26% Similarity=0.101 Sum_probs=33.0
Q ss_pred CCCCeEEEEcC----------------ChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+.++++||||| ||.+|.+++++|. ..|++|+.+.+...
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~-----~~Ga~V~~~~g~~~ 236 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAY-----KRGADVTLITGPVS 236 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHH-----HCCCEEEEeCCCCc
Confidence 56789999999 5789999999999 79999999887543
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.019 Score=47.68 Aligned_cols=21 Identities=29% Similarity=0.453 Sum_probs=20.2
Q ss_pred CeEEEEcCChHHHHHHHHHhh
Q 030483 10 SVALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~ 30 (176)
++|.|+||||++|..|++.|.
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~ 25 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILE 25 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHh
Confidence 589999999999999999999
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.027 Score=45.68 Aligned_cols=36 Identities=11% Similarity=-0.037 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~ 48 (176)
..+++++|+|| |-+|++++.+|. ..|++ |+.++|+.
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La-----~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCA-----LDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHH-----HCCCCEEEEEeCCc
Confidence 45688999999 689999999999 68886 99999975
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.019 Score=43.44 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=34.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++.|+|||+.--||+.++.+|. ..|.+|+++.|.+.+
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La-----~aGA~ViAvaR~~a~ 43 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLA-----KAGAQVIAVARNEAN 43 (245)
T ss_pred cceEEEeecccccccHHHHHHHH-----hcCCEEEEEecCHHH
Confidence 46789999999999999999999 799999999998654
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.049 Score=42.71 Aligned_cols=24 Identities=21% Similarity=0.264 Sum_probs=20.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhh
Q 030483 7 NPKSVALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~ 30 (176)
.+.+.+||||+|--||..++..++
T Consensus 4 ~~r~villTGaSrgiG~~~v~~i~ 27 (253)
T KOG1204|consen 4 NMRKVILLTGASRGIGTGSVATIL 27 (253)
T ss_pred ccceEEEEecCCCCccHHHHHHHH
Confidence 456789999999999988888887
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.023 Score=48.73 Aligned_cols=35 Identities=34% Similarity=0.317 Sum_probs=31.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|+|+||+|.+|+.+++.|. ..|++|++++|++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~-----~~G~~V~v~~r~~~ 35 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLK-----EKGFEVIVTGRDPK 35 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHH-----HCCCEEEEEECChH
Confidence 479999999999999999999 68999999998754
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.22 Score=41.11 Aligned_cols=69 Identities=14% Similarity=0.012 Sum_probs=49.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-------EEEEEecCCCC--C----------C-C--C-------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARRPPP--G----------W-F--P------------- 54 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-------~V~~l~R~~~~--~----------~-~--~------------- 54 (176)
.||.|+|++|++|++++..|+ ..+. ++..++..... . . . .
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~-----~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~ 78 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIA-----SGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFK 78 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHH-----hCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhC
Confidence 489999999999999999998 3553 68888874311 0 0 0 0
Q ss_pred -CCcc----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 55 -TALV----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 55 -~~~v----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
.+.| ..+..+.+..|+...+.+.+.+.+.
T Consensus 79 daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~ 118 (323)
T TIGR01759 79 DVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKV 118 (323)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 0111 2245678899999999999999998
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.029 Score=47.92 Aligned_cols=36 Identities=31% Similarity=0.267 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|+++|+|+++ +|..+++.|+ ..|++|++.++..
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~-----~~G~~V~~~d~~~ 38 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLK-----KLGAKVILTDEKE 38 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHH-----HCCCEEEEEeCCc
Confidence 4568999999988 9999999999 7999999999864
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.023 Score=46.32 Aligned_cols=33 Identities=24% Similarity=0.266 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++|.|+| .|++|+.++..|+ ..|++|++++|++
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la-----~~G~~V~v~d~~~ 35 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFA-----RAGHEVRLWDADP 35 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHH-----HCCCeeEEEeCCH
Confidence 4799999 9999999999999 6899999999875
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.031 Score=46.34 Aligned_cols=32 Identities=16% Similarity=0.314 Sum_probs=26.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
++|.|+|++|++|++|++.|.+ ....++..+.
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~----~~~~~l~~v~ 32 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAK----HPYFELAKVV 32 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHh----CCCceEEEEE
Confidence 3799999999999999999983 3446887774
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.3 Score=40.37 Aligned_cols=69 Identities=13% Similarity=0.040 Sum_probs=48.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-------EEEEEecCCCC----C--------C-C--CC------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARRPPP----G--------W-F--PT------------ 55 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-------~V~~l~R~~~~----~--------~-~--~~------------ 55 (176)
+||.|+|++|.+|++++..|. ..+. ++..+++.+.. . . . ..
T Consensus 5 ~KV~IiGaaG~VG~~~a~~l~-----~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~ 79 (326)
T PRK05442 5 VRVAVTGAAGQIGYSLLFRIA-----SGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFK 79 (326)
T ss_pred cEEEEECCCcHHHHHHHHHHH-----hhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhC
Confidence 489999999999999999888 3333 67778774321 0 0 0 00
Q ss_pred --Ccc----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 56 --ALV----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 56 --~~v----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
+.| ..+..+.+..|+...+.+.+.+.++
T Consensus 80 daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~ 119 (326)
T PRK05442 80 DADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEV 119 (326)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 011 2245678899999999999999986
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.033 Score=45.37 Aligned_cols=37 Identities=24% Similarity=0.210 Sum_probs=33.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
++-+.|||||.-||.+.+++|. .+|+.|+.++|...+
T Consensus 49 g~WAVVTGaTDGIGKayA~eLA-----krG~nvvLIsRt~~K 85 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELA-----KRGFNVVLISRTQEK 85 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHH-----HcCCEEEEEeCCHHH
Confidence 3678999999999999999999 799999999998654
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.18 Score=41.17 Aligned_cols=68 Identities=22% Similarity=0.214 Sum_probs=50.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCCC-------------C-C-------------CCcc--
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW-------------F-P-------------TALV-- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~~-------------~-~-------------~~~v-- 58 (176)
++|.|.|+ |.+|+.++..|+ ..| ++|..++|...... . . .+.+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~-----~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIi 74 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLV-----NQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVI 74 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEE
Confidence 47899996 899999999999 577 68999998654310 0 0 0111
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|....+.+.+.+.+.
T Consensus 75 tag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~ 107 (306)
T cd05291 75 TAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS 107 (306)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 2245677889999999999999998
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.064 Score=44.06 Aligned_cols=37 Identities=24% Similarity=0.320 Sum_probs=29.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+.+|.|.||||++|..|++.|.+ ....++..+..+.
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~----hp~~~l~~~~s~~ 37 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAG----RSDIELLSIPEAK 37 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhc----CCCeEEEEEecCC
Confidence 567899999999999999999984 3445677766543
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.048 Score=45.40 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=26.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA 44 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l 44 (176)
++|.|.||||++|..+++.|.+ ..+++++.+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~----hP~~el~~l 31 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLN----HPEVEITYL 31 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHc----CCCceEEEE
Confidence 4799999999999999999994 456788754
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.064 Score=41.11 Aligned_cols=36 Identities=25% Similarity=0.187 Sum_probs=31.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|+++|+|. |-+|+++++.|. +.|++|++.+++.
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~-----~~G~~Vvv~D~~~ 61 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLL-----EEGAKLIVADINE 61 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEcCCH
Confidence 45789999997 689999999999 7999999887764
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.056 Score=46.11 Aligned_cols=35 Identities=23% Similarity=0.305 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++++|||++| +|.+.++.|+ +.|++|.+.+++.
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~-----~~G~~V~~~d~~~ 38 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLH-----KLGANVTVNDGKP 38 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHH-----HCCCEEEEEcCCC
Confidence 467899999998 9999999999 7999999998754
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.045 Score=43.72 Aligned_cols=25 Identities=32% Similarity=0.396 Sum_probs=22.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKN 31 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~ 31 (176)
||.|.+||||++.-||-+||.+|++
T Consensus 1 ~~RKvalITGanSglGl~i~~RLl~ 25 (341)
T KOG1478|consen 1 MMRKVALITGANSGLGLAICKRLLA 25 (341)
T ss_pred CCceEEEEecCCCcccHHHHHHHHh
Confidence 4667899999999999999999995
|
|
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.055 Score=45.51 Aligned_cols=36 Identities=28% Similarity=0.325 Sum_probs=31.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++|+|.|.+|.||+.+++.|.+ ..+++|++++|.+
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~----~~~~~V~g~D~~d 39 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRT----RMQLEVIGHDPAD 39 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHh----cCCCEEEEEcCCc
Confidence 56899999999999999999994 3488999999864
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.044 Score=45.61 Aligned_cols=28 Identities=25% Similarity=0.398 Sum_probs=24.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK 40 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~ 40 (176)
++.+|.|.||||++|..|++.|. .++|.
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~-----~~~hP 33 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLT-----DRDFP 33 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHH-----hCCCC
Confidence 46789999999999999999998 55663
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.046 Score=46.59 Aligned_cols=34 Identities=29% Similarity=0.361 Sum_probs=30.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+++|+|+ |.+|+++++.|. +.|++|+.+++++.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~-----~~g~~v~vid~~~~ 34 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLS-----GENNDVTVIDTDEE 34 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCcEEEEECCHH
Confidence 47999997 999999999999 68999999988643
|
|
| >PRK06249 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.076 Score=43.34 Aligned_cols=36 Identities=25% Similarity=0.165 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++.++|+|.| .|-||+.++..|. +.|++|+.+.|+.
T Consensus 3 ~~~m~I~IiG-~GaiG~~lA~~L~-----~~g~~V~~~~r~~ 38 (313)
T PRK06249 3 SETPRIGIIG-TGAIGGFYGAMLA-----RAGFDVHFLLRSD 38 (313)
T ss_pred CcCcEEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEEeCC
Confidence 4557899996 6889999999999 6899999999975
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.078 Score=37.41 Aligned_cols=35 Identities=29% Similarity=0.523 Sum_probs=29.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEE-EecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~ 48 (176)
++|.|.|++|-.|+.+++.+.+ ..++++.+ ++|++
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~----~~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILE----SPGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH----STTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHh----cCCcEEEEEEecCC
Confidence 4799999999999999999995 58899665 45555
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.041 Score=45.70 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=23.1
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEE
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVY 42 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~ 42 (176)
+|+|.||||++|..|++.|. +.+|.+.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~-----~~~hp~~ 27 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILE-----ERNFPID 27 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHH-----hCCCChh
Confidence 58999999999999999998 5677643
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.066 Score=44.01 Aligned_cols=34 Identities=21% Similarity=0.181 Sum_probs=29.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++|.|.| .|.+|+.++..|. ..|++|+.++|++
T Consensus 2 ~mkI~IiG-~G~mG~~~A~~L~-----~~G~~V~~~~r~~ 35 (341)
T PRK08229 2 MARICVLG-AGSIGCYLGGRLA-----AAGADVTLIGRAR 35 (341)
T ss_pred CceEEEEC-CCHHHHHHHHHHH-----hcCCcEEEEecHH
Confidence 46799997 7899999999999 6899999999864
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.069 Score=41.31 Aligned_cols=34 Identities=29% Similarity=0.223 Sum_probs=27.9
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
+...||+|-||+.|+++|. ..||+|+.-+|+.+.
T Consensus 3 ~~~i~GtGniG~alA~~~a-----~ag~eV~igs~r~~~ 36 (211)
T COG2085 3 IIAIIGTGNIGSALALRLA-----KAGHEVIIGSSRGPK 36 (211)
T ss_pred EEEEeccChHHHHHHHHHH-----hCCCeEEEecCCChh
Confidence 4455779999999999999 799999888776554
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.087 Score=38.01 Aligned_cols=35 Identities=26% Similarity=0.183 Sum_probs=29.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~ 48 (176)
..++++|+|+ |.+|+.+++.|. ..| ++|+.++|+.
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~-----~~g~~~v~v~~r~~ 53 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALA-----ELGAAKIVIVNRTL 53 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-----HCCCCEEEEEcCCH
Confidence 3578999997 899999999999 454 7898888864
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.095 Score=42.71 Aligned_cols=37 Identities=24% Similarity=0.240 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+++|.|.| +|-+|+++++.|. ..|++|+.++|+...
T Consensus 3 ~~m~I~iiG-~G~~G~~lA~~l~-----~~G~~V~~~~r~~~~ 39 (308)
T PRK14619 3 QPKTIAILG-AGAWGSTLAGLAS-----ANGHRVRVWSRRSGL 39 (308)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHH-----HCCCEEEEEeCCCCC
Confidence 456899996 7999999999999 799999999997643
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.078 Score=42.67 Aligned_cols=36 Identities=22% Similarity=0.314 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||+||+|.+|..+++.+. ..|++|++++|++
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~-----~~g~~v~~~~~~~ 197 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAK-----ALGARVIAVTRSP 197 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCeEEEEeCCH
Confidence 45789999999999999999999 6899999988764
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.087 Score=42.38 Aligned_cols=35 Identities=17% Similarity=0.091 Sum_probs=30.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~ 48 (176)
.++++||+|+ |.+|++++.+|. ..| .+|+.++|+.
T Consensus 122 ~~k~vlVlGa-Gg~a~ai~~aL~-----~~g~~~V~v~~R~~ 157 (278)
T PRK00258 122 KGKRILILGA-GGAARAVILPLL-----DLGVAEITIVNRTV 157 (278)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHH-----HcCCCEEEEEeCCH
Confidence 4578999997 889999999999 688 6899999864
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.084 Score=37.77 Aligned_cols=36 Identities=28% Similarity=0.271 Sum_probs=30.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~ 48 (176)
..++++||.|+ |-.|+.++.+|. ..|.+ |+.+.|+.
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~-----~~g~~~i~i~nRt~ 46 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALA-----ALGAKEITIVNRTP 46 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHH-----HTTSSEEEEEESSH
T ss_pred cCCCEEEEECC-HHHHHHHHHHHH-----HcCCCEEEEEECCH
Confidence 35789999997 669999999999 67876 98888864
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.062 Score=41.23 Aligned_cols=28 Identities=32% Similarity=0.466 Sum_probs=25.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEE
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVY 42 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~ 42 (176)
+++.|.||+|-.|+.+++.|. +.|+.|+
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~-----~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILD-----DNGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHH-----hCCCEEE
Confidence 479999999999999999999 7899986
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.39 Score=39.46 Aligned_cols=69 Identities=22% Similarity=0.254 Sum_probs=49.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCC------------C-CC-------------CCcc--
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPG------------W-FP-------------TALV-- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~------------~-~~-------------~~~v-- 58 (176)
++||.|+|+ |.+|++++..|+ ..|. ++..+++..... . .. .+.+
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~-----~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIi 79 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALV-----NQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVI 79 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEE
Confidence 358999998 999999999998 5666 688888754321 0 00 0111
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+....+..|....+.+++.+.+.
T Consensus 80 tag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~ 112 (315)
T PRK00066 80 TAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS 112 (315)
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1244667889999999999999887
|
|
| >PLN02256 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.097 Score=42.82 Aligned_cols=36 Identities=25% Similarity=0.220 Sum_probs=31.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+++|.|.| .|.+|+.+++.|. ..|++|++++|+.
T Consensus 34 ~~~~kI~IIG-~G~mG~slA~~L~-----~~G~~V~~~d~~~ 69 (304)
T PLN02256 34 SRKLKIGIVG-FGNFGQFLAKTFV-----KQGHTVLATSRSD 69 (304)
T ss_pred CCCCEEEEEe-eCHHHHHHHHHHH-----hCCCEEEEEECcc
Confidence 3467899999 7999999999999 6789999999875
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.12 Score=38.57 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++||.|+++.+|..+++.|. ..|.+|+.+.|..
T Consensus 43 ~gk~vlViG~G~~~G~~~a~~L~-----~~g~~V~v~~r~~ 78 (168)
T cd01080 43 AGKKVVVVGRSNIVGKPLAALLL-----NRNATVTVCHSKT 78 (168)
T ss_pred CCCEEEEECCcHHHHHHHHHHHh-----hCCCEEEEEECCc
Confidence 56899999998889999999999 6888898888864
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.13 Score=33.04 Aligned_cols=35 Identities=31% Similarity=0.284 Sum_probs=29.6
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG 51 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~ 51 (176)
+++|.| +|++|..++..|. ..|.+|+.+.|++...
T Consensus 1 ~vvViG-gG~ig~E~A~~l~-----~~g~~vtli~~~~~~~ 35 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALA-----ELGKEVTLIERSDRLL 35 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHH-----HTTSEEEEEESSSSSS
T ss_pred CEEEEC-cCHHHHHHHHHHH-----HhCcEEEEEeccchhh
Confidence 466766 6999999999999 7999999999987543
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.11 Score=45.80 Aligned_cols=36 Identities=28% Similarity=0.229 Sum_probs=30.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++||+|+ |-+|++++.+|. ..|++|+.++|+.
T Consensus 377 ~~~k~vlIlGa-GGagrAia~~L~-----~~G~~V~i~nR~~ 412 (529)
T PLN02520 377 LAGKLFVVIGA-GGAGKALAYGAK-----EKGARVVIANRTY 412 (529)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHH-----HCCCEEEEEcCCH
Confidence 45689999998 679999999999 6888999888853
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.34 Score=41.74 Aligned_cols=69 Identities=14% Similarity=0.077 Sum_probs=49.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCC-------Cc--EEEEEecCCCCCC--------------CC------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGS-------PW--KVYGAARRPPPGW--------------FP------------ 54 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~-------g~--~V~~l~R~~~~~~--------------~~------------ 54 (176)
-+|.|+|++|.+|.+++..|+ .. +. ++..+++...... ..
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~-----~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~k 175 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLA-----SGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYEVFQ 175 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHH-----hcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHHHhC
Confidence 479999999999999999998 34 44 5777776543210 00
Q ss_pred -CCcc----------cCcHHHHHHHHHHHHHHHHHHHHh-c
Q 030483 55 -TALV----------QESEEVNIFKNSTMLKNVLSVLVS-S 83 (176)
Q Consensus 55 -~~~v----------~~~~~~~~~~N~~~t~~ll~a~~~-~ 83 (176)
.+++ ..+..+.++.|+...+.+.+.+.+ +
T Consensus 176 daDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a 216 (444)
T PLN00112 176 DAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVA 216 (444)
T ss_pred cCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0111 224567889999999999999998 5
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.11 Score=39.50 Aligned_cols=36 Identities=22% Similarity=0.092 Sum_probs=27.6
Q ss_pred CCCeEEEEcC----------------ChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++||||+| ||-.|.+|++++. ..|++|+.+....
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~-----~~Ga~V~li~g~~ 53 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAA-----RRGAEVTLIHGPS 53 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHH-----HTT-EEEEEE-TT
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHH-----HCCCEEEEEecCc
Confidence 3577888876 8999999999999 7999999988763
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.11 Score=43.87 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=29.1
Q ss_pred CCCeEEEEcCChHHHHH--HHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLS--LAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~--l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+|++||||+++-+|.+ ++++| . .|++|+++++.
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~-----~GA~Vi~v~~~ 75 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-G-----AGADTLGVFFE 75 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-H-----cCCeEEEEecC
Confidence 35899999999999999 88888 4 88998888853
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.16 Score=40.42 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=27.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
++|.|+|++|.+|+.+++.+.+ ..+.++.++..
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~----~~~~elvav~d 34 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEA----AEDLELVAAVD 34 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEe
Confidence 5899999999999999998884 46788777543
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.12 Score=43.28 Aligned_cols=34 Identities=32% Similarity=0.555 Sum_probs=26.4
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~ 50 (176)
|+|.|| |++|+.+++.|++ ...+ +|+..+|+...
T Consensus 1 IlvlG~-G~vG~~~~~~L~~----~~~~~~v~va~r~~~~ 35 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLAR----RGPFEEVTVADRNPEK 35 (386)
T ss_dssp EEEE---SHHHHHHHHHHHC----TTCE-EEEEEESSHHH
T ss_pred CEEEcC-cHHHHHHHHHHhc----CCCCCcEEEEECCHHH
Confidence 789999 9999999999995 4446 89999987543
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.09 Score=39.61 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=27.7
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+|.|.|+ |.+|+.++..++ ..|++|+.+++++.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a-----~~G~~V~l~d~~~~ 33 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFA-----RAGYEVTLYDRSPE 33 (180)
T ss_dssp EEEEES--SHHHHHHHHHHH-----HTTSEEEEE-SSHH
T ss_pred CEEEEcC-CHHHHHHHHHHH-----hCCCcEEEEECChH
Confidence 5789997 999999999999 68999999998754
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.12 Score=44.06 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=30.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.| .|++|..++..|. ..|++|+++++++.
T Consensus 4 ~kI~VIG-lG~~G~~~A~~La-----~~G~~V~~~D~~~~ 37 (415)
T PRK11064 4 ETISVIG-LGYIGLPTAAAFA-----SRQKQVIGVDINQH 37 (415)
T ss_pred cEEEEEC-cchhhHHHHHHHH-----hCCCEEEEEeCCHH
Confidence 6899997 7999999999999 68999999998754
|
|
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.09 Score=39.84 Aligned_cols=34 Identities=32% Similarity=0.388 Sum_probs=26.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|.|.| .|++|.-++..|. +.||+|++++.++.
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA-----~~G~~V~g~D~~~~ 34 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALA-----EKGHQVIGVDIDEE 34 (185)
T ss_dssp -EEEEE---STTHHHHHHHHH-----HTTSEEEEE-S-HH
T ss_pred CEEEEEC-CCcchHHHHHHHH-----hCCCEEEEEeCChH
Confidence 5788885 8999999999999 79999999987653
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=93.22 E-value=0.14 Score=41.10 Aligned_cols=33 Identities=30% Similarity=0.270 Sum_probs=29.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|+|.|+ |-+|+.++..|. ..|++|+.++|++
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~-----~~g~~V~~~~r~~ 33 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALA-----QAGHDVTLVARRG 33 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCh
Confidence 47999996 899999999999 6899999999854
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.15 Score=41.61 Aligned_cols=37 Identities=16% Similarity=0.160 Sum_probs=31.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+.++||+||+|.+|..+++.+. ..|.+|+++++++.
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk-----~~G~~Vi~~~~~~~ 187 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAK-----LKGCYVVGSAGSDE 187 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 45799999999999999998887 68999998887643
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.17 Score=40.45 Aligned_cols=35 Identities=31% Similarity=0.322 Sum_probs=30.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..++++|+|+ |-+|++++..|. ..|++|+.++|+.
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~-----~~g~~v~v~~R~~ 150 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLL-----KADCNVIIANRTV 150 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 3578999998 789999999999 6788999888864
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.21 Score=40.45 Aligned_cols=36 Identities=22% Similarity=0.195 Sum_probs=31.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
..+++++|.|++|.+|+.++..|+ ..|..|+.+.|+
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~-----~~gatVtv~~~~ 192 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLL-----NANATVTICHSR 192 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHH-----hCCCEEEEEeCC
Confidence 467899999999999999999999 678888888774
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.19 Score=35.01 Aligned_cols=30 Identities=27% Similarity=0.388 Sum_probs=26.2
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA 44 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l 44 (176)
++.|+|++|.+|..+++.|.. ..++++.++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~----~~~~~l~av 30 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAE----HPDFEVVAL 30 (122)
T ss_pred CEEEECCCChHHHHHHHHHhc----CCCceEEEE
Confidence 478999999999999999994 468898888
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.26 Score=36.87 Aligned_cols=37 Identities=35% Similarity=0.445 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++.|.| .|-||+++++.|. .-|.+|++++|...+
T Consensus 35 ~g~tvgIiG-~G~IG~~vA~~l~-----~fG~~V~~~d~~~~~ 71 (178)
T PF02826_consen 35 RGKTVGIIG-YGRIGRAVARRLK-----AFGMRVIGYDRSPKP 71 (178)
T ss_dssp TTSEEEEES-TSHHHHHHHHHHH-----HTT-EEEEEESSCHH
T ss_pred CCCEEEEEE-EcCCcCeEeeeee-----cCCceeEEecccCCh
Confidence 578999998 6899999999999 799999999998653
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.97 E-value=0.14 Score=41.33 Aligned_cols=34 Identities=15% Similarity=0.245 Sum_probs=30.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.|+ |.+|+.++..|+ ..|++|+.+++++.
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la-----~~G~~V~~~d~~~~ 35 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFA-----VSGFQTTLVDIKQE 35 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHH-----hCCCcEEEEeCCHH
Confidence 57899996 999999999999 68999999998753
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=92.97 E-value=0.2 Score=38.46 Aligned_cols=35 Identities=14% Similarity=-0.001 Sum_probs=30.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++||.|| |-+|...++.|+ +.|.+|+.+++..
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll-----~~ga~V~VIs~~~ 43 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLL-----KYGAHIVVISPEL 43 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HCCCeEEEEcCCC
Confidence 4689999997 889999999999 6889999988754
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.14 Score=41.20 Aligned_cols=33 Identities=36% Similarity=0.505 Sum_probs=29.2
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+|.|.| .|.+|+.++..|. ..|++|++++|++.
T Consensus 2 ~I~IIG-~G~mG~sla~~L~-----~~g~~V~~~d~~~~ 34 (279)
T PRK07417 2 KIGIVG-LGLIGGSLGLDLR-----SLGHTVYGVSRRES 34 (279)
T ss_pred eEEEEe-ecHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 688998 7999999999999 68999999998753
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.22 Score=40.65 Aligned_cols=36 Identities=25% Similarity=0.228 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe-cC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA-RR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~-R~ 47 (176)
..+++|+|.|.+|.+|..++..|+ .+|+.|+.+. |.
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~-----~~g~tVtv~~~rT 192 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLL-----AANATVTIAHSRT 192 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHH-----hCCCEEEEECCCC
Confidence 468999999999999999999999 6999999984 54
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=92.75 E-value=0.99 Score=37.73 Aligned_cols=68 Identities=16% Similarity=0.237 Sum_probs=47.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCC-------------CCC--------------CCcc--
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPG-------------WFP--------------TALV-- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~-------------~~~--------------~~~v-- 58 (176)
+||.|+|+ |.||++++..|+ ..+. ++..++...... ... .+.|
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~-----~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~~~~daDiVVi 111 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTIL-----TQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYAVTAGSDLCIV 111 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHHHhCCCCEEEE
Confidence 59999996 999999999998 3443 688888754321 000 0111
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|+...+.+.+.+.+.
T Consensus 112 tAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~ 144 (350)
T PLN02602 112 TAGARQIPGESRLNLLQRNVALFRKIIPELAKY 144 (350)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1244567889999999999999887
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.73 E-value=0.17 Score=42.04 Aligned_cols=23 Identities=30% Similarity=0.352 Sum_probs=21.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhh
Q 030483 8 PKSVALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~ 30 (176)
.+++|.|.||||++|..|++.|.
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~ 25 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLA 25 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHh
Confidence 46799999999999999999998
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.70 E-value=0.17 Score=39.48 Aligned_cols=35 Identities=29% Similarity=0.285 Sum_probs=29.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
|+++|.| .|-+|+.|++.|. +.|++|+++++.+..
T Consensus 1 m~iiIiG-~G~vG~~va~~L~-----~~g~~Vv~Id~d~~~ 35 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELS-----EEGHNVVLIDRDEER 35 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHH-----hCCCceEEEEcCHHH
Confidence 4677777 6889999999999 799999999987643
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.21 Score=40.67 Aligned_cols=36 Identities=31% Similarity=0.412 Sum_probs=29.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~ 49 (176)
+.++|.|.| .|-+|..++..|. ..|+ +|++++|++.
T Consensus 5 ~~~~I~IIG-~G~mG~sla~~l~-----~~g~~~~V~~~dr~~~ 42 (307)
T PRK07502 5 LFDRVALIG-IGLIGSSLARAIR-----RLGLAGEIVGADRSAE 42 (307)
T ss_pred CCcEEEEEe-eCHHHHHHHHHHH-----hcCCCcEEEEEECCHH
Confidence 346899998 8999999999999 5775 7999998753
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=92.56 E-value=1.7 Score=35.74 Aligned_cols=70 Identities=19% Similarity=0.117 Sum_probs=48.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC------------C-------CC---------Ccc---
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------------F-------PT---------ALV--- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------------~-------~~---------~~v--- 58 (176)
+||.|+|+ |+||+.++..|+. ..-+-++..++....... . .+ +.+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~---~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDiVvit 76 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLL---QGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADIVVIT 76 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhc---ccccceEEEEEcccccccchhcchhhcchhccCceEEecCCChhhhcCCCEEEEe
Confidence 47999999 9999999999983 122336888887632210 0 00 011
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
-.+...++..|......+.+.+.+.
T Consensus 77 AG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~ 108 (313)
T COG0039 77 AGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY 108 (313)
T ss_pred CCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh
Confidence 1145678899999999999999887
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=92.53 E-value=0.21 Score=40.47 Aligned_cols=36 Identities=22% Similarity=0.440 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++++|+|. |.+|+.+++.|. ..|++|+..+|+..
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~-----~~G~~V~v~~R~~~ 185 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFS-----ALGARVFVGARSSA 185 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 4689999997 779999999999 68999999998753
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK12409 D-amino acid dehydrogenase small subunit; Provisional | Back alignment and domain information |
|---|
Probab=92.32 E-value=0.24 Score=41.63 Aligned_cols=33 Identities=33% Similarity=0.422 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|+|.| +|++|..++.+|. +.|++|+.+.|..
T Consensus 2 ~~vvIIG-aG~~G~~~A~~La-----~~g~~V~vle~~~ 34 (410)
T PRK12409 2 SHIAVIG-AGITGVTTAYALA-----QRGYQVTVFDRHR 34 (410)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEeCCC
Confidence 4799999 5999999999999 6899999999976
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=92.26 E-value=0.27 Score=39.85 Aligned_cols=36 Identities=22% Similarity=0.219 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+|||+||+|-+|..+++.+. ..|.+|++++++.
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk-----~~G~~Vi~~~~s~ 173 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAK-----LKGCKVVGAAGSD 173 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 35789999999999999988877 6899999888764
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.20 E-value=0.24 Score=39.90 Aligned_cols=35 Identities=17% Similarity=0.120 Sum_probs=30.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
-++|.|.|+ |.+|..++..|+ ..|++|+.++|++.
T Consensus 4 ~~kI~vIGa-G~mG~~iA~~la-----~~G~~V~l~d~~~~ 38 (292)
T PRK07530 4 IKKVGVIGA-GQMGNGIAHVCA-----LAGYDVLLNDVSAD 38 (292)
T ss_pred CCEEEEECC-cHHHHHHHHHHH-----HCCCeEEEEeCCHH
Confidence 468999985 999999999999 68999999998743
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=92.19 E-value=0.35 Score=32.88 Aligned_cols=34 Identities=21% Similarity=0.098 Sum_probs=29.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.++++||.|| |-+|.+=++.|+ +.|.+|+.++..
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll-----~~gA~v~vis~~ 39 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLL-----EAGAKVTVISPE 39 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHC-----CCTBEEEEEESS
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEECCc
Confidence 5689999997 789999999999 799999999887
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.18 E-value=0.22 Score=40.14 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=30.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++|.|.| .|.+|+.+++.|. ..|++|++++|++.
T Consensus 2 ~~~IgviG-~G~mG~~~a~~l~-----~~g~~v~~~d~~~~ 36 (296)
T PRK11559 2 TMKVGFIG-LGIMGKPMSKNLL-----KAGYSLVVYDRNPE 36 (296)
T ss_pred CceEEEEc-cCHHHHHHHHHHH-----HCCCeEEEEcCCHH
Confidence 35799998 6999999999999 68999999988754
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=92.14 E-value=0.23 Score=38.85 Aligned_cols=27 Identities=19% Similarity=0.165 Sum_probs=23.7
Q ss_pred cCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 16 GVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 16 GatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.++|.||.+++++|+ ..|++|+.++|.
T Consensus 22 ~SSGgIG~AIA~~la-----~~Ga~Vvlv~~~ 48 (227)
T TIGR02114 22 HSTGHLGKIITETFL-----SAGHEVTLVTTK 48 (227)
T ss_pred CcccHHHHHHHHHHH-----HCCCEEEEEcCh
Confidence 348999999999999 799999988763
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=92.10 E-value=0.29 Score=40.22 Aligned_cols=69 Identities=16% Similarity=0.161 Sum_probs=48.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCC---------CC-------CC----------Ccc---
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG---------WF-------PT----------ALV--- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~---------~~-------~~----------~~v--- 58 (176)
+||.|+|++|.+|++++..|. ..+ .++..++...... .. .+ +.+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~-----~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvit 75 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLK-----LNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIP 75 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHH-----hCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEe
Confidence 489999999999999999998 455 3677776541110 00 11 111
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|....+.+.+.+.++
T Consensus 76 aG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~ 107 (310)
T cd01337 76 AGVPRKPGMTRDDLFNINAGIVRDLATAVAKA 107 (310)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 2245678899999999999999988
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.09 E-value=0.26 Score=39.84 Aligned_cols=35 Identities=34% Similarity=0.296 Sum_probs=28.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++|+|.| .|.||+.+++.|. +.||.|..+.++..
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~-----~~g~~v~i~g~d~~ 37 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALK-----EAGLVVRIIGRDRS 37 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHH-----HcCCeEEEEeecCc
Confidence 35666666 9999999999999 79999877766543
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.00 E-value=0.25 Score=41.03 Aligned_cols=35 Identities=20% Similarity=0.207 Sum_probs=28.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
+++||.|.||+|+.|..|++.|.. ....++...+.
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~----Hp~ve~~~~ss 35 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAG----HPDVELILISS 35 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhc----CCCeEEEEeec
Confidence 357899999999999999999995 45667665543
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=91.98 E-value=0.31 Score=39.82 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..+|+|.|.|.+|.+|+.++..|+ .+|+.|+.+.|+..
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~-----~~gatVtv~~~~t~ 194 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLL-----QAHCSVTVVHSRST 194 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHH-----HCCCEEEEECCCCC
Confidence 467999999999999999999999 79999999976543
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=91.96 E-value=1.1 Score=38.78 Aligned_cols=74 Identities=8% Similarity=-0.085 Sum_probs=46.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCC--CCCCCcEEEEEecCCCCC----------------CCC-------------CCcc
Q 030483 10 SVALIIGVTGISGLSLAEALKNPT--TPGSPWKVYGAARRPPPG----------------WFP-------------TALV 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~--~~~~g~~V~~l~R~~~~~----------------~~~-------------~~~v 58 (176)
-+|+||||+|.||.+|+..+.+-+ -.++...++.++..+... ... .+++
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~~~ea~~daDvv 203 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTDLDVAFKDAHVI 203 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEECCHHHhCCCCEE
Confidence 579999999999999999998300 000112245555521110 000 0111
Q ss_pred ----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+....++.|+...+.+.+++.+.
T Consensus 204 Iitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~ 238 (452)
T cd05295 204 VLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKN 238 (452)
T ss_pred EECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1245567899999999999999987
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=91.95 E-value=0.47 Score=31.02 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=28.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCC-CcEEEEEec
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAAR 46 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R 46 (176)
...++++|.|. |.+|+.++..|. +. +.+|+.++|
T Consensus 21 ~~~~~v~i~G~-G~~g~~~a~~l~-----~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGA-GEVGKGIAKLLA-----DEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHH-----HcCCCEEEEEcC
Confidence 34678999998 999999999999 45 678888877
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.94 E-value=1 Score=38.14 Aligned_cols=34 Identities=24% Similarity=0.218 Sum_probs=28.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|-|.| +|++|--...-|. +.||+|++++..+.
T Consensus 1 MkI~viG-tGYVGLv~g~~lA-----~~GHeVv~vDid~~ 34 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLA-----ELGHEVVCVDIDES 34 (414)
T ss_pred CceEEEC-CchHHHHHHHHHH-----HcCCeEEEEeCCHH
Confidence 4788888 8999988888888 79999999987654
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.89 E-value=0.3 Score=39.53 Aligned_cols=35 Identities=17% Similarity=0.130 Sum_probs=30.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
++|.|.|+ |.+|+.++..|+ ..|++|+.+++++..
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a-----~~G~~V~l~d~~~~~ 40 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCA-----RAGVDVLVFETTEEL 40 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHH-----hCCCEEEEEECCHHH
Confidence 47999986 999999999999 699999999987653
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=91.86 E-value=0.28 Score=39.49 Aligned_cols=36 Identities=22% Similarity=0.259 Sum_probs=31.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||+||+|-+|..+++.+. ..|.+|+++++++
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~-----~~G~~vi~~~~s~ 178 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAK-----IKGCKVIGCAGSD 178 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 45789999999999999988888 6899999888764
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=91.82 E-value=0.28 Score=41.81 Aligned_cols=36 Identities=31% Similarity=0.417 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++++|+|+ |.+|+.+++.|. +.|++|+++++++.
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~-----~~~~~v~vid~~~~ 265 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLE-----KEGYSVKLIERDPE 265 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCHH
Confidence 3578999998 999999999999 68999999987753
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=91.77 E-value=0.26 Score=40.11 Aligned_cols=35 Identities=14% Similarity=0.159 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~ 49 (176)
.++||+||+|-+|..+++.+. ..|. +|++++++..
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk-----~~G~~~Vi~~~~s~~ 191 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGR-----LLGCSRVVGICGSDE 191 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHH-----HcCCCEEEEEcCCHH
Confidence 689999999999999998887 6898 7999887643
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=91.71 E-value=0.3 Score=39.41 Aligned_cols=34 Identities=18% Similarity=0.279 Sum_probs=29.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.| .|.+|+.++..|+ ..|++|+++++++.
T Consensus 5 ~~V~vIG-~G~mG~~iA~~l~-----~~G~~V~~~d~~~~ 38 (295)
T PLN02545 5 KKVGVVG-AGQMGSGIAQLAA-----AAGMDVWLLDSDPA 38 (295)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----hcCCeEEEEeCCHH
Confidence 5799998 5999999999999 68999999998753
|
|
| >COG0794 GutQ Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.71 E-value=1.8 Score=33.32 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=28.2
Q ss_pred CCeEEEEcC--ChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 9 KSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 9 ~~~vLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
+.+|+|+|. ||+||+.++..|. .-|..++.+.
T Consensus 39 ~gkv~V~G~GkSG~Igkk~Aa~L~-----s~G~~a~fv~ 72 (202)
T COG0794 39 KGKVFVTGVGKSGLIGKKFAARLA-----STGTPAFFVG 72 (202)
T ss_pred CCcEEEEcCChhHHHHHHHHHHHH-----ccCCceEEec
Confidence 457999887 9999999999999 7999988776
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=91.69 E-value=0.29 Score=38.81 Aligned_cols=35 Identities=17% Similarity=0.115 Sum_probs=29.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCC---cEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP---WKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g---~~V~~l~R~~~ 49 (176)
+++|.|.| .|-+|+.++..|. ..| ++|++++|++.
T Consensus 2 mm~I~iIG-~G~mG~~la~~l~-----~~g~~~~~v~v~~r~~~ 39 (267)
T PRK11880 2 MKKIGFIG-GGNMASAIIGGLL-----ASGVPAKDIIVSDPSPE 39 (267)
T ss_pred CCEEEEEe-chHHHHHHHHHHH-----hCCCCcceEEEEcCCHH
Confidence 45799998 5999999999999 566 78999998753
|
|
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=91.68 E-value=0.51 Score=30.56 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=22.2
Q ss_pred CCeEEEEcCChHHHHH--HHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLS--LAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~--l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.|+|||+|+|.-.|.+ ++..+- .|.+.+++....
T Consensus 39 pK~VLViGaStGyGLAsRIa~aFg------~gA~TiGV~fEk 74 (78)
T PF12242_consen 39 PKKVLVIGASTGYGLASRIAAAFG------AGADTIGVSFEK 74 (78)
T ss_dssp -SEEEEES-SSHHHHHHHHHHHHC------C--EEEEEE---
T ss_pred CceEEEEecCCcccHHHHHHHHhc------CCCCEEEEeecc
Confidence 4899999999888877 666665 777888887654
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.63 E-value=0.29 Score=39.77 Aligned_cols=33 Identities=30% Similarity=0.297 Sum_probs=29.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++|.|.| .|-+|+.++..|. ..|++|+.++|++
T Consensus 2 mkI~iiG-~G~mG~~~a~~L~-----~~g~~V~~~~r~~ 34 (325)
T PRK00094 2 MKIAVLG-AGSWGTALAIVLA-----RNGHDVTLWARDP 34 (325)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----hCCCEEEEEECCH
Confidence 4799998 5899999999999 6899999999864
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.61 E-value=0.37 Score=39.53 Aligned_cols=33 Identities=30% Similarity=0.283 Sum_probs=29.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++|.|.| .|-+|+.++..|. ..|++|+.++|++
T Consensus 5 m~I~iIG-~G~mG~~ia~~L~-----~~G~~V~~~~r~~ 37 (328)
T PRK14618 5 MRVAVLG-AGAWGTALAVLAA-----SKGVPVRLWARRP 37 (328)
T ss_pred CeEEEEC-cCHHHHHHHHHHH-----HCCCeEEEEeCCH
Confidence 3799997 6899999999999 6899999999964
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=91.59 E-value=0.25 Score=40.69 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=28.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|||+||+|-+|+.+++-+. ..|+.+++.+.+.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk-----~~G~~~v~~~~s~ 177 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAK-----ALGATVVAVVSSS 177 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHH-----HcCCcEEEEecCH
Confidence 6799999999999999999888 6886655555443
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.55 E-value=0.34 Score=39.00 Aligned_cols=34 Identities=15% Similarity=0.058 Sum_probs=29.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.| +|.+|+.++..|. ..|++|+.+++++.
T Consensus 4 ~kIaViG-aG~mG~~iA~~la-----~~G~~V~l~d~~~~ 37 (287)
T PRK08293 4 KNVTVAG-AGVLGSQIAFQTA-----FHGFDVTIYDISDE 37 (287)
T ss_pred cEEEEEC-CCHHHHHHHHHHH-----hcCCeEEEEeCCHH
Confidence 5799998 5999999999999 68999999998753
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=91.39 E-value=0.33 Score=35.73 Aligned_cols=34 Identities=26% Similarity=0.295 Sum_probs=28.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|-+.| .|-.|+.+++.|+ ..||+|++.+|++.
T Consensus 2 ~~Ig~IG-lG~mG~~~a~~L~-----~~g~~v~~~d~~~~ 35 (163)
T PF03446_consen 2 MKIGFIG-LGNMGSAMARNLA-----KAGYEVTVYDRSPE 35 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHH-----HTTTEEEEEESSHH
T ss_pred CEEEEEc-hHHHHHHHHHHHH-----hcCCeEEeeccchh
Confidence 5788888 5999999999999 79999999998754
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.33 E-value=0.42 Score=39.43 Aligned_cols=35 Identities=17% Similarity=0.154 Sum_probs=30.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
-++|.|.| +|.+|+.++..|+ ..|++|+.+++++.
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a-----~aG~~V~l~D~~~~ 41 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARAL-----AHGLDVVAWDPAPG 41 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-----hCCCeEEEEeCCHH
Confidence 46898998 5999999999999 69999999998753
|
|
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.30 E-value=0.36 Score=38.96 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=29.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.| .|.+|+.++..|+ ..|++|+.+++++.
T Consensus 4 ~~I~ViG-aG~mG~~iA~~la-----~~G~~V~l~d~~~~ 37 (291)
T PRK06035 4 KVIGVVG-SGVMGQGIAQVFA-----RTGYDVTIVDVSEE 37 (291)
T ss_pred cEEEEEC-ccHHHHHHHHHHH-----hcCCeEEEEeCCHH
Confidence 5799998 5999999999999 68999999998753
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.25 E-value=0.38 Score=39.72 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=30.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||+|++|-+|..+++.+. ..|.+|+++++++
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk-----~~G~~Vi~~~~~~ 193 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAK-----LHGCYVVGSAGSS 193 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHH-----HcCCEEEEEcCCH
Confidence 35789999999999999998887 6899999887654
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.46 Score=38.57 Aligned_cols=37 Identities=22% Similarity=0.156 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..+++++|+|+++.+|+.|+..|+ ..|..|+.+.++.
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~-----~~gatVtv~~s~t 192 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLL-----QKNASVTILHSRS 192 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHH-----HCCCeEEEEeCCc
Confidence 457899999999999999999999 6889999887754
|
|
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.23 E-value=0.32 Score=38.99 Aligned_cols=34 Identities=18% Similarity=0.171 Sum_probs=29.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.|+ |.+|..++..|+ ..|++|+.+++++.
T Consensus 4 ~kI~VIG~-G~mG~~ia~~la-----~~g~~V~~~d~~~~ 37 (282)
T PRK05808 4 QKIGVIGA-GTMGNGIAQVCA-----VAGYDVVMVDISDA 37 (282)
T ss_pred cEEEEEcc-CHHHHHHHHHHH-----HCCCceEEEeCCHH
Confidence 47889985 999999999999 68999999987653
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=91.20 E-value=0.46 Score=41.01 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=30.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++|+|.|+ |.+|..+++.|. ..|++|+++++++
T Consensus 15 ~~~~v~viG~-G~~G~~~A~~L~-----~~G~~V~~~d~~~ 49 (480)
T PRK01438 15 QGLRVVVAGL-GVSGFAAADALL-----ELGARVTVVDDGD 49 (480)
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEeCCc
Confidence 4678999996 789999999998 7999999998654
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=91.19 E-value=0.24 Score=41.21 Aligned_cols=35 Identities=34% Similarity=0.279 Sum_probs=29.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
.+.+|+|.|+ |.+|++++..|. ..|. +++.+++..
T Consensus 23 ~~~~VlVvG~-GglGs~va~~La-----~aGvg~i~lvD~D~ 58 (339)
T PRK07688 23 REKHVLIIGA-GALGTANAEMLV-----RAGVGKVTIVDRDY 58 (339)
T ss_pred cCCcEEEECC-CHHHHHHHHHHH-----HcCCCeEEEEeCCc
Confidence 4678999997 779999999999 6888 688888753
|
|
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.07 E-value=0.42 Score=38.85 Aligned_cols=33 Identities=21% Similarity=0.167 Sum_probs=28.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++|.|.|+ |.+|+.++..|+ ..|++|+.++++.
T Consensus 5 ~~I~vIGa-G~mG~~iA~~l~-----~~g~~V~~~d~~~ 37 (311)
T PRK06130 5 QNLAIIGA-GTMGSGIAALFA-----RKGLQVVLIDVME 37 (311)
T ss_pred cEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCH
Confidence 57899974 999999999999 6899999998765
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=91.07 E-value=0.4 Score=37.89 Aligned_cols=36 Identities=19% Similarity=0.108 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+++|+|++|-+|..+++.+. ..|++|+.++++.
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~-----~~g~~v~~~~~~~ 174 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAK-----ALGARVIATAGSE 174 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHH-----HcCCEEEEEcCCH
Confidence 45789999999999999999998 6899998888753
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A | Back alignment and domain information |
|---|
Probab=91.02 E-value=0.38 Score=33.58 Aligned_cols=79 Identities=14% Similarity=0.172 Sum_probs=44.8
Q ss_pred CeEEEEcCC---hHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--CCCcccC---cHH-HHHHHHHHHHHHHHHHH
Q 030483 10 SVALIIGVT---GISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--PTALVQE---SEE-VNIFKNSTMLKNVLSVL 80 (176)
Q Consensus 10 ~~vLVtGat---GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~---~~~-~~~~~N~~~t~~ll~a~ 80 (176)
|++.|.|+| +-.|..+++.|. +.|++|+.+.-+...-.. ..+.+.+ ..+ ..+-++..-+..+++.|
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~-----~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv~~~~~~~~~~v~~~ 75 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLK-----AAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVVCVPPDKVPEIVDEA 75 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHH-----HTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-S-HHHHHHHHHHH
T ss_pred CEEEEEcccCCCCChHHHHHHHHH-----hCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEEEcCHHHHHHHHHHH
Confidence 578999997 778999999999 699999998655432110 0011111 111 11234445556788888
Q ss_pred HhcCCCCCCccEEEEecc
Q 030483 81 VSSNSGRSRLRHVALLTG 98 (176)
Q Consensus 81 ~~~~~~~~~v~~vv~~Ss 98 (176)
.+. +++.+++.+|
T Consensus 76 ~~~-----g~~~v~~~~g 88 (116)
T PF13380_consen 76 AAL-----GVKAVWLQPG 88 (116)
T ss_dssp HHH-----T-SEEEE-TT
T ss_pred HHc-----CCCEEEEEcc
Confidence 877 5788887764
|
|
| >PRK07236 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=91.02 E-value=0.42 Score=39.92 Aligned_cols=37 Identities=30% Similarity=0.414 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+.++|+|.|| |..|..++..|. ..|++|+.+.|.+.
T Consensus 4 ~~~~~ViIVGa-G~aGl~~A~~L~-----~~G~~v~v~E~~~~ 40 (386)
T PRK07236 4 MSGPRAVVIGG-SLGGLFAALLLR-----RAGWDVDVFERSPT 40 (386)
T ss_pred CCCCeEEEECC-CHHHHHHHHHHH-----hCCCCEEEEecCCC
Confidence 45578999995 899999999999 68999999998763
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=90.88 E-value=0.44 Score=39.14 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=26.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
.+|.|.||||+.|..|++.|.. ....++..+.
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~----HP~~el~~l~ 33 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSG----RDDIELLSIA 33 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhC----CCCeEEEEEe
Confidence 4799999999999999999995 4556766665
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=90.85 E-value=0.43 Score=38.81 Aligned_cols=36 Identities=33% Similarity=0.454 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++++|+|. |-+|+.++..|. ..|.+|++.+|++.
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~-----~~Ga~V~v~~r~~~ 186 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLK-----ALGANVTVGARKSA 186 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 4689999996 779999999999 68999999999854
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=90.85 E-value=0.42 Score=37.91 Aligned_cols=36 Identities=17% Similarity=0.200 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++++|+|++|.+|..+++.+. ..|.+|+.++++.
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~-----~~g~~v~~~~~~~ 179 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLAR-----WAGARVIATASSA 179 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 45789999999999999999998 6889999988754
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=90.59 E-value=0.19 Score=38.52 Aligned_cols=34 Identities=18% Similarity=0.078 Sum_probs=28.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~ 47 (176)
.+++|+|.|+. -+|+.++..|. ..|+ +++.++++
T Consensus 20 ~~~~V~IvG~G-glGs~ia~~La-----~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLG-GLGSNVAINLA-----RAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcC-HHHHHHHHHHH-----HcCCCEEEEECCC
Confidence 56789999975 49999999999 6898 58888876
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=90.58 E-value=0.3 Score=40.54 Aligned_cols=36 Identities=31% Similarity=0.221 Sum_probs=29.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
..+++|+|.|+.| +|+++++.|. ..|+ +++.++++.
T Consensus 22 L~~~~VlIiG~Gg-lGs~va~~La-----~aGvg~i~lvD~D~ 58 (338)
T PRK12475 22 IREKHVLIVGAGA-LGAANAEALV-----RAGIGKLTIADRDY 58 (338)
T ss_pred hcCCcEEEECCCH-HHHHHHHHHH-----HcCCCEEEEEcCCc
Confidence 3567899999755 9999999999 6887 677777764
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=90.57 E-value=0.42 Score=39.25 Aligned_cols=68 Identities=18% Similarity=0.198 Sum_probs=47.3
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCC---------C-------CCC----------Ccc----
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPG---------W-------FPT----------ALV---- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~---------~-------~~~----------~~v---- 58 (176)
||.|+|++|.||++++..|+ ..+. ++..+++.+... . ... +.+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~-----~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvita 75 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLK-----LQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPA 75 (312)
T ss_pred CEEEECCCCHHHHHHHHHHH-----hCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeC
Confidence 58899999999999999998 3454 677777654210 0 000 111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|....+.+.+.+.+.
T Consensus 76 G~~~~~g~~R~dll~~N~~I~~~i~~~i~~~ 106 (312)
T TIGR01772 76 GVPRKPGMTRDDLFNVNAGIVKDLVAAVAES 106 (312)
T ss_pred CCCCCCCccHHHHHHHhHHHHHHHHHHHHHh
Confidence 1244567889999999999999887
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=90.56 E-value=0.38 Score=40.45 Aligned_cols=33 Identities=12% Similarity=0.143 Sum_probs=26.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcE---EEEEec
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWK---VYGAAR 46 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~---V~~l~R 46 (176)
++|-|.||||++|+.|++.|++ +..++ ++.++.
T Consensus 2 ~~VAIVGATG~vG~ell~llL~----~~~f~~~~l~~~ss 37 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVE----ENDFDLIEPVFFST 37 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHh----CCCCCcCcEEEecc
Confidence 5799999999999999996664 56776 555554
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=90.50 E-value=0.45 Score=36.77 Aligned_cols=35 Identities=29% Similarity=0.411 Sum_probs=30.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||+|+++ +|..+++.+. ..|.+|+++++++
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~-----~~g~~v~~~~~~~ 168 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAK-----AAGARVIVTDRSD 168 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHH-----HcCCeEEEEcCCH
Confidence 356899999999 9999998888 6889999998864
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=90.48 E-value=0.2 Score=38.42 Aligned_cols=36 Identities=28% Similarity=0.172 Sum_probs=28.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
..+.+|+|.|+ |-+|+++++.|. ..|. +++.+++..
T Consensus 19 l~~~~VlviG~-GglGs~ia~~La-----~~Gv~~i~lvD~d~ 55 (202)
T TIGR02356 19 LLNSHVLIIGA-GGLGSPAALYLA-----GAGVGTIVIVDDDH 55 (202)
T ss_pred hcCCCEEEECC-CHHHHHHHHHHH-----HcCCCeEEEecCCE
Confidence 35678999995 459999999999 6887 688887753
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK05708 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=90.24 E-value=0.48 Score=38.62 Aligned_cols=34 Identities=24% Similarity=0.094 Sum_probs=29.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.|+|+|.|+ |-||+.++-.|. +.|++|+.++|+.
T Consensus 2 ~m~I~IiGa-GaiG~~~a~~L~-----~~G~~V~lv~r~~ 35 (305)
T PRK05708 2 SMTWHILGA-GSLGSLWACRLA-----RAGLPVRLILRDR 35 (305)
T ss_pred CceEEEECC-CHHHHHHHHHHH-----hCCCCeEEEEech
Confidence 468999996 669999999999 6899999999964
|
|
| >PRK00711 D-amino acid dehydrogenase small subunit; Validated | Back alignment and domain information |
|---|
Probab=90.21 E-value=0.52 Score=39.57 Aligned_cols=33 Identities=24% Similarity=0.380 Sum_probs=29.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|+|.| .|++|..++.+|. ..|++|..+.|..
T Consensus 1 ~~v~IVG-~Gi~Gls~A~~l~-----~~g~~V~vle~~~ 33 (416)
T PRK00711 1 MRVVVLG-SGVIGVTSAWYLA-----QAGHEVTVIDRQP 33 (416)
T ss_pred CEEEEEC-CcHHHHHHHHHHH-----HCCCEEEEEeCCC
Confidence 3689999 4999999999999 6899999999974
|
|
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=90.18 E-value=0.44 Score=38.39 Aligned_cols=31 Identities=19% Similarity=0.185 Sum_probs=27.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
|+|+|.| .|-+|..++..|. +.|++|+.++|
T Consensus 1 mkI~IiG-~G~iG~~~a~~L~-----~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVVG-AGAVGGTFGGRLL-----EAGRDVTFLVR 31 (305)
T ss_pred CeEEEEC-CCHHHHHHHHHHH-----HCCCceEEEec
Confidence 4789997 6889999999999 68999999998
|
|
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=90.18 E-value=0.55 Score=37.32 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
...+++|+|++|-+|..+++.+. ..|++|+.++++.
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~-----~~g~~v~~~~~~~ 179 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIAN-----AAGATVIATTRTS 179 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHH-----HcCCEEEEEcCCH
Confidence 34689999999999999999998 7899999888764
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.16 E-value=0.54 Score=38.89 Aligned_cols=37 Identities=32% Similarity=0.223 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++++.|+|.| .|++|...+-+|. ..|++|+.+.+...
T Consensus 2 ~~~~~vvVIG-gGi~Gls~A~~La-----~~G~~V~vie~~~~ 38 (387)
T COG0665 2 SMKMDVVIIG-GGIVGLSAAYYLA-----ERGADVTVLEAGEA 38 (387)
T ss_pred CCcceEEEEC-CcHHHHHHHHHHH-----HcCCEEEEEecCcc
Confidence 3567899999 8999999999999 69999999987654
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=90.15 E-value=0.52 Score=37.91 Aligned_cols=36 Identities=19% Similarity=0.257 Sum_probs=31.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..++||.|++|.+|..+++.+. ..|.+|+++++++.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~-----~~g~~v~~~~~~~~ 182 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILA-----KLGYEVVASTGKAD 182 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHH-----HCCCeEEEEecCHH
Confidence 4689999999999999988888 68999998887653
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >PRK11259 solA N-methyltryptophan oxidase; Provisional | Back alignment and domain information |
|---|
Probab=90.14 E-value=0.53 Score=38.85 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=29.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
-.|+|.| .|.+|..++.+|. +.|++|+.+.|...
T Consensus 4 ~dv~IIG-gGi~G~s~A~~L~-----~~g~~V~lie~~~~ 37 (376)
T PRK11259 4 YDVIVIG-LGSMGSAAGYYLA-----RRGLRVLGLDRFMP 37 (376)
T ss_pred ccEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEecccC
Confidence 4588888 4999999999999 68999999998753
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=90.07 E-value=1.8 Score=35.57 Aligned_cols=71 Identities=18% Similarity=0.227 Sum_probs=47.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------CCCC---------------Ccc---
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------WFPT---------------ALV--- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~~~~---------------~~v--- 58 (176)
++||.|+|+ |.+|+.++..|+. ....-++..++...... .... +.+
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~---~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvit 78 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILA---KGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIVT 78 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHh---cCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEEC
Confidence 468999996 9999999999983 02223688888654321 0000 111
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+....+..|....+.+.+.+.+.
T Consensus 79 aG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~ 110 (312)
T cd05293 79 AGARQNEGESRLDLVQRNVDIFKGIIPKLVKY 110 (312)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1244567889999999999998887
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=90.01 E-value=0.95 Score=32.78 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=32.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+..+++++|.|.+..+|..|+..|. .+|..|+...++
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~-----~~gatV~~~~~~ 61 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQ-----RDGATVYSCDWK 61 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEeCCC
Confidence 3468999999999999999999999 689999888654
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=89.93 E-value=0.64 Score=37.26 Aligned_cols=34 Identities=12% Similarity=0.078 Sum_probs=28.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCC----cEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP----WKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g----~~V~~l~R~~ 48 (176)
.++|.+.| .|-+|+++++.|+ ..| ++|+..+|++
T Consensus 3 ~mkI~~IG-~G~mG~aia~~l~-----~~g~~~~~~v~v~~r~~ 40 (279)
T PRK07679 3 IQNISFLG-AGSIAEAIIGGLL-----HANVVKGEQITVSNRSN 40 (279)
T ss_pred CCEEEEEC-ccHHHHHHHHHHH-----HCCCCCcceEEEECCCC
Confidence 35799998 8999999999999 465 7888888865
|
|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=89.92 E-value=0.73 Score=39.40 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=29.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..++++|+|+. -+|.++++.|. +.|++|.+.+..+
T Consensus 4 ~~~~~~v~G~g-~~G~~~a~~l~-----~~g~~v~~~d~~~ 38 (445)
T PRK04308 4 QNKKILVAGLG-GTGISMIAYLR-----KNGAEVAAYDAEL 38 (445)
T ss_pred CCCEEEEECCC-HHHHHHHHHHH-----HCCCEEEEEeCCC
Confidence 45789999985 59999999998 7999999988654
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=89.72 E-value=0.75 Score=38.42 Aligned_cols=28 Identities=21% Similarity=0.407 Sum_probs=23.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWK 40 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~ 40 (176)
..+|.|.||||++|+.|++.|.+ +..++
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~----h~~f~ 32 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEK----ETKFN 32 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHH----CCCCC
Confidence 36899999999999999999983 35666
|
|
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=89.71 E-value=0.62 Score=42.27 Aligned_cols=35 Identities=26% Similarity=0.242 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++|.|.| .|-+|+++++.|. ..|++|++++|+.
T Consensus 368 ~~~kIgIIG-lG~mG~slA~~L~-----~~G~~V~~~dr~~ 402 (667)
T PLN02712 368 SKLKIAIVG-FGNFGQFLAKTMV-----KQGHTVLAYSRSD 402 (667)
T ss_pred CCCEEEEEe-cCHHHHHHHHHHH-----HCcCEEEEEECCh
Confidence 467899999 8999999999999 6889999999874
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.57 E-value=0.77 Score=34.47 Aligned_cols=36 Identities=17% Similarity=0.209 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
...+|+|-||-|-+|++.++.+. .++|-|..++-..
T Consensus 2 sagrVivYGGkGALGSacv~~Fk-----annywV~siDl~e 37 (236)
T KOG4022|consen 2 SAGRVIVYGGKGALGSACVEFFK-----ANNYWVLSIDLSE 37 (236)
T ss_pred CCceEEEEcCcchHhHHHHHHHH-----hcCeEEEEEeecc
Confidence 45689999999999999999999 7899887776543
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=89.56 E-value=0.72 Score=40.13 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=30.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..+++++|+|+ |-+|++++..|. ..|++|+..+|+.
T Consensus 330 ~~~k~vlIiGa-GgiG~aia~~L~-----~~G~~V~i~~R~~ 365 (477)
T PRK09310 330 LNNQHVAIVGA-GGAAKAIATTLA-----RAGAELLIFNRTK 365 (477)
T ss_pred cCCCEEEEEcC-cHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 35678999996 789999999999 6889998887753
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=89.53 E-value=0.22 Score=35.52 Aligned_cols=34 Identities=35% Similarity=0.386 Sum_probs=26.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
+...++|-|.|+ |-+|.+|.+.|. ..||+|.++.
T Consensus 7 ~~~~l~I~iIGa-GrVG~~La~aL~-----~ag~~v~~v~ 40 (127)
T PF10727_consen 7 QAARLKIGIIGA-GRVGTALARALA-----RAGHEVVGVY 40 (127)
T ss_dssp -----EEEEECT-SCCCCHHHHHHH-----HTTSEEEEES
T ss_pred CCCccEEEEECC-CHHHHHHHHHHH-----HCCCeEEEEE
Confidence 345679999997 999999999999 7999998875
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=89.51 E-value=0.7 Score=38.24 Aligned_cols=36 Identities=25% Similarity=0.252 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++.|.| .|-||+.+++.|. ..|++|++.+|.+.
T Consensus 145 ~g~~VgIIG-~G~IG~~vA~~L~-----~~G~~V~~~d~~~~ 180 (330)
T PRK12480 145 KNMTVAIIG-TGRIGAATAKIYA-----GFGATITAYDAYPN 180 (330)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----hCCCEEEEEeCChh
Confidence 467899998 6999999999999 79999999998753
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=89.46 E-value=0.79 Score=38.37 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=30.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+|+|||+|+ |.+|+.++..+. ..|++|+.++..+.
T Consensus 12 ~~~ilIiG~-g~~~~~~~~a~~-----~~G~~v~~~~~~~~ 46 (395)
T PRK09288 12 ATRVMLLGS-GELGKEVAIEAQ-----RLGVEVIAVDRYAN 46 (395)
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEeCCCC
Confidence 568999985 689999999998 68999999988754
|
|
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=89.41 E-value=0.73 Score=32.95 Aligned_cols=32 Identities=19% Similarity=0.336 Sum_probs=26.2
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
|.|.|+||-||+..++-+.++ .+.|+|++++=
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~---~d~f~v~~Lsa 32 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKH---PDKFEVVALSA 32 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHC---TTTEEEEEEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhC---CCceEEEEEEc
Confidence 579999999999999888741 45699999875
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=89.38 E-value=2.6 Score=35.76 Aligned_cols=21 Identities=19% Similarity=0.170 Sum_probs=19.9
Q ss_pred CeEEEEcCChHHHHHHHHHhh
Q 030483 10 SVALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~ 30 (176)
-||.|+|++|.+|++++..|.
T Consensus 45 ~KV~IIGAaG~VG~~~A~~l~ 65 (387)
T TIGR01757 45 VNVAVSGAAGMISNHLLFMLA 65 (387)
T ss_pred eEEEEECCCcHHHHHHHHHHH
Confidence 589999999999999999998
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=89.37 E-value=0.7 Score=38.26 Aligned_cols=36 Identities=25% Similarity=0.231 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++.|.|- |-||+.+++.|. .-|.+|++++|.+.
T Consensus 149 ~gktvgIiG~-G~IG~~vA~~l~-----~~G~~V~~~d~~~~ 184 (333)
T PRK13243 149 YGKTIGIIGF-GRIGQAVARRAK-----GFGMRILYYSRTRK 184 (333)
T ss_pred CCCEEEEECc-CHHHHHHHHHHH-----HCCCEEEEECCCCC
Confidence 5789999995 999999999999 79999999998653
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=89.25 E-value=0.68 Score=37.08 Aligned_cols=36 Identities=19% Similarity=0.103 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+++|+|+++-+|..+++.+. ..|++|+.++++.
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~-----~~g~~v~~~~~~~ 201 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAK-----LFGATVIATAGSE 201 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 35689999999999999999998 7899998888764
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=89.18 E-value=0.85 Score=33.56 Aligned_cols=34 Identities=26% Similarity=0.194 Sum_probs=28.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+++|+|.|| |-+|...++.|+ +.|++|+.++..
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll-----~~ga~V~VIsp~ 45 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLK-----DTGAFVTVVSPE 45 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEcCc
Confidence 4789999995 779999999999 799999988643
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=89.15 E-value=0.52 Score=40.03 Aligned_cols=33 Identities=30% Similarity=0.352 Sum_probs=29.2
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+|.|.| .|.+|..++..|. +.|++|+++++++.
T Consensus 2 kI~vIG-lG~~G~~lA~~La-----~~G~~V~~~d~~~~ 34 (411)
T TIGR03026 2 KIAVIG-LGYVGLPLAALLA-----DLGHEVTGVDIDQE 34 (411)
T ss_pred EEEEEC-CCchhHHHHHHHH-----hcCCeEEEEECCHH
Confidence 688887 7999999999999 79999999998754
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=89.12 E-value=0.64 Score=37.43 Aligned_cols=36 Identities=19% Similarity=0.226 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||.|++|.+|..+++.+. ..|.+|+.+++++
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~-----~~G~~vi~~~~~~ 180 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAK-----LLGARVVGIAGSD 180 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 35789999999999999999888 6899999888754
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=89.04 E-value=0.26 Score=37.71 Aligned_cols=35 Identities=23% Similarity=0.211 Sum_probs=28.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~ 48 (176)
.+.+|+|.|++| +|+++++.|. ..|.. ++.++...
T Consensus 18 ~~s~VlviG~gg-lGsevak~L~-----~~GVg~i~lvD~d~ 53 (198)
T cd01485 18 RSAKVLIIGAGA-LGAEIAKNLV-----LAGIDSITIVDHRL 53 (198)
T ss_pred hhCcEEEECCCH-HHHHHHHHHH-----HcCCCEEEEEECCc
Confidence 467899999988 9999999999 67875 77777653
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=88.93 E-value=0.72 Score=37.18 Aligned_cols=36 Identities=17% Similarity=0.173 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+++|.|++|-+|..+++.+. ..|.+|+.+++++
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~-----~~g~~v~~~~~~~ 174 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAK-----LAGCHVIGTCSSD 174 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHH-----HcCCeEEEEeCcH
Confidence 35789999999999999888888 6899999988764
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=88.92 E-value=0.73 Score=36.54 Aligned_cols=36 Identities=19% Similarity=0.135 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+++|+|++|-+|..+++.+. ..|.+|+.+.++.
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~-----~~g~~v~~~~~~~ 174 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAK-----AFGARVFTTAGSD 174 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 35789999999999999988888 7899999888754
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=88.82 E-value=0.89 Score=36.91 Aligned_cols=34 Identities=26% Similarity=0.129 Sum_probs=28.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~ 49 (176)
+||.|+|+ |.+|+.++..|. ..|. +|+.+++...
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la-----~~~~~ev~L~D~~~~ 37 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLA-----LKELGDVVLFDIVEG 37 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEEECCCc
Confidence 58999998 999999999998 4554 8999988543
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=88.77 E-value=0.25 Score=37.74 Aligned_cols=36 Identities=25% Similarity=0.224 Sum_probs=28.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~ 48 (176)
..+.+|||.|+.| +|+++++.|. ..|.. ++.++...
T Consensus 19 L~~s~VlIiG~gg-lG~evak~La-----~~GVg~i~lvD~d~ 55 (197)
T cd01492 19 LRSARILLIGLKG-LGAEIAKNLV-----LSGIGSLTILDDRT 55 (197)
T ss_pred HHhCcEEEEcCCH-HHHHHHHHHH-----HcCCCEEEEEECCc
Confidence 3467899999877 9999999999 68875 77776553
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1 | Back alignment and domain information |
|---|
Probab=88.71 E-value=1.1 Score=35.08 Aligned_cols=36 Identities=22% Similarity=0.121 Sum_probs=31.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++++++|.| .|-+|+++++.|. +.|..|++++.+.
T Consensus 29 l~~~~v~I~G-~G~VG~~~a~~L~-----~~g~~vv~v~D~~ 64 (227)
T cd01076 29 LAGARVAIQG-FGNVGSHAARFLH-----EAGAKVVAVSDSD 64 (227)
T ss_pred ccCCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEECCC
Confidence 5678999998 7999999999999 7899999887664
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids |
| >PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=88.70 E-value=0.76 Score=37.62 Aligned_cols=32 Identities=28% Similarity=0.240 Sum_probs=28.4
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+|.|.|+ |-+|++++..|. +.|++|..++|+.
T Consensus 2 kI~IiGa-Ga~G~ala~~L~-----~~g~~V~l~~r~~ 33 (326)
T PRK14620 2 KISILGA-GSFGTAIAIALS-----SKKISVNLWGRNH 33 (326)
T ss_pred EEEEECc-CHHHHHHHHHHH-----HCCCeEEEEecCH
Confidence 6899996 889999999999 6899999999864
|
|
| >PRK06753 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=88.62 E-value=0.77 Score=37.93 Aligned_cols=34 Identities=29% Similarity=0.345 Sum_probs=30.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|+|.|| |..|..++..|. ..|++|+.+.|++.
T Consensus 1 ~~V~IvGg-G~aGl~~A~~L~-----~~g~~v~v~E~~~~ 34 (373)
T PRK06753 1 MKIAIIGA-GIGGLTAAALLQ-----EQGHEVKVFEKNES 34 (373)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCcEEEEecCCc
Confidence 47999996 899999999999 69999999998764
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=88.52 E-value=0.78 Score=40.04 Aligned_cols=34 Identities=24% Similarity=0.138 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.| +|.+|+.++..|+ ..|++|+++++++.
T Consensus 5 ~kIavIG-~G~MG~~iA~~la-----~~G~~V~v~D~~~~ 38 (495)
T PRK07531 5 MKAACIG-GGVIGGGWAARFL-----LAGIDVAVFDPHPE 38 (495)
T ss_pred CEEEEEC-cCHHHHHHHHHHH-----hCCCeEEEEeCCHH
Confidence 5788886 8999999999999 68999999998753
|
|
| >PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional | Back alignment and domain information |
|---|
Probab=88.51 E-value=0.82 Score=39.26 Aligned_cols=36 Identities=25% Similarity=0.293 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++|+|.|| |+.|...+..|. ..|++|+.+.+.+.
T Consensus 139 ~~~~VvIIGg-GpaGl~aA~~l~-----~~g~~V~lie~~~~ 174 (457)
T PRK11749 139 TGKKVAVIGA-GPAGLTAAHRLA-----RKGYDVTIFEARDK 174 (457)
T ss_pred CCCcEEEECC-CHHHHHHHHHHH-----hCCCeEEEEccCCC
Confidence 4578999997 999999999999 68999999988753
|
|
| >PRK05678 succinyl-CoA synthetase subunit alpha; Validated | Back alignment and domain information |
|---|
Probab=88.49 E-value=1.4 Score=35.97 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=28.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~ 47 (176)
++.+|+|-|.+|-+|+.+.+.|+ +.|++ |+.+..+
T Consensus 7 ~~~~~~v~~~~~~~g~~~l~~l~-----~~g~~~v~pVnp~ 42 (291)
T PRK05678 7 KDTKVIVQGITGKQGTFHTEQML-----AYGTNIVGGVTPG 42 (291)
T ss_pred CCCeEEEeCCCchHHHHHHHHHH-----HCCCCEEEEECCC
Confidence 46789999999999999999999 56775 4455554
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=88.46 E-value=0.86 Score=38.90 Aligned_cols=37 Identities=30% Similarity=0.205 Sum_probs=30.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~ 49 (176)
..+++++|.|+ |-+|..+++.|. ..| .+|+.++|+..
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~-----~~G~~~V~v~~rs~~ 215 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLL-----RKGVGKILIANRTYE 215 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHH-----HCCCCEEEEEeCCHH
Confidence 34678999996 999999999999 577 67999988753
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PTZ00318 NADH dehydrogenase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=88.39 E-value=1.1 Score=38.03 Aligned_cols=38 Identities=18% Similarity=0.275 Sum_probs=30.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
+.+++|+|.| .||-|-.++++|. ..+++|+.+++++..
T Consensus 8 ~~~~~vVIvG-gG~aGl~~a~~L~-----~~~~~ItlI~~~~~~ 45 (424)
T PTZ00318 8 LKKPNVVVLG-TGWAGAYFVRNLD-----PKKYNITVISPRNHM 45 (424)
T ss_pred CCCCeEEEEC-CCHHHHHHHHHhC-----cCCCeEEEEcCCCCc
Confidence 4567899998 5899999999997 567899999877643
|
|
| >TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit | Back alignment and domain information |
|---|
Probab=88.36 E-value=1.5 Score=35.55 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=26.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEE
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG 43 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~ 43 (176)
.+.+|||-|.||.+|+.+.+.|+ ..|++++.
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~-----~~g~~~v~ 35 (286)
T TIGR01019 5 KDTKVIVQGITGSQGSFHTEQML-----AYGTNIVG 35 (286)
T ss_pred CCCcEEEecCCcHHHHHHHHHHH-----hCCCCEEE
Confidence 45689999999999999999999 67777443
|
ATP citrate lyases appear to form an outgroup. |
| >PRK11728 hydroxyglutarate oxidase; Provisional | Back alignment and domain information |
|---|
Probab=88.27 E-value=0.81 Score=38.33 Aligned_cols=33 Identities=30% Similarity=0.296 Sum_probs=28.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCC--CcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~ 48 (176)
..|+|.|| |.+|..++.+|. .. |++|+.+.|..
T Consensus 3 ~dVvIIGg-Gi~G~s~A~~La-----~~~~g~~V~llE~~~ 37 (393)
T PRK11728 3 YDFVIIGG-GIVGLSTAMQLQ-----ERYPGARIAVLEKES 37 (393)
T ss_pred ccEEEECC-cHHHHHHHHHHH-----HhCCCCeEEEEeCCC
Confidence 46899995 899999999999 56 99999999874
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=88.19 E-value=0.88 Score=36.40 Aligned_cols=36 Identities=33% Similarity=0.399 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+++|+|++|-+|..+++.+. ..|.+|+++++++
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~-----~~g~~v~~~~~~~ 177 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAK-----AAGATVVGAAGGP 177 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 35689999999999999988888 6899999988764
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=88.03 E-value=0.92 Score=38.93 Aligned_cols=37 Identities=24% Similarity=0.267 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+++++|+|. |.||+.+++.|. ..|.+|++.++++..
T Consensus 211 ~Gk~VlViG~-G~IG~~vA~~lr-----~~Ga~ViV~d~dp~r 247 (425)
T PRK05476 211 AGKVVVVAGY-GDVGKGCAQRLR-----GLGARVIVTEVDPIC 247 (425)
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEcCCchh
Confidence 5789999995 899999999999 789999999887644
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=88.01 E-value=0.32 Score=37.93 Aligned_cols=38 Identities=24% Similarity=0.246 Sum_probs=28.1
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecC
Q 030483 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARR 47 (176)
Q Consensus 4 ~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~ 47 (176)
|+...+.+|+|.|+.| +|+++++.|. ..|. +++.++..
T Consensus 16 q~~L~~~~VlivG~Gg-lGs~va~~La-----~~Gvg~i~lvD~D 54 (228)
T cd00757 16 QEKLKNARVLVVGAGG-LGSPAAEYLA-----AAGVGKLGLVDDD 54 (228)
T ss_pred HHHHhCCcEEEECCCH-HHHHHHHHHH-----HcCCCEEEEEcCC
Confidence 3334567999999655 9999999999 6777 46666543
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=88.01 E-value=0.9 Score=41.22 Aligned_cols=34 Identities=29% Similarity=0.282 Sum_probs=30.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++|.|.| .|.+|+.+++.|. ..|++|++++|+.
T Consensus 52 ~~kIgIIG-~G~mG~slA~~L~-----~~G~~V~~~dr~~ 85 (667)
T PLN02712 52 QLKIAIIG-FGNYGQFLAKTLI-----SQGHTVLAHSRSD 85 (667)
T ss_pred CCEEEEEc-cCHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 46899999 7999999999999 6889999999863
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=88.01 E-value=0.74 Score=37.37 Aligned_cols=33 Identities=24% Similarity=0.207 Sum_probs=30.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA 44 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l 44 (176)
..++++.|.|.||.+|.-++..|+ .+|+.|+..
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~-----~~gatVtv~ 188 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLL-----DKNATVTLT 188 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHH-----HCCCEEEEE
Confidence 467999999999999999999999 689999887
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=87.95 E-value=0.87 Score=33.29 Aligned_cols=32 Identities=28% Similarity=0.252 Sum_probs=28.0
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
||.|.| +|--|.+++..|. .+|++|+.+.|++
T Consensus 1 KI~ViG-aG~~G~AlA~~la-----~~g~~V~l~~~~~ 32 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLA-----DNGHEVTLWGRDE 32 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHH-----HCTEEEEEETSCH
T ss_pred CEEEEC-cCHHHHHHHHHHH-----HcCCEEEEEeccH
Confidence 578888 4778999999999 7999999999975
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK09126 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=87.84 E-value=0.92 Score=37.73 Aligned_cols=37 Identities=38% Similarity=0.488 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
||+..|+|.|| |-.|..++..|. ..|++|+.+.|.+.
T Consensus 1 ~~~~dviIvGg-G~aGl~~A~~L~-----~~G~~v~v~E~~~~ 37 (392)
T PRK09126 1 MMHSDIVVVGA-GPAGLSFARSLA-----GSGLKVTLIERQPL 37 (392)
T ss_pred CCcccEEEECc-CHHHHHHHHHHH-----hCCCcEEEEeCCCc
Confidence 45567999994 899999999999 68999999998764
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=87.80 E-value=0.73 Score=31.42 Aligned_cols=32 Identities=38% Similarity=0.462 Sum_probs=26.1
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|.|. |-+|..+++.|. +.+++|+.+++++.
T Consensus 1 vvI~G~-g~~~~~i~~~L~-----~~~~~vvvid~d~~ 32 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLK-----EGGIDVVVIDRDPE 32 (116)
T ss_dssp EEEES--SHHHHHHHHHHH-----HTTSEEEEEESSHH
T ss_pred eEEEcC-CHHHHHHHHHHH-----hCCCEEEEEECCcH
Confidence 578886 579999999999 67779999998753
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=87.73 E-value=0.91 Score=32.51 Aligned_cols=31 Identities=35% Similarity=0.413 Sum_probs=27.1
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|.|+ |-||..++.+|. ..|++|..++|+.
T Consensus 1 I~I~G~-GaiG~~~a~~L~-----~~g~~V~l~~r~~ 31 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLA-----QAGHDVTLVSRSP 31 (151)
T ss_dssp EEEEST-SHHHHHHHHHHH-----HTTCEEEEEESHH
T ss_pred CEEECc-CHHHHHHHHHHH-----HCCCceEEEEccc
Confidence 578885 559999999999 6999999999987
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=87.69 E-value=1 Score=39.52 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=30.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.|+ |..|+.++..|+ ..|++|+..+|++.
T Consensus 8 ~~V~VIGa-G~MG~gIA~~la-----~aG~~V~l~D~~~e 41 (507)
T PRK08268 8 ATVAVIGA-GAMGAGIAQVAA-----QAGHTVLLYDARAG 41 (507)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEeCCHH
Confidence 67999986 999999999999 68999999998764
|
|
| >PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated | Back alignment and domain information |
|---|
Probab=87.69 E-value=1.4 Score=36.85 Aligned_cols=36 Identities=31% Similarity=0.398 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+...|+|.| .|-.|..++-.|. ..|++|..+.|.+.
T Consensus 5 ~~~dV~IvG-aG~aGl~~A~~La-----~~G~~v~liE~~~~ 40 (392)
T PRK08773 5 SRRDAVIVG-GGVVGAACALALA-----DAGLSVALVEGREP 40 (392)
T ss_pred CCCCEEEEC-cCHHHHHHHHHHh-----cCCCEEEEEeCCCC
Confidence 345799988 5999999999998 79999999999764
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=87.66 E-value=0.96 Score=29.77 Aligned_cols=33 Identities=33% Similarity=0.285 Sum_probs=26.5
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCC---cEEEEE-ecCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSP---WKVYGA-ARRPP 49 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g---~~V~~l-~R~~~ 49 (176)
||.|. |+|-+|.+|++.|+ ..| .+|+.. +|++.
T Consensus 1 kI~iI-G~G~mg~al~~~l~-----~~g~~~~~v~~~~~r~~~ 37 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLL-----ASGIKPHEVIIVSSRSPE 37 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHH-----HTTS-GGEEEEEEESSHH
T ss_pred CEEEE-CCCHHHHHHHHHHH-----HCCCCceeEEeeccCcHH
Confidence 46677 68999999999999 688 889855 77654
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=87.63 E-value=0.87 Score=36.81 Aligned_cols=35 Identities=34% Similarity=0.380 Sum_probs=30.1
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCC-CcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~ 48 (176)
+.++||+|++|.+|..+++.+. .. |.+|+++++++
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak-----~~~G~~vi~~~~~~ 184 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLAR-----QLTGLTVIATASRP 184 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-----HhCCCEEEEEcCcH
Confidence 5699999999999999988777 55 89999988765
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
| >cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Probab=87.63 E-value=1.1 Score=35.29 Aligned_cols=36 Identities=22% Similarity=0.190 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+++|.|++|.+|..+++.+. ..|.+|+.++++.
T Consensus 144 ~~~~vlv~g~~g~~g~~~~~~a~-----~~g~~v~~~~~~~ 179 (309)
T cd05289 144 AGQTVLIHGAAGGVGSFAVQLAK-----ARGARVIATASAA 179 (309)
T ss_pred CCCEEEEecCCchHHHHHHHHHH-----HcCCEEEEEecch
Confidence 45789999999999999999888 6899998887654
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et |
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.60 E-value=1.4 Score=35.30 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=29.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEE-EEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVY-GAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~-~l~R~~~ 49 (176)
.++|.|.|++|-.|+.|++.+.+ ..+.++. +++|.+.
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~----~~~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLE----APDLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhc----CCCceEEEEEecCCc
Confidence 46899999999999999999995 5667744 4667654
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=87.58 E-value=1 Score=36.77 Aligned_cols=68 Identities=16% Similarity=0.136 Sum_probs=47.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCCC------C------C--------------CCcc---
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW------F------P--------------TALV--- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~~------~------~--------------~~~v--- 58 (176)
|+|.|.|+ |.+|..++..|+ ..| .+|..++++..... . . .+.+
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~-----~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~~l~~aDiViit 74 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALL-----LRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKGADVVVIT 74 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----HcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHHHhCCCCEEEEc
Confidence 37999997 999999999999 577 57999998753210 0 0 0011
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+....+..|+...+.+++.+.+.
T Consensus 75 a~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~ 106 (308)
T cd05292 75 AGANQKPGETRLDLLKRNVAIFKEIIPQILKY 106 (308)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1234456778888888888888776
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=87.58 E-value=1 Score=35.83 Aligned_cols=36 Identities=31% Similarity=0.323 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||.|++|-+|..+++.+. ..|.+|+++++++
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~-----~~g~~v~~~~~~~ 177 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAK-----ALGATVTATTRSP 177 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 35789999999999999999888 6899999888764
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=87.57 E-value=1.1 Score=37.40 Aligned_cols=34 Identities=32% Similarity=0.216 Sum_probs=29.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|+|.|+ |.+|+-++.++. +.|++|++++..+.
T Consensus 3 ~~igilG~-Gql~~ml~~aa~-----~lG~~v~~~d~~~~ 36 (372)
T PRK06019 3 KTIGIIGG-GQLGRMLALAAA-----PLGYKVIVLDPDPD 36 (372)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----HcCCEEEEEeCCCC
Confidence 58999997 799999999999 69999999987643
|
|
| >PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed | Back alignment and domain information |
|---|
Probab=87.45 E-value=1 Score=38.68 Aligned_cols=35 Identities=26% Similarity=0.198 Sum_probs=29.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++.|+|.| .|.+|..++-+|. ..|++|..+.+++.
T Consensus 2 ~~dVvVIG-GGlAGleAAlaLA-----r~Gl~V~LiE~rp~ 36 (436)
T PRK05335 2 MKPVNVIG-AGLAGSEAAWQLA-----KRGVPVELYEMRPV 36 (436)
T ss_pred CCcEEEEC-CCHHHHHHHHHHH-----hCCCcEEEEEccCc
Confidence 35788988 5899999999999 69999999986543
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=87.44 E-value=0.67 Score=37.29 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=28.4
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+|.|.| .|.+|+.+++.|+ ..|++|++++|++.
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~-----~~G~~V~~~dr~~~ 33 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLA-----KAGYQLHVTTIGPE 33 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHH-----HCCCeEEEEcCCHH
Confidence 366776 7999999999999 68999999998753
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase | Back alignment and domain information |
|---|
Probab=87.43 E-value=1 Score=38.10 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=27.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
|++.|.|+||-||...++-+.+ +.+.++|.+++=
T Consensus 2 k~i~IlGsTGSIG~qtL~Vi~~---~~~~f~v~~Laa 35 (389)
T TIGR00243 2 KQIVILGSTGSIGKSTLDVVRH---NPDHFQVVALSA 35 (389)
T ss_pred ceEEEEecChHHHHHHHHHHHh---CccccEEEEEEc
Confidence 6899999999999998887653 136699999863
|
1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis. |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=87.19 E-value=1.1 Score=36.54 Aligned_cols=37 Identities=24% Similarity=0.169 Sum_probs=29.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..++|+|.|+ |-+|..+++.|.. ..+.+|+.++|++.
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~----~g~~~V~v~~r~~~ 213 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAA----KGVAEITIANRTYE 213 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHH----cCCCEEEEEeCCHH
Confidence 4678999986 9999999999983 24467888888754
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=87.16 E-value=0.98 Score=36.18 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||.|++|-+|..+++.+. ..|.+|+.++++.
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~-----~~G~~v~~~~~~~ 174 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAA-----ARGINVINLVRRD 174 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHH-----HCCCeEEEEecCH
Confidence 45789999999999999999888 7899998887754
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=87.11 E-value=1.7 Score=35.61 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++.|.| .|-||+.+++.|. .-|++|++++|...
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~-----afG~~V~~~~~~~~ 170 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQ-----TWGFPLRCWSRSRK 170 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEeCCCC
Confidence 568899988 7999999999999 79999999998654
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=87.02 E-value=0.71 Score=35.72 Aligned_cols=30 Identities=23% Similarity=0.155 Sum_probs=26.2
Q ss_pred cCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 16 GVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 16 Gat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
|++ +-||++++++|+ +.|++|+..+|+...
T Consensus 1 g~~~s~GiG~aia~~l~-----~~Ga~V~~~~~~~~~ 32 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALA-----EEGANVILTDRNEEK 32 (241)
T ss_dssp STSSTSHHHHHHHHHHH-----HTTEEEEEEESSHHH
T ss_pred CCCCCCChHHHHHHHHH-----HCCCEEEEEeCChHH
Confidence 566 889999999999 799999999998653
|
... |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=86.99 E-value=0.98 Score=32.00 Aligned_cols=35 Identities=29% Similarity=0.263 Sum_probs=26.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~ 49 (176)
+++|+|.|+.| +|+.+++.|. ..|. +++.++...-
T Consensus 2 ~~~v~iiG~G~-vGs~va~~L~-----~~Gv~~i~lvD~d~v 37 (135)
T PF00899_consen 2 NKRVLIIGAGG-VGSEVAKNLA-----RSGVGKITLVDDDIV 37 (135)
T ss_dssp T-EEEEESTSH-HHHHHHHHHH-----HHTTSEEEEEESSBB
T ss_pred CCEEEEECcCH-HHHHHHHHHH-----HhCCCceeecCCcce
Confidence 46899999655 9999999999 5787 5777776543
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK06545 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=86.94 E-value=0.95 Score=37.77 Aligned_cols=34 Identities=35% Similarity=0.446 Sum_probs=28.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.| .|.+|..++..|. ..|++|..+++++.
T Consensus 1 ~~I~iIG-~GliG~siA~~L~-----~~G~~v~i~~~~~~ 34 (359)
T PRK06545 1 RTVLIVG-LGLIGGSLALAIK-----AAGPDVFIIGYDPS 34 (359)
T ss_pred CeEEEEE-eCHHHHHHHHHHH-----hcCCCeEEEEeCCC
Confidence 3678886 7999999999999 68999888887654
|
|
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=86.94 E-value=1.2 Score=36.10 Aligned_cols=36 Identities=22% Similarity=0.219 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||.|++|-+|..+++.+. ..|++|++++++.
T Consensus 177 ~g~~vlI~g~~g~ig~~~~~~a~-----~~g~~vi~~~~~~ 212 (350)
T cd08274 177 AGETVLVTGASGGVGSALVQLAK-----RRGAIVIAVAGAA 212 (350)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-----hcCCEEEEEeCch
Confidence 35799999999999999988888 6899998887653
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=86.84 E-value=1.3 Score=36.17 Aligned_cols=36 Identities=22% Similarity=0.138 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++.|.| .|-||+.+++.|. .-|.+|++++|+..
T Consensus 121 ~gktvgIiG-~G~IG~~vA~~l~-----afG~~V~~~~r~~~ 156 (303)
T PRK06436 121 YNKSLGILG-YGGIGRRVALLAK-----AFGMNIYAYTRSYV 156 (303)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHH-----HCCCEEEEECCCCc
Confidence 578999998 6999999999887 68999999998643
|
|
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=86.80 E-value=1.1 Score=35.43 Aligned_cols=36 Identities=28% Similarity=0.383 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+++|+|++|-+|..+++.+. ..|++|+.++++.
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~-----~~g~~v~~~~~~~ 174 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAK-----ALGARVIAAASSE 174 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-----HhCCEEEEEeCCH
Confidence 35789999999999999999888 7899999888764
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=86.76 E-value=1.3 Score=37.57 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=27.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
|+|.|.|+||-||..-++.+.+ ..+.++|.+++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~---~p~~f~VvaLa 34 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRR---NPDRFRVVALS 34 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHh---CccccEEEEEE
Confidence 6899999999999999988863 14578999987
|
|
| >KOG1496 consensus Malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=86.74 E-value=0.58 Score=37.24 Aligned_cols=21 Identities=29% Similarity=0.411 Sum_probs=19.6
Q ss_pred CeEEEEcCChHHHHHHHHHhh
Q 030483 10 SVALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~ 30 (176)
-+||||||+|.||.+|+-.+.
T Consensus 5 irVlVtGAAGqI~ysll~~ia 25 (332)
T KOG1496|consen 5 IRVLVTGAAGQIGYSLLPMIA 25 (332)
T ss_pred eEEEeecccchhhHHHHHHHc
Confidence 389999999999999999987
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=86.71 E-value=1.4 Score=36.69 Aligned_cols=37 Identities=16% Similarity=0.069 Sum_probs=27.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..++.|||.||+|-+|+++++-+. ..+..++..+++.
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk-----~~~~~~v~t~~s~ 192 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAK-----HAGAIKVVTACSK 192 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHH-----hcCCcEEEEEccc
Confidence 356799999999999999999998 5774444444443
|
|
| >PRK08163 salicylate hydroxylase; Provisional | Back alignment and domain information |
|---|
Probab=86.71 E-value=1.2 Score=37.04 Aligned_cols=35 Identities=34% Similarity=0.356 Sum_probs=30.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++|+|.| .|-.|..++..|. ..|++|+.+.|++.
T Consensus 4 ~~~V~IvG-aGiaGl~~A~~L~-----~~g~~v~v~Er~~~ 38 (396)
T PRK08163 4 VTPVLIVG-GGIGGLAAALALA-----RQGIKVKLLEQAAE 38 (396)
T ss_pred CCeEEEEC-CcHHHHHHHHHHH-----hCCCcEEEEeeCcc
Confidence 46899999 5899999999998 69999999998764
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.69 E-value=0.36 Score=38.16 Aligned_cols=121 Identities=14% Similarity=0.088 Sum_probs=81.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----CCC-CCc-----c---------------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WFP-TAL-----V--------------------- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~-~~~-----v--------------------- 58 (176)
.+.++.|++||.|+++|+... ..+++|-.+.|+..+. |.. +.+ +
T Consensus 53 e~tlvlggnpfsgs~vlk~A~-----~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~gg 127 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNAT-----NVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGG 127 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHH-----hhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcC
Confidence 468899999999999999999 7999999999984331 221 110 0
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHH-
Q 030483 59 QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE- 137 (176)
Q Consensus 59 ~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~- 137 (176)
..+...+.++|-+...+.++++.+. ++++|+|+|. ..||- .|+ . +.-|+.
T Consensus 128 fgn~~~m~~ing~ani~a~kaa~~~-----gv~~fvyISa-~d~~~---------------~~~---i-----~rGY~~g 178 (283)
T KOG4288|consen 128 FGNIILMDRINGTANINAVKAAAKA-----GVPRFVYISA-HDFGL---------------PPL---I-----PRGYIEG 178 (283)
T ss_pred ccchHHHHHhccHhhHHHHHHHHHc-----CCceEEEEEh-hhcCC---------------CCc---c-----chhhhcc
Confidence 2334455678888877888888887 7899999974 22221 111 1 122332
Q ss_pred ---HHHHHHhhCCCceEEEeccCceEeCCCC
Q 030483 138 ---LEDVSASYSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 138 ---~e~~~~~~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.|..+. ...+++-+|+||+.+||-+.-
T Consensus 179 KR~AE~Ell-~~~~~rgiilRPGFiyg~R~v 208 (283)
T KOG4288|consen 179 KREAEAELL-KKFRFRGIILRPGFIYGTRNV 208 (283)
T ss_pred chHHHHHHH-HhcCCCceeeccceeeccccc
Confidence 232222 345688899999999999763
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=86.69 E-value=1.2 Score=35.67 Aligned_cols=37 Identities=19% Similarity=0.162 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+.++||.|++|.+|..+++.+. ..|.+|+.++++..
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~-----~~g~~v~~~~~~~~ 174 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAK-----LLGFKTINVVRRDE 174 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHH-----HCCCeEEEEecChH
Confidence 35689999999999999999888 78999988887653
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=86.64 E-value=1.2 Score=38.80 Aligned_cols=35 Identities=20% Similarity=0.149 Sum_probs=31.4
Q ss_pred CCCCCeEEEEcC----------------ChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 6 QNPKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 6 ~~~~~~vLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
+..+++||||+| ||-.|.+|++++. ..|++|+.++
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~-----~~GA~VtlI~ 303 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAA-----AAGAEVTLIS 303 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHH-----HCCCcEEEEe
Confidence 357889999987 8999999999999 7999999886
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 176 | ||||
| 2v6f_A | 364 | Structure Of Progesterone 5beta-Reductase From Digi | 7e-23 |
| >pdb|2V6F|A Chain A, Structure Of Progesterone 5beta-Reductase From Digitalis Lanata Length = 364 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 176 | |||
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 8e-33 |
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 119 bits (298), Expect = 8e-33
Identities = 72/195 (36%), Positives = 95/195 (48%), Gaps = 42/195 (21%)
Query: 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALV----------- 58
SVALI+GVTGI G SLAE L TPG PWKVYG ARR P W +
Sbjct: 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPD 61
Query: 59 ----------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALL 96
+ +E+ N NS M +NVL ++ + L+H++L
Sbjct: 62 DSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCP---NLKHISLQ 118
Query: 97 TGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV---SASYSPAITYSV 153
TG KHYMGP G++ ++ P+ ED RL + NFYY+LED+ +T+SV
Sbjct: 119 TGRKHYMGPFESY---GKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSV 175
Query: 154 HRSSVIIGASPRSLY 168
HR I G SP S+
Sbjct: 176 HRPGNIFGFSPYSMM 190
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 176 | |||
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.89 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.88 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.88 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.88 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.88 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.88 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.88 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.87 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.87 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.87 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.87 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.86 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.86 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.86 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.85 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.85 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.85 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.85 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.85 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.84 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.84 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.84 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.84 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.84 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.84 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.84 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.84 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.83 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.83 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.83 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.83 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.83 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.83 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.82 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.82 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.82 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.82 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.82 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.82 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.82 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.82 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.82 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.81 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.81 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.81 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.81 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.8 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.8 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.8 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.8 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.8 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.8 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.79 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.79 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.79 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.79 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.79 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.78 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.78 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.77 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.77 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.77 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.76 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.76 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.76 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.76 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.75 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.75 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.75 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.71 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.7 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.7 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.69 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.67 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.66 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.65 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.63 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.62 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.59 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.59 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.58 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.56 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.54 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.47 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.44 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.43 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.43 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.42 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.42 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.39 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.39 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.38 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.38 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.38 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.37 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.37 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.36 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.36 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.36 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.36 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.35 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.35 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.34 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.34 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.34 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.34 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.34 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.33 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.33 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.33 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.32 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.32 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.32 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.31 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.31 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.31 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.3 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.3 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.3 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.3 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.3 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.3 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.29 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.29 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.29 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.29 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.29 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.29 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.28 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.28 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.28 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.28 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.28 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.27 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.27 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.27 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.26 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.26 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.26 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.26 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.26 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.26 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.26 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.26 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.26 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.25 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.25 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.25 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.25 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.24 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.24 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.24 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.24 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.24 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.24 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.23 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.23 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.23 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.23 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.22 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.22 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.22 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.22 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.22 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.22 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.22 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.21 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.21 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.21 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.21 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.21 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.21 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.21 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.2 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.2 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.2 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.2 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.2 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.2 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.2 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.2 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.19 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.19 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.19 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.19 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.19 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.19 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.18 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.18 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.18 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.18 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.17 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.17 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.17 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.17 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.17 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.16 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.16 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.16 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.16 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.16 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.16 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.16 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.15 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.15 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.15 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.15 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.15 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.14 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.14 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.14 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.14 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.14 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.14 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.14 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.14 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.13 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.13 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.13 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.13 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.13 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.13 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.13 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.13 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.12 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.12 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.12 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.12 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.11 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.1 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.1 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.1 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.1 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.1 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.09 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.09 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.09 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.08 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.08 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.08 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.08 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.07 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.07 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.07 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.06 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.06 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.05 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.05 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.04 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.04 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.04 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.04 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.03 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.03 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.03 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.03 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.02 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.02 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.02 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.02 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.02 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.02 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.02 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.01 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.01 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.0 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 98.99 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 98.98 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.98 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.97 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 98.97 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.97 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.96 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 98.96 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 98.96 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.95 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 98.95 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.95 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.93 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 98.92 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.91 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 98.9 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 98.88 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 98.88 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 98.86 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 98.84 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 98.83 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.77 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 98.77 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.71 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.7 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 98.69 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.68 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 98.67 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.61 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.57 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.57 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.56 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.54 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.49 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.41 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.39 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 98.16 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.05 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.03 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 97.95 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.89 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.89 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.88 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 97.83 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 97.82 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.76 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 97.63 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.56 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.52 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.51 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.42 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.3 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.29 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.26 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.25 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.16 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 97.03 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 97.03 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 96.94 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 96.91 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 96.9 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 96.85 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 96.84 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 96.84 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 96.76 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 96.61 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 96.55 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 96.54 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 96.54 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 96.43 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 96.4 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 96.39 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 96.38 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 96.29 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 96.28 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 96.27 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 96.24 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 96.19 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 96.16 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 96.11 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 96.05 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 96.02 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 96.02 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 96.01 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 95.98 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 95.96 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 95.95 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 95.94 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 95.92 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 95.85 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 95.81 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 95.77 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 95.69 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 95.6 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 95.57 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 95.55 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 95.54 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 95.5 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 95.4 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 95.38 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 95.37 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 95.37 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 95.36 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 95.3 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 95.27 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 95.26 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 95.26 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 95.2 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 95.1 | |
| 1evy_A | 366 | Glycerol-3-phosphate dehydrogenase; rossmann fold, | 95.07 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 95.07 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 95.06 | |
| 1ks9_A | 291 | KPA reductase;, 2-dehydropantoate 2-reductase; PAN | 95.05 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 95.04 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 95.01 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 95.01 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 94.91 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 94.89 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 94.84 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 94.83 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 94.8 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 94.79 | |
| 3i83_A | 320 | 2-dehydropantoate 2-reductase; structural genomics | 94.75 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 94.7 | |
| 2o3j_A | 481 | UDP-glucose 6-dehydrogenase; structural genomics, | 94.67 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 94.65 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 94.64 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 94.61 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 94.58 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 94.48 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 94.45 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 94.39 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 94.39 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 94.38 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 94.37 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 94.37 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 94.36 | |
| 3ghy_A | 335 | Ketopantoate reductase protein; oxidoreductase, NA | 94.35 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 94.27 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 94.24 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 94.22 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 94.21 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 94.17 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 94.17 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 94.16 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 94.11 | |
| 1x0v_A | 354 | GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase | 94.11 | |
| 2rcy_A | 262 | Pyrroline carboxylate reductase; malaria, structur | 94.1 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 94.09 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 94.09 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 93.98 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 93.98 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 93.95 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 93.93 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 93.91 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 93.9 | |
| 3g17_A | 294 | Similar to 2-dehydropantoate 2-reductase; structur | 93.89 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 93.88 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 93.84 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 93.82 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 93.82 | |
| 3hn2_A | 312 | 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str | 93.81 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 93.81 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 93.73 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 93.66 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 93.53 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 93.5 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 93.49 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 93.49 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 93.4 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 93.34 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 93.34 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 93.29 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 93.28 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 93.28 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 93.24 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 93.24 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 93.22 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 93.19 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 93.16 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 93.14 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 93.12 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 93.12 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 93.11 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 93.02 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 93.02 | |
| 2xdo_A | 398 | TETX2 protein; tetracycline degradation, tigecycli | 93.01 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 92.96 | |
| 3e5r_O | 337 | PP38, glyceraldehyde-3-phosphate dehydrogenase, cy | 92.94 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 92.92 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 92.9 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 92.89 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 92.89 | |
| 2dzd_A | 461 | Pyruvate carboxylase; biotin carboxylase, ligase; | 92.87 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 92.85 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 92.82 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 92.79 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 92.78 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 92.78 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 92.74 | |
| 3b1f_A | 290 | Putative prephenate dehydrogenase; enzyme, 4-hydro | 92.69 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 92.67 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 92.67 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 92.55 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 92.5 | |
| 2izz_A | 322 | Pyrroline-5-carboxylate reductase 1; amino-acid bi | 92.47 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 92.46 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 92.44 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 92.4 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 92.39 | |
| 3c7a_A | 404 | Octopine dehydrogenase; L) stereospecific opine de | 92.36 | |
| 3ego_A | 307 | Probable 2-dehydropantoate 2-reductase; structural | 92.34 | |
| 3ado_A | 319 | Lambda-crystallin; L-gulonate 3-dehydrogenase, str | 92.33 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 92.25 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 92.25 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 92.25 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 92.24 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 92.21 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 92.18 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 92.17 | |
| 1dlj_A | 402 | UDP-glucose dehydrogenase; rossmann fold, ternary | 92.15 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 92.15 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 92.14 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 92.14 | |
| 1z82_A | 335 | Glycerol-3-phosphate dehydrogenase; TM0378, struct | 92.13 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 92.07 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 92.05 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 92.05 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 92.04 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 92.03 | |
| 3dfu_A | 232 | Uncharacterized protein from 6-phosphogluconate de | 92.03 | |
| 2zyd_A | 480 | 6-phosphogluconate dehydrogenase, decarboxylating; | 92.01 | |
| 1zcj_A | 463 | Peroxisomal bifunctional enzyme; peroxisomal multi | 91.94 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 91.93 |
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.7e-23 Score=167.05 Aligned_cols=134 Identities=18% Similarity=0.096 Sum_probs=101.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------------CC------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------------FP------------------ 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------------~~------------------ 54 (176)
++|+|||||||||||++|+++|+ ++||+|++++|+..... ..
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 98 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLL-----KLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM 98 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence 46899999999999999999999 78999999999754210 00
Q ss_pred --CCcc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCc
Q 030483 55 --TALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 120 (176)
Q Consensus 55 --~~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~ 120 (176)
.+.| ..++.+.+++|+.++.+++++|.+. ++++||++||..+||.. ...
T Consensus 99 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~v~~SS~~vyg~~------------~~~ 161 (351)
T 3ruf_A 99 KGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-----QVQSFTYAASSSTYGDH------------PAL 161 (351)
T ss_dssp TTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGTTC------------CCS
T ss_pred cCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEecHHhcCCC------------CCC
Confidence 0111 1245567899999999999999987 57899999999999743 246
Q ss_pred cccCCCCCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 121 PFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 121 p~~E~~~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
|++|+++.. |...|.. |+++.+ ...+++++++||++||||+..
T Consensus 162 ~~~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 211 (351)
T 3ruf_A 162 PKVEENIGN--PLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQD 211 (351)
T ss_dssp SBCTTCCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCC
T ss_pred CCccCCCCC--CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCC
Confidence 889998865 3333443 343333 345899999999999999863
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-22 Score=160.07 Aligned_cols=134 Identities=23% Similarity=0.143 Sum_probs=100.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC---CC---C------CC----------Ccc------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP---GW---F------PT----------ALV------ 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~---~~---~------~~----------~~v------ 58 (176)
+++++|||||||||||++|+++|+ +.||+|++++|+... .. . .. +.|
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~d~vi~~a~~ 79 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALV-----ASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLSDVRLVYHLASH 79 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHH-----HTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHTTEEEEEECCCC
T ss_pred cCCCeEEEECCCChHHHHHHHHHH-----HCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccccCCEEEECCcc
Confidence 456899999999999999999999 689999999997651 10 0 00 111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCC
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 132 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~ 132 (176)
..++...++ |+.++.+++++|.+. ++++||++||..+|+.. ...|++|+++.. |
T Consensus 80 ~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-----~v~~~v~~SS~~v~~~~------------~~~~~~E~~~~~--p 139 (321)
T 3vps_A 80 KSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-----GVPKVVVGSTCEVYGQA------------DTLPTPEDSPLS--P 139 (321)
T ss_dssp CCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSC------------SSSSBCTTSCCC--C
T ss_pred CChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-----CCCeEEEecCHHHhCCC------------CCCCCCCCCCCC--C
Confidence 233445667 999999999999998 58899999999999843 246889998765 3
Q ss_pred cchHHH-----HHHHHh--hCCCc-eEEEeccCceEeCCCC
Q 030483 133 NFYYEL-----EDVSAS--YSPAI-TYSVHRSSVIIGASPR 165 (176)
Q Consensus 133 ~~y~~~-----e~~~~~--~~~g~-~~~ivRp~~v~G~~~~ 165 (176)
...|.. |+++.+ ...++ +++++||++||||+..
T Consensus 140 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~ 180 (321)
T 3vps_A 140 RSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGER 180 (321)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCC
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCC
Confidence 333433 444443 45788 9999999999999864
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-22 Score=160.80 Aligned_cols=134 Identities=14% Similarity=0.208 Sum_probs=100.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC------------C--------CCCcc--------c
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------------F--------PTALV--------Q 59 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------------~--------~~~~v--------~ 59 (176)
|+|+|||||||||||++|+++|+ ++|++|++++|++.... . +.+.| .
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~~~~ 75 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIK-----NDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLNDVDAVVHLAATRGS 75 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCCC-----CCEEEECCCCHHHHHHHTTTCSEEEECCCCCCS
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----hCCCEEEEEeCCCCcccCCceEEEEccccHHHHHHhhcCCCEEEEccccCCC
Confidence 45799999999999999999999 68999999999833211 0 01111 1
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHH-
Q 030483 60 ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL- 138 (176)
Q Consensus 60 ~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~- 138 (176)
.++.+.+++|+.++.+++++|++. ++++||++||..+||... ..|++|+++.. |...|..
T Consensus 76 ~~~~~~~~~n~~~~~~ll~a~~~~-----~~~r~v~~SS~~vyg~~~------------~~~~~E~~~~~--p~~~Y~~s 136 (311)
T 3m2p_A 76 QGKISEFHDNEILTQNLYDACYEN-----NISNIVYASTISAYSDET------------SLPWNEKELPL--PDLMYGVS 136 (311)
T ss_dssp SSCGGGTHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGCCCGG------------GCSBCTTSCCC--CSSHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEccHHHhCCCC------------CCCCCCCCCCC--CCchhHHH
Confidence 255678899999999999999987 578999999999998431 46889998765 3333433
Q ss_pred ----HHHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 139 ----EDVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 139 ----e~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
|+++.+ ...+++++++||++||||...
T Consensus 137 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 169 (311)
T 3m2p_A 137 KLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEK 169 (311)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEEEECEEECSCC-
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCC
Confidence 444433 347999999999999999874
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.3e-22 Score=157.94 Aligned_cols=133 Identities=19% Similarity=0.189 Sum_probs=97.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-----------CCCCcc--------------cC--cH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FPTALV--------------QE--SE 62 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~~~~v--------------~~--~~ 62 (176)
|||||||||||||++|+++|+ ++||+|++++|++.... ...+.+ +. ..
T Consensus 1 MkILVTGatGfIG~~L~~~L~-----~~G~~V~~l~R~~~~~~~~~~~~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~ 75 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLN-----ARGHEVTLVSRKPGPGRITWDELAASGLPSCDAAVNLAGENILNPLRRWNETFQ 75 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCCTTEEEHHHHHHHCCCSCSEEEECCCCCSSCTTSCCCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCCCcCeeecchhhHhhccCCCEEEEeccCcccchhhhhhhhhh
Confidence 589999999999999999999 79999999999875421 111111 11 12
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHH
Q 030483 63 EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVS 142 (176)
Q Consensus 63 ~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~ 142 (176)
.+..+.|+.+|.++++++... ..+.+.++++||+.+||.. ...+++|++|.. +..++...+..
T Consensus 76 ~~~~~~~v~~t~~l~~~~~~~---~~~~~~~i~~Ss~~vyg~~------------~~~~~~E~~p~~--~~~~~~~~~~~ 138 (298)
T 4b4o_A 76 KEVLGSRLETTQLLAKAITKA---PQPPKAWVLVTGVAYYQPS------------LTAEYDEDSPGG--DFDFFSNLVTK 138 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC---SSCCSEEEEEEEGGGSCCC------------SSCCBCTTCCCS--CSSHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHHh---CCCceEEEEEeeeeeecCC------------CCCcccccCCcc--ccchhHHHHHH
Confidence 456789999999999999987 4456678899999999843 246788988754 33333322111
Q ss_pred --Hh---hCCCceEEEeccCceEeCCC
Q 030483 143 --AS---YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 143 --~~---~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+ ...+++++++||++||||+.
T Consensus 139 ~e~~~~~~~~~~~~~~~r~~~v~g~~~ 165 (298)
T 4b4o_A 139 WEAAARLPGDSTRQVVVRSGVVLGRGG 165 (298)
T ss_dssp HHHHHCCSSSSSEEEEEEECEEECTTS
T ss_pred HHHHHHhhccCCceeeeeeeeEEcCCC
Confidence 11 46789999999999999975
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.9e-22 Score=158.71 Aligned_cols=134 Identities=15% Similarity=0.165 Sum_probs=101.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-----------CCCcc------------cCcHHH
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-----------PTALV------------QESEEV 64 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-----------~~~~v------------~~~~~~ 64 (176)
|+|+|||||||||||++|+++|+ ++||+|++++|...+... ..+.| ..++.+
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~ 78 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELN-----PEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDL 78 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSC-----TTTEEEEEECTTTSCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHH
T ss_pred ceeEEEEECCCCHHHHHHHHHHH-----hCCCEEEEecccccCCCCHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHH
Confidence 45689999999999999999999 689999999997655321 01221 246678
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh
Q 030483 65 NIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS 144 (176)
Q Consensus 65 ~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~ 144 (176)
.+++|+.++.+++++|++. ++ +|+++||..+|+.. ...|++|+++.. |...|...|...|
T Consensus 79 ~~~~n~~~~~~l~~~~~~~-----~~-~~v~~SS~~vy~~~------------~~~~~~E~~~~~--p~~~Y~~sK~~~E 138 (287)
T 3sc6_A 79 AYVINAIGARNVAVASQLV-----GA-KLVYISTDYVFQGD------------RPEGYDEFHNPA--PINIYGASKYAGE 138 (287)
T ss_dssp HHHHHTHHHHHHHHHHHHH-----TC-EEEEEEEGGGSCCC------------CSSCBCTTSCCC--CCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHc-----CC-eEEEEchhhhcCCC------------CCCCCCCCCCCC--CCCHHHHHHHHHH
Confidence 8999999999999999987 45 69999999999743 246899998865 3444554444433
Q ss_pred ---hCCCceEEEeccCceEeCCCCC
Q 030483 145 ---YSPAITYSVHRSSVIIGASPRS 166 (176)
Q Consensus 145 ---~~~g~~~~ivRp~~v~G~~~~~ 166 (176)
+..+.+++++||++||||...+
T Consensus 139 ~~~~~~~~~~~ilR~~~v~G~~~~~ 163 (287)
T 3sc6_A 139 QFVKELHNKYFIVRTSWLYGKYGNN 163 (287)
T ss_dssp HHHHHHCSSEEEEEECSEECSSSCC
T ss_pred HHHHHhCCCcEEEeeeeecCCCCCc
Confidence 2334588999999999997644
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=159.47 Aligned_cols=143 Identities=43% Similarity=0.688 Sum_probs=108.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCC-----cEEEEEecCCCCCC---CC-----------------------CCc
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP-----WKVYGAARRPPPGW---FP-----------------------TAL 57 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-----~~V~~l~R~~~~~~---~~-----------------------~~~ 57 (176)
+|+|||||||||||++|+++|+ ++| ++|++++|+..... .. .+.
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~-----~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~ 75 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILP-----LADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTH 75 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTT-----STTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCE
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----hCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCE
Confidence 3689999999999999999999 688 99999999754321 00 011
Q ss_pred c-------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEE-------EeccceeecccccCCCccCCCCCCCcccc
Q 030483 58 V-------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVA-------LLTGTKHYMGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 58 v-------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv-------~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~ 123 (176)
| ..++.+.+++|+.++.+++++|.+. .+++++++ ++||..+||... ....|++
T Consensus 76 vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~v~~~g~~i~~Ss~~vyg~~~----------~~~~~~~ 142 (364)
T 2v6g_A 76 VFYVTWANRSTEQENCEANSKMFRNVLDAVIPN---CPNLKHISLQTGRKHYMGPFESYGKIE----------SHDPPYT 142 (364)
T ss_dssp EEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTT---CTTCCEEEEECCTHHHHCCGGGTTTSC----------CCCSSBC
T ss_pred EEECCCCCcchHHHHHHHhHHHHHHHHHHHHHh---ccccceEEeccCceEEEechhhccccc----------cCCCCCC
Confidence 1 2346778899999999999999886 44688987 677877887321 0135889
Q ss_pred CCCCCCCCCcchHHHHHHHHh--hCCC-ceEEEeccCceEeCCCCCCCC
Q 030483 124 EDSSRLPFPNFYYELEDVSAS--YSPA-ITYSVHRSSVIIGASPRSLYX 169 (176)
Q Consensus 124 E~~~~~~~~~~y~~~e~~~~~--~~~g-~~~~ivRp~~v~G~~~~~~~~ 169 (176)
|+++..+.+..|+..|+++.+ +..+ ++++++||++||||+..+..+
T Consensus 143 E~~~~~~~~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~ 191 (364)
T 2v6g_A 143 EDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMN 191 (364)
T ss_dssp TTSCCCSSCCHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSC
T ss_pred ccccCCccchhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccc
Confidence 998766545778888988876 3456 999999999999998754433
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.4e-22 Score=162.25 Aligned_cols=131 Identities=21% Similarity=0.190 Sum_probs=96.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------C---------CCCcc----------c
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------F---------PTALV----------Q 59 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~---------~~~~v----------~ 59 (176)
.+|+|||||||||||++|+++|+ +.||+|++++|+..... . ..+.| .
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~ 92 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALR-----TQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSWAP 92 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHH-----HTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCCSSG
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----hCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCcccCcch
Confidence 46789999999999999999999 68999999999864310 0 00111 1
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHH-
Q 030483 60 ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL- 138 (176)
Q Consensus 60 ~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~- 138 (176)
....+.+++|+.++.+++++|.+. ++++||++||..+||... . ...|++|+++.. +...|..
T Consensus 93 ~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~V~~SS~~vyg~~~------~----~~~~~~E~~~~~--~~~~Y~~s 155 (347)
T 4id9_A 93 ADRDRMFAVNVEGTRRLLDAASAA-----GVRRFVFASSGEVYPENR------P----EFLPVTEDHPLC--PNSPYGLT 155 (347)
T ss_dssp GGHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGTTTTS------C----SSSSBCTTSCCC--CCSHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEECCHHHhCCCC------C----CCCCcCCCCCCC--CCChHHHH
Confidence 233678899999999999999987 678999999999998521 0 246899998764 3334443
Q ss_pred ----HHHHHh--hCCCceEEEeccCceE
Q 030483 139 ----EDVSAS--YSPAITYSVHRSSVII 160 (176)
Q Consensus 139 ----e~~~~~--~~~g~~~~ivRp~~v~ 160 (176)
|+++.+ +..+++++++||++||
T Consensus 156 K~~~E~~~~~~~~~~~~~~~ilRp~~v~ 183 (347)
T 4id9_A 156 KLLGEELVRFHQRSGAMETVILRFSHTQ 183 (347)
T ss_dssp HHHHHHHHHHHHHHSSSEEEEEEECEEE
T ss_pred HHHHHHHHHHHHHhcCCceEEEccceEe
Confidence 344433 3568999999999999
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=156.49 Aligned_cols=131 Identities=17% Similarity=0.158 Sum_probs=99.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC----C---------CC---------Ccc---------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----F---------PT---------ALV--------- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~---------~~---------~~v--------- 58 (176)
|+|||||||||||++|+++|+ ++|++|++++|...... . .+ +.|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~d~vih~A~~~~~ 75 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLV-----ELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGIKGDVVFHFAANPEV 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCCCSEEEECCSSCSS
T ss_pred CEEEEECCCChHHHHHHHHHH-----hCCCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhcCCCEEEECCCCCCc
Confidence 589999999999999999999 78999999998654310 0 00 111
Q ss_pred ---cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcch
Q 030483 59 ---QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFY 135 (176)
Q Consensus 59 ---~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y 135 (176)
..++...+++|+.++.++++++++. ++++||++||..+||.. ...|++|+++.. |...
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~vyg~~------------~~~~~~e~~~~~--p~~~ 136 (312)
T 3ko8_A 76 RLSTTEPIVHFNENVVATFNVLEWARQT-----GVRTVVFASSSTVYGDA------------DVIPTPEEEPYK--PISV 136 (312)
T ss_dssp SGGGSCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSC------------SSSSBCTTSCCC--CCSH
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeCcHHHhCCC------------CCCCCCCCCCCC--CCCh
Confidence 2345678899999999999999987 57899999999999843 246888988754 3334
Q ss_pred HHHHH-----HHHh--hCCCceEEEeccCceEeCCC
Q 030483 136 YELED-----VSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 136 ~~~e~-----~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
|...| ++.+ .+.+++++++||++||||..
T Consensus 137 Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~ 172 (312)
T 3ko8_A 137 YGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRL 172 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCC
Confidence 44433 3333 34589999999999999975
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.4e-22 Score=162.13 Aligned_cols=140 Identities=18% Similarity=0.239 Sum_probs=99.2
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCC-CcEEEEEecCCCCCC-----C---------C-C-----------C
Q 030483 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPPGW-----F---------P-T-----------A 56 (176)
Q Consensus 4 ~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~~~-----~---------~-~-----------~ 56 (176)
+..|++|+|||||||||||++|+++|+ ++ ||+|++++|+..... . . + +
T Consensus 19 ~~~m~~~~vlVtGatG~iG~~l~~~L~-----~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d 93 (372)
T 3slg_A 19 PGSMKAKKVLILGVNGFIGHHLSKRIL-----ETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCD 93 (372)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHH-----HHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCS
T ss_pred CcccCCCEEEEECCCChHHHHHHHHHH-----hCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCC
Confidence 344567899999999999999999999 56 999999999864321 0 0 0 0
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
.| ..++.+.+++|+.++.+++++|++. + ++||++||..+||... ..|++|
T Consensus 94 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~-~~~v~~SS~~vyg~~~------------~~~~~e 155 (372)
T 3slg_A 94 VILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-----G-KHLVFPSTSEVYGMCA------------DEQFDP 155 (372)
T ss_dssp EEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-----T-CEEEEECCGGGGBSCC------------CSSBCT
T ss_pred EEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-----C-CcEEEeCcHHHhCCCC------------CCCCCc
Confidence 11 1245667899999999999999998 4 7999999999998431 356777
Q ss_pred CCCCC---C--CCcchHHHH-----HHHHh-hCCCceEEEeccCceEeCCCCC
Q 030483 125 DSSRL---P--FPNFYYELE-----DVSAS-YSPAITYSVHRSSVIIGASPRS 166 (176)
Q Consensus 125 ~~~~~---~--~~~~y~~~e-----~~~~~-~~~g~~~~ivRp~~v~G~~~~~ 166 (176)
+++.. | .|...|... +++.+ ...+++++++||++||||+..+
T Consensus 156 ~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~ 208 (372)
T 3slg_A 156 DASALTYGPINKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDS 208 (372)
T ss_dssp TTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCC
T ss_pred cccccccCCCCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCccc
Confidence 76431 1 233344443 44433 2229999999999999998643
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-22 Score=159.77 Aligned_cols=132 Identities=26% Similarity=0.258 Sum_probs=95.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCC---------------------CCcc-------c
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP---------------------TALV-------Q 59 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~---------------------~~~v-------~ 59 (176)
++|+||||| +||||++|+++|+ +.|++|++++|+....... .+.| .
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~ 75 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLT-----AQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASE 75 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHH-----HTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHH
T ss_pred CCCcEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCC
Confidence 357899999 5999999999999 6899999999986432100 0111 2
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHH
Q 030483 60 ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELE 139 (176)
Q Consensus 60 ~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e 139 (176)
.++...+++|+.++.+++++|.+. ++++|+++||..+||.. ...|++|+++.. |...|...
T Consensus 76 ~~~~~~~~~n~~~~~~ll~a~~~~-----~~~~~v~~SS~~vyg~~------------~~~~~~E~~~~~--p~~~Y~~s 136 (286)
T 3gpi_A 76 YSDEHYRLSYVEGLRNTLSALEGA-----PLQHVFFVSSTGVYGQE------------VEEWLDEDTPPI--AKDFSGKR 136 (286)
T ss_dssp HC-----CCSHHHHHHHHHHTTTS-----CCCEEEEEEEGGGCCCC------------CSSEECTTSCCC--CCSHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhC-----CCCEEEEEcccEEEcCC------------CCCCCCCCCCCC--CCChhhHH
Confidence 234567788999999999999876 67899999999999843 246889998865 34445544
Q ss_pred HHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 140 DVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 140 ~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
|+..| ... ++++++||++||||...
T Consensus 137 K~~~E~~~~~-~~~~ilR~~~v~G~~~~ 163 (286)
T 3gpi_A 137 MLEAEALLAA-YSSTILRFSGIYGPGRL 163 (286)
T ss_dssp HHHHHHHGGG-SSEEEEEECEEEBTTBC
T ss_pred HHHHHHHHhc-CCeEEEecccccCCCch
Confidence 44433 223 89999999999999865
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.2e-21 Score=157.01 Aligned_cols=138 Identities=17% Similarity=0.156 Sum_probs=101.5
Q ss_pred CCcCC-CCCCCeEEEEcCChHHHHHHHHHhhCCCCCC--CCcEEEEEecCCC------------CCC---C--C------
Q 030483 1 MEKQD-QNPKSVALIIGVTGISGLSLAEALKNPTTPG--SPWKVYGAARRPP------------PGW---F--P------ 54 (176)
Q Consensus 1 ~~~~~-~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~------------~~~---~--~------ 54 (176)
|..+. .+++|+||||||+||||++|+++|+ + .|++|++++|... ... . .
T Consensus 1 M~~~~~~~~~~~vlVTGatG~IG~~l~~~L~-----~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 1 MRYIDDELENQTILITGGAGFVGSNLAFHFQ-----ENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCSSSCCCTTCEEEEETTTSHHHHHHHHHHH-----HHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred CcccchhcCCCEEEEECCCCHHHHHHHHHHH-----hhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 55544 2456899999999999999999999 7 8999999999654 100 0 0
Q ss_pred ---------------CCcc----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCC
Q 030483 55 ---------------TALV----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 109 (176)
Q Consensus 55 ---------------~~~v----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~ 109 (176)
.+.| ..++...+++|+.++.++++++++. +++ ||++||..+||..
T Consensus 76 Dl~d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----~~~-~V~~SS~~vyg~~---- 145 (362)
T 3sxp_A 76 DINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-----KAK-VIYASSAGVYGNT---- 145 (362)
T ss_dssp CTTCHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-----TCE-EEEEEEGGGGCSC----
T ss_pred CCCCHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-----CCc-EEEeCcHHHhCCC----
Confidence 0001 2456778999999999999999887 456 9999999999743
Q ss_pred CccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 110 SLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 110 ~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
..|++|+++.. |...|...|...| ....++++++||++||||+.
T Consensus 146 ---------~~~~~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~ 194 (362)
T 3sxp_A 146 ---------KAPNVVGKNES--PENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPRE 194 (362)
T ss_dssp ---------CSSBCTTSCCC--CSSHHHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTC
T ss_pred ---------CCCCCCCCCCC--CCChhHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCC
Confidence 23889998765 3344544444333 12228999999999999986
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-21 Score=158.74 Aligned_cols=133 Identities=15% Similarity=0.087 Sum_probs=97.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCCC----------CC----------------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW----------FP---------------------- 54 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~~----------~~---------------------- 54 (176)
+|+|||||||||||++|+++|+ +.| ++|++++|...... ..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~-----~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 98 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYML-----QSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERD 98 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHH-----HHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred CCeEEEECCccHHHHHHHHHHH-----hhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcC
Confidence 5789999999999999999999 677 88999988652210 00
Q ss_pred CCcc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccc
Q 030483 55 TALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 55 ~~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~ 122 (176)
.+.| ..++.+.+++|+.++.+++++|.+. ++++||++||..+|+... ...++
T Consensus 99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~v~~SS~~vy~~~~-----------~~~~~ 162 (346)
T 4egb_A 99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-----PHIKLVQVSTDEVYGSLG-----------KTGRF 162 (346)
T ss_dssp CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-----TTSEEEEEEEGGGGCCCC-----------SSCCB
T ss_pred CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeCchHHhCCCC-----------cCCCc
Confidence 0011 1244567899999999999999987 578999999999998431 24688
Q ss_pred cCCCCCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 123 KEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 123 ~E~~~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+|+++.. |...|.. |.++.+ ...+++++++||++||||+.
T Consensus 163 ~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~ 209 (346)
T 4egb_A 163 TEETPLA--PNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQ 209 (346)
T ss_dssp CTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC
T ss_pred CCCCCCC--CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCC
Confidence 9998865 3334443 333333 34589999999999999986
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.6e-21 Score=154.44 Aligned_cols=136 Identities=19% Similarity=0.188 Sum_probs=99.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC----------CC------------CCcc--------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----------FP------------TALV-------- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----------~~------------~~~v-------- 58 (176)
.++|||||||||||++|+++|+ ++|++|++++|+..... .. .+.|
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~-----~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~ 86 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLT-----EQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSS 86 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred cceEEEECCCChHHHHHHHHHH-----HCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccc
Confidence 4789999999999999999999 68999999999754310 00 0111
Q ss_pred ----cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcc
Q 030483 59 ----QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNF 134 (176)
Q Consensus 59 ----~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~ 134 (176)
..++.+.+++|+.++.+++++|.+. . ++++||++||..+||... . ...|++|+++.. +..
T Consensus 87 ~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~-~~~~iv~~SS~~v~g~~~------~----~~~~~~E~~~~~--~~~ 150 (321)
T 2pk3_A 87 VKDSWLNKKGTFSTNVFGTLHVLDAVRDS---N-LDCRILTIGSSEEYGMIL------P----EESPVSEENQLR--PMS 150 (321)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHH---T-CCCEEEEEEEGGGTBSCC------G----GGCSBCTTSCCB--CCS
T ss_pred hhhhhhcHHHHHHHHHHHHHHHHHHHHHh---C-CCCeEEEEccHHhcCCCC------C----CCCCCCCCCCCC--CCC
Confidence 2256678899999999999999765 2 478999999999997420 0 135788988754 333
Q ss_pred hHHHH-----HHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 135 YYELE-----DVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 135 y~~~e-----~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.|... .++.+ .+.+++++++||++||||+..
T Consensus 151 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~ 188 (321)
T 2pk3_A 151 PYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQS 188 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCC
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCC
Confidence 34433 33333 235899999999999999863
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=8.3e-21 Score=153.52 Aligned_cols=133 Identities=17% Similarity=0.111 Sum_probs=98.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-----------CC----------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FP---------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~---------------------- 54 (176)
++|+||||||+||||++|+++|+ +.|++|++++|+..... ..
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELL-----AHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHP 78 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSC
T ss_pred CCcEEEEecCCcHHHHHHHHHHH-----HCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccC
Confidence 35799999999999999999999 78999999998654310 00
Q ss_pred CCcc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccc
Q 030483 55 TALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 55 ~~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~ 122 (176)
.+.| ...+.+.+++|+.++.++++++++. ++++||++||..+||.+ ...|+
T Consensus 79 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~SS~~~~g~~------------~~~~~ 141 (341)
T 3enk_A 79 ITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-----AVKRIVFSSSATVYGVP------------ERSPI 141 (341)
T ss_dssp CCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGBCSC------------SSSSB
T ss_pred CcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEEecceEecCC------------CCCCC
Confidence 0011 1234567889999999999999987 57899999999999743 24678
Q ss_pred cCCCCCCCCCcchHHH-----HHHHHh--hCC-CceEEEeccCceEeCCC
Q 030483 123 KEDSSRLPFPNFYYEL-----EDVSAS--YSP-AITYSVHRSSVIIGASP 164 (176)
Q Consensus 123 ~E~~~~~~~~~~y~~~-----e~~~~~--~~~-g~~~~ivRp~~v~G~~~ 164 (176)
+|+++.. +...|.. |.++.. ... +++++++||++||||..
T Consensus 142 ~e~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~ 189 (341)
T 3enk_A 142 DETFPLS--ATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHE 189 (341)
T ss_dssp CTTSCCB--CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCT
T ss_pred CCCCCCC--CCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCcc
Confidence 8998764 3333443 333332 233 59999999999999975
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.7e-21 Score=154.42 Aligned_cols=137 Identities=15% Similarity=0.140 Sum_probs=98.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC------------CCCcc------c-------Cc
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF------------PTALV------Q-------ES 61 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~------------~~~~v------~-------~~ 61 (176)
|++|+||||||+||||++|+++|+ +.|++|++++|+..-... ..+.| . .+
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~-----~~g~~v~~~~r~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~ 75 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLE-----QRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTY 75 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHT-----TCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----hCCCeEEEEecCccCCccCHHHHHHHHHhcCCCEEEEcCeecCCcchhhhC
Confidence 345799999999999999999999 689999999886432110 11111 1 24
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCC--CCC-cchHHH
Q 030483 62 EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL--PFP-NFYYEL 138 (176)
Q Consensus 62 ~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~--~~~-~~y~~~ 138 (176)
+.+.+++|+.++.+++++|.+. ++++||++||..+||.. ...|++|+++.. +.| ...|..
T Consensus 76 ~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~vyg~~------------~~~~~~E~~~~~~~~~p~~~~Y~~ 138 (321)
T 1e6u_A 76 PADFIYQNMMIESNIIHAAHQN-----DVNKLLFLGSSCIYPKL------------AKQPMAESELLQGTLEPTNEPYAI 138 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGGGSCTT------------CCSSBCGGGTTSSCCCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEccHHHcCCC------------CCCCcCccccccCCCCCCCCccHH
Confidence 5667899999999999999987 57899999999999743 135788887321 123 224444
Q ss_pred HHH-----HHh--hCCCceEEEeccCceEeCCCC
Q 030483 139 EDV-----SAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 139 e~~-----~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.|+ +.+ +..+++++++||++||||+..
T Consensus 139 sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~ 172 (321)
T 1e6u_A 139 AKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDN 172 (321)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCC
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCC
Confidence 333 332 235899999999999999863
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=151.16 Aligned_cols=131 Identities=16% Similarity=0.165 Sum_probs=94.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC--------------CC---------CCcc--------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------------FP---------TALV-------- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------------~~---------~~~v-------- 58 (176)
|+||||||+||||++|+++|+ ++| .|++++|+..... .. .+.|
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~-----~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~d~vih~a~~~~ 75 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLS-----ESN-EIVVIDNLSSGNEEFVNEAARLVKADLAADDIKDYLKGAEEVWHIAANPD 75 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHT-----TTS-CEEEECCCSSCCGGGSCTTEEEECCCTTTSCCHHHHTTCSEEEECCCCCC
T ss_pred CEEEEECCCchHHHHHHHHHH-----hCC-CEEEEEcCCCCChhhcCCCcEEEECcCChHHHHHHhcCCCEEEECCCCCC
Confidence 589999999999999999999 688 5555554332110 00 0111
Q ss_pred ----cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcc
Q 030483 59 ----QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNF 134 (176)
Q Consensus 59 ----~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~ 134 (176)
..++.+.+++|+.++.++++++.+. ++++||++||..+||.. ...|++|+++.. |..
T Consensus 76 ~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~iv~~SS~~vyg~~------------~~~~~~E~~~~~--~~~ 136 (313)
T 3ehe_A 76 VRIGAENPDEIYRNNVLATYRLLEAMRKA-----GVSRIVFTSTSTVYGEA------------KVIPTPEDYPTH--PIS 136 (313)
T ss_dssp CC-CCCCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGGCSC------------SSSSBCTTSCCC--CCS
T ss_pred hhhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeCchHHhCcC------------CCCCCCCCCCCC--CCC
Confidence 2456788999999999999999987 57899999999999843 246888988754 333
Q ss_pred hHHH-----HHHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 135 YYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 135 y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.|.. |.++.. .+.+++++++||++||||+..
T Consensus 137 ~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 174 (313)
T 3ehe_A 137 LYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRST 174 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCC
Confidence 4443 333333 356999999999999999753
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-20 Score=151.21 Aligned_cols=131 Identities=17% Similarity=0.095 Sum_probs=98.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---C-C----------------------CCcc-----
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---F-P----------------------TALV----- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---~-~----------------------~~~v----- 58 (176)
|+||||||+||||++|+++|+ +.|++|++++|...... . . .+.|
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~ 76 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLV-----DEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAA 76 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHH-----hCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCc
Confidence 589999999999999999999 68999999998643210 0 0 0011
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCC
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF 131 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~ 131 (176)
..++.+.+++|+.++.+++++|.+. ++++||++||..+|+.+ ...|++|+++..
T Consensus 77 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~Ss~~~~~~~------------~~~~~~E~~~~~-- 137 (330)
T 2c20_A 77 DSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-----KVDKFIFSSTAATYGEV------------DVDLITEETMTN-- 137 (330)
T ss_dssp CCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGGGGCSC------------SSSSBCTTSCCC--
T ss_pred ccCccccccCHHHHHHHHhHHHHHHHHHHHHc-----CCCEEEEeCCceeeCCC------------CCCCCCcCCCCC--
Confidence 1244567899999999999999887 57899999999999743 145889998754
Q ss_pred CcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 132 PNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 132 ~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
|...|.. |.++.+ ...+++++++||++||||+.
T Consensus 138 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~ 177 (330)
T 2c20_A 138 PTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATP 177 (330)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCT
T ss_pred CCChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCC
Confidence 3333433 444433 35689999999999999974
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=144.54 Aligned_cols=131 Identities=11% Similarity=0.064 Sum_probs=91.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---CCC--------------------Ccc------cC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPT--------------------ALV------QE 60 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~--------------------~~v------~~ 60 (176)
|+|||||||||||++|+++|+ +.|++|++++|++.... ... +.| ..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~ 79 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEAL-----NRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGW 79 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHH-----TTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC--
T ss_pred CEEEEEcCCchHHHHHHHHHH-----HCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCC
Confidence 689999999999999999999 78999999999864321 000 111 11
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHH
Q 030483 61 SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED 140 (176)
Q Consensus 61 ~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~ 140 (176)
+..+.+++|+.++.++++++.+. ++++|+++||..+|... .....|+.+.. |...|...|
T Consensus 80 ~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~~~~~-------------~~~~~~~~~~~--p~~~Y~~sK 139 (227)
T 3dhn_A 80 NNPDIYDETIKVYLTIIDGVKKA-----GVNRFLMVGGAGSLFIA-------------PGLRLMDSGEV--PENILPGVK 139 (227)
T ss_dssp ----CCSHHHHHHHHHHHHHHHT-----TCSEEEEECCSTTSEEE-------------TTEEGGGTTCS--CGGGHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCChhhccCC-------------CCCccccCCcc--hHHHHHHHH
Confidence 22336778999999999999987 57899999998876532 11223444433 344444333
Q ss_pred -----HHHh--hCCCceEEEeccCceEeCCCC
Q 030483 141 -----VSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 141 -----~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
+++. +..+++++++||+++|||+..
T Consensus 140 ~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~ 171 (227)
T 3dhn_A 140 ALGEFYLNFLMKEKEIDWVFFSPAADMRPGVR 171 (227)
T ss_dssp HHHHHHHHTGGGCCSSEEEEEECCSEEESCCC
T ss_pred HHHHHHHHHHhhccCccEEEEeCCcccCCCcc
Confidence 3333 367999999999999999863
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=8e-21 Score=153.27 Aligned_cols=134 Identities=14% Similarity=0.037 Sum_probs=98.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC----------CC---------C-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----------FP---------T------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----------~~---------~------------- 55 (176)
++++||||||+||||++|+++|+ +.|++|++++|+..... .. +
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLL-----EKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQP 87 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCChHHHHHHHHHH-----HCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCC
Confidence 56889999999999999999999 68999999999764310 00 0
Q ss_pred Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-cEEEEeccceeecccccCCCccCCCCCCCccc
Q 030483 56 ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL-RHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 56 ~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v-~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~ 122 (176)
+.| ..++.+.+++|+.++.++++++.+. ++ ++||++||..+||.. ...|+
T Consensus 88 d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~~v~~SS~~v~g~~------------~~~~~ 150 (335)
T 1rpn_A 88 QEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-----SPETRFYQASTSEMFGLI------------QAERQ 150 (335)
T ss_dssp SEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-----CTTSEEEEEEEGGGGCSC------------SSSSB
T ss_pred CEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-----CCCCeEEEEeCHHHhCCC------------CCCCC
Confidence 111 2345677899999999999999987 44 799999999999743 13578
Q ss_pred cCCCCCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 123 KEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 123 ~E~~~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
+|+++.. |...|.. |.++.+ ...+++++++||+++|||+..
T Consensus 151 ~E~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~ 198 (335)
T 1rpn_A 151 DENTPFY--PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRG 198 (335)
T ss_dssp CTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSC
T ss_pred CcccCCC--CCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCC
Confidence 8988765 3333443 333333 245899999999999999763
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=151.69 Aligned_cols=134 Identities=10% Similarity=0.067 Sum_probs=95.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC--C--C--------------------CCcc------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--F--P--------------------TALV------ 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~--~--------------------~~~v------ 58 (176)
+|+|||||||||||++|+++|+ +.|++|++++|++.... . . .+.|
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIR-----AAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGY 87 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence 3689999999999999999999 68999999999764310 0 0 0111
Q ss_pred ----cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCC--
Q 030483 59 ----QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP-- 132 (176)
Q Consensus 59 ----~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~-- 132 (176)
..++.+.+++|+.++.+++++|.+. ++++||++||..+|+... + ...+ +|+++..|..
T Consensus 88 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~------~----~~~~-~E~~~~~p~~~~ 151 (342)
T 2x4g_A 88 YPSRPRRWQEEVASALGQTNPFYAACLQA-----RVPRILYVGSAYAMPRHP------Q----GLPG-HEGLFYDSLPSG 151 (342)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHH-----TCSCEEEECCGGGSCCCT------T----SSCB-CTTCCCSSCCTT
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEECCHHhhCcCC------C----CCCC-CCCCCCCccccc
Confidence 1234567899999999999999987 578999999999997431 0 0134 8888765311
Q ss_pred cchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 133 NFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 133 ~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
...|.. |.++.+ +. +++++++||++||||..
T Consensus 152 ~~~Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~ 189 (342)
T 2x4g_A 152 KSSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELD 189 (342)
T ss_dssp SCHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCC
T ss_pred cChHHHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCC
Confidence 333443 344333 24 89999999999999975
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=151.15 Aligned_cols=135 Identities=14% Similarity=0.061 Sum_probs=97.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC------C-----------CCC---------C------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP------G-----------WFP---------T------ 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~------~-----------~~~---------~------ 55 (176)
|+|+||||||+||||++|+++|+ +.|++|++++|.... . ... +
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~ 75 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELL-----EAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQR 75 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHH-----HTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHH
Confidence 45799999999999999999999 689999999885322 0 000 0
Q ss_pred -------Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCC
Q 030483 56 -------ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 116 (176)
Q Consensus 56 -------~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~ 116 (176)
+.| ..++.+.+++|+.++.++++++.+. ++++||++||..+||.+
T Consensus 76 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~SS~~~~g~~----------- 139 (348)
T 1ek6_A 76 LFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-----GVKNLVFSSSATVYGNP----------- 139 (348)
T ss_dssp HHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCSC-----------
T ss_pred HHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEECcHHHhCCC-----------
Confidence 001 1234567899999999999999887 57899999999999743
Q ss_pred CCCccccCCCCCCCCCcchHH----HHHHHHh--hC-CCceEEEeccCceEeCCC
Q 030483 117 PYEVPFKEDSSRLPFPNFYYE----LEDVSAS--YS-PAITYSVHRSSVIIGASP 164 (176)
Q Consensus 117 ~~~~p~~E~~~~~~~~~~y~~----~e~~~~~--~~-~g~~~~ivRp~~v~G~~~ 164 (176)
...|++|+++..|....|.. .|.++.+ .. .+++++++||++||||.+
T Consensus 140 -~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~ 193 (348)
T 1ek6_A 140 -QYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHA 193 (348)
T ss_dssp -SSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCT
T ss_pred -CCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCc
Confidence 14688999875532234432 2333333 12 349999999999999964
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=149.86 Aligned_cols=130 Identities=18% Similarity=0.164 Sum_probs=97.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-----------CCCcc------------cCcHHH
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-----------PTALV------------QESEEV 64 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-----------~~~~v------------~~~~~~ 64 (176)
..++|||||||||||++|+++|+ ++|++|++++|+..+... ..+.| ..++.+
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~ 85 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLK-----GKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDL 85 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHT-----TSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHH
T ss_pred ccceEEEECCCChHHHHHHHHHH-----hCCCeEEeccCccCCCCCHHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHH
Confidence 35789999999999999999999 689999999998654321 11211 124567
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh
Q 030483 65 NIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS 144 (176)
Q Consensus 65 ~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~ 144 (176)
.+++|+.++.++++++.+. ++ +|+++||..+|+.. ...|++|+++.. |...|...|...|
T Consensus 86 ~~~~nv~~~~~l~~a~~~~-----~~-~iv~~SS~~v~~~~------------~~~~~~E~~~~~--~~~~Y~~sK~~~E 145 (292)
T 1vl0_A 86 AYKINAIGPKNLAAAAYSV-----GA-EIVQISTDYVFDGE------------AKEPITEFDEVN--PQSAYGKTKLEGE 145 (292)
T ss_dssp HHHHHTHHHHHHHHHHHHH-----TC-EEEEEEEGGGSCSC------------CSSCBCTTSCCC--CCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHc-----CC-eEEEechHHeECCC------------CCCCCCCCCCCC--CccHHHHHHHHHH
Confidence 7899999999999999987 45 89999999999743 135788998754 3334544444433
Q ss_pred ---hCCCceEEEeccCceEeC
Q 030483 145 ---YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 145 ---~~~g~~~~ivRp~~v~G~ 162 (176)
+..+.+++++||++||||
T Consensus 146 ~~~~~~~~~~~~lR~~~v~G~ 166 (292)
T 1vl0_A 146 NFVKALNPKYYIVRTAWLYGD 166 (292)
T ss_dssp HHHHHHCSSEEEEEECSEESS
T ss_pred HHHHhhCCCeEEEeeeeeeCC
Confidence 233457999999999999
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.84 E-value=6e-21 Score=152.45 Aligned_cols=134 Identities=15% Similarity=0.092 Sum_probs=97.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCC--CcEEEEEecCCCCCC------------C------------CCCcc---
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPPGW------------F------------PTALV--- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~~~------------~------------~~~~v--- 58 (176)
|+|+|||||||||||++|+++|+ +. |++|++++|+..... . ..+.|
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~-----~~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~ 75 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLR-----KLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLM 75 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHH-----HHHCGGGEEEEESCCCSCHHHHSSCEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred CCceEEEECCccHHHHHHHHHHH-----HhCCCCEEEEEcCCCccccccCCCceEEecCCCHHHHHHHHhhcCCCEEEEC
Confidence 35789999999999999999999 56 899999999764310 0 00111
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCC
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 130 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~ 130 (176)
..++.+.+++|+.++.++++++.+. ++++|+++||..+|+... ...+.+|+++..
T Consensus 76 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~-----------~~~~~~e~~~~~- 138 (312)
T 2yy7_A 76 AALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-----KIKKIFWPSSIAVFGPTT-----------PKENTPQYTIME- 138 (312)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-----SCSEEECCEEGGGCCTTS-----------CSSSBCSSCBCC-
T ss_pred CccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeccHHHhCCCC-----------CCCCccccCcCC-
Confidence 1245567899999999999999987 578999999999997421 134677887654
Q ss_pred CCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 131 FPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 131 ~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
|...|.. |.++.+ ...+++++++||+++|||..
T Consensus 139 -~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~ 178 (312)
T 2yy7_A 139 -PSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWST 178 (312)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSS
T ss_pred -CCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCC
Confidence 3333443 333333 24589999999999999763
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-20 Score=149.11 Aligned_cols=137 Identities=15% Similarity=0.092 Sum_probs=94.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc----EEEEEecCCCCCCC---------C--CCcc-------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW----KVYGAARRPPPGWF---------P--TALV------------- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~----~V~~l~R~~~~~~~---------~--~~~v------------- 58 (176)
|++|+|||||||||||++|+++|+ +.|+ +...+.....+... . .+.|
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~-----~~g~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~ 78 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVA-----DGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRN 78 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHH-----TTTCCTTCEEEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCCCHHHH
T ss_pred ccCCeEEEECCCcHHHHHHHHHHH-----hcCCcccccccccCceecccCCHHHHHHHHhhcCCCEEEECceeccccccc
Confidence 567899999999999999999999 5665 22222211111110 0 1111
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCC--CCCcch-
Q 030483 59 QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL--PFPNFY- 135 (176)
Q Consensus 59 ~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~--~~~~~y- 135 (176)
..++.+.+++|+.++.+++++|++. ++++||++||..+||.. ...|++|+++.. +.|..+
T Consensus 79 ~~~~~~~~~~nv~gt~~ll~a~~~~-----~~~~~v~~SS~~vyg~~------------~~~~~~E~~~~~~~~~p~~~~ 141 (319)
T 4b8w_A 79 IKYNLDFWRKNVHMNDNVLHSAFEV-----GARKVVSCLSTCIFPDK------------TTYPIDETMIHNGPPHNSNFG 141 (319)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEECCGGGSCSS------------CCSSBCGGGGGBSCCCSSSHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEEcchhhcCCC------------CCCCccccccccCCCCCCcch
Confidence 2355678999999999999999987 57899999999999743 246888887321 223332
Q ss_pred HHHHH-----HHHh--hCCCceEEEeccCceEeCCCC
Q 030483 136 YELED-----VSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 136 ~~~e~-----~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
|...| ++.+ +..+++++++||++||||+..
T Consensus 142 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~ 178 (319)
T 4b8w_A 142 YSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDN 178 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCC
T ss_pred HHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCC
Confidence 44333 3333 346899999999999999863
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=153.87 Aligned_cols=133 Identities=20% Similarity=0.167 Sum_probs=99.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------CCC------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------WFP------------------ 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~~~------------------ 54 (176)
.+|+|||||||||||++|+++|+ +.|++|++++|+.... ...
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 100 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLL-----KLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC 100 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH
T ss_pred cCCeEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh
Confidence 35789999999999999999999 6899999999965310 000
Q ss_pred --CCcc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCc
Q 030483 55 --TALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 120 (176)
Q Consensus 55 --~~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~ 120 (176)
.+.| ..++.+.+++|+.++.+++++|.+. ++++||++||..+|+.. ...
T Consensus 101 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~------------~~~ 163 (352)
T 1sb8_A 101 AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-----KVQSFTYAASSSTYGDH------------PGL 163 (352)
T ss_dssp TTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGTTC------------CCS
T ss_pred cCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeccHHhcCCC------------CCC
Confidence 0111 1245567899999999999999987 57899999999999742 135
Q ss_pred cccCCCCCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 121 PFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 121 p~~E~~~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
|++|+++.. |...|.. |.++.. ...+++++++||++||||..
T Consensus 164 ~~~E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~ 212 (352)
T 1sb8_A 164 PKVEDTIGK--PLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQ 212 (352)
T ss_dssp SBCTTCCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTC
T ss_pred CCCCCCCCC--CCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCC
Confidence 788988754 3334443 333332 24589999999999999986
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=151.43 Aligned_cols=132 Identities=14% Similarity=0.248 Sum_probs=87.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-------CCCC-----------CCcc-----------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-------GWFP-----------TALV----------- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-------~~~~-----------~~~v----------- 58 (176)
|+|+|||||||||||++|+++|+ +.|++|++++|+... .... .+.|
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~ 75 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQ-----QNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDV 75 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----TTTCEEEEEC------------------CHHHHHHHCCSEEEECC-------
T ss_pred CCCeEEEECCCcHHHHHHHHHHH-----hCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCcccChhh
Confidence 45799999999999999999999 689999999986432 0000 1111
Q ss_pred -cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHH
Q 030483 59 -QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE 137 (176)
Q Consensus 59 -~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~ 137 (176)
..++.+.+++|+.++.++++++.+. ++ +|+++||..+|+.. ..|++|+++.. |...|.
T Consensus 76 ~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~v~~~~-------------~~~~~E~~~~~--~~~~Y~ 134 (315)
T 2ydy_A 76 VENQPDAASQLNVDASGNLAKEAAAV-----GA-FLIYISSDYVFDGT-------------NPPYREEDIPA--PLNLYG 134 (315)
T ss_dssp ------------CHHHHHHHHHHHHH-----TC-EEEEEEEGGGSCSS-------------SCSBCTTSCCC--CCSHHH
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEchHHHcCCC-------------CCCCCCCCCCC--CcCHHH
Confidence 1234567899999999999999987 44 89999999998741 35788988754 334455
Q ss_pred HHHHHHh---hCCCceEEEeccCceEeCCCC
Q 030483 138 LEDVSAS---YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 138 ~e~~~~~---~~~g~~~~ivRp~~v~G~~~~ 165 (176)
..|...| +..+++++++||++||||...
T Consensus 135 ~sK~~~e~~~~~~~~~~~~lR~~~v~G~~~~ 165 (315)
T 2ydy_A 135 KTKLDGEKAVLENNLGAAVLRIPILYGEVEK 165 (315)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEECSEECSCSS
T ss_pred HHHHHHHHHHHHhCCCeEEEeeeeeeCCCCc
Confidence 4444433 234678899999999999864
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=153.41 Aligned_cols=136 Identities=18% Similarity=0.100 Sum_probs=98.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------CC----------------------C
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FP----------------------T 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~----------------------~ 55 (176)
+.+|+||||||+||||++|+++|+ +.|++|++++|+..... .. .
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQ-----TMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQP 81 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCC
T ss_pred hCCCEEEEECCCchHHHHHHHHHH-----hCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCC
Confidence 346899999999999999999999 68999999999754310 00 0
Q ss_pred Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcccc
Q 030483 56 ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 56 ~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~ 123 (176)
+.| ..++.+.+++|+.++.+++++|.+. . .+++||++||..+||... ...+++
T Consensus 82 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~-~~~~~v~~SS~~vyg~~~-----------~~~~~~ 146 (357)
T 1rkx_A 82 EIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHV---G-GVKAVVNITSDKCYDNKE-----------WIWGYR 146 (357)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---C-CCCEEEEECCGGGBCCCC-----------SSSCBC
T ss_pred CEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHh---C-CCCeEEEecCHHHhCCCC-----------cCCCCC
Confidence 111 1234567889999999999999987 2 378999999999998431 124678
Q ss_pred CCCCCCCCCcchHHH-----HHHHHh--hC---------CCceEEEeccCceEeCCC
Q 030483 124 EDSSRLPFPNFYYEL-----EDVSAS--YS---------PAITYSVHRSSVIIGASP 164 (176)
Q Consensus 124 E~~~~~~~~~~y~~~-----e~~~~~--~~---------~g~~~~ivRp~~v~G~~~ 164 (176)
|+++.. +...|.. |.++.. .. .+++++++||++||||+.
T Consensus 147 E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~ 201 (357)
T 1rkx_A 147 ENEAMG--GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD 201 (357)
T ss_dssp TTSCBC--CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC
T ss_pred CCCCCC--CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCC
Confidence 887654 3333433 333332 11 289999999999999975
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-20 Score=149.81 Aligned_cols=134 Identities=14% Similarity=0.132 Sum_probs=96.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCC-------C---CC--------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG-------W---FP--------------------T 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~-------~---~~--------------------~ 55 (176)
++|+||||||+||||++|+++|+ +.| ++|++++|..... . .. .
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~-----~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 76 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYIL-----EKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKV 76 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTC
T ss_pred CCCeEEEECCCchHHHHHHHHHH-----HhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCC
Confidence 34689999999999999999999 564 9999999864210 0 00 0
Q ss_pred Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcccc
Q 030483 56 ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 56 ~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~ 123 (176)
+.| ..++.+.+++|+.++.+++++|.+. . ..++||++||..+||.. ...|++
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~-~~~~iv~~SS~~vyg~~------------~~~~~~ 140 (336)
T 2hun_A 77 DGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRE---N-PEVRFVHVSTDEVYGDI------------LKGSFT 140 (336)
T ss_dssp SEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHH---C-TTSEEEEEEEGGGGCCC------------SSSCBC
T ss_pred CEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHh---C-CCcEEEEeccHHHHCCC------------CCCCcC
Confidence 011 1234567899999999999999987 2 23699999999999743 135788
Q ss_pred CCCCCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 124 EDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 124 E~~~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
|+++.. +...|.. |.++.+ .+.+++++++||++||||..
T Consensus 141 E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~ 186 (336)
T 2hun_A 141 ENDRLM--PSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQ 186 (336)
T ss_dssp TTBCCC--CCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTC
T ss_pred CCCCCC--CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCC
Confidence 988754 3333443 333333 34689999999999999985
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-20 Score=148.56 Aligned_cols=132 Identities=15% Similarity=0.047 Sum_probs=95.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---C-CC----------------------CCcc-----
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W-FP----------------------TALV----- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~-~~----------------------~~~v----- 58 (176)
|+||||||+||||++|+++|+ +.|++|++++|..... . .. .+.|
T Consensus 1 m~vlVTGatG~iG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~ 75 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLL-----ARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAA 75 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----TTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred CEEEEEeCCcHHHHHHHHHHH-----HCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence 479999999999999999999 7899999999843211 0 00 0001
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc-eeecccccCCCccCCCCCCCccccCCCCCCC
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT-KHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 130 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~-~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~ 130 (176)
..++...+++|+.++.++++++.+. ++++|+++||. .+||... ...|++|+++..
T Consensus 76 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-----~~~~iv~~SS~~~~~g~~~-----------~~~~~~E~~~~~- 138 (311)
T 2p5y_A 76 QASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-----GVEKLVFASTGGAIYGEVP-----------EGERAEETWPPR- 138 (311)
T ss_dssp CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEHHHHHCCCC-----------TTCCBCTTSCCC-
T ss_pred ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCCChhhcCCCC-----------CCCCcCCCCCCC-
Confidence 1234567899999999999999887 57899999998 8887411 135788888754
Q ss_pred CCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 131 FPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 131 ~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
|...|.. |.++.. ++.+++++++||++||||+.
T Consensus 139 -~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~ 178 (311)
T 2p5y_A 139 -PKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQ 178 (311)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTC
T ss_pred -CCChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCC
Confidence 3333433 333332 24589999999999999975
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=5.9e-20 Score=149.01 Aligned_cols=134 Identities=17% Similarity=0.119 Sum_probs=95.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C---CC---------------CCcc-----
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W---FP---------------TALV----- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~---------------~~~v----- 58 (176)
.+|+|||||||||||++|+++|+ +.|++|++++|..... + .. .+.|
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih~A~ 100 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLM-----MDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLAS 100 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCS
T ss_pred CCCEEEEEcCccHHHHHHHHHHH-----HCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEECcc
Confidence 46799999999999999999999 6899999999864211 0 00 0111
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCC---
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR--- 128 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~--- 128 (176)
..++.+.+++|+.++.+++++|.+. ++ +|+++||..+||.. ...|++|++..
T Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~v~g~~------------~~~~~~E~~~~~~~ 162 (343)
T 2b69_A 101 PASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-----GA-RLLLASTSEVYGDP------------EVHPQSEDYWGHVN 162 (343)
T ss_dssp CCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-----TC-EEEEEEEGGGGBSC------------SSSSBCTTCCCBCC
T ss_pred ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CC-cEEEECcHHHhCCC------------CCCCCcccccccCC
Confidence 1245667899999999999999987 44 79999999999743 13567777421
Q ss_pred CCCCcchHHHH-----HHHHh--hCCCceEEEeccCceEeCCC
Q 030483 129 LPFPNFYYELE-----DVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 129 ~~~~~~y~~~e-----~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
...+...|... .++.+ +..+++++++||++||||+.
T Consensus 163 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~ 205 (343)
T 2b69_A 163 PIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRM 205 (343)
T ss_dssp SSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTC
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCC
Confidence 11233344433 33332 24589999999999999975
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.9e-20 Score=145.81 Aligned_cols=134 Identities=12% Similarity=-0.019 Sum_probs=101.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-C--------------------CCcc--------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-P--------------------TALV-------- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~--------------------~~~v-------- 58 (176)
++|+||||||+||||++|+++|+ +.|++|++++|+...... . .+.|
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~ 76 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLA-----PMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGCDGIVHLGGISV 76 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTG-----GGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----hcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcC
Confidence 35789999999999999999999 799999999998754211 0 0111
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHH
Q 030483 59 QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL 138 (176)
Q Consensus 59 ~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~ 138 (176)
..++++.+++|+.++.++++++++. ++++||++||..+||... ...+++|+.+.. +...|..
T Consensus 77 ~~~~~~~~~~N~~g~~~l~~a~~~~-----~~~~iv~~SS~~~~g~~~-----------~~~~~~e~~~~~--~~~~Y~~ 138 (267)
T 3rft_A 77 EKPFEQILQGNIIGLYNLYEAARAH-----GQPRIVFASSNHTIGYYP-----------QTERLGPDVPAR--PDGLYGV 138 (267)
T ss_dssp CCCHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEEGGGGTTSB-----------TTSCBCTTSCCC--CCSHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcchHHhCCCC-----------CCCCCCCCCCCC--CCChHHH
Confidence 3456788999999999999999887 578999999999997431 245788888754 3444544
Q ss_pred HHHHHh-------hCCCceEEEeccCceEeCCC
Q 030483 139 EDVSAS-------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 139 e~~~~~-------~~~g~~~~ivRp~~v~G~~~ 164 (176)
.|...+ .+.+++++++||+.|||+..
T Consensus 139 sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~ 171 (267)
T 3rft_A 139 SKCFGENLARMYFDKFGQETALVRIGSCTPEPN 171 (267)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCC
T ss_pred HHHHHHHHHHHHHHHhCCeEEEEEeecccCCCC
Confidence 443322 35689999999999998754
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=7e-20 Score=150.92 Aligned_cols=141 Identities=16% Similarity=0.122 Sum_probs=99.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC----C--------------------CCcc-----
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF----P--------------------TALV----- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~----~--------------------~~~v----- 58 (176)
++|+||||||+||||++|+++|+ +.|++|++++|+...... . .+.|
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~ 102 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLK-----HEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA 102 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred cCCeEEEECCccHHHHHHHHHHH-----HCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECce
Confidence 35789999999999999999999 689999999997643210 0 0111
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCC
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 130 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~ 130 (176)
..++.+.+++|+.++.++++++.+. ++++||++||..+|+.... .. +...+++|+++...
T Consensus 103 ~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~~V~~SS~~v~~~~~~-----~~--~~~~~~~E~~~~~~ 170 (379)
T 2c5a_A 103 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-----GIKRFFYASSACIYPEFKQ-----LE--TTNVSLKESDAWPA 170 (379)
T ss_dssp CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEEEEGGGSCGGGS-----SS--SSSCEECGGGGSSB
T ss_pred ecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEeehheeCCCCC-----CC--ccCCCcCcccCCCC
Confidence 1245667899999999999999887 5789999999999974310 00 01246788763212
Q ss_pred CCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 131 FPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 131 ~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.+...|.. |.++.+ +..+++++++||++||||...
T Consensus 171 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~ 212 (379)
T 2c5a_A 171 EPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGT 212 (379)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCC
Confidence 23334443 333332 345899999999999999753
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-20 Score=151.01 Aligned_cols=147 Identities=18% Similarity=0.170 Sum_probs=92.1
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-----------CC---------C-----
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FP---------T----- 55 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~---------~----- 55 (176)
|-.+-+.|+|+||||||+||||++|+++|+ ++||+|+++.|+..... .. +
T Consensus 1 ~~~~~~~~~~~vlVTGatGfIG~~l~~~Ll-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 75 (338)
T 2rh8_A 1 MATQHPIGKKTACVVGGTGFVASLLVKLLL-----QKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFE 75 (338)
T ss_dssp --------CCEEEEECTTSHHHHHHHHHHH-----HTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSH
T ss_pred CCcCcCCCCCEEEEECCchHHHHHHHHHHH-----HCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHH
Confidence 334444457899999999999999999999 79999999988643210 00 0
Q ss_pred ------Ccc------c----CcH-HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce-eecccccCCCccCCCCC
Q 030483 56 ------ALV------Q----ESE-EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK-HYMGPIFDPSLAGQLMP 117 (176)
Q Consensus 56 ------~~v------~----~~~-~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~-~yg~~~~d~~~~g~~~~ 117 (176)
+.| . .++ .+.+++|+.++.+++++|.+. . ++++||++||.. +|+.+. .+
T Consensus 76 ~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~---~-~v~r~V~~SS~~~~~~~~~-----~~---- 142 (338)
T 2rh8_A 76 APIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRA---K-SVKRVILTSSAAAVTINQL-----DG---- 142 (338)
T ss_dssp HHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHC---T-TCCEEEEECCHHHHHHHHH-----TC----
T ss_pred HHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHc---C-CcCEEEEEecHHHeecCCc-----CC----
Confidence 001 0 122 237889999999999999986 2 378999999977 444221 01
Q ss_pred CCccccCCCCCC--------C----CCcchHHHHHHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 118 YEVPFKEDSSRL--------P----FPNFYYELEDVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 118 ~~~p~~E~~~~~--------~----~~~~y~~~e~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
...+++|+++.. + +...+...|.++.+ +.++++++++||++||||...
T Consensus 143 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~ 204 (338)
T 2rh8_A 143 TGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLT 204 (338)
T ss_dssp SCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSS
T ss_pred CCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence 013667765221 0 11122335665544 346899999999999999763
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=144.49 Aligned_cols=130 Identities=14% Similarity=0.162 Sum_probs=96.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC----CCCC---------C--CCcc------------cCcH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP----PGWF---------P--TALV------------QESE 62 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~----~~~~---------~--~~~v------------~~~~ 62 (176)
|+|||||||||||++|+++|+ +|++|++++|+.. +... . .+.| ..++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~------~g~~V~~~~r~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~ 74 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA------PVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEP 74 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT------TTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCH
T ss_pred CeEEEECCCCHHHHHHHHHhh------cCCeEEEeccccccccccCCCHHHHHHHHHhcCCCEEEECcccCCHhhhhcCH
Confidence 479999999999999999999 4899999999762 1110 0 1111 2356
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHH
Q 030483 63 EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVS 142 (176)
Q Consensus 63 ~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~ 142 (176)
.+.+++|+.++.+++++|++. ++ +|+++||..+|+.. ...|++|+++.. |...|...|+.
T Consensus 75 ~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~vy~~~------------~~~~~~E~~~~~--p~~~Y~~sK~~ 134 (299)
T 1n2s_A 75 ELAQLLNATSVEAIAKAANET-----GA-WVVHYSTDYVFPGT------------GDIPWQETDATS--PLNVYGKTKLA 134 (299)
T ss_dssp HHHHHHHTHHHHHHHHHHTTT-----TC-EEEEEEEGGGSCCC------------TTCCBCTTSCCC--CSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----CC-cEEEEecccEEeCC------------CCCCCCCCCCCC--CccHHHHHHHH
Confidence 678899999999999999886 45 79999999999743 135788998754 33445544444
Q ss_pred Hh---hCCCceEEEeccCceEeCCCC
Q 030483 143 AS---YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 143 ~~---~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.| +....+++++||+++|||...
T Consensus 135 ~E~~~~~~~~~~~ilRp~~v~G~~~~ 160 (299)
T 1n2s_A 135 GEKALQDNCPKHLIFRTSWVYAGKGN 160 (299)
T ss_dssp HHHHHHHHCSSEEEEEECSEECSSSC
T ss_pred HHHHHHHhCCCeEEEeeeeecCCCcC
Confidence 33 223348999999999999764
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.9e-20 Score=148.43 Aligned_cols=131 Identities=16% Similarity=0.106 Sum_probs=95.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCC---C---cEEEEEecCCCCC-------C---CC-------------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGS---P---WKVYGAARRPPPG-------W---FP------------------- 54 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~---g---~~V~~l~R~~~~~-------~---~~------------------- 54 (176)
|+|||||||||||++|+++|+ ++ | ++|++++|..... . ..
T Consensus 1 M~vlVTGatG~iG~~l~~~L~-----~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 75 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLL-----AGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR 75 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT
T ss_pred CeEEEECCccHHHHHHHHHHH-----hhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhc
Confidence 479999999999999999999 55 7 9999999864210 0 00
Q ss_pred -CCcc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcc
Q 030483 55 -TALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 55 -~~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p 121 (176)
.+.| ..++.+.+++|+.++.++++++.+. ++++|+++||..+||... ..|
T Consensus 76 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-----~~~~~v~~SS~~vyg~~~------------~~~ 138 (337)
T 1r6d_A 76 GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-----GVGRVVHVSTNQVYGSID------------SGS 138 (337)
T ss_dssp TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCCCS------------SSC
T ss_pred CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEecchHHhCCCC------------CCC
Confidence 0111 1234567899999999999999987 578999999999997431 357
Q ss_pred ccCCCCCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 122 FKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 122 ~~E~~~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
++|+++.. +...|.. |.++.+ ...+++++++||++||||..
T Consensus 139 ~~E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~ 186 (337)
T 1r6d_A 139 WTESSPLE--PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQ 186 (337)
T ss_dssp BCTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTC
T ss_pred CCCCCCCC--CCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCC
Confidence 88888754 3333443 333333 24589999999999999985
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.8e-20 Score=151.20 Aligned_cols=133 Identities=15% Similarity=0.059 Sum_probs=89.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCCCCC------CCC--------------------CCcc---
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPG------WFP--------------------TALV--- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~------~~~--------------------~~~v--- 58 (176)
+|+|||||||||||++|+++|+ +.| ++|++++|+.... ... .+.|
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~-----~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~ 106 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLL-----ELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHL 106 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-----HTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEEC
T ss_pred CCEEEEECCccHHHHHHHHHHH-----HcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEEC
Confidence 4789999999999999999999 689 9999999975431 000 0111
Q ss_pred ---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcccc--CCC-
Q 030483 59 ---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK--EDS- 126 (176)
Q Consensus 59 ---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~--E~~- 126 (176)
..++.+.+++|+.++.+++++|.+. . ++++||++||..+||.. ...|++ |++
T Consensus 107 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~-~~~~~V~~SS~~vyg~~------------~~~~~~~~E~~~ 170 (377)
T 2q1s_A 107 ATYHGNQSSIHDPLADHENNTLTTLKLYERLKHF---K-RLKKVVYSAAGCSIAEK------------TFDDAKATEETD 170 (377)
T ss_dssp CCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTC---S-SCCEEEEEEEC--------------------------CCCC
T ss_pred CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh---C-CCCeEEEeCCHHHcCCC------------CCCCcCcccccc
Confidence 1245667899999999999999764 2 57899999999999743 134677 877
Q ss_pred --CC-CCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 127 --SR-LPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 127 --~~-~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+. . |...|.. |.++.+ ...+++++++||++||||..
T Consensus 171 ~~~~~~--~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~ 216 (377)
T 2q1s_A 171 IVSLHN--NDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGE 216 (377)
T ss_dssp CCCSSC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTC
T ss_pred cccccC--CCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCC
Confidence 43 3 3333433 444433 23589999999999999976
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-19 Score=149.28 Aligned_cols=134 Identities=19% Similarity=0.119 Sum_probs=97.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----C------------CCC----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----W------------FPT---------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~------------~~~---------------- 55 (176)
|+|+||||||+||||++|+++|+ +.|++|++++|+.... . ...
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 97 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLL-----EKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKI 97 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHH
T ss_pred cCcEEEEECCCchHHHHHHHHHH-----HCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHH
Confidence 34789999999999999999999 6899999999975420 0 000
Q ss_pred ------Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCc---cEEEEeccceeecccccCCCccCC
Q 030483 56 ------ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL---RHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 56 ------~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v---~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
+.| ..++.+.+++|+.++.++++++.+. ++ ++||++||..+|+..
T Consensus 98 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-----~~~~~~~iv~~SS~~~~~~~--------- 163 (375)
T 1t2a_A 98 INEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-----GLINSVKFYQASTSELYGKV--------- 163 (375)
T ss_dssp HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-----TCTTTCEEEEEEEGGGTCSC---------
T ss_pred HHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-----CCCccceEEEecchhhhCCC---------
Confidence 111 1234567899999999999999987 34 799999999999743
Q ss_pred CCCCCccccCCCCCCCCCcchHHHHHHH-----Hh--hCCCceEEEeccCceEeCCCC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYELEDVS-----AS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~e~~~-----~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
...|++|+++.. |...|...|+. .. ...+++++++||+++|||+..
T Consensus 164 ---~~~~~~E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~ 216 (375)
T 1t2a_A 164 ---QEIPQKETTPFY--PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRG 216 (375)
T ss_dssp ---SSSSBCTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred ---CCCCCCccCCCC--CCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCC
Confidence 135788988754 33344433333 32 245899999999999999753
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=149.27 Aligned_cols=139 Identities=14% Similarity=0.092 Sum_probs=97.1
Q ss_pred CCeEEEEcCChHHHHHHHHHhh-CCCCCCCCcEEEEEecCCCCC--------------------------C---C-----
Q 030483 9 KSVALIIGVTGISGLSLAEALK-NPTTPGSPWKVYGAARRPPPG--------------------------W---F----- 53 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~-~~~~~~~g~~V~~l~R~~~~~--------------------------~---~----- 53 (176)
+|+||||||+||||++|+++|+ + .|++|++++|..... . .
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRD-----TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVG 76 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHh-----CCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEEC
Confidence 3589999999999999999998 5 789999999864221 0 0
Q ss_pred ---------------C-CCcc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeeccc
Q 030483 54 ---------------P-TALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGP 105 (176)
Q Consensus 54 ---------------~-~~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~ 105 (176)
. .+.| ..++.+.+++|+.++.+++++|.+. ++++||++||..+|+.+
T Consensus 77 Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~iv~~SS~~v~g~~ 151 (397)
T 1gy8_A 77 DVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-----KCDKIIFSSSAAIFGNP 151 (397)
T ss_dssp CTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGTBSC
T ss_pred CCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-----CCCEEEEECCHHHhCCC
Confidence 0 0111 1234567899999999999999887 57899999999999743
Q ss_pred ccCCCccCCCCCCCccccCCCCCCCCCcchHHHH-----HHHHh--hCCCceEEEeccCceEeCCC
Q 030483 106 IFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELE-----DVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 106 ~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e-----~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
.. +...+...|++|+++.. |...|... .++.. ...+++++++||++||||+.
T Consensus 152 ~~-----~~~~~~~~~~~E~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~ 210 (397)
T 1gy8_A 152 TM-----GSVSTNAEPIDINAKKS--PESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHE 210 (397)
T ss_dssp CC----------CCCCBCTTSCCB--CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCT
T ss_pred Cc-----ccccccccCcCccCCCC--CCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCc
Confidence 10 00000136788998754 33334433 33332 23489999999999999974
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=8.5e-20 Score=148.85 Aligned_cols=132 Identities=10% Similarity=0.069 Sum_probs=96.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCCCCC----C-------------------C-----CCCcc
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPG----W-------------------F-----PTALV 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~----~-------------------~-----~~~~v 58 (176)
.+|+|||||||||||++|+++|+ +.| ++|++++|+.... . . ..+.|
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~-----~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~V 119 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALN-----DKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAI 119 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHH-----HTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEE
Confidence 34789999999999999999999 688 9999999865321 0 0 01111
Q ss_pred ----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCC
Q 030483 59 ----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR 128 (176)
Q Consensus 59 ----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~ 128 (176)
..++.+.+++|+.++.+++++|.+. ++ +||++||..+|+.. ...|++|+++.
T Consensus 120 ih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~-r~V~~SS~~v~g~~------------~~~~~~E~~~~ 181 (357)
T 2x6t_A 120 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYGGR------------TSDFIESREYE 181 (357)
T ss_dssp EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEEGGGGCSC------------SSCCCSSGGGC
T ss_pred EECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEcchHHhCCC------------CCCCcCCcCCC
Confidence 2356778899999999999999987 56 89999999999742 13478888875
Q ss_pred CCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 129 LPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 129 ~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
. |...|.. |+++.+ ...+++++++||++||||+.
T Consensus 182 ~--p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~ 222 (357)
T 2x6t_A 182 K--PLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPRE 222 (357)
T ss_dssp C--CSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSC
T ss_pred C--CCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCC
Confidence 4 3333433 444433 34689999999999999975
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7.4e-20 Score=148.29 Aligned_cols=142 Identities=12% Similarity=0.071 Sum_probs=96.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCC--CcEEEEEecCCCCC----C-----CC--------------------CCcc
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPPG----W-----FP--------------------TALV 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~~----~-----~~--------------------~~~v 58 (176)
|+||||||+||||++|+++|+ +. |++|++++|..... . .. .+.|
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~-----~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 79 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVY-----NNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAI 79 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHH-----HHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred cEEEEeCCccHHHHHHHHHHH-----HhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEE
Confidence 689999999999999999999 56 89999999964210 0 00 0111
Q ss_pred ------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCC
Q 030483 59 ------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 126 (176)
Q Consensus 59 ------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~ 126 (176)
..++.+.+++|+.++.+++++|.+. ++ +||++||..+||....+....+.......|++|++
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-----~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~ 153 (348)
T 1oc2_A 80 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-----DI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAET 153 (348)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-----TC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTS
T ss_pred EECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-----CC-eEEEecccceeCCCcccccccccccccCCCcCCCC
Confidence 1234567899999999999999987 45 89999999999743100000000000125788988
Q ss_pred CCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 127 SRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 127 ~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+.. +...|.. |.++.. ...+++++++||++||||..
T Consensus 154 ~~~--~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~ 196 (348)
T 1oc2_A 154 NYN--PSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQ 196 (348)
T ss_dssp CCC--CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTC
T ss_pred CCC--CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCC
Confidence 754 3333443 333333 24589999999999999986
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=145.69 Aligned_cols=133 Identities=18% Similarity=0.128 Sum_probs=98.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC----------CC------C----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----------FP------T---------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----------~~------~---------------- 55 (176)
.+|+||||||+||||++|+++|+ ++|++|++++|+..... .. +
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 76 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLL-----EKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQP 76 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCC
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCC
Confidence 45799999999999999999999 68999999999754210 00 0
Q ss_pred Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-cEEEEeccceeecccccCCCccCCCCCCCccc
Q 030483 56 ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL-RHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 56 ~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v-~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~ 122 (176)
+.| ..++.+.+++|+.++.+++++|.+. ++ ++|+++||..+||.. ...|+
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-----~~~~~iv~~SS~~vyg~~------------~~~~~ 139 (345)
T 2z1m_A 77 DEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-----KPDTKFYQASTSEMFGKV------------QEIPQ 139 (345)
T ss_dssp SEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-----CTTCEEEEEEEGGGGCSC------------SSSSB
T ss_pred CEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCceEEEEechhhcCCC------------CCCCC
Confidence 111 2345677899999999999999987 44 799999999999843 13578
Q ss_pred cCCCCCCCCCcchHHHH-----HHHHh--hCCCceEEEeccCceEeCCC
Q 030483 123 KEDSSRLPFPNFYYELE-----DVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 123 ~E~~~~~~~~~~y~~~e-----~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+|+++.. +...|... .++.. ...+++++++|+.++|||+.
T Consensus 140 ~e~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~ 186 (345)
T 2z1m_A 140 TEKTPFY--PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLR 186 (345)
T ss_dssp CTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred CccCCCC--CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCC
Confidence 8887754 33334433 33332 34579999999999999986
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=142.83 Aligned_cols=131 Identities=11% Similarity=-0.036 Sum_probs=97.1
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-C--------------------CCcc--------c
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-P--------------------TALV--------Q 59 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~--------------------~~~v--------~ 59 (176)
+|+||||||+||||++|+++|+ +.|++|++++|++..... . .+.| .
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~ 76 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLG-----TLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVE 76 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGG-----GTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSC
T ss_pred CceEEEECCCCHHHHHHHHHHH-----hCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCC
Confidence 4689999999999999999999 689999999998643110 0 0111 2
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHH--
Q 030483 60 ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE-- 137 (176)
Q Consensus 60 ~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~-- 137 (176)
.++...+++|+.++.++++++.+. ++++|+++||..+|+... ...|++|+++..+ ...|..
T Consensus 77 ~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~~~~~~~-----------~~~~~~E~~~~~~-~~~Y~~sK 139 (267)
T 3ay3_A 77 RPWNDILQANIIGAYNLYEAARNL-----GKPRIVFASSNHTIGYYP-----------RTTRIDTEVPRRP-DSLYGLSK 139 (267)
T ss_dssp CCHHHHHHHTHHHHHHHHHHHHHT-----TCCEEEEEEEGGGSTTSB-----------TTSCBCTTSCCCC-CSHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCCHHHhCCCC-----------CCCCCCCCCCCCC-CChHHHHH
Confidence 345678899999999999999886 578999999999997421 1357899987652 233422
Q ss_pred --HHHHHHh--hCCCceEEEeccCceEe
Q 030483 138 --LEDVSAS--YSPAITYSVHRSSVIIG 161 (176)
Q Consensus 138 --~e~~~~~--~~~g~~~~ivRp~~v~G 161 (176)
.|.++.. +..+++++++||+++|+
T Consensus 140 ~~~e~~~~~~~~~~gi~~~~lrp~~v~~ 167 (267)
T 3ay3_A 140 CFGEDLASLYYHKFDIETLNIRIGSCFP 167 (267)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEECBCSS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeceeecC
Confidence 2333332 36789999999999984
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-19 Score=146.29 Aligned_cols=133 Identities=20% Similarity=0.256 Sum_probs=95.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCC-CcEEEEEecCCCCC-----CC---------CC------------Ccc----
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPPG-----WF---------PT------------ALV---- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~~-----~~---------~~------------~~v---- 58 (176)
|+|||||||||||++|+++|+ +. |++|++++|+.... .. .+ +.|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~-----~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A 75 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLL-----REDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV 75 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHH-----HSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred CeEEEECCCcHHHHHHHHHHH-----HhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcc
Confidence 489999999999999999999 55 89999999975321 00 00 001
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCC-
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL- 129 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~- 129 (176)
..++.+.+++|+.++.++++++.+. + ++||++||..+||... ..+++|+++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~-~~~v~~SS~~v~g~~~------------~~~~~e~~~~~~ 137 (345)
T 2bll_A 76 AIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-----R-KRIIFPSTSEVYGMCS------------DKYFDEDHSNLI 137 (345)
T ss_dssp CCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-----T-CEEEEECCGGGGBTCC------------CSSBCTTTCCCB
T ss_pred cccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-----C-CeEEEEecHHHcCCCC------------CCCcCCcccccc
Confidence 1234567889999999999999887 4 7899999999997431 34677876531
Q ss_pred --C--CCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 130 --P--FPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 130 --~--~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
| .|...|.. |.++.+ +..+++++++||++||||+..
T Consensus 138 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~ 184 (345)
T 2bll_A 138 VGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 184 (345)
T ss_dssp CCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCC
T ss_pred cCcccCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcc
Confidence 1 12334443 333332 245899999999999999864
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=154.22 Aligned_cols=133 Identities=15% Similarity=0.169 Sum_probs=97.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----CC----------CCCcc-------------cCc
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WF----------PTALV-------------QES 61 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~----------~~~~v-------------~~~ 61 (176)
+|+|||||||||||++|+++|+ +.||+|++++|+.... +. ..+.| ...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~-----~~G~~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~A~~~~~~~~~~~~ 221 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQ-----TGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGEPIFGRFNDSH 221 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEECCCC-----CCGGG
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCCCCccceeecccchhHHhcCCCCEEEECCCCccccccchhH
Confidence 4689999999999999999999 6899999999986531 10 01111 123
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHH---
Q 030483 62 EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL--- 138 (176)
Q Consensus 62 ~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~--- 138 (176)
+...+++|+.++.++++++.+. .++++||++||+.+||... ...+++|+++. +..+|..
T Consensus 222 ~~~~~~~Nv~gt~~ll~a~a~~----~~~~r~V~~SS~~vyg~~~-----------~~~~~~E~~~~---~~~~y~~~~~ 283 (516)
T 3oh8_A 222 KEAIRESRVLPTKFLAELVAES----TQCTTMISASAVGFYGHDR-----------GDEILTEESES---GDDFLAEVCR 283 (516)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHC----SSCCEEEEEEEGGGGCSEE-----------EEEEECTTSCC---CSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc----CCCCEEEEeCcceEecCCC-----------CCCccCCCCCC---CcChHHHHHH
Confidence 4567899999999999995443 2678999999999997211 14678898875 3333432
Q ss_pred --HHHHHh-hCCCceEEEeccCceEeCCC
Q 030483 139 --EDVSAS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 139 --e~~~~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
|+++.. ...|++++|+||++||||+.
T Consensus 284 ~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~ 312 (516)
T 3oh8_A 284 DWEHATAPASDAGKRVAFIRTGVALSGRG 312 (516)
T ss_dssp HHHHTTHHHHHTTCEEEEEEECEEEBTTB
T ss_pred HHHHHHHHHHhCCCCEEEEEeeEEECCCC
Confidence 333222 45789999999999999974
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.7e-19 Score=142.68 Aligned_cols=133 Identities=14% Similarity=0.079 Sum_probs=94.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------CCC----------------------CC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------WFP----------------------TA 56 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~----------------------~~ 56 (176)
|+||||||+||||++|+++|+ +.|++|++++|..... ... .+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D 75 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLL-----QNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAID 75 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCS
T ss_pred CEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCC
Confidence 479999999999999999999 7899999998642110 000 01
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
.| ..++.+.+++|+.++.++++++++. ++++||++||..+||.+ ...|++|
T Consensus 76 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~SS~~~~g~~------------~~~~~~e 138 (338)
T 1udb_A 76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNFIFSSSATVYGDN------------PKIPYVE 138 (338)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSC------------CSSSBCT
T ss_pred EEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-----CCCeEEEEccHHHhCCC------------CCCCcCc
Confidence 11 1134557899999999999999887 57899999999999743 1457888
Q ss_pred CCCCCCCCcchHH----HHHHHHh--hCC-CceEEEeccCceEeCCC
Q 030483 125 DSSRLPFPNFYYE----LEDVSAS--YSP-AITYSVHRSSVIIGASP 164 (176)
Q Consensus 125 ~~~~~~~~~~y~~----~e~~~~~--~~~-g~~~~ivRp~~v~G~~~ 164 (176)
+++..+....|.. .|.++.+ ... +++++++||+++|||.+
T Consensus 139 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~ 185 (338)
T 1udb_A 139 SFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHP 185 (338)
T ss_dssp TSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCT
T ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCc
Confidence 8775432234432 2333333 233 79999999999999954
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3e-19 Score=144.41 Aligned_cols=137 Identities=12% Similarity=0.115 Sum_probs=93.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC---------CCC------------CC-----------C
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP---------GWF------------PT-----------A 56 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~---------~~~------------~~-----------~ 56 (176)
+++||||||+||||++|+++|+ ++||+|++++|+... ... .+ +
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 79 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLL-----ERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCT 79 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCS
T ss_pred CCEEEEECCchHHHHHHHHHHH-----HCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCC
Confidence 4789999999999999999999 799999999987531 000 00 1
Q ss_pred cc----------cCcH-HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee-ecccccCCCccCCCCCCCccccC
Q 030483 57 LV----------QESE-EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH-YMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 57 ~v----------~~~~-~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~-yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
.| ..++ .+.+++|+.++.+++++|.+. . .+++||++||..+ |+.+. ...+++|
T Consensus 80 ~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~---~-~~~riV~~SS~~~~~~~~~-----------~~~~~~E 144 (337)
T 2c29_D 80 GVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA---K-TVRRLVFTSSAGTVNIQEH-----------QLPVYDE 144 (337)
T ss_dssp EEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHH---S-CCCEEEEECCGGGTSCSSS-----------CCSEECT
T ss_pred EEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhC---C-CccEEEEeeeHhhcccCCC-----------CCcccCc
Confidence 11 1123 347899999999999999987 2 3789999999874 44211 1245777
Q ss_pred CCCCCC-------CCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCCC
Q 030483 125 DSSRLP-------FPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 125 ~~~~~~-------~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~ 165 (176)
+++... .+.+.|...|...| +.++++++++||++||||...
T Consensus 145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~ 199 (337)
T 2c29_D 145 SCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIM 199 (337)
T ss_dssp TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSC
T ss_pred ccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence 753210 12333544443332 245899999999999999753
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.8e-19 Score=144.58 Aligned_cols=143 Identities=13% Similarity=0.020 Sum_probs=94.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------------C-----C-C-------------CCc
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------------W-----F-P-------------TAL 57 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------~-----~-~-------------~~~ 57 (176)
|+|||||||||||++|+++|+ +.|++|++++|..... . . . .+.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 76 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFAL-----SQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDS 76 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred cEEEEeCCCchhHHHHHHHHH-----hCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCE
Confidence 589999999999999999999 6899999998742110 0 0 0 011
Q ss_pred c------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-EEEEeccceeecccccCCCccCC----CCCCCc
Q 030483 58 V------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLR-HVALLTGTKHYMGPIFDPSLAGQ----LMPYEV 120 (176)
Q Consensus 58 v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~-~vv~~Ss~~~yg~~~~d~~~~g~----~~~~~~ 120 (176)
| ..++.+.+++|+.++.+++++|.+. .++ +||++||..+||........... ......
T Consensus 77 vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-----~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~ 151 (347)
T 1orr_A 77 CFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-----NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPN 151 (347)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-----CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTT
T ss_pred EEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCceEEEeccHHHhCCCCcCCccccccccccccccc
Confidence 1 1245667899999999999999987 354 89999999999843100000000 000012
Q ss_pred cccCCCCCCCCCcchHHHH-----HHHHh--hCCCceEEEeccCceEeCCC
Q 030483 121 PFKEDSSRLPFPNFYYELE-----DVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 121 p~~E~~~~~~~~~~y~~~e-----~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+++|+++.. +...|... .++.+ ...+++++++||++||||..
T Consensus 152 ~~~e~~~~~--~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~ 200 (347)
T 1orr_A 152 GYDESTQLD--FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQ 200 (347)
T ss_dssp CBCTTSCCC--CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTC
T ss_pred CccccCCCC--CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCC
Confidence 466766543 33334433 33333 23589999999999999975
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.3e-19 Score=146.93 Aligned_cols=141 Identities=14% Similarity=0.077 Sum_probs=98.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC-------------------------C--------CCC-
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-------------------------P--------GWF- 53 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~-------------------------~--------~~~- 53 (176)
.+++|||||||||||++|+++|+ ..|++|++++|+.. . ...
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~ 142 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQ-----GYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM 142 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHT-----TTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---
T ss_pred CCCEEEEecCCcHHHHHHHHHHH-----cCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCc
Confidence 45789999999999999999998 79999999999876 0 000
Q ss_pred -------CCCcc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCC
Q 030483 54 -------PTALV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 117 (176)
Q Consensus 54 -------~~~~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~ 117 (176)
..+.| ..++.+.+++|+.++.+++++|.+. +++|+++||..+ |... . +. .
T Consensus 143 ~~l~~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~------~~~~v~~SS~~~-G~~~----~-~~--~ 208 (427)
T 4f6c_A 143 DDVVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQH------HARLIYVSTISV-GTYF----D-ID--T 208 (427)
T ss_dssp CCCCCSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHT------TCEEEEEEEGGG-GSEE----C-SS--C
T ss_pred ccCCCcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhc------CCcEEEECchHh-CCCc----c-CC--C
Confidence 01111 2345668899999999999999874 578999999888 5321 0 10 1
Q ss_pred CCccccCCCCCCC-CCcchHHHHHHH-----Hh-hCCCceEEEeccCceEeCCCCCC
Q 030483 118 YEVPFKEDSSRLP-FPNFYYELEDVS-----AS-YSPAITYSVHRSSVIIGASPRSL 167 (176)
Q Consensus 118 ~~~p~~E~~~~~~-~~~~y~~~e~~~-----~~-~~~g~~~~ivRp~~v~G~~~~~~ 167 (176)
...|++|+++..+ .+...|...|+. .+ ...|++++++||++|||+.....
T Consensus 209 ~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~ 265 (427)
T 4f6c_A 209 EDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRW 265 (427)
T ss_dssp SCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCC
T ss_pred CCccccccccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCc
Confidence 3568999987432 233445444433 33 34789999999999999987544
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=6.5e-19 Score=142.40 Aligned_cols=132 Identities=14% Similarity=0.111 Sum_probs=94.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC------CC----------------------CCcc-
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FP----------------------TALV- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------~~----------------------~~~v- 58 (176)
.+|+||||||+||||++|+++|+ +.|++|++++|+..... .. .+.|
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vi 93 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWL-----PQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVV 93 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHG-----GGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEE
Confidence 46899999999999999999999 68999999999643210 00 0011
Q ss_pred -------c-C-cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCC
Q 030483 59 -------Q-E-SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL 129 (176)
Q Consensus 59 -------~-~-~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~ 129 (176)
. . ...+ +++|+.++.++++++.+. ++++||++||..+|+... + ...|++|++ .
T Consensus 94 h~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~-----~~~~iV~~SS~~~~~~~~------~----~~~~~~E~~--~ 155 (330)
T 2pzm_A 94 HSAAAYKDPDDWAED-AATNVQGSINVAKAASKA-----GVKRLLNFQTALCYGRPA------T----VPIPIDSPT--A 155 (330)
T ss_dssp ECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHH-----TCSEEEEEEEGGGGCSCS------S----SSBCTTCCC--C
T ss_pred ECCccCCCccccChh-HHHHHHHHHHHHHHHHHc-----CCCEEEEecCHHHhCCCc------c----CCCCcCCCC--C
Confidence 1 0 1122 789999999999999987 578999999999987321 0 012788887 2
Q ss_pred CCCcchHHHHHHHHh---hCCCceEEEeccCceEeCCC
Q 030483 130 PFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 130 ~~~~~y~~~e~~~~~---~~~g~~~~ivRp~~v~G~~~ 164 (176)
+...|...|...| +..+++++++||+++|||+.
T Consensus 156 --~~~~Y~~sK~~~e~~~~~~~~~~~~iR~~~v~gp~~ 191 (330)
T 2pzm_A 156 --PFTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRL 191 (330)
T ss_dssp --CCSHHHHHHHHHHHHHHTCSSCEEEEEECEEECTTC
T ss_pred --CCChHHHHHHHHHHHHHHcCCCEEEEeeeeeECcCC
Confidence 2334544444433 34489999999999999985
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.1e-19 Score=140.44 Aligned_cols=132 Identities=19% Similarity=0.221 Sum_probs=91.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-------------------CCCCcc---cCcHHHH
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------------------FPTALV---QESEEVN 65 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------------------~~~~~v---~~~~~~~ 65 (176)
|+|+|||||| ||||++|+++|+ ++||+|++++|++.... .+.+.| .....
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~~~-- 75 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALA-----PQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTAPDS-- 75 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHG-----GGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCCCBT--
T ss_pred CcCcEEEECC-cHHHHHHHHHHH-----HCCCEEEEEEcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCCccc--
Confidence 4579999998 999999999999 68999999999864310 001111 00000
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh-
Q 030483 66 IFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS- 144 (176)
Q Consensus 66 ~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~- 144 (176)
.....+.++++++++. ..++++|+++||..+||.. ...|++|+++.. |...|...|+..|
T Consensus 76 --~~~~~~~~l~~a~~~~---~~~~~~~v~~Ss~~vyg~~------------~~~~~~E~~~~~--p~~~Y~~sK~~~E~ 136 (286)
T 3ius_A 76 --GGDPVLAALGDQIAAR---AAQFRWVGYLSTTAVYGDH------------DGAWVDETTPLT--PTAARGRWRVMAEQ 136 (286)
T ss_dssp --TBCHHHHHHHHHHHHT---GGGCSEEEEEEEGGGGCCC------------TTCEECTTSCCC--CCSHHHHHHHHHHH
T ss_pred --cccHHHHHHHHHHHhh---cCCceEEEEeecceecCCC------------CCCCcCCCCCCC--CCCHHHHHHHHHHH
Confidence 0012357899999884 2368899999999999843 246889998865 3444555444443
Q ss_pred --hC-CCceEEEeccCceEeCCCCC
Q 030483 145 --YS-PAITYSVHRSSVIIGASPRS 166 (176)
Q Consensus 145 --~~-~g~~~~ivRp~~v~G~~~~~ 166 (176)
.. .+++++++||+++|||+...
T Consensus 137 ~~~~~~~~~~~ilRp~~v~G~~~~~ 161 (286)
T 3ius_A 137 QWQAVPNLPLHVFRLAGIYGPGRGP 161 (286)
T ss_dssp HHHHSTTCCEEEEEECEEEBTTBSS
T ss_pred HHHhhcCCCEEEEeccceECCCchH
Confidence 23 48999999999999998643
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.4e-19 Score=141.94 Aligned_cols=129 Identities=11% Similarity=0.077 Sum_probs=96.5
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCCCCC---------C--------------CC-----CCcc---
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPG---------W--------------FP-----TALV--- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~---------~--------------~~-----~~~v--- 58 (176)
+|||||||||||++|+++|+ +.| ++|++++|..... . .. .+.|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~-----~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALN-----DKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHE 75 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHH-----TTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHH-----HCCCcEEEEEccCCCCchhhhcCcceeccccccHHHHHHHHhccccCCCcEEEEC
Confidence 58999999999999999999 688 9999999875421 0 00 1111
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCC
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF 131 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~ 131 (176)
..++.+.+++|+.++.++++++.+. ++ +|+++||..+||.. ...|++|+++..
T Consensus 76 a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~v~g~~------------~~~~~~E~~~~~-- 135 (310)
T 1eq2_A 76 GACSSTTEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYGGR------------TSDFIESREYEK-- 135 (310)
T ss_dssp CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEEGGGGTTC------------CSCBCSSGGGCC--
T ss_pred cccccCcccCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEeeHHHhCCC------------CCCCCCCCCCCC--
Confidence 2356778999999999999999987 56 89999999999742 134788888654
Q ss_pred CcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 132 PNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 132 ~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
|...|.. |.++.+ ...+++++++||++||||..
T Consensus 136 p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~ 175 (310)
T 1eq2_A 136 PLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPRE 175 (310)
T ss_dssp CSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSC
T ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCC
Confidence 3333433 444433 35689999999999999985
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.7e-19 Score=142.47 Aligned_cols=130 Identities=12% Similarity=0.054 Sum_probs=94.3
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCC--CcEEEEEecCCCCCC---------C------------CCCcc---------
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPPGW---------F------------PTALV--------- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~~~---------~------------~~~~v--------- 58 (176)
+||||||+||||++|+++|+ +. |++|++++|+..... . ..+.|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~-----~~~~g~~V~~~~r~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 75 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLA-----EKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSA 75 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHH-----HHHCGGGEEEEESSCCCCTTCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH
T ss_pred CEEEEcCCcHHHHHHHHHHH-----HhcCCCEEEEecCCCccccCceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCC
Confidence 58999999999999999999 56 899999998754310 0 00111
Q ss_pred --cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchH
Q 030483 59 --QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYY 136 (176)
Q Consensus 59 --~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~ 136 (176)
..++.+.+++|+.++.++++++.+. ++++|+++||..+|+... ...+.+|+++.. |...|
T Consensus 76 ~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~-----------~~~~~~e~~~~~--p~~~Y 137 (317)
T 3ajr_A 76 KGEKDPALAYKVNMNGTYNILEAAKQH-----RVEKVVIPSTIGVFGPET-----------PKNKVPSITITR--PRTMF 137 (317)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGCCTTS-----------CSSSBCSSSCCC--CCSHH
T ss_pred ccccChHHHhhhhhHHHHHHHHHHHHc-----CCCEEEEecCHHHhCCCC-----------CCCCccccccCC--CCchH
Confidence 1234567899999999999999987 578999999999997421 124667777654 33334
Q ss_pred HHH-----HHHHh--hCCCceEEEeccCceEeCC
Q 030483 137 ELE-----DVSAS--YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 137 ~~e-----~~~~~--~~~g~~~~ivRp~~v~G~~ 163 (176)
... .++.. +..+++++++||+.+||+.
T Consensus 138 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~ 171 (317)
T 3ajr_A 138 GVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYK 171 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSS
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccC
Confidence 433 33332 3458999999999999975
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4.2e-19 Score=145.91 Aligned_cols=133 Identities=19% Similarity=0.123 Sum_probs=97.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------C--------C-CC----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------W--------F-PT---------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~--------~-~~---------------- 55 (176)
|+++||||||+||||++|+++|+ +.|++|++++|+.... . . ..
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 101 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLL-----GKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRW 101 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHH
T ss_pred hCCeEEEEcCCchHHHHHHHHHH-----HCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHH
Confidence 44789999999999999999999 6899999999975420 0 0 00
Q ss_pred ------Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-----EEEEeccceeecccccCCCcc
Q 030483 56 ------ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLR-----HVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 56 ------~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~-----~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
+.| ..++...+++|+.++.+++++|.+. +++ +||++||..+||..
T Consensus 102 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-----~~~~~~~~~~v~~SS~~vyg~~------- 169 (381)
T 1n7h_A 102 IDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-----TIDSGRTVKYYQAGSSEMFGST------- 169 (381)
T ss_dssp HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-----HHHHCCCCEEEEEEEGGGGTTS-------
T ss_pred HHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-----CCccCCccEEEEeCcHHHhCCC-------
Confidence 111 1234567899999999999999987 455 99999999999743
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHHHHHH-----Hh--hCCCceEEEeccCceEeCCCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYELEDVS-----AS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~-----~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.. |++|+++.. |...|...|+. .. ...+++++++|++++|||+..
T Consensus 170 -----~~-~~~E~~~~~--~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~ 221 (381)
T 1n7h_A 170 -----PP-PQSETTPFH--PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRG 221 (381)
T ss_dssp -----CS-SBCTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred -----CC-CCCCCCCCC--CCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCC
Confidence 13 788988754 33344443333 32 245899999999999999863
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4e-19 Score=146.65 Aligned_cols=131 Identities=19% Similarity=0.165 Sum_probs=90.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC------------------------------CCC------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP------------------------------PGW------ 52 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~------------------------------~~~------ 52 (176)
+++||||||+||||++|+++|+ ++|++|++++|... ...
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~D 85 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLS-----KKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD 85 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred CCeEEEeCCCcHHHHHHHHHHH-----hCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECC
Confidence 4689999999999999999999 68999999987421 000
Q ss_pred -CC------------CCcc------------cCcHH---HHHHHHHHHHHHHHHHHHhcCCCCCCc-cEEEEeccceeec
Q 030483 53 -FP------------TALV------------QESEE---VNIFKNSTMLKNVLSVLVSSNSGRSRL-RHVALLTGTKHYM 103 (176)
Q Consensus 53 -~~------------~~~v------------~~~~~---~~~~~N~~~t~~ll~a~~~~~~~~~~v-~~vv~~Ss~~~yg 103 (176)
.. .+.| ..++. ..+++|+.++.+++++|.+. ++ ++||++||..+||
T Consensus 86 l~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-----~~~~~~V~~SS~~vyg 160 (404)
T 1i24_A 86 ICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-----GEECHLVKLGTMGEYG 160 (404)
T ss_dssp TTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-----CTTCEEEEECCGGGGC
T ss_pred CCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-----CCCcEEEEeCcHHHhC
Confidence 00 0111 11222 36789999999999999987 34 5999999999997
Q ss_pred ccccCCCccCCCCCCCccccCC--------------CCCCCCCcchHHHHHHH-----Hh--hCCCceEEEeccCceEeC
Q 030483 104 GPIFDPSLAGQLMPYEVPFKED--------------SSRLPFPNFYYELEDVS-----AS--YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 104 ~~~~d~~~~g~~~~~~~p~~E~--------------~~~~~~~~~y~~~e~~~-----~~--~~~g~~~~ivRp~~v~G~ 162 (176)
.. ..|++|+ .+. .|...|...|+. .+ ...+++++++||++||||
T Consensus 161 ~~-------------~~~~~E~~~~~~~~~~~~~~~~~~--~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp 225 (404)
T 1i24_A 161 TP-------------NIDIEEGYITITHNGRTDTLPYPK--QASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGV 225 (404)
T ss_dssp CC-------------SSCBCSSEEEEEETTEEEEEECCC--CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECS
T ss_pred CC-------------CCCCCccccccccccccccccCCC--CCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCC
Confidence 42 1345554 232 233344443333 22 234899999999999999
Q ss_pred CC
Q 030483 163 SP 164 (176)
Q Consensus 163 ~~ 164 (176)
+.
T Consensus 226 ~~ 227 (404)
T 1i24_A 226 KT 227 (404)
T ss_dssp CC
T ss_pred CC
Confidence 75
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.7e-19 Score=142.47 Aligned_cols=135 Identities=13% Similarity=0.044 Sum_probs=98.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-------cEEEEEecCCCCCC----C---------------------CC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-------WKVYGAARRPPPGW----F---------------------PT 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-------~~V~~l~R~~~~~~----~---------------------~~ 55 (176)
++|+||||||+||||++|+++|+ +.| ++|++++|+..... . ..
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~-----~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 87 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLV-----KDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARP 87 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHH-----HHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCC
T ss_pred cCCEEEEECCCcHHHHHHHHHHH-----hcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCC
Confidence 46799999999999999999999 688 89999999753210 0 00
Q ss_pred Ccc-----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCC---CccEEEEeccceeecccccCCCccCCCCCCCcc
Q 030483 56 ALV-----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRS---RLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 56 ~~v-----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~---~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p 121 (176)
+.| ..++.+.+++|+.++.++++++.+. .. .+++||++||..+|+.. ...|
T Consensus 88 d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~---~~~~~~~~~iv~~SS~~~~~~~------------~~~~ 152 (342)
T 2hrz_A 88 DVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIA---NGKDGYKPRVVFTSSIAVFGAP------------LPYP 152 (342)
T ss_dssp SEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---HHHHCCCCEEEEEEEGGGCCSS------------CCSS
T ss_pred CEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhc---ccccCCCcEEEEeCchHhhCCC------------CCCC
Confidence 111 1244567899999999999999886 20 16899999999999742 1357
Q ss_pred ccCCCCCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEe-CCC
Q 030483 122 FKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIG-ASP 164 (176)
Q Consensus 122 ~~E~~~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G-~~~ 164 (176)
++|+++.. +...|.. |.++.+ ...+++++++|++++|| |+.
T Consensus 153 ~~E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~ 201 (342)
T 2hrz_A 153 IPDEFHTT--PLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGK 201 (342)
T ss_dssp BCTTCCCC--CSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSS
T ss_pred cCCCCCCC--CcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCC
Confidence 89998764 3333443 444433 35679999999999999 654
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.79 E-value=7.6e-19 Score=150.06 Aligned_cols=141 Identities=14% Similarity=0.067 Sum_probs=98.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-------------------------C--------CC--
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-------------------------G--------WF-- 53 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-------------------------~--------~~-- 53 (176)
.++|||||||||||++|+++|+ +.|++|++++|+... . ..
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~-----~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 224 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQ-----GYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD 224 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTB-----TTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCS
T ss_pred CCeEEEECCccchHHHHHHHHH-----hcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccc
Confidence 4789999999999999999998 799999999998661 0 00
Q ss_pred ------CCCcc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 54 ------PTALV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 54 ------~~~~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
..+.| ..+..+..++|+.++.+++++|.+. +++|+|+||..+ |... ... ..
T Consensus 225 ~l~~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~------~~~~v~iSS~~v-G~~~----~~~---~~ 290 (508)
T 4f6l_B 225 DVVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQH------HARLIYVSTISV-GTYF----DID---TE 290 (508)
T ss_dssp SCCCSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTT------TCEEEEEEESCT-TSEE----CTT---CS
T ss_pred cCCCccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhC------CCcEEEeCChhh-ccCC----ccC---Cc
Confidence 00111 2244567889999999999999874 478999999888 4211 000 12
Q ss_pred CccccCCCCCCC-CCcchHHH-----HHHHHh-hCCCceEEEeccCceEeCCCCCCC
Q 030483 119 EVPFKEDSSRLP-FPNFYYEL-----EDVSAS-YSPAITYSVHRSSVIIGASPRSLY 168 (176)
Q Consensus 119 ~~p~~E~~~~~~-~~~~y~~~-----e~~~~~-~~~g~~~~ivRp~~v~G~~~~~~~ 168 (176)
..|++|+++..+ .+...|.. |+++.+ ...|++++|+||++|||++....+
T Consensus 291 ~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~ 347 (508)
T 4f6l_B 291 DVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWH 347 (508)
T ss_dssp CCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCC
T ss_pred CcccccccccccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcc
Confidence 568899887431 23333443 444443 347999999999999999876553
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.3e-18 Score=138.71 Aligned_cols=141 Identities=18% Similarity=0.135 Sum_probs=96.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC-----------------------CCCC---------CC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-----------------------PGWF---------PT 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~-----------------------~~~~---------~~ 55 (176)
++++||||||+||||++|+++|+ +.||+|++++|+.. +... ..
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~ 84 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLL-----EHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA 84 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC
T ss_pred CCCEEEEECCccHHHHHHHHHHH-----HCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCC
Confidence 46899999999999999999999 68999999998621 0000 00
Q ss_pred Ccc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCC
Q 030483 56 ALV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 126 (176)
Q Consensus 56 ~~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~ 126 (176)
+.| ..++.+.+++|+.++.+++++|.+. .++++||++||..+|+.+.. +. ...|++|++
T Consensus 85 d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~----~~~~~iv~~SS~~~~~~~~~-----~~---~~~~~~E~~ 152 (342)
T 1y1p_A 85 AGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAAT----PSVKRFVLTSSTVSALIPKP-----NV---EGIYLDEKS 152 (342)
T ss_dssp SEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTC----TTCCEEEEECCGGGTCCCCT-----TC---CCCEECTTC
T ss_pred CEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhC----CCCcEEEEeccHHHhcCCCC-----CC---CCcccCccc
Confidence 111 2356778999999999999999853 15789999999988863210 00 125788886
Q ss_pred CC-----------C---CCCcchHHHHHHH-----Hh----hCCCceEEEeccCceEeCCCC
Q 030483 127 SR-----------L---PFPNFYYELEDVS-----AS----YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 127 ~~-----------~---~~~~~y~~~e~~~-----~~----~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.. . ..+...|...|+. .. ...+++++++||++||||...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~ 214 (342)
T 1y1p_A 153 WNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFD 214 (342)
T ss_dssp CCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSC
T ss_pred cCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCC
Confidence 21 0 1123334444333 22 123789999999999999763
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-18 Score=142.01 Aligned_cols=132 Identities=23% Similarity=0.141 Sum_probs=95.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----C-----------CC------C-------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----W-----------FP------T------------- 55 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~-----------~~------~------------- 55 (176)
|+||||||+||||++|+++|+ +.|++|++++|+.... . .. +
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLL-----EKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILRE 76 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH-----HCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHh
Confidence 689999999999999999999 6899999999874320 0 00 0
Q ss_pred ---Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCc---cEEEEeccceeecccccCCCccCCCCC
Q 030483 56 ---ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL---RHVALLTGTKHYMGPIFDPSLAGQLMP 117 (176)
Q Consensus 56 ---~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v---~~vv~~Ss~~~yg~~~~d~~~~g~~~~ 117 (176)
+.| .+++...+++|+.++.++++++.+. ++ ++||++||..+||..
T Consensus 77 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~~iv~~SS~~v~g~~------------ 139 (372)
T 1db3_A 77 VQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-----GLEKKTRFYQASTSELYGLV------------ 139 (372)
T ss_dssp HCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-----TCTTTCEEEEEEEGGGGTTC------------
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-----CCCCCcEEEEeCChhhhCCC------------
Confidence 111 1345567899999999999999987 45 799999999999743
Q ss_pred CCccccCCCCCCCCCcchHHHHH-----HHHh--hCCCceEEEeccCceEeCCCC
Q 030483 118 YEVPFKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 118 ~~~p~~E~~~~~~~~~~y~~~e~-----~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
...|++|+++.. |...|...| ++.. ...+++++++|++.+|||+.+
T Consensus 140 ~~~~~~E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~ 192 (372)
T 1db3_A 140 QEIPQKETTPFY--PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRG 192 (372)
T ss_dssp CSSSBCTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSC
T ss_pred CCCCCCccCCCC--CCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCC
Confidence 135788988754 333344333 3332 345899999999999999753
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7.1e-19 Score=143.19 Aligned_cols=142 Identities=16% Similarity=0.078 Sum_probs=94.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCC-CcEEEEEecCCCCC-------C---CC----------------------CC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPPG-------W---FP----------------------TA 56 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~~-------~---~~----------------------~~ 56 (176)
|+||||||+||||++|+++|+ +. |++|++++|..... . .. .+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~-----~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 75 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHII-----KNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPD 75 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-----HHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEECCCchHhHHHHHHHH-----hcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCC
Confidence 379999999999999999999 55 79999999864210 0 00 01
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-------EEEEeccceeeccccc-CCCccCCCC
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLR-------HVALLTGTKHYMGPIF-DPSLAGQLM 116 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~-------~vv~~Ss~~~yg~~~~-d~~~~g~~~ 116 (176)
.| ..++.+.+++|+.++.+++++|.+. -.+++ +||++||..+||.... +.. ...
T Consensus 76 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~-~~~-- 149 (361)
T 1kew_A 76 AVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKY---WSALGEDKKNNFRFHHISTDEVYGDLPHPDEV-ENS-- 149 (361)
T ss_dssp EEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHH---HHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGS-CTT--
T ss_pred EEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHh---ccCcccccccCceEEEeCCHHHhCCCcccccc-ccc--
Confidence 11 1234567899999999999999875 11344 9999999999974210 000 000
Q ss_pred CCCccccCCCCCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 117 PYEVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 117 ~~~~p~~E~~~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
....|++|+++.. +...|.. |.++.. .+.+++++++||++||||..
T Consensus 150 ~~~~~~~E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~ 202 (361)
T 1kew_A 150 VTLPLFTETTAYA--PSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYH 202 (361)
T ss_dssp SCCCCBCTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC
T ss_pred ccCCCCCCCCCCC--CCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCC
Confidence 0112788888754 3333443 333333 23589999999999999985
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.7e-18 Score=136.14 Aligned_cols=137 Identities=15% Similarity=0.117 Sum_probs=91.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec-CCCC---C-----CC----------CC--------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR-RPPP---G-----WF----------PT-------------- 55 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R-~~~~---~-----~~----------~~-------------- 55 (176)
+|+||||||+||||++|+++|+ ++|++|++++| ++.. . .. .+
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 75 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLL-----ENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGC 75 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTC
T ss_pred CCEEEEECChhHHHHHHHHHHH-----HCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCC
Confidence 4789999999999999999999 79999999998 4311 0 00 00
Q ss_pred Ccc---c-------Cc-HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee-cccccCCCccCCCCCCCcccc
Q 030483 56 ALV---Q-------ES-EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY-MGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 56 ~~v---~-------~~-~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y-g~~~~d~~~~g~~~~~~~p~~ 123 (176)
+.| . .+ ..+.+++|+.++.+++++|.+. . ++++||++||..+| +.+. ...+++
T Consensus 76 d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~---~-~~~~iV~~SS~~~~~~~~~-----------~~~~~~ 140 (322)
T 2p4h_X 76 VGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNS---K-TVKRFIYTSSGSAVSFNGK-----------DKDVLD 140 (322)
T ss_dssp SEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTC---S-SCCEEEEEEEGGGTSCSSS-----------CCSEEC
T ss_pred CEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhc---C-CccEEEEeccHHHcccCCC-----------CCeecC
Confidence 011 0 11 1247899999999999999875 2 47899999997644 3210 134677
Q ss_pred CCCCCCC------CC-cchHHHHHHH-----Hh--hCCCceEEEeccCceEeCCCC
Q 030483 124 EDSSRLP------FP-NFYYELEDVS-----AS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 124 E~~~~~~------~~-~~y~~~e~~~-----~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
|+++... .| .+.|...|.+ .+ +.++++++++||++||||...
T Consensus 141 e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~ 196 (322)
T 2p4h_X 141 ESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVC 196 (322)
T ss_dssp TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCS
T ss_pred CccccchhhhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCC
Confidence 8764210 11 1224443333 33 246899999999999999753
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=4.7e-18 Score=150.18 Aligned_cols=137 Identities=15% Similarity=0.147 Sum_probs=97.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-----------CC----------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FP---------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~---------------------- 54 (176)
++|+||||||+||||++|+++|+ ++|++|++++|+..... ..
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~ 84 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELI-----ENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYK 84 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCC
Confidence 46899999999999999999999 68999999998643210 00
Q ss_pred CCcc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccc
Q 030483 55 TALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 55 ~~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~ 122 (176)
.+.| ...+.+.+++|+.++.+++++|++. ++++||++||..+||.... .. ...|+
T Consensus 85 ~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-----~~~~iV~~SS~~vyg~~~~----~~----~~~~~ 151 (699)
T 1z45_A 85 IDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-----NVSKFVFSSSATVYGDATR----FP----NMIPI 151 (699)
T ss_dssp CCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCCGGG----ST----TCCSB
T ss_pred CCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECcHHHhCCCcc----cc----ccCCc
Confidence 0111 1123467899999999999999887 5789999999999974310 00 12577
Q ss_pred cCCCCCCCCCcchHHH-----HHHHHh--hC--CCceEEEeccCceEeCCC
Q 030483 123 KEDSSRLPFPNFYYEL-----EDVSAS--YS--PAITYSVHRSSVIIGASP 164 (176)
Q Consensus 123 ~E~~~~~~~~~~y~~~-----e~~~~~--~~--~g~~~~ivRp~~v~G~~~ 164 (176)
+|+++.. |...|.. |+++.+ .. .+++++|+||++||||.+
T Consensus 152 ~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~ 200 (699)
T 1z45_A 152 PEECPLG--PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHP 200 (699)
T ss_dssp CTTSCCC--CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCT
T ss_pred cccCCCC--CCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCc
Confidence 8887654 3333433 444333 22 689999999999999875
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.8e-18 Score=138.81 Aligned_cols=133 Identities=15% Similarity=0.093 Sum_probs=91.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---C---CC----------------------CCcc-
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W---FP----------------------TALV- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~---~~----------------------~~~v- 58 (176)
.+|+||||||+||||++|+++|+ +.|++|++++|+.... . .. .+.|
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vi 94 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLL-----ERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVV 94 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHH-----HCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEE
Confidence 45789999999999999999999 6899999999975321 0 00 0111
Q ss_pred ------cC--cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCC
Q 030483 59 ------QE--SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 130 (176)
Q Consensus 59 ------~~--~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~ 130 (176)
.. .....+++|+.++.++++++.+. ++++||++||..+|+... +.. .. |++|++ .
T Consensus 95 h~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~-----~~~~iV~~SS~~~~g~~~------~~~--~~-~~~E~~--~- 157 (333)
T 2q1w_A 95 HTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKN-----NVGRFVYFQTALCYGVKP------IQQ--PV-RLDHPR--N- 157 (333)
T ss_dssp ECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGCSCC------CSS--SB-CTTSCC--C-
T ss_pred ECceecCCCccCChHHHHHHHHHHHHHHHHHHh-----CCCEEEEECcHHHhCCCc------ccC--CC-CcCCCC--C-
Confidence 11 01111889999999999999987 578999999999987210 000 13 788886 2
Q ss_pred CCc-chHHHHHHHHh---hC-CCceEEEeccCceEeCCC
Q 030483 131 FPN-FYYELEDVSAS---YS-PAITYSVHRSSVIIGASP 164 (176)
Q Consensus 131 ~~~-~y~~~e~~~~~---~~-~g~~~~ivRp~~v~G~~~ 164 (176)
|. ..|...|...| +. .. +++++||+++|||+.
T Consensus 158 -p~~~~Y~~sK~~~E~~~~~s~~-~~~ilR~~~v~gp~~ 194 (333)
T 2q1w_A 158 -PANSSYAISKSANEDYLEYSGL-DFVTFRLANVVGPRN 194 (333)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHTC-CEEEEEESEEESTTC
T ss_pred -CCCCchHHHHHHHHHHHHhhhC-CeEEEeeceEECcCC
Confidence 22 34544444433 22 33 899999999999983
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.6e-19 Score=135.37 Aligned_cols=134 Identities=16% Similarity=0.089 Sum_probs=81.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---CC------------------CCcc---cCcHHHH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FP------------------TALV---QESEEVN 65 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---~~------------------~~~v---~~~~~~~ 65 (176)
|+|||||||||||++|+++|+ ++||+|++++|++.... .. .+.| .......
T Consensus 1 MkvlVtGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~ 75 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAK-----NRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDE 75 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTT
T ss_pred CeEEEEcCCchhHHHHHHHHH-----hCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCCccc
Confidence 479999999999999999999 68999999999853210 00 0111 1111223
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCC---CcchHHHHHHH
Q 030483 66 IFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF---PNFYYELEDVS 142 (176)
Q Consensus 66 ~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~---~~~y~~~e~~~ 142 (176)
...|+.++.++++++++. ++++++++||...|.+.. ...+..|+.+..+. .......|.+.
T Consensus 76 ~~~~~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~-----------~~~~~~~~~~~~~~~~y~~~k~~~e~~~ 139 (221)
T 3ew7_A 76 AEKHVTSLDHLISVLNGT-----VSPRLLVVGGAASLQIDE-----------DGNTLLESKGLREAPYYPTARAQAKQLE 139 (221)
T ss_dssp TTSHHHHHHHHHHHHCSC-----CSSEEEEECCCC------------------------------CCCSCCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhc-----CCceEEEEecceEEEcCC-----------CCccccccCCCCCHHHHHHHHHHHHHHH
Confidence 457899999999999886 578999999876654211 12345565553321 11222333331
Q ss_pred Hhh--CCCceEEEeccCceEeCCC
Q 030483 143 ASY--SPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 143 ~~~--~~g~~~~ivRp~~v~G~~~ 164 (176)
... ..+++|+++||+++|||+.
T Consensus 140 ~~~~~~~gi~~~ivrp~~v~g~~~ 163 (221)
T 3ew7_A 140 HLKSHQAEFSWTYISPSAMFEPGE 163 (221)
T ss_dssp HHHTTTTTSCEEEEECSSCCCCC-
T ss_pred HHHhhccCccEEEEeCcceecCCC
Confidence 112 6799999999999999854
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.76 E-value=9.2e-19 Score=148.80 Aligned_cols=135 Identities=16% Similarity=0.106 Sum_probs=95.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCC---CcEEEEEecCCCCC---------------------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGS---PWKVYGAARRPPPG--------------------------------- 51 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~---g~~V~~l~R~~~~~--------------------------------- 51 (176)
.+|+|||||||||||++|+++|+ +. |++|++++|+....
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll-----~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~ 146 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELL-----RRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVA 146 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHH-----HHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----hcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEE
Confidence 45799999999999999999999 56 89999999975310
Q ss_pred -CCC------C-----------Ccc--------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeeccc
Q 030483 52 -WFP------T-----------ALV--------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGP 105 (176)
Q Consensus 52 -~~~------~-----------~~v--------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~ 105 (176)
... + +.| ..++.+.+++|+.++.+++++|.+. ++++|+++||..+|+..
T Consensus 147 ~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----~~~~~V~iSS~~v~~~~ 221 (478)
T 4dqv_A 147 GDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTT-----KLKPFTYVSTADVGAAI 221 (478)
T ss_dssp CCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSS-----SCCCEEEEEEGGGGTTS
T ss_pred eECCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhC-----CCCeEEEEeehhhcCcc
Confidence 000 0 001 1233457889999999999999886 67899999999998742
Q ss_pred ccCCCccCCCCCCCccccCCCCCCC-CC--------cchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 106 IFDPSLAGQLMPYEVPFKEDSSRLP-FP--------NFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 106 ~~d~~~~g~~~~~~~p~~E~~~~~~-~~--------~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
...+++|+++..+ .+ ...|.. |.++.+ ...+++++++||++|||++.
T Consensus 222 ------------~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~ 284 (478)
T 4dqv_A 222 ------------EPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTS 284 (478)
T ss_dssp ------------CTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSS
T ss_pred ------------CCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCc
Confidence 1346777764321 01 112443 333333 23589999999999999865
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.76 E-value=4.3e-18 Score=149.75 Aligned_cols=134 Identities=19% Similarity=0.229 Sum_probs=96.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCC-CcEEEEEecCCCCCC-----CC---------C------------Ccc--
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPPGW-----FP---------T------------ALV-- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~~~-----~~---------~------------~~v-- 58 (176)
++|+|||||||||||++|+++|+ +. |++|++++|+..... .. + +.|
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll-----~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih 388 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLL-----REDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP 388 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHH-----HSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred cCceEEEEcCCcHHHHHHHHHHH-----hcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEE
Confidence 45789999999999999999999 55 899999999754310 00 0 001
Q ss_pred ----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCC
Q 030483 59 ----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR 128 (176)
Q Consensus 59 ----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~ 128 (176)
..++.+.+++|+.++.+++++|.+. + ++||++||..+||.. ...+++|+++.
T Consensus 389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----~-~r~V~~SS~~vyg~~------------~~~~~~E~~~~ 450 (660)
T 1z7e_A 389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-----R-KRIIFPSTSEVYGMC------------SDKYFDEDHSN 450 (660)
T ss_dssp CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-----T-CEEEEECCGGGGBTC------------CSSSBCTTTCC
T ss_pred CceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-----C-CEEEEEecHHHcCCC------------CCcccCCCccc
Confidence 1234567889999999999999987 4 799999999999743 13467888752
Q ss_pred ---CC--CCcchHHHH-----HHHHh--hCCCceEEEeccCceEeCCC
Q 030483 129 ---LP--FPNFYYELE-----DVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 129 ---~~--~~~~y~~~e-----~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
.| .|...|... .++.+ +..+++++++||++||||+.
T Consensus 451 ~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~ 498 (660)
T 1z7e_A 451 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRL 498 (660)
T ss_dssp EEECCTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTS
T ss_pred cccCcccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCc
Confidence 11 233334443 33332 24589999999999999985
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=126.71 Aligned_cols=121 Identities=19% Similarity=0.193 Sum_probs=89.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCCCCC------------------CCcc---------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGWFP------------------TALV--------- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~~~~------------------~~~v--------- 58 (176)
|+|+||||||+||||++|+++|+ ++|+ +|++++|++...... .+.+
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~-----~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~d~vi~~a~~~~~ 78 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRIL-----SEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIK 78 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHH-----HCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSCCSEEEECCCCCHH
T ss_pred CCceEEEECCCcHHHHHHHHHHH-----hCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHhhhcEEEECeeeccc
Confidence 46799999999999999999999 6887 999999986531000 0111
Q ss_pred -cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHH
Q 030483 59 -QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE 137 (176)
Q Consensus 59 -~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~ 137 (176)
..++++.+++|+.++.++++++.+. ++++|+++||..+|+. + ... |.
T Consensus 79 ~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~~~~----------------------~----~~~-y~ 126 (215)
T 2a35_A 79 EAGSEEAFRAVDFDLPLAVGKRALEM-----GARHYLVVSALGADAK----------------------S----SIF-YN 126 (215)
T ss_dssp HHSSHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEECCTTCCTT----------------------C----SSH-HH
T ss_pred cCCCHHHHHHhhHHHHHHHHHHHHHc-----CCCEEEEECCcccCCC----------------------C----ccH-HH
Confidence 1345677899999999999999887 5789999999766531 0 122 33
Q ss_pred HHHHHHh---hCCCce-EEEeccCceEeCCCC
Q 030483 138 LEDVSAS---YSPAIT-YSVHRSSVIIGASPR 165 (176)
Q Consensus 138 ~e~~~~~---~~~g~~-~~ivRp~~v~G~~~~ 165 (176)
..|...| +..+++ ++++||+++|||...
T Consensus 127 ~sK~~~e~~~~~~~~~~~~~vrp~~v~g~~~~ 158 (215)
T 2a35_A 127 RVKGELEQALQEQGWPQLTIARPSLLFGPREE 158 (215)
T ss_dssp HHHHHHHHHHTTSCCSEEEEEECCSEESTTSC
T ss_pred HHHHHHHHHHHHcCCCeEEEEeCceeeCCCCc
Confidence 3343333 356899 999999999999753
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.75 E-value=8.7e-19 Score=133.80 Aligned_cols=133 Identities=13% Similarity=0.126 Sum_probs=87.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC----CC------------------CCcc-----cCcH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FP------------------TALV-----QESE 62 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~------------------~~~v-----~~~~ 62 (176)
|+|||||||||||++|+++|+ ++||+|++++|++.... .. .+.| ....
T Consensus 1 MkilVtGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~ 75 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEAR-----RRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWG 75 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTT
T ss_pred CEEEEEcCCCHHHHHHHHHHH-----HCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCC
Confidence 479999999999999999999 68999999999753210 00 0111 1001
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHH
Q 030483 63 EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVS 142 (176)
Q Consensus 63 ~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~ 142 (176)
.....+|+.++.++++++++. + ++++++||...|.... +. ...+.+|+.. +.|..+|...|..
T Consensus 76 ~~~~~~n~~~~~~l~~a~~~~-----~-~~~v~~SS~~~~~~~~------~~---~~~~~~~~~~--~~~~~~y~~sK~~ 138 (224)
T 3h2s_A 76 SGRGYLHLDFATHLVSLLRNS-----D-TLAVFILGSASLAMPG------AD---HPMILDFPES--AASQPWYDGALYQ 138 (224)
T ss_dssp SSCTHHHHHHHHHHHHTCTTC-----C-CEEEEECCGGGSBCTT------CS---SCGGGGCCGG--GGGSTTHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHc-----C-CcEEEEecceeeccCC------CC---ccccccCCCC--CccchhhHHHHHH
Confidence 123567999999999999887 5 7899999875543211 10 1134444443 2233445443333
Q ss_pred Hh------hCCCceEEEeccCceEeCCC
Q 030483 143 AS------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 143 ~~------~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+ +..+++++++||+++||++.
T Consensus 139 ~e~~~~~~~~~~i~~~ivrp~~v~g~~~ 166 (224)
T 3h2s_A 139 YYEYQFLQMNANVNWIGISPSEAFPSGP 166 (224)
T ss_dssp HHHHHHHTTCTTSCEEEEEECSBCCCCC
T ss_pred HHHHHHHHhcCCCcEEEEcCccccCCCc
Confidence 22 36799999999999999954
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.6e-19 Score=133.63 Aligned_cols=127 Identities=12% Similarity=0.113 Sum_probs=89.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC--C---------CC------------Ccc----cCcH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--F---------PT------------ALV----QESE 62 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~---------~~------------~~v----~~~~ 62 (176)
|+||||||+||||++|+++|+ +.||+|++++|++.... . .+ +.| ....
T Consensus 1 M~ilItGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~ 75 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLS-----TTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG 75 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHT-----TSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT
T ss_pred CeEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC
Confidence 479999999999999999999 68999999999864321 0 01 001 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHH----
Q 030483 63 EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL---- 138 (176)
Q Consensus 63 ~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~---- 138 (176)
...+++|+.++.++++++++. ++++|+++||..+|+ ..+.+| ++. .+...|..
T Consensus 76 ~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~~~~---------------~~~~~e-~~~--~~~~~Y~~sK~~ 132 (219)
T 3dqp_A 76 KSLLKVDLYGAVKLMQAAEKA-----EVKRFILLSTIFSLQ---------------PEKWIG-AGF--DALKDYYIAKHF 132 (219)
T ss_dssp SSCCCCCCHHHHHHHHHHHHT-----TCCEEEEECCTTTTC---------------GGGCCS-HHH--HHTHHHHHHHHH
T ss_pred CCcEeEeHHHHHHHHHHHHHh-----CCCEEEEECcccccC---------------CCcccc-ccc--ccccHHHHHHHH
Confidence 335678999999999999887 578999999865543 234445 221 12333433
Q ss_pred -HHHHHhhCCCceEEEeccCceEeCCCC
Q 030483 139 -EDVSASYSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 139 -e~~~~~~~~g~~~~ivRp~~v~G~~~~ 165 (176)
|+++. +..+++++++||+++||+...
T Consensus 133 ~e~~~~-~~~~i~~~ilrp~~v~g~~~~ 159 (219)
T 3dqp_A 133 ADLYLT-KETNLDYTIIQPGALTEEEAT 159 (219)
T ss_dssp HHHHHH-HSCCCEEEEEEECSEECSCCC
T ss_pred HHHHHH-hccCCcEEEEeCceEecCCCC
Confidence 33332 467999999999999998753
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.1e-18 Score=131.51 Aligned_cols=127 Identities=12% Similarity=0.135 Sum_probs=90.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------C---------C-------CCCcc-----
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------W---------F-------PTALV----- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~---------~-------~~~~v----- 58 (176)
+++|+|||||||||||++|+++|+ ++|++|++++|++... . . ..+.|
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~-----~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag 93 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELK-----NKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAG 93 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCC
T ss_pred cCCCeEEEECCCChHHHHHHHHHH-----hCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCC
Confidence 357899999999999999999999 7899999999985321 0 0 00111
Q ss_pred ---cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcch
Q 030483 59 ---QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFY 135 (176)
Q Consensus 59 ---~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y 135 (176)
..++.+.+++|+.++.++++++++. ++++|+++||...+. + |.++ .+...
T Consensus 94 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~~~~-----------------~--~~~~---~~~~~ 146 (236)
T 3e8x_A 94 SGPHTGADKTILIDLWGAIKTIQEAEKR-----GIKRFIMVSSVGTVD-----------------P--DQGP---MNMRH 146 (236)
T ss_dssp CCTTSCHHHHHHTTTHHHHHHHHHHHHH-----TCCEEEEECCTTCSC-----------------G--GGSC---GGGHH
T ss_pred CCCCCCccccchhhHHHHHHHHHHHHHc-----CCCEEEEEecCCCCC-----------------C--CCCh---hhhhh
Confidence 3467788999999999999999887 578999999832221 1 2221 12333
Q ss_pred HHHHHHHHh---hCCCceEEEeccCceEeCCCC
Q 030483 136 YELEDVSAS---YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 136 ~~~e~~~~~---~~~g~~~~ivRp~~v~G~~~~ 165 (176)
|...|...+ +..+++++++||++++|+...
T Consensus 147 Y~~sK~~~e~~~~~~gi~~~~lrpg~v~~~~~~ 179 (236)
T 3e8x_A 147 YLVAKRLADDELKRSSLDYTIVRPGPLSNEEST 179 (236)
T ss_dssp HHHHHHHHHHHHHHSSSEEEEEEECSEECSCCC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEeCCcccCCCCC
Confidence 443333333 467999999999999999753
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.71 E-value=7.8e-17 Score=126.20 Aligned_cols=125 Identities=16% Similarity=0.131 Sum_probs=92.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-------CCCC-----------CCcc------------c
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-------GWFP-----------TALV------------Q 59 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-------~~~~-----------~~~v------------~ 59 (176)
|+||||||+||||++|+++|+ + |++|++++|++.. .... .+.| .
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-----~-g~~V~~~~r~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~ 74 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-----E-RHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCE 74 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-----T-TSCEEEEESSSCCTTCEECCTTSHHHHHHHHHHHCCSEEEECCCCCCHHHHH
T ss_pred CEEEEECCCChhHHHHHHHHh-----c-CCeEEEecCCCcCCCCceeccCCHHHHHHHHHhcCCCEEEECCcccChhhhh
Confidence 379999999999999999999 4 7999999997621 1000 1111 1
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHH
Q 030483 60 ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELE 139 (176)
Q Consensus 60 ~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e 139 (176)
.++.+.+++|+.++.++++++.+. ++ +|+++||..+|+.. ..+++|+++.. |...|...
T Consensus 75 ~~~~~~~~~n~~~~~~l~~~~~~~-----~~-~iv~~SS~~~~~~~-------------~~~~~e~~~~~--~~~~Y~~s 133 (273)
T 2ggs_A 75 IEKEKAYKINAEAVRHIVRAGKVI-----DS-YIVHISTDYVFDGE-------------KGNYKEEDIPN--PINYYGLS 133 (273)
T ss_dssp HCHHHHHHHHTHHHHHHHHHHHHT-----TC-EEEEEEEGGGSCSS-------------SCSBCTTSCCC--CSSHHHHH
T ss_pred hCHHHHHHHhHHHHHHHHHHHHHh-----CC-eEEEEecceeEcCC-------------CCCcCCCCCCC--CCCHHHHH
Confidence 245667899999999999999886 44 79999999988632 23788888754 34445555
Q ss_pred HHHHh--hCCCceEEEeccCceEeC
Q 030483 140 DVSAS--YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 140 ~~~~~--~~~g~~~~ivRp~~v~G~ 162 (176)
|...| ... ++++++||+.|||+
T Consensus 134 K~~~e~~~~~-~~~~~iR~~~v~G~ 157 (273)
T 2ggs_A 134 KLLGETFALQ-DDSLIIRTSGIFRN 157 (273)
T ss_dssp HHHHHHHHCC-TTCEEEEECCCBSS
T ss_pred HHHHHHHHhC-CCeEEEeccccccc
Confidence 55544 223 88999999999984
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.70 E-value=8.4e-17 Score=124.20 Aligned_cols=120 Identities=16% Similarity=0.121 Sum_probs=86.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCCCC----C--------------------CCcc---
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGWF----P--------------------TALV--- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~~~----~--------------------~~~v--- 58 (176)
++|++|||||+||||++|+++|+ ++|+ +|++++|++..... . .+.+
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~-----~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 91 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEIL-----EQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCC 91 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHH-----HHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEEC
T ss_pred cCCeEEEECCCcHHHHHHHHHHH-----cCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEEC
Confidence 45799999999999999999999 7899 99999998643210 0 0001
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCC
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 132 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~ 132 (176)
..+++..+++|+.++.++++++.+. ++++|+++||..+|+. ..
T Consensus 92 ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~iv~~SS~~~~~~--------------------------~~ 140 (242)
T 2bka_A 92 LGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-----GCKHFNLLSSKGADKS--------------------------SN 140 (242)
T ss_dssp CCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEECCTTCCTT--------------------------CS
T ss_pred CCcccccCCcccceeeeHHHHHHHHHHHHHC-----CCCEEEEEccCcCCCC--------------------------Cc
Confidence 1123457889999999999999887 5789999999766531 01
Q ss_pred cchHHHHHHHHh---hCCCc-eEEEeccCceEeCCC
Q 030483 133 NFYYELEDVSAS---YSPAI-TYSVHRSSVIIGASP 164 (176)
Q Consensus 133 ~~y~~~e~~~~~---~~~g~-~~~ivRp~~v~G~~~ 164 (176)
..|. ..|...+ +..++ +++++||+++|||..
T Consensus 141 ~~Y~-~sK~~~e~~~~~~~~~~~~~vrpg~v~~~~~ 175 (242)
T 2bka_A 141 FLYL-QVKGEVEAKVEELKFDRYSVFRPGVLLCDRQ 175 (242)
T ss_dssp SHHH-HHHHHHHHHHHTTCCSEEEEEECCEEECTTG
T ss_pred chHH-HHHHHHHHHHHhcCCCCeEEEcCceecCCCC
Confidence 2333 3333222 45678 699999999999964
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=5.4e-17 Score=132.44 Aligned_cols=123 Identities=18% Similarity=0.115 Sum_probs=86.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCC-Cc-EEEEEecCCCC-----------C------C--C---------CCCcc
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGS-PW-KVYGAARRPPP-----------G------W--F---------PTALV 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~-~V~~l~R~~~~-----------~------~--~---------~~~~v 58 (176)
+|+|||||||||||++|+++|+ +. |+ +|++++|+... . . . ..+.|
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~-----~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~V 95 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVL-----DTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDIC 95 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-----HHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----hhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEE
Confidence 5899999999999999999999 67 87 99999997421 0 0 0 00111
Q ss_pred ------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCC
Q 030483 59 ------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 126 (176)
Q Consensus 59 ------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~ 126 (176)
..++.+.+++|+.++.|+++++.+. ++++||++||.++|. |
T Consensus 96 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-----~v~~~V~~SS~~~~~-----------------p----- 148 (344)
T 2gn4_A 96 IHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-----AISQVIALSTDKAAN-----------------P----- 148 (344)
T ss_dssp EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEECCGGGSS-----------------C-----
T ss_pred EECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEecCCccCC-----------------C-----
Confidence 1245678899999999999999987 588999999854321 1
Q ss_pred CCCCCCcchHHHHHHHHh--h---CCCceEEEeccCceEeCCC
Q 030483 127 SRLPFPNFYYELEDVSAS--Y---SPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 127 ~~~~~~~~y~~~e~~~~~--~---~~g~~~~ivRp~~v~G~~~ 164 (176)
..++...+...|+++.. + ..+++++++||++|||++.
T Consensus 149 -~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~ 190 (344)
T 2gn4_A 149 -INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG 190 (344)
T ss_dssp -CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT
T ss_pred -ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC
Confidence 00011112233444443 1 2579999999999999873
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.7e-16 Score=119.17 Aligned_cols=124 Identities=17% Similarity=0.154 Sum_probs=83.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC----CCCC--------------------cc-----c
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTA--------------------LV-----Q 59 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~--------------------~v-----~ 59 (176)
+|+|||||||||||++|+++|+ +.|++|++++|++.... .... .+ .
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAV-----QAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT 77 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-----HCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence 4789999999999999999999 68999999999754321 0100 00 0
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHH
Q 030483 60 ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELE 139 (176)
Q Consensus 60 ~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e 139 (176)
.......++|+.++.++++++.+. ++++|+++||..+|+... ..|. +...|...
T Consensus 78 ~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~v~~Ss~~~~~~~~------------~~~~---------~~~~y~~~ 131 (206)
T 1hdo_A 78 RNDLSPTTVMSEGARNIVAAMKAH-----GVDKVVACTSAFLLWDPT------------KVPP---------RLQAVTDD 131 (206)
T ss_dssp TTCCSCCCHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCTT------------CSCG---------GGHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHHHHHh-----CCCeEEEEeeeeeccCcc------------cccc---------cchhHHHH
Confidence 000112347899999999999987 578999999988775210 1110 22234333
Q ss_pred HHHHh---hCCCceEEEeccCceEeCCC
Q 030483 140 DVSAS---YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 140 ~~~~~---~~~g~~~~ivRp~~v~G~~~ 164 (176)
|...+ +..+++++++||+++ |+..
T Consensus 132 K~~~e~~~~~~~i~~~~lrp~~~-~~~~ 158 (206)
T 1hdo_A 132 HIRMHKVLRESGLKYVAVMPPHI-GDQP 158 (206)
T ss_dssp HHHHHHHHHHTCSEEEEECCSEE-ECCC
T ss_pred HHHHHHHHHhCCCCEEEEeCCcc-cCCC
Confidence 33322 457899999999997 5443
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.67 E-value=5e-18 Score=139.14 Aligned_cols=122 Identities=16% Similarity=0.187 Sum_probs=88.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecC-CCCCCC----CCCcc--------cCcHHHHHHHHHHHHHH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARR-PPPGWF----PTALV--------QESEEVNIFKNSTMLKN 75 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~-~~~~~~----~~~~v--------~~~~~~~~~~N~~~t~~ 75 (176)
|+|||||||||||++|+++|+ +.|+ +|+.++|+ ...... +.+.| ..++.+.+++|+.++.+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~-----~~g~~~v~~~d~~~d~~~l~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ 75 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLT-----STTDHHIFEVHRQTKEEELESALLKADFIVHLAGVNRPEHDKEFSLGNVSYLDH 75 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HHCCCEEEECCTTCCHHHHHHHHHHCSEEEECCCSBCTTCSTTCSSSCCBHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-----hCCCCEEEEECCCCCHHHHHHHhccCCEEEECCcCCCCCCHHHHHHHHHHHHHH
Confidence 489999999999999999999 6898 99999994 322110 11111 23445677899999999
Q ss_pred HHHHHHhcCCCCCCcc-EEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh--hCCCceEE
Q 030483 76 VLSVLVSSNSGRSRLR-HVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS--YSPAITYS 152 (176)
Q Consensus 76 ll~a~~~~~~~~~~v~-~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~--~~~g~~~~ 152 (176)
++++|++. +++ +|+++||..+|+ ..++...+...|+++.+ ++.+++++
T Consensus 76 l~~a~~~~-----~~~~~~v~~Ss~~~~~------------------------~~~Y~~sK~~~E~~~~~~~~~~g~~~~ 126 (369)
T 3st7_A 76 VLDILTRN-----TKKPAILLSSSIQATQ------------------------DNPYGESKLQGEQLLREYAEEYGNTVY 126 (369)
T ss_dssp HHHHHTTC-----SSCCEEEEEEEGGGGS------------------------CSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHh-----CCCCeEEEeCchhhcC------------------------CCCchHHHHHHHHHHHHHHHHhCCCEE
Confidence 99999887 455 899999977652 00111223344555554 34689999
Q ss_pred EeccCceEeCCCC
Q 030483 153 VHRSSVIIGASPR 165 (176)
Q Consensus 153 ivRp~~v~G~~~~ 165 (176)
++||+++|||+..
T Consensus 127 i~R~~~v~G~~~~ 139 (369)
T 3st7_A 127 IYRWPNLFGKWCK 139 (369)
T ss_dssp EEEECEEECTTCC
T ss_pred EEECCceeCCCCC
Confidence 9999999999764
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.4e-15 Score=117.55 Aligned_cols=136 Identities=13% Similarity=0.122 Sum_probs=81.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCCCCCCC----CCCcc---cCcHH---HHHH-------
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGWF----PTALV---QESEE---VNIF------- 67 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~~~----~~~~v---~~~~~---~~~~------- 67 (176)
||++|+||||||+|+||++|+++|+ +.| ++|++++|++..... ....+ ..+++ +.++
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~-----~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~ 94 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLA-----DKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYA 94 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHT-----TCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHH-----hCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEE
Confidence 4567899999999999999999999 688 999999998643211 10111 00110 0000
Q ss_pred -----HHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHH
Q 030483 68 -----KNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVS 142 (176)
Q Consensus 68 -----~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~ 142 (176)
.....+.++++++++. ++++||++||..+|+... + ...+..|..+.. ....|...|+.+
T Consensus 95 ~a~~~~~~~~~~~~~~~~~~~-----~~~~iV~iSS~~~~~~~~------~----~~~~~~~~~~~~-~~~~~~~~~~~l 158 (236)
T 3qvo_A 95 NLTGEDLDIQANSVIAAMKAC-----DVKRLIFVLSLGIYDEVP------G----KFVEWNNAVIGE-PLKPFRRAADAI 158 (236)
T ss_dssp ECCSTTHHHHHHHHHHHHHHT-----TCCEEEEECCCCC--------------------------CG-GGHHHHHHHHHH
T ss_pred cCCCCchhHHHHHHHHHHHHc-----CCCEEEEEecceecCCCC------c----ccccchhhcccc-hHHHHHHHHHHH
Confidence 0113467899999887 578999999999887321 0 012333333221 113344555555
Q ss_pred HhhCCCceEEEeccCceEeCCC
Q 030483 143 ASYSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 143 ~~~~~g~~~~ivRp~~v~G~~~ 164 (176)
. ..+++++++||+.++++..
T Consensus 159 ~--~~gi~~~~vrPg~i~~~~~ 178 (236)
T 3qvo_A 159 E--ASGLEYTILRPAWLTDEDI 178 (236)
T ss_dssp H--TSCSEEEEEEECEEECCSC
T ss_pred H--HCCCCEEEEeCCcccCCCC
Confidence 4 5789999999999999754
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-16 Score=122.39 Aligned_cols=128 Identities=13% Similarity=0.083 Sum_probs=85.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCC--CcEEEEEecCCCC------C--C------C---------CCCcc---
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPP------G--W------F---------PTALV--- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~------~--~------~---------~~~~v--- 58 (176)
+++|+||||||+||||++|+++|+ +. |++|++++|++.. . . . ..+.|
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~-----~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 76 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLK-----EGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVIL 76 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHH-----HTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHH-----hcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEe
Confidence 346789999999999999999999 56 8999999997421 0 0 0 00111
Q ss_pred ---cC------------cH-------HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCC
Q 030483 59 ---QE------------SE-------EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 116 (176)
Q Consensus 59 ---~~------------~~-------~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~ 116 (176)
.. ++ .+.+++|+.++.++++++++. ++++|+++||..+|.
T Consensus 77 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~------------- 138 (253)
T 1xq6_A 77 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-----GVKHIVVVGSMGGTN------------- 138 (253)
T ss_dssp CCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-----TCSEEEEEEETTTTC-------------
T ss_pred ccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-----CCCEEEEEcCccCCC-------------
Confidence 10 01 135789999999999999987 578999999875432
Q ss_pred CCCccccCCCCCCCCCcchHHHHHHHHh---hCCCceEEEeccCceEeCCC
Q 030483 117 PYEVPFKEDSSRLPFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 117 ~~~~p~~E~~~~~~~~~~y~~~e~~~~~---~~~g~~~~ivRp~~v~G~~~ 164 (176)
|..+..++....|...|...| +..+++++++||+.+||+..
T Consensus 139 -------~~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~ 182 (253)
T 1xq6_A 139 -------PDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEG 182 (253)
T ss_dssp -------TTCGGGGGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCS
T ss_pred -------CCCccccccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCc
Confidence 111111111111332333322 35789999999999999874
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-15 Score=123.20 Aligned_cols=128 Identities=16% Similarity=0.105 Sum_probs=82.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-----------CCCCcc---cCcH---HHHHH-
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FPTALV---QESE---EVNIF- 67 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~~~~v---~~~~---~~~~~- 67 (176)
+|++++|||||||||||++|+++|+ +.|++|++++|++.... .....+ ..+. .+.++
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~-----~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~ 81 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASL-----DAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKE 81 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHH-----HTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHH-----HCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhh
Confidence 3556799999999999999999999 68999999999862210 011111 1111 11222
Q ss_pred ------------HHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcch
Q 030483 68 ------------KNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFY 135 (176)
Q Consensus 68 ------------~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y 135 (176)
.|+.++.+++++|++. + .+++|++ | .|| .+++|+++.. +...|
T Consensus 82 ~~~d~Vi~~a~~~n~~~~~~l~~aa~~~---g-~v~~~v~-S---~~g----------------~~~~e~~~~~-p~~~y 136 (346)
T 3i6i_A 82 HEIDIVVSTVGGESILDQIALVKAMKAV---G-TIKRFLP-S---EFG----------------HDVNRADPVE-PGLNM 136 (346)
T ss_dssp TTCCEEEECCCGGGGGGHHHHHHHHHHH---C-CCSEEEC-S---CCS----------------SCTTTCCCCT-THHHH
T ss_pred CCCCEEEECCchhhHHHHHHHHHHHHHc---C-CceEEee-c---ccC----------------CCCCccCcCC-CcchH
Confidence 4888999999999998 2 2888875 3 354 2345555533 12344
Q ss_pred HHHHHHHHh---hCCCceEEEeccCceEeCCC
Q 030483 136 YELEDVSAS---YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 136 ~~~e~~~~~---~~~g~~~~ivRp~~v~G~~~ 164 (176)
+. .|...+ +..+++++++||++++|...
T Consensus 137 ~~-sK~~~e~~l~~~g~~~tivrpg~~~g~~~ 167 (346)
T 3i6i_A 137 YR-EKRRVRQLVEESGIPFTYICCNSIASWPY 167 (346)
T ss_dssp HH-HHHHHHHHHHHTTCCBEEEECCEESSCCC
T ss_pred HH-HHHHHHHHHHHcCCCEEEEEecccccccC
Confidence 43 333322 35789999999999999754
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.59 E-value=2.9e-15 Score=118.13 Aligned_cols=117 Identities=14% Similarity=0.055 Sum_probs=80.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCC--CcEEEEEecCCCCCC----CCC--------------------Ccc----c
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPPGW----FPT--------------------ALV----Q 59 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~~~----~~~--------------------~~v----~ 59 (176)
|+|||||||||||++|+++|+ +. ||+|++++|++.... ... +.| .
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~-----~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLL-----KKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHT-----TTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHH-----HhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 479999999999999999999 56 999999999764320 000 001 1
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHH
Q 030483 60 ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELE 139 (176)
Q Consensus 60 ~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e 139 (176)
.... -++|+.++.+++++|++. ++++|+++||..+|. .+. ++...+...|
T Consensus 76 ~~~~--~~~n~~~~~~l~~a~~~~-----~~~~~v~~Ss~~~~~----------------------~~~-~y~~~K~~~E 125 (287)
T 2jl1_A 76 PHYD--NTLLIVQHANVVKAARDA-----GVKHIAYTGYAFAEE----------------------SII-PLAHVHLATE 125 (287)
T ss_dssp CCSC--HHHHHHHHHHHHHHHHHT-----TCSEEEEEEETTGGG----------------------CCS-THHHHHHHHH
T ss_pred CCcC--chHHHHHHHHHHHHHHHc-----CCCEEEEECCCCCCC----------------------CCC-chHHHHHHHH
Confidence 0111 156999999999999987 678999999865431 010 1111222334
Q ss_pred HHHHhhCCCceEEEeccCceEeCC
Q 030483 140 DVSASYSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 140 ~~~~~~~~g~~~~ivRp~~v~G~~ 163 (176)
++++ ..+++++++||+.++|+.
T Consensus 126 ~~~~--~~~~~~~ilrp~~~~~~~ 147 (287)
T 2jl1_A 126 YAIR--TTNIPYTFLRNALYTDFF 147 (287)
T ss_dssp HHHH--HTTCCEEEEEECCBHHHH
T ss_pred HHHH--HcCCCeEEEECCEecccc
Confidence 4443 478999999999988864
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.59 E-value=2.1e-15 Score=119.95 Aligned_cols=122 Identities=15% Similarity=0.066 Sum_probs=83.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCCCCCC------CCCC--------------------cc--c
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW------FPTA--------------------LV--Q 59 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~~------~~~~--------------------~v--~ 59 (176)
+|+|||||||||||++|+++|+ ++| ++|++++|++.... .... .| .
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~-----~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLL-----EDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHH-----hcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence 5789999999999999999999 577 99999999864310 0000 01 1
Q ss_pred CcH-H-HHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHH
Q 030483 60 ESE-E-VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE 137 (176)
Q Consensus 60 ~~~-~-~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~ 137 (176)
... . .....|+.++.++++++++. ++++|++.|+..+|+. +++. .+..|+.
T Consensus 80 a~~~~~~~~~~~~~~~~~~~~aa~~~-----gv~~iv~~S~~~~~~~------------------~~~~----~~~~y~~ 132 (299)
T 2wm3_A 80 TNYWESCSQEQEVKQGKLLADLARRL-----GLHYVVYSGLENIKKL------------------TAGR----LAAAHFD 132 (299)
T ss_dssp CCHHHHTCHHHHHHHHHHHHHHHHHH-----TCSEEEECCCCCHHHH------------------TTTS----CCCHHHH
T ss_pred CCCCccccchHHHHHHHHHHHHHHHc-----CCCEEEEEcCcccccc------------------CCCc----ccCchhh
Confidence 111 1 12456788999999999987 6889999777665541 1111 1234543
Q ss_pred ----HHHHHHhhCCCceEEEeccCceEeCCC
Q 030483 138 ----LEDVSASYSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 138 ----~e~~~~~~~~g~~~~ivRp~~v~G~~~ 164 (176)
.|++++ ..+++++++||+++||+..
T Consensus 133 sK~~~e~~~~--~~gi~~~ilrp~~~~~~~~ 161 (299)
T 2wm3_A 133 GKGEVEEYFR--DIGVPMTSVRLPCYFENLL 161 (299)
T ss_dssp HHHHHHHHHH--HHTCCEEEEECCEEGGGGG
T ss_pred HHHHHHHHHH--HCCCCEEEEeecHHhhhch
Confidence 233333 4689999999999999753
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2.9e-15 Score=114.33 Aligned_cols=133 Identities=12% Similarity=0.096 Sum_probs=83.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC-CCC------CCCCcc---cCcHHH---HHH------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PGW------FPTALV---QESEEV---NIF------ 67 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~-~~~------~~~~~v---~~~~~~---~~~------ 67 (176)
+|+|+||||||+|+||++++++|++ +.|++|++++|++. ... .....+ ..+++. .++
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv 78 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLT----YTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVF 78 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHH----HCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHh----cCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEE
Confidence 4557799999999999999999992 38999999999865 211 011111 011111 100
Q ss_pred -----HHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHH
Q 030483 68 -----KNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVS 142 (176)
Q Consensus 68 -----~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~ 142 (176)
.|+. ++++++++++. ++++||++||..+|+.. ..+..+.... .....|...+..+
T Consensus 79 ~~ag~~n~~-~~~~~~~~~~~-----~~~~iv~iSs~~~~~~~-------------~~~~~~~~~~-~~~~~y~~~K~~~ 138 (221)
T 3r6d_A 79 VGAMESGSD-MASIVKALSRX-----NIRRVIGVSMAGLSGEF-------------PVALEKWTFD-NLPISYVQGERQA 138 (221)
T ss_dssp ESCCCCHHH-HHHHHHHHHHT-----TCCEEEEEEETTTTSCS-------------CHHHHHHHHH-TSCHHHHHHHHHH
T ss_pred EcCCCCChh-HHHHHHHHHhc-----CCCeEEEEeeceecCCC-------------Cccccccccc-ccccHHHHHHHHH
Confidence 1555 88999999887 57899999998877521 1111111110 0111344333222
Q ss_pred Hh--hCCCceEEEeccCceEeCC
Q 030483 143 AS--YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 143 ~~--~~~g~~~~ivRp~~v~G~~ 163 (176)
.+ +..+++++++||++++++.
T Consensus 139 e~~~~~~~i~~~~vrpg~v~~~~ 161 (221)
T 3r6d_A 139 RNVLRESNLNYTILRLTWLYNDP 161 (221)
T ss_dssp HHHHHHSCSEEEEEEECEEECCT
T ss_pred HHHHHhCCCCEEEEechhhcCCC
Confidence 22 4579999999999999983
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.56 E-value=9.6e-15 Score=115.49 Aligned_cols=119 Identities=13% Similarity=0.117 Sum_probs=77.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCC-CcEEEEEecCCCCCC----CCCC--------------------cc--cCcH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPPGW----FPTA--------------------LV--QESE 62 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~~~----~~~~--------------------~v--~~~~ 62 (176)
|+|||||||||||++|+++|+ +. |++|++++|++.... .... .| ....
T Consensus 1 M~ilVtGatG~iG~~l~~~L~-----~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAI-----ANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHH-----HTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHh-----hCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 479999999999999999998 45 999999999864321 0000 00 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHH
Q 030483 63 EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVS 142 (176)
Q Consensus 63 ~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~ 142 (176)
......|+.++.++++++++. ++++|+++|| |+.. ++.+.. ....+...|+.+
T Consensus 76 ~~~~~~~~~~~~~l~~aa~~~-----gv~~iv~~Ss---~~~~------------------~~~~~~-~~~~~~~~e~~~ 128 (289)
T 3e48_A 76 IHPSFKRIPEVENLVYAAKQS-----GVAHIIFIGY---YADQ------------------HNNPFH-MSPYFGYASRLL 128 (289)
T ss_dssp CCSHHHHHHHHHHHHHHHHHT-----TCCEEEEEEE---SCCS------------------TTCCST-THHHHHHHHHHH
T ss_pred CccchhhHHHHHHHHHHHHHc-----CCCEEEEEcc---cCCC------------------CCCCCc-cchhHHHHHHHH
Confidence 011235789999999999987 6889999987 3211 111111 111112233333
Q ss_pred HhhCCCceEEEeccCceEeC
Q 030483 143 ASYSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 143 ~~~~~g~~~~ivRp~~v~G~ 162 (176)
. ..+++++++||++++|+
T Consensus 129 ~--~~g~~~~ilrp~~~~~~ 146 (289)
T 3e48_A 129 S--TSGIDYTYVRMAMYMDP 146 (289)
T ss_dssp H--HHCCEEEEEEECEESTT
T ss_pred H--HcCCCEEEEeccccccc
Confidence 3 46899999999999986
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.54 E-value=4.1e-15 Score=115.13 Aligned_cols=89 Identities=18% Similarity=0.078 Sum_probs=67.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---C------------------CCCcc---------c
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---F------------------PTALV---------Q 59 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---~------------------~~~~v---------~ 59 (176)
|++|||||+||||++++++|+ ++|++|++++|++.... . ..+.+ .
T Consensus 2 k~vlVtGasg~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~ 76 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLA-----RAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGVTA 76 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCTTS
T ss_pred cEEEEeCCCcHHHHHHHHHHH-----hCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCCCCCcc
Confidence 589999999999999999999 68999999999764310 0 11111 2
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecc
Q 030483 60 ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMG 104 (176)
Q Consensus 60 ~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~ 104 (176)
.++...+++|+.++.++++++...+. ..+.++|+++||..+|+.
T Consensus 77 ~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~ 120 (255)
T 2dkn_A 77 ANSGLVVAVNYFGVSALLDGLAEALS-RGQQPAAVIVGSIAATQP 120 (255)
T ss_dssp SCHHHHHHHHTHHHHHHHHHHHHHHH-TSSSCEEEEECCGGGGST
T ss_pred hhHHHHHHHHhHHHHHHHHHHHHHhh-hcCCceEEEEeccccccc
Confidence 34577899999999999998876421 113578999999888863
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=5.2e-14 Score=110.73 Aligned_cols=117 Identities=18% Similarity=0.202 Sum_probs=74.7
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCC--CcEEEEEecCCCCCC----CCCCcc---cCcH-----------------HH
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPPGW----FPTALV---QESE-----------------EV 64 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~~~----~~~~~v---~~~~-----------------~~ 64 (176)
+|||||||||||++|+++|+ ++ |++|++++|++.... .....+ ..++ ..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~-----~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 75 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLM-----KTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSS 75 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHT-----TTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred CEEEEcCCchHHHHHHHHHH-----hhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 58999999999999999999 56 999999999865321 000000 0000 00
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh
Q 030483 65 NIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS 144 (176)
Q Consensus 65 ~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~ 144 (176)
....|+.++.+++++|.+. ++++|+++||..+|. .+ .++...+...|+++.
T Consensus 76 ~~~~~~~~~~~l~~a~~~~-----~~~~~v~~Ss~~~~~----------------------~~-~~y~~sK~~~e~~~~- 126 (286)
T 2zcu_A 76 EVGQRAPQHRNVINAAKAA-----GVKFIAYTSLLHADT----------------------SP-LGLADEHIETEKMLA- 126 (286)
T ss_dssp ------CHHHHHHHHHHHH-----TCCEEEEEEETTTTT----------------------CC-STTHHHHHHHHHHHH-
T ss_pred CchHHHHHHHHHHHHHHHc-----CCCEEEEECCCCCCC----------------------Cc-chhHHHHHHHHHHHH-
Confidence 1235788999999999987 578999999865431 01 011122333455544
Q ss_pred hCCCceEEEeccCceEeC
Q 030483 145 YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 145 ~~~g~~~~ivRp~~v~G~ 162 (176)
..+++++++||+.++|+
T Consensus 127 -~~~~~~~ilrp~~~~~~ 143 (286)
T 2zcu_A 127 -DSGIVYTLLRNGWYSEN 143 (286)
T ss_dssp -HHCSEEEEEEECCBHHH
T ss_pred -HcCCCeEEEeChHHhhh
Confidence 36899999999876654
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.44 E-value=4.2e-13 Score=105.38 Aligned_cols=128 Identities=16% Similarity=0.164 Sum_probs=83.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCC----------------------------CCcc-
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP----------------------------TALV- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~----------------------------~~~v- 58 (176)
++|++|||||+|+||++++++|+ ++|++|++++|+....... .+.+
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 101 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYR-----DRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLV 101 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 46899999999999999999999 7999999999986542110 0000
Q ss_pred ---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcccc
Q 030483 59 ---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 59 ---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~ 123 (176)
.++++..+++|+.++.++++++...+. ..+..+|+++||...+.. .
T Consensus 102 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~iv~isS~~~~~~---------------~--- 162 (260)
T 3un1_A 102 NNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEML-KQGSGHIVSITTSLVDQP---------------M--- 162 (260)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTTCEEEEEECCTTTTSC---------------B---
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCcEEEEEechhhccC---------------C---
Confidence 112456788999999999888743210 113578999988654320 0
Q ss_pred CCCCCCCCCcchHHHH-----HHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 124 EDSSRLPFPNFYYELE-----DVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 124 E~~~~~~~~~~y~~~e-----~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+. .+...|... .+.+ + ...|+++.+++|++|++|..
T Consensus 163 ---~~--~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~ 208 (260)
T 3un1_A 163 ---VG--MPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMH 208 (260)
T ss_dssp ---TT--CCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTS
T ss_pred ---CC--CccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCC
Confidence 00 112223322 2222 2 35689999999999998853
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=3.2e-13 Score=110.43 Aligned_cols=121 Identities=13% Similarity=0.079 Sum_probs=77.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CCC-----CC-c---------------c--
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WFP-----TA-L---------------V-- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~-----~~-~---------------v-- 58 (176)
+|+|||||||||||++|+++|+ ++|++|++++|++... ... .+ . |
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~ 79 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAA-----AVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFI 79 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHH-----HTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----hCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence 5789999999999999999999 6899999999976431 000 01 0 0
Q ss_pred -cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCC-ccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchH
Q 030483 59 -QESEEVNIFKNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYY 136 (176)
Q Consensus 59 -~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~-v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~ 136 (176)
.... ....|..+ +++++++++. + +++||++||..+- .+.+ .+..++...+.
T Consensus 80 ~a~~~--~~~~~~~~-~~l~~aa~~~-----g~v~~~V~~SS~~~~------------------~~~~-~~~~~y~~sK~ 132 (352)
T 1xgk_A 80 NTTSQ--AGDEIAIG-KDLADAAKRA-----GTIQHYIYSSMPDHS------------------LYGP-WPAVPMWAPKF 132 (352)
T ss_dssp CCCST--TSCHHHHH-HHHHHHHHHH-----SCCSEEEEEECCCGG------------------GTSS-CCCCTTTHHHH
T ss_pred cCCCC--CcHHHHHH-HHHHHHHHHc-----CCccEEEEeCCcccc------------------ccCC-CCCccHHHHHH
Confidence 0000 01346666 9999999987 5 7899999985310 0111 11011112223
Q ss_pred HHHHHHHhhCCCceEEEeccCceEeCCC
Q 030483 137 ELEDVSASYSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 137 ~~e~~~~~~~~g~~~~ivRp~~v~G~~~ 164 (176)
..|+++. ..+++++++||+ +||++.
T Consensus 133 ~~E~~~~--~~gi~~~ivrpg-~~g~~~ 157 (352)
T 1xgk_A 133 TVENYVR--QLGLPSTFVYAG-IYNNNF 157 (352)
T ss_dssp HHHHHHH--TSSSCEEEEEEC-EEGGGC
T ss_pred HHHHHHH--HcCCCEEEEecc-eecCCc
Confidence 3344443 468999999987 789876
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=3.4e-13 Score=107.46 Aligned_cols=124 Identities=14% Similarity=0.172 Sum_probs=77.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------CCCCCcc---cCcHHH---H-----
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------WFPTALV---QESEEV---N----- 65 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~~~~~~v---~~~~~~---~----- 65 (176)
+++|||||||||||++|+++|+ +.|++|++++|+.... ......+ ..+++. .
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d 78 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASI-----SLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVD 78 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-----HTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-----hCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCC
Confidence 4689999999999999999999 6899999999985321 0011111 001110 0
Q ss_pred ----------HHHHHHHHHHHHHHHHhcCCCCCC-ccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcc
Q 030483 66 ----------IFKNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNF 134 (176)
Q Consensus 66 ----------~~~N~~~t~~ll~a~~~~~~~~~~-v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~ 134 (176)
...|+.++.+++++|++. + +++|++ | +||... ..+ +.+..|. ..
T Consensus 79 ~vi~~a~~~~~~~~~~~~~~l~~aa~~~-----g~v~~~v~-S---~~g~~~------------~~~---~~~~~p~-~~ 133 (313)
T 1qyd_A 79 VVISALAGGVLSHHILEQLKLVEAIKEA-----GNIKRFLP-S---EFGMDP------------DIM---EHALQPG-SI 133 (313)
T ss_dssp EEEECCCCSSSSTTTTTHHHHHHHHHHS-----CCCSEEEC-S---CCSSCT------------TSC---CCCCSST-TH
T ss_pred EEEECCccccchhhHHHHHHHHHHHHhc-----CCCceEEe-c---CCcCCc------------ccc---ccCCCCC-cc
Confidence 012677889999999987 5 889874 3 455211 111 1222211 33
Q ss_pred hHHHHHHHHh---hCCCceEEEeccCceEeCC
Q 030483 135 YYELEDVSAS---YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 135 y~~~e~~~~~---~~~g~~~~ivRp~~v~G~~ 163 (176)
+| ..|...| +..+++++++||+.++|+.
T Consensus 134 ~y-~sK~~~e~~~~~~g~~~~ilrp~~~~~~~ 164 (313)
T 1qyd_A 134 TF-IDKRKVRRAIEAASIPYTYVSSNMFAGYF 164 (313)
T ss_dssp HH-HHHHHHHHHHHHTTCCBCEEECCEEHHHH
T ss_pred hH-HHHHHHHHHHHhcCCCeEEEEeceecccc
Confidence 44 3333322 4568999999999998854
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.42 E-value=6e-13 Score=102.29 Aligned_cols=127 Identities=16% Similarity=-0.011 Sum_probs=83.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------C---------------CCCcc-----
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------F---------------PTALV----- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~---------------~~~~v----- 58 (176)
|+|++|||||+|+||++++++|+ ++|++|++++|+..... . ..+.+
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag 75 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALK-----ARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG 75 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEccCccccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence 35789999999999999999999 78999999999764110 0 00000
Q ss_pred -----------cC----cHHHHHHHHHHHHHHHHHHHHhcCCCCC-----CccEEEEeccceeecccccCCCccCCCCCC
Q 030483 59 -----------QE----SEEVNIFKNSTMLKNVLSVLVSSNSGRS-----RLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 59 -----------~~----~~~~~~~~N~~~t~~ll~a~~~~~~~~~-----~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
.+ ++.+.+++|+.++.++++++...+.... ...+|+++||...|...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------- 142 (242)
T 1uay_A 76 VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ------------- 142 (242)
T ss_dssp CCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC-------------
T ss_pred ccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-------------
Confidence 01 4456789999999999998876521010 12389999987665310
Q ss_pred CccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 119 EVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ ....|... +.+.+ + ...+++++++||+.|+++.
T Consensus 143 --------~---~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 185 (242)
T 1uay_A 143 --------I---GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPL 185 (242)
T ss_dssp --------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHH
T ss_pred --------C---CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchh
Confidence 0 11223222 22221 1 3458999999999999874
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.42 E-value=6.1e-13 Score=105.05 Aligned_cols=123 Identities=15% Similarity=0.038 Sum_probs=80.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C-CC--------------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W-FP-------------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~-------------------------- 54 (176)
++|++|||||+|+||++++++|+ +.|++|++++|+.... . ..
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 78 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAV-----AAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYG 78 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999 7999999999975321 0 00
Q ss_pred -CCcc----------------cCcHHHHHHHHHHH----HHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 -TALV----------------QESEEVNIFKNSTM----LKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 -~~~v----------------~~~~~~~~~~N~~~----t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .+++...+++|+.+ ++++++.+++. +..+||++||...+.
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~---------- 143 (281)
T 3m1a_A 79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-----GSGSVVNISSFGGQL---------- 143 (281)
T ss_dssp CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTC----------
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEEcCccccC----------
Confidence 0001 11235578999999 55555555555 457899999865432
Q ss_pred CCCCCCccccCCCCCCCCCcchHHH----HHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYEL----EDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ . +....|... +.+.+. ...++++.++||++|.++..
T Consensus 144 -------~------~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 189 (281)
T 3m1a_A 144 -------S------F-AGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLF 189 (281)
T ss_dssp -------C------C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred -------C------C-CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccc
Confidence 0 0 011233322 222221 34689999999999988754
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.3e-12 Score=99.39 Aligned_cols=128 Identities=12% Similarity=0.010 Sum_probs=80.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC---------C------------------CCcc-
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF---------P------------------TALV- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~---------~------------------~~~v- 58 (176)
+++|++|||||+|+||++++++|+ ++|++|++++|+...... . .+.+
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv 79 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFV-----EAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALV 79 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 456899999999999999999999 799999999997532100 0 0001
Q ss_pred ---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcccc
Q 030483 59 ---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 59 ---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~ 123 (176)
.+++++.+++|+.++.++++++...+. ..+..+|+++||...+. +
T Consensus 80 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~-~~~~g~iv~isS~~~~~-----------------~-- 139 (250)
T 2fwm_X 80 NAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFR-RQRGGAIVTVASDAAHT-----------------P-- 139 (250)
T ss_dssp ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCCEEEEECCGGGTS-----------------C--
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH-hcCCCEEEEECchhhCC-----------------C--
Confidence 113456789999999888888743210 01346899998865432 0
Q ss_pred CCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 124 EDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 124 E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. +....|... +.+.+ + ...++++.++||+.++++..
T Consensus 140 --~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 184 (250)
T 2fwm_X 140 --R---IGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQ 184 (250)
T ss_dssp --C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----
T ss_pred --C---CCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccc
Confidence 0 111233322 22221 1 34689999999999998753
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=4.3e-13 Score=106.60 Aligned_cols=124 Identities=14% Similarity=0.130 Sum_probs=76.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------------CCCCCcc---cCcHHH---HHH--
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------------WFPTALV---QESEEV---NIF-- 67 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------~~~~~~v---~~~~~~---~~~-- 67 (176)
+++|||||||||||++|+++|+ +.|++|++++|+.... ......+ ..+++. .++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~-----~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASL-----DLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNV 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-----HTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-----hCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCC
Confidence 3679999999999999999999 6899999999985321 0011111 111111 110
Q ss_pred ---------HHHHHHHHHHHHHHhcCCCCCC-ccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHH
Q 030483 68 ---------KNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE 137 (176)
Q Consensus 68 ---------~N~~~t~~ll~a~~~~~~~~~~-v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~ 137 (176)
.++.++.+++++|++. + +++|++ | .||. ..+|+.+..|. ..+|
T Consensus 79 d~vi~~a~~~~~~~~~~l~~aa~~~-----g~v~~~v~-S---~~g~----------------~~~~~~~~~p~-~~~y- 131 (308)
T 1qyc_A 79 DVVISTVGSLQIESQVNIIKAIKEV-----GTVKRFFP-S---EFGN----------------DVDNVHAVEPA-KSVF- 131 (308)
T ss_dssp SEEEECCCGGGSGGGHHHHHHHHHH-----CCCSEEEC-S---CCSS----------------CTTSCCCCTTH-HHHH-
T ss_pred CEEEECCcchhhhhHHHHHHHHHhc-----CCCceEee-c---cccc----------------CccccccCCcc-hhHH-
Confidence 1245678999999987 4 888873 3 3541 11233332211 3344
Q ss_pred HHHHHHh---hCCCceEEEeccCceEeCCC
Q 030483 138 LEDVSAS---YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 138 ~e~~~~~---~~~g~~~~ivRp~~v~G~~~ 164 (176)
..|...+ +..+++++++||+.++|+..
T Consensus 132 ~sK~~~e~~~~~~~~~~~~~r~~~~~~~~~ 161 (308)
T 1qyc_A 132 EVKAKVRRAIEAEGIPYTYVSSNCFAGYFL 161 (308)
T ss_dssp HHHHHHHHHHHHHTCCBEEEECCEEHHHHT
T ss_pred HHHHHHHHHHHhcCCCeEEEEeceeccccc
Confidence 3333322 34689999999999988643
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.38 E-value=7.6e-13 Score=102.08 Aligned_cols=127 Identities=16% Similarity=0.089 Sum_probs=83.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC---------C--------CC------------CCCc
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP---------G--------WF------------PTAL 57 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~---------~--------~~------------~~~~ 57 (176)
+.+|++|||||+|+||++++++|+ ++|++|++++|+... . .. ..+.
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 79 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALH-----ASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDL 79 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCE
Confidence 557899999999999999999999 799999999986421 0 00 0011
Q ss_pred c----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCC-ccEEEEeccceeecccccCCCccCCCCCCCc
Q 030483 58 V----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 120 (176)
Q Consensus 58 v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~-v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~ 120 (176)
+ .++++..+++|+.++.++++++...+. ..+ ..+|+++||...|...
T Consensus 80 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~iv~~sS~~~~~~~--------------- 143 (244)
T 1cyd_A 80 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMI-NRGVPGSIVNVSSMVAHVTF--------------- 143 (244)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCCEEEEEECCGGGTSCC---------------
T ss_pred EEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-hCCCCeEEEEEcchhhcCCC---------------
Confidence 1 112345789999999888888765410 002 4689999987655310
Q ss_pred cccCCCCCCCCCcchHH----HHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 121 PFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 121 p~~E~~~~~~~~~~y~~----~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
+....|.. .+.+.+. ...++++.++||+.++|+.
T Consensus 144 ---------~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~ 186 (244)
T 1cyd_A 144 ---------PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM 186 (244)
T ss_dssp ---------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHH
T ss_pred ---------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence 01122322 2222222 2368999999999999874
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-12 Score=101.62 Aligned_cols=129 Identities=11% Similarity=-0.036 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CC---------C-------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WF---------P------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~---------~------------- 54 (176)
+.+|++|||||+|+||++++++|+ ++|++|++++|+.... .. .
T Consensus 11 l~~k~vlItGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALA-----EAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVH 85 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 346899999999999999999999 7899999999874210 00 0
Q ss_pred -----CCcc-------c----------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 55 -----TALV-------Q----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 55 -----~~~v-------~----------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
.+.+ . +++.+.+++|+.++.++++++...+. ..+..+|+++||...+.
T Consensus 86 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~~~~--------- 155 (260)
T 3awd_A 86 EQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIML-EQKQGVIVAIGSMSGLI--------- 155 (260)
T ss_dssp HHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTS---------
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHh-hcCCCEEEEEecchhcc---------
Confidence 0001 1 01245689999999998888765310 01346899988754331
Q ss_pred CCCCCCCccccCCCCCCCCC-cchHHH----HHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFP-NFYYEL----EDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~-~~y~~~----e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
.. +. .+ ..|... +.+.+. ...++++.++||++|+++..
T Consensus 156 ------~~------~~--~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~ 203 (260)
T 3awd_A 156 ------VN------RP--QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLT 203 (260)
T ss_dssp ------CC------SS--SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred ------cC------CC--CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchh
Confidence 00 10 11 233322 222222 24689999999999999864
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.5e-12 Score=101.35 Aligned_cols=127 Identities=13% Similarity=0.039 Sum_probs=83.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC------C--------------------CCcc--
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF------P--------------------TALV-- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~------~--------------------~~~v-- 58 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+...... + .+.+
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvn 100 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALR-----AAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVN 100 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 356899999999999999999999 799999999997543210 0 0001
Q ss_pred --------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 59 --------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 59 --------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
.++++..+++|+.++.++++++...+. ..+..+||++||...+. +.
T Consensus 101 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~iv~isS~~~~~-----------------~~-- 160 (266)
T 3uxy_A 101 NAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMA-AAGGGAIVNVASCWGLR-----------------PG-- 160 (266)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCSBTTB-----------------CC--
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEECCHHhCC-----------------CC--
Confidence 113355788999999999988743210 01346899999865432 10
Q ss_pred CCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 125 DSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 125 ~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+....|... +.+.+ + ...|+++.+++|+.|.++.
T Consensus 161 -----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 203 (266)
T 3uxy_A 161 -----PGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPM 203 (266)
T ss_dssp -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHH
T ss_pred -----CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchH
Confidence 011223322 22221 2 3468999999999998763
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.37 E-value=8.9e-13 Score=104.84 Aligned_cols=135 Identities=14% Similarity=0.074 Sum_probs=88.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CC----------C--------------CC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WF----------P--------------TA 56 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~----------~--------------~~ 56 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.... .. . .+
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELA-----RRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence 357899999999999999999999 7999999999974320 00 0 00
Q ss_pred cc--------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccc
Q 030483 57 LV--------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 57 ~v--------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~ 122 (176)
.+ .++++..+++|+.++.++++++... ..++||++||...|.+... ..+.
T Consensus 89 ~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-----~~~riv~isS~~~~~~~~~-----------~~~~ 152 (291)
T 3rd5_A 89 VLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-----LTDRVVTVSSMAHWPGRIN-----------LEDL 152 (291)
T ss_dssp EEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-----EEEEEEEECCGGGTTCCCC-----------SSCT
T ss_pred EEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHhheeEeechhhccCCCC-----------cccc
Confidence 01 2234578999999999999999887 3568999999877743210 1111
Q ss_pred cCC-CCCCCCCcchHHHHHHH---------Hh-hCCC--ceEEEeccCceEeCCC
Q 030483 123 KED-SSRLPFPNFYYELEDVS---------AS-YSPA--ITYSVHRSSVIIGASP 164 (176)
Q Consensus 123 ~E~-~~~~~~~~~y~~~e~~~---------~~-~~~g--~~~~ivRp~~v~G~~~ 164 (176)
.++ .+. .+...|...|.. .+ ...+ +++..++|+.|..+-.
T Consensus 153 ~~~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~ 205 (291)
T 3rd5_A 153 NWRSRRY--SPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQ 205 (291)
T ss_dssp TCSSSCC--CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-
T ss_pred cccccCC--CCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccc
Confidence 122 221 223334433322 11 2234 9999999999976643
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=3.6e-13 Score=105.04 Aligned_cols=134 Identities=9% Similarity=0.019 Sum_probs=83.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------CCC---------C------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------WFP---------T------------ 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~---------~------------ 55 (176)
++|++|||||+|+||++++++|+ +.|++|++++|+.... ... +
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 87 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVA-----AAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID 87 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHH-----HTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHH
Confidence 46789999999999999999999 7999999999964321 000 0
Q ss_pred ------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 56 ------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 56 ------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
+.+ .+++...+++|+.++.++++++...+.......+|+++||...+...
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------- 159 (265)
T 1h5q_A 88 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN-------- 159 (265)
T ss_dssp HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------
T ss_pred HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccc--------
Confidence 000 01234568999999999998876541000113689999987654311
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHHH-----HHHh-----hCCCceEEEeccCceEeCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e~-----~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+- +..+. .+...|...| +.+. ...++++.++||++|+++..
T Consensus 160 -------~~-~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 210 (265)
T 1h5q_A 160 -------QS-SLNGS--LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT 210 (265)
T ss_dssp -------EE-ETTEE--CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG
T ss_pred -------cc-ccccc--ccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccc
Confidence 00 01111 1222333222 2221 34589999999999998753
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=2.3e-13 Score=110.44 Aligned_cols=135 Identities=10% Similarity=0.052 Sum_probs=85.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-------EEEEEecCCC----C-----------CC-------C------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARRPP----P-----------GW-------F------ 53 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-------~V~~l~R~~~----~-----------~~-------~------ 53 (176)
.+||+||||+||||++|+..|+ .+|+ +|+.+++... . .. .
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~-----~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIA-----AGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHH-----TTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----hCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHh
Confidence 3589999999999999999999 5775 8999987531 0 00 0
Q ss_pred -CCCcc----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCC-CCccEEEEeccceeecccccCCCccCCCCCCCcc
Q 030483 54 -PTALV----------QESEEVNIFKNSTMLKNVLSVLVSSNSGR-SRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 54 -~~~~v----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~-~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p 121 (176)
+.+.| ..++.++++.|+.++.++++++++. + +. .+++++|+...- ..+
T Consensus 79 ~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~---~~~~-~~vvv~snp~~~----------------~~~ 138 (327)
T 1y7t_A 79 KDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV---AKKD-VKVLVVGNPANT----------------NAL 138 (327)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH---SCTT-CEEEECSSSHHH----------------HHH
T ss_pred CCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh---cCCC-eEEEEeCCchhh----------------hHH
Confidence 00111 2345778999999999999999997 4 22 256655543200 012
Q ss_pred ccCCCC-CCCCCcch----HHHHHHHHh--hCCCceEEEeccCceEeCCCCCCC
Q 030483 122 FKEDSS-RLPFPNFY----YELEDVSAS--YSPAITYSVHRSSVIIGASPRSLY 168 (176)
Q Consensus 122 ~~E~~~-~~~~~~~y----~~~e~~~~~--~~~g~~~~ivRp~~v~G~~~~~~~ 168 (176)
+.++.. ..++...| ...|++... +..+++.+++|+++||||+..+.+
T Consensus 139 ~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~~~~ 192 (327)
T 1y7t_A 139 IAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMF 192 (327)
T ss_dssp HHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSSTTCE
T ss_pred HHHHHcCCCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCCeEE
Confidence 222211 11111233 334554433 356899999999999999865433
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.36 E-value=2.1e-12 Score=101.03 Aligned_cols=127 Identities=14% Similarity=0.083 Sum_probs=76.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-------------C--------C--------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-------------G--------W-------------- 52 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-------------~--------~-------------- 52 (176)
.+|++|||||+|+||++++++|+ ++|++|++++|+... . .
T Consensus 13 ~~k~vlITGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFA-----GFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS 87 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 45899999999999999999999 799999999986421 0 0
Q ss_pred ---CCCCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 53 ---FPTALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 53 ---~~~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
...+.+ .+++.+.+++|+.++.++++++...+. ..+.++|+++||...|..
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~--------- 157 (266)
T 1xq1_A 88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLK-ASGCGNIIFMSSIAGVVS--------- 157 (266)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHSSCEEEEEC----------------
T ss_pred HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEccchhccC---------
Confidence 000111 012345688999999999988843210 013578999998765421
Q ss_pred CCCCCCccccCCCCCCCCCcchHHH----HHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYEL----EDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
. + ....|... +.+.+. ...++++.++||++++++..
T Consensus 158 ------~------~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 202 (266)
T 1xq1_A 158 ------A------S---VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLA 202 (266)
T ss_dssp ------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----
T ss_pred ------C------C---CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchh
Confidence 0 0 11223322 222221 34589999999999999864
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.8e-12 Score=100.51 Aligned_cols=127 Identities=9% Similarity=-0.047 Sum_probs=82.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------------CC------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------------WF------------ 53 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------------~~------------ 53 (176)
+.++++|||||+|+||++++++|+ +.|++|++++|+.... ..
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 83 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFA-----TAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAI 83 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHH-----TTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 356899999999999999999999 7899999999874210 00
Q ss_pred ----CCCcc--------c-------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 54 ----PTALV--------Q-------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 54 ----~~~~v--------~-------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
..+.+ . +++.+.+++|+.++.++++++...+. ..+.++|+++||...|..
T Consensus 84 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~---------- 152 (255)
T 1fmc_A 84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEME-KNGGGVILTITSMAAENK---------- 152 (255)
T ss_dssp HHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTCC----------
T ss_pred HhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEcchhhcCC----------
Confidence 00001 0 12345788999999888888763210 013578999988655421
Q ss_pred CCCCCccccCCCCCCCCCcchHH----HHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~----~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
. + ....|.. .+.+.+. ...++++.++||+.++++.
T Consensus 153 -----~------~---~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~ 196 (255)
T 1fmc_A 153 -----N------I---NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA 196 (255)
T ss_dssp -----C------T---TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred -----C------C---CCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchh
Confidence 0 0 1122322 2222221 3568999999999999874
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.8e-12 Score=96.29 Aligned_cols=122 Identities=18% Similarity=0.093 Sum_probs=80.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC----CCCC------------CCcc--------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP----GWFP------------TALV-------------- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----~~~~------------~~~v-------------- 58 (176)
+|++|||||+|+||++++++|+ +|++|++++|+... .... .+.+
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~------~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~ 76 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE------KKAEVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDAIVSATGSATFSPLTE 76 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT------TTSEEEEEESSSSSEECCTTCHHHHHHHHHHHCCEEEEEECCCCCCCCCGGG
T ss_pred CcEEEEEcCCcHHHHHHHHHHH------CCCeEEEEecCccceeeecCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhh
Confidence 3489999999999999999998 58999999998531 1100 0111
Q ss_pred --cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchH
Q 030483 59 --QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYY 136 (176)
Q Consensus 59 --~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~ 136 (176)
.+++.+.+++|+.++.++++++...+ .+-.+|+++||...+. +. +....|.
T Consensus 77 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~iv~~sS~~~~~-----------------~~-------~~~~~Y~ 129 (202)
T 3d7l_A 77 LTPEKNAVTISSKLGGQINLVLLGIDSL---NDKGSFTLTTGIMMED-----------------PI-------VQGASAA 129 (202)
T ss_dssp CCHHHHHHHHHTTTHHHHHHHHTTGGGE---EEEEEEEEECCGGGTS-----------------CC-------TTCHHHH
T ss_pred CCHHHHHHHHhhccHHHHHHHHHHHHHh---ccCCEEEEEcchhhcC-----------------CC-------CccHHHH
Confidence 01224567899999999999987752 1126889988754331 10 0112233
Q ss_pred H----HHHHHHh--h--CCCceEEEeccCceEeCC
Q 030483 137 E----LEDVSAS--Y--SPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 137 ~----~e~~~~~--~--~~g~~~~ivRp~~v~G~~ 163 (176)
. .+.+.+. . ..++++.++||+.++++.
T Consensus 130 ~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~ 164 (202)
T 3d7l_A 130 MANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESW 164 (202)
T ss_dssp HHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGH
T ss_pred HHHHHHHHHHHHHHHHccCCeEEEEEecCccCCch
Confidence 2 2333332 1 248999999999999974
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.35 E-value=6.4e-12 Score=98.73 Aligned_cols=90 Identities=14% Similarity=0.017 Sum_probs=65.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--------C------------------CCcc--
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------P------------------TALV-- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------~------------------~~~v-- 58 (176)
+.+|++|||||+|+||++++++|+ ++|++|++++|+...... . .+.+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFV-----DEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 567899999999999999999999 799999999997543100 0 0111
Q ss_pred --------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 59 --------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 59 --------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
.+++...+++|+.++.++++++...+. ..+..+||++||...+
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~ 137 (264)
T 2dtx_A 81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMI-RSRDPSIVNISSVQAS 137 (264)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHT-TSSSCEEEEECCGGGT
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCcEEEEECCchhc
Confidence 112456789999999888888776421 1135789999986554
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.35 E-value=5.5e-12 Score=98.30 Aligned_cols=124 Identities=11% Similarity=-0.032 Sum_probs=82.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-------CC------------------Ccc----
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-------PT------------------ALV---- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-------~~------------------~~v---- 58 (176)
|+|++|||||+|+||++++++|+ ++|++|++++|+...... .+ +.+
T Consensus 21 m~k~vlITGas~gIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~A 95 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFK-----SKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAA 95 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred cCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 56899999999999999999999 799999999998754211 00 000
Q ss_pred -------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC
Q 030483 59 -------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 59 -------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
.+++.+.+++|+.++.++++++...+ .+-.+|+++||...+. +.
T Consensus 96 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~g~iv~isS~~~~~-----------------~~--- 152 (251)
T 3orf_A 96 GGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLL---NQGGLFVLTGASAALN-----------------RT--- 152 (251)
T ss_dssp CCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHE---EEEEEEEEECCGGGGS-----------------CC---
T ss_pred ccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhh---ccCCEEEEEechhhcc-----------------CC---
Confidence 11234578899999999999988752 1224799998865432 00
Q ss_pred CCCCCCCcchHHH----HHHHHh---h----CCCceEEEeccCceEeCC
Q 030483 126 SSRLPFPNFYYEL----EDVSAS---Y----SPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 126 ~~~~~~~~~y~~~----e~~~~~---~----~~g~~~~ivRp~~v~G~~ 163 (176)
+....|... +.+.+. . ..++++.+++|+.|..+.
T Consensus 153 ----~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~ 197 (251)
T 3orf_A 153 ----SGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT 197 (251)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc
Confidence 011223322 222222 1 468999999999997753
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=8.2e-13 Score=105.77 Aligned_cols=123 Identities=13% Similarity=0.054 Sum_probs=75.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC--------CCCCcc---cCcHHH---HHH------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALV---QESEEV---NIF------ 67 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v---~~~~~~---~~~------ 67 (176)
|+++|||||||||||++|+++|+ +.|++|++++|++.... .....+ ..+++. .++
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~-----~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi 84 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSL-----KLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVI 84 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHH-----HTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CCCeEEEECCCchHHHHHHHHHH-----HCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEE
Confidence 34689999999999999999999 68999999999864210 011111 111111 110
Q ss_pred -----HHHHHHHHHHHHHHhcCCCCCC-ccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHH
Q 030483 68 -----KNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV 141 (176)
Q Consensus 68 -----~N~~~t~~ll~a~~~~~~~~~~-v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~ 141 (176)
.++.++.++++++++. + +++|++ | .||.. .+|+.+..| ...+| ..|.
T Consensus 85 ~~a~~~~~~~~~~l~~aa~~~-----g~v~~~v~-S---~~g~~----------------~~~~~~~~p-~~~~y-~sK~ 137 (318)
T 2r6j_A 85 SALAFPQILDQFKILEAIKVA-----GNIKRFLP-S---DFGVE----------------EDRINALPP-FEALI-ERKR 137 (318)
T ss_dssp ECCCGGGSTTHHHHHHHHHHH-----CCCCEEEC-S---CCSSC----------------TTTCCCCHH-HHHHH-HHHH
T ss_pred ECCchhhhHHHHHHHHHHHhc-----CCCCEEEe-e---ccccC----------------cccccCCCC-cchhH-HHHH
Confidence 1245678999999987 4 788874 3 35411 123332211 12334 3333
Q ss_pred HHh---hCCCceEEEeccCceEeC
Q 030483 142 SAS---YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 142 ~~~---~~~g~~~~ivRp~~v~G~ 162 (176)
..+ +..+++++++||+.+++.
T Consensus 138 ~~e~~~~~~~~~~~~lr~~~~~~~ 161 (318)
T 2r6j_A 138 MIRRAIEEANIPYTYVSANCFASY 161 (318)
T ss_dssp HHHHHHHHTTCCBEEEECCEEHHH
T ss_pred HHHHHHHhcCCCeEEEEcceehhh
Confidence 222 357899999999887764
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=2e-12 Score=102.93 Aligned_cols=128 Identities=14% Similarity=-0.058 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------CC---------C------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------WF---------P------------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~---------~------------ 54 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.... .. .
T Consensus 24 l~~k~vlITGasggiG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 98 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLS-----SLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL 98 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHH
Confidence 356899999999999999999999 7999999999874210 00 0
Q ss_pred ------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 55 ------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 55 ------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
.+.+ .+++...+++|+.++.++++++...+....+..+|+++||...+..
T Consensus 99 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-------- 170 (302)
T 1w6u_A 99 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG-------- 170 (302)
T ss_dssp HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC--------
T ss_pred HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC--------
Confidence 0111 1123557899999999888887653100013468999988654421
Q ss_pred CCCCCCCccccCCCCCCCCCcchHH----HHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~----~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
. + ....|.. .+.+.+. ...++++.++||++++++.
T Consensus 171 -------~------~---~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~ 214 (302)
T 1w6u_A 171 -------S------G---FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG 214 (302)
T ss_dssp -------C------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred -------C------C---CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcc
Confidence 0 0 1122322 2222222 3468999999999999874
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.8e-12 Score=101.86 Aligned_cols=129 Identities=12% Similarity=-0.039 Sum_probs=85.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC------------C------C--C--------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP------------G------W--F-------------- 53 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~------------~------~--~-------------- 53 (176)
.+|++|||||+|+||++++++|+ ++|++|++++|+... . . .
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 89 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFV-----RYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK 89 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999 799999999886421 0 0 0
Q ss_pred --CCCcc------c------------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 54 --PTALV------Q------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 54 --~~~~v------~------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
..+.+ . +++.+.+++|+.++.++++++...+. ..+..+|+++||...|..
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~--------- 159 (278)
T 2bgk_A 90 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMI-PAKKGSIVFTASISSFTA--------- 159 (278)
T ss_dssp HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHG-GGTCEEEEEECCGGGTCC---------
T ss_pred cCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh-hcCCCeEEEEeeccccCC---------
Confidence 00001 0 12345789999999999988876421 113568999998766531
Q ss_pred CCCCCCccccCCCCCCCCCcchHHH----HHHHHh-----hCCCceEEEeccCceEeCCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYEL----EDVSAS-----YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~~-----~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.| . ....|... +.+.+. ...+++++++||++|+|+...
T Consensus 160 ------~~-------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 206 (278)
T 2bgk_A 160 ------GE-------G-VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLT 206 (278)
T ss_dssp ------CT-------T-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCT
T ss_pred ------CC-------C-CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhh
Confidence 01 0 11223322 222222 246899999999999998753
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.4e-12 Score=98.03 Aligned_cols=118 Identities=20% Similarity=0.155 Sum_probs=80.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------------CC------------CCCcc---
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------------WF------------PTALV--- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------------~~------------~~~~v--- 58 (176)
|++|||||+|+||++++++|+ ++ +|++++|++... .. ..+.+
T Consensus 1 k~vlVtGasg~iG~~la~~l~-----~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 73 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALK-----GH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHA 73 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTT-----TS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHH-----hC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence 579999999999999999999 45 999999874210 00 00111
Q ss_pred -------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC
Q 030483 59 -------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 59 -------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
.+++.+.+++|+.++.++++++.+. +..+|+++||...|...
T Consensus 74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~sS~~~~~~~-------------------- 128 (207)
T 2yut_A 74 VGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-----KGARAVFFGAYPRYVQV-------------------- 128 (207)
T ss_dssp CCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-----EEEEEEEECCCHHHHSS--------------------
T ss_pred CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-----CCcEEEEEcChhhccCC--------------------
Confidence 1234567899999999999999554 56899999987665310
Q ss_pred CCCCCCCcchHH----HHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 126 SSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 126 ~~~~~~~~~y~~----~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
+....|.. .+.+.+. ...+++++++||+.++++.
T Consensus 129 ----~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~ 171 (207)
T 2yut_A 129 ----PGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGL 171 (207)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGG
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCC
Confidence 01122322 2222222 3478999999999999874
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=3.5e-12 Score=98.84 Aligned_cols=128 Identities=9% Similarity=0.032 Sum_probs=80.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-------------C------CC---------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-------------G------WF--------------- 53 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-------------~------~~--------------- 53 (176)
.++++|||||+|+||++++++|+ ++|++|++++|+... . ..
T Consensus 10 ~~k~vlITGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFA-----ASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVA 84 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhC
Confidence 46899999999999999999999 689999999987421 0 00
Q ss_pred CCCcc------------c----CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCC
Q 030483 54 PTALV------------Q----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 117 (176)
Q Consensus 54 ~~~~v------------~----~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~ 117 (176)
..+.+ . +.+.+.+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~------------- 150 (254)
T 2wsb_A 85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMV-ARGAGAIVNLGSMSGTIV------------- 150 (254)
T ss_dssp CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSC-------------
T ss_pred CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEEecchhccC-------------
Confidence 00001 0 12345688999997776666543210 013578999998755421
Q ss_pred CCccccCCCCCCCCCcchHHH----HHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 118 YEVPFKEDSSRLPFPNFYYEL----EDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 118 ~~~p~~E~~~~~~~~~~y~~~----e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
.| .. +...|... +.+.+. ...+++++++||++++++.
T Consensus 151 --~~------~~-~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~ 196 (254)
T 2wsb_A 151 --NR------PQ-FASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEM 196 (254)
T ss_dssp --CS------SS-CBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred --CC------CC-cchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchh
Confidence 01 00 01233322 222221 3458999999999999874
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.4e-12 Score=102.20 Aligned_cols=128 Identities=13% Similarity=-0.004 Sum_probs=81.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C---------C-C----------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W---------F-P---------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---------~-~---------------- 54 (176)
+.+|++|||||+|+||++++++|+ ++|++|++++|+.... . . .
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 79 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMV-----AEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAF 79 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHc
Confidence 567899999999999999999999 7999999999874210 0 0 0
Q ss_pred --CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCC
Q 030483 55 --TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 116 (176)
Q Consensus 55 --~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~ 116 (176)
.+.+ .+++...+++|+.++.++.+++...+. ..+..+|+++||...|.+
T Consensus 80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~------------ 146 (260)
T 1nff_A 80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMK-EAGRGSIINISSIEGLAG------------ 146 (260)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSC------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEEeehhhcCC------------
Confidence 0001 112345789999998665555443210 013578999998755421
Q ss_pred CCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 117 PYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 117 ~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. + ....|... +.+.+ + ...|+++.++||+.|+++..
T Consensus 147 ---~------~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 191 (260)
T 1nff_A 147 ---T------V---ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT 191 (260)
T ss_dssp ---C------T---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGG
T ss_pred ---C------C---CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcc
Confidence 0 0 11233322 22222 1 34689999999999999853
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.33 E-value=2.4e-12 Score=99.64 Aligned_cols=127 Identities=13% Similarity=0.001 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC------------C------CCC--------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP------------G------WFP-------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~------------~------~~~-------------- 54 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+... . ...
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFV-----EEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEK 78 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHH
Confidence 557899999999999999999999 789999999987421 0 000
Q ss_pred ----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-cEEEEeccceeecccccCCCccC
Q 030483 55 ----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL-RHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 ----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v-~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .+++.+.+++|+.++.++.+++...+. ..+. .+|+++||...|..
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~-~~~~~~~iv~isS~~~~~~--------- 148 (251)
T 1zk4_A 79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMK-NKGLGASIINMSSIEGFVG--------- 148 (251)
T ss_dssp HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHT-TSSSCEEEEEECCGGGTSC---------
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHH-hcCCCCEEEEeCCchhccC---------
Confidence 0001 112345789999987766666544311 1134 78999998755421
Q ss_pred CCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-h--CCCceEEEeccCceEeCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-Y--SPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~--~~g~~~~ivRp~~v~G~~ 163 (176)
. + ....|... +.+.+ + . ..++++.++||++++++.
T Consensus 149 ------~------~---~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~ 194 (251)
T 1zk4_A 149 ------D------P---SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL 194 (251)
T ss_dssp ------C------T---TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred ------C------C---CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchh
Confidence 0 0 11233322 22222 1 2 678999999999999874
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.33 E-value=3.3e-12 Score=99.15 Aligned_cols=128 Identities=9% Similarity=-0.009 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------------CC------------CCCcc
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------------WF------------PTALV 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------------~~------------~~~~v 58 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.... .. ..+.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l 78 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFA-----REGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVL 78 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEE
Confidence 557899999999999999999999 7999999999864210 00 00111
Q ss_pred ----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccc
Q 030483 59 ----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 59 ----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~ 122 (176)
.++++..+++|+.++.++++++...+. ..+..+|+++||...+.. .
T Consensus 79 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~---------------~-- 140 (246)
T 2ag5_A 79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKML-AQKSGNIINMSSVASSVK---------------G-- 140 (246)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCSBTTTB---------------C--
T ss_pred EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCceEEEEechHhCcC---------------C--
Confidence 112345788999999888888764210 013578999988654320 0
Q ss_pred cCCCCCCCCCcchHHH----HHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 123 KEDSSRLPFPNFYYEL----EDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 123 ~E~~~~~~~~~~y~~~----e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
+ +....|... +.+.+. ...++++.++||++|+++.
T Consensus 141 ----~--~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 184 (246)
T 2ag5_A 141 ----V--VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS 184 (246)
T ss_dssp ----C--TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred ----C--CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcc
Confidence 0 011233322 222221 3468999999999999874
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.32 E-value=7.6e-12 Score=96.73 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=32.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~-----~~G~~V~~~~r~~ 36 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFL-----ARGDRVAALDLSA 36 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 35789999999999999999999 7999999999864
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.32 E-value=7.7e-12 Score=98.78 Aligned_cols=137 Identities=9% Similarity=-0.077 Sum_probs=87.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC----------------------CC---------
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----------------------FP--------- 54 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----------------------~~--------- 54 (176)
.+.+|++|||||+|+||++++++|+ +.|++|++++|+..... ..
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 81 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLA-----EEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVR 81 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTT
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHH-----HCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCC
Confidence 3457899999999999999999999 79999999988622100 00
Q ss_pred ------------------CCcc--------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 55 ------------------TALV--------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 55 ------------------~~~v--------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
.+.+ .+++...+++|+.++.++++++...+ .+-.+|+++||...+
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~g~iv~isS~~~~ 158 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYL---TSGASIITTGSVAGL 158 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGC---CTTCEEEEECCHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHh---hcCcEEEEeccchhc
Confidence 0000 12345678999999999999998763 223589999987766
Q ss_pred cccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHH-----H----h-hCCCceEEEeccCceEeCCC
Q 030483 103 MGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVS-----A----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 103 g~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~-----~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
.... ..+..|+.+. ++...|...|.. + + ...|+++.+++|+.|..+..
T Consensus 159 ~~~~------------~~~~~~~~~~--~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~ 216 (287)
T 3pxx_A 159 IAAA------------QPPGAGGPQG--PGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDML 216 (287)
T ss_dssp HHHH------------CCC-----CH--HHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTT
T ss_pred cccc------------ccccccccCC--CccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccc
Confidence 4221 1222233221 112223333222 1 1 34589999999999988754
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=4.1e-12 Score=99.42 Aligned_cols=127 Identities=13% Similarity=0.031 Sum_probs=82.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC--------------C------CCC------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--------------G------WFP------------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--------------~------~~~------------ 54 (176)
+.+|++|||||+|+||++++++|+ ++|++|++++|+... . ...
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFA-----KEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESV 79 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 456899999999999999999999 799999999986421 0 000
Q ss_pred ------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 55 ------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 55 ------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
.+.+ .++++..+++|+.++.++++++...+. ..+..+|+++||...|..
T Consensus 80 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~-------- 150 (263)
T 3ai3_A 80 RSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMR-ARGGGAIIHNASICAVQP-------- 150 (263)
T ss_dssp HHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSC--------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEECchhhcCC--------
Confidence 0001 112355789999998888887754210 013578999998765531
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. + ....|... +.+.+ + ...|+++.++||++|++|.
T Consensus 151 -------~------~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 194 (263)
T 3ai3_A 151 -------L------W---YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPD 194 (263)
T ss_dssp -------C------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred -------C------C---CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 0 0 11223322 22221 1 3468999999999999874
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.1e-11 Score=95.77 Aligned_cols=128 Identities=13% Similarity=0.036 Sum_probs=82.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-------------CCCC---------------CCcc-
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-------------GWFP---------------TALV- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-------------~~~~---------------~~~v- 58 (176)
|+|++|||||+|+||++++++|+ +.|++|++++|+... .... .+.+
T Consensus 1 ~~k~vlVTGas~giG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv 75 (239)
T 2ekp_A 1 MERKALVTGGSRGIGRAIAEALV-----ARGYRVAIASRNPEEAAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLV 75 (239)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEE
Confidence 35789999999999999999999 799999999997421 0000 0111
Q ss_pred ---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcccc
Q 030483 59 ---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 59 ---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~ 123 (176)
.++++..+++|+.++.++++++...+. ..+..+|+++||...|.. .+
T Consensus 76 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~---------------~~-- 137 (239)
T 2ekp_A 76 HAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMA-EAGWGRVLFIGSVTTFTA---------------GG-- 137 (239)
T ss_dssp ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSC---------------CT--
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEECchhhccC---------------CC--
Confidence 112456789999998888887754210 013578999998765531 00
Q ss_pred CCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 124 EDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 124 E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ +....|... +.+.+ + ...|+++.++||+.+.++.
T Consensus 138 ---~--~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 181 (239)
T 2ekp_A 138 ---P--VPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEF 181 (239)
T ss_dssp ---T--SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred ---C--CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCch
Confidence 0 111233322 22221 1 3468999999999998774
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.2e-11 Score=95.35 Aligned_cols=124 Identities=10% Similarity=-0.005 Sum_probs=82.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-----------------------------CCCcc
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-----------------------------PTALV 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-----------------------------~~~~v 58 (176)
++|++|||||+|+||++++++|+ ++|++|++++|+...... ..+.+
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l 76 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFK-----KNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 76 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHH-----HTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 46789999999999999999999 799999999998643110 00001
Q ss_pred -----------c-C-----cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcc
Q 030483 59 -----------Q-E-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 59 -----------~-~-----~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p 121 (176)
. . +++..+++|+.++.++++++...+. +-.+|+++||...+. +
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~-----------------~ 136 (236)
T 1ooe_A 77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLK---PGGLLQLTGAAAAMG-----------------P 136 (236)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEECCGGGGS-----------------C
T ss_pred EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhc---cCCEEEEECchhhcc-----------------C
Confidence 0 1 1245688999999999999887521 125899998865432 0
Q ss_pred ccCCCCCCCCCcchHHH----HHHHHh-----h--CCCceEEEeccCceEeCC
Q 030483 122 FKEDSSRLPFPNFYYEL----EDVSAS-----Y--SPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 122 ~~E~~~~~~~~~~y~~~----e~~~~~-----~--~~g~~~~ivRp~~v~G~~ 163 (176)
. +....|... +.+.+. . ..++++.++||+++.++.
T Consensus 137 ----~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~ 182 (236)
T 1ooe_A 137 ----T---PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM 182 (236)
T ss_dssp ----C---TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred ----C---CCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc
Confidence 0 111223322 222221 2 457999999999998763
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.5e-11 Score=96.87 Aligned_cols=126 Identities=14% Similarity=0.076 Sum_probs=81.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCC---------------------------CCcc-
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP---------------------------TALV- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~---------------------------~~~v- 58 (176)
..+|++|||||+|+||++++++|+ +.|++|++++|+....... .+.+
T Consensus 12 ~~~k~vlVTGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 86 (269)
T 3vtz_A 12 FTDKVAIVTGGSSGIGLAVVDALV-----RYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILV 86 (269)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 357899999999999999999999 7999999999976432110 0000
Q ss_pred ---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcccc
Q 030483 59 ---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 59 ---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~ 123 (176)
.+++...+++|+.++.++++++...+. ..+..+||++||...|...
T Consensus 87 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~~------------------ 147 (269)
T 3vtz_A 87 NNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVML-AIGHGSIINIASVQSYAAT------------------ 147 (269)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSBC------------------
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCCEEEEECchhhccCC------------------
Confidence 112345788999999888888665310 0134689999987655310
Q ss_pred CCCCCCCCCcchHHH----HHHHH----hhCCCceEEEeccCceEeC
Q 030483 124 EDSSRLPFPNFYYEL----EDVSA----SYSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 124 E~~~~~~~~~~y~~~----e~~~~----~~~~g~~~~ivRp~~v~G~ 162 (176)
+....|... +.+.+ +...++++.+++|+.|.++
T Consensus 148 ------~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~ 188 (269)
T 3vtz_A 148 ------KNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTP 188 (269)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCH
T ss_pred ------CCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCc
Confidence 011233322 22221 2233799999999999876
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.30 E-value=1.2e-11 Score=96.41 Aligned_cols=122 Identities=10% Similarity=-0.046 Sum_probs=79.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC------------CCCC----------CCCcc-------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP------------PGWF----------PTALV------- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~------------~~~~----------~~~~v------- 58 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.. +... ..+.+
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLS-----QEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGP 92 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHhhCCeEEEeeHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 57899999999999999999999 79999999998641 1100 01111
Q ss_pred ---------cCcHHHHHHHHHHHHHHHHHH----HHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC
Q 030483 59 ---------QESEEVNIFKNSTMLKNVLSV----LVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 59 ---------~~~~~~~~~~N~~~t~~ll~a----~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
.+++...+++|+.++.++.++ +++. +..+|+++||...|.. .
T Consensus 93 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~---------------~----- 147 (249)
T 1o5i_A 93 KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-----GWGRIVAITSFSVISP---------------I----- 147 (249)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSC---------------C-----
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcchHhcCC---------------C-----
Confidence 112345788999886655444 4443 3578999998765531 0
Q ss_pred CCCCCCCcchHHH----HHHH----Hh-hCCCceEEEeccCceEeCC
Q 030483 126 SSRLPFPNFYYEL----EDVS----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 126 ~~~~~~~~~y~~~----e~~~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+....|... +.+. .+ ...|+++.++||+.|.++.
T Consensus 148 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 190 (249)
T 1o5i_A 148 ----ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETER 190 (249)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCc
Confidence 011223222 2111 12 3568999999999999874
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.30 E-value=2.9e-11 Score=95.53 Aligned_cols=129 Identities=14% Similarity=-0.014 Sum_probs=83.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------------C-CC---------
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------------W-FP--------- 54 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------------~-~~--------- 54 (176)
.+.+|++|||||+|+||++++++|+ +.|++|++++|+.... . ..
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 81 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALA-----EAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVK 81 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 3457899999999999999999999 7999999999963210 0 00
Q ss_pred C------------------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 55 T------------------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 55 ~------------------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
+ +.+ .+++++.+++|+.++.++++++...+. ..+..+||++||..
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~ 160 (281)
T 3s55_A 82 DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMI-KRNYGRIVTVSSML 160 (281)
T ss_dssp CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGG
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCCEEEEECChh
Confidence 0 000 113456789999999998888654210 01346899999865
Q ss_pred eecccccCCCccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 101 HYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 101 ~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+.. . + ....|... +.+.+ | ..+|+++.+++|++|++|..
T Consensus 161 ~~~~---------------~------~---~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 209 (281)
T 3s55_A 161 GHSA---------------N------F---AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMT 209 (281)
T ss_dssp GGSC---------------C------T---TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTT
T ss_pred hcCC---------------C------C---CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccc
Confidence 5421 0 0 11233322 21221 2 35689999999999999864
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=2.3e-12 Score=100.74 Aligned_cols=129 Identities=15% Similarity=0.088 Sum_probs=83.1
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------------------CCC-----------
Q 030483 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------------------WFP----------- 54 (176)
Q Consensus 5 ~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------------~~~----------- 54 (176)
..+.+|++|||||+|+||++++++|+ ++|++|++++|+.... ...
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLA-----QDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAM 84 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence 33557899999999999999999999 7999999999874210 000
Q ss_pred -------CCcc------c-----------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCC
Q 030483 55 -------TALV------Q-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 110 (176)
Q Consensus 55 -------~~~v------~-----------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~ 110 (176)
.+.+ . ++++..+++|+.++.++++++...+. ..+..+|+++||...|..
T Consensus 85 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~------ 157 (260)
T 2zat_A 85 AVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEME-KRGGGSVLIVSSVGAYHP------ 157 (260)
T ss_dssp HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTTCEEEEEECCGGGTSC------
T ss_pred HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCCEEEEEechhhcCC------
Confidence 0000 0 12345789999999888888754210 013578999998765421
Q ss_pred ccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 111 LAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 111 ~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. +....|... +.+.+ + ...++++.+++|+.+..+.
T Consensus 158 ---------~---------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 201 (260)
T 2zat_A 158 ---------F---------PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNF 201 (260)
T ss_dssp ---------C---------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSST
T ss_pred ---------C---------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCcc
Confidence 0 011223322 22222 1 3468999999999998764
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.4e-12 Score=100.33 Aligned_cols=127 Identities=12% Similarity=0.033 Sum_probs=83.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC--------------------CC-----C-C------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--------------------GW-----F-P------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--------------------~~-----~-~------ 54 (176)
++++++|||||+|+||++++++|+ ++|++|++++|+... .. . .
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 79 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLA-----GEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAAR 79 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHH
Confidence 567899999999999999999999 789999999986321 00 0 0
Q ss_pred ------------C-Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCC-ccEEEEeccceeecc
Q 030483 55 ------------T-ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHYMG 104 (176)
Q Consensus 55 ------------~-~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~-v~~vv~~Ss~~~yg~ 104 (176)
. +.+ .+++...+++|+.++.++++++...+. ..+ ..+|+++||...+..
T Consensus 80 ~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~g~iv~isS~~~~~~ 158 (264)
T 2pd6_A 80 CLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALV-SNGCRGSIINISSIVGKVG 158 (264)
T ss_dssp HHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCCEEEEEECCTHHHHC
T ss_pred HHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH-hcCCCceEEEECChhhccC
Confidence 0 111 012345789999999999998876410 001 358999988644320
Q ss_pred cccCCCccCCCCCCCccccCCCCCCCCCcchHHHHH-----HHHh-----hCCCceEEEeccCceEeCCC
Q 030483 105 PIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 105 ~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~-----~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
. + +...|...| +.+. ...++++.++||++++++..
T Consensus 159 ---------------~------~----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 203 (264)
T 2pd6_A 159 ---------------N------V----GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMT 203 (264)
T ss_dssp ---------------C------T----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-
T ss_pred ---------------C------C----CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccch
Confidence 0 0 122233222 2221 34689999999999999864
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.5e-12 Score=100.67 Aligned_cols=134 Identities=11% Similarity=-0.044 Sum_probs=81.9
Q ss_pred CCcCCCC---CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C--C--------C-------
Q 030483 1 MEKQDQN---PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W--F--------P------- 54 (176)
Q Consensus 1 ~~~~~~~---~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~--------~------- 54 (176)
|.++..+ .+|++|||||+|+||++++++|+ +.|++|++++|+.... . . .
T Consensus 1 ~~~m~~~~~l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~ 75 (263)
T 3ak4_A 1 GSHMAGIFDLSGRKAIVTGGSKGIGAAIARALD-----KAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDA 75 (263)
T ss_dssp -----CTTCCTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHH
T ss_pred CCCcccCcCCCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHH
Confidence 4555533 46899999999999999999999 7999999999864210 0 0 0
Q ss_pred -----------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeeccccc
Q 030483 55 -----------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 107 (176)
Q Consensus 55 -----------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~ 107 (176)
.+.+ .+++...+++|+.++.++++++...+.......+|+++||...+.
T Consensus 76 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---- 151 (263)
T 3ak4_A 76 AMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV---- 151 (263)
T ss_dssp HHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS----
T ss_pred HHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc----
Confidence 0001 112355789999999888888765421011146899998864431
Q ss_pred CCCccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 108 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 108 d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. .+ ....|... +.+.+ + ...|+++.++||+.|+++.
T Consensus 152 -----------~------~~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 196 (263)
T 3ak4_A 152 -----------G------AP---LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAM 196 (263)
T ss_dssp -----------C------CT---TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHH
T ss_pred -----------C------CC---CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChh
Confidence 0 01 11233322 22221 1 3468999999999998763
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.30 E-value=4.3e-12 Score=97.91 Aligned_cols=126 Identities=11% Similarity=0.038 Sum_probs=82.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-------EEEEEecCCCCC----------CC---------C--------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARRPPPG----------WF---------P-------- 54 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-------~V~~l~R~~~~~----------~~---------~-------- 54 (176)
+|++|||||+|+||++++++|+ +.|+ +|++++|+.... .. .
T Consensus 2 ~k~vlITGasggiG~~la~~l~-----~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 76 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFA-----RAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRL 76 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHH-----HHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHH-----HhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHH
Confidence 5789999999999999999999 6898 999999864210 00 0
Q ss_pred ----------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccC
Q 030483 55 ----------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 108 (176)
Q Consensus 55 ----------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d 108 (176)
.+.+ .+++...+++|+.++.++++++...+. ..+..+|+++||...|..
T Consensus 77 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~---- 151 (244)
T 2bd0_A 77 TTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALME-RQHSGHIFFITSVAATKA---- 151 (244)
T ss_dssp HHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSC----
T ss_pred HHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hCCCCEEEEEecchhcCC----
Confidence 0001 112345789999999988888754210 013578999998755421
Q ss_pred CCccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 109 PSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 109 ~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. +....|... +.+.+ + ...++++.++||++|+++..
T Consensus 152 -----------~---------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 196 (244)
T 2bd0_A 152 -----------F---------RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMW 196 (244)
T ss_dssp -----------C---------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTT
T ss_pred -----------C---------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhh
Confidence 0 011223322 22221 2 35789999999999999864
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.29 E-value=2.1e-12 Score=101.02 Aligned_cols=128 Identities=16% Similarity=0.039 Sum_probs=83.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------------CC---------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------------WF--------------- 53 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------------~~--------------- 53 (176)
+.+|++|||||+|+||++++++|+ ++|++|++++|+.... ..
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYV-----REGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 456899999999999999999999 7999999999864210 00
Q ss_pred -CCCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCC
Q 030483 54 -PTALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 116 (176)
Q Consensus 54 -~~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~ 116 (176)
..+.+ .+++++.+++|+.++.++++++...+.....-.+|+++||...+..
T Consensus 81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------ 148 (259)
T 4e6p_A 81 GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG------------ 148 (259)
T ss_dssp SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC------------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC------------
Confidence 00001 1234567889999999998887654100001358999988654421
Q ss_pred CCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 117 PYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 117 ~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. +....|... +.+.+ + ...++++.+++|+.|++|.
T Consensus 149 ---~---------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 192 (259)
T 4e6p_A 149 ---E---------ALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEH 192 (259)
T ss_dssp ---C---------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTT
T ss_pred ---C---------CCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccch
Confidence 0 011223322 22222 1 3568999999999999874
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.29 E-value=4.4e-12 Score=97.33 Aligned_cols=126 Identities=13% Similarity=-0.046 Sum_probs=74.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C------CC------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W------FP------------------ 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~------~~------------------ 54 (176)
|++++|||||+|+||++++++|+ ++|++|++++|+.... . ..
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLH-----AKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGE 78 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999 7999999999864210 0 00
Q ss_pred CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 55 TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 55 ~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
.+.+ .+++...+++|+.++.++++++...+. ..+.++|+++||...|.
T Consensus 79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~--------------- 142 (234)
T 2ehd_A 79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALL-RRGGGTIVNVGSLAGKN--------------- 142 (234)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-TTTCEEEEEECCTTTTS---------------
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCcEEEEECCchhcC---------------
Confidence 0001 112345788999988766655543210 11467899999865432
Q ss_pred CccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 119 EVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ . +....|... +.+.+ + ...++++.++||+.+..+.
T Consensus 143 --~------~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 187 (234)
T 2ehd_A 143 --P------F-KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGF 187 (234)
T ss_dssp --C------C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------
T ss_pred --C------C-CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence 0 0 011233222 21221 2 3568999999999997653
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.1e-11 Score=96.33 Aligned_cols=88 Identities=9% Similarity=0.051 Sum_probs=65.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------------------CCCCcc---------c
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------------------FPTALV---------Q 59 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------------------~~~~~v---------~ 59 (176)
|++|||||+|+||++++++|+ ++|++|++++|+..... ...+.+ .
T Consensus 2 k~vlVTGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~~ 76 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLE-----AAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT 76 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTC
T ss_pred CEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCCCc
Confidence 589999999999999999999 79999999999764210 000111 2
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeec
Q 030483 60 ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 103 (176)
Q Consensus 60 ~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg 103 (176)
..++..+++|+.++.++++++...+. ..+..+||++||...|.
T Consensus 77 ~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~ 119 (257)
T 1fjh_A 77 KVLGNVVSVNYFGATELMDAFLPALK-KGHQPAAVVISSVASAH 119 (257)
T ss_dssp SSHHHHHHHHTHHHHHHHHHHHHHHH-TSSSCEEEEECCGGGGS
T ss_pred ccHHHHHHHhhHHHHHHHHHHHHHHh-hcCCcEEEEECChhhhc
Confidence 24577899999999999888875321 11347899999987773
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.29 E-value=4.1e-12 Score=100.85 Aligned_cols=123 Identities=14% Similarity=0.125 Sum_probs=75.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-CC-------------CCCCcc---cCcHHH---HHH-
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW-------------FPTALV---QESEEV---NIF- 67 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-~~-------------~~~~~v---~~~~~~---~~~- 67 (176)
+++|||||||||||++|+++|+ +.|++|++++|++.. .. .....+ ..+++. .++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~ 76 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASI-----KAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQ 76 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-----HHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred CcEEEEECCCchHHHHHHHHHH-----hCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhC
Confidence 3679999999999999999999 689999999998611 00 011111 111111 110
Q ss_pred ----------HHHHHHHHHHHHHHhcCCCCCC-ccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchH
Q 030483 68 ----------KNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYY 136 (176)
Q Consensus 68 ----------~N~~~t~~ll~a~~~~~~~~~~-v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~ 136 (176)
.++.++.++++++++. + +++|++ | .||.. .+|+.+..| ....|
T Consensus 77 ~d~vi~~a~~~~~~~~~~l~~aa~~~-----g~v~~~v~-S---~~g~~----------------~~~~~~~~p-~~~~y 130 (307)
T 2gas_A 77 VDIVICAAGRLLIEDQVKIIKAIKEA-----GNVKKFFP-S---EFGLD----------------VDRHDAVEP-VRQVF 130 (307)
T ss_dssp CSEEEECSSSSCGGGHHHHHHHHHHH-----CCCSEEEC-S---CCSSC----------------TTSCCCCTT-HHHHH
T ss_pred CCEEEECCcccccccHHHHHHHHHhc-----CCceEEee-c---ccccC----------------cccccCCCc-chhHH
Confidence 0145678999999987 5 788873 2 35411 123333221 12334
Q ss_pred HHHHHHHh---hCCCceEEEeccCceEeCC
Q 030483 137 ELEDVSAS---YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 137 ~~e~~~~~---~~~g~~~~ivRp~~v~G~~ 163 (176)
..|...+ +..+++++++||+.++|+.
T Consensus 131 -~sK~~~e~~~~~~~i~~~~lrp~~~~~~~ 159 (307)
T 2gas_A 131 -EEKASIRRVIEAEGVPYTYLCCHAFTGYF 159 (307)
T ss_dssp -HHHHHHHHHHHHHTCCBEEEECCEETTTT
T ss_pred -HHHHHHHHHHHHcCCCeEEEEcceeeccc
Confidence 3333322 3568999999999988754
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.1e-11 Score=98.74 Aligned_cols=126 Identities=13% Similarity=0.005 Sum_probs=81.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC------------------C------CCC--------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP------------------G------WFP-------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~------------------~------~~~-------- 54 (176)
+.++++|||||+|+||++++++|+ +.|++|++++|+... . ...
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 90 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELL-----ELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL 90 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHH
Confidence 346899999999999999999999 799999999987321 0 000
Q ss_pred ----------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccC
Q 030483 55 ----------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 108 (176)
Q Consensus 55 ----------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d 108 (176)
.+.+ .+++...+++|+.++.++++++...+- ..+..+|+++||...++
T Consensus 91 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~----- 164 (303)
T 1yxm_A 91 VKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWM-KEHGGSIVNIIVPTKAG----- 164 (303)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTH-HHHCEEEEEECCCCTTC-----
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HhcCCeEEEEEeecccC-----
Confidence 0001 012345689999999999999766200 01236789988765211
Q ss_pred CCccCCCCCCCccccCCCCCCCCCcchHHH----H---HHHH-h-hCCCceEEEeccCceEeCC
Q 030483 109 PSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----E---DVSA-S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 109 ~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e---~~~~-~-~~~g~~~~ivRp~~v~G~~ 163 (176)
.| ....|... + +.+. + ...|+++.++||++|+|+.
T Consensus 165 -----------~~---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (303)
T 1yxm_A 165 -----------FP---------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT 208 (303)
T ss_dssp -----------CT---------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred -----------CC---------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence 00 11223221 1 1111 2 3458999999999999984
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.29 E-value=9.8e-12 Score=100.72 Aligned_cols=129 Identities=17% Similarity=0.159 Sum_probs=79.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------------CC-----------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------------FP----------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------------~~----------------- 54 (176)
|.+|++|||||+|+||++++++|+ ++|++|++.+|+..... ..
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~-----~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~ 77 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALA-----GAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRA 77 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHH
Confidence 446899999999999999999999 79999999988732100 00
Q ss_pred ----------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccC
Q 030483 55 ----------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 108 (176)
Q Consensus 55 ----------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d 108 (176)
.+.+ .+++...+++|+.++.++++++...+. ..+..+||++||...+...
T Consensus 78 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~-~~~~g~iV~isS~~~~~~~--- 153 (324)
T 3u9l_A 78 IDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMR-RQKHGLLIWISSSSSAGGT--- 153 (324)
T ss_dssp HHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSCC---
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEEecchhccCC---
Confidence 0000 112345789999999999998843210 0135789999886554211
Q ss_pred CCccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 109 PSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 109 ~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. +....|... +.+.+ | ...|+++++++|+.|.++..
T Consensus 154 -----------~---------~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~ 198 (324)
T 3u9l_A 154 -----------P---------PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN 198 (324)
T ss_dssp -----------C---------SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred -----------C---------CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence 0 011234332 22221 2 35799999999999987653
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.28 E-value=8.7e-12 Score=97.33 Aligned_cols=126 Identities=10% Similarity=-0.033 Sum_probs=82.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC---------C------CC----------------CC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP---------G------WF----------------PT 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~---------~------~~----------------~~ 55 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+... . .. ..
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 78 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFA-----REGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRV 78 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCChhHHHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 557899999999999999999999 799999999997531 0 00 00
Q ss_pred Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCC
Q 030483 56 ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 119 (176)
Q Consensus 56 ~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~ 119 (176)
+.+ .+++.+.+++|+.++.++++++...+. ..+..+|+++||...+.
T Consensus 79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~-~~~~g~iv~isS~~~~~---------------- 141 (256)
T 2d1y_A 79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMR-KVGGGAIVNVASVQGLF---------------- 141 (256)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-TTTCEEEEEECCGGGTS----------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEEccccccC----------------
Confidence 111 112356789999999999888765321 11357899998865431
Q ss_pred ccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeC
Q 030483 120 VPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 120 ~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~ 162 (176)
+. + ....|... +.+.+ + ...++++.+++|+.+..+
T Consensus 142 -~~----~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 185 (256)
T 2d1y_A 142 -AE----Q---ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE 185 (256)
T ss_dssp -BC----T---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred -CC----C---CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCc
Confidence 00 0 11223322 22221 1 346899999999999765
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1e-11 Score=97.14 Aligned_cols=126 Identities=14% Similarity=0.095 Sum_probs=81.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------------C-------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------------W------------- 52 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------------~------------- 52 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.... .
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELA-----SLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVA 81 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 557899999999999999999999 7999999999864210 0
Q ss_pred ----CCCCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 53 ----FPTALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 53 ----~~~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
...+.+ .+++...+++|+.++.++++++...+. ..+..+|+++||...+.
T Consensus 82 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~--------- 151 (260)
T 2ae2_A 82 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLK-ASERGNVVFISSVSGAL--------- 151 (260)
T ss_dssp HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTSSEEEEEECCGGGTS---------
T ss_pred HHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEcchhhcc---------
Confidence 000001 112345788999999999888854210 11357899999865432
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHH----HHHHHh-----hCCCceEEEeccCceEeC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSAS-----YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~~-----~~~g~~~~ivRp~~v~G~ 162 (176)
+ . +....|... +.+.+. ...++++.+++|+.+.++
T Consensus 152 --------~----~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 195 (260)
T 2ae2_A 152 --------A----V---PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATS 195 (260)
T ss_dssp --------C----C---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSH
T ss_pred --------C----C---CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCc
Confidence 0 0 111233322 222221 345899999999999775
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.28 E-value=2.4e-11 Score=94.70 Aligned_cols=38 Identities=24% Similarity=0.215 Sum_probs=34.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+..
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~-----~~G~~V~~~~r~~~ 39 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLA-----RAGANIVLNGFGDP 39 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEECSSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCch
Confidence 456899999999999999999999 79999999998753
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.1e-11 Score=95.69 Aligned_cols=127 Identities=13% Similarity=0.106 Sum_probs=82.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC---------C--------CC------------CCCc
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP---------G--------WF------------PTAL 57 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~---------~--------~~------------~~~~ 57 (176)
+.++++|||||+|+||++++++|+ +.|++|++++|+... . .. ..+.
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 79 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALH-----ATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDL 79 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred cCCcEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCE
Confidence 456899999999999999999999 799999999986421 0 00 0011
Q ss_pred c----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCC-ccEEEEeccceeecccccCCCccCCCCCCCc
Q 030483 58 V----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 120 (176)
Q Consensus 58 v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~-v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~ 120 (176)
+ .+.++..+++|+.++.++++++...+. ..+ ..+|+++||...+..
T Consensus 80 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~-~~~~~~~iv~~sS~~~~~~---------------- 142 (244)
T 3d3w_A 80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLI-ARGVPGAIVNVSSQCSQRA---------------- 142 (244)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCCEEEEEECCGGGTSC----------------
T ss_pred EEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCCcEEEEeCchhhccC----------------
Confidence 1 112355789999998888888765310 002 468999998654320
Q ss_pred cccCCCCCCCCCcchHH----HHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 121 PFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 121 p~~E~~~~~~~~~~y~~----~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
. +....|.. .+.+.+. ...++++.++||+.|+++.
T Consensus 143 -----~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~ 186 (244)
T 3d3w_A 143 -----V---TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM 186 (244)
T ss_dssp -----C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTT
T ss_pred -----C---CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccc
Confidence 0 01122322 2222222 2468999999999999875
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.1e-11 Score=97.98 Aligned_cols=126 Identities=16% Similarity=0.063 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CC---------C-------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WF---------P------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~---------~------------- 54 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.... .. .
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 94 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLG-----KEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVV 94 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 456899999999999999999999 7999999999874210 00 0
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhc--CCCCCCccEEEEeccceeecccccCCCc
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSS--NSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~--~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
.+.+ .+++...+++|+.++.++++++... +. ..+..+||++||...+.
T Consensus 95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~-~~~~g~iv~isS~~~~~-------- 165 (277)
T 2rhc_B 95 ERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGML-ERGTGRIVNIASTGGKQ-------- 165 (277)
T ss_dssp HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHH-HHTEEEEEEECCGGGTS--------
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHh-hcCCeEEEEECcccccc--------
Confidence 0001 1123567899999999999887653 10 01357899998864431
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~ 162 (176)
+ .+ ....|... +.+.+ + ...++++.++||+.+.++
T Consensus 166 ---------~----~~---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 209 (277)
T 2rhc_B 166 ---------G----VV---HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 209 (277)
T ss_dssp ---------C----CT---TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSH
T ss_pred ---------C----CC---CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCc
Confidence 0 00 11223322 22221 2 356899999999999876
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.3e-11 Score=97.21 Aligned_cols=127 Identities=11% Similarity=0.016 Sum_probs=83.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-------C-------C-------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F-------P------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------~-------~------------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+..... . +
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLA-----RAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFG 84 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999 79999999999864310 0 0
Q ss_pred -CCcc------c------------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 55 -TALV------Q------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 55 -~~~v------~------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
.+.+ . +.++..+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~iv~isS~~~~~~----------- 152 (271)
T 3tzq_B 85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLI-SAGGGAIVNISSATAHAA----------- 152 (271)
T ss_dssp CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCEEEEEECCGGGTSB-----------
T ss_pred CCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEECCHHHcCC-----------
Confidence 0000 1 12345789999999999988843210 013468999998655421
Q ss_pred CCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+ ....|... +.+.+ + ..+|+++.+++|+.|+++..
T Consensus 153 ----------~~---~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~ 197 (271)
T 3tzq_B 153 ----------YD---MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRL 197 (271)
T ss_dssp ----------CS---SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred ----------CC---CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccc
Confidence 00 11233322 22221 1 34689999999999998864
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.6e-12 Score=103.81 Aligned_cols=129 Identities=16% Similarity=0.083 Sum_probs=81.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------C--C------C--C----------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------W--F------P--T---------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~--~------~--~---------- 55 (176)
+.++++|||||+|+||++++++|+ +.|++|++++|+.... . . + +
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~-----~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 80 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLL-----NQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADE 80 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEcCCchHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 457899999999999999999999 7999999999974310 0 0 0 0
Q ss_pred --------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCccEEEEeccceeecccc
Q 030483 56 --------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNS-----GRSRLRHVALLTGTKHYMGPI 106 (176)
Q Consensus 56 --------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~-----~~~~v~~vv~~Ss~~~yg~~~ 106 (176)
+.+ .+++...+++|+.++.++++++...+. ...+-.+||++||...+..
T Consensus 81 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~-- 158 (319)
T 3ioy_A 81 VEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA-- 158 (319)
T ss_dssp HHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC--
T ss_pred HHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC--
Confidence 000 112456789999999999988876510 0001347999998755421
Q ss_pred cCCCccCCCCCCCccccCCCCCCCCCcchHHHHH--------HHHh-hCCCceEEEeccCceEeCCC
Q 030483 107 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED--------VSAS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 107 ~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~--------~~~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. +....|...+. +..+ ...|+++++++|+.|.++-.
T Consensus 159 -------------~---------~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 203 (319)
T 3ioy_A 159 -------------A---------GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIY 203 (319)
T ss_dssp -------------C---------SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC----
T ss_pred -------------C---------CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcc
Confidence 0 11123333222 1122 35689999999999987643
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.7e-11 Score=95.26 Aligned_cols=126 Identities=17% Similarity=0.086 Sum_probs=81.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--------C------------------CCcc--
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------P------------------TALV-- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------~------------------~~~v-- 58 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+...... . .+.+
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~ 87 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLA-----ADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVS 87 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 346899999999999999999999 799999999997543210 0 0111
Q ss_pred --------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 59 --------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 59 --------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
.++++..+++|+.++.++++++...+. ..+..+|+++||...+.+ .
T Consensus 88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~---------------~---- 147 (247)
T 1uzm_A 88 NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQ-RNKFGRMIFIGSVSGLWG---------------I---- 147 (247)
T ss_dssp ECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTTCEEEEEECCCCC-----------------------
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCCEEEEECCHhhccC---------------C----
Confidence 113456789999999888888765311 113578999998654310 0
Q ss_pred CCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeC
Q 030483 125 DSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 125 ~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~ 162 (176)
+ ....|... +.+.+ + ...++++.+++|+.|..+
T Consensus 148 --~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 189 (247)
T 1uzm_A 148 --G---NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTD 189 (247)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred --C---CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCccc
Confidence 0 11223322 21221 2 346899999999999765
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=7.4e-12 Score=99.76 Aligned_cols=124 Identities=14% Similarity=-0.052 Sum_probs=84.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CC-C---------C------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WF-P---------T------------ 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~-~---------~------------ 55 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... .. . +
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFA-----KEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETV 120 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 7999999999875310 00 0 0
Q ss_pred ------Ccc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 56 ------ALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 56 ------~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
+.+ .+++...+++|+.++.++++++...+ .+-.+|+++||...|...
T Consensus 121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~---~~~g~iv~isS~~~~~~~------- 190 (291)
T 3ijr_A 121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHL---KQGDVIINTASIVAYEGN------- 190 (291)
T ss_dssp HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTC---CTTCEEEEECCTHHHHCC-------
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH---hhCCEEEEEechHhcCCC-------
Confidence 000 11235678999999999999998763 123589999987665310
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ ....|... +.+.+ | ...|+++.+++|+.|+++.
T Consensus 191 --------------~---~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 233 (291)
T 3ijr_A 191 --------------E---TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL 233 (291)
T ss_dssp --------------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTH
T ss_pred --------------C---CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCc
Confidence 0 11223322 22221 2 3568999999999998873
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.6e-11 Score=96.19 Aligned_cols=41 Identities=29% Similarity=0.137 Sum_probs=34.7
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|.++ +.+|++|||||+|+||++++++|+ ++|++|++++|+.
T Consensus 1 M~~m--~~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~ 41 (267)
T 2gdz_A 1 MAHM--VNGKVALVTGAAQGIGRAFAEALL-----LKGAKVALVDWNL 41 (267)
T ss_dssp -CCC--CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCcc--cCCCEEEEECCCCcHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 5443 346899999999999999999999 7999999999874
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.2e-11 Score=95.22 Aligned_cols=126 Identities=17% Similarity=0.068 Sum_probs=81.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--------C------------------CCcc---
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------P------------------TALV--- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------~------------------~~~v--- 58 (176)
++|++|||||+|+||++++++|+ ++|++|++++|+...... . .+.+
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~n 94 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFA-----DAGDKVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIAN 94 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSSCCCTTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCChHhhccceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 56899999999999999999999 799999999997543210 0 0111
Q ss_pred -------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC
Q 030483 59 -------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 59 -------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
.++++..+++|+.++.++++++...+. ..+..+|+++||...+. ..|
T Consensus 95 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-~~~~g~iv~isS~~~~~---------------~~~---- 154 (253)
T 2nm0_A 95 AGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAML-RAKKGRVVLISSVVGLL---------------GSA---- 154 (253)
T ss_dssp CSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHH-HHTCEEEEEECCCCCCC---------------CHH----
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCEEEEECchhhCC---------------CCC----
Confidence 224567889999999888887664310 01346899998864431 000
Q ss_pred CCCCCCCcchHHH----HHHH----Hh-hCCCceEEEeccCceEeCC
Q 030483 126 SSRLPFPNFYYEL----EDVS----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 126 ~~~~~~~~~y~~~----e~~~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
....|... +.+. .+ ...++++.+++|+.|..+.
T Consensus 155 -----~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 196 (253)
T 2nm0_A 155 -----GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDM 196 (253)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC--
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence 01123222 1112 12 3568999999999987654
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.26 E-value=5.9e-12 Score=98.47 Aligned_cols=128 Identities=9% Similarity=-0.080 Sum_probs=81.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC---------------C------CCC-----------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP---------------G------WFP----------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~---------------~------~~~----------- 54 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+... . ...
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELA-----RNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEK 79 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHH
Confidence 456899999999999999999999 789999999987421 0 000
Q ss_pred ------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 55 ------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 55 ------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
.+.+ .+++...+++|+.++.++.+++...+. ..+..+|+++||...|...
T Consensus 80 ~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~~------- 151 (260)
T 2z1n_A 80 ARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMV-EKGWGRMVYIGSVTLLRPW------- 151 (260)
T ss_dssp HHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSCC-------
T ss_pred HHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEECchhhcCCC-------
Confidence 0111 112356789999998666666543210 0135789999987654210
Q ss_pred CCCCCCCccccCCCCCCCCCcchHH----HHHHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYE----LEDVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~----~e~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+....|.. .+.+. .+ ...|+++.++||++|+++..
T Consensus 152 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 195 (260)
T 2z1n_A 152 -----------------QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRV 195 (260)
T ss_dssp -----------------TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCC
T ss_pred -----------------CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchh
Confidence 01122322 12222 12 35689999999999998753
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.26 E-value=3.1e-12 Score=102.43 Aligned_cols=122 Identities=12% Similarity=0.095 Sum_probs=74.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC-CCC------------CCCCCcc---cCcHHH---HHH--
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP-PPG------------WFPTALV---QESEEV---NIF-- 67 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~-~~~------------~~~~~~v---~~~~~~---~~~-- 67 (176)
+|+|||||||||||++|+++|+ +.|++|++++|++ ... ......+ ..+++. .++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~ 78 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASL-----SFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQV 78 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHH-----HTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC
T ss_pred ccEEEEEcCCchhHHHHHHHHH-----hCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCC
Confidence 4679999999999999999999 6899999999986 210 0011111 111111 110
Q ss_pred ---------HHHHHHHHHHHHHHhcCCCCCC-ccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHH
Q 030483 68 ---------KNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE 137 (176)
Q Consensus 68 ---------~N~~~t~~ll~a~~~~~~~~~~-v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~ 137 (176)
.++.++.++++++.+. + +++||+ | +||. ..+|+.+..|. ...|
T Consensus 79 d~vi~~a~~~~~~~~~~l~~aa~~~-----g~v~~~v~--S--~~g~----------------~~~~~~~~~p~-~~~y- 131 (321)
T 3c1o_A 79 DIVISALPFPMISSQIHIINAIKAA-----GNIKRFLP--S--DFGC----------------EEDRIKPLPPF-ESVL- 131 (321)
T ss_dssp SEEEECCCGGGSGGGHHHHHHHHHH-----CCCCEEEC--S--CCSS----------------CGGGCCCCHHH-HHHH-
T ss_pred CEEEECCCccchhhHHHHHHHHHHh-----CCccEEec--c--cccc----------------CccccccCCCc-chHH-
Confidence 1245678999999987 5 788872 2 3541 11333332111 2234
Q ss_pred HHHHHHh---hCCCceEEEeccCceEeC
Q 030483 138 LEDVSAS---YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 138 ~e~~~~~---~~~g~~~~ivRp~~v~G~ 162 (176)
..|...+ +..+++++++||+.++|.
T Consensus 132 ~sK~~~e~~~~~~~~~~~~lrp~~~~~~ 159 (321)
T 3c1o_A 132 EKKRIIRRAIEAAALPYTYVSANCFGAY 159 (321)
T ss_dssp HHHHHHHHHHHHHTCCBEEEECCEEHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEeceeccc
Confidence 3333322 346899999999998875
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.7e-11 Score=96.45 Aligned_cols=130 Identities=15% Similarity=-0.018 Sum_probs=82.8
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC--------------C------CCC---------
Q 030483 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--------------G------WFP--------- 54 (176)
Q Consensus 4 ~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--------------~------~~~--------- 54 (176)
...+.+|++|||||+|+||++++++|+ +.|++|++++|+... . ...
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~ 90 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLA-----EAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLL 90 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence 344467899999999999999999999 799999999987321 0 000
Q ss_pred ---------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce-eecccccC
Q 030483 55 ---------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK-HYMGPIFD 108 (176)
Q Consensus 55 ---------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~-~yg~~~~d 108 (176)
.+.+ .++++..+++|+.++.++++++...+. ..+..+||++||.. .+.
T Consensus 91 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-~~~~g~iv~isS~~~~~~----- 164 (267)
T 1vl8_A 91 EAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLR-ESDNPSIINIGSLTVEEV----- 164 (267)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHT-TCSSCEEEEECCGGGTCC-----
T ss_pred HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCcEEEEECCcchhcc-----
Confidence 0001 112345788999999988888765321 12457899998864 210
Q ss_pred CCccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 109 PSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 109 ~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+. +....|... +.+.+ + ...|+++.+++|+.|..+.
T Consensus 165 ------------~~-------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 209 (267)
T 1vl8_A 165 ------------TM-------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM 209 (267)
T ss_dssp ------------CS-------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTT
T ss_pred ------------CC-------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccc
Confidence 10 011233322 22221 1 3468999999999997764
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=5.1e-12 Score=97.53 Aligned_cols=37 Identities=24% Similarity=0.174 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++++|||||+|+||++++++|+ ++|++|++++|+.
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~-----~~G~~V~~~~r~~ 41 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLA-----SAGSTVIITGTSG 41 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSH
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCh
Confidence 457899999999999999999999 7899999999864
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.26 E-value=9.1e-12 Score=97.45 Aligned_cols=124 Identities=15% Similarity=0.007 Sum_probs=81.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC--------------C------CCCC------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--------------G------WFPT------------ 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--------------~------~~~~------------ 55 (176)
.+|++|||||+|+||++++++|+ ++|++|++++|+... . ...+
T Consensus 20 ~~k~vlItGasggiG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 94 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELG-----RRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV 94 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 46799999999999999999999 789999999983211 0 0000
Q ss_pred ------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee-cccccCCCcc
Q 030483 56 ------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY-MGPIFDPSLA 112 (176)
Q Consensus 56 ------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y-g~~~~d~~~~ 112 (176)
+.+ .++++..+++|+.++.++++++...+. .+ .+|+++||...| ..
T Consensus 95 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~-~~iv~~sS~~~~~~~-------- 163 (274)
T 1ja9_A 95 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR--RG-GRIILTSSIAAVMTG-------- 163 (274)
T ss_dssp HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE--EE-EEEEEECCGGGTCCS--------
T ss_pred HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hC-CEEEEEcChHhccCC--------
Confidence 000 012345789999999999999877521 12 689999987654 21
Q ss_pred CCCCCCCccccCCCCCCCCCcchHH----HHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~----~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
.+ ....|.. .+.+.+. ...++++.++||+.++++.
T Consensus 164 -------------~~---~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~ 207 (274)
T 1ja9_A 164 -------------IP---NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM 207 (274)
T ss_dssp -------------CC---SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred -------------CC---CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence 00 1122332 2222222 2458999999999998763
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.26 E-value=9.9e-12 Score=95.71 Aligned_cols=33 Identities=21% Similarity=0.180 Sum_probs=30.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE-ecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~ 47 (176)
|++|||||+|+||++++++|+ ++|++|+++ +|+
T Consensus 2 k~vlITGasggiG~~~a~~l~-----~~G~~v~~~~~r~ 35 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLA-----EDGFALAIHYGQN 35 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-----TTTCEEEEEESSC
T ss_pred CEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCC
Confidence 689999999999999999999 799999998 665
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=6.5e-12 Score=98.03 Aligned_cols=37 Identities=16% Similarity=-0.022 Sum_probs=33.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||++++++|+ ++|++|++++|+.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~ 39 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAV-----AAGARVVLADVLD 39 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 557899999999999999999999 7999999999874
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.25 E-value=6.3e-12 Score=98.00 Aligned_cols=38 Identities=26% Similarity=0.195 Sum_probs=34.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+|++|||||+|+||++++++|+ ++|++|++++|+.
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~-----~~G~~V~~~~r~~ 40 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLL-----GEGAKVAFSDINE 40 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEECSCH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 3567899999999999999999999 7899999999874
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=2.8e-11 Score=94.05 Aligned_cols=127 Identities=17% Similarity=0.088 Sum_probs=78.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC-CCC-------CC---------CC--------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP-PPG-------WF---------PT-------------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~-~~~-------~~---------~~-------------- 55 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+. ... .. .+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFA-----VEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST 79 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 557899999999999999999999 7999999999986 210 00 00
Q ss_pred ----Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 56 ----ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 56 ----~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
+.+ .++++..+++|+.++.++++++...+. ..+..+|+++||...|..
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~----------- 147 (249)
T 2ew8_A 80 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMK-RNGWGRIINLTSTTYWLK----------- 147 (249)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGGSC-----------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCeEEEEEcchhhccC-----------
Confidence 000 112345789999998777777443210 013578999998755421
Q ss_pred CCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. + ....|... +.+.+ + ...++++.+++|+.|.++.
T Consensus 148 ----~------~---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 191 (249)
T 2ew8_A 148 ----I------E---AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT 191 (249)
T ss_dssp ----C------S---SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred ----C------C---CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCcc
Confidence 0 0 11233322 22221 1 3468999999999998875
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.25 E-value=4.1e-11 Score=93.47 Aligned_cols=129 Identities=12% Similarity=0.049 Sum_probs=83.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-------C---------C---------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-------P---------T--------------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-------~---------~--------------- 55 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+...... . +
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLA-----QEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEF 79 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 346899999999999999999999 799999999998643100 0 0
Q ss_pred ---Ccc------c--------------CcHHHHHHHHHHHHHHHHHHHHhcCCCC-----CCccEEEEeccceeeccccc
Q 030483 56 ---ALV------Q--------------ESEEVNIFKNSTMLKNVLSVLVSSNSGR-----SRLRHVALLTGTKHYMGPIF 107 (176)
Q Consensus 56 ---~~v------~--------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~-----~~v~~vv~~Ss~~~yg~~~~ 107 (176)
+.+ . +++...+++|+.++.++++++...+... .+..+|+++||...+.+.
T Consensus 80 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~-- 157 (257)
T 3tpc_A 80 GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ-- 157 (257)
T ss_dssp SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC--
T ss_pred CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC--
Confidence 000 0 1234578999999999999887653110 134679999987654310
Q ss_pred CCCccCCCCCCCccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 108 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 108 d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ ....|...+ .+. .+ ...|+++.+++|+.|.++..
T Consensus 158 -------------------~---~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 201 (257)
T 3tpc_A 158 -------------------I---GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMM 201 (257)
T ss_dssp -------------------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--
T ss_pred -------------------C---CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhh
Confidence 0 112333222 222 12 35689999999999988753
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.24 E-value=1.5e-11 Score=96.87 Aligned_cols=128 Identities=12% Similarity=0.054 Sum_probs=82.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC------------CCC----------C---------
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP------------GWF----------P--------- 54 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~------------~~~----------~--------- 54 (176)
.+++|++|||||+|+||++++++|+ +.|++|++++|+... ... .
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 77 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFA-----REGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEIL 77 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHH
Confidence 3567899999999999999999999 799999999987421 000 0
Q ss_pred ---------CCcc------------c-C----c---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee-ecc
Q 030483 55 ---------TALV------------Q-E----S---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH-YMG 104 (176)
Q Consensus 55 ---------~~~v------------~-~----~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~-yg~ 104 (176)
.+.+ . . + ++..+++|+.++.++++++...+. ..+ .+|+++||... +..
T Consensus 78 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~-g~iv~isS~~~~~~~ 155 (278)
T 1spx_A 78 STTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLS-STK-GEIVNISSIASGLHA 155 (278)
T ss_dssp HHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHT-CEEEEECCTTSSSSC
T ss_pred HHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-hcC-CeEEEEecccccccC
Confidence 0001 0 0 2 234688999999888888766421 012 68999998654 320
Q ss_pred cccCCCccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 105 PIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 105 ~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+ ....|... +.+.+ + ...|+++.++||+.|.++..
T Consensus 156 ---------------------~~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 200 (278)
T 1spx_A 156 ---------------------TP---DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFG 200 (278)
T ss_dssp ---------------------CT---TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-
T ss_pred ---------------------CC---CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccc
Confidence 00 11223322 22221 1 34689999999999998753
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.8e-11 Score=96.41 Aligned_cols=126 Identities=12% Similarity=0.031 Sum_probs=81.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----CC---------CC------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WF---------PT------------------A 56 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~---------~~------------------~ 56 (176)
++|++|||||+|+||++++++|+ +.|++|++++|+.... .. .+ +
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 89 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFS-----EEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPAD 89 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHH-----HTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCC
Confidence 56899999999999999999999 7999999999974210 00 00 0
Q ss_pred cc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCc
Q 030483 57 LV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 120 (176)
Q Consensus 57 ~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~ 120 (176)
.+ .++++..+++|+.++.++++++...+. ..+..+||++||...+..
T Consensus 90 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~-~~~~g~IV~isS~~~~~~---------------- 152 (266)
T 3p19_A 90 AIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMK-ARNCGTIINISSIAGKKT---------------- 152 (266)
T ss_dssp EEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCCEEEEECCGGGTSC----------------
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEEcChhhCCC----------------
Confidence 00 112345789999999887776653210 013468999998655421
Q ss_pred cccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeCC
Q 030483 121 PFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 121 p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. +....|...+ .+. .+ ...|+++.+++|+.|..+.
T Consensus 153 -----~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 196 (266)
T 3p19_A 153 -----F---PDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTEL 196 (266)
T ss_dssp -----C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred -----C---CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccch
Confidence 0 0112333221 111 12 3568999999999998764
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=4.6e-12 Score=98.38 Aligned_cols=127 Identities=16% Similarity=0.069 Sum_probs=82.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-C---------C-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-F---------P------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~---------~------------- 54 (176)
++|++|||||+|+||++++++|+ ++|++|+.++|+.... . . .
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 77 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLA-----EEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVV 77 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 56899999999999999999999 7999999888754210 0 0 0
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .++++..+++|+.++.++++++...+. ..+..+|+++||...+.+
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~--------- 147 (246)
T 3osu_A 78 SQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQML-RQRSGAIINLSSVVGAVG--------- 147 (246)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCHHHHHC---------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCCEEEEEcchhhcCC---------
Confidence 0001 113456789999999999998843210 013468999988655421
Q ss_pred CCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. + ....|... +.+.+ + ...|+++.+++|+.|.++..
T Consensus 148 ------~------~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 192 (246)
T 3osu_A 148 ------N------P---GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT 192 (246)
T ss_dssp ------C------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCC
T ss_pred ------C------C---CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcc
Confidence 0 0 11223322 21221 2 35689999999999998754
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1.5e-11 Score=95.23 Aligned_cols=36 Identities=25% Similarity=0.136 Sum_probs=33.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|++|||||+|+||++++++|+ ++|++|++++|+
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~-----~~G~~V~~~~r~ 40 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFA-----RAGAKVGLHGRK 40 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEECCC
Confidence 456899999999999999999999 799999999998
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.1e-11 Score=99.11 Aligned_cols=127 Identities=15% Similarity=0.001 Sum_probs=81.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C--CC---------C------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W--FP---------T------------ 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~--~~---------~------------ 55 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... . .. +
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFA-----RAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 7999999999975421 0 00 0
Q ss_pred ------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 56 ------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 56 ------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
+.+ .++++..+++|+.++.++++++...+. ..+..+||++||...+.
T Consensus 115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~iV~isS~~~~~---------- 183 (293)
T 3rih_A 115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLT-ASGRGRVILTSSITGPV---------- 183 (293)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHH-HHSSCEEEEECCSBTTT----------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCCEEEEEeChhhcc----------
Confidence 000 113456789999999998888742210 01346899998864321
Q ss_pred CCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
.+ .+ ....|... +.+.+ + ...|+++.+++|++|+++.
T Consensus 184 ------~~----~~---~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 229 (293)
T 3rih_A 184 ------TG----YP---GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEG 229 (293)
T ss_dssp ------BB----CT---TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred ------CC----CC---CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcc
Confidence 00 00 11233222 22221 2 3568999999999999874
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=5.7e-11 Score=93.42 Aligned_cols=125 Identities=12% Similarity=0.024 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec-CCC---------------C-------CCCC----C----
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR-RPP---------------P-------GWFP----T---- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R-~~~---------------~-------~~~~----~---- 55 (176)
|.+|++|||||+|+||++++++|+ +.|++|++++| +.. . .... .
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 83 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLH-----QQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCED 83 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHH
Confidence 456899999999999999999999 79999999999 421 0 0001 0
Q ss_pred ------------Ccc----------------c-----------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCc------
Q 030483 56 ------------ALV----------------Q-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL------ 90 (176)
Q Consensus 56 ------------~~v----------------~-----------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v------ 90 (176)
+.+ . ++++..+++|+.++.++++++...+. .+.
T Consensus 84 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~~~~~~ 161 (276)
T 1mxh_A 84 IIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG--EGGAWRSRN 161 (276)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------CCC
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh--cCCCCCCCC
Confidence 001 1 23345789999999999999887521 123
Q ss_pred cEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEe
Q 030483 91 RHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIG 161 (176)
Q Consensus 91 ~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G 161 (176)
.+||++||...|.. . +....|... +.+.+ + ...|+++.+++|+.|.+
T Consensus 162 g~iv~isS~~~~~~---------------~---------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t 217 (276)
T 1mxh_A 162 LSVVNLCDAMTDLP---------------L---------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLL 217 (276)
T ss_dssp EEEEEECCGGGGSC---------------C---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSC
T ss_pred cEEEEECchhhcCC---------------C---------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccC
Confidence 68999998655420 0 011233322 22221 1 34589999999999998
Q ss_pred C
Q 030483 162 A 162 (176)
Q Consensus 162 ~ 162 (176)
+
T Consensus 218 ~ 218 (276)
T 1mxh_A 218 P 218 (276)
T ss_dssp C
T ss_pred C
Confidence 8
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=6.9e-12 Score=97.67 Aligned_cols=128 Identities=14% Similarity=-0.011 Sum_probs=81.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec-CCCCC---------------------CC-----------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR-RPPPG---------------------WF----------- 53 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R-~~~~~---------------------~~----------- 53 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++| +.... ..
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFA-----TEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSA 79 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 456899999999999999999999 68999999999 42110 00
Q ss_pred -----CCCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 54 -----PTALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 54 -----~~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
..+.+ .+++.+.+++|+.++.++++++...+.......+|+++||...+.
T Consensus 80 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--------- 150 (261)
T 1gee_A 80 IKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--------- 150 (261)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS---------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC---------
Confidence 00001 112345789999998888887665411011146899998854321
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHHH----HHHH----h-hCCCceEEEeccCceEeCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYELE----DVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
| . +....|...+ .+.+ + ...++++.++||++|+++.
T Consensus 151 --------~------~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 195 (261)
T 1gee_A 151 --------P------W-PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI 195 (261)
T ss_dssp --------C------C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGG
T ss_pred --------C------C-CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCch
Confidence 1 0 1112333222 2221 1 3458999999999999874
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.3e-11 Score=96.45 Aligned_cols=128 Identities=11% Similarity=0.034 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-C-----------CCC---------C----------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-G-----------WFP---------T---------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-~-----------~~~---------~---------- 55 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+... . ... +
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 76 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALA-----AQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDN 76 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHH
Confidence 346899999999999999999999 799999999987532 0 000 0
Q ss_pred --------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCc
Q 030483 56 --------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 56 --------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
+.+ .++++..+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 77 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~------- 148 (260)
T 1x1t_A 77 AVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMK-KQGFGRIINIASAHGLVA------- 148 (260)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSC-------
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCEEEEECcHHhCcC-------
Confidence 000 112345789999998888887754310 013478999998655420
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. + ....|... +.+.+ + ...++++.+++|++|.++..
T Consensus 149 --------~------~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 193 (260)
T 1x1t_A 149 --------S------A---NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLV 193 (260)
T ss_dssp --------C------T---TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---
T ss_pred --------C------C---CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchH
Confidence 0 0 11233322 22221 2 35689999999999998753
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.2e-11 Score=96.37 Aligned_cols=126 Identities=11% Similarity=-0.016 Sum_probs=82.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------------CCC-----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------------WFP----------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------------~~~----------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... ...
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFA-----KNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWG 100 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999 7999999999874310 000
Q ss_pred -CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCC
Q 030483 55 -TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 117 (176)
Q Consensus 55 -~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~ 117 (176)
.+.+ .++++..+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~------------- 166 (277)
T 4dqx_A 101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMR-RNGGGSIINTTSYTATSA------------- 166 (277)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHT-TTTCEEEEEECCGGGTSC-------------
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCcEEEEECchhhCcC-------------
Confidence 0001 113455788999999888888765421 113468999998655421
Q ss_pred CCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 118 YEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 118 ~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. +....|... +.+.+ + ...|+++.+++|+.|..+.
T Consensus 167 --------~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 210 (277)
T 4dqx_A 167 --------I---ADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPY 210 (277)
T ss_dssp --------C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred --------C---CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCch
Confidence 0 011233322 21211 2 3568999999999998763
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.23 E-value=4.1e-11 Score=92.15 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~ 48 (176)
|+++++|||||+|+||++++++|+ +.| ++|++++|+.
T Consensus 1 m~~k~vlItGasggiG~~la~~l~-----~~g~~~~V~~~~r~~ 39 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLV-----KDKNIRHIIATARDV 39 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHH-----TCTTCCEEEEEESSG
T ss_pred CCCCEEEEecCCchHHHHHHHHHH-----hcCCCcEEEEEecCH
Confidence 346899999999999999999999 688 9999999974
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.22 E-value=5.3e-11 Score=92.16 Aligned_cols=124 Identities=10% Similarity=-0.039 Sum_probs=81.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCC-------------------------CCcc----
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP-------------------------TALV---- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~-------------------------~~~v---- 58 (176)
.+|++|||||+|+||++++++|++ ..|+.|+.++|+....... .+.+
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~----~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA 78 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQ----NKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNA 78 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTT----STTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHh----cCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence 357899999999999999999993 3899999999876521100 0001
Q ss_pred ------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCC
Q 030483 59 ------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 126 (176)
Q Consensus 59 ------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~ 126 (176)
.+++...+++|+.++.++++++...+ .+-.+|+++||...+.. .
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~---~~~g~iv~~sS~~~~~~---------------------~ 134 (244)
T 4e4y_A 79 GILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL---KVGASIVFNGSDQCFIA---------------------K 134 (244)
T ss_dssp CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGE---EEEEEEEEECCGGGTCC---------------------C
T ss_pred ccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHh---ccCcEEEEECCHHHccC---------------------C
Confidence 11345678999999999999987652 11147899888654320 0
Q ss_pred CCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeC
Q 030483 127 SRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 127 ~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~ 162 (176)
+....|... +.+.+ | ...|+++.+++|+.|..+
T Consensus 135 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 176 (244)
T 4e4y_A 135 ---PNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTD 176 (244)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCH
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCch
Confidence 011223322 22211 2 356899999999999876
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.22 E-value=3.3e-11 Score=95.53 Aligned_cols=128 Identities=12% Similarity=0.089 Sum_probs=81.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-C--------C-------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-F--------P------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~--------~------------- 54 (176)
+++|++|||||+|+||++++++|+ +.|++|++++|+.... . . +
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 97 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLA-----KAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAM 97 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHH
Confidence 567899999999999999999999 7999999999843110 0 0 0
Q ss_pred -------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCc
Q 030483 55 -------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 55 -------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
.+.+ .+++...+++|+.++.++++++...+. ..+..+||++||...+..
T Consensus 98 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~------- 169 (281)
T 3v2h_A 98 VADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMK-KKGWGRIINIASAHGLVA------- 169 (281)
T ss_dssp HHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSC-------
T ss_pred HHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCCEEEEECCcccccC-------
Confidence 0000 112356789999999998888743210 013468999988654320
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. + ....|... +.+.+ + ...|+++.+++|+.|.++..
T Consensus 170 --------~------~---~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~ 214 (281)
T 3v2h_A 170 --------S------P---FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLV 214 (281)
T ss_dssp --------C------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---
T ss_pred --------C------C---CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcch
Confidence 0 0 11233322 21221 2 35689999999999998754
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.22 E-value=6.6e-11 Score=93.46 Aligned_cols=36 Identities=22% Similarity=0.108 Sum_probs=32.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la-----~~G~~V~~~~r~ 48 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLA-----AEGADIIACDIC 48 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEECC
T ss_pred cCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEecc
Confidence 356899999999999999999999 799999999984
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.22 E-value=8.7e-12 Score=98.36 Aligned_cols=36 Identities=36% Similarity=0.455 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~-----~~G~~V~~~~r~~ 66 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALV-----QQGLKVVGCARTV 66 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEECCh
Confidence 45889999999999999999999 7899999999863
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.6e-11 Score=95.13 Aligned_cols=127 Identities=13% Similarity=0.033 Sum_probs=79.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CC-----------------------CCCc
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WF-----------------------PTAL 57 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-----------------------~~~~ 57 (176)
.++++|||||+|+||++++++|+ +.|++|++++|+.... .. ..+.
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLH-----KLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDI 87 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 46899999999999999999999 7999999999874310 00 0011
Q ss_pred c----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcc
Q 030483 58 V----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 58 v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p 121 (176)
+ .+++...+++|+.++.++++++...+. ..+..+|+++||...|.. .
T Consensus 88 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~---------------~- 150 (249)
T 3f9i_A 88 LVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMI-QKRYGRIINISSIVGIAG---------------N- 150 (249)
T ss_dssp EEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCCCC--C---------------C-
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCcEEEEEccHHhccC---------------C-
Confidence 1 234567889999998888887754310 013468999998765421 0
Q ss_pred ccCCCCCCCCCcchHHHH----HHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 122 FKEDSSRLPFPNFYYELE----DVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 122 ~~E~~~~~~~~~~y~~~e----~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+....|...+ .+.+ + ...++++.+++|+.|.++..
T Consensus 151 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 194 (249)
T 3f9i_A 151 --------PGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMT 194 (249)
T ss_dssp --------SCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC----
T ss_pred --------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcc
Confidence 0112233221 1221 2 35689999999999987643
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.7e-11 Score=96.66 Aligned_cols=132 Identities=11% Similarity=0.004 Sum_probs=83.4
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CC---------C-----------
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WF---------P----------- 54 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~---------~----------- 54 (176)
|.....+.+|++|||||+|+||++++++|+ ++|++|++++|+.... .. .
T Consensus 1 M~~~~~l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 75 (270)
T 1yde_A 1 MATGTRYAGKVVVVTGGGRGIGAGIVRAFV-----NSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSE 75 (270)
T ss_dssp ---CCTTTTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCCCCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHH
Confidence 433344567899999999999999999999 7999999999874210 00 0
Q ss_pred -------CCcc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCC
Q 030483 55 -------TALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 110 (176)
Q Consensus 55 -------~~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~ 110 (176)
.+.+ .++++..+++|+.++.++++++...+. .+..+||++||...+.+
T Consensus 76 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~g~iv~isS~~~~~~------ 147 (270)
T 1yde_A 76 TIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLR--KSQGNVINISSLVGAIG------ 147 (270)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH--HHTCEEEEECCHHHHHC------
T ss_pred HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH--HCCCEEEEEcCccccCC------
Confidence 0000 012356789999999999888865310 01368999988643210
Q ss_pred ccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 111 LAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 111 ~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. + ....|... +.+.+ + ..+|+++.++||++|+++.
T Consensus 148 ---------~------~---~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~ 191 (270)
T 1yde_A 148 ---------Q------A---QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL 191 (270)
T ss_dssp ---------C------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred ---------C------C---CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccch
Confidence 0 0 11223322 22221 1 3568999999999999873
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.7e-11 Score=92.10 Aligned_cols=88 Identities=8% Similarity=-0.032 Sum_probs=58.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE-ecCCCCC----------CCC---------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPG----------WFP--------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~----------~~~--------------------- 54 (176)
+.+|++|||||+|+||++++++|+ ++|++|+++ .|+.... ...
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~-----~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLG-----NMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTA 77 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCcEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 456899999999999999999999 799999998 4543210 000
Q ss_pred ------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 55 ------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 55 ------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
.+.+ .+++.+.+++|+.++.++++++...+. ..+..+|+++||..
T Consensus 78 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~ 144 (247)
T 2hq1_A 78 MDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIML-KQKSGKIINITSIA 144 (247)
T ss_dssp HHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHH-HHTCEEEEEECC--
T ss_pred HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEcChh
Confidence 0000 112346789999998888877764310 01357899998863
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.4e-11 Score=96.53 Aligned_cols=129 Identities=12% Similarity=-0.000 Sum_probs=80.3
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C-C-------C-------------
Q 030483 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W-F-------P------------- 54 (176)
Q Consensus 5 ~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~-------~------------- 54 (176)
..+.++++|||||+|+||++++++|+ +.|++|++++|+.... . . +
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLG-----SLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATG 99 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred hccCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH
Confidence 33456899999999999999999999 7999999999974320 0 0 0
Q ss_pred -------CCcc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCC
Q 030483 55 -------TALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 110 (176)
Q Consensus 55 -------~~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~ 110 (176)
.+.+ .+++...+++|+.++.++++++...+. ..+..+||++||...+..
T Consensus 100 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~------ 172 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMI-AAKRGHIINISSLAGKNP------ 172 (262)
T ss_dssp HHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTTCCEEEEECSSCSSCC------
T ss_pred HHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCceEEEEechhhcCC------
Confidence 0000 112345789999999888888755310 013468999998654320
Q ss_pred ccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 111 LAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 111 ~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. +....|... +.+.+ + ...++++.+++|+.|..+-
T Consensus 173 ---------------~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~ 216 (262)
T 3rkr_A 173 ---------------V---ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEF 216 (262)
T ss_dssp ---------------C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred ---------------C---CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCc
Confidence 0 011223322 22221 2 3568999999999997654
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.3e-11 Score=97.59 Aligned_cols=126 Identities=13% Similarity=-0.009 Sum_probs=82.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C-C---C---------C----------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W-F---P---------T---------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~---~---------~---------- 55 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... . . . +
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 84 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLV-----AAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA 84 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence 46899999999999999999999 7999999999874210 0 0 0 0
Q ss_pred --------Ccc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCC
Q 030483 56 --------ALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 110 (176)
Q Consensus 56 --------~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~ 110 (176)
+.+ .+++...+++|+.++.++++++...+. ..+-.+||++||...+...
T Consensus 85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~~----- 158 (281)
T 3svt_A 85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMV-RGGGGSFVGISSIAASNTH----- 158 (281)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCEEEEEECCHHHHSCC-----
T ss_pred HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEeCHHHcCCC-----
Confidence 000 112356789999999999988776521 0122489999987654210
Q ss_pred ccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 111 LAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 111 ~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ ....|... +.+.+ + ...++++.+++|+.|.++.
T Consensus 159 ----------------~---~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 201 (281)
T 3svt_A 159 ----------------R---WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDL 201 (281)
T ss_dssp ----------------T---TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred ----------------C---CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence 0 11223322 22222 2 3567999999999998874
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=2.5e-11 Score=94.24 Aligned_cols=126 Identities=13% Similarity=-0.068 Sum_probs=82.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------------CCC------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------------WFP------------------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------------~~~------------------ 54 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.... ...
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFA-----KEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGR 77 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 456899999999999999999999 7999999999874210 000
Q ss_pred CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 55 TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 55 ~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
.+.+ .++++..+++|+.++.++.+++...+. ..+..+|+++||...++.
T Consensus 78 id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-~~~~g~iv~isS~~~~~~-------------- 142 (245)
T 1uls_A 78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMR-EKNPGSIVLTASRVYLGN-------------- 142 (245)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCCEEEEEECCGGGGCC--------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEEccchhcCC--------------
Confidence 0001 112345789999999998888766422 123578999988652220
Q ss_pred CccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeCC
Q 030483 119 EVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ ....|...+ .+. .+ ...|+++.+++|+.|..+.
T Consensus 143 --------~---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 185 (245)
T 1uls_A 143 --------L---GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM 185 (245)
T ss_dssp --------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred --------C---CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcc
Confidence 0 112232221 111 22 3568999999999997764
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=3.5e-11 Score=95.33 Aligned_cols=127 Identities=16% Similarity=0.088 Sum_probs=78.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CC---------C--------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WF---------P-------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~---------~-------------- 54 (176)
++|++|||||+|+||++++++|+ +.|++|++++|+.... .. .
T Consensus 43 ~~k~vlITGasggIG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 117 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLA-----KSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT 117 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHT-----TTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH
Confidence 46889999999999999999999 7899999988763210 00 0
Q ss_pred ----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 55 ----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 55 ----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
.+.+ .+++.+.+++|+.++.++++++...+. ..+..+|+++||...+.+
T Consensus 118 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~---------- 186 (285)
T 2c07_A 118 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMI-NNRYGRIINISSIVGLTG---------- 186 (285)
T ss_dssp HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHH-HHTCEEEEEECCTHHHHC----------
T ss_pred hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hCCCCEEEEECChhhccC----------
Confidence 0001 012345789999998777777654210 013578999998755421
Q ss_pred CCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. + ....|... +.+.+ + ...++++.++||+.+.++..
T Consensus 187 -----~------~---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 231 (285)
T 2c07_A 187 -----N------V---GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMT 231 (285)
T ss_dssp -----C------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---
T ss_pred -----C------C---CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCch
Confidence 0 0 11223222 22221 1 34689999999999988743
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.8e-11 Score=96.96 Aligned_cols=126 Identities=13% Similarity=-0.030 Sum_probs=82.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------------CCC-----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------------WFP----------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------------~~~----------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... ...
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLA-----DEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFG 102 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999 7999999999874210 000
Q ss_pred -CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCC
Q 030483 55 -TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 117 (176)
Q Consensus 55 -~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~ 117 (176)
.+.+ .++++..+++|+.++.++++++...+. ..+..+||++||...+.
T Consensus 103 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~Iv~isS~~~~~-------------- 167 (277)
T 3gvc_A 103 GVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMI-ERGGGAIVNLSSLAGQV-------------- 167 (277)
T ss_dssp SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCEEEEEECCGGGTS--------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEEcchhhcc--------------
Confidence 0000 113456789999999888888765311 01346799998864431
Q ss_pred CCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 118 YEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 118 ~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ . +....|... +.+.+ + ...|+++.+++|+.|.+|.
T Consensus 168 ---~----~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 212 (277)
T 3gvc_A 168 ---A----V---GGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM 212 (277)
T ss_dssp ---C----C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred ---C----C---CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch
Confidence 0 0 111233322 22221 2 3568999999999999874
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.21 E-value=8.2e-11 Score=92.93 Aligned_cols=127 Identities=8% Similarity=-0.026 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------CC----------C--------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WF----------P-------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~----------~-------------- 54 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|..... .. .
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 103 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYA-----RAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAA 103 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHh
Confidence 346899999999999999999999 7999999999764210 00 0
Q ss_pred ---CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 55 ---TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 55 ---~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
.+.+ .+++...+++|+.++.++++++...+. ..+..+||++||...+..
T Consensus 104 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~IV~isS~~~~~~----------- 171 (273)
T 3uf0_A 104 TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAML-AHGSGRIVTIASMLSFQG----------- 171 (273)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSC-----------
T ss_pred cCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEEcchHhcCC-----------
Confidence 0001 112456789999999888887744210 013468999998655421
Q ss_pred CCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. +....|... +.+.+ + ...|+++.+++|+.|..+.
T Consensus 172 ----~---------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 215 (273)
T 3uf0_A 172 ----G---------RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTAN 215 (273)
T ss_dssp ----C---------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred ----C---------CCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence 0 011233322 21221 2 3568999999999998864
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=8.4e-12 Score=97.31 Aligned_cols=88 Identities=18% Similarity=0.069 Sum_probs=63.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCC-CCcEEEEEecCCCC-------------CC------CCC------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPG-SPWKVYGAARRPPP-------------GW------FPT------------ 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~-~g~~V~~l~R~~~~-------------~~------~~~------------ 55 (176)
.++++|||||+|+||++++++|+ + .|++|++++|+... .. ..+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~-----~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 77 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLC-----RLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLR 77 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHH-----HHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHH
Confidence 35789999999999999999999 7 89999999987421 00 000
Q ss_pred ------Ccc------------c----CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeec
Q 030483 56 ------ALV------------Q----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 103 (176)
Q Consensus 56 ------~~v------------~----~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg 103 (176)
+.+ . ++++..+++|+.++.++++++...+ .+..+|+++||...|.
T Consensus 78 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~g~iv~~sS~~~~~ 144 (276)
T 1wma_A 78 KEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI---KPQGRVVNVSSIMSVR 144 (276)
T ss_dssp HHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGE---EEEEEEEEECCHHHHH
T ss_pred HhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhh---CCCCEEEEECChhhhc
Confidence 000 0 1224568999999999999998761 1235899999977663
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.20 E-value=9.5e-12 Score=96.84 Aligned_cols=133 Identities=17% Similarity=0.110 Sum_probs=84.9
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------------CCC----------
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------------WFP---------- 54 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------------~~~---------- 54 (176)
|..+-.+.+|++|||||+|+||++++++|+ ++|++|++++|+.... ...
T Consensus 1 M~~~~~l~gk~~lVTGas~gIG~a~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 75 (248)
T 3op4_A 1 MSQFMNLEGKVALVTGASRGIGKAIAELLA-----ERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLK 75 (248)
T ss_dssp -CCTTCCTTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHH
T ss_pred CccccCCCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHH
Confidence 554444567899999999999999999999 7999999999874320 000
Q ss_pred --------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCC
Q 030483 55 --------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 110 (176)
Q Consensus 55 --------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~ 110 (176)
.+.+ .++++..+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 76 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~-~~~~g~iv~isS~~~~~~------ 148 (248)
T 3op4_A 76 AITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMM-KKRQGRIINVGSVVGTMG------ 148 (248)
T ss_dssp HHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCHHHHHC------
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCCEEEEEcchhhcCC------
Confidence 0001 113456789999999988888765310 013468999988654320
Q ss_pred ccCCCCCCCccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeCC
Q 030483 111 LAGQLMPYEVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 111 ~~g~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. + ....|...+ .+. .| ...|+++.+++|+.|..+.
T Consensus 149 ---------~------~---~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 192 (248)
T 3op4_A 149 ---------N------A---GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 192 (248)
T ss_dssp ---------C------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTT
T ss_pred ---------C------C---CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCch
Confidence 0 0 112233222 121 12 3568999999999997664
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.4e-11 Score=96.77 Aligned_cols=126 Identities=13% Similarity=0.061 Sum_probs=80.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------------CCC------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------------WFP------------------T 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------------~~~------------------~ 55 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... ... .
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 100 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLL-----EHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSL 100 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHH-----HTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 35789999999999999999999 7999999999986431 000 0
Q ss_pred Ccc---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCc
Q 030483 56 ALV---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 120 (176)
Q Consensus 56 ~~v---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~ 120 (176)
+.+ .+++...+++|+.++.++++++...+. ..+..+||++||...+..
T Consensus 101 D~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~-~~~~g~iv~isS~~~~~~---------------- 163 (260)
T 3gem_A 101 RAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLT-ASEVADIVHISDDVTRKG---------------- 163 (260)
T ss_dssp SEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHH-TSSSCEEEEECCGGGGTC----------------
T ss_pred CEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCcEEEEECChhhcCC----------------
Confidence 111 112345789999999988888765421 113468999988654420
Q ss_pred cccCCCCCCCCCcchHHHH----HHHH----hhCCCceEEEeccCceEeCC
Q 030483 121 PFKEDSSRLPFPNFYYELE----DVSA----SYSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 121 p~~E~~~~~~~~~~y~~~e----~~~~----~~~~g~~~~ivRp~~v~G~~ 163 (176)
.+ ....|...+ .+.+ +...++++.+++|+.|..+.
T Consensus 164 -----~~---~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~ 206 (260)
T 3gem_A 164 -----SS---KHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQP 206 (260)
T ss_dssp -----CS---SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--
T ss_pred -----CC---CcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCC
Confidence 00 112333222 1211 22336999999999998764
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.20 E-value=1.8e-11 Score=94.28 Aligned_cols=125 Identities=17% Similarity=0.054 Sum_probs=79.9
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE-ecCCCCC---------------------CC-------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPG---------------------WF------------- 53 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~---------------------~~------------- 53 (176)
+|++|||||+|+||++++++|+ +.|++|+++ .|+.... ..
T Consensus 1 ~k~vlVTGasggiG~~la~~l~-----~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLG-----KAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAID 75 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 3789999999999999999999 799999985 6653110 00
Q ss_pred ---CCCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 54 ---PTALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 54 ---~~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
..+.+ .+++++.+++|+.++.++++++...+. ..+..+|+++||...+.+
T Consensus 76 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~---------- 144 (244)
T 1edo_A 76 AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMM-KKRKGRIINIASVVGLIG---------- 144 (244)
T ss_dssp HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCTHHHHC----------
T ss_pred HcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH-hcCCCEEEEECChhhcCC----------
Confidence 00101 012345789999999988888765310 013578999998654320
Q ss_pred CCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. + ....|... +.+.+ + ...++++.++||++++++.
T Consensus 145 -----~------~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (244)
T 1edo_A 145 -----N------I---GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM 188 (244)
T ss_dssp -----C------T---TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred -----C------C---CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccch
Confidence 0 0 11223222 21221 1 3568999999999998874
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.20 E-value=4.1e-11 Score=94.41 Aligned_cols=127 Identities=15% Similarity=0.144 Sum_probs=80.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------------------C----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------------------W---------------- 52 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------------~---------------- 52 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... .
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELA-----GLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH 94 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCcchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 7999999999874210 0
Q ss_pred ---CCCCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 53 ---FPTALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 53 ---~~~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
...+.+ .+++...+++|+.++.++++++...+. ..+..+||++||...|..
T Consensus 95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~-~~~~g~iv~isS~~~~~~--------- 164 (273)
T 1ae1_A 95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLK-ASQNGNVIFLSSIAGFSA--------- 164 (273)
T ss_dssp HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTSEEEEEECCGGGTSC---------
T ss_pred HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEcCHhhcCC---------
Confidence 000001 112345688999999988888753210 013478999998765431
Q ss_pred CCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. +....|... +.+.+ + ...++++.+++|+.|+++..
T Consensus 165 ------~---------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 209 (273)
T 1ae1_A 165 ------L---------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLV 209 (273)
T ss_dssp ------C---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----
T ss_pred ------C---------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchh
Confidence 0 011233322 22221 2 35689999999999998854
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.20 E-value=2.1e-11 Score=96.34 Aligned_cols=127 Identities=8% Similarity=-0.040 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CC---C-------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WF---P------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~---~------------------- 54 (176)
+++|++|||||+|+||++++++|+ +.|++|++++|+.... .. .
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 78 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFA-----QEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIIN 78 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHH
Confidence 567899999999999999999999 7999999999874210 00 0
Q ss_pred --------CCcc--------c------------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccc
Q 030483 55 --------TALV--------Q------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPI 106 (176)
Q Consensus 55 --------~~~v--------~------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~ 106 (176)
.+.+ . +++...+++|+.++.++++++...+. ..+ .+||++||...+..
T Consensus 79 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~-g~iv~isS~~~~~~-- 154 (280)
T 1xkq_A 79 STLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLV-ASK-GEIVNVSSIVAGPQ-- 154 (280)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHT-CEEEEECCGGGSSS--
T ss_pred HHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhh-cCC-CcEEEecCccccCC--
Confidence 0000 1 01345688999999998888776410 012 68999998655420
Q ss_pred cCCCccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 107 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 107 ~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. .+ ....|... +.+.+ + ...|+++.+++|++|.++.
T Consensus 155 -------------~-----~~---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (280)
T 1xkq_A 155 -------------A-----QP---DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF 199 (280)
T ss_dssp -------------C-----CC---SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred -------------C-----CC---cccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCc
Confidence 0 01 11233322 22221 1 3678999999999999874
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.4e-11 Score=96.35 Aligned_cols=127 Identities=15% Similarity=0.057 Sum_probs=84.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------------CCCC--------------
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------------WFPT-------------- 55 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------------~~~~-------------- 55 (176)
.+.+|++|||||+|+||++++++|+ ++|++|++++|+.... ...+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLV-----EGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 3557899999999999999999999 7999999999974320 0000
Q ss_pred ----Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 56 ----ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 56 ----~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
+.+ .++++..+++|+.++.++++++...+ .+-.+|+++||...+..
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~---~~~g~iv~isS~~~~~~----------- 145 (255)
T 4eso_A 80 LGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLI---REGGSIVFTSSVADEGG----------- 145 (255)
T ss_dssp HSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE---EEEEEEEEECCGGGSSB-----------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH---hcCCEEEEECChhhcCC-----------
Confidence 000 11245678999999999999988752 12357999988655421
Q ss_pred CCCCccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. +....|...+ .+. .| ...|+++..++|+.|..+..
T Consensus 146 ----~---------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~ 190 (255)
T 4eso_A 146 ----H---------PGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTK 190 (255)
T ss_dssp ----C---------TTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSST
T ss_pred ----C---------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccc
Confidence 0 0112333222 111 12 34589999999999988753
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.5e-11 Score=94.22 Aligned_cols=128 Identities=12% Similarity=-0.018 Sum_probs=71.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CC---------C--------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WF---------P-------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~---------~-------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... .. .
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALA-----REGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA 82 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 7999999999874310 00 0
Q ss_pred ----CCcc-------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCc
Q 030483 55 ----TALV-------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 55 ----~~~v-------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
.+.+ .+++...+++|+.++.++.+++...+. ..+..+|+++||...|..
T Consensus 83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~------- 154 (253)
T 3qiv_A 83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMT-KRGGGAIVNQSSTAAWLY------- 154 (253)
T ss_dssp HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTCEEEEEECC-------------
T ss_pred HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-hcCCCEEEEECCccccCC-------
Confidence 0000 012345789999996665555443210 003468999998765521
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
.. .+...+...+.+.+ + ...++++.+++|+.|+++..
T Consensus 155 -------~~---------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 196 (253)
T 3qiv_A 155 -------SN---------YYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEAN 196 (253)
T ss_dssp ---------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------
T ss_pred -------Cc---------hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccch
Confidence 00 11222333333332 2 35689999999999998854
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=2e-10 Score=88.74 Aligned_cols=87 Identities=9% Similarity=-0.005 Sum_probs=62.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-----------------------------CCCcc
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-----------------------------PTALV 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-----------------------------~~~~v 58 (176)
++|++|||||+|+||++++++|+ ++|++|++++|+...... ..+.+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l 80 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFR-----ARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI 80 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHH-----TTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----hCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 35789999999999999999999 799999999998643110 00001
Q ss_pred -----------c-C-----cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 59 -----------Q-E-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 59 -----------~-~-----~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
. . +++..+++|+.++.++++++...+. +-.+|+++||...+
T Consensus 81 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~ 138 (241)
T 1dhr_A 81 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLK---EGGLLTLAGAKAAL 138 (241)
T ss_dssp EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEECCGGGG
T ss_pred EEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhc---cCCEEEEECCHHHc
Confidence 0 1 1245688999999999999877521 12589999886554
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.19 E-value=1.3e-11 Score=96.89 Aligned_cols=128 Identities=10% Similarity=-0.097 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C-CC---------C---------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W-FP---------T--------------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~---------~--------------- 55 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.... . .. +
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFA-----REGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEF 78 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 556899999999999999999999 7999999999974210 0 00 0
Q ss_pred ---Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCC
Q 030483 56 ---ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 116 (176)
Q Consensus 56 ---~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~ 116 (176)
+.+ .++++..+++|+.++.++++++...+ . +..+|+++||...|+.+.
T Consensus 79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~-~~g~iv~isS~~~~~~~~---------- 145 (263)
T 2a4k_A 79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL--E-EGGSLVLTGSVAGLGAFG---------- 145 (263)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC--C-TTCEEEEECCCTTCCHHH----------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH--h-cCCEEEEEecchhcCCCC----------
Confidence 001 01234578899999999999988763 1 136899999876552110
Q ss_pred CCCccccCCCCCCCCCcchHHH----HHHHHh-hCCCceEEEeccCceEeCC
Q 030483 117 PYEVPFKEDSSRLPFPNFYYEL----EDVSAS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 117 ~~~~p~~E~~~~~~~~~~y~~~----e~~~~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
...|. ..+... +.+..+ ...|+++.++||+.|.++.
T Consensus 146 --~~~Y~---------asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 186 (263)
T 2a4k_A 146 --LAHYA---------AGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM 186 (263)
T ss_dssp --HHHHH---------HCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred --cHHHH---------HHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCch
Confidence 00010 001111 222223 4578999999999998875
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=8.6e-11 Score=92.18 Aligned_cols=131 Identities=11% Similarity=0.031 Sum_probs=84.5
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-C--------C--C----
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-F--------P--T---- 55 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~--------~--~---- 55 (176)
|.+++ +.+|++|||||+|+||++++++|+ +.|++|++++|+.... . . + +
T Consensus 1 M~~~~-l~~k~~lVTGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v 74 (265)
T 3lf2_A 1 MKPYD-LSEAVAVVTGGSSGIGLATVELLL-----EAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQV 74 (265)
T ss_dssp --CCC-CTTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHH
T ss_pred CCccC-cCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHH
Confidence 55544 567899999999999999999999 7999999999874210 0 0 0 0
Q ss_pred --------------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeeccc
Q 030483 56 --------------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGP 105 (176)
Q Consensus 56 --------------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~ 105 (176)
+.+ .+++...+++|+.++.++++++...+. ..+-.+|+++||...+.
T Consensus 75 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~-- 151 (265)
T 3lf2_A 75 RAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLE-SRADAAIVCVNSLLASQ-- 151 (265)
T ss_dssp HHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSTTEEEEEEEEGGGTS--
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCCeEEEEECCcccCC--
Confidence 000 113456789999999999998866421 11346799998865431
Q ss_pred ccCCCccCCCCCCCccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeC
Q 030483 106 IFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 106 ~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~ 162 (176)
+ . +....|...+ .+. .| ...|+++..++|+.|..+
T Consensus 152 ---------------~----~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 195 (265)
T 3lf2_A 152 ---------------P----E---PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESG 195 (265)
T ss_dssp ---------------C----C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred ---------------C----C---CCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCc
Confidence 0 0 1112333221 111 12 356899999999999875
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=4.8e-11 Score=93.00 Aligned_cols=126 Identities=11% Similarity=0.044 Sum_probs=81.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------------CCC--------------CCcc
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------------WFP--------------TALV 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------------~~~--------------~~~v 58 (176)
|++|||||+|+||++++++|+ ++|++|++++|+.... ... .+.+
T Consensus 2 k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~l 76 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLS-----EAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVL 76 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHH-----HTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEE
T ss_pred eEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEE
Confidence 589999999999999999999 7999999999874320 000 0111
Q ss_pred ------c-----------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcc
Q 030483 59 ------Q-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 59 ------~-----------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p 121 (176)
. ++++..+++|+.++.++++++...+. ..+..+|+++||...+. +
T Consensus 77 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~-----------------~ 138 (254)
T 1zmt_A 77 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMK-KRKSGHIIFITSATPFG-----------------P 138 (254)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCCEEEEECCSTTTS-----------------C
T ss_pred EECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEECCccccc-----------------C
Confidence 1 12345789999999888888754310 01246899998865432 0
Q ss_pred ccCCCCCCCCCcchHHH----HHHH----Hh-hCCCceEEEeccCceEeCCCC
Q 030483 122 FKEDSSRLPFPNFYYEL----EDVS----AS-YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 122 ~~E~~~~~~~~~~y~~~----e~~~----~~-~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.+ ....|... +.+. .+ ...++++.+++|+.|+||...
T Consensus 139 ----~~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~ 184 (254)
T 1zmt_A 139 ----WK---ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSP 184 (254)
T ss_dssp ----CT---TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCC
T ss_pred ----CC---CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccc
Confidence 00 11233322 1111 12 356899999999999888653
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=5e-11 Score=94.32 Aligned_cols=124 Identities=17% Similarity=0.012 Sum_probs=82.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------CCC----------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------WFP---------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~---------------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... ...
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 102 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELG-----RRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV 102 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 7999999998875210 000
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .++++..+++|+.++.++++++...+ .+..+|+++||...+..
T Consensus 103 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~g~iv~isS~~~~~~--------- 170 (283)
T 1g0o_A 103 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL---EIGGRLILMGSITGQAK--------- 170 (283)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS---CTTCEEEEECCGGGTCS---------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH---hcCCeEEEEechhhccC---------
Confidence 0000 11235578999999999999988763 13468999988644310
Q ss_pred CCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~ 162 (176)
. + +....|... +.+.+ | ...|+++.+++|+.|.++
T Consensus 171 ------~------~--~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 214 (283)
T 1g0o_A 171 ------A------V--PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD 214 (283)
T ss_dssp ------S------C--SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred ------C------C--CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccch
Confidence 0 0 001223322 22221 2 356899999999999876
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.19 E-value=1.8e-11 Score=96.04 Aligned_cols=128 Identities=14% Similarity=-0.025 Sum_probs=82.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C--CC---------C-----------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W--FP---------T----------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~--~~---------~----------- 55 (176)
+.+|++|||||+|+||++++++|+ ++|++|++++|+.... . .. +
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFA-----RAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRA 82 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 356899999999999999999999 7999999999874210 0 00 0
Q ss_pred -------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 56 -------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 56 -------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
+.+ .++++..+++|+.++.++++++...+. ..+..+||++||...+.
T Consensus 83 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~-~~~~g~iv~isS~~~~~--------- 152 (262)
T 3pk0_A 83 VEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALI-ASGSGRVVLTSSITGPI--------- 152 (262)
T ss_dssp HHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHSSCEEEEECCSBTTT---------
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEechhhcc---------
Confidence 000 112355789999999888887765421 01346899998854310
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
.+ . +....|... +.+.+ + ...|+++.+++|+.|.++.
T Consensus 153 -------~~----~---~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 198 (262)
T 3pk0_A 153 -------TG----Y---PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEG 198 (262)
T ss_dssp -------BC----C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred -------CC----C---CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcc
Confidence 00 0 111233322 22222 1 3468999999999998874
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.19 E-value=5.2e-11 Score=94.17 Aligned_cols=127 Identities=14% Similarity=0.057 Sum_probs=80.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC------------C---CC-C-----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP------------G---WF-P----------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~------------~---~~-~----------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+... . .. +
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLL-----EAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGEL 102 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHh
Confidence 46899999999999999999999 799999999986421 0 00 0
Q ss_pred ---CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcC---CCCCCccEEEEeccceeecccccCCCcc
Q 030483 55 ---TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSN---SGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 55 ---~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~---~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
.+.+ .++++..+++|+.++.++++++...+ +...+..+||++||...|..
T Consensus 103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~-------- 174 (276)
T 2b4q_A 103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISA-------- 174 (276)
T ss_dssp CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCC--------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCC--------
Confidence 0001 11245678999999877777765421 00112378999998755421
Q ss_pred CCCCCCCccccCCCCCCCCCc-chHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPN-FYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~-~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
.| ... .|... +.+.+ + ...++++.+++|+.+..+.
T Consensus 175 -------~~---------~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 219 (276)
T 2b4q_A 175 -------MG---------EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRM 219 (276)
T ss_dssp -------CC---------CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTT
T ss_pred -------CC---------CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcc
Confidence 00 011 33322 22222 2 3568999999999998764
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.18 E-value=5.9e-10 Score=88.36 Aligned_cols=90 Identities=12% Similarity=-0.009 Sum_probs=65.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC------------------------C--C-----
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF------------------------P--T----- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~------------------------~--~----- 55 (176)
+.+|++|||||+|+||++++++|+ ++|++|++++|+...... + +
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 81 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVA-----ADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVA 81 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHH-----TTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 457899999999999999999999 799999999998652100 0 0
Q ss_pred -------------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 56 -------------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 56 -------------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
+.+ .+++...+++|+.++.++++++...+. ..+..+|+++||...+
T Consensus 82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~iv~isS~~~~ 156 (285)
T 3sc4_A 82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMK-GRDNPHILTLSPPIRL 156 (285)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTT-TSSSCEEEECCCCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEECChhhc
Confidence 000 112355788999999999999887642 1134689999886543
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.2e-10 Score=92.74 Aligned_cols=124 Identities=14% Similarity=-0.010 Sum_probs=83.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC---------------C---CC-C--C-----------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP---------------G---WF-P--T----------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~---------------~---~~-~--~----------- 55 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+... . .. + +
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYA-----REGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKA 122 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 46899999999999999999999 799999998876220 0 00 0 0
Q ss_pred -------Ccc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCc
Q 030483 56 -------ALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 56 -------~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
+.+ .+++...+++|+.++.++++++...+. +-.+||++||...|...
T Consensus 123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~---~~g~Iv~isS~~~~~~~------ 193 (294)
T 3r3s_A 123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLP---KGASIITTSSIQAYQPS------ 193 (294)
T ss_dssp HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCC---TTCEEEEECCGGGTSCC------
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhh---cCCEEEEECChhhccCC------
Confidence 000 112356789999999999999987631 22589999987655310
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHH----HHHH----Hh-hCCCceEEEeccCceEeCC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVS----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+....|... +.+. .| ...|+++.+++|+.|.++.
T Consensus 194 ------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 236 (294)
T 3r3s_A 194 ------------------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_dssp ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred ------------------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccc
Confidence 011223322 2222 12 3568999999999999864
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.18 E-value=8.9e-11 Score=92.47 Aligned_cols=132 Identities=13% Similarity=0.007 Sum_probs=83.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC----------------------CC----------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----------------------FP---------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----------------------~~---------- 54 (176)
+.+|++|||||+|+||++++++|+ ++|++|++++|+..... ..
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 85 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLA-----ADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD 85 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 457899999999999999999999 79999999998732000 00
Q ss_pred -----------------CCcc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeeccc
Q 030483 55 -----------------TALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGP 105 (176)
Q Consensus 55 -----------------~~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~ 105 (176)
.+.+ .+++...+++|+.++.++++++...+.....-.+||++||...+.+
T Consensus 86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~- 164 (278)
T 3sx2_A 86 RESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAG- 164 (278)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC-
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCC-
Confidence 0000 1234567899999999988887654100011358999988655421
Q ss_pred ccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHH-----HH----h-hCCCceEEEeccCceEeCCC
Q 030483 106 IFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV-----SA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 106 ~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~-----~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
..... +....|...|. .+ + ...++++..++|+.|.++..
T Consensus 165 ----------------~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~ 213 (278)
T 3sx2_A 165 ----------------VGSAD----PGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMI 213 (278)
T ss_dssp ----------------CCCSS----HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTT
T ss_pred ----------------CccCC----CCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccc
Confidence 00000 11222333222 11 2 35689999999999988753
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.18 E-value=2.8e-11 Score=93.48 Aligned_cols=126 Identities=16% Similarity=0.011 Sum_probs=80.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------------CCC--------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------------WFP-------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------------~~~-------------- 54 (176)
|++|++|||||+|+||++++++|+ +.|++|++++|+.... ...
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 75 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLV-----ERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWG 75 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 346899999999999999999999 7999999999975320 000
Q ss_pred --CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCC
Q 030483 55 --TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 116 (176)
Q Consensus 55 --~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~ 116 (176)
.+.+ .++++..+++|+.++.++++++...+... + .+|+++||...+.+
T Consensus 76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~-~~iv~isS~~~~~~------------ 141 (235)
T 3l6e_A 76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER-G-GVLANVLSSAAQVG------------ 141 (235)
T ss_dssp CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-C-EEEEEECCEECCSS------------
T ss_pred CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-C-CEEEEEeCHHhcCC------------
Confidence 0111 11345678999999988888886542111 2 38999988654320
Q ss_pred CCCccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeCC
Q 030483 117 PYEVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 117 ~~~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. +....|...+ .+. .| ...|+++..++|+.|-.+-
T Consensus 142 ---~---------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 185 (235)
T 3l6e_A 142 ---K---------ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEF 185 (235)
T ss_dssp ---C---------SSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC
T ss_pred ---C---------CCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcc
Confidence 0 0112233222 111 12 3568999999999886553
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=7.3e-11 Score=91.92 Aligned_cols=128 Identities=13% Similarity=0.002 Sum_probs=82.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-------C---------C-----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F---------P----------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------~---------~----------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+..... . .
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLV-----GQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFG 85 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 46899999999999999999999 79999999999764210 0 0
Q ss_pred -CCcc--------c-----------Cc---HHHHHHHHHHHHHHHHHHHHhcCCCC-----CCccEEEEeccceeecccc
Q 030483 55 -TALV--------Q-----------ES---EEVNIFKNSTMLKNVLSVLVSSNSGR-----SRLRHVALLTGTKHYMGPI 106 (176)
Q Consensus 55 -~~~v--------~-----------~~---~~~~~~~N~~~t~~ll~a~~~~~~~~-----~~v~~vv~~Ss~~~yg~~~ 106 (176)
.+.+ . .+ +...+++|+.++.++++++...+... .+..+|+++||...+..
T Consensus 86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-- 163 (265)
T 2o23_A 86 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG-- 163 (265)
T ss_dssp CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC--
T ss_pred CCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC--
Confidence 0000 0 11 34568899999999999887652101 03578999988655421
Q ss_pred cCCCccCCCCCCCccccCCCCCCCCCcchHHHH----HHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 107 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELE----DVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 107 ~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. + ....|...+ .+.+ + ...++++.+++|++|.++..
T Consensus 164 -------------~------~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 208 (265)
T 2o23_A 164 -------------Q------V---GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL 208 (265)
T ss_dssp -------------C------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--
T ss_pred -------------C------C---CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccc
Confidence 0 0 112233221 1221 1 34689999999999987743
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.17 E-value=2.6e-11 Score=94.74 Aligned_cols=129 Identities=14% Similarity=0.053 Sum_probs=81.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------C----C---------C-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------W----F---------P------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~----~---------~------------- 54 (176)
++|++|||||+|+||++++++|+ +.|++|++++|+.... . . .
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 80 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLL-----AKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAM 80 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred ccCEEEEeCCCchhHHHHHHHHH-----HCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 35789999999999999999999 7999999997764210 0 0 0
Q ss_pred -----CCcc------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCc
Q 030483 55 -----TALV------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 55 -----~~~v------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
.+.+ .+++.+.+++|+.++.++++++...+. ..+..+|+++||...++.
T Consensus 81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~g~iv~iss~~~~~~------- 152 (264)
T 3i4f_A 81 SHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMR-KQNFGRIINYGFQGADSA------- 152 (264)
T ss_dssp HHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCTTGGGC-------
T ss_pred HHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHH-hcCCCeEEEEeechhccc-------
Confidence 0000 112345789999999999988743210 013468999887644320
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+ . +....|... +.+.+ + ...++++.+++|+.|+++..
T Consensus 153 --------~~------~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 199 (264)
T 3i4f_A 153 --------PG------W-IYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMK 199 (264)
T ss_dssp --------CC------C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGG
T ss_pred --------CC------C-CCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccc
Confidence 00 0 111233322 22221 2 34689999999999998754
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.3e-10 Score=88.76 Aligned_cols=88 Identities=15% Similarity=-0.035 Sum_probs=63.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC-CCCC------------CCCcc---------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PGWF------------PTALV--------------- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~-~~~~------------~~~~v--------------- 58 (176)
+.+|++|||||+|+||++++++|+ ++|++|++++|+.. +... ..+.+
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~ 78 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLE-----SEHTIVHVASRQTGLDISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVD 78 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHC-----STTEEEEEESGGGTCCTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEecCCcccCCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCccc
Confidence 346889999999999999999999 79999999999753 2110 00111
Q ss_pred --cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 59 --QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 59 --~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
.+++...+++|+.++.++++++...+ .+-.+|+++||...+
T Consensus 79 ~~~~~~~~~~~~N~~g~~~~~~~~~~~~---~~~g~iv~~sS~~~~ 121 (223)
T 3uce_A 79 VEVTQAKYAFDTKFWGAVLAAKHGARYL---KQGGSITLTSGMLSR 121 (223)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHGGGE---EEEEEEEEECCGGGT
T ss_pred CCHHHHHhhheeeeeeHHHHHHHHHhhc---cCCeEEEEecchhhc
Confidence 12345678999999999999988762 122479999886543
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=4.2e-11 Score=93.70 Aligned_cols=130 Identities=15% Similarity=-0.008 Sum_probs=84.3
Q ss_pred CCcCCCCCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC------------CC-----C-CC-----
Q 030483 1 MEKQDQNPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPP------------GW-----F-PT----- 55 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~------------~~-----~-~~----- 55 (176)
|..++ +.+|++|||||+ |+||++++++|+ +.|++|++++|+... .. . .+
T Consensus 1 M~~~~-l~~k~vlVTGas~~~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~ 74 (261)
T 2wyu_A 1 MLTVD-LSGKKALVMGVTNQRSLGFAIAAKLK-----EAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELD 74 (261)
T ss_dssp CEEEC-CTTCEEEEESCCSSSSHHHHHHHHHH-----HHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHH
T ss_pred CCccC-CCCCEEEEECCCCCCcHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHH
Confidence 43333 557899999999 999999999999 789999999987520 00 0 00
Q ss_pred -------------Ccc-------c-------------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 56 -------------ALV-------Q-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 56 -------------~~v-------~-------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
+.+ . ++++..+++|+.++.++++++...+. +-.+|+++||...+
T Consensus 75 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~ 151 (261)
T 2wyu_A 75 ALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLR---EGGGIVTLTYYASE 151 (261)
T ss_dssp HHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE---EEEEEEEEECGGGT
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhc---cCCEEEEEeccccc
Confidence 000 1 01245689999999999999877521 12589999885443
Q ss_pred cccccCCCccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 103 MGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 103 g~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. +. + ....|... +.+.+ + ...++++.++||++|+++.
T Consensus 152 ~-----------------~~----~---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 197 (261)
T 2wyu_A 152 K-----------------VV----P---KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197 (261)
T ss_dssp S-----------------BC----T---TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTG
T ss_pred C-----------------CC----C---CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCch
Confidence 1 10 0 11223322 22221 1 3458999999999999875
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=1.8e-11 Score=96.49 Aligned_cols=126 Identities=13% Similarity=0.022 Sum_probs=81.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-CC---------C------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-FP---------T------------ 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~---------~------------ 55 (176)
.+|++|||||+|+||++++++|+ +.|++|+.++|+.... . .. +
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~ 101 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELA-----AAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVI 101 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 7999999988843210 0 00 0
Q ss_pred ------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 56 ------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 56 ------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
+.+ .++++..+++|+.++.++++++...+. ..+..+||++||...+.+
T Consensus 102 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~--------- 171 (269)
T 4dmm_A 102 ERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIML-KQRSGRIINIASVVGEMG--------- 171 (269)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCCEEEEECCHHHHHC---------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEECchhhcCC---------
Confidence 000 123456789999999888888754310 012358999998654421
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. + ....|...+ .+. .+ ...|+++.+++|+.|..+.
T Consensus 172 ------~------~---~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 215 (269)
T 4dmm_A 172 ------N------P---GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDM 215 (269)
T ss_dssp ------C------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSC
T ss_pred ------C------C---CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcc
Confidence 0 0 112232221 122 12 3568999999999998764
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.16 E-value=9.3e-11 Score=92.24 Aligned_cols=38 Identities=26% Similarity=0.166 Sum_probs=34.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+.+|++|||||+|+||++++++|+ ++|++|++++|+..
T Consensus 32 l~~k~vlITGasggIG~~la~~L~-----~~G~~V~~~~r~~~ 69 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYA-----QAGADVAIWYNSHP 69 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHH-----HHTCEEEEEESSSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 456899999999999999999999 68999999999764
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.16 E-value=4.5e-11 Score=94.33 Aligned_cols=127 Identities=10% Similarity=-0.033 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------CCC---------C-----------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------WFP---------T----------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~---------~----------- 55 (176)
+.+|++|||||+|+||++++++|+ +.|++|+.++|+.... ... +
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la-----~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLA-----LEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 346899999999999999999999 7999999987654210 000 0
Q ss_pred -------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 56 -------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 56 -------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
+.+ .+++++.+++|+.++.++++++...+. +-.+|+++||.....
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~---~~g~iv~isS~~~~~--------- 171 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLG---DGGRIITIGSNLAEL--------- 171 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC---TTCEEEEECCGGGTC---------
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh---cCCEEEEEeChhhcc---------
Confidence 000 113456789999999999999887632 236889888743211
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+ . +....|...+ .+. .+ ...|+++.+++|+.|..+..
T Consensus 172 -------~~------~-~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~ 218 (271)
T 3v2g_A 172 -------VP------W-PGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMN 218 (271)
T ss_dssp -------CC------S-TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSS
T ss_pred -------CC------C-CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcc
Confidence 00 0 1112333222 121 12 35689999999999988754
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=8e-11 Score=92.30 Aligned_cols=130 Identities=15% Similarity=0.095 Sum_probs=79.9
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-CC---------C---------
Q 030483 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-FP---------T--------- 55 (176)
Q Consensus 5 ~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~---------~--------- 55 (176)
+.+++|++|||||+|+||++++++|+ +.|++|+.+.++.... . .. +
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~-----~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~ 96 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLA-----ADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLE 96 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 33467899999999999999999999 7999997766543210 0 00 0
Q ss_pred ---------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCC
Q 030483 56 ---------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 110 (176)
Q Consensus 56 ---------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~ 110 (176)
+.+ .+++...+++|+.++.++++++...+....+..+|+++||...+..
T Consensus 97 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~------ 170 (267)
T 4iiu_A 97 HEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMG------ 170 (267)
T ss_dssp HHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHC------
T ss_pred HHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccC------
Confidence 000 1133567899999999988886421000013468999988655421
Q ss_pred ccCCCCCCCccccCCCCCCCCCcchHHHHHH-----H----Hh-hCCCceEEEeccCceEeCCC
Q 030483 111 LAGQLMPYEVPFKEDSSRLPFPNFYYELEDV-----S----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 111 ~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~-----~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. + ....| ...|. . .+ ...++++.+++|+.|..+..
T Consensus 171 ---------~------~---~~~~Y-~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 215 (267)
T 4iiu_A 171 ---------N------R---GQVNY-SAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMI 215 (267)
T ss_dssp ---------C------T---TCHHH-HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTC
T ss_pred ---------C------C---CCchh-HHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcc
Confidence 0 0 11223 32222 1 22 35689999999999987653
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=1.5e-10 Score=89.94 Aligned_cols=128 Identities=14% Similarity=0.060 Sum_probs=84.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecCCCC-------------C------CCCCC----------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPP-------------G------WFPTA---------- 56 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~-------------~------~~~~~---------- 56 (176)
+.+|++|||||+|+||++++++|+ ++|++ |++++|+... . ...++
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~-----~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELV-----KRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKK 77 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHH-----HCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHH
Confidence 456899999999999999999999 79997 9999987521 0 00011
Q ss_pred ---------cc--------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCC--CccEEEEeccceeecccccCCCccCCCCC
Q 030483 57 ---------LV--------QESEEVNIFKNSTMLKNVLSVLVSSNSGRS--RLRHVALLTGTKHYMGPIFDPSLAGQLMP 117 (176)
Q Consensus 57 ---------~v--------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~--~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~ 117 (176)
.+ .++++..+++|+.++.++++++...+.... ...+|+++||...|..
T Consensus 78 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------- 144 (254)
T 1sby_A 78 IFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA------------- 144 (254)
T ss_dssp HHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-------------
T ss_pred HHHhcCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC-------------
Confidence 01 335677899999999999998876421000 1357999998755421
Q ss_pred CCccccCCCCCCCCCcchHHH----HHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 118 YEVPFKEDSSRLPFPNFYYEL----EDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 118 ~~~p~~E~~~~~~~~~~y~~~----e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
. +....|... +.+.+. ...++++.+++|+.|.++.
T Consensus 145 --~---------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~ 188 (254)
T 1sby_A 145 --I---------HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL 188 (254)
T ss_dssp --C---------TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred --C---------CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcc
Confidence 0 011223322 222221 2368999999999999874
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.16 E-value=2.7e-11 Score=94.47 Aligned_cols=125 Identities=14% Similarity=0.002 Sum_probs=79.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CC---------C--------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WF---------P-------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~---------~-------------- 54 (176)
|+|++|||||+|+||++++++|+ +.|++|++++|+.... .. .
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 75 (256)
T 1geg_A 1 MKKVALVTGAGQGIGKAIALRLV-----KDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARK 75 (256)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999 7999999999874210 00 0
Q ss_pred ----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCC-ccEEEEeccceeecccccCCCccC
Q 030483 55 ----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 ----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~-v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .++++..+++|+.++.++++++...+. ..+ ..+|+++||...+.
T Consensus 76 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~~g~iv~isS~~~~~---------- 144 (256)
T 1geg_A 76 TLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFK-KEGHGGKIINACSQAGHV---------- 144 (256)
T ss_dssp HTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTSCEEEEEECCGGGTS----------
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCCEEEEECchhhcC----------
Confidence 0001 112345789999998887777665311 002 46899998864431
Q ss_pred CCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~ 162 (176)
.. +....|... +.+.+ + ...++++.++||+.|.++
T Consensus 145 -----~~---------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 188 (256)
T 1geg_A 145 -----GN---------PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP 188 (256)
T ss_dssp -----CC---------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred -----CC---------CCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccc
Confidence 00 011223322 22221 2 356899999999999876
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.16 E-value=4.9e-11 Score=93.85 Aligned_cols=90 Identities=10% Similarity=-0.054 Sum_probs=61.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CCC----------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFP---------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~---------------------- 54 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.... ...
T Consensus 29 l~~k~vlITGasggIG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFA-----KLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHH
Confidence 356899999999999999999999 7899999999874210 000
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
.+.+ .+++...+++|+.++.++++++...+. ..+..+|+++||...|
T Consensus 104 ~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~iv~isS~~~~ 171 (272)
T 1yb1_A 104 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMT-KNNHGHIVTVASAAGH 171 (272)
T ss_dssp HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTTCEEEEEECCCC-C
T ss_pred HHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEEechhhc
Confidence 0001 012345788999998777776654210 0135789999987655
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.15 E-value=6e-11 Score=91.93 Aligned_cols=35 Identities=23% Similarity=0.102 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~-----~~G~~V~~~~r 36 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLA-----KQGANVVVNYA 36 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeC
Confidence 346899999999999999999999 79999999998
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.15 E-value=2e-11 Score=97.68 Aligned_cols=126 Identities=13% Similarity=0.037 Sum_probs=80.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CCC-----------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFP----------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~----------------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... ...
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFA-----RRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFR 104 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 45899999999999999999999 7999999999874320 000
Q ss_pred ----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 55 ----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 55 ----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
.+.+ .+++...+++|+.++.++++++...+.......+|+++||...+.
T Consensus 105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 173 (301)
T 3tjr_A 105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV----------- 173 (301)
T ss_dssp HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS-----------
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-----------
Confidence 0000 112345789999999998888755310001135899998865432
Q ss_pred CCCCCccccCCCCCCCCCcchHHHHH----HH----Hh-hCCCceEEEeccCceEeC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYELED----VS----AS-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~e~----~~----~~-~~~g~~~~ivRp~~v~G~ 162 (176)
+ . +....|...+. +. .+ ...|+++.+++|+.|..+
T Consensus 174 ------~----~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 217 (301)
T 3tjr_A 174 ------P----N---AGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETK 217 (301)
T ss_dssp ------C----C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSS
T ss_pred ------C----C---CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccc
Confidence 0 0 11123332221 11 12 356899999999998765
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.3e-11 Score=96.53 Aligned_cols=125 Identities=10% Similarity=-0.029 Sum_probs=81.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CCC-----------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFP----------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~----------------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... ...
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFA-----KAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD 85 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHH-----HHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 7999999999874310 000
Q ss_pred ----CCcc---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 55 ----TALV---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 55 ----~~~v---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
.+.+ .++++..+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 86 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~----------- 153 (256)
T 3gaf_A 86 QFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQ-KAGGGAILNISSMAGENT----------- 153 (256)
T ss_dssp HHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTTCEEEEEECCGGGTCC-----------
T ss_pred HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEEcCHHHcCC-----------
Confidence 0000 112455789999999999888754311 013468999998654320
Q ss_pred CCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~ 162 (176)
. +....|... +.+.+ + ...++++..++|+.|..+
T Consensus 154 ----------~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~ 196 (256)
T 3gaf_A 154 ----------N---VRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTD 196 (256)
T ss_dssp ----------C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCH
T ss_pred ----------C---CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCc
Confidence 0 011233322 22221 2 356899999999999876
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.15 E-value=2.4e-11 Score=96.18 Aligned_cols=125 Identities=16% Similarity=0.140 Sum_probs=80.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C-CC---------C-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W-FP---------T------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~~---------~------------- 55 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... . .. +
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLA-----ARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVE 97 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999 7999999999874310 0 00 0
Q ss_pred -----Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhc--CCCCCCccEEEEeccceeecccccCCCcc
Q 030483 56 -----ALV----------------QESEEVNIFKNSTMLKNVLSVLVSS--NSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 56 -----~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~--~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
+.+ .++++..+++|+.++.++++++... +. ..+..+||++||...+..
T Consensus 98 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~~~g~iV~isS~~~~~~-------- 168 (279)
T 3sju_A 98 RFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMR-EAGWGRIVNIASTGGKQG-------- 168 (279)
T ss_dssp HHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHH-HHTCEEEEEECCGGGTSC--------
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHh-hcCCcEEEEECChhhccC--------
Confidence 000 1123557889999999999887651 00 113468999998654320
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHHH----HHHH----h-hCCCceEEEeccCceEeC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYELE----DVSA----S-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~~----~-~~~g~~~~ivRp~~v~G~ 162 (176)
. +....|...+ .+.+ + ...|+++.+++|+.|..+
T Consensus 169 -------------~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 211 (279)
T 3sju_A 169 -------------V---MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETP 211 (279)
T ss_dssp -------------C---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSH
T ss_pred -------------C---CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccch
Confidence 0 0112333222 1221 2 346899999999999875
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.15 E-value=2.6e-11 Score=95.43 Aligned_cols=36 Identities=25% Similarity=0.198 Sum_probs=33.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la-----~~G~~V~~~~r~~ 61 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFH-----AQGAIVGLHGTRE 61 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 46899999999999999999999 7999999999864
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=3.2e-11 Score=93.67 Aligned_cols=126 Identities=18% Similarity=0.036 Sum_probs=81.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CC---------C-------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WF---------P------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~---------~------------- 54 (176)
+++|++|||||+|+||++++++|+ ++|++|++++|+.... .. .
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 79 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALA-----AEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTV 79 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 567899999999999999999999 7999999999873210 00 0
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .+++...+++|+.++.++++++...+. ..+ .+|+++||...+.
T Consensus 80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~-g~iv~isS~~~~~---------- 147 (247)
T 2jah_A 80 EALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLL-RSK-GTVVQMSSIAGRV---------- 147 (247)
T ss_dssp HHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHT-CEEEEECCGGGTC----------
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HCC-CEEEEEccHHhcC----------
Confidence 0000 112345789999999998888765410 012 5899998864431
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ . +....|...+ .+. .+ ...|+++.+++|+.|..+.
T Consensus 148 -------~----~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 192 (247)
T 2jah_A 148 -------N----V---RNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL 192 (247)
T ss_dssp -------C----C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred -------C----C---CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcc
Confidence 0 0 1112333321 111 22 3568999999999997763
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1.1e-10 Score=91.48 Aligned_cols=126 Identities=9% Similarity=-0.118 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-------------CC----C-CC-----------
Q 030483 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPP-------------GW----F-PT----------- 55 (176)
Q Consensus 7 ~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-------------~~----~-~~----------- 55 (176)
+.+|++|||||+ |+||++++++|+ +.|++|++++|+... .. . .+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMH-----REGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAEL 81 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHH-----HTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHH-----HCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHH
Confidence 446899999999 999999999999 799999999987510 00 0 00
Q ss_pred -------Ccc-------c-----------Cc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeeccccc
Q 030483 56 -------ALV-------Q-----------ES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 107 (176)
Q Consensus 56 -------~~v-------~-----------~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~ 107 (176)
+.+ . .+ ++..+++|+.++.++++++...+. +-.+|+++||...+.
T Consensus 82 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~---- 154 (265)
T 1qsg_A 82 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN---PGSALLTLSYLGAER---- 154 (265)
T ss_dssp HTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECGGGTS----
T ss_pred HHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhc---cCCEEEEEcchhhcc----
Confidence 000 1 11 234688999999999999987521 125899998865432
Q ss_pred CCCccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 108 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 108 d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+. + ....|... +.+.+ + ...++++.++||++|+++..
T Consensus 155 -------------~~----~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 200 (265)
T 1qsg_A 155 -------------AI----P---NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAA 200 (265)
T ss_dssp -------------BC----T---TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTG
T ss_pred -------------CC----C---CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchh
Confidence 10 0 11223322 22222 2 35689999999999998753
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.14 E-value=9.4e-11 Score=91.89 Aligned_cols=36 Identities=22% Similarity=0.069 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~ 47 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLA-----AEGAKLSLVDVSS 47 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 46899999999999999999999 7999999999864
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.3e-10 Score=92.17 Aligned_cols=35 Identities=20% Similarity=0.110 Sum_probs=32.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la-----~~G~~Vv~~~~~ 79 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLA-----QDGADIVAIDLC 79 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEECC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCeEEEEecc
Confidence 46899999999999999999999 799999999876
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.9e-11 Score=95.88 Aligned_cols=129 Identities=11% Similarity=-0.095 Sum_probs=83.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------------CC-C---------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------------WF-P--------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------------~~-~--------------- 54 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.... .. +
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFA-----REGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAV 80 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999 7999999999874210 00 0
Q ss_pred -----CCcc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 55 -----TALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 55 -----~~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
.+.+ .+++...+++|+.++.++++++...+. ..+-.+|+++||...+..
T Consensus 81 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~-------- 151 (280)
T 3tox_A 81 RRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIA-ALGGGSLTFTSSFVGHTA-------- 151 (280)
T ss_dssp HHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTTCEEEEEECCSBTTTB--------
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCCEEEEEcChhhCcC--------
Confidence 0000 112456789999999888888765411 012358999988655410
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ . +....|...+ .+. .+ ...++++.+++|+.|..+..
T Consensus 152 --------~----~---~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~ 197 (280)
T 3tox_A 152 --------G----F---AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPAN 197 (280)
T ss_dssp --------C----C---TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTS
T ss_pred --------C----C---CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchh
Confidence 0 0 1112333222 111 12 46789999999999988754
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.1e-10 Score=89.64 Aligned_cols=128 Identities=9% Similarity=-0.072 Sum_probs=80.5
Q ss_pred CCCCeEEEEcCChH-HHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-CC---------C----------
Q 030483 7 NPKSVALIIGVTGI-SGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-FP---------T---------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGf-iG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~---------~---------- 55 (176)
+.+|++|||||+|+ ||++++++|+ ++|++|++++|+.... . .. +
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRAL-----LEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHH-----HCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHH
Confidence 34689999999985 9999999999 7999999999874310 0 00 0
Q ss_pred --------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCc
Q 030483 56 --------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 56 --------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
+.+ .++++..+++|+.++.++++++...+....+..+|+++||...+.
T Consensus 95 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-------- 166 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR-------- 166 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC--------
T ss_pred HHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC--------
Confidence 000 112345789999999998888776421111346789988764431
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+. +....|... +.+.+ + ...++++.+++|+.|..+.
T Consensus 167 ---------~~-------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 211 (266)
T 3o38_A 167 ---------AQ-------HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKF 211 (266)
T ss_dssp ---------CC-------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred ---------CC-------CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchh
Confidence 00 011223322 22221 1 3568999999999998764
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.14 E-value=3.2e-11 Score=94.62 Aligned_cols=126 Identities=16% Similarity=0.021 Sum_probs=82.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------------------CCC-------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------------------WFP------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------------~~~------------- 54 (176)
+.+|++|||||+|+||++++++|+ ++|++|++++|+.... ...
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCA-----EQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHH-----HCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 356899999999999999999999 7999999999874210 000
Q ss_pred -----CCcc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 55 -----TALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 55 -----~~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
.+.+ .+++...+++|+.++.++++++...+. ..+ .+|+++||...+..
T Consensus 84 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~-g~iv~isS~~~~~~-------- 153 (264)
T 3ucx_A 84 KAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALE-ESK-GAVVNVNSMVVRHS-------- 153 (264)
T ss_dssp HHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHH-HHT-CEEEEECCGGGGCC--------
T ss_pred HHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcC-CEEEEECcchhccC--------
Confidence 0000 113456789999999998888765410 002 58999988654320
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
.+ ....|...+ .+. .+ ...|+++.+++|+.|+++.
T Consensus 154 -------------~~---~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 197 (264)
T 3ucx_A 154 -------------QA---KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGT 197 (264)
T ss_dssp -------------CT---TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHH
T ss_pred -------------CC---ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccccc
Confidence 00 112333222 121 12 4578999999999998763
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.2e-11 Score=95.30 Aligned_cols=133 Identities=14% Similarity=0.034 Sum_probs=78.6
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------------CCC------------
Q 030483 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------------WFP------------ 54 (176)
Q Consensus 3 ~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------------~~~------------ 54 (176)
.|+.+++|++|||||+|+||++++++|+ +.|++|++++|+.... ...
T Consensus 22 ~m~~~~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 96 (272)
T 4dyv_A 22 SMSKTGKKIAIVTGAGSGVGRAVAVALA-----GAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTAT 96 (272)
T ss_dssp ------CCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHH
T ss_pred hhcCCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHH
Confidence 4444567899999999999999999999 7999999999874210 000
Q ss_pred ------CCcc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCC-CCCCccEEEEeccceeecccccCCC
Q 030483 55 ------TALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNS-GRSRLRHVALLTGTKHYMGPIFDPS 110 (176)
Q Consensus 55 ------~~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~-~~~~v~~vv~~Ss~~~yg~~~~d~~ 110 (176)
.+.+ .++++..+++|+.++.++.+++...+. ...+-.+||++||...+.
T Consensus 97 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~------- 169 (272)
T 4dyv_A 97 VEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS------- 169 (272)
T ss_dssp HHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS-------
T ss_pred HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC-------
Confidence 0000 112356789999998887777665421 011135899998865431
Q ss_pred ccCCCCCCCccccCCCCCCCCCcchHHH----HHHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 111 LAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 111 ~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ . +....|... +.+. .| ...++++.+++|+.|..+..
T Consensus 170 ----------~----~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 215 (272)
T 4dyv_A 170 ----------P----R---PYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMA 215 (272)
T ss_dssp ----------C----C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----
T ss_pred ----------C----C---CCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhh
Confidence 0 0 011223322 2222 12 35689999999999987643
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.13 E-value=4.1e-11 Score=93.63 Aligned_cols=129 Identities=9% Similarity=-0.083 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CC-C---------C------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WF-P---------T------------ 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~-~---------~------------ 55 (176)
+.+|++|||||+|+||++++++|+ ++|++|++++|+.... .. . +
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFA-----KEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQID 78 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 557899999999999999999999 7999999999874310 00 0 0
Q ss_pred ------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 56 ------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 56 ------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
+.+ .++++..+++|+.++.++++++...+....+..+|+++||...+..
T Consensus 79 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------- 149 (257)
T 3imf_A 79 EKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA--------- 149 (257)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC---------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC---------
Confidence 000 1134567899999999888887543100112468999988654320
Q ss_pred CCCCCCccccCCCCCCCCCcchHHH----HHHH----Hh-h-CCCceEEEeccCceEeCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYEL----EDVS----AS-Y-SPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~----~~-~-~~g~~~~ivRp~~v~G~~~ 164 (176)
.+ ....|... +.+. .| . ..|+++.+++|+.|.++..
T Consensus 150 ------------~~---~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~ 195 (257)
T 3imf_A 150 ------------GP---GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGG 195 (257)
T ss_dssp ------------CT---TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCC
T ss_pred ------------CC---CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcc
Confidence 00 11223222 1111 12 2 4589999999999988754
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=5.1e-11 Score=94.13 Aligned_cols=125 Identities=17% Similarity=0.071 Sum_probs=81.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------------------CCC-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------------------WFP------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------------------~~~------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... ...
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 100 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFM-----RHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQAL 100 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----TTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 7999999999874210 000
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .+++...+++|+.++.++++++...+. ..+..+||++||...+.+.
T Consensus 101 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~~-------- 171 (277)
T 4fc7_A 101 KEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFF-RDHGGVIVNITATLGNRGQ-------- 171 (277)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTH-HHHCEEEEEECCSHHHHTC--------
T ss_pred HHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCCEEEEECchhhCCCC--------
Confidence 0000 113456789999999999988754310 0123689999886554210
Q ss_pred CCCCCCccccCCCCCCCCCcchHHH----HHHH----Hh-hCCCceEEEeccCceEeC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYEL----EDVS----AS-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~----~~-~~~g~~~~ivRp~~v~G~ 162 (176)
+ ....|... +.+. .+ ...|+++.+++|+.|.++
T Consensus 172 -------------~---~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 213 (277)
T 4fc7_A 172 -------------A---LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGT 213 (277)
T ss_dssp -------------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSS
T ss_pred -------------C---CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecc
Confidence 0 11223222 2111 12 356899999999999876
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.13 E-value=4.4e-11 Score=94.64 Aligned_cols=129 Identities=14% Similarity=-0.061 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC----------CC---------C------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----------FP---------T------------ 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----------~~---------~------------ 55 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+..... .. +
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYA-----EAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMT 104 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 356899999999999999999999 79999999999753210 00 0
Q ss_pred ------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 56 ------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 56 ------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
+.+ .++++..+++|+.++.++++++...+.....-.+|+++||...+...
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~-------- 176 (276)
T 3r1i_A 105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN-------- 176 (276)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC--------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC--------
Confidence 000 11234567899999988888876541000012578888876443210
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHHH-----HHH----h-hCCCceEEEeccCceEeCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELED-----VSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e~-----~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ +.+...|...| +.+ + ...++++.+++|+.|..+.
T Consensus 177 -------------~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 221 (276)
T 3r1i_A 177 -------------I--PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTEL 221 (276)
T ss_dssp -------------C--SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTT
T ss_pred -------------C--CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCc
Confidence 0 01122233222 221 1 3468999999999998764
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.6e-11 Score=96.89 Aligned_cols=127 Identities=10% Similarity=-0.024 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------------CC-C---------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------------WF-P--------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------------~~-~--------------- 54 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.... .. +
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLA-----VAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLD 98 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 346899999999999999999999 7999999998864210 00 0
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .++++..+++|+.++.++.+++...+. ..+..+||++||...+.
T Consensus 99 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~~~g~iV~isS~~~~~---------- 167 (271)
T 4ibo_A 99 EQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMI-PRGYGKIVNIGSLTSEL---------- 167 (271)
T ss_dssp HHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTS----------
T ss_pred HHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEEccHHhCC----------
Confidence 0000 113456789999999888777665411 01235899998864431
Q ss_pred CCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ . +....|... +.+.+ + ...|+++..++|+.|..+.
T Consensus 168 -------~----~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 212 (271)
T 4ibo_A 168 -------A----R---ATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDM 212 (271)
T ss_dssp -------B----C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred -------C----C---CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcc
Confidence 0 0 011223322 22221 2 3568999999999998764
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.8e-10 Score=90.10 Aligned_cols=127 Identities=10% Similarity=-0.016 Sum_probs=83.3
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecCCC------------CCCC----C--------------
Q 030483 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPP------------PGWF----P-------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~------------~~~~----~-------------- 54 (176)
+.+|++|||||+ |+||++++++|+ +.|++|++++|+.. .... +
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 93 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFH-----REGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFL 93 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHH-----HTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHH
Confidence 345789999999 999999999999 78999999998752 0000 0
Q ss_pred ------CCcc-------c---------C----cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccC
Q 030483 55 ------TALV-------Q---------E----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 108 (176)
Q Consensus 55 ------~~~v-------~---------~----~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d 108 (176)
.+.+ . + ++...+++|+.++.++++++...+. . +-.+||++||...+.
T Consensus 94 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~-~~g~iv~isS~~~~~----- 166 (285)
T 2p91_A 94 EENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLME-G-RNGAIVTLSYYGAEK----- 166 (285)
T ss_dssp HHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGT-T-SCCEEEEEECGGGTS-----
T ss_pred HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-H-cCCEEEEEccchhcc-----
Confidence 0000 1 0 1245689999999999999887631 1 126899998864432
Q ss_pred CCccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 109 PSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 109 ~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+. + ....|... +.+.+ + ...|+++.+++|+.|.++..
T Consensus 167 ------------~~----~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 212 (285)
T 2p91_A 167 ------------VV----P---HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAA 212 (285)
T ss_dssp ------------BC----T---TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC
T ss_pred ------------CC----C---CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchh
Confidence 10 0 11223322 22221 2 35689999999999998854
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.13 E-value=2.9e-10 Score=88.33 Aligned_cols=36 Identities=19% Similarity=0.319 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~-----~~G~~v~~~~~~~ 47 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLH-----KDGFRVVAGCGPN 47 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHH-----HTTEEEEEEECTT
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCC
Confidence 56899999999999999999999 7999999988443
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.13 E-value=5.8e-11 Score=94.86 Aligned_cols=126 Identities=9% Similarity=-0.029 Sum_probs=81.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------C---C------C-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------W---F------P------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~---~------~------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... . . +
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 99 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFA-----KEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT 99 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence 46899999999999999999999 7999999999874210 0 0 0
Q ss_pred -------CCcc--------c----------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCC
Q 030483 55 -------TALV--------Q----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 109 (176)
Q Consensus 55 -------~~~v--------~----------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~ 109 (176)
.+.+ . ++++..+++|+.++.++++++...+. ..+ .+||++||...+..
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~~-g~IV~isS~~~~~~----- 172 (297)
T 1xhl_A 100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLI-KTK-GEIVNVSSIVAGPQ----- 172 (297)
T ss_dssp HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTT-CEEEEECCGGGSSS-----
T ss_pred HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH-hcC-CEEEEEcCchhccC-----
Confidence 0000 1 12345789999999888888776421 012 68999998654420
Q ss_pred CccCCCCCCCccccCCCCCCCCCcchHHHH----HHHH----h-hCCCceEEEeccCceEeCC
Q 030483 110 SLAGQLMPYEVPFKEDSSRLPFPNFYYELE----DVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 110 ~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. .+ ....|...+ .+.+ + ...|+++.++||++|.++.
T Consensus 173 ----------~-----~~---~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~ 217 (297)
T 1xhl_A 173 ----------A-----HS---GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF 217 (297)
T ss_dssp ----------C-----CT---TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred ----------C-----CC---CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcc
Confidence 0 01 112333222 1111 1 3568999999999998764
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=3.4e-11 Score=94.28 Aligned_cols=126 Identities=11% Similarity=-0.006 Sum_probs=80.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE-ecCCCCC---------CC-C---------C------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPG---------WF-P---------T------------ 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~---------~~-~---------~------------ 55 (176)
.+|++|||||+|+||++++++|+ +.|++|+.+ .|+.... .. . +
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLA-----ENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQID 77 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 35799999999999999999999 799999886 6653210 00 0 0
Q ss_pred ------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 56 ------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 56 ------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
+.+ .++++..+++|+.++.++++++...+. ..+..+||++||...+.
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~-~~~~g~iv~isS~~~~~---------- 146 (258)
T 3oid_A 78 ETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLME-KNGGGHIVSISSLGSIR---------- 146 (258)
T ss_dssp HHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-TTTCEEEEEEEEGGGTS----------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEECchhhCC----------
Confidence 001 112355789999999998888765321 11346899999865432
Q ss_pred CCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ . +....|... +.+.+ + ...++++.+++|+.|..+.
T Consensus 147 -------~----~---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 191 (258)
T 3oid_A 147 -------Y----L---ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDA 191 (258)
T ss_dssp -------B----C---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGG
T ss_pred -------C----C---CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChh
Confidence 1 0 011233322 22221 1 3458999999999998764
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.9e-09 Score=88.09 Aligned_cols=89 Identities=11% Similarity=0.064 Sum_probs=64.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC---------------C-----------C------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF---------------P-----------T------ 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~---------------~-----------~------ 55 (176)
.+|++|||||+|.||++++++|+ ++|++|++++|+...... . +
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La-----~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~ 118 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAA-----KDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA 118 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----TTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHH-----HCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence 46899999999999999999999 799999999998653100 0 0
Q ss_pred ------------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 56 ------------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 56 ------------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
+.+ .++++..+++|+.++.++++++...+. ..+..+||++||...+
T Consensus 119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~-~~~~g~IV~iSS~~~~ 192 (346)
T 3kvo_A 119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLK-KSKVAHILNISPPLNL 192 (346)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHT-TCSSCEEEEECCCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HCCCCEEEEECCHHHc
Confidence 000 112356789999999999999865422 1234689999986544
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.12 E-value=9.1e-11 Score=92.14 Aligned_cols=126 Identities=13% Similarity=0.037 Sum_probs=80.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------------------CCC-----------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------------------WFP----------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------------------~~~----------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... ...
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFA-----AAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 7999999999874210 000
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .++++..+++|+.++.++++++...+.....-.+|+++||...+..
T Consensus 94 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--------- 164 (266)
T 4egf_A 94 EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP--------- 164 (266)
T ss_dssp HHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC---------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC---------
Confidence 0000 1124557899999998888887654100011358999988655421
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~ 162 (176)
. +....|...+ .+. .+ ...|+++..++|+.|..+
T Consensus 165 ------------~---~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 207 (266)
T 4egf_A 165 ------------L---PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTE 207 (266)
T ss_dssp ------------C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSH
T ss_pred ------------C---CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCc
Confidence 0 0112233222 111 12 356899999999999876
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.6e-10 Score=90.09 Aligned_cols=125 Identities=10% Similarity=0.006 Sum_probs=80.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC--C----------CCC---------C-----------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--G----------WFP---------T----------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--~----------~~~---------~----------- 55 (176)
++|++|||||+|+||++++++|+ +.|++|++++|+... . ... +
T Consensus 1 ~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 75 (258)
T 3a28_C 1 MSKVAMVTGGAQGIGRGISEKLA-----ADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEA 75 (258)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 35789999999999999999999 789999999986532 0 000 0
Q ss_pred -------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-cEEEEeccceeecccccCCCc
Q 030483 56 -------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL-RHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 56 -------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v-~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
+.+ .+++...+++|+.++.++++++...+. ..+. .+|+++||...+.+
T Consensus 76 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~~g~iv~isS~~~~~~------- 147 (258)
T 3a28_C 76 AEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFD-ELGVKGKIINAASIAAIQG------- 147 (258)
T ss_dssp HHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCCCEEEEECCGGGTSC-------
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHH-hcCCCcEEEEECcchhccC-------
Confidence 000 112345789999999888888765311 0124 68999988654320
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~ 162 (176)
.+ ....|... +.+.+ + ...++++.+++|+.|..+
T Consensus 148 --------------~~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 190 (258)
T 3a28_C 148 --------------FP---ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTG 190 (258)
T ss_dssp --------------CT---TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSH
T ss_pred --------------CC---CchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCCh
Confidence 00 11233322 22221 2 356899999999998765
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.11 E-value=8.7e-11 Score=93.23 Aligned_cols=129 Identities=16% Similarity=0.032 Sum_probs=82.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C-C---------CC-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W-F---------PT------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~---------~~------------- 55 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... . . .+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALA-----ADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL 101 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35889999999999999999999 7999999999874310 0 0 00
Q ss_pred -----Ccc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 56 -----ALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 56 -----~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
+.+ .++++..+++|+.++.++++++...+. ..+..+||++||...+..
T Consensus 102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~Iv~isS~~~~~~--------- 171 (283)
T 3v8b_A 102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLK-QRGGGAIVVVSSINGTRT--------- 171 (283)
T ss_dssp HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCSBTTTB---------
T ss_pred HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCceEEEEcChhhccC---------
Confidence 000 112356789999999988888743210 013468999998644310
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHH----HHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELE----DVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+ . +....|...+ .+.+ + ...|+++.+++|+.|..+..
T Consensus 172 ------~~----~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 218 (283)
T 3v8b_A 172 ------FT----T---PGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNIS 218 (283)
T ss_dssp ------CC----S---TTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTT
T ss_pred ------CC----C---CCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcc
Confidence 00 0 1112333222 1221 2 35689999999999987654
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=2.1e-10 Score=91.49 Aligned_cols=131 Identities=10% Similarity=-0.079 Sum_probs=85.6
Q ss_pred CcCCCCCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------------CCCC------
Q 030483 2 EKQDQNPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------------WFPT------ 55 (176)
Q Consensus 2 ~~~~~~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------------~~~~------ 55 (176)
..+..+.+|++|||||+| +||++++++|+ +.|++|++++|+.... ...+
T Consensus 23 ~~~~~l~~k~vlVTGasg~~GIG~~ia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 97 (296)
T 3k31_A 23 RTGMLMEGKKGVIIGVANDKSLAWGIAKAVC-----AQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDN 97 (296)
T ss_dssp CCCCTTTTCEEEEECCCSTTSHHHHHHHHHH-----HTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHH
T ss_pred cchhccCCCEEEEEeCCCCCCHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence 333334578999999997 99999999999 7999999999875210 0000
Q ss_pred ------------Ccc------c--------------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeec
Q 030483 56 ------------ALV------Q--------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 103 (176)
Q Consensus 56 ------------~~v------~--------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg 103 (176)
+.+ . +++...+++|+.++.++++++...+. +-.+||++||...+.
T Consensus 98 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~---~~g~IV~isS~~~~~ 174 (296)
T 3k31_A 98 MFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMT---NGGSILTLSYYGAEK 174 (296)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT---TCEEEEEEECGGGTS
T ss_pred HHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---cCCEEEEEEehhhcc
Confidence 000 1 12345789999999999999987631 235899998865432
Q ss_pred ccccCCCccCCCCCCCccccCCCCCCCCCcchHHH----HHHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 104 GPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 104 ~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ .+ ....|... +.+. .+ ...++++.+++|+.|..+..
T Consensus 175 -----------------~----~~---~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~ 220 (296)
T 3k31_A 175 -----------------V----VP---HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLAS 220 (296)
T ss_dssp -----------------C----CT---TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSC
T ss_pred -----------------C----CC---CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchh
Confidence 0 00 11223322 2121 12 45689999999999988753
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.10 E-value=2.3e-10 Score=88.47 Aligned_cols=126 Identities=13% Similarity=0.077 Sum_probs=70.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----CC--------------------------CC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WF--------------------------PT 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~--------------------------~~ 55 (176)
+.+|++|||||+|+||++++++|+ + |+.|++++|+.... .. ..
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~-----~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i 76 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLS-----R-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHV 76 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHT-----T-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHh-----C-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCC
Confidence 356899999999999999999998 5 88999999874210 00 00
Q ss_pred Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCC
Q 030483 56 ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 119 (176)
Q Consensus 56 ~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~ 119 (176)
+.+ .+++...+++|+.++.++++++...+. ..+ .+|+++||...+...
T Consensus 77 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~-g~iv~isS~~~~~~~-------------- 140 (245)
T 3e9n_A 77 DTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALR-AAS-GCVIYINSGAGNGPH-------------- 140 (245)
T ss_dssp SEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHT-CEEEEEC----------------------
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-hcC-CeEEEEcCcccccCC--------------
Confidence 111 112345688999998777777654310 002 579999887655310
Q ss_pred ccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 120 VPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 120 ~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ ....|... +.+.+ + ...++++.+++|+.|.++..
T Consensus 141 -------~---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 184 (245)
T 3e9n_A 141 -------P---GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPML 184 (245)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----
T ss_pred -------C---CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchh
Confidence 0 11223322 22222 1 35689999999999988754
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=5.8e-11 Score=92.30 Aligned_cols=127 Identities=13% Similarity=0.025 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------------CC-C------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------------WF-P------------------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------~~-~------------------ 54 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.... .. +
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 78 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLA-----ADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALT 78 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 567899999999999999999999 7999999999874210 00 0
Q ss_pred --CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCC
Q 030483 55 --TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 116 (176)
Q Consensus 55 --~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~ 116 (176)
.+.+ .+++...+++|+.++.++.+++...+.......+|+++||...+.+.
T Consensus 79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 147 (247)
T 3rwb_A 79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT----------- 147 (247)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC-----------
Confidence 0001 11345678999999888888744321001124689999886554210
Q ss_pred CCCccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeC
Q 030483 117 PYEVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 117 ~~~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~ 162 (176)
+ ....|...+ .+. .+ ..+|+++.+++|+.|..+
T Consensus 148 ----------~---~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 189 (247)
T 3rwb_A 148 ----------P---NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESD 189 (247)
T ss_dssp ----------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred ----------C---CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence 0 112233222 111 12 356899999999999765
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.10 E-value=5.7e-11 Score=93.41 Aligned_cols=128 Identities=14% Similarity=0.030 Sum_probs=77.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE-ecCCCCC---------C-C---------C--------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPG---------W-F---------P-------------- 54 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~---------~-~---------~-------------- 54 (176)
++++|||||+|+||++++++|+ +.|++|+.+ .|+.... . . .
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 100 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAA-----RQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDR 100 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 5789999999999999999999 799999877 4432110 0 0 0
Q ss_pred ----CCcc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCC--CCCccEEEEeccceeecccccCCCc
Q 030483 55 ----TALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSG--RSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 55 ----~~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~--~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
.+.+ .+++.+.+++|+.++.++++++...+.. ..+..+|+++||...+.+.
T Consensus 101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 174 (272)
T 4e3z_A 101 QFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS------ 174 (272)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC------
T ss_pred hCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC------
Confidence 0001 1123457899999999888887654210 0124679999987654311
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ +....|... +.+.+ + ...++++.+++|+.|.++..
T Consensus 175 ---------------~--~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 219 (272)
T 4e3z_A 175 ---------------A--TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLH 219 (272)
T ss_dssp ---------------T--TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----
T ss_pred ---------------C--CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcc
Confidence 0 001223222 22221 2 35589999999999998753
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=6e-10 Score=87.69 Aligned_cols=125 Identities=10% Similarity=-0.053 Sum_probs=82.5
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC------------CCC----C--C-----------
Q 030483 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPP------------GWF----P--T----------- 55 (176)
Q Consensus 7 ~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~------------~~~----~--~----------- 55 (176)
+.+|++|||||+ |+||++++++|+ +.|++|++++|+... ... + +
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~ 78 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCF-----NQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSV 78 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHH-----TTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHH
Confidence 456899999999 999999999999 789999999997630 000 0 0
Q ss_pred -------Ccc-------c-----C--------cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccC
Q 030483 56 -------ALV-------Q-----E--------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 108 (176)
Q Consensus 56 -------~~v-------~-----~--------~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d 108 (176)
+.+ . . +++..+++|+.++.++++++...+. +-.+||++||...+.
T Consensus 79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~----- 150 (275)
T 2pd4_A 79 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN---NGASVLTLSYLGSTK----- 150 (275)
T ss_dssp HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECGGGTS-----
T ss_pred HHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhc---cCCEEEEEecchhcC-----
Confidence 000 1 0 1245688999999999999887521 125899998854431
Q ss_pred CCccCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 109 PSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 109 ~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+. + ....|... +.+.+ + ...|+++.+++|+.|.++.
T Consensus 151 ------------~~----~---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 195 (275)
T 2pd4_A 151 ------------YM----A---HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA 195 (275)
T ss_dssp ------------BC----T---TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred ------------CC----C---CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccch
Confidence 10 0 11223322 22221 2 4568999999999998874
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.09 E-value=4.5e-11 Score=94.01 Aligned_cols=126 Identities=17% Similarity=0.041 Sum_probs=80.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-CC----------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-FP---------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~---------------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... . ..
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 102 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLA-----SMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIV 102 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 7999999999953210 0 00
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .+++.+.+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 103 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~--------- 172 (271)
T 4iin_A 103 QSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMS-KSRFGSVVNVASIIGERG--------- 172 (271)
T ss_dssp HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCHHHHHC---------
T ss_pred HhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHh-hcCCCEEEEEechhhcCC---------
Confidence 0000 112356789999998887777654311 013468999988654321
Q ss_pred CCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. + ....|... +.+.+ + ...++++.+++|+.|..+.
T Consensus 173 ------~------~---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 216 (271)
T 4iin_A 173 ------N------M---GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDM 216 (271)
T ss_dssp ------C------T---TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-
T ss_pred ------C------C---CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCc
Confidence 0 0 11223322 22221 1 3578999999999998764
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.09 E-value=3.8e-10 Score=89.36 Aligned_cols=128 Identities=16% Similarity=0.052 Sum_probs=77.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------------------CCC-----------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------------------WFP----------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------------------~~~----------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... ...
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 102 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALA-----ASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVV 102 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHH-----HCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 45889999999999999999999 7999999998743210 000
Q ss_pred -----CCcc------------------cCcHHHHHHHHHHHHHHHHHHHHhcCC--CCCCccEEEEeccceeecccccCC
Q 030483 55 -----TALV------------------QESEEVNIFKNSTMLKNVLSVLVSSNS--GRSRLRHVALLTGTKHYMGPIFDP 109 (176)
Q Consensus 55 -----~~~v------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~--~~~~v~~vv~~Ss~~~yg~~~~d~ 109 (176)
.+.+ .+++...+++|+.++.++++++...+. ...+..+||++||...+...
T Consensus 103 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---- 178 (280)
T 4da9_A 103 AEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS---- 178 (280)
T ss_dssp HHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC----------
T ss_pred HHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC----
Confidence 0000 112345678999999888888765420 00113589999986554210
Q ss_pred CccCCCCCCCccccCCCCCCCCCcchHHH----HHHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 110 SLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 110 ~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ ....|... +.+. .+ ...++++.+++|+.|..+..
T Consensus 179 -----------------~---~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 222 (280)
T 4da9_A 179 -----------------P---ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMT 222 (280)
T ss_dssp ---------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---
T ss_pred -----------------C---CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCch
Confidence 0 11223322 2222 12 35789999999999988754
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.6e-10 Score=90.65 Aligned_cols=129 Identities=8% Similarity=-0.056 Sum_probs=82.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------CC----------CC--------
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------WF----------PT-------- 55 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~~----------~~-------- 55 (176)
.+.+|++|||||+|+||++++++|+ +.|++|+.++|..... .. .+
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 82 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFA-----LESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLF 82 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHT-----TSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 3457899999999999999999999 7999999987753210 00 00
Q ss_pred ----------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCC
Q 030483 56 ----------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 109 (176)
Q Consensus 56 ----------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~ 109 (176)
+.+ .+++...+++|+.++.++++++...+ .+-.+|+++||...+...
T Consensus 83 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m---~~~g~iv~isS~~~~~~~---- 155 (262)
T 3ksu_A 83 DFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHM---NPNGHIITIATSLLAAYT---- 155 (262)
T ss_dssp HHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTE---EEEEEEEEECCCHHHHHH----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhh---cCCCEEEEEechhhccCC----
Confidence 000 11234578899999999999988752 134689999887665311
Q ss_pred CccCCCCCCCccccCCCCCCCCCcchHHHHHHH----Hh-hCCCceEEEeccCceEeC
Q 030483 110 SLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVS----AS-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 110 ~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~----~~-~~~g~~~~ivRp~~v~G~ 162 (176)
+ ... .+...+.+.+.+. .+ ...++++..++|+.|..+
T Consensus 156 -----------~--~~~---~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (262)
T 3ksu_A 156 -----------G--FYS---TYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTS 197 (262)
T ss_dssp -----------C--CCC---C-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTH
T ss_pred -----------C--CCc---hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCc
Confidence 0 000 1111122222222 22 456899999999998654
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.2e-10 Score=89.26 Aligned_cols=123 Identities=16% Similarity=0.098 Sum_probs=77.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C-C---------C-----------C----Ccc
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W-F---------P-----------T----ALV 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~---------~-----------~----~~v 58 (176)
|++|||||+|+||++++++|+ +.|++|++++|+.... . . . . +.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~l 76 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYD-----AEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTV 76 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHH-----HTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred CEEEEecCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence 579999999999999999999 7999999999975310 0 0 0 0 011
Q ss_pred ----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccc
Q 030483 59 ----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 59 ----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~ 122 (176)
.++++..+++|+.++.++++++...+... + .+|+++||...+..
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~-~~iv~isS~~~~~~------------------ 136 (230)
T 3guy_A 77 VHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ-P-VNVVMIMSTAAQQP------------------ 136 (230)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-C-CEEEEECCGGGTSC------------------
T ss_pred EEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C-CeEEEEeecccCCC------------------
Confidence 11234578999999999999887652111 2 27898888654320
Q ss_pred cCCCCCCCCCcchHHH----HHHH----Hh-hCCCceEEEeccCceEeCC
Q 030483 123 KEDSSRLPFPNFYYEL----EDVS----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 123 ~E~~~~~~~~~~y~~~----e~~~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. +....|... +.+. .+ ...++++..++|+.|..+-
T Consensus 137 ---~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 180 (230)
T 3guy_A 137 ---K---AQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEF 180 (230)
T ss_dssp ---C---TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC----
T ss_pred ---C---CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChH
Confidence 0 011233322 2221 12 3568999999999987664
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.08 E-value=1.6e-10 Score=89.31 Aligned_cols=88 Identities=17% Similarity=0.056 Sum_probs=62.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC--------------C------CC--CC----------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--------------G------WF--PT---------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--------------~------~~--~~---------- 55 (176)
.+|++|||||+|+||++++++|+ ++|++|++++|+... . .. .+
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYA-----AHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence 46899999999999999999999 799999999987321 0 00 00
Q ss_pred --------Ccc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 56 --------ALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 56 --------~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
+.+ .+++.+.+++|+.++.++++++...+. ..+..+|+++||...
T Consensus 88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~iv~isS~~~ 157 (247)
T 3i1j_A 88 VEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLK-RSEDASIAFTSSSVG 157 (247)
T ss_dssp HHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHT-TSSSEEEEEECCGGG
T ss_pred HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hCCCCeEEEEcchhh
Confidence 000 112345789999999999988864321 113468999988644
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.08 E-value=5.4e-11 Score=92.03 Aligned_cols=128 Identities=19% Similarity=0.156 Sum_probs=82.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CC---------C-------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WF---------P------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~---------~------------- 54 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.... .. .
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALA-----SKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIK 77 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 456899999999999999999999 7999999999874210 00 0
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .+++...+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 78 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~--------- 147 (247)
T 3lyl_A 78 AENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMM-KKRWGRIISIGSVVGSAG--------- 147 (247)
T ss_dssp HTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCTHHHHC---------
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCeEEEEEcchhhccC---------
Confidence 0001 112345789999999888888765310 012358999988655421
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHH----HHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELE----DVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. + ....|...+ .+.+ + ...++++.+++|+.|..+..
T Consensus 148 ------~------~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 192 (247)
T 3lyl_A 148 ------N------P---GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMT 192 (247)
T ss_dssp ------C------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTT
T ss_pred ------C------C---CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccc
Confidence 0 0 112233221 1222 1 35689999999999987653
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.08 E-value=3.5e-10 Score=88.24 Aligned_cols=37 Identities=27% Similarity=0.347 Sum_probs=33.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC---cEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP---WKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g---~~V~~l~R~~~ 49 (176)
.++++|||||+|+||++++++|+ +.| ++|++++|+..
T Consensus 20 ~~k~vlITGasggIG~~la~~L~-----~~G~~~~~V~~~~r~~~ 59 (267)
T 1sny_A 20 HMNSILITGCNRGLGLGLVKALL-----NLPQPPQHLFTTCRNRE 59 (267)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHH-----TSSSCCSEEEEEESCTT
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-----hcCCCCcEEEEEecChh
Confidence 46799999999999999999999 688 99999999754
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.9e-10 Score=90.46 Aligned_cols=125 Identities=14% Similarity=-0.013 Sum_probs=81.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------CCC---------C------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------WFP---------T------------ 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~---------~------------ 55 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... ... +
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLG-----RLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAV 91 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 7999999887653210 000 0
Q ss_pred ------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 56 ------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 56 ------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
+.+ .+++...+++|+.++.++++++...+. +-.+|+++||.....
T Consensus 92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~---~~g~iv~isS~~~~~---------- 158 (270)
T 3is3_A 92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLT---EGGRIVLTSSNTSKD---------- 158 (270)
T ss_dssp HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC---TTCEEEEECCTTTTT----------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh---cCCeEEEEeCchhcc----------
Confidence 000 113456789999999999999887631 234899998753210
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHH----HHHH----h-hCCCceEEEeccCceEeCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELE----DVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
.+ . +....|...+ .+.+ + ...|+++..++|+.|..+.
T Consensus 159 ------~~------~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 204 (270)
T 3is3_A 159 ------FS------V-PKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM 204 (270)
T ss_dssp ------CC------C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTT
T ss_pred ------CC------C-CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence 00 0 1112333221 1111 2 3568999999999998764
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.07 E-value=2.9e-10 Score=89.83 Aligned_cols=125 Identities=11% Similarity=0.101 Sum_probs=81.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------C-C---------C-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------F-P---------T------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~-~---------~------------- 55 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+..... . . +
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 106 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLA-----GAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEA 106 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 79999999999764310 0 0 0
Q ss_pred ----Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 56 ----ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 56 ----~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
+.+ .+++...+++|+.++.++++++...+. ..+..+||++||...+.
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~Iv~isS~~~~~------------ 173 (275)
T 4imr_A 107 IAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMV-ARKWGRVVSIGSINQLR------------ 173 (275)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTS------------
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEECCHHhCC------------
Confidence 000 112355789999999888888754310 01346899998864431
Q ss_pred CCCCccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~ 162 (176)
+. +....|...+ .+. .+ ...++++..++|+.|..+
T Consensus 174 -----------~~-~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 217 (275)
T 4imr_A 174 -----------PK-SVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTD 217 (275)
T ss_dssp -----------CC-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred -----------CC-CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCc
Confidence 10 0112243322 111 12 356899999999998765
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.07 E-value=3e-11 Score=95.27 Aligned_cols=125 Identities=17% Similarity=0.111 Sum_probs=80.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------------------CCC--------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------------------WFP-------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------------~~~-------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... ...
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELA-----RRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLK 101 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999 7999999999874210 000
Q ss_pred ----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 55 ----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 55 ----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
.+.+ .++++..+++|+.++.++++++...+. ..+-.+||++||...+..
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~---------- 170 (270)
T 3ftp_A 102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMM-KARGGRIVNITSVVGSAG---------- 170 (270)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCHHHHHC----------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCCEEEEECchhhCCC----------
Confidence 0000 113456789999999999888764310 012357999988655421
Q ss_pred CCCCCccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~ 162 (176)
. +....|...+ .+. .+ ...|+++.+++|+.|..+
T Consensus 171 -----~---------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 213 (270)
T 3ftp_A 171 -----N---------PGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTD 213 (270)
T ss_dssp -----C---------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSH
T ss_pred -----C---------CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCc
Confidence 0 0112233222 111 12 356899999999999765
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.1e-09 Score=87.40 Aligned_cols=35 Identities=23% Similarity=0.120 Sum_probs=32.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la-----~~G~~V~~~~~~ 61 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLA-----REGADIIAIDVC 61 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEECC
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEecc
Confidence 35899999999999999999999 799999999987
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.2e-10 Score=91.39 Aligned_cols=36 Identities=28% Similarity=0.261 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~ 44 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLV-----AEGANVLINGRRE 44 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 46899999999999999999999 7999999999874
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.05 E-value=1e-09 Score=85.80 Aligned_cols=88 Identities=9% Similarity=-0.076 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CC-C---------C-----------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WF-P---------T----------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~-~---------~----------- 55 (176)
+.+|++|||||+|+||++++++|+ +.|++|+++.++.... .. . +
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFA-----QEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAA 80 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 567899999999999999999999 7999999885543210 00 0 0
Q ss_pred -------Ccc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 56 -------ALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 56 -------~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
+.+ .+.+...+++|+.++.++++++...+ .+-.+||++||...+
T Consensus 81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~---~~~g~iv~isS~~~~ 148 (259)
T 3edm_A 81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKM---AKGGAIVTFSSQAGR 148 (259)
T ss_dssp HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGE---EEEEEEEEECCHHHH
T ss_pred HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCEEEEEcCHHhc
Confidence 000 11235678999999999999998762 122479999886554
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.05 E-value=8.7e-11 Score=92.50 Aligned_cols=126 Identities=17% Similarity=0.086 Sum_probs=77.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------------------CCC--------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------------------WFP-------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------------~~~-------------- 54 (176)
++|++|||||+|+||++++++|+ +.|++|++++|+.... ...
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 77 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELG-----VAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVD 77 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 56899999999999999999999 7999999999874210 000
Q ss_pred ----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 55 ----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 55 ----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
.+.+ .+++...+++|+.++.++.+++...+. ..+..+||++||...+..
T Consensus 78 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~IV~isS~~~~~~---------- 146 (264)
T 3tfo_A 78 TWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIME-AQRSGQIINIGSIGALSV---------- 146 (264)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTCC----------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCeEEEEEcCHHHccc----------
Confidence 0000 123456789999998887777654310 013468999988654320
Q ss_pred CCCCCccccCCCCCCCCCcchHHHHH----HHHh---hCCCceEEEeccCceEeCC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYELED----VSAS---YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~e~----~~~~---~~~g~~~~ivRp~~v~G~~ 163 (176)
. +....|...+. +.+. ...++++..++|+.|..+-
T Consensus 147 -----------~---~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~ 188 (264)
T 3tfo_A 147 -----------V---PTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESEL 188 (264)
T ss_dssp -----------C---TTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----
T ss_pred -----------C---CCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcc
Confidence 0 01122333221 1111 1248999999999997764
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.04 E-value=1.9e-10 Score=90.50 Aligned_cols=123 Identities=12% Similarity=0.004 Sum_probs=78.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-CC---------C-------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-FP---------T------------- 55 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~---------~------------- 55 (176)
+|++|||||+|+||++++++|+ +.|++|+.+.++.... . .. +
T Consensus 27 ~k~~lVTGas~GIG~aia~~la-----~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLA-----SDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE 101 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHH-----HHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 6889999999999999999999 7999998875543210 0 00 0
Q ss_pred -----Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 56 -----ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 56 -----~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
+.+ .++++..+++|+.++.++++++...+ .+-.+|+++||...+..
T Consensus 102 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~---~~~g~iv~isS~~~~~~---------- 168 (267)
T 3u5t_A 102 AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRL---RVGGRIINMSTSQVGLL---------- 168 (267)
T ss_dssp HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHE---EEEEEEEEECCTHHHHC----------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH---hhCCeEEEEeChhhccC----------
Confidence 000 11235578899999999998887652 12258999988654321
Q ss_pred CCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
.+ ....|... +.+.+ | ...|+++..++|+.|..+.
T Consensus 169 -----------~~---~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 212 (267)
T 3u5t_A 169 -----------HP---SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDL 212 (267)
T ss_dssp -----------CT---TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---
T ss_pred -----------CC---CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcc
Confidence 00 11223322 22221 2 3568999999999997664
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.04 E-value=7.2e-11 Score=92.41 Aligned_cols=90 Identities=14% Similarity=0.012 Sum_probs=62.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CC---------C-------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WF---------P------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~---------~------------- 54 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.... .. .
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLA-----EEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVV 79 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 557899999999999999999999 7999999999874210 00 0
Q ss_pred -----CCcc------c-----------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 55 -----TALV------Q-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 55 -----~~~v------~-----------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
.+.+ . +++...+++|+.++.++++++...+. ..+..+||++||...+
T Consensus 80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~ 148 (262)
T 1zem_A 80 RDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMI-TQNYGRIVNTASMAGV 148 (262)
T ss_dssp HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCHHHH
T ss_pred HHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEcchhhc
Confidence 0000 1 12345788999999888888765410 0124689999886554
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.04 E-value=8e-10 Score=86.71 Aligned_cols=127 Identities=13% Similarity=0.081 Sum_probs=80.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-CC---------C------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-FP---------T------------ 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~---------~------------ 55 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... . .. +
T Consensus 24 ~~k~vlITGas~gIG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 98 (269)
T 3gk3_A 24 AKRVAFVTGGMGGLGAAISRRLH-----DAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVL 98 (269)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHH-----TTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 35789999999999999999999 7999999988543210 0 00 0
Q ss_pred ------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 56 ------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 56 ------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
+.+ .+++...+++|+.++.++++++...+. ..+..+||++||...+...
T Consensus 99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~~-------- 169 (269)
T 3gk3_A 99 ADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMV-ERRFGRIVNIGSVNGSRGA-------- 169 (269)
T ss_dssp HHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCHHHHHCC--------
T ss_pred HHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEeCChhhccCC--------
Confidence 000 112355789999998888888754210 0134689999886544210
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHH----HHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELE----DVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e----~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+....|...+ .+. .+ ...++++.+++|+.|..+..
T Consensus 170 ----------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 213 (269)
T 3gk3_A 170 ----------------FGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMV 213 (269)
T ss_dssp ----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTT
T ss_pred ----------------CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhh
Confidence 0112233221 111 12 35689999999999987654
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.1e-09 Score=86.48 Aligned_cols=35 Identities=20% Similarity=0.113 Sum_probs=32.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la-----~~G~~V~~~~~~ 44 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLA-----QEGADIIAVDIC 44 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEecc
Confidence 46899999999999999999999 799999999886
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.6e-10 Score=89.99 Aligned_cols=34 Identities=26% Similarity=0.346 Sum_probs=31.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 22 k~vlVTGas~gIG~aia~~La-----~~G~~V~~~~r~~ 55 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFA-----EAGWSLVLTGRRE 55 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred cEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 889999999999999999999 7999999999874
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.03 E-value=1.3e-09 Score=85.78 Aligned_cols=36 Identities=17% Similarity=0.095 Sum_probs=32.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la-----~~G~~V~~~~r~ 44 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMA-----AEGADIIAVDIA 44 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEECC
T ss_pred cCCCEEEEECCccHHHHHHHHHHH-----HcCCEEEEEecc
Confidence 346899999999999999999999 799999999884
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.03 E-value=3.4e-10 Score=89.25 Aligned_cols=36 Identities=19% Similarity=0.113 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~-----~~G~~Vi~~~r~~ 64 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLH-----ADGLGVVIADLAA 64 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCh
Confidence 46789999999999999999999 7999999999874
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=1.6e-10 Score=89.87 Aligned_cols=122 Identities=17% Similarity=0.134 Sum_probs=78.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC----------C------C--C----------------CC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP----------G------W--F----------------PT 55 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----------~------~--~----------------~~ 55 (176)
|++|||||+|+||++++++|+ +.|++|++++|+... . . . ..
T Consensus 1 k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 75 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFI-----QQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNI 75 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred CEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 579999999999999999999 799999999987421 0 0 0 00
Q ss_pred Ccc------c-----------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 56 ALV------Q-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 56 ~~v------~-----------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
+.+ . +++...+++|+.++.++++++...+. ..+..+|+++||...+.
T Consensus 76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-~~~~g~iv~isS~~~~~--------------- 139 (248)
T 3asu_A 76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMV-ERNHGHIINIGSTAGSW--------------- 139 (248)
T ss_dssp CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCCEEEEECCGGGTS---------------
T ss_pred CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCceEEEEccchhcc---------------
Confidence 001 1 12345789999998888887764210 01346899999865431
Q ss_pred CccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEe
Q 030483 119 EVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIG 161 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G 161 (176)
+ .+ ....|... +.+.+ + ...|+++.+++|+.|.|
T Consensus 140 --~----~~---~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~g 182 (248)
T 3asu_A 140 --P----YA---GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG 182 (248)
T ss_dssp --C----CT---TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC
T ss_pred --C----CC---CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccccc
Confidence 1 00 11233322 22221 2 35689999999999985
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.02 E-value=4.7e-10 Score=87.41 Aligned_cols=89 Identities=8% Similarity=-0.075 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------C--------C--C------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------F--------P--T------------ 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~--------~--~------------ 55 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+..... . + +
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFA-----AEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHH-----HTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHH
Confidence 356899999999999999999999 79999999999754210 0 0 0
Q ss_pred -----Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 56 -----ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 56 -----~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
+.+ .+++...+++|+.++.++++++...+. ..+..+||++||...
T Consensus 80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~ 145 (252)
T 3h7a_A 80 AHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLML-AHGQGKIFFTGATAS 145 (252)
T ss_dssp HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEEEEGGG
T ss_pred hhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEECCHHH
Confidence 000 112355789999998888877654310 012368999988654
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.8e-10 Score=87.92 Aligned_cols=36 Identities=28% Similarity=0.194 Sum_probs=33.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||+|+||++++++|+ ++|++|++++|+.
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~-----~~G~~V~~~~r~~ 43 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFA-----KGGAKVVIVDRDK 43 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCH
Confidence 46899999999999999999999 7999999999975
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=1.1e-09 Score=86.58 Aligned_cols=130 Identities=12% Similarity=-0.051 Sum_probs=83.2
Q ss_pred CCCCCCCeEEEEcCChH--HHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------CCC-------------------
Q 030483 4 QDQNPKSVALIIGVTGI--SGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFP------------------- 54 (176)
Q Consensus 4 ~~~~~~~~vLVtGatGf--iG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~------------------- 54 (176)
|..+.+|++|||||+|+ ||++++++|+ +.|++|++++|+.... ...
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 95 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMH-----REGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFV 95 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHH-----HTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHH
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHH-----HcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHH
Confidence 33345689999999988 9999999999 7999999999986110 000
Q ss_pred --------CCcc--------c----------Cc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeeccc
Q 030483 55 --------TALV--------Q----------ES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGP 105 (176)
Q Consensus 55 --------~~~v--------~----------~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~ 105 (176)
.+.+ . .+ +...+++|+.++.++++++...+. .+-.+|+++||...+.
T Consensus 96 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~--~~~g~iv~isS~~~~~-- 171 (280)
T 3nrc_A 96 ELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMK--NRNASMVALTYIGAEK-- 171 (280)
T ss_dssp HHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHT--TTTCEEEEEECGGGTS--
T ss_pred HHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCeEEEEecccccc--
Confidence 0000 0 11 234688999999999998876521 1236899998865432
Q ss_pred ccCCCccCCCCCCCccccCCCCCCCCCcchHHH----HHHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 106 IFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 106 ~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ . +....|... +.+. .+ ...++++.+++|+.|..+..
T Consensus 172 ---------------~----~---~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 217 (280)
T 3nrc_A 172 ---------------A----M---PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAA 217 (280)
T ss_dssp ---------------C----C---TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGG
T ss_pred ---------------C----C---CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhh
Confidence 0 0 111233322 2222 12 35689999999999987643
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.02 E-value=2.3e-10 Score=90.56 Aligned_cols=36 Identities=19% Similarity=0.113 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 27 ~~k~vlITGasggIG~~la~~l~-----~~G~~V~~~~r~~ 62 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLA-----KMGAHVVVTARSK 62 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 46899999999999999999999 7899999999874
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.02 E-value=7.7e-10 Score=86.10 Aligned_cols=37 Identities=27% Similarity=0.337 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~-----~~G~~V~~~~r~~ 41 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLA-----TDGYRVVLIARSK 41 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHH-----HHTCEEEEEESCH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 456899999999999999999999 7999999999874
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=2.1e-09 Score=83.91 Aligned_cols=125 Identities=12% Similarity=-0.044 Sum_probs=82.2
Q ss_pred CCCCeEEEEcCChH--HHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CC--C---------C---------
Q 030483 7 NPKSVALIIGVTGI--SGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WF--P---------T--------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGf--iG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~--~---------~--------- 55 (176)
+.+|++|||||+|+ ||++++++|+ +.|++|++++|+.... .. . +
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLH-----EAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHH-----HTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHH-----HCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHH
Confidence 45689999999999 9999999999 7999999998874210 00 0 0
Q ss_pred ---------Ccc-------c-------------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccc
Q 030483 56 ---------ALV-------Q-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPI 106 (176)
Q Consensus 56 ---------~~v-------~-------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~ 106 (176)
+.+ . +.+...+++|+.++.++++++...+ .+-.+|+++||...+.
T Consensus 80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~g~iv~isS~~~~~--- 153 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMM---TEGGSIVTLTYLGGEL--- 153 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC---TTCEEEEEEECGGGTS---
T ss_pred HHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhc---CCCceEEEEecccccc---
Confidence 000 1 1123568899999999999998763 1235899998865432
Q ss_pred cCCCccCCCCCCCccccCCCCCCCCCcchHHH----HHHH----Hh-hCCCceEEEeccCceEeCC
Q 030483 107 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVS----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 107 ~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ . +....|... +.+. .+ ...|+++.+++|+.|..+.
T Consensus 154 --------------~----~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (266)
T 3oig_A 154 --------------V----M---PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLS 198 (266)
T ss_dssp --------------C----C---TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGG
T ss_pred --------------c----C---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccc
Confidence 1 0 111223322 1111 12 3568999999999998754
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.9e-09 Score=84.87 Aligned_cols=90 Identities=12% Similarity=-0.023 Sum_probs=64.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC---------------C--------C--------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF---------------P--------T-------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~---------------~--------~-------- 55 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+...... . +
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 78 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAA-----RDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVR 78 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 457899999999999999999999 799999999998643100 0 0
Q ss_pred -------------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 56 -------------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 56 -------------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
+.+ .++++..+++|+.++.++.+++...+. ..+..+|+++||...+
T Consensus 79 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~iv~isS~~~~ 153 (274)
T 3e03_A 79 AAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLL-QAPNPHILTLAPPPSL 153 (274)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHT-TSSSCEEEECCCCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHH-hcCCceEEEECChHhc
Confidence 000 112355788999999988888765421 1134689999886544
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.01 E-value=2.5e-09 Score=84.62 Aligned_cols=37 Identities=16% Similarity=0.190 Sum_probs=33.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~-----~~G~~V~~~~r~~ 57 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLH-----QTGYRVVIHYHNS 57 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHH-----HHTCEEEEEESSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCeEEEEeCCc
Confidence 356899999999999999999999 7999999999986
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=2.8e-10 Score=96.93 Aligned_cols=122 Identities=16% Similarity=0.060 Sum_probs=80.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecCCCCCC------------C-C-------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPGW------------F-P------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~~~------------~-~------------------- 54 (176)
.++++|||||+|+||.+++++|+ ++|++ |+.++|+..... . .
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La-----~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~ 299 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLA-----RRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLG 299 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHH-----HHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHH
Confidence 45899999999999999999999 68885 899999753100 0 0
Q ss_pred -C------Ccc-------------c---CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee-cccccCCC
Q 030483 55 -T------ALV-------------Q---ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY-MGPIFDPS 110 (176)
Q Consensus 55 -~------~~v-------------~---~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y-g~~~~d~~ 110 (176)
. +.| . +.....+++|+.++.++.+++... ++.+||++||...+ |.+
T Consensus 300 ~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-----~~~~~V~~SS~a~~~g~~----- 369 (486)
T 2fr1_A 300 GIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-----DLTAFVLFSSFASAFGAP----- 369 (486)
T ss_dssp TSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-----CCSEEEEEEEHHHHTCCT-----
T ss_pred HHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-----CCCEEEEEcChHhcCCCC-----
Confidence 0 000 0 122346788999999999998776 57899999986443 211
Q ss_pred ccCCCCCCCccccCCCCCCCCCcchHHH----HHHHHh-hCCCceEEEeccCceEeCCC
Q 030483 111 LAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSAS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 111 ~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
....|... +.+..+ +..|+++++++|+.+.++++
T Consensus 370 --------------------g~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm 408 (486)
T 2fr1_A 370 --------------------GLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGM 408 (486)
T ss_dssp --------------------TCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC----
T ss_pred --------------------CCHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcc
Confidence 01123222 222222 45689999999999988754
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.00 E-value=6.4e-10 Score=86.63 Aligned_cols=126 Identities=13% Similarity=-0.011 Sum_probs=79.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---C-C---------CC-----------------Cc
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W-F---------PT-----------------AL 57 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~-~---------~~-----------------~~ 57 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.... . . .+ +.
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~ 82 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLL-----DAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRI 82 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHH-----HHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCE
Confidence 46899999999999999999999 7999999999864210 0 0 00 00
Q ss_pred c--------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCC-------CCccEEEEeccceeecccccCCC
Q 030483 58 V--------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGR-------SRLRHVALLTGTKHYMGPIFDPS 110 (176)
Q Consensus 58 v--------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~-------~~v~~vv~~Ss~~~yg~~~~d~~ 110 (176)
+ .+++++.+++|+.++.++++++...+... .+-.+|+++||...+..
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------ 156 (257)
T 3tl3_A 83 VVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG------ 156 (257)
T ss_dssp EEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC------
T ss_pred EEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC------
Confidence 0 01235578999999999988887652110 12357999988655421
Q ss_pred ccCCCCCCCccccCCCCCCCCCcchHHHHHH-----H----Hh-hCCCceEEEeccCceEeCC
Q 030483 111 LAGQLMPYEVPFKEDSSRLPFPNFYYELEDV-----S----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 111 ~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~-----~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
.| ....|...|. . .| ...++++..++|+.|..+.
T Consensus 157 ---------~~----------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 200 (257)
T 3tl3_A 157 ---------QI----------GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPL 200 (257)
T ss_dssp ---------HH----------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred ---------CC----------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChh
Confidence 00 1112332221 1 12 3568999999999997764
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=98.99 E-value=1e-09 Score=88.84 Aligned_cols=125 Identities=17% Similarity=0.163 Sum_probs=77.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------------CCC------------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------------WFP------------------ 54 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------------~~~------------------ 54 (176)
+|++|||||+|+||++++++|+ +.|++|+.+.|+.... ...
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~-----~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 76 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLA-----SDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAAR 76 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHH-----TCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----HCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHH
Confidence 4789999999999999999999 7999988876642210 000
Q ss_pred -------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCc
Q 030483 55 -------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 55 -------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
.+.+ .+++...+++|+.++.++++++...+. ..+..+||++||...+..
T Consensus 77 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~-~~~~g~IV~isS~~~~~~------- 148 (327)
T 1jtv_A 77 ERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMK-RRGSGRVLVTGSVGGLMG------- 148 (327)
T ss_dssp HTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEEEEGGGTSC-------
T ss_pred HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEECCcccccC-------
Confidence 0000 012345789999999998888643210 013578999998654320
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. + ....|... +.+.+ + ...|+++.+++|+.|..+-
T Consensus 149 --------~------~---~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 149 --------L------P---FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp --------C------T---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred --------C------C---CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 0 1 11233322 22222 1 3568999999999997654
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=98.98 E-value=4.7e-09 Score=81.58 Aligned_cols=89 Identities=12% Similarity=-0.031 Sum_probs=62.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC--------------C------CC--CC----------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--------------G------WF--PT---------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--------------~------~~--~~---------- 55 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+... . .. .+
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYA-----RYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHH
Confidence 56899999999999999999999 799999999987421 0 00 00
Q ss_pred --------Ccc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 56 --------ALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 56 --------~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
+.+ .++++..+++|+.++.++++++...+. ..+..+||++||...+
T Consensus 86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~-~~~~g~iv~isS~~~~ 156 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLL-KSDAGSLVFTSSSVGR 156 (252)
T ss_dssp HHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-TSSSCEEEEECCGGGT
T ss_pred HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-HCCCCEEEEECChhhc
Confidence 000 112356789999999988888754321 1134689999886543
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.98 E-value=5.3e-10 Score=87.09 Aligned_cols=127 Identities=13% Similarity=0.067 Sum_probs=79.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCC--CcEEEEEecCCCCC----------------CCC---------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPPG----------------WFP--------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~~----------------~~~--------------- 54 (176)
|+|++|||||+|+||++++++|+ +. |+.|+.++|+.... ...
T Consensus 1 Mgk~~lVTGas~GIG~aia~~l~-----~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (254)
T 3kzv_A 1 MGKVILVTGVSRGIGKSIVDVLF-----SLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKG 75 (254)
T ss_dssp -CCEEEECSTTSHHHHHHHHHHH-----HHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----hcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 56899999999999999999998 44 57898888874310 000
Q ss_pred ---CCcc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 55 ---TALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 55 ---~~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
.+.+ .+++...+++|+.++.++++++...+. ..+ .+|+++||...+.
T Consensus 76 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~-~~~-g~iv~isS~~~~~----------- 142 (254)
T 3kzv_A 76 HGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELK-KTN-GNVVFVSSDACNM----------- 142 (254)
T ss_dssp HSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHT-CEEEEECCSCCCC-----------
T ss_pred cCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcC-CeEEEEcCchhcc-----------
Confidence 0000 112356789999999988888744310 002 5899999865442
Q ss_pred CCCCCccccCCCCCCCCCcchHHH----HHHHHh---hCCCceEEEeccCceEeCCCC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYEL----EDVSAS---YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~~---~~~g~~~~ivRp~~v~G~~~~ 165 (176)
+ . +....|... +.+.+. ...++++..++|+.|..+...
T Consensus 143 ------~----~---~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~ 187 (254)
T 3kzv_A 143 ------Y----F---SSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQV 187 (254)
T ss_dssp ------S----S---CCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSC
T ss_pred ------C----C---CCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHH
Confidence 1 0 011233322 222221 236899999999999887543
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=5.5e-10 Score=88.98 Aligned_cols=124 Identities=11% Similarity=-0.062 Sum_probs=81.0
Q ss_pred CCCeEEEEcCChH--HHHHHHHHhhCCCCCCCCcEEEEEecCCCC------------C------CCC-------------
Q 030483 8 PKSVALIIGVTGI--SGLSLAEALKNPTTPGSPWKVYGAARRPPP------------G------WFP------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGf--iG~~l~~~L~~~~~~~~g~~V~~l~R~~~~------------~------~~~------------- 54 (176)
.+|++|||||+|+ ||++++++|+ +.|++|++++|+... . ...
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAR-----EAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHH-----HTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence 4689999999999 9999999999 799999999887320 0 000
Q ss_pred -----CCcc------c--------------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCC
Q 030483 55 -----TALV------Q--------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 109 (176)
Q Consensus 55 -----~~~v------~--------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~ 109 (176)
.+.+ . +++...+++|+.++.++++++...+. +-.+||++||...+..
T Consensus 105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~---~~g~Iv~isS~~~~~~----- 176 (293)
T 3grk_A 105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMA---DGGSILTLTYYGAEKV----- 176 (293)
T ss_dssp HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTT---TCEEEEEEECGGGTSB-----
T ss_pred HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCEEEEEeehhhccC-----
Confidence 0000 1 12345789999999999999887621 2358999988654421
Q ss_pred CccCCCCCCCccccCCCCCCCCCcchHHH----HHHH----Hh-hCCCceEEEeccCceEeCC
Q 030483 110 SLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVS----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 110 ~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
.+ ....|... +.+. .+ ...|+++.+++|+.|..+.
T Consensus 177 ----------------~~---~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 220 (293)
T 3grk_A 177 ----------------MP---NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLA 220 (293)
T ss_dssp ----------------CT---TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred ----------------CC---chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchh
Confidence 00 11223322 2111 12 3568999999999998764
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=6.7e-10 Score=85.18 Aligned_cols=35 Identities=29% Similarity=0.283 Sum_probs=32.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+|++|||||+|+||++++++|+ ++|++|+.++|+.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~-----~~G~~V~~~~r~~ 36 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALA-----RDGYALALGARSV 36 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 4789999999999999999999 7999999999874
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=3.5e-09 Score=83.37 Aligned_cols=88 Identities=17% Similarity=0.036 Sum_probs=61.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCC------C---------------------Ccc-
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP------T---------------------ALV- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~------~---------------------~~v- 58 (176)
..+|++|||||++-||++++++|+ +.|++|+..+|+......+ + +.+
T Consensus 9 L~GK~alVTGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV 83 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFL-----ELGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIV 83 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHH-----HTTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred CCCCEEEEeccCcHHHHHHHHHHH-----HcCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 457999999999999999999999 7999999999976542110 0 000
Q ss_pred -----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 59 -----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 59 -----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
.++++..+++|+.++.++.+++...+. ..+-.+||.+||..
T Consensus 84 nnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~-~~~~G~Iv~isS~~ 141 (261)
T 4h15_A 84 HMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMV-ARGSGVVVHVTSIQ 141 (261)
T ss_dssp ECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGG
T ss_pred ECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhh-hcCCceEEEEEehh
Confidence 123456789999987766666554321 01235788888754
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.96 E-value=3.9e-09 Score=85.03 Aligned_cols=35 Identities=20% Similarity=0.127 Sum_probs=32.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la-----~~G~~Vv~~~r~ 60 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFA-----AEGARVVVNDIG 60 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCc
Confidence 46889999999999999999999 799999999886
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.96 E-value=9.8e-10 Score=87.11 Aligned_cols=36 Identities=17% Similarity=0.190 Sum_probs=32.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||+|+||++++++|+ ++|++|++++|+.
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~-----~~G~~V~~~~r~~ 46 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLS-----SNGIMVVLTCRDV 46 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCcEEEEecCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 36789999999999999999999 7999999999874
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.96 E-value=8.2e-10 Score=85.54 Aligned_cols=126 Identities=11% Similarity=-0.002 Sum_probs=80.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------------------CCC------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------------------WFP------------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------------------~~~------------ 54 (176)
+.+|++|||||+|+||++++++|+ +.|+.|+.+.++.... ...
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLA-----NDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSL 79 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHH-----HCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHH
Confidence 346899999999999999999999 7999998865433210 000
Q ss_pred ------------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccc
Q 030483 55 ------------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPI 106 (176)
Q Consensus 55 ------------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~ 106 (176)
.+.+ .+.++..+++|+.++.++++++...+ .+-.+|+++||...+..
T Consensus 80 ~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~~~iv~isS~~~~~~-- 154 (255)
T 3icc_A 80 DNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRL---RDNSRIINISSAATRIS-- 154 (255)
T ss_dssp HHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTE---EEEEEEEEECCGGGTSC--
T ss_pred HHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhh---CCCCEEEEeCChhhccC--
Confidence 0000 11234568899999999999987652 12357999988654320
Q ss_pred cCCCccCCCCCCCccccCCCCCCCCCcchHHH----HHHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 107 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 107 ~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. +....|... +.+. .+ ...++++..++|+.|..+..
T Consensus 155 -------------------~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 199 (255)
T 3icc_A 155 -------------------L---PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMN 199 (255)
T ss_dssp -------------------C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSS
T ss_pred -------------------C---CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccch
Confidence 0 011223222 1111 12 35689999999999987654
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.95 E-value=2.9e-09 Score=83.01 Aligned_cols=124 Identities=9% Similarity=-0.116 Sum_probs=78.8
Q ss_pred CCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CCC---------C------------
Q 030483 8 PKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WFP---------T------------ 55 (176)
Q Consensus 8 ~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~---------~------------ 55 (176)
.+|++|||||+ |+||++++++|+ +.|++|++++|+.... ... +
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACK-----REGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHH-----HTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHH-----HcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHH
Confidence 57899999999 999999999999 7999999998873210 000 0
Q ss_pred ------Ccc--------c----------Cc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccC
Q 030483 56 ------ALV--------Q----------ES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 108 (176)
Q Consensus 56 ------~~v--------~----------~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d 108 (176)
+.+ . .+ +...+++|+.++.++++++...+ .+-.+|+++||...+.
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~g~iv~isS~~~~~----- 159 (271)
T 3ek2_A 88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPML---SDDASLLTLSYLGAER----- 159 (271)
T ss_dssp HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGE---EEEEEEEEEECGGGTS-----
T ss_pred HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHh---ccCceEEEEecccccc-----
Confidence 000 1 11 23468899999999999987752 1235788888865432
Q ss_pred CCccCCCCCCCccccCCCCCCCCCcchHHH----HHHH----Hh-hCCCceEEEeccCceEeCC
Q 030483 109 PSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVS----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 109 ~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ .+ ....|... +.+. .+ ...++++.+++|+.|..+.
T Consensus 160 ------------~----~~---~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 204 (271)
T 3ek2_A 160 ------------A----IP---NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLA 204 (271)
T ss_dssp ------------B----CT---TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC----
T ss_pred ------------C----CC---CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchh
Confidence 1 00 11223322 2111 12 4678999999999998764
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.3e-09 Score=85.01 Aligned_cols=37 Identities=22% Similarity=0.173 Sum_probs=33.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~ 39 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLC-----KAGATVYITGRHL 39 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 567899999999999999999999 7999999999864
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.3e-09 Score=82.95 Aligned_cols=125 Identities=11% Similarity=0.034 Sum_probs=78.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE-e--cCCCC--------------CCCC--------------CCc
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-A--RRPPP--------------GWFP--------------TAL 57 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~--R~~~~--------------~~~~--------------~~~ 57 (176)
+|++|||||+|+||++++++|+ ++|++|+++ + |+... .... .+.
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~ 75 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALT-----QDGYTVVCHDASFADAAERQRFESENPGTIALAEQKPERLVDATLQHGEAIDT 75 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHH-----HTTCEEEECCGGGGSHHHHHHHHHHSTTEEECCCCCGGGHHHHHGGGSSCEEE
T ss_pred CCEEEEECCCChHHHHHHHHHH-----HCCCEEEEecCCcCCHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHcCCCCE
Confidence 3689999999999999999999 799999999 6 76321 0000 000
Q ss_pred c--------c---C--------cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 58 V--------Q---E--------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 58 v--------~---~--------~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
+ . . +++..+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-~~~~g~iv~isS~~~~~~-------------- 140 (244)
T 1zmo_A 76 IVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLR-AAGGASVIFITSSVGKKP-------------- 140 (244)
T ss_dssp EEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTTCEEEEEECCGGGTSC--------------
T ss_pred EEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEECChhhCCC--------------
Confidence 0 1 1 2345789999999888888764311 013478999998655421
Q ss_pred CccccCCCCCCCCCcchHHH----HHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 119 EVPFKEDSSRLPFPNFYYEL----EDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~~----e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
. + ....|... +.+.+ + ...++++.+++|+.|-.+-
T Consensus 141 -~------~---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 184 (244)
T 1zmo_A 141 -L------A---YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPT 184 (244)
T ss_dssp -C------T---TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTT
T ss_pred -C------C---CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCc
Confidence 0 0 11223322 22221 2 3568999999999886553
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=5.5e-09 Score=84.33 Aligned_cols=35 Identities=23% Similarity=0.074 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La-----~~Ga~Vv~~~~ 41 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFA-----ERGALVVVNDL 41 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEcC
Confidence 567899999999999999999999 79999998765
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.92 E-value=9.9e-10 Score=87.38 Aligned_cols=125 Identities=16% Similarity=0.089 Sum_probs=79.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc---EEEEEecCCCC-------------C----------CCC-------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW---KVYGAARRPPP-------------G----------WFP------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~---~V~~l~R~~~~-------------~----------~~~------- 54 (176)
.+|++|||||+|+||++++++|+ +.|+ .|+.++|+... . ...
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~-----~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~ 106 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYL-----EASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFI 106 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHH
T ss_pred CCCEEEEecCCChHHHHHHHHHH-----HcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHH
Confidence 46899999999999999999999 6777 89999886421 0 000
Q ss_pred ---------CCcc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccC
Q 030483 55 ---------TALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 108 (176)
Q Consensus 55 ---------~~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d 108 (176)
.+.+ .+++++.+++|+.++.++++++...+. ..+..+||++||...+.
T Consensus 107 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~IV~isS~~~~~----- 180 (287)
T 3rku_A 107 ENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQ-AKNSGDIVNLGSIAGRD----- 180 (287)
T ss_dssp HTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCCEEEEECCGGGTS-----
T ss_pred HHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCeEEEECChhhcC-----
Confidence 0000 112456789999999888888753210 01346899998865431
Q ss_pred CCccCCCCCCCccccCCCCCCCCCcchHHH----HHHH----Hh-hCCCceEEEeccCceEeC
Q 030483 109 PSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVS----AS-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 109 ~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~----~~-~~~g~~~~ivRp~~v~G~ 162 (176)
+ . +....|... +.+. .| ...|+++.+++|+.|..+
T Consensus 181 ------------~----~---~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~ 224 (287)
T 3rku_A 181 ------------A----Y---PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETE 224 (287)
T ss_dssp ------------C----C---TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESS
T ss_pred ------------C----C---CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCc
Confidence 0 0 011233332 2121 12 357899999999999876
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.91 E-value=9.6e-10 Score=87.09 Aligned_cols=36 Identities=31% Similarity=0.401 Sum_probs=32.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~ 67 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALS-----AEGYSVVITGRRP 67 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 46899999999999999999999 7999999999875
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=2.9e-09 Score=90.97 Aligned_cols=124 Identities=15% Similarity=-0.002 Sum_probs=83.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCCCC------------C-C---------C--------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW------------F-P---------T-------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~------------~-~---------~-------- 55 (176)
.+++++|||||+|+||.+++++|. +.|+ .|+.++|+..+.. . . +
T Consensus 237 ~~~~~vLITGgsgGIG~alA~~La-----~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~ 311 (496)
T 3mje_A 237 PVHGSVLVTGGTGGIGGRVARRLA-----EQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALL 311 (496)
T ss_dssp CCCSEEEEETCSSHHHHHHHHHHH-----HTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEECCCCchHHHHHHHHH-----HCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 356899999999999999999999 6888 6888888642210 0 0 0
Q ss_pred ---------Ccc------c-----------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCC
Q 030483 56 ---------ALV------Q-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 109 (176)
Q Consensus 56 ---------~~v------~-----------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~ 109 (176)
+.+ . +.....+++|+.++.++.+++... ...+||++||...+-
T Consensus 312 ~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-----~~~~iV~~SS~a~~~------ 380 (496)
T 3mje_A 312 AELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-----DLDAFVLFSSGAAVW------ 380 (496)
T ss_dssp HTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-----CCSEEEEEEEHHHHT------
T ss_pred HHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-----CCCEEEEEeChHhcC------
Confidence 000 1 123457899999999999998876 467899988864431
Q ss_pred CccCCCCCCCccccCCCCCCCCCcchHHHHHHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 110 SLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 110 ~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
| . +....|...+..+ ++ +..|++++++.|+.+.+.++
T Consensus 381 ---g------~---------~g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm 422 (496)
T 3mje_A 381 ---G------S---------GGQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGM 422 (496)
T ss_dssp ---T------C---------TTCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC
T ss_pred ---C------C---------CCcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCcc
Confidence 1 0 0112343332222 22 46799999999998876654
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.88 E-value=9.4e-09 Score=83.15 Aligned_cols=35 Identities=31% Similarity=0.345 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe-cC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA-RR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~-R~ 47 (176)
.+|++|||||+|+||++++++|+ +.|++|++++ |+
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La-----~~G~~Vv~~~~r~ 80 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLH-----AEGYAVCLHYHRS 80 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEcCCC
Confidence 45889999999999999999999 7999999998 65
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=98.88 E-value=1.4e-08 Score=79.15 Aligned_cols=37 Identities=14% Similarity=0.030 Sum_probs=33.2
Q ss_pred CCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+|++|||||+ |+||++++++|+ +.|++|+.++|+..
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~-----~~G~~v~~~~~~~~ 57 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCA-----EMGAAVAITYASRA 57 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHH-----HTSCEEEECBSSSS
T ss_pred CCCEEEEECCCCCCChHHHHHHHHH-----HCCCeEEEEeCCcc
Confidence 46899999999 899999999999 79999999988754
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=7.2e-09 Score=81.91 Aligned_cols=37 Identities=22% Similarity=0.151 Sum_probs=33.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~ 39 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFV-----AEGARVAVLDKSA 39 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHH-----HCcCEEEEEeCCH
Confidence 457899999999999999999999 7999999999874
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=98.84 E-value=5.7e-09 Score=89.42 Aligned_cols=119 Identities=16% Similarity=0.098 Sum_probs=78.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCCCC-----------CC---------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-----------FP--------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~-----------~~--------------------- 54 (176)
.++++|||||+|+||.+++++|. +.|+ .|+.++|+..... ..
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La-----~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~ 332 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLA-----AEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVT 332 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHH-----HTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----hCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHh
Confidence 45899999999999999999999 6898 5888888753100 00
Q ss_pred ---CCcc-------------c---CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee-ecccccCCCccCC
Q 030483 55 ---TALV-------------Q---ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH-YMGPIFDPSLAGQ 114 (176)
Q Consensus 55 ---~~~v-------------~---~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~-yg~~~~d~~~~g~ 114 (176)
.+.| . +.....+++|+.++.++.+++... .++.+||++||... ||.+
T Consensus 333 ~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~----~~~~~~V~~SS~a~~~g~~--------- 399 (511)
T 2z5l_A 333 AYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI----KGLDAFVLFSSVTGTWGNA--------- 399 (511)
T ss_dssp HSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC----TTCCCEEEEEEGGGTTCCT---------
T ss_pred cCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEEEeCHHhcCCCC---------
Confidence 0001 0 122456789999999999887643 14678999988643 2210
Q ss_pred CCCCCccccCCCCCCCCCcchHHH----HHHHHh-hCCCceEEEeccCceE
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYEL----EDVSAS-YSPAITYSVHRSSVII 160 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~~-~~~g~~~~ivRp~~v~ 160 (176)
....|... +.+..+ +..|+++++++|+.+-
T Consensus 400 ----------------g~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~ 434 (511)
T 2z5l_A 400 ----------------GQGAYAAANAALDALAERRRAAGLPATSVAWGLWG 434 (511)
T ss_dssp ----------------TBHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBC
T ss_pred ----------------CCHHHHHHHHHHHHHHHHHHHcCCcEEEEECCccc
Confidence 11233332 222222 4679999999998773
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=2.2e-08 Score=79.48 Aligned_cols=38 Identities=29% Similarity=0.309 Sum_probs=32.5
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe-cC
Q 030483 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA-RR 47 (176)
Q Consensus 5 ~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~-R~ 47 (176)
..+.+|++|||||+|+||++++++|+ +.|++|++++ |+
T Consensus 5 ~~l~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~~r~ 43 (291)
T 1e7w_A 5 TAPTVPVALVTGAAKRLGRSIAEGLH-----AEGYAVCLHYHRS 43 (291)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSC
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEcCCC
Confidence 33557899999999999999999999 7999999999 75
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.77 E-value=3.1e-08 Score=77.53 Aligned_cols=37 Identities=8% Similarity=0.014 Sum_probs=33.6
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++||||| +|+||++++++|+ +.|++|++++|+.
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~-----~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQ-----EQGAQLVLTGFDR 43 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHH-----HTTCEEEEEECSC
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHH-----HCCCEEEEEecCh
Confidence 45689999999 9999999999999 7999999999875
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=7e-08 Score=75.00 Aligned_cols=91 Identities=14% Similarity=0.004 Sum_probs=63.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCC---CCcEEEEEecCCCC-------------C----------CC-------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPG---SPWKVYGAARRPPP-------------G----------WF------- 53 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~---~g~~V~~l~R~~~~-------------~----------~~------- 53 (176)
+.+|++|||||+|+||++++++|+ + .|++|++++|+... . ..
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~-----~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~ 78 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLA-----RLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRL 78 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHH-----TTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHH-----HhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHH
Confidence 456899999999999999999999 6 79999999986310 0 00
Q ss_pred -----------CCC--cc--------c--------Cc---HHHHHHHHHHHHHHHHHHHHhcCCCC-CCccEEEEeccce
Q 030483 54 -----------PTA--LV--------Q--------ES---EEVNIFKNSTMLKNVLSVLVSSNSGR-SRLRHVALLTGTK 100 (176)
Q Consensus 54 -----------~~~--~v--------~--------~~---~~~~~~~N~~~t~~ll~a~~~~~~~~-~~v~~vv~~Ss~~ 100 (176)
..+ .+ . .+ +...+++|+.++.++++++...+... .+..+|+++||..
T Consensus 79 ~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~ 158 (259)
T 1oaa_A 79 LSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC 158 (259)
T ss_dssp HHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGG
T ss_pred HHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCch
Confidence 001 21 1 12 23468899999999999988763211 0246799999865
Q ss_pred ee
Q 030483 101 HY 102 (176)
Q Consensus 101 ~y 102 (176)
.+
T Consensus 159 ~~ 160 (259)
T 1oaa_A 159 AL 160 (259)
T ss_dssp GT
T ss_pred hc
Confidence 43
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.71 E-value=4.5e-08 Score=84.11 Aligned_cols=123 Identities=11% Similarity=-0.008 Sum_probs=78.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEE-ecCCCC----------CCC-----------C----------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGA-ARRPPP----------GWF-----------P---------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l-~R~~~~----------~~~-----------~---------- 54 (176)
.++++|||||+|.||.+++++|. +.|+. |+.+ +|+..+ ... .
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La-----~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv 324 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLA-----RDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDL 324 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHH-----HHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCT
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-----HcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCC
Confidence 45899999999999999999999 68888 5555 787432 000 0
Q ss_pred -C-----------------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 55 -T-----------------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 55 -~-----------------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
+ +.| .++....+++|+.++.++.+++...+.......+||++||..
T Consensus 325 td~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a 404 (525)
T 3qp9_A 325 TDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVA 404 (525)
T ss_dssp TSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGG
T ss_pred CCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHH
Confidence 0 000 112345789999999999999988621010167899998865
Q ss_pred eecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHH----Hh-hCCCceEEEeccCce
Q 030483 101 HYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVS----AS-YSPAITYSVHRSSVI 159 (176)
Q Consensus 101 ~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~----~~-~~~g~~~~ivRp~~v 159 (176)
.+. | . +....|......+ .+ +..|++++++.|+.+
T Consensus 405 ~~~---------g------------~---~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~ 444 (525)
T 3qp9_A 405 AIW---------G------------G---AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW 444 (525)
T ss_dssp GTT---------C------------C---TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB
T ss_pred HcC---------C------------C---CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence 431 1 0 0112343333222 22 466899999999988
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=4.8e-08 Score=77.47 Aligned_cols=35 Identities=17% Similarity=0.183 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 7 ~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
+.+|++|||||+ |+||++++++|+ +.|++|++++|
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la-----~~G~~V~~~~r 42 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLA-----AAGAEILVGTW 42 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHH-----HTTCEEEEEEE
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHH-----HCCCeEEEeec
Confidence 456899999999 999999999999 79999998864
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=98.69 E-value=3.8e-08 Score=83.12 Aligned_cols=126 Identities=14% Similarity=0.061 Sum_probs=82.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------------CCC---------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------------WFP--------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------------~~~--------------- 54 (176)
.++++|||||+|.||.+++++|. +.|++|+.++|+.... ...
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La-----~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g 286 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFA-----RDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHG 286 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred CCCEEEEeCCchHHHHHHHHHHH-----HCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence 56899999999999999999999 6899999998853210 000
Q ss_pred --CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCC
Q 030483 55 --TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 116 (176)
Q Consensus 55 --~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~ 116 (176)
.+.+ .+.++..+++|+.++.++.+++...+. ..+..+||++||...+.+.
T Consensus 287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~-~~~~g~iV~iSS~a~~~g~----------- 354 (454)
T 3u0b_A 287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGT-IGEGGRVIGLSSMAGIAGN----------- 354 (454)
T ss_dssp TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTS-SCTTCEEEEECCHHHHHCC-----------
T ss_pred CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCCEEEEEeChHhCCCC-----------
Confidence 0111 113356789999999999999886521 1135689999986543210
Q ss_pred CCCccccCCCCCCCCCcchHHHHH----HH----Hh-hCCCceEEEeccCceEeCC
Q 030483 117 PYEVPFKEDSSRLPFPNFYYELED----VS----AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 117 ~~~~p~~E~~~~~~~~~~y~~~e~----~~----~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ ....|...+. +. .+ ...|+++.++.|+.|..+.
T Consensus 355 ----------~---g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 397 (454)
T 3u0b_A 355 ----------R---GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKM 397 (454)
T ss_dssp ----------T---TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--
T ss_pred ----------C---CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChh
Confidence 0 1123332221 11 12 4678999999999997664
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=5.3e-08 Score=76.07 Aligned_cols=87 Identities=7% Similarity=-0.082 Sum_probs=60.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CCC---------C-----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WFP---------T----------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~---------~----------------- 55 (176)
|+|+||||||++-||++++++|+ +.|++|...+|+.... ... +
T Consensus 1 MnK~vlVTGas~GIG~aia~~la-----~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~ 75 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFL-----EAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999999999 7999999999874320 000 0
Q ss_pred -Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 56 -ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 56 -~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
+.+ .++++..+++|+.++-.+.+++...+... + .+++.+||...
T Consensus 76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~-G~IInisS~~~ 136 (247)
T 3ged_A 76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-K-GRIINIASTRA 136 (247)
T ss_dssp CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-T-CEEEEECCGGG
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-C-CcEEEEeeccc
Confidence 000 22456788999999877777665542101 2 57888887543
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.67 E-value=1.8e-07 Score=72.84 Aligned_cols=124 Identities=10% Similarity=-0.062 Sum_probs=80.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC----C---------C--------------Ccc--
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF----P---------T--------------ALV-- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~----~---------~--------------~~v-- 58 (176)
.+|++|||||++-||++++++|. +.|++|+..+|+...... . + +.+
T Consensus 10 ~GK~alVTGas~GIG~aia~~la-----~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVN 84 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFA-----ELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVN 84 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 58999999999999999999999 799999999997653210 0 0 000
Q ss_pred ------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCC
Q 030483 59 ------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 126 (176)
Q Consensus 59 ------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~ 126 (176)
.++++..+++|+.++-.+.+++...+. . +-.+||.+||...+. + .
T Consensus 85 NAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~-~-~~G~IVnisS~~~~~-----------------~----~ 141 (242)
T 4b79_A 85 NAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLA-Q-RGGSILNIASMYSTF-----------------G----S 141 (242)
T ss_dssp CCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHH-H-HCEEEEEECCGGGTS-----------------C----C
T ss_pred CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-H-cCCeEEEEeeccccC-----------------C----C
Confidence 224567889999988777766655421 0 125899998854321 1 0
Q ss_pred CCCCCCcchHHHH-------HHH-Hh-hCCCceEEEeccCceEeC
Q 030483 127 SRLPFPNFYYELE-------DVS-AS-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 127 ~~~~~~~~y~~~e-------~~~-~~-~~~g~~~~ivRp~~v~G~ 162 (176)
+ ....|...+ +.+ .| ..+|+++-.+-|+.|--|
T Consensus 142 ~---~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~ 183 (242)
T 4b79_A 142 A---DRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTP 183 (242)
T ss_dssp S---SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC
T ss_pred C---CCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCCh
Confidence 1 112343322 111 22 467899999999988654
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.61 E-value=2e-08 Score=78.82 Aligned_cols=40 Identities=15% Similarity=0.072 Sum_probs=35.8
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 3 ~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++ ..+|++|||||++-||++++++|. +.|+.|+.++|+.
T Consensus 2 y~s-L~gKvalVTGas~GIG~aiA~~la-----~~Ga~Vv~~~~~~ 41 (254)
T 4fn4_A 2 YQS-LKNKVVIVTGAGSGIGRAIAKKFA-----LNDSIVVAVELLE 41 (254)
T ss_dssp CGG-GTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCC-CCCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEECCH
Confidence 444 568999999999999999999999 7999999999874
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=1.7e-07 Score=75.12 Aligned_cols=35 Identities=20% Similarity=0.165 Sum_probs=31.5
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 7 ~~~~~vLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
+.+|++||||| +|+||++++++|+ +.|++|++++|
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la-----~~G~~Vv~~~r 43 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLA-----SAGARVALGTW 43 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHH-----TTTCEEEEEEC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHH-----HCCCEEEEEec
Confidence 45689999999 8999999999999 79999999875
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.57 E-value=6.1e-08 Score=76.79 Aligned_cols=124 Identities=15% Similarity=0.042 Sum_probs=81.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CC-------C--C----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WF-------P--T---------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-------~--~---------------- 55 (176)
.+|++|||||++-||++++++|+ +.|++|+..+|+.... .. + +
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la-----~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFV-----AEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999 7999999999974320 00 0 0
Q ss_pred --Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCC
Q 030483 56 --ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 117 (176)
Q Consensus 56 --~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~ 117 (176)
+.+ .++++..+++|+.++-++.+++...+. +-.++|.+||...+.
T Consensus 103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~---~~G~IInisS~~~~~-------------- 165 (273)
T 4fgs_A 103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLA---RGSSVVLTGSTAGST-------------- 165 (273)
T ss_dssp CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEE---EEEEEEEECCGGGGS--------------
T ss_pred CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHh---hCCeEEEEeehhhcc--------------
Confidence 000 234567899999999988888877632 235788887754321
Q ss_pred CCccccCCCCCCCCCcchHHHHH--------HHHh-hCCCceEEEeccCceEeCC
Q 030483 118 YEVPFKEDSSRLPFPNFYYELED--------VSAS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 118 ~~~p~~E~~~~~~~~~~y~~~e~--------~~~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ .| ....|...+. +..| ..+|+++-.+-|+.|--|.
T Consensus 166 ---~----~~---~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~ 210 (273)
T 4fgs_A 166 ---G----TP---AFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTG 210 (273)
T ss_dssp ---C----CT---TCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC--
T ss_pred ---C----CC---CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChh
Confidence 0 01 1123433221 1122 4678999999999886543
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.56 E-value=2.6e-08 Score=78.17 Aligned_cols=37 Identities=24% Similarity=0.207 Sum_probs=33.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..+|++|||||++-||++++++|. +.|++|...+|+.
T Consensus 7 L~gKvalVTGas~GIG~aia~~la-----~~Ga~Vvi~~~~~ 43 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLA-----AAGARVILNDIRA 43 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEECCSCH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 357999999999999999999999 7999999999874
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.54 E-value=2.3e-07 Score=81.02 Aligned_cols=34 Identities=21% Similarity=0.055 Sum_probs=30.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
.+|++|||||+|.||++++++|+ ++|++|++++|
T Consensus 18 ~gk~~lVTGas~GIG~aiA~~La-----~~Ga~Vv~~~r 51 (613)
T 3oml_A 18 DGRVAVVTGAGAGLGREYALLFA-----ERGAKVVVNDL 51 (613)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEC--
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeC
Confidence 46899999999999999999999 79999999887
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=4.9e-07 Score=70.93 Aligned_cols=126 Identities=10% Similarity=0.032 Sum_probs=81.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------CC---------C-------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FP---------T------------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~---------~------------- 55 (176)
..+|++|||||++-||++++++|. +.|+.|+..+|+..... .. +
T Consensus 5 L~gKvalVTGas~GIG~aia~~la-----~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~ 79 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLA-----EERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIA 79 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHH
Confidence 457999999999999999999999 79999999999765310 00 0
Q ss_pred -----Ccc---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 56 -----ALV---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 56 -----~~v---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
+.+ .+++...+++|+.++-++.+++...+... + .+||.+||...+.+
T Consensus 80 ~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~-G~IVnisS~~~~~~----------- 146 (258)
T 4gkb_A 80 TFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-R-GAIVNISSKTAVTG----------- 146 (258)
T ss_dssp HHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCTHHHHC-----------
T ss_pred HhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-C-CeEEEEeehhhccC-----------
Confidence 000 12355678999998877777665442101 2 57999988654310
Q ss_pred CCCCccccCCCCCCCCCcchHHHH-------HHH-Hh-hCCCceEEEeccCceEeCC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYELE-------DVS-AS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~e-------~~~-~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
.+ ....|...+ +.+ .| ..+|+++-.+-|+.|--|.
T Consensus 147 ----------~~---~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~ 190 (258)
T 4gkb_A 147 ----------QG---NTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPL 190 (258)
T ss_dssp ----------CS---SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSC
T ss_pred ----------CC---CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChh
Confidence 00 112343322 111 22 4678999999999886553
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.41 E-value=9.1e-07 Score=69.03 Aligned_cols=89 Identities=19% Similarity=0.076 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------C------------CC-----------CC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------W------------FP-----------TA 56 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~------------~~-----------~~ 56 (176)
..+|++|||||++-||.+++++|. +.|++|...+|+.... . .. .+
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la-----~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iD 81 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLA-----AAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFD 81 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCC
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHH-----HcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCC
Confidence 457999999999999999999999 7999999999875320 0 00 00
Q ss_pred cc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCC-CCCCccEEEEecccee
Q 030483 57 LV----------------QESEEVNIFKNSTMLKNVLSVLVSSNS-GRSRLRHVALLTGTKH 101 (176)
Q Consensus 57 ~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~-~~~~v~~vv~~Ss~~~ 101 (176)
.+ .++++..+++|+.++-.+.+++...+- +. +-.+||.+||...
T Consensus 82 iLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g-~~G~IVnisS~~~ 142 (247)
T 4hp8_A 82 ILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKG-RSGKVVNIASLLS 142 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEECCGGG
T ss_pred EEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CCcEEEEEechhh
Confidence 00 234667899999998777766544310 01 2358999988543
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.39 E-value=6.9e-07 Score=69.64 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=33.5
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..+|++|||||+| -||.+++++|. +.|++|+..+|+..
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la-----~~Ga~Vvi~~r~~~ 43 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLD-----QLGAKLVFTYRKER 43 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHH-----HTTCEEEEEESSGG
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 4579999999876 79999999999 79999999999753
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=98.16 E-value=4.1e-06 Score=67.45 Aligned_cols=34 Identities=18% Similarity=0.221 Sum_probs=29.0
Q ss_pred CCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 9 KSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 9 ~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+|++|||||++ .||.+++++|+ ..|++|+..+|+
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la-----~~G~~Vv~~~~~ 37 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELS-----KRNVKIIFGIWP 37 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHH-----HTTCEEEEEECH
T ss_pred CcEEEEECCCCCCchHHHHHHHHH-----HCCCEEEEEecC
Confidence 57899999874 89999999999 799999966543
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.05 E-value=4.4e-06 Score=56.47 Aligned_cols=36 Identities=25% Similarity=0.253 Sum_probs=31.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~ 49 (176)
++++|+|+|+ |++|+++++.|+ ..| ++|++++|++.
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~-----~~g~~~v~~~~r~~~ 40 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLK-----TSSNYSVTVADHDLA 40 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHH-----HCSSEEEEEEESCHH
T ss_pred CcCeEEEECC-CHHHHHHHHHHH-----hCCCceEEEEeCCHH
Confidence 4578999999 999999999999 678 99999999753
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.03 E-value=2.2e-05 Score=63.43 Aligned_cols=81 Identities=7% Similarity=-0.037 Sum_probs=57.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-------EEEEEecC----CC----------CC-CC-------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARR----PP----------PG-WF------------- 53 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-------~V~~l~R~----~~----------~~-~~------------- 53 (176)
.+||+||||+||||++++..|+ ..|+ +|+.+++. .. +. ..
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~-----~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~ 79 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIA-----NGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMT 79 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHH-----TTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHH
T ss_pred CCEEEEECCCChHHHHHHHHHH-----hCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHH
Confidence 3689999999999999999999 5664 89888876 11 00 00
Q ss_pred ---CCCcc----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCC-CCccEEEEecc
Q 030483 54 ---PTALV----------QESEEVNIFKNSTMLKNVLSVLVSSNSGR-SRLRHVALLTG 98 (176)
Q Consensus 54 ---~~~~v----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~-~~v~~vv~~Ss 98 (176)
+.+.| ..+..+++..|+.+++++++++.+. + +. .+|+++|.
T Consensus 80 al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~---~~p~-a~ii~~SN 134 (329)
T 1b8p_A 80 AFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAV---ASRN-IKVLVVGN 134 (329)
T ss_dssp HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH---SCTT-CEEEECSS
T ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh---cCCC-eEEEEccC
Confidence 00111 1234667899999999999999997 4 32 36777664
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=97.95 E-value=1.5e-05 Score=64.39 Aligned_cols=81 Identities=19% Similarity=0.119 Sum_probs=56.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCC---------CCC-------C----------CCcc-
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPP---------GWF-------P----------TALV- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~---------~~~-------~----------~~~v- 58 (176)
+++||+||||+||+|++++..|+ ..| ++|+.+++.+.. ... . .+.|
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~-----~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi 81 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMK-----MNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLII 81 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHH-----HCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----hCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEE
Confidence 44689999999999999999998 577 889998865420 000 0 0111
Q ss_pred ---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecc
Q 030483 59 ---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 98 (176)
Q Consensus 59 ---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss 98 (176)
..+...+...|+.+++++++++.+. + ++.+++++|
T Consensus 82 ~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~---~--p~~~viv~S 125 (326)
T 1smk_A 82 VPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC---C--PRAIVNLIS 125 (326)
T ss_dssp ECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---C--TTSEEEECC
T ss_pred EcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh---C--CCeEEEEEC
Confidence 1123456889999999999999998 4 345666655
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.89 E-value=5.2e-05 Score=60.60 Aligned_cols=79 Identities=13% Similarity=0.067 Sum_probs=54.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEec--CCCCC-----------C---------C------CCCcc-
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAAR--RPPPG-----------W---------F------PTALV- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R--~~~~~-----------~---------~------~~~~v- 58 (176)
+||+||||+||+|++|+..|+ ..++ ++..+++ ..... . . ..+.|
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~-----~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi 75 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIA-----LRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVV 75 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHH-----hCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEE
Confidence 489999999999999999998 4554 6777777 32100 0 0 00111
Q ss_pred ---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecc
Q 030483 59 ---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 98 (176)
Q Consensus 59 ---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss 98 (176)
..+...++..|+.+++++++++.+. + +..+++++|
T Consensus 76 ~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~---~--p~~~viv~S 119 (303)
T 1o6z_A 76 ITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH---N--DDYISLTTS 119 (303)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT---C--SCCEEEECC
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH---C--CCcEEEEeC
Confidence 1133567899999999999999998 4 355666655
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.89 E-value=8e-06 Score=71.24 Aligned_cols=42 Identities=21% Similarity=0.083 Sum_probs=34.1
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|..++ +.+|++|||||++-||++++++|+ +.|++|++.+|+.
T Consensus 1 m~~~~-l~gkvalVTGas~GIG~a~A~~la-----~~Ga~Vv~~~~~~ 42 (604)
T 2et6_A 1 MSPVD-FKDKVVIITGAGGGLGKYYSLEFA-----KLGAKVVVNDLGG 42 (604)
T ss_dssp -CCCC-CTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEECC--
T ss_pred CCCCC-CCCCEEEEeCCCcHHHHHHHHHHH-----HcCCEEEEEeCCc
Confidence 55444 567899999999999999999999 7999999887753
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=4.9e-05 Score=60.99 Aligned_cols=79 Identities=16% Similarity=0.116 Sum_probs=54.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEec--CCC-------------CCC-CC------C----------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAAR--RPP-------------PGW-FP------T---------- 55 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R--~~~-------------~~~-~~------~---------- 55 (176)
+||+||||+||+|++++..|+ ..+. ++..+++ ... ... .. .
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~-----~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~ga 75 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLA-----KEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDES 75 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----TCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTC
T ss_pred CEEEEECCCChhHHHHHHHHH-----hCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCC
Confidence 489999999999999999999 4554 5777776 321 000 00 0
Q ss_pred Ccc----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 56 ALV----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 56 ~~v----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
+.| ..+...++..|+.+++++++++.+. + +.+++++|-
T Consensus 76 D~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~---~---~~~vlv~SN 123 (313)
T 1hye_A 76 DVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI---C---DTKIFVITN 123 (313)
T ss_dssp SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH---C---CCEEEECSS
T ss_pred CEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh---C---CeEEEEecC
Confidence 111 1234567899999999999999998 3 556666654
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=97.83 E-value=1.8e-05 Score=63.28 Aligned_cols=35 Identities=17% Similarity=0.221 Sum_probs=31.6
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 7 ~~~~~vLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
+.+|++||||| +|+||++++++|+ +.|++|++++|
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la-----~~G~~Vv~~~r 43 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLR-----AAGARVLVGTW 43 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHH-----HTTCEEEEEEC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHH-----HCCCEEEEEec
Confidence 45689999999 8999999999999 79999999875
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.3e-05 Score=71.97 Aligned_cols=120 Identities=14% Similarity=0.119 Sum_probs=76.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCCCC-----------CCC-------C------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-----------FPT-------A------------ 56 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~-----------~~~-------~------------ 56 (176)
+++++|||||+|.||.++++.|.+ +.|+ .|+.++|+..... ... +
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~----~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~ 604 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVI----ERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLA 604 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHH----TSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred cccceeeccCCCCcHHHHHHHHHH----HcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH
Confidence 468999999999999999999982 3788 4888899732110 000 0
Q ss_pred ------cc-------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCc
Q 030483 57 ------LV-------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 57 ------~v-------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
.+ .++++..+++|+.++.++.+++.. .+ +||++||...+.+.
T Consensus 605 ~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~------~l-~iV~~SS~ag~~g~------ 671 (795)
T 3slk_A 605 SIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP------DV-ALVLFSSVSGVLGS------ 671 (795)
T ss_dssp TSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT------TS-EEEEEEETHHHHTC------
T ss_pred HHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh------CC-EEEEEccHHhcCCC------
Confidence 00 123456788999999999988732 34 78888886543210
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHHHHHH----Hh-hCCCceEEEeccCceEeC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVS----AS-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~----~~-~~~g~~~~ivRp~~v~G~ 162 (176)
+.-..|.....++ .+ +..|+++..+-|+.+-.+
T Consensus 672 ------------------~g~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~ 709 (795)
T 3slk_A 672 ------------------GGQGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEH 709 (795)
T ss_dssp ------------------SSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCC
T ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcc
Confidence 0112343332222 22 467999999999877543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.76 E-value=4.8e-05 Score=66.31 Aligned_cols=88 Identities=13% Similarity=-0.012 Sum_probs=59.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------C--------CCC----------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------W--------FPT---------------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~--------~~~---------------- 55 (176)
+.+|++|||||++-||++++++|. ++|++|++.+|+.... . ...
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la-----~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G 394 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFA-----KYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYG 394 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHS
T ss_pred cCCCeEEEECcchHHHHHHHHHHH-----HCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcC
Confidence 346899999999999999999999 7999999888643210 0 000
Q ss_pred --Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 56 --ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 56 --~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
+.+ .++++..+++|+.++.++.+++...+... +-.+||.+||..
T Consensus 395 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IVnisS~a 456 (604)
T 2et6_A 395 TIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK-QFGRIINITSTS 456 (604)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChh
Confidence 000 12345678999999877777765542101 235899998854
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=5.4e-05 Score=59.75 Aligned_cols=37 Identities=24% Similarity=0.236 Sum_probs=33.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|++|++++.+|+ +.|++|+.++|+.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~-----~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLA-----GEGAEVVLCGRKL 153 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESSH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCcCEEEEEECCH
Confidence 456899999999999999999999 6899999998864
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.56 E-value=7.4e-05 Score=57.60 Aligned_cols=37 Identities=19% Similarity=0.189 Sum_probs=33.2
Q ss_pred CCCeEEEEcC----------------ChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+|+|||||| ||.+|.+++++|+ ..|++|+.+.|...
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~-----~~Ga~V~lv~~~~~ 54 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLL-----SAGYEVCLITTKRA 54 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHH-----HTTCEEEEEECTTS
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHH-----HCCCEEEEEeCCcc
Confidence 3689999999 9999999999999 79999999998753
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00011 Score=56.53 Aligned_cols=38 Identities=16% Similarity=0.051 Sum_probs=33.9
Q ss_pred CCCCCeEEEEcC----------------ChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 6 QNPKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 6 ~~~~~~vLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++++||||| ||.+|.+++++|. ..|++|+.++|..
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~-----~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAA-----RRGANVTLVSGPV 58 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHH-----HTTCEEEEEECSC
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHH-----HCCCEEEEEECCc
Confidence 366799999999 7999999999999 7999999988764
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.51 E-value=7.2e-05 Score=52.44 Aligned_cols=35 Identities=20% Similarity=0.324 Sum_probs=31.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+++++|+|+ |.+|+++++.|. +.|++|+++++++.
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~-----~~g~~V~~id~~~~ 40 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELT-----AAGKKVLAVDKSKE 40 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHH-----HTTCCEEEEESCHH
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----HCCCeEEEEECCHH
Confidence 468999998 999999999999 68999999998753
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00014 Score=51.83 Aligned_cols=36 Identities=17% Similarity=0.139 Sum_probs=31.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|.+++++|+|+ |.+|+++++.|. ..|++|++++|++
T Consensus 1 ~~~~~vlI~G~-G~vG~~la~~L~-----~~g~~V~vid~~~ 36 (153)
T 1id1_A 1 HRKDHFIVCGH-SILAINTILQLN-----QRGQNVTVISNLP 36 (153)
T ss_dssp CCCSCEEEECC-SHHHHHHHHHHH-----HTTCCEEEEECCC
T ss_pred CCCCcEEEECC-CHHHHHHHHHHH-----HCCCCEEEEECCC
Confidence 44678999996 999999999999 6899999999974
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00014 Score=50.44 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=30.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++++|+|+ |.+|+.+++.|. ..|++|++++|++
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~-----~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELH-----RMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHH-----HTTCCCEEEESCH
T ss_pred CCcEEEECC-CHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 467999998 999999999999 6889999998864
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00018 Score=71.64 Aligned_cols=86 Identities=17% Similarity=0.024 Sum_probs=59.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecCCCCCC-----------CCC-------C------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPGW-----------FPT-------A------------ 56 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~~~-----------~~~-------~------------ 56 (176)
.++++|||||+|-||.++++.|. +.|+. |+.++|+..... ... +
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la-----~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~ 1957 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLR-----LRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLIT 1957 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHH-----HCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHH
Confidence 46789999999999999999999 68997 777888754310 000 0
Q ss_pred ------cc-------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 57 ------LV-------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 57 ------~v-------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
.+ .+++...+++|+.++.++.+++... .+...+||++||...
T Consensus 1958 ~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~---~~~~g~iV~iSS~ag 2024 (2512)
T 2vz8_A 1958 EATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREA---CPELDYFVIFSSVSC 2024 (2512)
T ss_dssp HHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHH---CTTCCEEEEECCHHH
T ss_pred HHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHh---cccCCEEEEecchhh
Confidence 00 2234456789999999998888765 234578999988543
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00036 Score=52.13 Aligned_cols=34 Identities=26% Similarity=0.246 Sum_probs=31.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|+|+||+|++|+++++.|+ ..|++|++++|++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~-----~~g~~V~~~~r~~ 34 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLA-----TLGHEIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----TTTCEEEEEESSH
T ss_pred CeEEEEcCCCHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 479999999999999999999 6899999999874
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0003 Score=48.62 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=29.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++++|+|+ |++|+.+++.|. ..|++|++++|++
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~-----~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLS-----EKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCH
Confidence 368999987 999999999999 6899999999864
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00044 Score=56.35 Aligned_cols=41 Identities=22% Similarity=0.308 Sum_probs=29.7
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
|.+.. +|+++|.|.||+|.+|+.+++.|.+ ...++|+++.+
T Consensus 1 m~~~~-~M~~kV~IiGAtG~iG~~llr~L~~----~p~~ev~~i~~ 41 (354)
T 1ys4_A 1 MSKGE-KMKIKVGVLGATGSVGQRFVQLLAD----HPMFELTALAA 41 (354)
T ss_dssp -------CCEEEEEETTTSHHHHHHHHHHTT----CSSEEEEEEEE
T ss_pred CCCcc-cccceEEEECcCCHHHHHHHHHHhc----CCCCEEEEEEc
Confidence 66555 5567999999999999999999984 35578888865
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0006 Score=56.90 Aligned_cols=37 Identities=19% Similarity=0.099 Sum_probs=33.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCC-CCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPG-SPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~-~g~~V~~l~R~~~ 49 (176)
.+|++|||||++-||.++++.|. . .|++|++++|+..
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA-----~~~GA~Vv~~~r~~~ 97 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAA-----FGFGADTLGVFFEKP 97 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHH-----HHHCCEEEEEECCCC
T ss_pred CCCEEEEECCChHHHHHHHHHHH-----HhCCCEEEEEeCCch
Confidence 46899999999999999999999 7 8999999988754
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0006 Score=57.37 Aligned_cols=35 Identities=26% Similarity=0.292 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++|+|+| +|++|++++++|+ ..|++|++++|+.
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~-----~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLT-----DSGIKVTVACRTL 36 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHH-----TTTCEEEEEESSH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----hCcCEEEEEECCH
Confidence 457899998 8999999999999 6889999999864
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00097 Score=47.50 Aligned_cols=36 Identities=19% Similarity=0.168 Sum_probs=31.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++++|+|+ |.+|+.+++.|. ..|++|++++|++.
T Consensus 18 ~~~~v~IiG~-G~iG~~la~~L~-----~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGC-GRLGSLIANLAS-----SSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCGG
T ss_pred CCCcEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCHH
Confidence 3578999996 999999999999 68999999998754
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00029 Score=57.05 Aligned_cols=80 Identities=14% Similarity=0.052 Sum_probs=53.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc--E-----EEEEecCCC----C---------CCC----------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--K-----VYGAARRPP----P---------GWF---------------- 53 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~-----V~~l~R~~~----~---------~~~---------------- 53 (176)
+||+||||+|+||++|+..|+ ..+. + ++.+++... . ...
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~-----~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~ 78 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIG-----NGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFK 78 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHH-----TTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTT
T ss_pred eEEEEECCCCHHHHHHHHHHH-----hCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhC
Confidence 589999999999999999998 3443 3 888887431 0 000
Q ss_pred CCCcc----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEec
Q 030483 54 PTALV----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 97 (176)
Q Consensus 54 ~~~~v----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~S 97 (176)
+.+.| ..+...+++.|+..++++++++.+. ++.-.+++.+|
T Consensus 79 daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~---~~~~~~vivvs 129 (333)
T 5mdh_A 79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY---AKKSVKVIVVG 129 (333)
T ss_dssp TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH---SCTTCEEEECS
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEEcC
Confidence 00111 1134567899999999999999998 43312355554
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00098 Score=54.37 Aligned_cols=41 Identities=17% Similarity=0.341 Sum_probs=29.3
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCC------cEEEEEec
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSP------WKVYGAAR 46 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g------~~V~~l~R 46 (176)
|+-...|++++|.|.||||.+|+.|++.|+ +.+ .+++.+.+
T Consensus 1 ~~~~~~M~m~kVaIvGATG~vG~~llr~L~-----~~~~~~~~~~ei~~l~s 47 (352)
T 2nqt_A 1 MQNRQVANATKVAVAGASGYAGGEILRLLL-----GHPAYADGRLRIGALTA 47 (352)
T ss_dssp -----CCSCEEEEEETTTSHHHHHHHHHHH-----TCHHHHTTSEEEEEEEE
T ss_pred CCccccccCCEEEEECCCCHHHHHHHHHHH-----cCCCCCCccEEEEEEEC
Confidence 344444545699999999999999999999 444 57888764
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00096 Score=49.21 Aligned_cols=36 Identities=25% Similarity=0.267 Sum_probs=32.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++||+||+|-||..+++.+. ..|++|++++|++
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~-----~~G~~V~~~~~~~ 73 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAK-----MIGARIYTTAGSD 73 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HHTCEEEEEESSH
T ss_pred CCCEEEEeeCCChHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 46899999999999999999998 6899999998864
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0017 Score=54.23 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHH--HHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLS--LAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~--l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+|++|||||++-||.+ ++.+|. +.|++|++++|+..
T Consensus 59 ~gK~aLVTGassGIG~A~aia~ala-----~~Ga~Vi~~~r~~~ 97 (418)
T 4eue_A 59 GPKKVLIVGASSGFGLATRISVAFG-----GPEAHTIGVSYETG 97 (418)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHS-----SSCCEEEEEECCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHH-----hCCCEEEEEecCcc
Confidence 46899999999999999 999999 68999999988653
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00099 Score=55.28 Aligned_cols=37 Identities=19% Similarity=0.115 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCC-CCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPG-SPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~-~g~~V~~l~R~~~ 49 (176)
.+|++|||||++-||.++++.|+ . .|+.|++++|+..
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA-----~g~GA~Vv~~~~~~~ 83 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAA-----FGCGADTLGVFFERP 83 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHH-----HHHCCEEEEEECCCC
T ss_pred CCCEEEEeCcchHHHHHHHHHHH-----HhcCCEEEEEeCCch
Confidence 46899999999999999999999 7 8999999887643
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0016 Score=51.07 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=31.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++|.|.|+||.+|+.+++.|. ..|++|++++|++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~-----~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIH-----DSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHH-----hCCCEEEEEECCH
Confidence 689999999999999999999 6899999998864
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0027 Score=51.85 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=29.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++++|.|.||+|.+|+.+++.|.+ ...++++++.++
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~----~p~~elvai~~~ 50 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLAN----HPHFQVTLMTAD 50 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHT----CSSEEEEEEBCS
T ss_pred cCcEEEEECcCCHHHHHHHHHHHc----CCCcEEEEEeCc
Confidence 346899999999999999999994 345688888654
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0022 Score=61.97 Aligned_cols=36 Identities=22% Similarity=0.150 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCChH-HHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTGI-SGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGf-iG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.++++|||||+|. ||.+++++|+ ..|++|++++++
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA-----~~GA~VVl~~~R 686 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLL-----SGGAKVIVTTSR 686 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHH-----HTTCEEEEEESS
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHH-----HCCCEEEEEecC
Confidence 35689999999999 9999999999 799999988543
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0018 Score=45.34 Aligned_cols=36 Identities=25% Similarity=0.201 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++++++|+|+ |.+|+.+++.|. +.|++|+++++++.
T Consensus 6 ~~~~viIiG~-G~~G~~la~~L~-----~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGY-GRVGSLLGEKLL-----ASDIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHH-----HTTCCEEEEESCHH
T ss_pred CCCCEEEECc-CHHHHHHHHHHH-----HCCCCEEEEECCHH
Confidence 4568999996 999999999999 78999999998754
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0015 Score=49.16 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|+|+|+ |.+|+++++.|. ..|++|+++++++.
T Consensus 1 M~iiIiG~-G~~G~~la~~L~-----~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSML-----SRKYGVVIINKDRE 34 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHH-----HTTCCEEEEESCHH
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCHH
Confidence 47999996 999999999999 68999999998753
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0015 Score=61.92 Aligned_cols=35 Identities=23% Similarity=0.140 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChH-HHHHHHHHhhCCCCCCCCcEEEEE-ecC
Q 030483 8 PKSVALIIGVTGI-SGLSLAEALKNPTTPGSPWKVYGA-ARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGf-iG~~l~~~L~~~~~~~~g~~V~~l-~R~ 47 (176)
.+|++|||||+|. ||.+++++|+ +.|++|+++ .|+
T Consensus 475 ~GKvALVTGASgGGIGrAIAr~LA-----~~GA~VVL~~~R~ 511 (1688)
T 2pff_A 475 KDKYVLITGAGKGSIGAEVLQGLL-----QGGAKVVVTTSRF 511 (1688)
T ss_dssp CSCCEEECSCSSSSTHHHHHHHHH-----HHTCEEEEEESSC
T ss_pred CCCEEEEECCChHHHHHHHHHHHH-----HCcCEEEEEeCCC
Confidence 4688999999999 9999999999 799999988 453
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.013 Score=47.64 Aligned_cols=83 Identities=13% Similarity=0.087 Sum_probs=54.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCC-----------CCC--C-----C--------Ccc
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPP-----------GWF--P-----T--------ALV 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~-----------~~~--~-----~--------~~v 58 (176)
|..+||.|+|++|++|+.++..|+ ..| .+|..+++.... ... . + +.|
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~-----~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvV 80 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAA-----MMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYI 80 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHH-----HTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHH-----hcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEE
Confidence 345789999999999999999888 466 479888875321 000 0 0 111
Q ss_pred ----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEec
Q 030483 59 ----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 97 (176)
Q Consensus 59 ----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~S 97 (176)
..+...++..|+...+.+++.+.+. ++....++.+|
T Consensus 81 vitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~---~p~a~~vlvvs 126 (343)
T 3fi9_A 81 VSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSY---CPDCKHVIIIF 126 (343)
T ss_dssp EECCC-------CHHHHHHHHHHHHHHHHHHHHHH---CTTCCEEEECS
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh---ccCcEEEEEec
Confidence 1123456889999999999999988 54433344444
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0025 Score=48.02 Aligned_cols=35 Identities=37% Similarity=0.421 Sum_probs=30.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++|.|+| +|.+|+.+++.|. ..|++|++++|++
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~-----~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLV-----GSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHH-----HTTCCEEEEESSH
T ss_pred CCCEEEEEc-cCHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 446899999 8999999999999 6889999999874
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0047 Score=49.25 Aligned_cols=36 Identities=25% Similarity=0.240 Sum_probs=32.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++||+||+|-||..+++.+. ..|++|++++|++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~-----~~G~~V~~~~~~~ 180 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAK-----LKGCKVVGAAGSD 180 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHH-----HTTCEEEEEESSH
T ss_pred CCCEEEEecCCCcHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 46899999999999999999998 6899999998864
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0036 Score=60.63 Aligned_cols=34 Identities=21% Similarity=0.094 Sum_probs=30.7
Q ss_pred CCCCeEEEEcCChH-HHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 7 NPKSVALIIGVTGI-SGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 7 ~~~~~vLVtGatGf-iG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
+.+|++|||||+|. ||.+++++|+ ..|++|++++
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La-----~~GA~Vvl~~ 707 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLL-----QGGAKVVVTT 707 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHH-----HTTCEEEEEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHH-----HCCCEEEEEe
Confidence 35689999999999 9999999999 7999999884
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0046 Score=49.67 Aligned_cols=37 Identities=19% Similarity=0.153 Sum_probs=33.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++||+||+|-||..+++.+. ..|++|++++|++.
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~-----~~Ga~V~~~~~~~~ 205 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAK-----AMGYRVLGIDGGEG 205 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECSTT
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCcEEEEcCCHH
Confidence 46799999999999999999998 68999999998754
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.005 Score=50.03 Aligned_cols=33 Identities=30% Similarity=0.393 Sum_probs=28.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+|||+|.|| |++|+.+++.|. +.++|+..+|+.
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~------~~~~v~~~~~~~ 48 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLK------DEFDVYIGDVNN 48 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHT------TTSEEEEEESCH
T ss_pred ccEEEEECC-CHHHHHHHHHHh------cCCCeEEEEcCH
Confidence 478999998 999999999987 457898888764
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0063 Score=48.08 Aligned_cols=37 Identities=22% Similarity=0.144 Sum_probs=32.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|.++|.|.||.|.+|+.++..|. ..|++|++++|++.
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~-----~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLR-----ASGYPISILDREDW 56 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHH-----TTTCCEEEECTTCG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHH-----hCCCeEEEEECCcc
Confidence 34579999999999999999999 68999999998754
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0064 Score=49.34 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=29.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+++|.|.||+|.+|+.+++.|.+ ....+++++.++
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~----~p~~elv~v~s~ 38 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALS----HPYLEVKQVTSR 38 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHT----CTTEEEEEEBCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHc----CCCcEEEEEECc
Confidence 46899999999999999999994 355688887664
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0042 Score=45.21 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=31.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCC-CcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~ 49 (176)
.+++++|+| .|.+|+.+++.|. .. |++|++++|++.
T Consensus 38 ~~~~v~IiG-~G~~G~~~a~~L~-----~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 38 GHAQVLILG-MGRIGTGAYDELR-----ARYGKISLGIEIREE 74 (183)
T ss_dssp TTCSEEEEC-CSHHHHHHHHHHH-----HHHCSCEEEEESCHH
T ss_pred CCCcEEEEC-CCHHHHHHHHHHH-----hccCCeEEEEECCHH
Confidence 356899998 5999999999999 67 999999998753
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.006 Score=48.80 Aligned_cols=79 Identities=15% Similarity=0.161 Sum_probs=54.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCC--------C-CC---------CC--------Ccc---
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPP--------G-WF---------PT--------ALV--- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~--------~-~~---------~~--------~~v--- 58 (176)
+||.|+||+|++|+.++..|+ ..| .+|..+++.... . .. .+ +.|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~-----~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ 75 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLK-----NSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIP 75 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHH-----TCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHH-----hCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEEC
Confidence 489999999999999999999 566 689999886511 0 00 00 111
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEec
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 97 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~S 97 (176)
..+..+.+..|+..++.+++.+.+. ++.. .|+.+|
T Consensus 76 ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~---~p~a-~viv~s 117 (314)
T 1mld_A 76 AGVPRKPGMTRDDLFNTNATIVATLTAACAQH---CPDA-MICIIS 117 (314)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH---CTTS-EEEECS
T ss_pred CCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh---CCCe-EEEEEC
Confidence 1123456789999999999999988 5443 455543
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.05 E-value=0.0042 Score=49.40 Aligned_cols=36 Identities=22% Similarity=0.203 Sum_probs=32.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++||+||+|.||..+++.+. ..|++|++++|++
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~-----~~G~~V~~~~~~~ 175 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAK-----ALGAKLIGTVGTA 175 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHH-----HHTCEEEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 46899999999999999999998 6899999999864
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0054 Score=51.82 Aligned_cols=36 Identities=19% Similarity=0.240 Sum_probs=30.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++|+|+|+ |++|+++++.|++ ..+++|++++|+.
T Consensus 22 ~~k~VlIiGA-GgiG~aia~~L~~----~~g~~V~v~~R~~ 57 (467)
T 2axq_A 22 MGKNVLLLGS-GFVAQPVIDTLAA----NDDINVTVACRTL 57 (467)
T ss_dssp -CEEEEEECC-STTHHHHHHHHHT----STTEEEEEEESSH
T ss_pred CCCEEEEECC-hHHHHHHHHHHHh----CCCCeEEEEECCH
Confidence 4578999997 9999999999993 3489999999864
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0078 Score=48.15 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=32.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++|||+||+|-||..+++.+. ..|++|++++|++
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~-----~~G~~V~~~~~~~ 190 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAK-----MMGCYVVGSAGSK 190 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 46799999999999999999998 6899999999864
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.007 Score=48.87 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=32.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++||+||+|-||..+++.+. ..|++|++++|++.
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~-----~~Ga~Vi~~~~~~~ 206 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIAR-----AYGLKILGTAGTEE 206 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESSHH
T ss_pred CcCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCChh
Confidence 46799999999999999999998 68999999998653
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=95.98 E-value=0.0046 Score=49.34 Aligned_cols=36 Identities=19% Similarity=0.163 Sum_probs=32.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++||+||+|.||..+++.+. ..|++|++++|++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~-----~~G~~Vi~~~~~~ 180 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWAR-----HLGATVIGTVSTE 180 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHH-----HTTCEEEEEESSH
T ss_pred CCCEEEEECCccHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 46799999999999999999998 6899999999875
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=95.96 E-value=0.0099 Score=48.10 Aligned_cols=23 Identities=26% Similarity=0.356 Sum_probs=21.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhh
Q 030483 8 PKSVALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~ 30 (176)
|+++|+|.||+|.+|+.|++.|+
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~ 27 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLD 27 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHH
T ss_pred CCcEEEEECCCCHHHHHHHHHHH
Confidence 45689999999999999999998
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=95.95 E-value=0.0065 Score=48.51 Aligned_cols=37 Identities=19% Similarity=0.215 Sum_probs=32.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++|||+||+|-||..+++.+. ..|++|++++|++.
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~-----~~Ga~Vi~~~~~~~ 185 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIAR-----LKGCRVVGIAGGAE 185 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 46799999999999999999988 68999999998653
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.008 Score=48.37 Aligned_cols=43 Identities=21% Similarity=0.120 Sum_probs=31.0
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCC
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP 49 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~ 49 (176)
|+++.-+++++|.|+|| |.+|..++..|. ..|+ +|+.++++..
T Consensus 6 ~~~~~~~~~~kI~ViGa-G~vG~~iA~~la-----~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 6 YKYNTVIMRKKISIIGA-GQIGSTIALLLG-----QKDLGDVYMFDIIEG 49 (328)
T ss_dssp -------CCCEEEEECC-SHHHHHHHHHHH-----HTTCCEEEEECSSTT
T ss_pred hhhcccCCCCEEEEECC-CHHHHHHHHHHH-----hCCCCeEEEEECCHH
Confidence 56654345579999998 999999999998 6788 8999888653
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.0091 Score=49.35 Aligned_cols=34 Identities=24% Similarity=0.177 Sum_probs=28.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC---cEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP---WKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g---~~V~~l~R~~~ 49 (176)
++|+|+|| |+||+++++.|+ +.| .+|...+|+..
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~-----~~g~~~~~V~v~~r~~~ 38 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMA-----MNREVFSHITLASRTLS 38 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----TCTTTCCEEEEEESCHH
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCCceEEEEEECCHH
Confidence 58999999 999999999999 566 38999988743
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=95.85 E-value=0.0076 Score=48.62 Aligned_cols=37 Identities=11% Similarity=-0.107 Sum_probs=32.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++|||+||+|-||..+++.+. ..|++|++++|++.
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~-----~~Ga~Vi~~~~~~~ 198 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTR-----MAGAIPLVTAGSQK 198 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCHH
T ss_pred CCCEEEEECCccHHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 46799999999999999999998 68999999998643
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=95.81 E-value=0.0081 Score=48.37 Aligned_cols=34 Identities=15% Similarity=0.146 Sum_probs=31.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
++|||+||+|-||..+++.+. ..|+ +|++++|++
T Consensus 162 ~~vlI~GasggiG~~~~~~a~-----~~Ga~~Vi~~~~~~ 196 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGH-----FLGCSRVVGICGTH 196 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHH-----HTTCSEEEEEESCH
T ss_pred cEEEEECCCcHHHHHHHHHHH-----HCCCCeEEEEeCCH
Confidence 899999999999999999998 6899 999999864
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=95.77 E-value=0.004 Score=48.91 Aligned_cols=34 Identities=21% Similarity=0.089 Sum_probs=28.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
+++|.|+|++|.+|+.+++.+.+ ..++++.++.+
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~----~~~~elva~~d 38 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALA----LEGVQLGAALE 38 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHH----STTEECCCEEC
T ss_pred CcEEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEe
Confidence 46899999999999999998874 57899875544
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=95.69 E-value=0.012 Score=45.85 Aligned_cols=36 Identities=22% Similarity=0.163 Sum_probs=30.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..+++++|+|+ |-+|++++..|+ ..|++|+.++|+.
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~-----~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLL-----SLDCAVTITNRTV 152 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHH-----HcCCEEEEEECCH
Confidence 34689999998 569999999999 6889999988863
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=95.60 E-value=0.01 Score=46.62 Aligned_cols=38 Identities=24% Similarity=0.379 Sum_probs=33.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+++|||+||+|-+|..+++.+. ..|.+|++++|++..
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~-----~~Ga~Vi~~~~~~~~ 162 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVAR-----AMGLRVLAAASRPEK 162 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHH-----HTTCEEEEEESSGGG
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHH
Confidence 45799999999999999999888 688999999986543
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=95.57 E-value=0.01 Score=41.50 Aligned_cols=34 Identities=24% Similarity=0.284 Sum_probs=29.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++++|+|+ |.+|+.+++.|. ..|++|+.++|++
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~-----~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFS-----YPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCC-----TTTCEEEEEESCH
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEcCCH
Confidence 679999996 999999999999 6888988888864
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.55 E-value=0.0098 Score=47.66 Aligned_cols=37 Identities=14% Similarity=0.061 Sum_probs=32.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++||+||+|-+|..+++.+. ..|++|++++|++.
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~-----~~G~~Vi~~~~~~~ 202 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAK-----LFGARVIATAGSED 202 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHH-----HTTCEEEEEESSHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 46799999999999999999998 68999999998643
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.012 Score=46.09 Aligned_cols=34 Identities=24% Similarity=0.169 Sum_probs=29.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++|.|.|+ |-+|+.++..|. ..|++|+.++|++
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~-----~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 3 AMKIAIAGA-GAMGSRLGIMLH-----QGGNDVTLIDQWP 36 (316)
T ss_dssp -CEEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSCH
T ss_pred CCeEEEECc-CHHHHHHHHHHH-----hCCCcEEEEECCH
Confidence 358999995 999999999999 6899999999864
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.016 Score=47.68 Aligned_cols=36 Identities=17% Similarity=0.223 Sum_probs=26.9
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE
Q 030483 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA 44 (176)
Q Consensus 5 ~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l 44 (176)
++|++.+|.|.||||++|..|++.|.+ ....++..+
T Consensus 15 ~~M~~~kVaIvGAtG~vG~ell~lL~~----hp~~el~~l 50 (381)
T 3hsk_A 15 SHMSVKKAGVLGATGSVGQRFILLLSK----HPEFEIHAL 50 (381)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHTT----CSSEEEEEE
T ss_pred ccCCccEEEEECCCChHHHHHHHHHHc----CCCceEEEe
Confidence 456777999999999999999998883 334577655
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=95.40 E-value=0.01 Score=60.01 Aligned_cols=38 Identities=18% Similarity=0.160 Sum_probs=34.2
Q ss_pred CCCCeEEEEcCChH-HHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGI-SGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGf-iG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..+|++|||||++- ||.+++++|+ +.|++|++.+|+..
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La-----~~GA~Vvi~~r~~~ 2172 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLL-----DGGATVIATTSRLD 2172 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHH-----HTTCEEEEEESCCS
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHH-----HCCCEEEEEeCChh
Confidence 46789999999999 9999999999 79999999988653
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=95.38 E-value=0.018 Score=46.19 Aligned_cols=38 Identities=24% Similarity=0.323 Sum_probs=33.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+++|||+||+|-||..+++.+. ..|.+|+++++++.+
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~-----~~Ga~Vi~~~~~~~~ 196 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAK-----GMGAKVIAVVNRTAA 196 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESSGGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCEEEEEeCCHHH
Confidence 46799999999999999999998 689999999986543
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.37 E-value=0.015 Score=46.49 Aligned_cols=34 Identities=18% Similarity=0.159 Sum_probs=30.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++|.|.|+ |.+|+.++..|. ..|++|+.++|++
T Consensus 4 ~mki~iiG~-G~~G~~~a~~L~-----~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGL-GNGGHAFAAYLA-----LKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSCH
T ss_pred cCeEEEECC-CHHHHHHHHHHH-----hCCCEEEEEeCCH
Confidence 468999995 999999999999 6899999999864
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.37 E-value=0.02 Score=46.39 Aligned_cols=33 Identities=18% Similarity=0.301 Sum_probs=28.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
+.+|.|.||+|.+|+.+++.|.+ ....++.++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~----~p~~elvai~ 36 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAK----HPYLELVKVS 36 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTT----CSSEEEEEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHh----CCCcEEEEEe
Confidence 46899999999999999999984 4557888885
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.36 E-value=0.0073 Score=45.54 Aligned_cols=35 Identities=29% Similarity=0.376 Sum_probs=30.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEE-EecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~~ 49 (176)
+++|.|.| +|.+|+++++.|. ..|++|+. .+|++.
T Consensus 23 mmkI~IIG-~G~mG~~la~~l~-----~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIG-AGAIGSALAERFT-----AAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEE-CHHHHHHHHHHHH-----HTTCCEEEECTTCGG
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-----hCCCEEEEEECCCHH
Confidence 46899999 8999999999999 68999998 777654
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=95.30 E-value=0.016 Score=46.18 Aligned_cols=37 Identities=22% Similarity=0.189 Sum_probs=32.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++|||+||+|-||..+++.+. ..|.+|+++++++.
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~-----~~Ga~Vi~~~~~~~ 184 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLK-----MKGAHTIAVASTDE 184 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHH-----HTTCEEEEEESSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 46799999999999999999888 68999999998643
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=95.27 E-value=0.012 Score=44.52 Aligned_cols=35 Identities=23% Similarity=0.132 Sum_probs=29.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++++|+|+ |.+|+.+++.|. +.|+ |++++|++.
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~-----~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELR-----GSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHST-----TSEE-EEEESCGGG
T ss_pred CCCEEEEECC-ChHHHHHHHHHH-----hCCe-EEEEECCHH
Confidence 3578999997 999999999999 6899 999988753
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.26 E-value=0.023 Score=45.75 Aligned_cols=37 Identities=22% Similarity=0.145 Sum_probs=32.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++|||+||+|-||..+++.+. ..|.+|++++|++.
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~-----~~Ga~Vi~~~~~~~ 203 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLAR-----AFGAEVYATAGSTG 203 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESSHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 46799999999999999999998 68999999998654
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=95.26 E-value=0.022 Score=45.43 Aligned_cols=37 Identities=35% Similarity=0.567 Sum_probs=32.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRP 48 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~ 48 (176)
+++.++|.|.| .|.+|..+++.|. ..|+ +|++++|++
T Consensus 30 ~~~~~kI~IIG-~G~mG~slA~~l~-----~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 30 SLSMQNVLIVG-VGFMGGSFAKSLR-----RSGFKGKIYGYDINP 68 (314)
T ss_dssp CCSCSEEEEES-CSHHHHHHHHHHH-----HTTCCSEEEEECSCH
T ss_pred hcCCCEEEEEe-eCHHHHHHHHHHH-----hCCCCCEEEEEECCH
Confidence 34567999999 7999999999999 6899 999999875
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=95.20 E-value=0.013 Score=47.36 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=32.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++|||+||+|.||..+++.+. ..|++|++++|++
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~-----~~Ga~Vi~~~~~~ 198 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSK-----KAKCHVIGTCSSD 198 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHH-----HTTCEEEEEESSH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----hCCCEEEEEECCH
Confidence 45799999999999999999998 6899999999864
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=95.10 E-value=0.022 Score=44.71 Aligned_cols=38 Identities=24% Similarity=0.216 Sum_probs=30.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEE-EecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~ 48 (176)
|.++||.|+|++|.+|+.+++.+.+ ..++++.+ ++|+.
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~----~~~~eLv~~~d~~~ 43 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLA----APDATLVGALDRTG 43 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHH----CTTEEEEEEBCCTT
T ss_pred ccccEEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEEecC
Confidence 4457999999999999999999985 67888777 46654
|
| >1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* | Back alignment and structure |
|---|
Probab=95.07 E-value=0.024 Score=45.74 Aligned_cols=38 Identities=24% Similarity=0.142 Sum_probs=32.3
Q ss_pred CCCCCC-eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 5 DQNPKS-VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 5 ~~~~~~-~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.||+| +|.|.|+ |-+|..++..|. ..|++|+.++|++
T Consensus 10 ~~~m~M~kI~iIG~-G~mG~~la~~L~-----~~G~~V~~~~r~~ 48 (366)
T 1evy_A 10 DELLYLNKAVVFGS-GAFGTALAMVLS-----KKCREVCVWHMNE 48 (366)
T ss_dssp CCCCCEEEEEEECC-SHHHHHHHHHHT-----TTEEEEEEECSCH
T ss_pred hHhhccCeEEEECC-CHHHHHHHHHHH-----hCCCEEEEEECCH
Confidence 345655 8999995 999999999999 6899999999864
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.07 E-value=0.026 Score=45.90 Aligned_cols=36 Identities=19% Similarity=0.140 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++++|+|+ |-||..+++.|. ..|++|++++|++.
T Consensus 165 ~~~~V~ViGa-G~iG~~~a~~l~-----~~Ga~V~~~d~~~~ 200 (369)
T 2eez_A 165 APASVVILGG-GTVGTNAAKIAL-----GMGAQVTILDVNHK 200 (369)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEECCHH
Confidence 3579999999 999999999999 79999999998753
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=95.06 E-value=0.016 Score=46.07 Aligned_cols=37 Identities=22% Similarity=0.249 Sum_probs=32.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++|||+||+|-||..+++.+. ..|.+|++++|++.
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~-----~~Ga~Vi~~~~~~~ 176 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAK-----ALGAKLIGTVSSPE 176 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HHTCEEEEEESSHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 46799999999999999999988 68999999998653
|
| >1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* | Back alignment and structure |
|---|
Probab=95.05 E-value=0.025 Score=43.76 Aligned_cols=34 Identities=26% Similarity=0.266 Sum_probs=30.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|.|.|+ |.+|+.++..|. ..|++|+.++|++.
T Consensus 1 m~i~iiG~-G~~G~~~a~~l~-----~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 1 MKITVLGC-GALGQLWLTALC-----KQGHEVQGWLRVPQ 34 (291)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSSCC
T ss_pred CeEEEECc-CHHHHHHHHHHH-----hCCCCEEEEEcCcc
Confidence 47999997 999999999999 68999999999764
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=95.04 E-value=0.025 Score=45.23 Aligned_cols=38 Identities=13% Similarity=0.129 Sum_probs=33.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+++|||+||+|-||..+++.+. ..|.+|+++++++..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~-----~~Ga~Vi~~~~~~~~ 181 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQ-----ILNFRLIAVTRNNKH 181 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HHTCEEEEEESSSTT
T ss_pred CCCEEEEeCCccHHHHHHHHHHH-----HcCCEEEEEeCCHHH
Confidence 46799999999999999998888 689999999987654
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=95.01 E-value=0.023 Score=45.86 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=26.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCC--CCcEEEEEe
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPG--SPWKVYGAA 45 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~ 45 (176)
+++|.|.||+|.+|+.|++.|++ . ...+++++.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~----~~~p~~elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQE----REFPVDELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHH----TTCCEEEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhc----CCCCCEEEEEEE
Confidence 36899999999999999999983 2 346777776
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=95.01 E-value=0.02 Score=46.37 Aligned_cols=34 Identities=18% Similarity=0.291 Sum_probs=28.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++|.|.||||++|+.|++.|.+ ...+++..+..+
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~----~p~~el~~l~s~ 38 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNR----HPHMNITALTVS 38 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH----CTTEEEEEEEEE
T ss_pred eEEEEECCCChHHHHHHHHHHh----CCCCcEEEEEec
Confidence 6899999999999999999984 467788877543
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=94.91 E-value=0.04 Score=43.19 Aligned_cols=34 Identities=18% Similarity=0.092 Sum_probs=29.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
..+++++|||++ -+|++++..|+ ..| +|+.++|+
T Consensus 126 l~~k~vlV~GaG-giG~aia~~L~-----~~G-~V~v~~r~ 159 (287)
T 1nvt_A 126 VKDKNIVIYGAG-GAARAVAFELA-----KDN-NIIIANRT 159 (287)
T ss_dssp CCSCEEEEECCS-HHHHHHHHHHT-----SSS-EEEEECSS
T ss_pred cCCCEEEEECch-HHHHHHHHHHH-----HCC-CEEEEECC
Confidence 346899999986 79999999999 688 99988875
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=94.89 E-value=0.029 Score=45.49 Aligned_cols=75 Identities=13% Similarity=0.162 Sum_probs=47.9
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCC--CCCCcEEEEEecCCCC-------------CCC----------------CCCc
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTT--PGSPWKVYGAARRPPP-------------GWF----------------PTAL 57 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~--~~~g~~V~~l~R~~~~-------------~~~----------------~~~~ 57 (176)
.-||.|+||+|.||++|+-.|..+.- ...-.++..++..+.. ..+ ..+.
T Consensus 24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~adv 103 (345)
T 4h7p_A 24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGVAI 103 (345)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCCCE
Confidence 34899999999999999988872000 0011367777754320 000 0011
Q ss_pred c----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 58 V----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 58 v----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
+ ..+...+++.|....+.+.+++.+.
T Consensus 104 Vvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~ 139 (345)
T 4h7p_A 104 AIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAV 139 (345)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhh
Confidence 1 1245678999999999999999875
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.84 E-value=0.023 Score=44.83 Aligned_cols=35 Identities=17% Similarity=0.137 Sum_probs=30.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++|.|.| .|.+|+.++..|. ..|++|++++|++.
T Consensus 30 ~~~I~iIG-~G~mG~~~a~~l~-----~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLG-LGLMGSGIVSNLL-----KMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSGG
T ss_pred CCeEEEEc-ccHHHHHHHHHHH-----hCCCEEEEEeCCHH
Confidence 37899999 5999999999999 68999999988754
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=94.83 E-value=0.028 Score=45.17 Aligned_cols=34 Identities=15% Similarity=0.062 Sum_probs=29.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
++||.|+|| |.+|..++..|. ..|+ +|+.++++.
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la-----~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCA-----LRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HHTCCEEEEECSSS
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCCeEEEEECCh
Confidence 368999998 999999999999 6787 898888875
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=94.80 E-value=0.04 Score=43.63 Aligned_cols=43 Identities=23% Similarity=0.353 Sum_probs=29.3
Q ss_pred CcCCCCCC-CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE-ecCC
Q 030483 2 EKQDQNPK-SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRP 48 (176)
Q Consensus 2 ~~~~~~~~-~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~ 48 (176)
|.|.+|++ .||.|.|++|-+|+.+++.+.+ ..+.++.++ +|++
T Consensus 13 ~~~~~m~~~irV~V~Ga~GrMGr~i~~~v~~----~~~~eLvg~vd~~~ 57 (288)
T 3ijp_A 13 EAQTQGPGSMRLTVVGANGRMGRELITAIQR----RKDVELCAVLVRKG 57 (288)
T ss_dssp --------CEEEEESSTTSHHHHHHHHHHHT----CSSEEEEEEBCCTT
T ss_pred hhhhhccCCeEEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEecCC
Confidence 34566654 5899999999999999999985 678887766 5543
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=94.79 E-value=0.024 Score=45.38 Aligned_cols=37 Identities=22% Similarity=0.299 Sum_probs=32.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCC-CcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~ 49 (176)
.++++||+|++|-||..+++.+. .. |++|++++|++.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~-----~~~Ga~Vi~~~~~~~ 207 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAK-----AVSGATIIGVDVREE 207 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HHTCCEEEEEESSHH
T ss_pred CCCEEEEECCCccHHHHHHHHHH-----HcCCCeEEEEcCCHH
Confidence 45799999999899999999998 57 999999988653
|
| >3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=94.75 E-value=0.029 Score=44.60 Aligned_cols=35 Identities=26% Similarity=0.190 Sum_probs=29.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+++|+|.| .|-+|+.++..|. ..|++|+.++|++
T Consensus 1 M~mkI~IiG-aGaiG~~~a~~L~-----~~g~~V~~~~r~~ 35 (320)
T 3i83_A 1 MSLNILVIG-TGAIGSFYGALLA-----KTGHCVSVVSRSD 35 (320)
T ss_dssp --CEEEEES-CCHHHHHHHHHHH-----HTTCEEEEECSTT
T ss_pred CCCEEEEEC-cCHHHHHHHHHHH-----hCCCeEEEEeCCh
Confidence 347899997 5889999999999 6899999999874
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=94.70 E-value=0.036 Score=41.38 Aligned_cols=35 Identities=14% Similarity=0.127 Sum_probs=30.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++|.|.| .|.+|+.++..|. ..|++|+.++|++.
T Consensus 19 ~~~I~iiG-~G~mG~~la~~l~-----~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFG-KGNMGQAIGHNFE-----IAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECTTCC
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEcCCHH
Confidence 56899999 7999999999999 68999999998765
|
| >2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=94.67 E-value=0.025 Score=47.84 Aligned_cols=42 Identities=17% Similarity=0.102 Sum_probs=33.9
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCC--CcEEEEEecCC
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRP 48 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~ 48 (176)
|....+++.++|.|.| .|.+|..++..|. .. |++|++++|++
T Consensus 1 m~~~~~~~~mkI~VIG-~G~vG~~~A~~La-----~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 1 MTDQVFGKVSKVVCVG-AGYVGGPTCAMIA-----HKCPHITVTVVDMNT 44 (481)
T ss_dssp --CCSSCCCCEEEEEC-CSTTHHHHHHHHH-----HHCTTSEEEEECSCH
T ss_pred CCCCCCCCCCEEEEEC-CCHHHHHHHHHHH-----hcCCCCEEEEEECCH
Confidence 6666667678999998 6999999999999 45 79999999864
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=94.65 E-value=0.033 Score=45.59 Aligned_cols=23 Identities=22% Similarity=0.392 Sum_probs=20.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhh
Q 030483 8 PKSVALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~ 30 (176)
|+.+|.|.||||++|..|++.|.
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~ 23 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLE 23 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHh
Confidence 45789999999999999999988
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=94.64 E-value=0.024 Score=44.15 Aligned_cols=35 Identities=23% Similarity=0.221 Sum_probs=30.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++++|+|+ |-+|++++..|+ ..|++|+.++|+.
T Consensus 118 ~~~~vlvlGa-Gg~g~a~a~~L~-----~~G~~v~v~~R~~ 152 (272)
T 1p77_A 118 PNQHVLILGA-GGATKGVLLPLL-----QAQQNIVLANRTF 152 (272)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHH-----HTTCEEEEEESSH
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 4679999998 669999999999 6789999998864
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=94.61 E-value=0.031 Score=45.12 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=31.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++|||+|+ |-||..+++.+. ..|.+|++++|++
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~-----~~Ga~Vi~~~~~~ 214 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFR-----TYGLEVWMANRRE 214 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHH-----HHTCEEEEEESSC
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEeCCc
Confidence 689999999 999999999888 6889999999876
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=94.58 E-value=0.033 Score=44.36 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=31.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..++|.|.| .|.+|+.+++.|. ..|++|++++|++.
T Consensus 30 ~~~~I~iIG-~G~mG~~~a~~l~-----~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 30 YARKITFLG-TGSMGLPMARRLC-----EAGYALQVWNRTPA 65 (320)
T ss_dssp CCSEEEEEC-CTTTHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred CCCEEEEEC-ccHHHHHHHHHHH-----hCCCeEEEEcCCHH
Confidence 346899997 5999999999999 68999999998754
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=94.48 E-value=0.038 Score=43.65 Aligned_cols=36 Identities=25% Similarity=0.177 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+.++|.|.| .|.+|+.+++.|+ ..|++|++++|++.
T Consensus 8 ~~~~IgiIG-~G~mG~~~A~~l~-----~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 8 FEFDVSVIG-LGAMGTIMAQVLL-----KQGKRVAIWNRSPG 43 (306)
T ss_dssp CSCSEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 456899997 7999999999999 69999999998754
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=94.45 E-value=0.043 Score=42.85 Aligned_cols=35 Identities=14% Similarity=0.128 Sum_probs=30.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++|.|.|+ |.+|+.++..|. ..|++|+.++|++.
T Consensus 4 ~~kV~VIGa-G~mG~~iA~~la-----~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGT-GVLGSQIAFQTA-----FHGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSSHH
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEeCCHH
Confidence 368999985 999999999999 68999999998753
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=94.39 E-value=0.031 Score=43.59 Aligned_cols=35 Identities=23% Similarity=0.351 Sum_probs=30.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+++|.|.| .|.+|+.++..|. ..|++|++++|++.
T Consensus 5 ~m~i~iiG-~G~~G~~~a~~l~-----~~g~~V~~~~~~~~ 39 (299)
T 1vpd_A 5 TMKVGFIG-LGIMGKPMSKNLL-----KAGYSLVVSDRNPE 39 (299)
T ss_dssp -CEEEEEC-CSTTHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred cceEEEEC-chHHHHHHHHHHH-----hCCCEEEEEeCCHH
Confidence 46899999 7999999999999 68999999988643
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=94.39 E-value=0.046 Score=41.74 Aligned_cols=36 Identities=28% Similarity=0.337 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++++|.|.| .|.+|++++..|. ..|++|++.+|++.
T Consensus 18 ~~~kIgiIG-~G~mG~alA~~L~-----~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLG-TGTVGRTMAGALA-----DLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESCHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEeCChh
Confidence 468899996 8999999999999 68999999999764
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=94.38 E-value=0.043 Score=43.95 Aligned_cols=37 Identities=24% Similarity=0.180 Sum_probs=32.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+.+|||+||+|-||..+++.+. ..|.+|+++++++.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~-----~~Ga~Vi~~~~~~~ 186 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAK-----AYGLRVITTASRNE 186 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEECCSHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 46799999999999999999888 68999999988643
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=94.37 E-value=0.035 Score=45.23 Aligned_cols=33 Identities=30% Similarity=0.302 Sum_probs=26.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
+.+|.|.||||++|..|++.|.+ ....++..+.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~----hP~~el~~l~ 39 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSN----HPYIKPAYLA 39 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT----CSSEEEEEEE
T ss_pred CCeEEEECCCCHHHHHHHHHHHh----CCCceEEEEE
Confidence 46899999999999999998874 3446776664
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=94.37 E-value=0.035 Score=45.23 Aligned_cols=33 Identities=30% Similarity=0.302 Sum_probs=26.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
+.+|.|.||||++|..|++.|.+ ....++..+.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~----hP~~el~~l~ 39 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSN----HPYIKPAYLA 39 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT----CSSEEEEEEE
T ss_pred CCeEEEECCCCHHHHHHHHHHHh----CCCceEEEEE
Confidence 46899999999999999998874 3446776664
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=94.36 E-value=0.046 Score=43.79 Aligned_cols=35 Identities=11% Similarity=-0.012 Sum_probs=30.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
.++++||+|+ |-+|++++..|. ..|. +|+.++|++
T Consensus 153 ~gk~~lVlGa-GG~g~aia~~L~-----~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 153 IGKKMTICGA-GGAATAICIQAA-----LDGVKEISIFNRKD 188 (315)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHH-----HTTCSEEEEEECSS
T ss_pred cCCEEEEECC-ChHHHHHHHHHH-----HCCCCEEEEEECCC
Confidence 4689999997 779999999999 6888 899999973
|
| >3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=94.35 E-value=0.032 Score=44.62 Aligned_cols=33 Identities=24% Similarity=0.161 Sum_probs=29.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.++|.|.| .|-+|..++..|. ..|++|+.++|+
T Consensus 3 ~mkI~IiG-aG~~G~~~a~~L~-----~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVG-AGAVGGYLGARLA-----LAGEAINVLARG 35 (335)
T ss_dssp CCCEEEES-CCHHHHHHHHHHH-----HTTCCEEEECCH
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-----HCCCEEEEEECh
Confidence 46899998 5899999999999 689999999985
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=94.27 E-value=0.042 Score=46.09 Aligned_cols=34 Identities=18% Similarity=0.119 Sum_probs=30.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+|+|.|.| .|.+|..++..|. ..|++|++++|++
T Consensus 2 ~mkI~VIG-~G~vG~~lA~~La-----~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 2 SLDIAVVG-IGYVGLVSATCFA-----ELGANVRCIDTDR 35 (450)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCH
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-----hcCCEEEEEECCH
Confidence 36899998 5999999999999 6899999999874
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=94.24 E-value=0.043 Score=43.12 Aligned_cols=36 Identities=22% Similarity=0.094 Sum_probs=31.9
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
+++|.|.| .|.+|+.+++.|. ..|++|++++|++..
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~-----~~G~~V~~~dr~~~~ 50 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMT-----EWPGGVTVYDIRIEA 50 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHT-----TSTTCEEEECSSTTT
T ss_pred CCeEEEEC-cCHHHHHHHHHHH-----HCCCeEEEEeCCHHH
Confidence 46899998 7999999999999 689999999998754
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=94.22 E-value=0.032 Score=44.28 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=30.8
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
+|||+||+|-+|..+++.+. ..|.+|+++++++.+
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~-----~~Ga~vi~~~~~~~~ 187 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLN-----KRGYDVVASTGNREA 187 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHH-----HHTCCEEEEESSSST
T ss_pred eEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHH
Confidence 79999999999999999888 688999999987543
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=94.21 E-value=0.037 Score=43.85 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=31.0
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
+|||+||+|-+|..+++.+. ..|++|+++++++.+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~-----~~Ga~vi~~~~~~~~ 186 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLA-----KRGYTVEASTGKAAE 186 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHH-----HTTCCEEEEESCTTC
T ss_pred eEEEecCCCHHHHHHHHHHH-----HCCCEEEEEECCHHH
Confidence 79999999999999999888 688999999987543
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=94.17 E-value=0.047 Score=43.12 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=29.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~ 48 (176)
.++|.|+|+ |.+|..++..|. ..|+ +|+.++|+.
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~-----~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAA-----QRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HTTCCSEEEEECSSH
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCCCEEEEEeCCh
Confidence 368999998 999999999999 6888 999998864
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=94.17 E-value=0.053 Score=43.17 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~ 48 (176)
|.++|.|.| .|.+|..++..|. ..| ++|++++|++
T Consensus 23 M~m~IgvIG-~G~mG~~lA~~L~-----~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIG-FGEAAQSIAGGLG-----GRNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHH-----TTTCSEEEEECGGG
T ss_pred cCCeEEEEC-ccHHHHHHHHHHH-----HcCCCeEEEEeCCC
Confidence 457899999 7999999999999 789 9999999975
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=94.16 E-value=0.04 Score=45.71 Aligned_cols=36 Identities=17% Similarity=0.119 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++|||+||+|-||..+++.+. ..|.+|+++++++
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~-----~~Ga~vi~~~~~~ 255 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVK-----NGGGIPVAVVSSA 255 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 46899999999999999999888 6899999988754
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=94.11 E-value=0.054 Score=45.23 Aligned_cols=42 Identities=21% Similarity=0.187 Sum_probs=33.6
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|..+....+++|+|.|. |-.|..+++.|. +.|++|++.+++.
T Consensus 1 m~~~~~~~~k~v~viG~-G~sG~s~A~~l~-----~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 1 MKTITTFENKKVLVLGL-ARSGEAAARLLA-----KLGAIVTVNDGKP 42 (451)
T ss_dssp ---CCTTTTCEEEEECC-TTTHHHHHHHHH-----HTTCEEEEEESSC
T ss_pred CcchhhcCCCEEEEEee-CHHHHHHHHHHH-----hCCCEEEEEeCCc
Confidence 66666667789999998 779999999898 7999999999854
|
| >1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* | Back alignment and structure |
|---|
Probab=94.11 E-value=0.028 Score=45.06 Aligned_cols=39 Identities=18% Similarity=0.165 Sum_probs=31.4
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-------cEEEEEecCCC
Q 030483 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSP-------WKVYGAARRPP 49 (176)
Q Consensus 5 ~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-------~~V~~l~R~~~ 49 (176)
..|++++|.|.| .|.+|+.++..|. ..| ++|+.++|++.
T Consensus 4 ~~m~~mkI~iIG-~G~mG~~~a~~l~-----~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 4 GSMASKKVCIVG-SGNWGSAIAKIVG-----GNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp ---CCEEEEEEC-CSHHHHHHHHHHH-----HHHHHCTTEEEEEEEECCCCB
T ss_pred cccCCCeEEEEC-CCHHHHHHHHHHH-----hcCCcccCCCCeEEEEEcChh
Confidence 345567899999 5999999999999 678 89999998765
|
| >2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=94.10 E-value=0.037 Score=42.31 Aligned_cols=36 Identities=14% Similarity=0.162 Sum_probs=30.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCC----cEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP----WKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g----~~V~~l~R~~~~ 50 (176)
+++|.|.|+ |-+|+.++..|. ..| ++|+.++|++..
T Consensus 4 ~m~i~iiG~-G~mG~~~a~~l~-----~~g~~~~~~v~~~~~~~~~ 43 (262)
T 2rcy_A 4 NIKLGFMGL-GQMGSALAHGIA-----NANIIKKENLFYYGPSKKN 43 (262)
T ss_dssp SSCEEEECC-SHHHHHHHHHHH-----HHTSSCGGGEEEECSSCCS
T ss_pred CCEEEEECc-CHHHHHHHHHHH-----HCCCCCCCeEEEEeCCccc
Confidence 458999996 999999999999 577 789999987653
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=94.09 E-value=0.052 Score=43.12 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=28.9
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
++||.|+|+ |.+|+.++..|+ ..|+ +|+.++++.
T Consensus 2 ~~kI~VIGa-G~vG~~~a~~la-----~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 2 RKKISIIGA-GFVGSTTAHWLA-----AKELGDIVLLDIVE 36 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HTTCSEEEEECSSS
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----HCCCCeEEEEeCCc
Confidence 368999998 999999999998 5776 888888764
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=94.09 E-value=0.062 Score=42.21 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=29.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++|.|.|+ |.+|+.++..|. ..|++|++++|++
T Consensus 16 ~~I~VIG~-G~mG~~iA~~la-----~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGG-GLMGAGIAQVAA-----ATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSCH
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCH
Confidence 67999997 999999999999 6899999999874
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=93.98 E-value=0.025 Score=48.32 Aligned_cols=36 Identities=31% Similarity=0.250 Sum_probs=27.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++||||| |-+|++++.+|+ ..|++|+.++|+.
T Consensus 362 l~~k~vlV~Ga-GGig~aia~~L~-----~~G~~V~i~~R~~ 397 (523)
T 2o7s_A 362 LASKTVVVIGA-GGAGKALAYGAK-----EKGAKVVIANRTY 397 (523)
T ss_dssp ----CEEEECC-SHHHHHHHHHHH-----HHCC-CEEEESSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 34678999999 579999999999 6889999888863
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=93.98 E-value=0.06 Score=42.37 Aligned_cols=36 Identities=22% Similarity=0.118 Sum_probs=30.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
..++++||+|+ |-+|++++..|. ..|. +|+.++|+.
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~-----~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALV-----THGVQKLQVADLDT 161 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHH-----HTTCSEEEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHH-----HCCCCEEEEEECCH
Confidence 34689999998 779999999999 6888 698888864
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=93.95 E-value=0.085 Score=42.91 Aligned_cols=35 Identities=29% Similarity=0.242 Sum_probs=30.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++|+|.| .|.+|+.+++++. +.|++|++++..+
T Consensus 13 ~~k~IlIlG-~G~~g~~la~aa~-----~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 13 PGKTIGIIG-GGQLGRMMALAAK-----EMGYKIAVLDPTK 47 (389)
T ss_dssp TTSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESST
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----HcCCEEEEEeCCC
Confidence 467999998 4679999999999 7999999998764
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=93.93 E-value=0.057 Score=45.39 Aligned_cols=35 Identities=26% Similarity=0.295 Sum_probs=30.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.|+|+|.|+ |-+|++|++.|. ..|++|+.+++++.
T Consensus 3 ~M~iiI~G~-G~vG~~la~~L~-----~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGA-GQVGGTLAENLV-----GENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECC-SHHHHHHHHHTC-----STTEEEEEEESCHH
T ss_pred cCEEEEECC-CHHHHHHHHHHH-----HCCCCEEEEECCHH
Confidence 468999996 889999999999 79999999988643
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=93.91 E-value=0.047 Score=45.10 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=31.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
..|++|||||+.-||.+.+.+|.. ..|..|+++.|....
T Consensus 49 ~pK~vLVtGaSsGiGlA~AialAf----~~GA~vi~v~~~~~~ 87 (401)
T 4ggo_A 49 APKNVLVLGCSNGYGLASRITAAF----GYGAATIGVSFEKAG 87 (401)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHH----HHCCEEEEEECCCCC
T ss_pred CCCEEEEECCCCcHHHHHHHHHHh----hCCCCEEEEecCCcc
Confidence 368999999999999998887751 368889999887654
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=93.90 E-value=0.087 Score=41.40 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=29.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
.+++++|+|+ |-+|++++..|. ..|. +|+.++|+.
T Consensus 125 ~~k~vlvlGa-Gg~g~aia~~L~-----~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGA-GGAARGVLKPLL-----DQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----TTCCSEEEEEESSH
T ss_pred cCCEEEEECc-hHHHHHHHHHHH-----hcCCCeEEEEECCH
Confidence 4689999998 669999999999 6886 899888853
|
| >3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=93.89 E-value=0.026 Score=44.29 Aligned_cols=35 Identities=26% Similarity=0.187 Sum_probs=29.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+++|+|.|+ |-+|+.++..|. ..|++|+.++|+.
T Consensus 1 M~mkI~iiGa-Ga~G~~~a~~L~-----~~g~~V~~~~r~~ 35 (294)
T 3g17_A 1 MSLSVAIIGP-GAVGTTIAYELQ-----QSLPHTTLIGRHA 35 (294)
T ss_dssp --CCEEEECC-SHHHHHHHHHHH-----HHCTTCEEEESSC
T ss_pred CCcEEEEECC-CHHHHHHHHHHH-----HCCCeEEEEEecc
Confidence 3468999985 889999999999 6889999999974
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=93.88 E-value=0.081 Score=41.79 Aligned_cols=36 Identities=19% Similarity=0.133 Sum_probs=30.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
..+++++|+|+ |-+|+.++..|+ ..|. +|+.++|+.
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~-----~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLL-----STAAERIDMANRTV 175 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHH-----TTTCSEEEEECSSH
T ss_pred CCCCEEEEECc-HHHHHHHHHHHH-----HCCCCEEEEEeCCH
Confidence 34679999997 669999999999 6887 899998864
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=93.84 E-value=0.034 Score=44.53 Aligned_cols=36 Identities=8% Similarity=-0.010 Sum_probs=31.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
+++||+||+|-||..+++.+. ..|.+|+++++++.+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~-----~~Ga~Vi~~~~~~~~ 201 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAK-----EEGFRPIVTVRRDEQ 201 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHH-----HHTCEEEEEESCGGG
T ss_pred CEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHH
Confidence 689999999999999999888 689999999987543
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=93.82 E-value=0.082 Score=42.28 Aligned_cols=34 Identities=21% Similarity=0.185 Sum_probs=30.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+.+|||+||+|-||..+++.+. ..|.+|+++ ++
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~-----~~Ga~Vi~~-~~ 183 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIAL-----ARGARVFAT-AR 183 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEE-EC
T ss_pred CCCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEE-eC
Confidence 46799999999999999999988 689999988 54
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=93.82 E-value=0.07 Score=43.30 Aligned_cols=34 Identities=29% Similarity=0.194 Sum_probs=30.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++|.|.|+ |.+|++++..|. +.|++|+.++|++
T Consensus 29 ~mkI~VIGa-G~mG~alA~~La-----~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGA-GSWGTALALVLA-----RKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECC-SHHHHHHHHHHH-----TTTCCEEEECSCH
T ss_pred CCeEEEECc-cHHHHHHHHHHH-----HCCCeEEEEeCCH
Confidence 468999995 999999999999 7899999999974
|
| >3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=93.81 E-value=0.037 Score=43.83 Aligned_cols=35 Identities=29% Similarity=0.204 Sum_probs=28.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|.++|+|.| .|-+|+.++..|. ..|++|+.++|+.
T Consensus 1 M~mkI~IiG-aGaiG~~~a~~L~-----~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 1 MSLRIAIVG-AGALGLYYGALLQ-----RSGEDVHFLLRRD 35 (312)
T ss_dssp ---CEEEEC-CSTTHHHHHHHHH-----HTSCCEEEECSTT
T ss_pred CCCEEEEEC-cCHHHHHHHHHHH-----HCCCeEEEEEcCc
Confidence 346899997 4889999999999 6899999999875
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=93.81 E-value=0.075 Score=41.60 Aligned_cols=35 Identities=34% Similarity=0.280 Sum_probs=30.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+++++|+|+ |-.|++++..|. ..|.+|+.++|+..
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~-----~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELK-----KQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSSCT
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 679999996 779999999999 67788999999754
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=93.73 E-value=0.066 Score=42.10 Aligned_cols=35 Identities=23% Similarity=0.312 Sum_probs=30.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++|.|.| .|.+|+.++..|. ..|++|++++|++
T Consensus 6 ~~~~I~iIG-~G~mG~~~a~~l~-----~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVG-LGSMGMGAARSCL-----RAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEECCH
Confidence 346899997 7999999999999 7999999999875
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=93.66 E-value=0.056 Score=42.26 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc---EEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW---KVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~---~V~~l~R~~~ 49 (176)
++++|.|.|+ |-+|++++..|. ..|+ +|++.+|++.
T Consensus 2 ~~~~I~iIG~-G~mG~aia~~l~-----~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 2 NTSNITFIGG-GNMARNIVVGLI-----ANGYDPNRICVTNRSLD 40 (280)
T ss_dssp CCSCEEEESC-SHHHHHHHHHHH-----HTTCCGGGEEEECSSSH
T ss_pred CCCEEEEEcc-cHHHHHHHHHHH-----HCCCCCCeEEEEeCCHH
Confidence 3568999986 999999999999 6788 8999998764
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=93.53 E-value=0.099 Score=42.68 Aligned_cols=36 Identities=19% Similarity=0.180 Sum_probs=31.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++++|+|+ |-||+.+++.|. ..|.+|++++|++.
T Consensus 167 ~g~~V~ViG~-G~iG~~~a~~a~-----~~Ga~V~~~d~~~~ 202 (377)
T 2vhw_A 167 EPADVVVIGA-GTAGYNAARIAN-----GMGATVTVLDINID 202 (377)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEeCCHH
Confidence 4689999998 999999999999 78999999998753
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=93.50 E-value=0.093 Score=40.45 Aligned_cols=34 Identities=12% Similarity=0.199 Sum_probs=28.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++|.|.|++|-+|+.+++.+.+ ..++++.++..+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~----~~~~elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAA----ADDLTLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH----CTTCEEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEcc
Confidence 3799999999999999999884 458998876654
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=93.49 E-value=0.074 Score=41.03 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=29.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|.|.| .|.+|+.+++.|. ..|++|++++|++
T Consensus 1 m~i~iiG-~G~~G~~~a~~l~-----~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 1 MKIGVVG-LGLIGASLAGDLR-----RRGHYLIGVSRQQ 33 (279)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCH
T ss_pred CEEEEEc-CcHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 4799999 7999999999999 6899999998874
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=93.40 E-value=0.067 Score=42.68 Aligned_cols=36 Identities=19% Similarity=0.148 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++|||+|+ |-+|..+++.+. ..|++|++++|++.
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~-----~~Ga~Vi~~~~~~~ 199 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAK-----AMGLNVVAVDIGDE 199 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 4579999999 569999999988 68999999998653
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.34 E-value=0.087 Score=42.61 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=29.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
.+.+|||+||+|-||..+++.+. ..|.+|+++++
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~-----~~Ga~Vi~~~~ 216 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMK-----AWDAHVTAVCS 216 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----hCCCEEEEEeC
Confidence 46799999999999999999888 68899998874
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=93.34 E-value=0.089 Score=41.57 Aligned_cols=36 Identities=22% Similarity=0.184 Sum_probs=31.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++|.|.| .|.+|+.+++.|. ..|++|++++|++..
T Consensus 21 m~~I~iIG-~G~mG~~~A~~l~-----~~G~~V~~~dr~~~~ 56 (310)
T 3doj_A 21 MMEVGFLG-LGIMGKAMSMNLL-----KNGFKVTVWNRTLSK 56 (310)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSGGG
T ss_pred CCEEEEEC-ccHHHHHHHHHHH-----HCCCeEEEEeCCHHH
Confidence 36899997 7999999999999 689999999997643
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=93.29 E-value=0.065 Score=42.86 Aligned_cols=36 Identities=25% Similarity=0.111 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~ 49 (176)
.+.+|||+|+ |-+|..+++.+. ..|+ +|++++|++.
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~-----~~Ga~~Vi~~~~~~~ 203 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAK-----ASGAYPVIVSEPSDF 203 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHH-----HTTCCSEEEECSCHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HcCCCEEEEECCCHH
Confidence 4678999999 999999999888 6898 8999998743
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=93.28 E-value=0.073 Score=42.45 Aligned_cols=74 Identities=22% Similarity=0.170 Sum_probs=47.4
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCC-------------C-CC----------
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG-------------W-FP---------- 54 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~-------------~-~~---------- 54 (176)
|++| +.+||.|+|+ |.+|..++..|+ ..+ .+|..+++..... . ..
T Consensus 1 m~~m---~~~KI~IIGa-G~vG~~la~~l~-----~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a 71 (317)
T 3d0o_A 1 MNKF---KGNKVVLIGN-GAVGSSYAFSLV-----NQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSD 71 (317)
T ss_dssp ---C---CCCEEEEECC-SHHHHHHHHHHH-----HHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGG
T ss_pred CCCC---CCCEEEEECC-CHHHHHHHHHHH-----hCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHH
Confidence 4554 3468999998 999999999998 455 4788887653110 0 00
Q ss_pred ---CCcc----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 55 ---TALV----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 55 ---~~~v----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
.+.| ..+....+..|+.....+.+.+.+.
T Consensus 72 ~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 113 (317)
T 3d0o_A 72 CHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS 113 (317)
T ss_dssp GTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 0111 1123456678888888888888887
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=93.28 E-value=0.084 Score=43.34 Aligned_cols=35 Identities=17% Similarity=0.042 Sum_probs=29.3
Q ss_pred CCCC-CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 5 DQNP-KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 5 ~~~~-~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
.+|| +++|+|.|+ |.+|+.+++++. +.|++|++++
T Consensus 19 ~~mm~~~~I~ilGg-G~lg~~l~~aa~-----~lG~~v~~~d 54 (403)
T 3k5i_A 19 GHMWNSRKVGVLGG-GQLGRMLVESAN-----RLNIQVNVLD 54 (403)
T ss_dssp --CCSCCEEEEECC-SHHHHHHHHHHH-----HHTCEEEEEE
T ss_pred ccCCCCCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEE
Confidence 3444 679999996 789999999999 7999999998
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=93.24 E-value=0.081 Score=42.54 Aligned_cols=37 Identities=22% Similarity=0.151 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+.+|||+|+ |-+|..+++.+. ..|.+|+++++++.+
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak-----~~Ga~Vi~~~~~~~~ 215 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISK-----AMGAETYVISRSSRK 215 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HHTCEEEEEESSSTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEcCCHHH
Confidence 4579999999 999999999887 688899999987654
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=93.22 E-value=0.12 Score=39.85 Aligned_cols=34 Identities=21% Similarity=0.337 Sum_probs=26.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEE-EecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~ 48 (176)
++||.|+|+ |.+|+.+++.+.+ .+.++.+ ++|..
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~-----~~~eLva~~d~~~ 37 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEE-----KGHEIVGVIENTP 37 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEECSSC
T ss_pred ceEEEEECc-CHHHHHHHHHHHh-----CCCEEEEEEecCc
Confidence 368999999 9999999999984 4338766 56653
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=93.19 E-value=0.14 Score=41.52 Aligned_cols=36 Identities=22% Similarity=0.138 Sum_probs=30.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++++|+|.|+ |.+|+.+++++. +.|++|++++..+.
T Consensus 11 ~~~~IlIlG~-G~lg~~la~aa~-----~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGG-GQLGKMMAQSAQ-----KMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEECCCC
Confidence 4679999995 679999999999 79999999987643
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=93.16 E-value=0.086 Score=41.03 Aligned_cols=35 Identities=29% Similarity=0.258 Sum_probs=30.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
++|.|.| .|.+|+.+++.|. ..|++|++++|++..
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~-----~~G~~V~~~dr~~~~ 36 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLV-----KAGCSVTIWNRSPEK 36 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSGGG
T ss_pred CEEEEEe-ecHHHHHHHHHHH-----HCCCeEEEEcCCHHH
Confidence 5899998 5999999999999 689999999997653
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=93.14 E-value=0.062 Score=42.44 Aligned_cols=37 Identities=19% Similarity=0.206 Sum_probs=28.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
|.+||-+.| -|..|..+++.|+ +.||+|++.+|++..
T Consensus 4 Ms~kIgfIG-LG~MG~~mA~~L~-----~~G~~V~v~dr~~~~ 40 (297)
T 4gbj_A 4 MSEKIAFLG-LGNLGTPIAEILL-----EAGYELVVWNRTASK 40 (297)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHH-----HTTCEEEEC------
T ss_pred CCCcEEEEe-cHHHHHHHHHHHH-----HCCCeEEEEeCCHHH
Confidence 556788887 7999999999999 799999999998654
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=93.12 E-value=0.077 Score=42.13 Aligned_cols=33 Identities=18% Similarity=0.076 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
++|.|+|+ |.+|+.++..|. ..|+ +|+.+++++
T Consensus 5 ~kI~VIGa-G~~G~~ia~~la-----~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGS-GQIGGNIAYIVG-----KDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HHTCCEEEEECSSS
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCceEEEEeCCc
Confidence 58999998 999999999999 6788 999998875
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=93.12 E-value=0.092 Score=42.55 Aligned_cols=35 Identities=20% Similarity=0.136 Sum_probs=31.1
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++|+|+|+ |-+|+.+++.|. ..|.+|++++|++.
T Consensus 167 ~~~VlViGa-GgvG~~aa~~a~-----~~Ga~V~v~dr~~~ 201 (361)
T 1pjc_A 167 PGKVVILGG-GVVGTEAAKMAV-----GLGAQVQIFDINVE 201 (361)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCHH
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEeCCHH
Confidence 479999999 999999999999 68889999998753
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=93.11 E-value=0.1 Score=41.88 Aligned_cols=37 Identities=19% Similarity=0.091 Sum_probs=30.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~ 49 (176)
|..+||.|+|+ |.+|..++..|+ ..|+ +|+.+++.+.
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~-----~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAG-----LKELGDVVLFDIAEG 42 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHH-----HTTCCEEEEECSSSS
T ss_pred CcCCEEEEECC-CHHHHHHHHHHH-----hCCCCeEEEEeCCch
Confidence 44568999998 999999999998 5777 9999988654
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=93.02 E-value=0.06 Score=42.51 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=30.5
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
+|||+||+|-+|...++.+. ..|.+|+++++++.+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~-----~~Ga~Vi~~~~~~~~ 183 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLH-----KLGYQVAAVSGREST 183 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHH-----HTTCCEEEEESCGGG
T ss_pred eEEEECCCcHHHHHHHHHHH-----HcCCEEEEEeCCHHH
Confidence 49999999999999999888 689999999987543
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=93.02 E-value=0.11 Score=40.62 Aligned_cols=35 Identities=14% Similarity=0.023 Sum_probs=29.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
.+++++|+|+ |-+|++++..|. ..|. +|+.++|+.
T Consensus 119 ~~k~~lvlGa-Gg~~~aia~~L~-----~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGA-GGAVRGALLPFL-----QAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHH-----HTCCSEEEEECSCH
T ss_pred cCCEEEEECc-cHHHHHHHHHHH-----HcCCCEEEEEeCCH
Confidence 4689999997 669999999999 6886 898888864
|
| >2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A* | Back alignment and structure |
|---|
Probab=93.01 E-value=0.17 Score=40.91 Aligned_cols=37 Identities=27% Similarity=0.270 Sum_probs=31.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+..+|+|.| .|..|..++..|. ..|++|+.+.|.+.
T Consensus 24 ~~~~dV~IVG-aG~aGl~~A~~L~-----~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 24 LSDKNVAIIG-GGPVGLTMAKLLQ-----QNGIDVSVYERDND 60 (398)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEEECSSS
T ss_pred cCCCCEEEEC-CCHHHHHHHHHHH-----HCCCCEEEEeCCCC
Confidence 3446899999 5899999999999 68999999998754
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=92.96 E-value=0.071 Score=41.85 Aligned_cols=37 Identities=22% Similarity=0.188 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~ 50 (176)
.+++++|+|+ |-+|++++..|. ..|. +|+.++|+..+
T Consensus 116 ~~k~vlvlGa-Gg~g~aia~~L~-----~~G~~~v~v~~R~~~~ 153 (277)
T 3don_A 116 EDAYILILGA-GGASKGIANELY-----KIVRPTLTVANRTMSR 153 (277)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHH-----TTCCSCCEEECSCGGG
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-----HCCCCEEEEEeCCHHH
Confidence 3578999997 679999999999 6898 89999997644
|
| >3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O | Back alignment and structure |
|---|
Probab=92.94 E-value=0.12 Score=41.64 Aligned_cols=34 Identities=18% Similarity=0.069 Sum_probs=27.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
|+.+|.|.|+ |.||+.+++.|.+ ..+.+|.++.-
T Consensus 2 m~ikVgI~G~-GrIGr~l~R~l~~----~p~vevvaI~d 35 (337)
T 3e5r_O 2 GKIKIGINGF-GRIGRLVARVALQ----SEDVELVAVND 35 (337)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHT----CSSEEEEEEEC
T ss_pred CceEEEEECc-CHHHHHHHHHHhC----CCCeEEEEEEC
Confidence 4468999999 9999999999984 45688877753
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=92.92 E-value=0.085 Score=40.16 Aligned_cols=35 Identities=11% Similarity=0.186 Sum_probs=30.1
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc----EEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW----KVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~----~V~~l~R~~~ 49 (176)
+++|.|.| .|.+|+.+++.|. ..|+ +|++.+|++.
T Consensus 2 ~~~i~iIG-~G~mG~~~a~~l~-----~~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 2 DKQIGFIG-CGNMGMAMIGGMI-----NKNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHH-----HTTSSCGGGEEEECSCHH
T ss_pred CCeEEEEC-ccHHHHHHHHHHH-----hCCCCCCCeEEEEeCCHH
Confidence 36799998 8999999999999 6888 8999988753
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=92.90 E-value=0.098 Score=41.65 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=28.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~ 48 (176)
+.+||.|+|+ |.+|..++..|+ ..+. +|+.++++.
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~-----~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALM-----NQGIADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHH-----HHTCCSEEEEECSSH
T ss_pred CCCEEEEECc-CHHHHHHHHHHH-----hCCCCCEEEEEeCCc
Confidence 3468999998 999999999998 4453 799988764
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=92.89 E-value=0.1 Score=42.35 Aligned_cols=35 Identities=14% Similarity=0.083 Sum_probs=31.1
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+++|.|.| .|.+|..++..|+ ..|++|++++|++.
T Consensus 22 ~mkIgiIG-lG~mG~~~A~~L~-----~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 22 SMQIGMIG-LGRMGADMVRRLR-----KGGHECVVYDLNVN 56 (358)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred CCEEEEEC-chHHHHHHHHHHH-----hCCCEEEEEeCCHH
Confidence 47899998 7999999999999 79999999998753
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=92.89 E-value=0.089 Score=42.24 Aligned_cols=37 Identities=19% Similarity=0.118 Sum_probs=31.5
Q ss_pred CC-CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PK-SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~-~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+ .+|||+||+|-+|..+++.+. ..|.+|++++++..
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak-----~~Ga~vi~~~~~~~ 203 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGK-----LLNFNSISVIRDRP 203 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHH-----HHTCEEEEEECCCT
T ss_pred CCCcEEEECCCCcHHHHHHHHHHH-----HCCCEEEEEecCcc
Confidence 45 799999999999999998887 68899999887654
|
| >2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans} | Back alignment and structure |
|---|
Probab=92.87 E-value=0.071 Score=44.34 Aligned_cols=38 Identities=8% Similarity=0.036 Sum_probs=31.0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 5 ~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|.++|||+|+ |.++..+++.+. +.|++|++++..+
T Consensus 2 ~~~~~k~ILI~g~-g~~~~~i~~a~~-----~~G~~vv~v~~~~ 39 (461)
T 2dzd_A 2 ETRRIRKVLVANR-GEIAIRVFRACT-----ELGIRTVAIYSKE 39 (461)
T ss_dssp -CCCCSEEEECSC-HHHHHHHHHHHH-----HHTCEEEEEECGG
T ss_pred CCCcCcEEEEECC-cHHHHHHHHHHH-----HcCCEEEEEECCc
Confidence 4456689999986 779999999999 7999999987643
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=92.85 E-value=0.09 Score=43.80 Aligned_cols=36 Identities=17% Similarity=0.086 Sum_probs=31.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+|||+||+|-||...++.+. ..|.+|+++++++
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak-----~~Ga~vi~~~~~~ 263 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFAL-----AGGANPICVVSSP 263 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCeEEEEECCH
Confidence 46799999999999999999888 6899999988754
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=92.82 E-value=0.15 Score=38.91 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=29.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++|.|.| .|.+|+.+++.|. ..|++|.+++|++
T Consensus 4 m~i~iiG-~G~mG~~~a~~l~-----~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIG-VGKMASAIIKGLK-----QTPHELIISGSSL 36 (259)
T ss_dssp CEEEEEC-CSHHHHHHHHHHT-----TSSCEEEEECSSH
T ss_pred cEEEEEC-CCHHHHHHHHHHH-----hCCCeEEEECCCH
Confidence 5899999 7999999999999 6789999888864
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=92.79 E-value=0.11 Score=41.49 Aligned_cols=69 Identities=19% Similarity=0.228 Sum_probs=49.9
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC--CCC---------------CC------C-------CCc
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP--PPG---------------WF------P-------TAL 57 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~--~~~---------------~~------~-------~~~ 57 (176)
.++|.|+|+ |.+|+.++..|+ ..|+ +|+.+++.+ ... .. . .+.
T Consensus 8 ~~kv~ViGa-G~vG~~ia~~l~-----~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDv 81 (315)
T 3tl2_A 8 RKKVSVIGA-GFTGATTAFLLA-----QKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDV 81 (315)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCE
Confidence 468999996 999999999999 6788 999999873 100 00 0 011
Q ss_pred c----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 58 V----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 58 v----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
+ ..+...++..|+...+.+.+.+.+.
T Consensus 82 VIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~ 117 (315)
T 3tl2_A 82 VVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH 117 (315)
T ss_dssp EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 1134567888999999999999887
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=92.78 E-value=0.16 Score=40.72 Aligned_cols=37 Identities=30% Similarity=0.314 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..++++.|.|. |.||+.+++.|. ..|++|++.+|+..
T Consensus 153 l~g~~vgIIG~-G~iG~~iA~~l~-----~~G~~V~~~d~~~~ 189 (330)
T 2gcg_A 153 LTQSTVGIIGL-GRIGQAIARRLK-----PFGVQRFLYTGRQP 189 (330)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHG-----GGTCCEEEEESSSC
T ss_pred CCCCEEEEECc-CHHHHHHHHHHH-----HCCCEEEEECCCCc
Confidence 35689999985 999999999999 78999999998754
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=92.78 E-value=0.1 Score=41.21 Aligned_cols=33 Identities=21% Similarity=0.120 Sum_probs=29.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~ 48 (176)
+||.|+|+ |.+|..++..|. ..|+ +|+.++++.
T Consensus 1 mkI~VIGa-G~vG~~la~~la-----~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALV-----LRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HTTCCSEEEEECSSH
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCCCEEEEEeCCH
Confidence 47999998 999999999998 6788 899998764
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=92.74 E-value=0.13 Score=41.15 Aligned_cols=35 Identities=9% Similarity=0.104 Sum_probs=30.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
.++++||+|+ |-+|++++..|. ..|. +|+.+.|++
T Consensus 147 ~gk~~lVlGA-GGaaraia~~L~-----~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 147 RGKTMVLLGA-GGAATAIGAQAA-----IEGIKEIKLFNRKD 182 (312)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCSEEEEEECSS
T ss_pred CCCEEEEECc-CHHHHHHHHHHH-----HcCCCEEEEEECCC
Confidence 4689999997 779999999999 6888 799888873
|
| >3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A | Back alignment and structure |
|---|
Probab=92.69 E-value=0.079 Score=41.15 Aligned_cols=36 Identities=31% Similarity=0.438 Sum_probs=29.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCC--CcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~ 48 (176)
|..++|.|.| .|.+|+.++..|. .. +++|++++|++
T Consensus 4 M~~~~I~iIG-~G~mG~~~a~~l~-----~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 4 MEEKTIYIAG-LGLIGASLALGIK-----RDHPHYKIVGYNRSD 41 (290)
T ss_dssp GCCCEEEEEC-CSHHHHHHHHHHH-----HHCTTSEEEEECSSH
T ss_pred cccceEEEEe-eCHHHHHHHHHHH-----hCCCCcEEEEEcCCH
Confidence 4356899999 8999999999998 44 68999998864
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=92.67 E-value=0.14 Score=41.05 Aligned_cols=71 Identities=14% Similarity=-0.016 Sum_probs=49.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCCC--------C-------C-C------------CCc
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPG--------W-------F-P------------TAL 57 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~--------~-------~-~------------~~~ 57 (176)
|..+||.|+|+ |.+|+.++..|+ ..+. +|+.+++.+... . . . .+.
T Consensus 3 m~~~kI~iiGa-G~vG~~~a~~l~-----~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDv 76 (321)
T 3p7m_A 3 MARKKITLVGA-GNIGGTLAHLAL-----IKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDV 76 (321)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHH-----HTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHH-----hCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCE
Confidence 44578999994 999999999998 4666 899998865320 0 0 0 011
Q ss_pred c----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 58 V----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 58 v----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
+ ..+...++..|+...+.+++.+.+.
T Consensus 77 VIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~ 112 (321)
T 3p7m_A 77 VIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHN 112 (321)
T ss_dssp EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHH
Confidence 1 1123456778998888999998887
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=92.67 E-value=0.12 Score=40.96 Aligned_cols=36 Identities=17% Similarity=0.042 Sum_probs=29.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|+|+ |.+|..++..|... ..|++|+.+++++.
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~---~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEK---QLARELVLLDVVEG 36 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT---TCCSEEEEECSSSS
T ss_pred CEEEEECC-CHHHHHHHHHHHhC---CCCCEEEEEeCChh
Confidence 47999998 99999999999830 13799999998753
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=92.55 E-value=0.11 Score=41.64 Aligned_cols=35 Identities=26% Similarity=0.202 Sum_probs=30.0
Q ss_pred CCe-EEEEcC-C-----------------hHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSV-ALIIGV-T-----------------GISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~-vLVtGa-t-----------------GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++ ||||+| | |-.|.+++++++ ..|++|+.+.|..
T Consensus 36 gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~-----~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 36 GRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFL-----AAGYGVLFLYRAR 89 (313)
T ss_dssp TCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHH-----HTTCEEEEEEETT
T ss_pred CCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHH-----HCCCEEEEEecCC
Confidence 455 999855 6 999999999999 7999999999854
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=92.50 E-value=0.12 Score=40.86 Aligned_cols=35 Identities=23% Similarity=0.114 Sum_probs=30.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+.+|||+||+|-+|...++.+. ..|.+|+++++.
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~-----~~Ga~vi~~~~~ 186 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAK-----QKGTTVITTASK 186 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEECH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-----HcCCEEEEEecc
Confidence 46799999999999999999888 689999988754
|
| >2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* | Back alignment and structure |
|---|
Probab=92.47 E-value=0.1 Score=41.47 Aligned_cols=35 Identities=17% Similarity=0.242 Sum_probs=30.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCC----cEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP----WKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g----~~V~~l~R~~~ 49 (176)
+++|.|.|+ |-+|+.++..|. ..| ++|+.++|++.
T Consensus 22 ~mkI~iIG~-G~mG~ala~~L~-----~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 22 SMSVGFIGA-GQLAFALAKGFT-----AAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCCEEEESC-SHHHHHHHHHHH-----HTTSSCGGGEEEECSCTT
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----HCCCCCcceEEEECCCcc
Confidence 468999995 999999999999 677 89999998764
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=92.46 E-value=0.08 Score=43.87 Aligned_cols=35 Identities=23% Similarity=0.171 Sum_probs=30.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+++|+|+|. |-+|+.|++.|. ..|++|+++++++.
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~-----~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLL-----SSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHH-----HTTCCEEEEECCHH
T ss_pred CCeEEEECC-CHHHHHHHHHHH-----HCCCCEEEEECCHH
Confidence 457999996 899999999999 78999999998753
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=92.44 E-value=0.16 Score=40.01 Aligned_cols=37 Identities=24% Similarity=0.202 Sum_probs=32.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..+++++|.|+++.+|+.++..|+ ..|..|+.+.|+.
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~-----~~gAtVtv~h~~t 194 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLL-----NAGATVSVCHIKT 194 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHH-----HTTCEEEEECTTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEeCCc
Confidence 467999999999999999999999 6899999887653
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=92.40 E-value=0.098 Score=43.43 Aligned_cols=33 Identities=24% Similarity=0.248 Sum_probs=29.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|.|.| +|.+|..++..|. ..|++|++++|++
T Consensus 1 mkI~VIG-~G~vG~~~A~~la-----~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLS-----ARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHH-----HTTCEEEEECSCH
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 3789998 7999999999999 6899999999864
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=92.39 E-value=0.11 Score=40.49 Aligned_cols=33 Identities=24% Similarity=0.151 Sum_probs=29.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++|.|.| .|.+|+.++..|. ..|++|++++|++
T Consensus 5 ~~i~iiG-~G~~G~~~a~~l~-----~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIG-LGAMGKPMAINLL-----KEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEEC-CCTTHHHHHHHHH-----HTTCEEEEECSSH
T ss_pred CEEEEEC-ccHHHHHHHHHHH-----HCCCeEEEEeCCH
Confidence 5899998 6999999999999 6899999998864
|
| >3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B* | Back alignment and structure |
|---|
Probab=92.36 E-value=0.14 Score=41.83 Aligned_cols=30 Identities=13% Similarity=0.031 Sum_probs=27.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCC-CCcEEEEEe
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPG-SPWKVYGAA 45 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~-~g~~V~~l~ 45 (176)
|+|.|.|+ |.+|..++..|. . .|++|+.++
T Consensus 3 mkI~ViGa-G~~G~~~a~~La-----~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGG-GNGAHTLSGLAA-----SRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECC-SHHHHHHHHHHT-----TSTTEEEEEEC
T ss_pred ceEEEECC-CHHHHHHHHHHH-----hCCCCEEEEEe
Confidence 58999996 999999999998 5 599999998
|
| >3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=92.34 E-value=0.18 Score=39.84 Aligned_cols=34 Identities=32% Similarity=0.171 Sum_probs=28.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|+|+|.| .|-+|+.++..|. .|++|+.++|++
T Consensus 1 M~mkI~IiG-aGa~G~~~a~~L~------~g~~V~~~~r~~ 34 (307)
T 3ego_A 1 MSLKIGIIG-GGSVGLLCAYYLS------LYHDVTVVTRRQ 34 (307)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHH------TTSEEEEECSCH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHh------cCCceEEEECCH
Confidence 457899998 5889999999998 578999999875
|
| >3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A* | Back alignment and structure |
|---|
Probab=92.33 E-value=0.092 Score=42.09 Aligned_cols=36 Identities=25% Similarity=0.315 Sum_probs=29.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+...+|.|.|+ |.+|+.++..++ ..|++|+.++.++
T Consensus 4 p~~~~VaViGa-G~MG~giA~~~a-----~~G~~V~l~D~~~ 39 (319)
T 3ado_A 4 PAAGDVLIVGS-GLVGRSWAMLFA-----SGGFRVKLYDIEP 39 (319)
T ss_dssp ---CEEEEECC-SHHHHHHHHHHH-----HTTCCEEEECSCH
T ss_pred CCCCeEEEECC-cHHHHHHHHHHH-----hCCCeEEEEECCH
Confidence 34568999995 999999999999 6999999998764
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=92.25 E-value=0.22 Score=39.95 Aligned_cols=35 Identities=29% Similarity=0.396 Sum_probs=30.1
Q ss_pred CCeEEEEcCChHHHHHH-HHHh-hCCCCCCCCcE-EEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSL-AEAL-KNPTTPGSPWK-VYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l-~~~L-~~~~~~~~g~~-V~~l~R~~~ 49 (176)
..+|||+|+ |-+|... ++.+ . ..|.+ |+++++++.
T Consensus 173 ~~~VlV~Ga-G~vG~~a~iqla~k-----~~Ga~~Vi~~~~~~~ 210 (357)
T 2b5w_A 173 PSSAFVLGN-GSLGLLTLAMLKVD-----DKGYENLYCLGRRDR 210 (357)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHC-----TTCCCEEEEEECCCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHH-----HcCCcEEEEEeCCcc
Confidence 379999999 9999999 8887 6 68887 999998765
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=92.25 E-value=0.1 Score=41.32 Aligned_cols=68 Identities=12% Similarity=0.031 Sum_probs=47.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCC----------------CC------------CCCcc-
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG----------------WF------------PTALV- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~----------------~~------------~~~~v- 58 (176)
|||-|+|+ |.||+.++..|+ .++ -++..++...... .. ..+.+
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~-----~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVv 74 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCL-----LNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIV 74 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHH-----hCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEE
Confidence 57999995 999999999887 333 3688887653110 00 00111
Q ss_pred ---------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ---------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ---------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
-.+...++..|....+.+.+++.+.
T Consensus 75 itAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~ 108 (294)
T 2x0j_A 75 VTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN 108 (294)
T ss_dssp ECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 2255678999999999999999998
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=92.25 E-value=0.17 Score=40.45 Aligned_cols=37 Identities=16% Similarity=-0.023 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+.+|||+|+ |-+|...++.+. ..|.+|+++++++.+
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~-----~~Ga~Vi~~~~~~~~ 212 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAV-----AMGAEVSVFARNEHK 212 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHH-----HTTCEEEEECSSSTT
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-----HCCCeEEEEeCCHHH
Confidence 4679999997 899999998888 688999999987654
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=92.24 E-value=0.04 Score=44.39 Aligned_cols=21 Identities=24% Similarity=0.452 Sum_probs=19.6
Q ss_pred CeEEEEcCChHHHHHHHHHhh
Q 030483 10 SVALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~ 30 (176)
++|.|.||+|.+|+.|++.|.
T Consensus 1 mkVaI~GAtG~iG~~llr~L~ 21 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLE 21 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH
Confidence 379999999999999999998
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=92.21 E-value=0.16 Score=39.85 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=31.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..+++++|.|+ |-+|+.+++.|. ..|.+|++.+|++
T Consensus 155 l~g~~v~IiG~-G~iG~~~a~~l~-----~~G~~V~~~d~~~ 190 (300)
T 2rir_A 155 IHGSQVAVLGL-GRTGMTIARTFA-----ALGANVKVGARSS 190 (300)
T ss_dssp STTSEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESSH
T ss_pred CCCCEEEEEcc-cHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 35689999995 899999999999 7899999999864
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=92.18 E-value=0.12 Score=41.31 Aligned_cols=35 Identities=26% Similarity=0.309 Sum_probs=30.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
.+.+|||+|+ |-+|..+++.+. ..|. +|+++++++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~-----~~Ga~~Vi~~~~~~ 199 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVR-----ASGAGPILVSDPNP 199 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHH-----HTTCCSEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HcCCCEEEEECCCH
Confidence 4678999999 999999999888 6898 899998864
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=92.17 E-value=0.12 Score=41.61 Aligned_cols=37 Identities=24% Similarity=0.332 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCC-CCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPG-SPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~-~g~~V~~l~R~~~ 49 (176)
.+.+|||+||+|-+|...++.+. . .|.+|+++++++.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak-----~~~g~~Vi~~~~~~~ 208 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIAR-----QRTDLTVIATASRPE 208 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHH-----HHCCSEEEEECSSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HhcCCEEEEEeCCHH
Confidence 45689999999999999888776 4 6889999988653
|
| >1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* | Back alignment and structure |
|---|
Probab=92.15 E-value=0.17 Score=41.62 Aligned_cols=32 Identities=28% Similarity=0.198 Sum_probs=28.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|.|.|+ |.+|..++..|. . |++|++++|++
T Consensus 1 MkI~VIG~-G~vG~~~A~~La-----~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGS-GYVGLSLGVLLS-----L-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECC-SHHHHHHHHHHT-----T-TSEEEEECSCH
T ss_pred CEEEEECC-CHHHHHHHHHHh-----C-CCEEEEEECCH
Confidence 37899985 999999999999 7 99999999864
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=92.15 E-value=0.18 Score=35.21 Aligned_cols=35 Identities=11% Similarity=0.109 Sum_probs=30.6
Q ss_pred CCeEEEEcCC---hHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVT---GISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGat---GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++|.|.|+| |-+|..+++.|+ +.||+|+.++++.
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~-----~~G~~V~~vnp~~ 51 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLL-----SKGFEVLPVNPNY 51 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHH-----HTTCEEEEECTTC
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHH-----HCCCEEEEeCCCC
Confidence 4689999997 899999999999 6899988887764
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=92.14 E-value=0.13 Score=41.33 Aligned_cols=70 Identities=23% Similarity=0.194 Sum_probs=40.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCC----------C---CCC-------------CCcc-
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPP----------G---WFP-------------TALV- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~----------~---~~~-------------~~~v- 58 (176)
..+||.|+|+ |.+|+.++..|+ ..|. +++.+++.... . ... .+.+
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~-----~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVv 81 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMV-----LQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVV 81 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-----HHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----hCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEE
Confidence 4578999996 999999999998 4665 78888875321 0 000 0111
Q ss_pred -----c----CcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 -----Q----ESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 -----~----~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
. .+...++..|+...+.+.+.+.+.
T Consensus 82 i~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~ 115 (326)
T 3vku_A 82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS 115 (326)
T ss_dssp ECCCCC----------------CHHHHHHHHHTT
T ss_pred ECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 123346778888888999999887
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=92.14 E-value=0.1 Score=41.19 Aligned_cols=31 Identities=23% Similarity=0.215 Sum_probs=28.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
|+|.|.|+ |.+|+.++..|. ..|++|+.++|
T Consensus 1 m~I~iiG~-G~mG~~~a~~L~-----~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGA-GAMGSALSVPLV-----DNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESC-CHHHHHHHHHHH-----HHCCEEEEECC
T ss_pred CEEEEECc-CHHHHHHHHHHH-----hCCCeEEEEEc
Confidence 37899985 999999999999 68999999998
|
| >1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=92.13 E-value=0.15 Score=40.60 Aligned_cols=35 Identities=26% Similarity=0.243 Sum_probs=30.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|.++|.|.| .|-+|+.++..|. ..|++|+.++|++
T Consensus 13 ~~~kI~iIG-~G~mG~ala~~L~-----~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLG-AGSWGTVFAQMLH-----ENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSH
T ss_pred cCCcEEEEC-cCHHHHHHHHHHH-----hCCCeEEEEeCCH
Confidence 557899998 6889999999999 6899999998864
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=92.07 E-value=0.14 Score=43.45 Aligned_cols=35 Identities=29% Similarity=0.256 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++++|||+. -||..+++.|. ..|.+|++.+|++
T Consensus 264 ~GKtVvVtGaG-gIG~aiA~~La-----a~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYG-DVGKGCAAALK-----QAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHH-----HTTCEEEEECSCH
T ss_pred cCCEEEEECCC-HHHHHHHHHHH-----HCCCEEEEEcCCH
Confidence 57899999986 79999999999 7999999988864
|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
Probab=92.05 E-value=0.29 Score=39.47 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=30.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++++|||+|+ |.+|+.+++.+. ..|++|+.++..+.
T Consensus 10 ~~~~ili~g~-g~~~~~~~~a~~-----~~G~~v~~~~~~~~ 45 (391)
T 1kjq_A 10 AATRVMLLGS-GELGKEVAIECQ-----RLGVEVIAVDRYAD 45 (391)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHH-----TTTCEEEEEESSTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HcCCEEEEEECCCC
Confidence 3578999987 789999999999 79999999987643
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=92.05 E-value=0.16 Score=40.99 Aligned_cols=36 Identities=25% Similarity=0.192 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+.+|||+|+ |-||..+++.+. ..|.+|+++++++.
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~-----~~Ga~Vi~~~~~~~ 222 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAK-----AFGSKVTVISTSPS 222 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 4578999996 889999999888 68899999998754
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=92.04 E-value=0.11 Score=41.32 Aligned_cols=33 Identities=24% Similarity=0.108 Sum_probs=29.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~ 48 (176)
++|.|+|+ |.+|+.++..|+ ..|+ +|+.++|++
T Consensus 1 mkI~VIGa-G~~G~~la~~l~-----~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALL-----MKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HHTCCSEEEEECSSH
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCCCeEEEEeCCh
Confidence 47999998 999999999999 6888 999998864
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=92.03 E-value=0.12 Score=41.17 Aligned_cols=70 Identities=19% Similarity=0.101 Sum_probs=48.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCC--CCcEEEEEecCCCC---------CCC--C-------C--------Ccc---
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPG--SPWKVYGAARRPPP---------GWF--P-------T--------ALV--- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~---------~~~--~-------~--------~~v--- 58 (176)
|||.|+||+|.+|+.++..|.. . -..+++.+++.+.. ... . . +.+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~----~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ 76 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKT----QLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLIS 76 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH----HSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHh----CCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEe
Confidence 4899999999999999999972 1 22578888876510 000 0 0 111
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+...++..|+...+.+.+++.+.
T Consensus 77 ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~ 108 (312)
T 3hhp_A 77 AGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT 108 (312)
T ss_dssp CSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1134567889999999999999887
|
| >3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=92.03 E-value=0.044 Score=42.01 Aligned_cols=33 Identities=21% Similarity=0.108 Sum_probs=29.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.++|.|.| .|.+|.+|+..|. ..|++|++++|.
T Consensus 6 ~mkI~IIG-~G~~G~sLA~~L~-----~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFD-DGSSTVNMAEKLD-----SVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEEC-CSCCCSCHHHHHH-----HTTCEEEECSSG
T ss_pred CcEEEEEe-eCHHHHHHHHHHH-----HCCCEEEEecCH
Confidence 46899999 5999999999999 689999999885
|
| >2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* | Back alignment and structure |
|---|
Probab=92.01 E-value=0.14 Score=43.24 Aligned_cols=37 Identities=19% Similarity=0.217 Sum_probs=30.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
-|.+++|.|.| .|-+|+.|+..|. +.|++|++.+|++
T Consensus 12 ~~~~~~IgvIG-lG~MG~~lA~~La-----~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 12 HMSKQQIGVVG-MAVMGRNLALNIE-----SRGYTVSIFNRSR 48 (480)
T ss_dssp ---CBSEEEEC-CSHHHHHHHHHHH-----TTTCCEEEECSSH
T ss_pred ccCCCeEEEEc-cHHHHHHHHHHHH-----hCCCeEEEEeCCH
Confidence 35678899998 6999999999999 7899999998864
|
| >1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=91.94 E-value=0.25 Score=41.38 Aligned_cols=35 Identities=23% Similarity=0.348 Sum_probs=30.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..++|.|.|+ |.+|+.++..|. ..|++|+.++|++
T Consensus 36 ~~~kV~VIGa-G~MG~~iA~~la-----~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGL-GTMGRGIAISFA-----RVGISVVAVESDP 70 (463)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-----TTTCEEEEECSSH
T ss_pred CCCEEEEECc-CHHHHHHHHHHH-----hCCCeEEEEECCH
Confidence 3468999985 999999999999 6999999998864
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=91.93 E-value=0.074 Score=41.41 Aligned_cols=35 Identities=26% Similarity=0.308 Sum_probs=30.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
++|.|.| .|.+|+.+++.|. ..|++|++++|++..
T Consensus 2 ~~I~iiG-~G~mG~~~a~~l~-----~~G~~V~~~dr~~~~ 36 (287)
T 3pdu_A 2 TTYGFLG-LGIMGGPMAANLV-----RAGFDVTVWNRNPAK 36 (287)
T ss_dssp CCEEEEC-CSTTHHHHHHHHH-----HHTCCEEEECSSGGG
T ss_pred CeEEEEc-cCHHHHHHHHHHH-----HCCCeEEEEcCCHHH
Confidence 4788887 7999999999999 689999999997653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 176 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.92 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.92 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.91 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.91 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.9 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.88 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.87 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.87 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.87 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.86 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.86 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.85 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.84 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.81 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.81 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.79 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.79 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.79 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.78 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.77 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.77 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.77 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.76 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.68 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.68 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.61 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.58 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.55 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.53 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.41 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 98.94 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.92 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.8 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.79 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.75 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 98.75 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 98.72 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 98.7 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.7 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 98.7 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.7 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 98.69 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.69 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 98.67 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 98.67 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.67 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.66 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.66 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.65 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.65 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 98.63 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.63 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.62 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 98.62 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 98.61 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 98.6 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 98.6 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.6 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.6 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.59 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 98.59 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 98.58 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 98.57 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.57 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.57 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.55 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 98.54 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.54 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 98.53 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.52 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.52 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.5 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.5 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 98.49 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.48 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.48 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.47 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.46 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.45 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.43 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.36 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.35 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.34 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.34 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.33 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 98.33 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 98.21 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.04 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 97.98 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 97.93 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 97.88 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.88 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 97.75 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.66 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.48 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 97.41 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 97.4 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 97.37 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.36 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.21 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 97.16 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.08 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 96.64 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.6 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 96.56 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 96.54 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.51 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.47 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.25 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 96.24 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.21 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.2 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.19 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.19 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.17 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 96.03 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 95.93 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 95.91 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 95.91 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 95.87 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 95.84 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 95.82 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 95.71 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 95.57 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 95.57 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 95.5 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.45 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 95.45 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 95.43 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 95.42 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 95.41 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 95.39 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 95.38 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 95.37 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 95.37 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 95.3 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 95.25 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 95.1 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 95.01 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 95.0 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 94.93 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 94.82 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 94.81 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 94.72 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 94.69 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 94.66 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 94.63 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 94.59 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 94.48 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 94.42 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 94.37 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 94.37 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 94.36 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 94.34 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 94.33 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 94.33 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 94.32 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 94.32 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 94.24 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 94.23 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 94.22 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 94.22 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 94.21 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 94.16 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 94.08 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 94.01 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 93.96 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 93.84 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 93.76 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 93.68 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 93.56 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 93.3 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 93.27 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 93.17 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 93.15 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 93.14 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 93.11 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 93.1 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 92.9 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 92.83 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 92.82 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 92.82 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 92.74 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 92.7 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 92.62 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 92.59 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 92.56 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 92.46 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 92.44 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 92.33 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 92.23 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 92.13 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 92.12 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 92.03 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 91.93 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 91.71 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 91.69 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 91.45 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 91.38 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 91.34 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 91.3 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 91.23 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 91.22 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 91.2 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 91.11 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 91.11 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 91.04 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 90.96 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 90.82 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 90.81 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 90.51 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 90.43 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 90.43 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 89.92 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 89.83 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 89.75 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 89.72 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 89.61 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 89.34 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 89.33 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 89.12 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 88.85 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 88.71 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 88.56 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 88.46 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 88.37 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 88.18 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 88.09 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 88.07 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 88.06 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 87.91 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 87.91 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 87.33 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 87.18 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 87.0 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 86.91 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 86.86 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 86.66 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 86.39 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 86.12 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 85.96 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 85.65 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 85.31 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 85.03 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 84.91 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 84.77 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 84.6 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 84.59 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 84.58 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 84.05 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 83.84 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 83.7 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 83.66 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 83.38 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 83.37 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 83.36 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 82.93 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 82.86 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 82.79 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 82.39 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 81.84 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 81.66 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 81.6 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 81.42 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 80.96 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 80.77 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 80.19 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 80.11 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=4.8e-25 Score=178.86 Aligned_cols=135 Identities=23% Similarity=0.120 Sum_probs=100.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------------C-CC------C-------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------------W-FP------T------------- 55 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------------~-~~------~------------- 55 (176)
|+|||||||||||++|+++|+ +.||+|++++|..... . .. +
T Consensus 2 K~vLITGatGfiGs~lv~~Ll-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLL-----EKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILRE 76 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-----HCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhc
Confidence 789999999999999999999 7899999999954210 0 00 0
Q ss_pred ---Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCc
Q 030483 56 ---ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 120 (176)
Q Consensus 56 ---~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~ 120 (176)
+.| ..++.+.+++|+.+|.||+++|++.. ..++.+|+++||+.+||.+ ...
T Consensus 77 ~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~--~~~~~r~i~~SS~~vYG~~------------~~~ 142 (357)
T d1db3a_ 77 VQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG--LEKKTRFYQASTSELYGLV------------QEI 142 (357)
T ss_dssp HCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT--CTTTCEEEEEEEGGGGTTC------------CSS
T ss_pred cCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEEchhhhCCC------------CCC
Confidence 001 34667789999999999999999860 2245689999999999853 246
Q ss_pred cccCCCCCCCCCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCCC
Q 030483 121 PFKEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 121 p~~E~~~~~~~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~ 165 (176)
|++|+++.. |...|...|+..| +.++++++++||++||||+.+
T Consensus 143 ~~~E~~~~~--P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~ 192 (357)
T d1db3a_ 143 PQKETTPFY--PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRG 192 (357)
T ss_dssp SBCTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSC
T ss_pred CcCCCCCCC--CCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCC
Confidence 899999865 4444554444433 356899999999999999753
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=4.6e-25 Score=175.06 Aligned_cols=135 Identities=14% Similarity=0.134 Sum_probs=99.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCC------------CCcc-------------cCcH
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP------------TALV-------------QESE 62 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~------------~~~v-------------~~~~ 62 (176)
.+|||||||||||||++|+++|+ ++|+.|++++++..-.... .+.+ ..++
T Consensus 1 ~kkkIlITG~tGfiG~~l~~~L~-----~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~ 75 (315)
T d1e6ua_ 1 AKQRVFIAGHRGMVGSAIRRQLE-----QRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYP 75 (315)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHT-----TCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-----HCcCEEEEecCchhccccCHHHHHHHHhhcCCCEEEEcchhccccccchhhH
Confidence 36899999999999999999999 7999988876554321100 0111 2245
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCC---CCcchHHHH
Q 030483 63 EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP---FPNFYYELE 139 (176)
Q Consensus 63 ~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~---~~~~y~~~e 139 (176)
.+.+++|+.+|.|++++|.+. ++++|||+||.++||... ..|++|+.+... ++...|..+
T Consensus 76 ~~~~~~Nv~gt~~ll~~a~~~-----~v~~~i~~SS~~vyg~~~------------~~~~~E~~~~~~~~~~~~~~Y~~s 138 (315)
T d1e6ua_ 76 ADFIYQNMMIESNIIHAAHQN-----DVNKLLFLGSSCIYPKLA------------KQPMAESELLQGTLEPTNEPYAIA 138 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGGGSCTTC------------CSSBCGGGTTSSCCCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECCceEcCCCC------------CCCccCCccccCCCCCCCCHHHHH
Confidence 567889999999999999998 688999999999998532 456777765431 223345554
Q ss_pred HHHHh-------hCCCceEEEeccCceEeCCC
Q 030483 140 DVSAS-------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 140 ~~~~~-------~~~g~~~~ivRp~~v~G~~~ 164 (176)
|+..| ++.+++++++||++||||+.
T Consensus 139 K~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~ 170 (315)
T d1e6ua_ 139 KIAGIKLCESYNRQYGRDYRSVMPTNLYGPHD 170 (315)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECEEESTTC
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeccEECCCC
Confidence 44433 35689999999999999986
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.91 E-value=2.9e-25 Score=178.51 Aligned_cols=134 Identities=19% Similarity=0.122 Sum_probs=102.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------------CC------C----------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------------FP------T---------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------------~~------~---------- 55 (176)
++.|+|||||||||||++|+++|+ +.||+|++++|...... .. +
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~-----~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~ 88 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLL-----KLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA 88 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHH-----HCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccc
Confidence 356799999999999999999999 79999999987432110 00 0
Q ss_pred ----Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCC
Q 030483 56 ----ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 119 (176)
Q Consensus 56 ----~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~ 119 (176)
..+ ..++...+++|+.++.+++++|.+. ++++++++||+.+||.. ..
T Consensus 89 ~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-----~~~~~i~~SS~~vyg~~------------~~ 151 (341)
T d1sb8a_ 89 CAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-----KVQSFTYAASSSTYGDH------------PG 151 (341)
T ss_dssp HTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGTTC------------CC
T ss_pred cccccccccccccccccccccCccchhheeehhHHHHHHHHHhc-----CCceEEEcccceeeCCC------------CC
Confidence 000 2244667899999999999999988 67899999999999843 24
Q ss_pred ccccCCCCCCCCCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCC
Q 030483 120 VPFKEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 120 ~p~~E~~~~~~~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~ 164 (176)
.|++|+++.. |...|+..|+..| +..+++++++||++||||+.
T Consensus 152 ~~~~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~ 201 (341)
T d1sb8a_ 152 LPKVEDTIGK--PLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQ 201 (341)
T ss_dssp SSBCTTCCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTC
T ss_pred CCccCCCCCC--CCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCc
Confidence 6899999876 3444554444433 45689999999999999986
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=4.4e-24 Score=171.29 Aligned_cols=134 Identities=18% Similarity=0.099 Sum_probs=98.5
Q ss_pred CeE-EEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-----------C-----CCCc---------------
Q 030483 10 SVA-LIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------F-----PTAL--------------- 57 (176)
Q Consensus 10 ~~v-LVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~-----~~~~--------------- 57 (176)
||| ||||||||||+||+++|+ +.||+|++++|...... . ....
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll-----~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 75 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLL-----EKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKII 75 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHH-----HCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHH
Confidence 467 999999999999999999 79999999999653210 0 0000
Q ss_pred -------c------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 58 -------V------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 58 -------v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
+ ..++...+++|+.+|.|++++++++. ..++++++++||.++||.+ .
T Consensus 76 ~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~--~~~~~~~i~~SS~~vyg~~------------~ 141 (347)
T d1t2aa_ 76 NEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG--LINSVKFYQASTSELYGKV------------Q 141 (347)
T ss_dssp HHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CTTTCEEEEEEEGGGTCSC------------S
T ss_pred hhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcC--CCCCcEEEEecchheecCC------------C
Confidence 0 12344567899999999999999871 1234689999999999843 2
Q ss_pred CccccCCCCCCCCCcchHHHHH-----HHHh--hCCCceEEEeccCceEeCCC
Q 030483 119 EVPFKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~~e~-----~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
..|++|+++.. |...|+..| ++.+ +.++++++++||++||||+.
T Consensus 142 ~~~~~E~~~~~--P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~ 192 (347)
T d1t2aa_ 142 EIPQKETTPFY--PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRR 192 (347)
T ss_dssp SSSBCTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred CCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCC
Confidence 46899999865 444454444 3333 35689999999999999975
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.2e-23 Score=167.74 Aligned_cols=134 Identities=18% Similarity=0.132 Sum_probs=96.9
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CCC------------------CCcc------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WFP------------------TALV------ 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~------------------~~~v------ 58 (176)
+|||||||||||||++|+++|+ +.|++|++++|..... +.. .+.|
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~-----~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~ 75 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLM-----MDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASP 75 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSC
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----HCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHcCCCEEEECccc
Confidence 5899999999999999999999 6999999998743211 000 0111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCC---
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL--- 129 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~--- 129 (176)
..++.+.+++|+.++.|++++|++. ++ +++++||.++||.+. ..|++|+....
T Consensus 76 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-----~~-k~I~~SS~~vy~~~~------------~~~~~e~~~~~~~~ 137 (312)
T d2b69a1 76 ASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-----GA-RLLLASTSEVYGDPE------------VHPQSEDYWGHVNP 137 (312)
T ss_dssp CSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-----TC-EEEEEEEGGGGBSCS------------SSSBCTTCCCBCCS
T ss_pred CCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-----CC-cEEEEEChheecCCC------------CCCCCccccCCCCC
Confidence 2356678899999999999999987 44 689999999998542 34555553211
Q ss_pred CCCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCCC
Q 030483 130 PFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 130 ~~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~ 165 (176)
..|...|...|+..| +.++++++++||++||||+..
T Consensus 138 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~ 180 (312)
T d2b69a1 138 IGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMH 180 (312)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCC
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCC
Confidence 124455554444433 456899999999999999863
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.88 E-value=3.9e-22 Score=158.17 Aligned_cols=132 Identities=14% Similarity=0.045 Sum_probs=98.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------CC-------C---------------C-c
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FP-------T---------------A-L 57 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~-------~---------------~-~ 57 (176)
|+|||||||||||++|+++|+ .+||+|++++|...... .. + . .
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll-----~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 75 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLL-----EKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQE 75 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECCCCHHHHHHHHHHH-----HCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccccccc
Confidence 689999999999999999999 68999999999754311 00 0 0 0
Q ss_pred c------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC
Q 030483 58 V------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 58 v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
+ ..++.+.+..|+.++.|+++++++. . ..++|++.||..+||.. ...+.+|+
T Consensus 76 ~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~---~-~~~~~i~~Ss~~~~~~~------------~~~~~~E~ 139 (321)
T d1rpna_ 76 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF---S-PETRFYQASTSEMFGLI------------QAERQDEN 139 (321)
T ss_dssp EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH---C-TTSEEEEEEEGGGGCSC------------SSSSBCTT
T ss_pred cccccccccccccccchHHHHhhhhhchHHHHHHHHHh---C-CCcccccccchhhcCcc------------cCCCCCCC
Confidence 0 3456678899999999999999987 3 34678888888877633 13567888
Q ss_pred CCCCCCCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCC
Q 030483 126 SSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 126 ~~~~~~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~ 164 (176)
++.. |...|+..|+..| ...+++.+++||+++|||..
T Consensus 140 ~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~ 183 (321)
T d1rpna_ 140 TPFY--PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLR 183 (321)
T ss_dssp SCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred CCcc--ccChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCc
Confidence 8765 4445554444433 35689999999999999975
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.87 E-value=3.5e-23 Score=165.12 Aligned_cols=131 Identities=15% Similarity=0.104 Sum_probs=94.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEE------EEEecCCCCC----------CCCC------------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKV------YGAARRPPPG----------WFPT------------------ 55 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V------~~l~R~~~~~----------~~~~------------------ 55 (176)
|||||||||||||++|+++|+ +.||+| +.+++..... ....
T Consensus 1 MkIlItG~tGfIG~~l~~~L~-----~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 75 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLL-----AGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR 75 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHH-----HCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcccc
Confidence 589999999999999999999 677754 4444321110 0000
Q ss_pred --Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcc
Q 030483 56 --ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 56 --~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p 121 (176)
+.| ..+..+.+++|+.++.|++++|.+. ++++++++||.++||.+ ...|
T Consensus 76 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-----~~~~~I~~Ss~~~yg~~------------~~~~ 138 (322)
T d1r6da_ 76 GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-----GVGRVVHVSTNQVYGSI------------DSGS 138 (322)
T ss_dssp TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCCC------------SSSC
T ss_pred ccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-----CCceEEEeecceeecCC------------CCCC
Confidence 000 1234567889999999999999987 57899999999999853 2468
Q ss_pred ccCCCCCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 122 FKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 122 ~~E~~~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
++|+++.. |...|+. |.++.. ++++++++++||++||||+.
T Consensus 139 ~~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~ 186 (322)
T d1r6da_ 139 WTESSPLE--PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQ 186 (322)
T ss_dssp BCTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTC
T ss_pred CCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCC
Confidence 89999876 3333443 444433 46689999999999999986
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.87 E-value=6e-22 Score=159.99 Aligned_cols=139 Identities=14% Similarity=0.093 Sum_probs=98.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCC------------------------CCcc------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP------------------------TALV------ 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~------------------------~~~v------ 58 (176)
+|||||||||||||++|+++|+ ++||+|++++|........ .+.|
T Consensus 15 nMKILVTGgsGfIGs~lv~~L~-----~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~ 89 (363)
T d2c5aa1 15 NLKISITGAGGFIASHIARRLK-----HEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD 89 (363)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----HCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeecccc
Confidence 5789999999999999999999 7999999998765432100 0001
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCC
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF 131 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~ 131 (176)
...+.+.+..|+.++.++++++.+. ++++++++||..+|+.... ...........|+++..
T Consensus 90 ~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-----~vk~~i~~SS~~~~~~~~~-----~~~~~~~~~~~e~~~~~-- 157 (363)
T d2c5aa1 90 MGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-----GIKRFFYASSACIYPEFKQ-----LETTNVSLKESDAWPAE-- 157 (363)
T ss_dssp CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEEEEGGGSCGGGS-----SSSSSCEECGGGGSSBC--
T ss_pred cccccccccccccccccccchhhHHHHhHHhh-----Ccccccccccccccccccc-----ccccccccccccCCcCC--
Confidence 2345667889999999999999998 6899999999999985421 00000112334444443
Q ss_pred CcchHHHHHHHHh-------hCCCceEEEeccCceEeCCC
Q 030483 132 PNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 132 ~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~ 164 (176)
|...|+.+|+..| +..+++++++||++||||..
T Consensus 158 p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~ 197 (363)
T d2c5aa1 158 PQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFG 197 (363)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCC
Confidence 3444554444333 35689999999999999986
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=6.9e-22 Score=158.58 Aligned_cols=133 Identities=14% Similarity=0.107 Sum_probs=94.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-----------CCC----------------------C
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FPT----------------------A 56 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~~----------------------~ 56 (176)
|||||||||||||++|+++|+ +.|++|++++|...... ... +
T Consensus 1 MKiLItG~tGfIG~~l~~~L~-----~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 75 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLL-----QNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAID 75 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCS
T ss_pred CEEEEECCCCHHHHHHHHHHH-----HCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCC
Confidence 579999999999999999999 78999999987322110 000 1
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
.| ..++.+.+++|+.+|.|+|++|++. ++++++++||.++|+... ..+..|
T Consensus 76 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-----~v~~~i~~Ss~~vy~~~~------------~~~~~e 138 (338)
T d1udca_ 76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNFIFSSSATVYGDQP------------KIPYVE 138 (338)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSCC------------SSSBCT
T ss_pred EEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-----CCCEEEecCcceEEcccc------------cccccc
Confidence 11 1245678899999999999999998 689999999999997431 233445
Q ss_pred CCCCCCCCcchHH----HHHHHHh---hCCCceEEEeccCceEeCCC
Q 030483 125 DSSRLPFPNFYYE----LEDVSAS---YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 125 ~~~~~~~~~~y~~----~e~~~~~---~~~g~~~~ivRp~~v~G~~~ 164 (176)
+++...+...|.. .|+++.+ +..+++++++||+++|||+.
T Consensus 139 ~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~ 185 (338)
T d1udca_ 139 SFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHP 185 (338)
T ss_dssp TSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCT
T ss_pred ccccCCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccC
Confidence 5443212233332 3444433 35689999999999999976
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=6.1e-21 Score=153.07 Aligned_cols=136 Identities=13% Similarity=0.021 Sum_probs=93.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---C--------------CCC-----C---------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W--------------FPT-----A--------- 56 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~--------------~~~-----~--------- 56 (176)
|.|||||||||||||++|+++|+ +.||+|++++|..... . ... +
T Consensus 1 M~kKILITG~tGfIGs~lv~~Ll-----~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~ 75 (346)
T d1ek6a_ 1 MAEKVLVTGGAGYIGSHTVLELL-----EAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQR 75 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHH-----HTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHH-----HCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccc
Confidence 56899999999999999999999 7899999997632210 0 000 0
Q ss_pred --------cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCC
Q 030483 57 --------LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 116 (176)
Q Consensus 57 --------~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~ 116 (176)
.+ ..++.+.+++|+.++.++++++++. ++++|++.||+.+|+...
T Consensus 76 ~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-----~v~~~i~~ss~~~~~~~~---------- 140 (346)
T d1ek6a_ 76 LFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-----GVKNLVFSSSATVYGNPQ---------- 140 (346)
T ss_dssp HHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCSCS----------
T ss_pred cccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-----Ccccccccccceeeeccc----------
Confidence 00 1245677899999999999999987 688999999999997432
Q ss_pred CCCccccCCCCCCCCCcchHHH-----HHHHHh---hCCCceEEEeccCceEeCCCCC
Q 030483 117 PYEVPFKEDSSRLPFPNFYYEL-----EDVSAS---YSPAITYSVHRSSVIIGASPRS 166 (176)
Q Consensus 117 ~~~~p~~E~~~~~~~~~~y~~~-----e~~~~~---~~~g~~~~ivRp~~v~G~~~~~ 166 (176)
..+..++.+.. .+...|.. |+.+.+ ...+++++++||+++|||...+
T Consensus 141 --~~~~~~~~~~~-~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~ 195 (346)
T d1ek6a_ 141 --YLPLDEAHPTG-GCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASG 195 (346)
T ss_dssp --SSSBCTTSCCC-CCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTS
T ss_pred --ccccccccccc-ccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCC
Confidence 11111222211 22333333 333333 3568999999999999997643
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.86 E-value=1.9e-21 Score=156.46 Aligned_cols=137 Identities=15% Similarity=0.157 Sum_probs=99.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-----------CCC----------------------C
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FPT----------------------A 56 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~~----------------------~ 56 (176)
|.|||||||||||+||+++|+ ++|++|++++|...... ... +
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll-----~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d 76 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELI-----ENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKID 76 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHH-----HCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCC
Confidence 569999999999999999999 79999999976432210 000 0
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
.| ..++.....+|+.++.+++++|++. ++++++++||..+||.... .+...+++|
T Consensus 77 ~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-----~i~~~i~~SS~~vyg~~~~--------~~~~~~~~e 143 (347)
T d1z45a2 77 SVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-----NVSKFVFSSSATVYGDATR--------FPNMIPIPE 143 (347)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCCGGG--------STTCCSBCT
T ss_pred EEEEccccccccccccCcccccccchhhhHHHHHHHHhc-----ccceEEeecceeeecCccc--------CCCCCcccc
Confidence 01 2244567889999999999999988 6889999999999984321 012467888
Q ss_pred CCCCCCCCcchHHHHH-----HHHh----hCCCceEEEeccCceEeCCCCC
Q 030483 125 DSSRLPFPNFYYELED-----VSAS----YSPAITYSVHRSSVIIGASPRS 166 (176)
Q Consensus 125 ~~~~~~~~~~y~~~e~-----~~~~----~~~g~~~~ivRp~~v~G~~~~~ 166 (176)
+.+.. |...|+..| ++.+ ...+++++++||+++||+.+..
T Consensus 144 ~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~ 192 (347)
T d1z45a2 144 ECPLG--PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSG 192 (347)
T ss_dssp TSCCC--CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTS
T ss_pred ccCCC--CCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCC
Confidence 88765 333444433 3333 2568999999999999987643
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.85 E-value=1.2e-21 Score=157.58 Aligned_cols=142 Identities=11% Similarity=0.025 Sum_probs=91.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-CC------C--------------Ccc
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-FP------T--------------ALV 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~------~--------------~~v 58 (176)
|+|||||||||||++|+++|+ +.|++|+++.++.... . .. + ..+
T Consensus 3 mkILVTGgtGfIGs~lv~~L~-----~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v 77 (346)
T d1oc2a_ 3 KNIIVTGGAGFIGSNFVHYVY-----NNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAI 77 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHH-----HHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred CEEEEeCCCcHHHHHHHHHHH-----HCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhh
Confidence 689999999999999999999 6888765554432110 0 00 0 000
Q ss_pred ------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCC
Q 030483 59 ------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 126 (176)
Q Consensus 59 ------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~ 126 (176)
..++.+.+++|+.++.|+++++... + .+++++||..+||.........-.......+++|++
T Consensus 78 ~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-----~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~ 151 (346)
T d1oc2a_ 78 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-----D-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAET 151 (346)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-----T-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTS
T ss_pred hhhhhcccccchhhCcccceeeehHhHHhhhhhhccc-----c-ccccccccceEecccCccccccccccCcccccccCC
Confidence 1345678899999999999999987 3 467888888999742100000000000133556666
Q ss_pred CCCCCCcchHHHHHHH-----Hh--hCCCceEEEeccCceEeCCC
Q 030483 127 SRLPFPNFYYELEDVS-----AS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 127 ~~~~~~~~y~~~e~~~-----~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+.. |...|+..|+. .. +..+++++++||++||||..
T Consensus 152 ~~~--p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~ 194 (346)
T d1oc2a_ 152 NYN--PSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQ 194 (346)
T ss_dssp CCC--CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTC
T ss_pred CCC--CCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCC
Confidence 654 44455544433 33 45689999999999999975
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.84 E-value=1.1e-20 Score=150.63 Aligned_cols=137 Identities=18% Similarity=0.101 Sum_probs=92.9
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----CC------------------CC-----------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WF------------------PT----------- 55 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~------------------~~----------- 55 (176)
+|++||||||||||+||+++|+ .+||+|++++|..... .. .+
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~ 75 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLL-----GKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWI 75 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHH-----HCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHH
Confidence 5899999999999999999999 7999999999964310 00 00
Q ss_pred -----Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 56 -----ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 56 -----~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
+.| ..++...+..|+.++.+++++++..........++++.||+.+|+. .
T Consensus 76 ~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~-------------~ 142 (339)
T d1n7ha_ 76 DVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGS-------------T 142 (339)
T ss_dssp HHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTT-------------S
T ss_pred hhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceeccc-------------C
Confidence 001 1245667889999999999998764000012235566666555541 1
Q ss_pred CccccCCCCCCCCCcchHHHHH-----HHHh--hCCCceEEEeccCceEeCCCC
Q 030483 119 EVPFKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~~e~-----~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
..+++|++|.. |...|+..| ++.. +.++++++++||++||||..+
T Consensus 143 ~~~~~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~ 194 (339)
T d1n7ha_ 143 PPPQSETTPFH--PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRG 194 (339)
T ss_dssp CSSBCTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred CCCCCCCCCCC--CcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCC
Confidence 35688998865 444444443 3333 456899999999999999753
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.81 E-value=5.7e-20 Score=149.00 Aligned_cols=145 Identities=14% Similarity=0.063 Sum_probs=91.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEE-EEEecCCCCC-------CC---C------C----------------C
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKV-YGAARRPPPG-------WF---P------T----------------A 56 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V-~~l~R~~~~~-------~~---~------~----------------~ 56 (176)
|||||||||||||++|+++|+ ..|++| +++++..... .. . + +
T Consensus 1 MkILItG~tGfIGs~l~~~L~-----~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 75 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHII-----KNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPD 75 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-----HHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEECCCcHHHHHHHHHHH-----HCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCC
Confidence 589999999999999999999 688874 5555432110 00 0 0 0
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCC----CCCCccEEEEeccceeecccccCCCccCCCCCCCc
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNS----GRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 120 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~----~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~ 120 (176)
.| ..++...+++|+.+|.|++++|++... ...++++|+++||.++||..... ...+. ....
T Consensus 76 ~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~--~~~~~-~~~~ 152 (361)
T d1kewa_ 76 AVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHP--DEVEN-SVTL 152 (361)
T ss_dssp EEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCG--GGSCT-TSCC
T ss_pred EEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccC--Ccccc-ccCC
Confidence 11 124566789999999999999987500 00135689999999999853210 00000 0122
Q ss_pred cc-cCCCCCCCCCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCC
Q 030483 121 PF-KEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 121 p~-~E~~~~~~~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~ 164 (176)
|. .|+++.. |...|+..|+..| +.++++++++||++||||+.
T Consensus 153 ~~~~e~~~~~--p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~ 202 (361)
T d1kewa_ 153 PLFTETTAYA--PSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYH 202 (361)
T ss_dssp CCBCTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC
T ss_pred CCcccCCCCC--CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCC
Confidence 32 3444433 4444544444333 35689999999999999986
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.81 E-value=1.5e-19 Score=146.93 Aligned_cols=141 Identities=14% Similarity=0.138 Sum_probs=95.9
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-----C--------------------CC----------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-----G--------------------WF---------- 53 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-----~--------------------~~---------- 53 (176)
.||||||||+||||++|+++|++ ..||+|+++++-... . ..
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~----~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 77 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLR----DTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGD 77 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH----HCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHH----hCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECc
Confidence 46899999999999999999984 479999998741110 0 00
Q ss_pred ---------------CCCcc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccc
Q 030483 54 ---------------PTALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPI 106 (176)
Q Consensus 54 ---------------~~~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~ 106 (176)
+.+.| ..++...+.+|+.++.++++++++. +++++++.|+..+|+...
T Consensus 78 i~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-----~~~~~~~~~s~~~~~~~~ 152 (383)
T d1gy8a_ 78 VRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-----KCDKIIFSSSAAIFGNPT 152 (383)
T ss_dssp TTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGTBSCC
T ss_pred ccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-----CCcccccccccccccccc
Confidence 00011 1134456889999999999999998 678888888888886432
Q ss_pred cCCCccCCCCCCCccccCCCCCCCCCcchHHHHH-----HHHh--hCCCceEEEeccCceEeCCCC
Q 030483 107 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 107 ~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~-----~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
. .+ ......|+.|+++.. |...|+..| ++.+ ..++++++++||+++|||+..
T Consensus 153 ~----~~-~~~~~~~~~e~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~ 211 (383)
T d1gy8a_ 153 M----GS-VSTNAEPIDINAKKS--PESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHED 211 (383)
T ss_dssp C----------CCCCBCTTSCCB--CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTT
T ss_pred c----cc-ccccccccccccCCC--CCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCcc
Confidence 1 01 001245677777654 344444433 3333 357899999999999999873
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.79 E-value=4.6e-19 Score=133.19 Aligned_cols=119 Identities=18% Similarity=0.196 Sum_probs=85.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCCCCC------------------CCcc----------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGWFP------------------TALV---------- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~~~~------------------~~~v---------- 58 (176)
.|+|||||||||||++|+++|+ ++|+ +|++++|++...... .+.+
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~-----~~~~~~~v~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~~~~ 76 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRIL-----SEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKE 76 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHH-----HCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSCCSEEEECCCCCHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----hCCCeEEEEEEeCCchhhcccccccccchhhhhhccccchheeeeeeeeeccc
Confidence 5899999999999999999999 5776 688888876543110 0111
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHH
Q 030483 59 QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL 138 (176)
Q Consensus 59 ~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~ 138 (176)
.....++.++|+.++.+++++|++. ++++++++||..+|+. +..+|..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~a~~~-----~v~~~i~~Ss~~~~~~---------------------------~~~~y~~ 124 (212)
T d2a35a1 77 AGSEEAFRAVDFDLPLAVGKRALEM-----GARHYLVVSALGADAK---------------------------SSIFYNR 124 (212)
T ss_dssp HSSHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEECCTTCCTT---------------------------CSSHHHH
T ss_pred cccccccccchhhhhhhcccccccc-----cccccccccccccccc---------------------------cccchhH
Confidence 2234567889999999999999987 6899999998655421 1223443
Q ss_pred HHHHHh---hCCCc-eEEEeccCceEeCCC
Q 030483 139 EDVSAS---YSPAI-TYSVHRSSVIIGASP 164 (176)
Q Consensus 139 e~~~~~---~~~g~-~~~ivRp~~v~G~~~ 164 (176)
.|...| .+.++ +|+|+||+.|||+..
T Consensus 125 ~K~~~E~~l~~~~~~~~~I~Rp~~v~G~~~ 154 (212)
T d2a35a1 125 VKGELEQALQEQGWPQLTIARPSLLFGPRE 154 (212)
T ss_dssp HHHHHHHHHTTSCCSEEEEEECCSEESTTS
T ss_pred HHHHHhhhccccccccceeeCCcceeCCcc
Confidence 343333 34565 599999999999975
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=3e-19 Score=136.47 Aligned_cols=120 Identities=18% Similarity=0.146 Sum_probs=85.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCCCCC----------C--------------Ccc--
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGWFP----------T--------------ALV-- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~~~~----------~--------------~~v-- 58 (176)
|++++|||||||||||++|+++|+ .+|+ +|++++|++...... + +.+
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll-----~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~ 86 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEIL-----EQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFC 86 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHH-----HHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----hCCCCCEEEEEecChhhhcccccceeeeeeecccccccccccccccccccc
Confidence 467899999999999999999999 5675 899999987543210 0 000
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCC
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF 131 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~ 131 (176)
..+..++.++|+.++.+++++|.+. ++++|+++|+..+|.. .
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-----~v~~fi~~Ss~~~~~~--------------------------~ 135 (232)
T d2bkaa1 87 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-----GCKHFNLLSSKGADKS--------------------------S 135 (232)
T ss_dssp CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEECCTTCCTT--------------------------C
T ss_pred cccccccccchhhhhhhcccccceeeeccccc-----CccccccCCccccccC--------------------------c
Confidence 1234556789999999999999987 6899999998654421 0
Q ss_pred Ccch----HHHHHHHHhhCCCc-eEEEeccCceEeCCC
Q 030483 132 PNFY----YELEDVSASYSPAI-TYSVHRSSVIIGASP 164 (176)
Q Consensus 132 ~~~y----~~~e~~~~~~~~g~-~~~ivRp~~v~G~~~ 164 (176)
...| +..|+.+. +.++ +++|+||+.+||++.
T Consensus 136 ~~~Y~~~K~~~E~~l~--~~~~~~~~IlRP~~i~G~~~ 171 (232)
T d2bkaa1 136 NFLYLQVKGEVEAKVE--ELKFDRYSVFRPGVLLCDRQ 171 (232)
T ss_dssp SSHHHHHHHHHHHHHH--TTCCSEEEEEECCEEECTTG
T ss_pred cchhHHHHHHhhhccc--cccccceEEecCceeecCCC
Confidence 1222 22344443 4565 489999999999875
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.79 E-value=2.4e-19 Score=139.00 Aligned_cols=131 Identities=18% Similarity=0.154 Sum_probs=94.1
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCC-----------CCcc------------cCcHHHH
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP-----------TALV------------QESEEVN 65 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~-----------~~~v------------~~~~~~~ 65 (176)
+|||||||||||||++|+++|. .+||+|++++|+..+.... .+.| ...+...
T Consensus 1 ~MKIlItGasGfiG~~l~~~L~-----~~g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~ 75 (281)
T d1vl0a_ 1 HMKILITGANGQLGREIQKQLK-----GKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLA 75 (281)
T ss_dssp CEEEEEESTTSHHHHHHHHHHT-----TSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----hCCCEEEEeechhccCCCHHHHHHHHHHcCCCEEEeeccccccccccccchhh
Confidence 3689999999999999999999 7999999999987653210 0111 2234556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh-
Q 030483 66 IFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS- 144 (176)
Q Consensus 66 ~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~- 144 (176)
...|+..+.++++.+... ...+++.|+..+|+.+ ...|.+|+++.. +...|...+...+
T Consensus 76 ~~~n~~~~~~~~~~~~~~------~~~~~~~ss~~v~~~~------------~~~~~~e~~~~~--~~~~~~~~k~~~e~ 135 (281)
T d1vl0a_ 76 YKINAIGPKNLAAAAYSV------GAEIVQISTDYVFDGE------------AKEPITEFDEVN--PQSAYGKTKLEGEN 135 (281)
T ss_dssp HHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCSC------------CSSCBCTTSCCC--CCSHHHHHHHHHHH
T ss_pred cccccccccccccccccc------cccccccccceeeecc------------cccccccccccc--chhhhhhhhhHHHH
Confidence 778888888888888776 3466777888888643 246788888754 3334444333333
Q ss_pred --hCCCceEEEeccCceEeCCC
Q 030483 145 --YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 145 --~~~g~~~~ivRp~~v~G~~~ 164 (176)
+..+.+++|+||++||||+.
T Consensus 136 ~~~~~~~~~~i~R~~~vyG~~~ 157 (281)
T d1vl0a_ 136 FVKALNPKYYIVRTAWLYGDGN 157 (281)
T ss_dssp HHHHHCSSEEEEEECSEESSSS
T ss_pred HHHHhCCCccccceeEEeCCCc
Confidence 35678999999999999985
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.78 E-value=2.3e-18 Score=138.12 Aligned_cols=138 Identities=18% Similarity=0.167 Sum_probs=91.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------------C----------C---------CC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------------W----------F---------PT 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------~----------~---------~~ 55 (176)
.+|+|||||||||||++|+++|+ .+||+|++++|+.... . . ..
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll-----~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 84 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLL-----EHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA 84 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC
T ss_pred CcCEEEEECCCCHHHHHHHHHHH-----HCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccc
Confidence 36899999999999999999999 6899999999863210 0 0 00
Q ss_pred Ccc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC-
Q 030483 56 ALV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED- 125 (176)
Q Consensus 56 ~~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~- 125 (176)
+.+ ..++...+..|+.+|.|++++|.+. .++++|+++||..+++.+.. .. .....+|+
T Consensus 85 ~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~~~i~~SS~~~~~~~~~-----~~---~~~~~~e~~ 152 (342)
T d1y1pa1 85 AGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAAT----PSVKRFVLTSSTVSALIPKP-----NV---EGIYLDEKS 152 (342)
T ss_dssp SEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTC----TTCCEEEEECCGGGTCCCCT-----TC---CCCEECTTC
T ss_pred hhhhhhcccccccccccccccchhhhHHHHHHhhhcc----cccccccccccceeeccCCC-----CC---CCccccccc
Confidence 001 3345677889999999999999986 36899999998765542210 00 11222222
Q ss_pred ---------------CCCCCCCcchHHHHHHHHh---------hCCCceEEEeccCceEeCCC
Q 030483 126 ---------------SSRLPFPNFYYELEDVSAS---------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 126 ---------------~~~~~~~~~y~~~e~~~~~---------~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+.. |...|+..|...| ...+++++++||+++|||..
T Consensus 153 ~~~~~~~~~~~~~e~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~ 213 (342)
T d1y1pa1 153 WNLESIDKAKTLPESDPQK--SLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIF 213 (342)
T ss_dssp CCHHHHHHHHHSCTTSTTH--HHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCS
T ss_pred cccccccccccccccCCCC--CcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCC
Confidence 2221 2223444333322 35578999999999999965
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.77 E-value=1.2e-18 Score=139.15 Aligned_cols=134 Identities=19% Similarity=0.216 Sum_probs=91.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCCCCC-----CC---------CC------------Ccc----
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPG-----WF---------PT------------ALV---- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~-----~~---------~~------------~~v---- 58 (176)
|||||||||||||++|+++|+ +.| ++|+++++..... .. .+ +.|
T Consensus 1 MKILITG~tGfiG~~l~~~Ll-----~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a 75 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLL-----REDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV 75 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHH-----HSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred CEEEEECCCcHHHHHHHHHHH-----HCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCcccccc
Confidence 489999999999999999999 566 6899998754311 00 00 001
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCC--
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR-- 128 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~-- 128 (176)
..++.+.+.+|+.++.++++++.+. +++ +++.||+.+|+... ....+|+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-----~~~-~~~~ss~~~~~~~~------------~~~~~~~~~~~~ 137 (342)
T d2blla1 76 AIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-----RKR-IIFPSTSEVYGMCS------------DKYFDEDHSNLI 137 (342)
T ss_dssp CCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-----TCE-EEEECCGGGGBTCC------------CSSBCTTTCCCB
T ss_pred ccccccccccCCccccccccccccccccccccc-----ccc-cccccccccccccc------------cccccccccccc
Confidence 2234567899999999999999987 444 56778889998542 1122222111
Q ss_pred ---CCCCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCCCC
Q 030483 129 ---LPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPRS 166 (176)
Q Consensus 129 ---~~~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~~ 166 (176)
...|...|+.+|++.| +..+++++++||+.+|||+..+
T Consensus 138 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~ 185 (342)
T d2blla1 138 VGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDN 185 (342)
T ss_dssp CCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCC
T ss_pred ccccCCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccc
Confidence 1234556665555544 3568999999999999998754
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.77 E-value=7e-19 Score=143.25 Aligned_cols=141 Identities=18% Similarity=0.103 Sum_probs=89.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC------------CC-CCC--------------CC------C
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR------------PP-PGW--------------FP------T 55 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~------------~~-~~~--------------~~------~ 55 (176)
+|||||||||||||++|+++|+ +.||+|++++.- .. +.. .. +
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll-----~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D 75 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLS-----KKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD 75 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----HCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEcc
Confidence 4799999999999999999999 799999998620 00 000 00 0
Q ss_pred ----------------Ccc------------cCc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecc
Q 030483 56 ----------------ALV------------QES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMG 104 (176)
Q Consensus 56 ----------------~~v------------~~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~ 104 (176)
+.| ..+ +...+.+|+.+|.|++++|++. + ..+++++.||..+|+.
T Consensus 76 l~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~-~~~~~i~~ss~~~~~~ 151 (393)
T d1i24a_ 76 ICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---G-EECHLVKLGTMGEYGT 151 (393)
T ss_dssp TTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---C-TTCEEEEECCGGGGCC
T ss_pred CCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHh---c-cccceeeccccccccc
Confidence 111 112 2346789999999999999997 3 2356778888888864
Q ss_pred cccCCCccCCCCCCCccccCC-----CCCCCCCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCC
Q 030483 105 PIFDPSLAGQLMPYEVPFKED-----SSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 105 ~~~d~~~~g~~~~~~~p~~E~-----~~~~~~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~ 164 (176)
+.. .... ...+..|+ .+....|...|+.+|++.| +.++++++++||++||||..
T Consensus 152 ~~~---~~~~---~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~ 217 (393)
T d1i24a_ 152 PNI---DIEE---GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKT 217 (393)
T ss_dssp CSS---CBCS---SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCC
T ss_pred ccc---cccc---ccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCc
Confidence 320 0000 00111111 1111234555666555544 46789999999999999975
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.77 E-value=1.7e-18 Score=138.53 Aligned_cols=135 Identities=18% Similarity=0.114 Sum_probs=91.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------CCC----------------------Cc
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPT----------------------AL 57 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~----------------------~~ 57 (176)
+|||||||||||||++|+++|+ +.||+|++++|...... ... ..
T Consensus 8 ~KkILVTG~tGfIGs~lv~~Ll-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~ 82 (356)
T d1rkxa_ 8 GKRVFVTGHTGFKGGWLSLWLQ-----TMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEI 82 (356)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhh
Confidence 5899999999999999999999 79999999999765321 000 00
Q ss_pred c------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC
Q 030483 58 V------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 58 v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
+ ...+...+.+|+.++.++++++.+. . ....+++.|+...|.... ...+.+|+
T Consensus 83 v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~-~~~~~~~~s~~~~~~~~~-----------~~~~~~~~ 147 (356)
T d1rkxa_ 83 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHV---G-GVKAVVNITSDKCYDNKE-----------WIWGYREN 147 (356)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---C-CCCEEEEECCGGGBCCCC-----------SSSCBCTT
T ss_pred hhhhhccccccccccCCccccccccccchhhhhhhhcc---c-cccccccccccccccccc-----------cccccccc
Confidence 0 2345667899999999999999987 3 345556655554443221 13456666
Q ss_pred CCCCCCCcch----HHHHHHHHh-----------hCCCceEEEeccCceEeCCC
Q 030483 126 SSRLPFPNFY----YELEDVSAS-----------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 126 ~~~~~~~~~y----~~~e~~~~~-----------~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+..|. ..| ...|..+.. ...++.++++||+++|||+.
T Consensus 148 ~~~~p~-~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~ 200 (356)
T d1rkxa_ 148 EAMGGY-DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD 200 (356)
T ss_dssp SCBCCS-SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC
T ss_pred cccCCC-CccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCc
Confidence 654422 222 222322221 13578999999999999986
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=1.2e-18 Score=130.61 Aligned_cols=126 Identities=14% Similarity=0.098 Sum_probs=85.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC----CCCcc------------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF----PTALV------------------------ 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~----~~~~v------------------------ 58 (176)
|.++||+|||||||||++|+++|+ ++||+|++++|++.+... ..+.+
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll-----~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~ 75 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAV-----QAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL 75 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEe
Confidence 556889999999999999999999 799999999998654211 11111
Q ss_pred -cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHH
Q 030483 59 -QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE 137 (176)
Q Consensus 59 -~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~ 137 (176)
...+....+++..+++|++++++++ +++||+++||..+|+.+ +..+. ....++.
T Consensus 76 g~~~~~~~~~~~~~~~~~l~~aa~~~-----~v~r~i~~ss~~~~~~~------------------~~~~~--~~~~~~~ 130 (205)
T d1hdoa_ 76 GTRNDLSPTTVMSEGARNIVAAMKAH-----GVDKVVACTSAFLLWDP------------------TKVPP--RLQAVTD 130 (205)
T ss_dssp CCTTCCSCCCHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCT------------------TCSCG--GGHHHHH
T ss_pred ccCCchhhhhhhHHHHHHHHHHHHhc-----CCCeEEEEeeeeccCCC------------------ccccc--cccccch
Confidence 1111122346778899999999998 68999999987665421 11110 1112232
Q ss_pred ----HHHHHHhhCCCceEEEeccCceEeCCC
Q 030483 138 ----LEDVSASYSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 138 ----~e~~~~~~~~g~~~~ivRp~~v~G~~~ 164 (176)
.|++++ ..+++|+|+||+.+++...
T Consensus 131 ~~~~~e~~l~--~~~~~~tiirp~~~~~~~~ 159 (205)
T d1hdoa_ 131 DHIRMHKVLR--ESGLKYVAVMPPHIGDQPL 159 (205)
T ss_dssp HHHHHHHHHH--HTCSEEEEECCSEEECCCC
T ss_pred HHHHHHHHHH--hcCCceEEEecceecCCCC
Confidence 344443 5789999999999986433
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=2.3e-16 Score=122.67 Aligned_cols=128 Identities=11% Similarity=0.082 Sum_probs=83.7
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCCC-------CCCC---------------------Ccc----
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPG-------WFPT---------------------ALV---- 58 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~-------~~~~---------------------~~v---- 58 (176)
|||||||||||++|+++|+ ++|+ +|+++++-.... ..-. ..+
T Consensus 2 ILITGgsGfIGs~lv~~L~-----~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a 76 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALN-----DKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEG 76 (307)
T ss_dssp EEEETTTSHHHHHHHHHHH-----TTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECC
T ss_pred EEEecCccHHHHHHHHHHH-----hCCCCeEEEEECCCCcchhhcccccchhhhccchHHHHHHhhhhcccchhhhhhhc
Confidence 8999999999999999999 6886 799986432210 0000 000
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCC
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 132 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~ 132 (176)
..+.......|+.++.+++++++.. .++ +++.||+.+|+++. ..+..|+.+.. |
T Consensus 77 a~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~i~-~v~~ss~~~~~~~~------------~~~~~~~~~~~--~ 136 (307)
T d1eq2a_ 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLER-----EIP-FLYASSAATYGGRT------------SDFIESREYEK--P 136 (307)
T ss_dssp SCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-----TCC-EEEEEEGGGGTTCC------------SCBCSSGGGCC--C
T ss_pred ccccccccccccccccccccccccccccccc-----ccc-cccccccccccccc------------ccccccccccc--c
Confidence 2234556788899999999999987 455 45556666665331 22333333322 3
Q ss_pred cchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 133 NFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 133 ~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
...|.. |+++.+ ...+++++++||+++|||+.
T Consensus 137 ~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~ 175 (307)
T d1eq2a_ 137 LNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPRE 175 (307)
T ss_dssp SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSC
T ss_pred ccccccccchhhhhccccccccccccccccceeEeeccc
Confidence 333443 444433 46789999999999999976
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.68 E-value=1.2e-16 Score=126.22 Aligned_cols=142 Identities=14% Similarity=0.002 Sum_probs=83.9
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CCCC----------------------Ccc
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFPT----------------------ALV 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~----------------------~~v 58 (176)
||||||||||||+||+++|+ ++||+|++++|-.... .... +.|
T Consensus 2 KILVTGatGfIGs~lv~~Ll-----~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~V 76 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFAL-----SQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSC 76 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred EEEEECCCcHHHHHHHHHHH-----HCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceE
Confidence 79999999999999999999 6899999987532110 0000 011
Q ss_pred ------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccE-EEEeccceeecccccCCCccCC----CCCCCcc
Q 030483 59 ------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRH-VALLTGTKHYMGPIFDPSLAGQ----LMPYEVP 121 (176)
Q Consensus 59 ------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~-vv~~Ss~~~yg~~~~d~~~~g~----~~~~~~p 121 (176)
..++...+++|+.||.||++++.+. ++++ |++.|+..+|+.+......... .......
T Consensus 77 ih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-----~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (338)
T d1orra_ 77 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-----NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNG 151 (338)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-----CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTC
T ss_pred EeecccccccccccChHHHHHHHHHHHHHHHHhhhcc-----cccccccccccccccccccccccccccccccccccccC
Confidence 2245678899999999999999998 3444 4454444444432100000000 0000111
Q ss_pred ccCCCCCCCCCcchHHHHHHHH-----h--hCCCceEEEeccCceEeCCC
Q 030483 122 FKEDSSRLPFPNFYYELEDVSA-----S--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 122 ~~E~~~~~~~~~~y~~~e~~~~-----~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
..+.++. .|...|+..+... . +.++...+++|++++||+..
T Consensus 152 ~~~~~~~--~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (338)
T d1orra_ 152 YDESTQL--DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQ 199 (338)
T ss_dssp BCTTSCC--CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTC
T ss_pred cccCCcc--ccccccccccchhhhhhhhhhhccCcccccccccceeeccc
Confidence 1222222 2333344333332 2 45689999999999998765
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.61 E-value=5.6e-15 Score=114.39 Aligned_cols=128 Identities=14% Similarity=0.162 Sum_probs=81.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC---C------------CCcc------------cCcH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF---P------------TALV------------QESE 62 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~---~------------~~~v------------~~~~ 62 (176)
|||||||||||||++|+++|. +.|+.| .++++...... . .+.| ..++
T Consensus 1 MKILItG~tGfiG~~l~~~L~-----~~g~~v-~~~~~~~~~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~ 74 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLA-----PVGNLI-ALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEP 74 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-----TTSEEE-EECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHH-----hCCCEE-EEECCCccccCcCCCHHHHHHHHHHcCCCEEEEecccccccccccCc
Confidence 579999999999999999999 687655 45554332110 0 0111 3456
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHH
Q 030483 63 EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVS 142 (176)
Q Consensus 63 ~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~ 142 (176)
...+.+|+.++.++++++.+. + .++++.||+.+|+.. ...|++|+++.. |...|...+..
T Consensus 75 ~~~~~~n~~~~~~l~~~~~~~-----~-~~~~~~ss~~~~~~~------------~~~~~~E~~~~~--p~~~y~~~k~~ 134 (298)
T d1n2sa_ 75 ELAQLLNATSVEAIAKAANET-----G-AWVVHYSTDYVFPGT------------GDIPWQETDATS--PLNVYGKTKLA 134 (298)
T ss_dssp HHHHHHHTHHHHHHHHHHTTT-----T-CEEEEEEEGGGSCCC------------TTCCBCTTSCCC--CSSHHHHHHHH
T ss_pred cccccccccccccchhhhhcc-----c-cccccccccccccCC------------CCCCCccccccC--CCchHhhhhhh
Confidence 667899999999999999876 3 356777777777532 256889998865 33333333333
Q ss_pred Hh---hCCCceEEEeccCceEeCC
Q 030483 143 AS---YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 143 ~~---~~~g~~~~ivRp~~v~G~~ 163 (176)
.| ........++|++..|+..
T Consensus 135 ~e~~~~~~~~~~~~~~~~~~~~~~ 158 (298)
T d1n2sa_ 135 GEKALQDNCPKHLIFRTSWVYAGK 158 (298)
T ss_dssp HHHHHHHHCSSEEEEEECSEECSS
T ss_pred hhhhHHhhhcccccccccceeecc
Confidence 22 1223344566655555443
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.58 E-value=1.9e-16 Score=122.54 Aligned_cols=135 Identities=15% Similarity=0.090 Sum_probs=81.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-------------CCCccc---CcHH--------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-------------PTALVQ---ESEE-------- 63 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-------------~~~~v~---~~~~-------- 63 (176)
++|||||||||||||++|+++|+ +.||+|++++|++..... ....+. .+..
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~-----~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 76 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASL-----DLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKN 76 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHH-----HTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhh
Confidence 47899999999999999999999 689999999998654311 001110 0000
Q ss_pred ------HHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHH
Q 030483 64 ------VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE 137 (176)
Q Consensus 64 ------~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~ 137 (176)
.....+..++.++++++... .++++++.|+...+ .++..... ....++.
T Consensus 77 ~~~vi~~~~~~~~~~~~~~~~a~~~~-----~~~~~~~~s~~~~~-------------------~~~~~~~~-~~~~~~~ 131 (307)
T d1qyca_ 77 VDVVISTVGSLQIESQVNIIKAIKEV-----GTVKRFFPSEFGND-------------------VDNVHAVE-PAKSVFE 131 (307)
T ss_dssp CSEEEECCCGGGSGGGHHHHHHHHHH-----CCCSEEECSCCSSC-------------------TTSCCCCT-THHHHHH
T ss_pred ceeeeecccccccchhhHHHHHHHHh-----ccccceeeeccccc-------------------cccccccc-ccccccc
Confidence 01123445567888888887 45667776653211 11222111 1122222
Q ss_pred HHHHHHh--hCCCceEEEeccCceEeCCCCCCCCCCC
Q 030483 138 LEDVSAS--YSPAITYSVHRSSVIIGASPRSLYXXXX 172 (176)
Q Consensus 138 ~e~~~~~--~~~g~~~~ivRp~~v~G~~~~~~~~~~~ 172 (176)
....... ...+++++++||+++||+....+.+.+.
T Consensus 132 ~~~~~~~~~~~~~~~~~i~r~~~v~g~~~~~~~~~~~ 168 (307)
T d1qyca_ 132 VKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGL 168 (307)
T ss_dssp HHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTC
T ss_pred ccccccchhhccCCCceecccceecCCCccchhhhhh
Confidence 2211111 3568999999999999998755555443
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.55 E-value=1.8e-15 Score=117.76 Aligned_cols=129 Identities=14% Similarity=0.025 Sum_probs=79.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC------------CCCCcc---cCc------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------------FPTALV---QES------------ 61 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------------~~~~~v---~~~------------ 61 (176)
++||||||||||||++|+++|+ +.||+|++++|+..... .....+ ..+
T Consensus 3 k~KILVtGatG~iG~~l~~~L~-----~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~ 77 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASI-----SLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVD 77 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-----HTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----hCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcc
Confidence 5689999999999999999999 78999999999764321 001111 000
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcch
Q 030483 62 ------EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFY 135 (176)
Q Consensus 62 ------~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y 135 (176)
.......|...+.++++++.+. ...++++.||..++. -.+..+.. +...+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~-----~~~~~v~~Ss~g~~~------------------~~~~~~~~-~~~~~ 133 (312)
T d1qyda_ 78 VVISALAGGVLSHHILEQLKLVEAIKEA-----GNIKRFLPSEFGMDP------------------DIMEHALQ-PGSIT 133 (312)
T ss_dssp EEEECCCCSSSSTTTTTHHHHHHHHHHS-----CCCSEEECSCCSSCT------------------TSCCCCCS-STTHH
T ss_pred hhhhhhhhcccccchhhhhHHHHHHHHh-----cCCcEEEEeeccccC------------------CCcccccc-hhhhh
Confidence 0111234666778889998887 334455566543321 11222222 12334
Q ss_pred HHHHHHHHh--hCCCceEEEeccCceEeCCCCC
Q 030483 136 YELEDVSAS--YSPAITYSVHRSSVIIGASPRS 166 (176)
Q Consensus 136 ~~~e~~~~~--~~~g~~~~ivRp~~v~G~~~~~ 166 (176)
+..+....+ ...+++++++||+.+||+....
T Consensus 134 ~~~~~~~~~~~~~~~~~~~i~r~~~~~g~~~~~ 166 (312)
T d1qyda_ 134 FIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGS 166 (312)
T ss_dssp HHHHHHHHHHHHHTTCCBCEEECCEEHHHHTTT
T ss_pred hHHHHHHHHhhcccccceEEeccceeecCCccc
Confidence 443333333 4578999999999999986643
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.53 E-value=4.2e-15 Score=111.13 Aligned_cols=127 Identities=13% Similarity=0.094 Sum_probs=78.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE--EEEEecCCCCC---CCC--------------------CCcc-----
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWK--VYGAARRPPPG---WFP--------------------TALV----- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~--V~~l~R~~~~~---~~~--------------------~~~v----- 58 (176)
.++|||||||||||++|+++|+ ++||+ |++++|++... ... .+.+
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll-----~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~ 77 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLK-----EGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTS 77 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHH-----HTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCccHHHHHHHHHHH-----HCCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccccceeeEEEEe
Confidence 3699999999999999999999 67765 77778864321 000 0000
Q ss_pred --------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 59 --------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 59 --------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
.........+|+.++.+++..+... ..++..+.|+...+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~~~-------------- 138 (252)
T d2q46a1 78 AVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-----GVKHIVVVGSMGGTNP-------------- 138 (252)
T ss_dssp CCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-----TCSEEEEEEETTTTCT--------------
T ss_pred eccccccccchhhhhhcccccccchhhhccccccceeeccccccc-----cccccccccccccCCC--------------
Confidence 1123445678999999999998877 4566666665332210
Q ss_pred CccccCCCCCCCCCcchHHHHHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 119 EVPFKEDSSRLPFPNFYYELEDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~~e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
..|.... ....|...+..... ...+++++++||+++||+..
T Consensus 139 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~ 181 (252)
T d2q46a1 139 DHPLNKL-----GNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEG 181 (252)
T ss_dssp TCGGGGG-----GGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCT
T ss_pred Ccccccc-----cccchhhhhhhhhhhhhcccccceeecceEEECCCc
Confidence 0111000 11222222222222 46789999999999999985
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.41 E-value=3.9e-13 Score=107.16 Aligned_cols=126 Identities=10% Similarity=0.004 Sum_probs=77.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CCCCCcc----cCcH--------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WFPTALV----QESE-------------- 62 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v----~~~~-------------- 62 (176)
.+|+|||||||||||++|+++|+ +.||+|++++|++... ......+ .+..
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll-----~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~ 76 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAA-----AVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAF 76 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHH-----HTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHH-----hCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEE
Confidence 46899999999999999999999 7999999999976531 0111111 0000
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHH
Q 030483 63 ---EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELE 139 (176)
Q Consensus 63 ---~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e 139 (176)
......|+..+.++++++.+. +++++++.||...+.. .+ . .+..+........+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~aa~~a-----gv~~~v~~Ss~~~~~~---------------~~--~-~~~~~~~~~k~~~~ 133 (350)
T d1xgka_ 77 INTTSQAGDEIAIGKDLADAAKRA-----GTIQHYIYSSMPDHSL---------------YG--P-WPAVPMWAPKFTVE 133 (350)
T ss_dssp ECCCSTTSCHHHHHHHHHHHHHHH-----SCCSEEEEEECCCGGG---------------TS--S-CCCCTTTHHHHHHH
T ss_pred eecccccchhhhhhhHHHHHHHHh-----CCCceEEEeecccccc---------------CC--c-ccchhhhhhHHHHH
Confidence 011234667788999999987 5656666666433210 00 0 01011111122233
Q ss_pred HHHHhhCCCceEEEeccCceEeCC
Q 030483 140 DVSASYSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 140 ~~~~~~~~g~~~~ivRp~~v~G~~ 163 (176)
.++ ...+.+++++||+.+++.-
T Consensus 134 ~~~--~~~~~~~~~vr~~~~~~~~ 155 (350)
T d1xgka_ 134 NYV--RQLGLPSTFVYAGIYNNNF 155 (350)
T ss_dssp HHH--HTSSSCEEEEEECEEGGGC
T ss_pred HHH--HhhccCceeeeeceeeccc
Confidence 333 3567999999999887753
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.94 E-value=2.1e-09 Score=81.52 Aligned_cols=89 Identities=19% Similarity=0.093 Sum_probs=62.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--------CC------------------Ccc--
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------PT------------------ALV-- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------~~------------------~~v-- 58 (176)
-++|++|||||++-||++++++|+ +.|++|++.+|+...... .+ +.+
T Consensus 5 l~gK~~lITGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVn 79 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLA-----ADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVS 79 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCcchhcCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEe
Confidence 468999999999999999999999 799999999998654211 00 000
Q ss_pred --------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 59 --------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 59 --------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
.+++++.+++|+.++..+.+++...+. ..+-.+||++||...
T Consensus 80 nAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~-~~~~g~Iv~isS~~~ 135 (237)
T d1uzma1 80 NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQ-RNKFGRMIFIGSVSG 135 (237)
T ss_dssp ECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTTCEEEEEECCCCC
T ss_pred eecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccc-ccCCCceEEEcchhh
Confidence 224567889999887666554443311 113468999988644
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.92 E-value=6.7e-09 Score=78.43 Aligned_cols=85 Identities=9% Similarity=0.005 Sum_probs=61.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-------CC----------------------Ccc-
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-------PT----------------------ALV- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-------~~----------------------~~v- 58 (176)
+|+||||||+|-||.+++++|+ ++||+|..++|....... .. +.+
T Consensus 2 gK~vlITGas~GIG~a~a~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lI 76 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFR-----ARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL 76 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----TTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCccccccccceeecccCcHHHHHHHHHHHHHHhCCCCceEEE
Confidence 6899999999999999999999 799999999886543210 00 000
Q ss_pred ------------c----CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 59 ------------Q----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 59 ------------~----~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
. +.++..+++|+.++.++..++...+. +-.+|+++||...
T Consensus 77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~---~~G~Iv~isS~~~ 132 (236)
T d1dhra_ 77 CVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLK---EGGLLTLAGAKAA 132 (236)
T ss_dssp ECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEECCGGG
T ss_pred ECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcc---cccceeEEccHHH
Confidence 1 12345689999998888888777532 2367888887543
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.80 E-value=1.9e-08 Score=75.74 Aligned_cols=84 Identities=11% Similarity=0.022 Sum_probs=60.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC------CC-----------------------Ccc-
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF------PT-----------------------ALV- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~------~~-----------------------~~v- 58 (176)
..|||||||+|-||.+++++|+ ++||+|+.++|+...... .+ +.+
T Consensus 2 ~gkVlITGas~GIG~aia~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~li 76 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFK-----KNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF 76 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHH-----HTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCchhcccccceeccccCchhHHHHHHHHHHHHhcCCCeeEEE
Confidence 3579999999999999999999 799999999998654210 00 000
Q ss_pred ------------c----CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 59 ------------Q----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 59 ------------~----~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
. +.++..+++|+.++.++.+++...+. +=.+++++||..
T Consensus 77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~---~~g~Iv~isS~~ 131 (235)
T d1ooea_ 77 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLK---PGGLLQLTGAAA 131 (235)
T ss_dssp ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEECCGG
T ss_pred ECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccc---cceEEEEeccHH
Confidence 1 12344688999998888888776532 225788888754
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.79 E-value=3.7e-09 Score=80.61 Aligned_cols=123 Identities=16% Similarity=0.081 Sum_probs=77.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCCCCC-----------CC-------C------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWF-----------PT-------A------------ 56 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~-----------~~-------~------------ 56 (176)
...++|||||+|.||.+++++|. ++|+ .|+.++|+..+... .. +
T Consensus 8 p~gt~lVTGgs~GIG~a~a~~la-----~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~ 82 (259)
T d2fr1a1 8 PTGTVLVTGGTGGVGGQIARWLA-----RRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLG 82 (259)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHH-----HHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CcCEEEEECCCcHHHHHHHHHHH-----HCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhc
Confidence 34699999999999999999999 6888 47778886322100 00 0
Q ss_pred ------cc-------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCc
Q 030483 57 ------LV-------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 57 ------~v-------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
.+ .++....+++|+.++.++.+++... +..+|+++||....-+.
T Consensus 83 ~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-----~~~~iv~~SS~a~~~g~------ 151 (259)
T d2fr1a1 83 GIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-----DLTAFVLFSSFASAFGA------ 151 (259)
T ss_dssp TSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-----CCSEEEEEEEHHHHTCC------
T ss_pred cccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-----CCceEeeecchhhccCC------
Confidence 00 1123446789999999998887665 45688888886543110
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHH----HHHHHh-hCCCceEEEeccCceEeCCC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSAS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~----e~~~~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
| ....|... +.+..+ +..|++++.+.|+.+.+++.
T Consensus 152 ---------~---------~~~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~ 191 (259)
T d2fr1a1 152 ---------P---------GLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGM 191 (259)
T ss_dssp ---------T---------TCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC----
T ss_pred ---------c---------ccHHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCcc
Confidence 0 00123322 233233 46789999999998877654
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.75 E-value=8e-09 Score=78.46 Aligned_cols=87 Identities=15% Similarity=-0.020 Sum_probs=60.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CC--------CC-----------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WF--------PT----------------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~--------~~----------------- 55 (176)
..+|++|||||++-||.+++++|+ +.|++|+..+|+.... .. .+
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 77 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFA-----KEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGR 77 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 457999999999999999999999 7999999999975321 00 00
Q ss_pred -Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 56 -ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 56 -~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
+.+ .++++..+++|+.++.++.+++...+. ..+-..++.+||.
T Consensus 78 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~-~~~~~~i~~~ss~ 137 (242)
T d1ulsa_ 78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMR-EKNPGSIVLTASR 137 (242)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCCEEEEEECCG
T ss_pred ceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccc-ccccceeeeeccc
Confidence 000 224567889999998888877766532 1133556666653
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=98.75 E-value=1.1e-08 Score=77.94 Aligned_cols=126 Identities=17% Similarity=0.076 Sum_probs=79.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CC-C---------C--------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WF-P---------T-------------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~---------~-------------- 55 (176)
+.+|++|||||++-||.+++++|+ +.|++|+..+|++.+. .. . +
T Consensus 3 L~gKvalVTGas~GIG~aia~~la-----~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~ 77 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFA-----VEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST 77 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 467999999999999999999999 7999999999976431 00 0 0
Q ss_pred ----Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 56 ----ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 56 ----~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
+.+ .++++..+++|+.++.++.+++...+. ..+-.+|+++||.....
T Consensus 78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~-~~~~G~Iv~isS~~~~~------------ 144 (247)
T d2ew8a1 78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMK-RNGWGRIINLTSTTYWL------------ 144 (247)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGGS------------
T ss_pred cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHH-hcCCCCccccccchhcc------------
Confidence 000 234567889999987777766654321 01236788888754321
Q ss_pred CCCCccccCCCCCCCCCcchHHHH-------HHH-Hh-hCCCceEEEeccCceEeC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYELE-------DVS-AS-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~e-------~~~-~~-~~~g~~~~ivRp~~v~G~ 162 (176)
+ .+ ....|...+ +.+ .| ..+|+++-.+.|+.|--+
T Consensus 145 -----~----~~---~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~ 188 (247)
T d2ew8a1 145 -----K----IE---AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTA 188 (247)
T ss_dssp -----C----CS---SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---
T ss_pred -----c----Cc---ccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 1 01 112333322 111 22 467899999999988654
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=98.72 E-value=1.5e-08 Score=77.20 Aligned_cols=88 Identities=11% Similarity=-0.027 Sum_probs=62.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC----------C---CC------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----------F---PT------------------A 56 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----------~---~~------------------~ 56 (176)
.+|++|||||++-||.+++++|+ ++|++|...+|+..... . .+ +
T Consensus 4 ~GK~alITGas~GIG~aia~~la-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 78 (248)
T d2d1ya1 4 AGKGVLVTGGARGIGRAIAQAFA-----REGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVD 78 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCC
Confidence 57899999999999999999999 79999999999754210 0 00 0
Q ss_pred cc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 57 LV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 57 ~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
.+ .++++..+++|+.++.++.+++...+. ..+-.+||++||...
T Consensus 79 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~-~~~~G~Ii~isS~~~ 138 (248)
T d2d1ya1 79 VLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMR-KVGGGAIVNVASVQG 138 (248)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-TTTCEEEEEECCGGG
T ss_pred eEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccc-ccccccccccccccc
Confidence 00 224567889999998887777765431 112368898887543
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.70 E-value=1.4e-08 Score=76.92 Aligned_cols=38 Identities=26% Similarity=0.113 Sum_probs=34.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+|++|||||++-||.+++++|+ ++|++|+.++|+...
T Consensus 4 kGKvalITGas~GIG~aia~~la-----~~G~~V~~~~r~~~~ 41 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLV-----GQGASAVLLDLPNSG 41 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECTTSS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCChHH
Confidence 57899999999999999999999 799999999998653
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.70 E-value=1.9e-09 Score=82.06 Aligned_cols=88 Identities=17% Similarity=0.140 Sum_probs=61.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC------C----------CC----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------F----------PT---------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------~----------~~---------------- 55 (176)
.+|++|||||++-||++++++|+ +.|++|+..+|+..... . .+
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~-----~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLA-----ARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFG 77 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence 47899999999999999999999 79999999998753210 0 00
Q ss_pred --Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 56 --ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 56 --~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
+.+ .++++..+++|+.++..+.+++...+. ..+-.+|+++||...
T Consensus 78 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~-~~~~G~II~isS~~~ 140 (243)
T d1q7ba_ 78 EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMM-KKRHGRIITIGSVVG 140 (243)
T ss_dssp SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCHHH
T ss_pred CcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHH-HcCCCEeeeecchhh
Confidence 000 224566789999988777776654421 012367999988644
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.70 E-value=9e-09 Score=78.58 Aligned_cols=87 Identities=18% Similarity=0.011 Sum_probs=61.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------CCC---------C-----------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------WFP---------T----------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~---------~----------- 55 (176)
..+|++|||||++-||++++++|+ +.|++|+..+|+.... ... +
T Consensus 3 l~gK~~lITGas~GIG~aia~~la-----~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~ 77 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLA-----EAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV 77 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHH
Confidence 357899999999999999999999 7999999999874321 000 0
Q ss_pred -------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 56 -------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 56 -------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
+.+ .++++..+++|+.++.++.+++...+. ..+-.+++.++|.
T Consensus 78 ~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~-~~~~G~Ii~i~S~ 143 (251)
T d1vl8a_ 78 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLR-ESDNPSIINIGSL 143 (251)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHT-TCSSCEEEEECCG
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccc-ccccccccccccc
Confidence 000 224566789999998887777666532 1123578888774
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.70 E-value=2e-08 Score=78.71 Aligned_cols=36 Identities=22% Similarity=0.076 Sum_probs=33.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||++-||++++++|+ +.|+.|+..+|+.
T Consensus 6 ~gKvalITGas~GIG~aiA~~la-----~~Ga~Vvi~d~~~ 41 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFA-----ERGALVVVNDLGG 41 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEECCCB
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEeCCc
Confidence 47999999999999999999999 7999999988764
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=98.69 E-value=4.9e-09 Score=80.37 Aligned_cols=36 Identities=25% Similarity=0.203 Sum_probs=33.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||++-||.+++++|+ +.|++|+..+|+.
T Consensus 3 ~gK~alITGas~GIG~aiA~~la-----~~Ga~V~~~~r~~ 38 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALA-----AQGADIVLNGFGD 38 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEECCSC
T ss_pred CcCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCc
Confidence 47899999999999999999999 7999999999875
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.69 E-value=5.4e-09 Score=80.06 Aligned_cols=124 Identities=10% Similarity=-0.029 Sum_probs=79.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CC-C---------C----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WF-P---------T---------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~---------~---------------- 55 (176)
.+|++|||||++-||.+++++|+ +.|++|+..+|+.... .. . +
T Consensus 4 ~gK~alVTGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 78 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAV-----AAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999 7999999999975321 00 0 0
Q ss_pred --Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCC
Q 030483 56 --ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 117 (176)
Q Consensus 56 --~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~ 117 (176)
+.+ .++++..+++|+.++.++.+++...+. ..+-.+||++||...+.
T Consensus 79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~-~~~~G~II~isS~~~~~-------------- 143 (254)
T d1hdca_ 79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMK-DAGGGSIVNISSAAGLM-------------- 143 (254)
T ss_dssp CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTS--------------
T ss_pred CccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHh-hcCCCeecccccchhcc--------------
Confidence 000 224566789999988777776654311 01246899998864321
Q ss_pred CCccccCCCCCCCCCcchHHHHH--------HHHh-hCCCceEEEeccCceEe
Q 030483 118 YEVPFKEDSSRLPFPNFYYELED--------VSAS-YSPAITYSVHRSSVIIG 161 (176)
Q Consensus 118 ~~~p~~E~~~~~~~~~~y~~~e~--------~~~~-~~~g~~~~ivRp~~v~G 161 (176)
+. +....|...+. +..| ..+|+++-.+-|+.|--
T Consensus 144 ---~~-------~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T 186 (254)
T d1hdca_ 144 ---GL-------ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYT 186 (254)
T ss_dssp ---CC-------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred ---cc-------cchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccC
Confidence 10 11123433221 1122 46789999999998854
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.67 E-value=5.7e-09 Score=79.88 Aligned_cols=36 Identities=17% Similarity=0.086 Sum_probs=33.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||++-||++++++|+ +.|++|+..+|+.
T Consensus 10 ~gK~alITGas~GIG~aia~~la-----~~Ga~V~~~~r~~ 45 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFA-----TAGASVVVSDINA 45 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----TTTCEEEEEESCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 57999999999999999999999 7999999999874
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.67 E-value=5.5e-09 Score=79.77 Aligned_cols=38 Identities=26% Similarity=0.219 Sum_probs=34.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+..+|.+|||||++-||++++++|+ +.|++|+..+|+.
T Consensus 7 ~lenKvalITGas~GIG~a~a~~la-----~~Ga~V~~~~r~~ 44 (251)
T d2c07a1 7 CGENKVALVTGAGRGIGREIAKMLA-----KSVSHVICISRTQ 44 (251)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHT-----TTSSEEEEEESSH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEECCH
Confidence 3467999999999999999999999 7999999999874
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.67 E-value=5.5e-09 Score=79.56 Aligned_cols=126 Identities=12% Similarity=-0.025 Sum_probs=80.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CC--------C--C----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WF--------P--T---------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~--------~--~---------------- 55 (176)
.+|++|||||++-||++++++|+ +.|++|+..+|+.... .. + +
T Consensus 5 ~gK~alITGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 79 (244)
T d1nffa_ 5 TGKVALVSGGARGMGASHVRAMV-----AEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFG 79 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 56899999999999999999999 7999999999975321 00 0 0
Q ss_pred --Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCC
Q 030483 56 --ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 117 (176)
Q Consensus 56 --~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~ 117 (176)
+.+ .+++++.+++|+.++.++.+++...+. ..+-.+||++||...+.
T Consensus 80 ~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~-~~~~G~Ii~isS~~~~~-------------- 144 (244)
T d1nffa_ 80 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMK-EAGRGSIINISSIEGLA-------------- 144 (244)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTS--------------
T ss_pred CCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHH-hcCcceEEecccccccc--------------
Confidence 000 224567889999987777765544321 01235799998864321
Q ss_pred CCccccCCCCCCCCCcchHHHH----H----HHHh-hCCCceEEEeccCceEeCC
Q 030483 118 YEVPFKEDSSRLPFPNFYYELE----D----VSAS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 118 ~~~p~~E~~~~~~~~~~y~~~e----~----~~~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+. +....|...+ . +..| ..+|+++-.+-|+.|--|.
T Consensus 145 ---~~-------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~ 189 (244)
T d1nffa_ 145 ---GT-------VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 189 (244)
T ss_dssp ---CC-------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGG
T ss_pred ---cc-------ccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChh
Confidence 10 0112233221 1 1122 4678999999999886553
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.66 E-value=1.2e-08 Score=77.00 Aligned_cols=88 Identities=11% Similarity=0.027 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------C-CC----------CCcc------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------W-FP----------TALV------ 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~-~~----------~~~v------ 58 (176)
+.+|++|||||++-||++++++|+ +.|++|+..+|+.... . .. .+.+
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~-----~~Ga~V~~~~r~~~~l~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~ 76 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLS-----QEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGG 76 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHhcCCcEEEcchHHHHHHHHHHhCCCcEEEecccc
Confidence 357899999999999999999999 7999999999974310 0 00 0111
Q ss_pred ----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 59 ----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 59 ----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
.+++++.+++|+.++..+.+++...+. ..+-.+++.++|..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~-~~~~G~ii~i~S~~ 127 (234)
T d1o5ia_ 77 PKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMK-EKGWGRIVAITSFS 127 (234)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGG
T ss_pred cCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccc-cccccccccccccc
Confidence 223556788998887666665544311 01235788777653
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=2.2e-08 Score=76.03 Aligned_cols=38 Identities=18% Similarity=0.170 Sum_probs=34.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..+|++|||||++-||.+++++|+ +.|++|+..+|+..
T Consensus 5 L~GK~~lITGas~GIG~aia~~la-----~~G~~V~~~~r~~~ 42 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALH-----ATGARVVAVSRTQA 42 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEECCHH
Confidence 467999999999999999999999 79999999999753
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.65 E-value=5.4e-09 Score=80.00 Aligned_cols=36 Identities=28% Similarity=0.116 Sum_probs=33.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||++-||++++++|+ +.|++|+..+|+.
T Consensus 4 ~gK~alVTGas~GIG~aia~~la-----~~Ga~V~~~~r~~ 39 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYV-----REGARVAIADINL 39 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHH-----HTTEEEEEEESCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 46899999999999999999999 7999999999974
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=98.65 E-value=6.4e-09 Score=79.76 Aligned_cols=128 Identities=14% Similarity=0.139 Sum_probs=79.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CCC----------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFP---------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~---------------------- 54 (176)
..+|++|||||++-||++++++|+ ++|++|+..+|+.... ...
T Consensus 4 L~gK~alITGas~GIG~aia~~la-----~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~ 78 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELA-----GLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVA 78 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHH
Confidence 357999999999999999999999 7999999999975320 000
Q ss_pred ------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 55 ------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 55 ------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
+..+ .+++...+++|+.++-.+.+++...+. ..+..+++++||.....
T Consensus 79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~-~~~~g~ii~isS~~~~~--------- 148 (258)
T d1ae1a_ 79 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLK-ASQNGNVIFLSSIAGFS--------- 148 (258)
T ss_dssp HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTSEEEEEECCGGGTS---------
T ss_pred HHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccc-ccccccccccccccccc---------
Confidence 0000 224566789999988777766553311 11346888888754321
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHH----HH----HHHh-hCCCceEEEeccCceEeCCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYEL----ED----VSAS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~----e~----~~~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+. + ....|... +. +..| ..+|+++-.+.|+.+.-+..
T Consensus 149 --------~~----~---~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~ 194 (258)
T d1ae1a_ 149 --------AL----P---SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLV 194 (258)
T ss_dssp --------CC----T---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----
T ss_pred --------cc----c---cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcch
Confidence 10 1 11223222 11 1122 46789999999999976543
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=98.63 E-value=7e-09 Score=79.28 Aligned_cols=35 Identities=29% Similarity=0.204 Sum_probs=31.9
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
||.+|||||++-||++++++|+ +.|++|+..+|+.
T Consensus 1 KKValITGas~GIG~aia~~la-----~~Ga~V~~~~r~~ 35 (255)
T d1gega_ 1 KKVALVTGAGQGIGKAIALRLV-----KDGFAVAIADYND 35 (255)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCEEEEcCCccHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 4567999999999999999999 7999999999974
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.63 E-value=3.4e-08 Score=75.39 Aligned_cols=127 Identities=12% Similarity=0.002 Sum_probs=83.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CCC--------C---C----------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WFP--------T---A---------- 56 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~--------~---~---------- 56 (176)
..+|++|||||++-||..++++|+ +.|++|+.++|+.... ... + +
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la-----~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 77 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELV-----KRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKK 77 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHH
Confidence 457999999999999999999999 7999999998875431 000 0 0
Q ss_pred ---------cc--------cCcHHHHHHHHHHHHHHHHHHHHhcCC--CCCCccEEEEeccceeecccccCCCccCCCCC
Q 030483 57 ---------LV--------QESEEVNIFKNSTMLKNVLSVLVSSNS--GRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 117 (176)
Q Consensus 57 ---------~v--------~~~~~~~~~~N~~~t~~ll~a~~~~~~--~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~ 117 (176)
.+ .+++++.+++|+.++.++..++...+. ....-.+|+++||...+.
T Consensus 78 ~~~~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~-------------- 143 (254)
T d1sbya1 78 IFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN-------------- 143 (254)
T ss_dssp HHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--------------
T ss_pred HHHHcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc--------------
Confidence 00 456788999999988777777666431 011236788888754431
Q ss_pred CCccccCCCCCCCCCcchHHHHHH-------H-Hh-hCCCceEEEeccCceEeC
Q 030483 118 YEVPFKEDSSRLPFPNFYYELEDV-------S-AS-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 118 ~~~p~~E~~~~~~~~~~y~~~e~~-------~-~~-~~~g~~~~ivRp~~v~G~ 162 (176)
| . +....|...+.. + .+ ...++++..+.|+.|.-+
T Consensus 144 ---~----~---~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~ 187 (254)
T d1sbya1 144 ---A----I---HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP 187 (254)
T ss_dssp ---C----C---TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred ---C----C---CCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc
Confidence 0 0 111234332211 1 22 456899999999999765
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=98.62 E-value=1.1e-08 Score=78.51 Aligned_cols=37 Identities=24% Similarity=0.260 Sum_probs=33.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..+|++|||||++-||++++++|+ +.|++|+..+|+.
T Consensus 6 L~GK~alITGas~GIG~aia~~la-----~~Ga~V~~~~r~~ 42 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELA-----SLGASVYTCSRNQ 42 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 357899999999999999999999 7999999999974
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.62 E-value=2.1e-07 Score=70.40 Aligned_cols=38 Identities=18% Similarity=0.212 Sum_probs=32.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~ 49 (176)
|.+|+||||||++-||.+++++|+ .+|+ .|++.+|+..
T Consensus 1 M~~KtilITGassGIG~a~a~~la-----~~G~~~~Vi~~~R~~~ 40 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLV-----KDKNIRHIIATARDVE 40 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHH-----TCTTCCEEEEEESSGG
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHH-----HCCCCCEEEEEeCCHH
Confidence 455899999999999999999999 5774 6888888754
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.61 E-value=9.5e-08 Score=71.39 Aligned_cols=36 Identities=28% Similarity=0.200 Sum_probs=33.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
|++|||||++-||++++++|+ +.|++|+..+|+...
T Consensus 2 K~alITGas~GIG~aiA~~la-----~~Ga~V~i~~~~~~~ 37 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALK-----ARGYRVVVLDLRREG 37 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HHTCEEEEEESSCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCccc
Confidence 789999999999999999999 799999999997654
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=98.60 E-value=1.5e-08 Score=77.85 Aligned_cols=38 Identities=24% Similarity=0.106 Sum_probs=34.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..+|++|||||++-||.+++++|+ +.|++|+..+|+..
T Consensus 5 L~gK~alITGas~GIG~aia~~la-----~~G~~Vv~~~r~~~ 42 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFA-----TEKAKVVVNYRSKE 42 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCcH
Confidence 357999999999999999999999 79999999999753
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=98.60 E-value=1.5e-08 Score=77.60 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=34.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
++|++|||||++-||++++++|+ +.|++|+..+|+..+
T Consensus 8 ~gK~alITGas~GIG~aia~~la-----~~Ga~V~i~~r~~~~ 45 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVA-----AAGANVAVIYRSAAD 45 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHH-----HTTEEEEEEESSCTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHH
Confidence 46899999999999999999999 799999999998654
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.60 E-value=1.1e-08 Score=78.42 Aligned_cols=37 Identities=22% Similarity=0.174 Sum_probs=34.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||++-||.+++++|+ +.|++|+.++|+.
T Consensus 6 LkgK~alVTGas~GIG~aiA~~la-----~~Ga~V~~~~r~~ 42 (259)
T d1xq1a_ 6 LKAKTVLVTGGTKGIGHAIVEEFA-----GFGAVIHTCARNE 42 (259)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 467999999999999999999999 7999999999874
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.60 E-value=3.1e-08 Score=76.06 Aligned_cols=37 Identities=27% Similarity=0.107 Sum_probs=33.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..+|++|||||++-||.+++++|+ +.|++|+..+|+.
T Consensus 4 L~gKvalITGas~GIG~aia~~la-----~~Ga~V~i~~r~~ 40 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFV-----RYGAKVVIADIAD 40 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 467999999999999999999999 7999999999864
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.59 E-value=2.3e-08 Score=76.26 Aligned_cols=87 Identities=11% Similarity=-0.005 Sum_probs=60.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CCC---------C-----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WFP---------T----------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~---------~----------------- 55 (176)
.+|++|||||++-||++++++|+ +.|++|+..+|+.... ... +
T Consensus 5 ~GK~alITGas~GIG~aia~~la-----~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~ 79 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFV-----NSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGR 79 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 57899999999999999999999 7999999999974320 000 0
Q ss_pred -Ccc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 56 -ALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 56 -~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
+.+ .+++++.+++|+.++.++.+++...+... + .+++.+||...
T Consensus 80 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~-G~Ii~isS~~~ 141 (250)
T d1ydea1 80 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-Q-GNVINISSLVG 141 (250)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCHHH
T ss_pred CCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-C-CCCcccccccc
Confidence 000 12345678999998877777666542101 2 57888887543
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=98.59 E-value=2.7e-08 Score=75.85 Aligned_cols=88 Identities=15% Similarity=-0.000 Sum_probs=60.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CCC------C-----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WFP------T----------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~------~----------------- 55 (176)
.+|++|||||++-||++++++|+ +.|++|+..+|+.... ... +
T Consensus 5 ~gK~alVTGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFV-----EEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999 7999999999864310 000 0
Q ss_pred ----Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 56 ----ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 56 ----~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
+.+ .+++...+++|+.++.++.+++...+.....-.+|+.+||..
T Consensus 80 ~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~ 144 (251)
T d1zk4a1 80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIE 144 (251)
T ss_dssp HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGG
T ss_pred hCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccc
Confidence 000 223456789999998888777665422111124788888753
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.58 E-value=1.3e-08 Score=78.23 Aligned_cols=36 Identities=19% Similarity=0.113 Sum_probs=33.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++||||||+-||.+++++|+ +.|++|++++|+.
T Consensus 13 ~GK~alITGassGIG~aiA~~la-----~~G~~Vil~~r~~ 48 (269)
T d1xu9a_ 13 QGKKVIVTGASKGIGREMAYHLA-----KMGAHVVVTARSK 48 (269)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 47899999999999999999999 7999999999974
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.57 E-value=4.2e-08 Score=74.35 Aligned_cols=36 Identities=28% Similarity=0.206 Sum_probs=33.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||++-||++++++|+ +.|++|+..+|+.
T Consensus 4 ~GK~alITGas~GIG~aia~~la-----~~Ga~V~~~~r~~ 39 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALH-----ASGAKVVAVTRTN 39 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 57999999999999999999999 7999999999974
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.57 E-value=9.9e-09 Score=78.66 Aligned_cols=36 Identities=22% Similarity=0.148 Sum_probs=33.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||++-||+++++.|+ +.|++|+..+|+.
T Consensus 4 ~gK~alITGas~GIG~aia~~la-----~~Ga~V~~~~r~~ 39 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLA-----EEGTAIALLDMNR 39 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 57899999999999999999999 7999999999874
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.57 E-value=2e-08 Score=76.74 Aligned_cols=87 Identities=20% Similarity=0.110 Sum_probs=60.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CC-C---------C--------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WF-P---------T-------------- 55 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~-~---------~-------------- 55 (176)
+|.+|||||++-||.+++++|+ +.|++|+..+|+.... .. . +
T Consensus 2 gKValITGas~GIG~aia~~la-----~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~ 76 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLG-----KEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER 76 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 5788999999999999999999 7999999999974320 00 0 0
Q ss_pred ----Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCC-CCCCccEEEEeccce
Q 030483 56 ----ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNS-GRSRLRHVALLTGTK 100 (176)
Q Consensus 56 ----~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~-~~~~v~~vv~~Ss~~ 100 (176)
+.+ .++++..+++|+.++.++.+++...+. ...+-.+++.+||..
T Consensus 77 ~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~ 142 (257)
T d2rhca1 77 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG 142 (257)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGG
T ss_pred hCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccc
Confidence 000 224567899999999988888764310 011235788887753
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.55 E-value=5.7e-08 Score=73.69 Aligned_cols=87 Identities=8% Similarity=0.030 Sum_probs=59.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----CCC------C-----------------Cc-
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WFP------T-----------------AL- 57 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~------~-----------------~~- 57 (176)
..+|++|||||++-||+++++.|+ +.|++|++.+|++... ... + +.
T Consensus 4 l~gK~alITGas~GIG~aia~~la-----~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~l 78 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFA-----REGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVL 78 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeE
Confidence 356899999999999999999999 7999999999975321 000 0 00
Q ss_pred c---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 58 V---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 58 v---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
| .+.+...+++|+.++..+.+++...+. ..+-.+++++||.
T Consensus 79 Vn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~-~~~~g~Ii~isS~ 134 (245)
T d2ag5a1 79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKML-AQKSGNIINMSSV 134 (245)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCS
T ss_pred EecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccc-cCCCceeeeeech
Confidence 0 123456789999988777766654310 1123578888764
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.54 E-value=5.3e-07 Score=68.06 Aligned_cols=39 Identities=31% Similarity=0.445 Sum_probs=32.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
|+||||||++-||.+++++|++ -...|+.|++.+|+...
T Consensus 3 KtilITGas~GIG~a~a~~l~~--~a~~g~~V~~~~r~~~~ 41 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLN--LPQPPQHLFTTCRNREQ 41 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHT--SSSCCSEEEEEESCTTS
T ss_pred CEEEEeCCCCHHHHHHHHHHHH--HHhCCCEEEEEECCHHH
Confidence 6899999999999999999961 00479999999998654
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.54 E-value=5.1e-08 Score=74.91 Aligned_cols=37 Identities=24% Similarity=0.149 Sum_probs=33.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+|++|||||++-||++++++|+ +.|++|+..+|+..
T Consensus 17 ~gK~~lITGas~GIG~aia~~la-----~~Ga~Vvi~~~~~~ 53 (272)
T d1g0oa_ 17 EGKVALVTGAGRGIGREMAMELG-----RRGCKVIVNYANST 53 (272)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEeCCch
Confidence 46999999999999999999999 79999999888743
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=98.53 E-value=2e-08 Score=76.88 Aligned_cols=36 Identities=22% Similarity=0.069 Sum_probs=33.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||++-||++++++|+ +.|++|...+|+.
T Consensus 3 ~gK~alITGas~GIG~aia~~la-----~~Ga~V~i~~r~~ 38 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLA-----AEGAKLSLVDVSS 38 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 46899999999999999999999 7999999999874
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.52 E-value=5.2e-08 Score=74.29 Aligned_cols=87 Identities=15% Similarity=0.022 Sum_probs=62.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CC-------C--C---------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WF-------P--T--------------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-------~--~--------------- 55 (176)
..+|++|||||++-||.+++++|+ +.|++|+..+|+.... .. . +
T Consensus 4 L~gK~alITGas~GIG~aia~~la-----~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 78 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLL-----GEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence 457999999999999999999999 7999999999874320 00 0 0
Q ss_pred ---Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 56 ---ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 56 ---~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
+.+ .++++..+++|+.++-++.+++...+. . +-.+|+++||..
T Consensus 79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~-~-~~G~Iv~isS~~ 140 (253)
T d1hxha_ 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMK-E-TGGSIINMASVS 140 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHT-T-TCEEEEEECCGG
T ss_pred CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHH-h-cCCceecccchh
Confidence 000 224567889999988777777666532 1 226899998754
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.52 E-value=6.6e-07 Score=67.91 Aligned_cols=88 Identities=17% Similarity=0.047 Sum_probs=60.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC----------CCCC--------C---------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP----------GWFP--------T--------------- 55 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----------~~~~--------~--------------- 55 (176)
+|++|||||++-||++++++|+ +.|++|+.++|+... .... +
T Consensus 3 GKvalITGas~GIG~aia~~la-----~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (254)
T d2gdza1 3 GKVALVTGAAQGIGRAFAEALL-----LKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV 77 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 6899999999999999999999 799999999997432 0000 0
Q ss_pred ------Ccc--------cCcHHHHHHHHHHHHHHHHHHHHhcCCC-C-CCccEEEEecccee
Q 030483 56 ------ALV--------QESEEVNIFKNSTMLKNVLSVLVSSNSG-R-SRLRHVALLTGTKH 101 (176)
Q Consensus 56 ------~~v--------~~~~~~~~~~N~~~t~~ll~a~~~~~~~-~-~~v~~vv~~Ss~~~ 101 (176)
+.+ ..++++.+++|+.++.++..++...+.. . ..-.+|+.+||...
T Consensus 78 ~~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~ 139 (254)
T d2gdza1 78 DHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG 139 (254)
T ss_dssp HHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred HHcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh
Confidence 000 4567888999998776665555443210 1 11256888887543
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.50 E-value=1.2e-07 Score=72.18 Aligned_cols=92 Identities=15% Similarity=-0.017 Sum_probs=62.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CCC-----------C----------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFP-----------T---------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~-----------~---------- 55 (176)
+.+|.+|||||++-||.+++++|.+. -.+|+.|+.++|+.... ... +
T Consensus 4 L~gKvalITGas~GIG~aiA~~lA~~--~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~ 81 (259)
T d1oaaa_ 4 LGCAVCVLTGASRGFGRALAPQLARL--LSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTT--BCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHhc--ccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 45788999999999999999999610 03799999999875320 000 0
Q ss_pred -------C-----cc-------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCC-CccEEEEeccce
Q 030483 56 -------A-----LV-------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRS-RLRHVALLTGTK 100 (176)
Q Consensus 56 -------~-----~v-------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~-~v~~vv~~Ss~~ 100 (176)
. .+ .+++...+++|+.++.++.+++...+.... .-.+|+++||..
T Consensus 82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~ 158 (259)
T d1oaaa_ 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC 158 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGG
T ss_pred HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccc
Confidence 0 00 112456789999999999998887643111 135788888754
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.50 E-value=4.9e-08 Score=74.24 Aligned_cols=42 Identities=29% Similarity=0.276 Sum_probs=35.1
Q ss_pred CCcCCCCCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 1 MEKQDQNPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|-..+ +.+|++|||||+| -||++++++|+ +.|++|+..+|+.
T Consensus 1 M~~~~-L~gK~alITGas~~~GIG~aiA~~la-----~~Ga~V~i~~~~~ 44 (256)
T d1ulua_ 1 MLTVD-LSGKKALVMGVTNQRSLGFAIAAKLK-----EAGAEVALSYQAE 44 (256)
T ss_dssp CEEEC-CTTCEEEEESCCCSSSHHHHHHHHHH-----HTTCEEEEEESSG
T ss_pred CCCcC-CCCCEEEEECCCCCchHHHHHHHHHH-----HCCCEEEEEeCcH
Confidence 44444 5789999999987 69999999999 7999998888764
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.49 E-value=5.8e-08 Score=75.26 Aligned_cols=32 Identities=31% Similarity=0.447 Sum_probs=26.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
+|.||||||++-||++++++|+ +.|.+|+.+.
T Consensus 2 kkVvlITGassGIG~a~A~~la-----~~Ga~v~~v~ 33 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLA-----SDPSQSFKVY 33 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHH-----TCTTCCEEEE
T ss_pred CCEEEEccCCCHHHHHHHHHHH-----HCCCCeEEEE
Confidence 4668999999999999999999 6887755443
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.48 E-value=7.4e-08 Score=73.47 Aligned_cols=38 Identities=21% Similarity=0.025 Sum_probs=33.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|..+|++|||||++-||.+++++|+ ++|++|+...|+.
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la-----~~G~~Vvi~~~~~ 40 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELG-----RRGASVVVNYGSS 40 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEcCCC
Confidence 5678999999999999999999999 7999998876654
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.48 E-value=1.8e-08 Score=76.69 Aligned_cols=38 Identities=16% Similarity=-0.063 Sum_probs=34.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
-.+|++|||||++-||++++++|+ +.|++|+.++|+..
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la-----~~G~~V~l~~r~~~ 42 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFA-----KLKSKLVLWDINKH 42 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 467999999999999999999999 79999999999753
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.47 E-value=2.3e-08 Score=75.75 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-------EEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWK-------VYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-------V~~l~R~~ 48 (176)
+.||||||++-||++++++|. +.|++ |...+|+.
T Consensus 2 ~VvlITGas~GIG~aia~~la-----~~G~~~~~~~~~v~~~~r~~ 42 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFA-----RAARHHPDFEPVLVLSSRTA 42 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHH-----HHTTTCTTCCEEEEEEESCH
T ss_pred CEEEEccCCCHHHHHHHHHHH-----HhCccccccCcEEEEEeCCH
Confidence 458999999999999999999 68886 78888864
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.46 E-value=3.7e-08 Score=74.78 Aligned_cols=33 Identities=24% Similarity=0.238 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|||||++-||++++++|+ +.|++|+..+++
T Consensus 2 pV~lITGas~GIG~a~a~~la-----~~Ga~V~i~~~~ 34 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLG-----KAGCKVLVNYAR 34 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESS
T ss_pred CEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCC
Confidence 579999999999999999999 799999876554
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.45 E-value=5.4e-08 Score=75.94 Aligned_cols=36 Identities=22% Similarity=0.164 Sum_probs=33.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||++-||.+++++|+ +.|++|+..+|+.
T Consensus 11 ~gKvalITGas~GIG~aia~~la-----~~Ga~Vvi~~r~~ 46 (297)
T d1yxma1 11 QGQVAIVTGGATGIGKAIVKELL-----ELGSNVVIASRKL 46 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 57999999999999999999999 7999999999874
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.43 E-value=5.1e-08 Score=75.12 Aligned_cols=36 Identities=19% Similarity=0.100 Sum_probs=33.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||++-||++++++|+ +.|++|+..+|+.
T Consensus 3 ~gK~alITGas~GIG~aia~~la-----~~Ga~V~~~~r~~ 38 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFA-----KEGAQVTITGRNE 38 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 47899999999999999999999 7999999999874
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.36 E-value=1.1e-07 Score=71.87 Aligned_cols=37 Identities=11% Similarity=0.106 Sum_probs=34.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+|++|||||++-||.+++++|+ ++|++|+..+|+..
T Consensus 4 ~gK~alItGas~GIG~aia~~l~-----~~G~~V~~~~r~~~ 40 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFA-----REGASLVAVDREER 40 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 46899999999999999999999 79999999999754
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.35 E-value=1.5e-07 Score=72.47 Aligned_cols=38 Identities=18% Similarity=0.092 Sum_probs=34.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..+|++|||||++-||++++++|+ +.|++|+..+|+..
T Consensus 3 L~gK~alITGas~GIG~aia~~la-----~~Ga~V~i~~r~~~ 40 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFV-----AEGAKVAVLDKSAE 40 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 356899999999999999999999 79999999999753
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.34 E-value=1e-07 Score=72.90 Aligned_cols=36 Identities=25% Similarity=0.195 Sum_probs=33.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||++-||++++++|+ +.|++|+..+|+.
T Consensus 4 ~gKvalVTGas~GIG~aia~~la-----~~Ga~V~~~~r~~ 39 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFA-----REGAKVTITGRHA 39 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 57899999999999999999999 7999999999974
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.34 E-value=1.1e-07 Score=73.00 Aligned_cols=36 Identities=17% Similarity=0.107 Sum_probs=33.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||++-||++++++|+ +.|++|+..+|+.
T Consensus 4 ~gK~alVTGas~GIG~aia~~la-----~~Ga~V~l~~r~~ 39 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFA-----QEGANVTITGRSS 39 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESCH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 56899999999999999999999 7999999999874
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.33 E-value=3.1e-07 Score=69.75 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=31.2
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|||||++.||.+++++|+ +.|++|...+|+..
T Consensus 2 TAlVTGas~GiG~aiA~~la-----~~Ga~V~i~~r~~~ 35 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLS-----EAGHTVACHDESFK 35 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHH-----HTTCEEEECCGGGG
T ss_pred EEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 78999999999999999999 79999999988644
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=98.33 E-value=2.5e-07 Score=69.97 Aligned_cols=38 Identities=13% Similarity=0.087 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..+|++|||||+| -||+++++.|+ ++|++|+..+|+..
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~-----~~G~~V~i~~~~~~ 42 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMH-----REGAELAFTYQNDK 42 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHH-----HTTCEEEEEESSTT
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 3579999999998 69999999999 79999999998754
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.21 E-value=2.9e-07 Score=70.15 Aligned_cols=37 Identities=35% Similarity=0.428 Sum_probs=33.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+|++|||||++-||.++++.|+ +.|++|+..+|+..
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la-----~~G~~Vv~~~r~~~ 45 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALV-----QQGLKVVGCARTVG 45 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 46899999999999999999999 79999999998753
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.04 E-value=2e-06 Score=62.44 Aligned_cols=38 Identities=24% Similarity=0.224 Sum_probs=34.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..+|++|||||+|.||..+++.|+ ..|++|+.++|+..
T Consensus 21 l~gK~vlItGasgGIG~~ia~~la-----~~G~~V~~~~r~~~ 58 (191)
T d1luaa1 21 VKGKKAVVLAGTGPVGMRSAALLA-----GEGAEVVLCGRKLD 58 (191)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----hhccchhhcccchH
Confidence 467999999999999999999999 79999999999754
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.98 E-value=5.9e-07 Score=68.80 Aligned_cols=85 Identities=20% Similarity=0.127 Sum_probs=58.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CCCC-----C------------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFPT-----A------------------ 56 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~-----~------------------ 56 (176)
+.+|||||++-||.+++++|++ ..|+.|+..+|+.... .... +
T Consensus 4 rVAlVTGas~GIG~a~A~~la~----~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~ 79 (275)
T d1wmaa1 4 HVALVTGGNKGIGLAIVRDLCR----LFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY 79 (275)
T ss_dssp CEEEESSCSSHHHHHHHHHHHH----HSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred eEEEECCCCCHHHHHHHHHHHH----hCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc
Confidence 4459999999999999999983 3589999999975321 0000 0
Q ss_pred ----cc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 57 ----LV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 57 ----~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
.+ .+++...+++|+.++..+.+++...+. +-.+++.+||...
T Consensus 80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~---~~g~ivnisS~~~ 141 (275)
T d1wmaa1 80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIK---PQGRVVNVSSIMS 141 (275)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEECCHHH
T ss_pred CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCcccccccce
Confidence 00 112345788999999999988877632 2257888888544
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.93 E-value=4.4e-06 Score=62.65 Aligned_cols=36 Identities=19% Similarity=0.270 Sum_probs=32.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
|.||||||++-||++++++|+ +.|++|++++|+...
T Consensus 2 kVvlITGas~GIG~aiA~~la-----~~Ga~V~~~~~~~~~ 37 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLE-----AAGHQIVGIDIRDAE 37 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSSSS
T ss_pred CEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECChHH
Confidence 678999999999999999999 799999999997653
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=97.88 E-value=7e-06 Score=63.05 Aligned_cols=36 Identities=22% Similarity=0.119 Sum_probs=33.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+|++|||||+|.||++++++|+ +.|++|+.++|+..
T Consensus 25 gK~alITGas~GIG~aiA~~la-----~~Ga~Vii~~r~~~ 60 (294)
T d1w6ua_ 25 GKVAFITGGGTGLGKGMTTLLS-----SLGAQCVIASRKMD 60 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEECCHH
Confidence 4899999999999999999999 79999999999853
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.88 E-value=5.9e-06 Score=58.46 Aligned_cols=35 Identities=26% Similarity=0.234 Sum_probs=32.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|||.|+||+|.+|++|++.|. +.|++|+..+|++.
T Consensus 1 Mki~vigGaG~iG~alA~~la-----~~G~~V~l~~R~~e 35 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLA-----TLGHEIVVGSRREE 35 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----TTTCEEEEEESSHH
T ss_pred CEEEEEeCCcHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 579999999999999999999 79999999999864
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=97.75 E-value=1.6e-05 Score=60.21 Aligned_cols=37 Identities=14% Similarity=0.057 Sum_probs=33.3
Q ss_pred CCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+|++|||||+| -||.+++++|+ ++|++|+..+|+..
T Consensus 4 ~gK~alITGaag~~GIG~AiA~~la-----~~Ga~V~i~~r~~~ 42 (274)
T d2pd4a1 4 KGKKGLIVGVANNKSIAYGIAQSCF-----NQGATLAFTYLNES 42 (274)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHH-----TTTCEEEEEESSTT
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 579999999887 69999999999 79999999999753
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.66 E-value=2.4e-05 Score=54.88 Aligned_cols=35 Identities=26% Similarity=0.261 Sum_probs=31.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.|+|||.|| |++|+++++.|. +.||+|+.++|+..
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~-----~~g~~V~v~dr~~~ 36 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLT-----DSGIKVTVACRTLE 36 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHH-----TTTCEEEEEESCHH
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEECChH
Confidence 578999986 999999999999 78999999999854
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.48 E-value=7.9e-05 Score=51.47 Aligned_cols=37 Identities=22% Similarity=0.153 Sum_probs=33.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++|.|.||.|.+|+.+++.|. +.||+|++++|+...
T Consensus 9 ~~kI~iIGg~G~mG~~la~~L~-----~~G~~V~~~d~~~~~ 45 (152)
T d2pv7a2 9 IHKIVIVGGYGKLGGLFARYLR-----ASGYPISILDREDWA 45 (152)
T ss_dssp CCCEEEETTTSHHHHHHHHHHH-----TTTCCEEEECTTCGG
T ss_pred CCeEEEEcCCCHHHHHHHHHHH-----HcCCCcEeccccccc
Confidence 3689999999999999999999 799999999997653
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=97.41 E-value=5.1e-05 Score=56.77 Aligned_cols=35 Identities=26% Similarity=0.250 Sum_probs=32.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+++|||||++-||.+++++|+ +.|++|+.++|+..
T Consensus 2 ~vAlVTGas~GIG~aia~~la-----~~G~~Vvi~~r~~~ 36 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLH-----QQGFRVVVHYRHSE 36 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCH
T ss_pred CEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCch
Confidence 478999999999999999999 79999999998753
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.40 E-value=6.1e-05 Score=57.38 Aligned_cols=36 Identities=17% Similarity=0.157 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|++|||||+| -||.+++++|+ +.|++|+..+|+
T Consensus 6 L~gK~alVTGass~~GIG~aiA~~la-----~~Ga~Vvi~~~~ 43 (297)
T d1d7oa_ 6 LRGKRAFIAGIADDNGYGWAVAKSLA-----AAGAEILVGTWV 43 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHH-----HTTCEEEEEEEH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHH-----HCCCEEEEEeCc
Confidence 4689999999987 79999999999 799999988764
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=97.37 E-value=7.5e-05 Score=56.01 Aligned_cols=38 Identities=8% Similarity=-0.025 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+.+|++|||||+| .||.+++++|. +.|++|+..+|+..
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la-----~~Ga~Vil~~~~~~ 43 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQ-----EQGAQLVLTGFDRL 43 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHH-----HTTCEEEEEECSCH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHH-----HcCCEEEEEeCChH
Confidence 3579999999765 49999999999 79999999888653
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.36 E-value=6.9e-05 Score=50.68 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=30.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|+|+|+ |.+|++|++.|. +.|++|+++++++.
T Consensus 1 M~IvI~G~-G~~G~~la~~L~-----~~g~~v~vid~d~~ 34 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLS-----EKGHDIVLIDIDKD 34 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCHH
T ss_pred CEEEEECC-CHHHHHHHHHHH-----HCCCCcceecCChh
Confidence 58999997 999999999999 79999999988753
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.21 E-value=0.00017 Score=49.93 Aligned_cols=35 Identities=29% Similarity=0.331 Sum_probs=32.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
|||+|.|+ |-+|+.++..|. +.|++|+.++|++..
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~-----~~G~~V~~~~r~~~~ 35 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALC-----KQGHEVQGWLRVPQP 35 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSSCCS
T ss_pred CEEEEECc-CHHHHHHHHHHH-----HCCCceEEEEcCHHH
Confidence 58999998 999999999999 799999999998764
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=97.16 E-value=0.00016 Score=54.54 Aligned_cols=34 Identities=32% Similarity=0.383 Sum_probs=30.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|||||++-||.+++++|+ +.|++|+..+|+.
T Consensus 3 pVAlITGas~GIG~aiA~~la-----~~Ga~V~i~~~~~ 36 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLH-----AEGYAVCLHYHRS 36 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSC
T ss_pred CEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEeCCC
Confidence 578999999999999999999 7999998877753
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.08 E-value=0.00015 Score=44.78 Aligned_cols=37 Identities=16% Similarity=0.257 Sum_probs=32.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+.++||+||+|-+|+..++.+. ..|++|+++++++.
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak-----~~G~~Vi~~t~s~~ 67 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLH-----KLGYQVVAVSGRES 67 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHH-----HTTCCEEEEESCGG
T ss_pred CCCcEEEEeCCCcHHHHHHHHHH-----HcCCeEEEEECCHH
Confidence 45789999999999999999888 68999999998754
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.64 E-value=0.0015 Score=44.92 Aligned_cols=69 Identities=17% Similarity=0.082 Sum_probs=50.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCC--------------CC--CC----------------C
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPP--------------GW--FP----------------T 55 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~--------------~~--~~----------------~ 55 (176)
|||.|+||+|.+|++++..|+ ..+ -++..+++.+.. .. .. .
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~-----~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~a 75 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLA-----KEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDES 75 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----TCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTC
T ss_pred CEEEEECCCChHHHHHHHHHH-----hCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccc
Confidence 579999999999999999998 566 378888765310 00 00 0
Q ss_pred Ccc----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 56 ALV----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 56 ~~v----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
+.+ ..+..+.+..|....+.+++.+.+.
T Consensus 76 DvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~ 113 (145)
T d1hyea1 76 DVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI 113 (145)
T ss_dssp SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhcc
Confidence 111 2245678899999999999999888
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.60 E-value=0.0051 Score=42.02 Aligned_cols=68 Identities=19% Similarity=0.237 Sum_probs=48.8
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCC------C----CC----------------CCcc----
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPG------W----FP----------------TALV---- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~------~----~~----------------~~~v---- 58 (176)
||.|+||+|.+|++++..|. .++. ++..++..+... . .. .+.+
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~-----~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVita 76 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLK-----NSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPA 76 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHH-----TCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECC
T ss_pred eEEEECCCChHHHHHHHHHH-----hCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECC
Confidence 78999999999999999998 4554 577777643210 0 00 0111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|+..++.+++.+.++
T Consensus 77 g~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~ 107 (144)
T d1mlda1 77 GVPRKPGMTRDDLFNTNATIVATLTAACAQH 107 (144)
T ss_dssp SCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 2244667899999999999999998
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.56 E-value=0.0089 Score=41.02 Aligned_cols=21 Identities=24% Similarity=0.289 Sum_probs=19.9
Q ss_pred CeEEEEcCChHHHHHHHHHhh
Q 030483 10 SVALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~ 30 (176)
+||.|+||+|++|++++..|+
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~ 25 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIA 25 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH
Confidence 389999999999999999998
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.54 E-value=0.0012 Score=45.46 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=26.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc---EEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW---KVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~---~V~~l~R~~~ 49 (176)
++|.|.||||++|+.+++.|++ ...| +++.++++..
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~----~~~~p~~~l~~~~ss~s 40 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVE----ERDFDAIRPVFFSTSQL 40 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH----TTGGGGSEEEEEESSST
T ss_pred cEEEEECCccHHHHHHHHHHHh----CCCCCeeEEEEeecccc
Confidence 4799999999999999998873 3333 3666665543
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.51 E-value=0.0015 Score=46.25 Aligned_cols=74 Identities=9% Similarity=-0.002 Sum_probs=46.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCC--CCCCcEEEEEecCCCCC-------------CCC----------------CCcc
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTT--PGSPWKVYGAARRPPPG-------------WFP----------------TALV 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~--~~~g~~V~~l~R~~~~~-------------~~~----------------~~~v 58 (176)
.||.||||+|.||++|+-.|++..- .....+++.++...... ... .+++
T Consensus 25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aDvV 104 (175)
T d7mdha1 25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDWA 104 (175)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEE
T ss_pred cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCceE
Confidence 3799999999999999999983000 01112455555432210 000 0111
Q ss_pred ----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+....+..|....+.+.+++.+.
T Consensus 105 vi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~ 139 (175)
T d7mdha1 105 LLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 139 (175)
T ss_dssp EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 2355678899999999999999997
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.47 E-value=0.0013 Score=45.58 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|||.|.| .|.+|+.+++.|. +.||+|++++|++
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~-----~~g~~V~~~d~~~ 33 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLR-----RRGHYLIGVSRQQ 33 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCH
T ss_pred CEEEEEe-ecHHHHHHHHHHH-----HCCCEEEEEECCc
Confidence 5789997 5999999999999 7999999999975
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.25 E-value=0.002 Score=46.16 Aligned_cols=37 Identities=16% Similarity=0.154 Sum_probs=33.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
||-++|.|.|+ |.+|+.++..++ ..||+|+.+++++.
T Consensus 2 ~~IkkvaViGa-G~mG~~iA~~~a-----~~G~~V~l~D~~~~ 38 (192)
T d1f0ya2 2 IIVKHVTVIGG-GLMGAGIAQVAA-----ATGHTVVLVDQTED 38 (192)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred ceeEEEEEECc-CHHHHHHHHHHH-----hCCCcEEEEECChH
Confidence 66689999997 999999999999 79999999998753
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.24 E-value=0.0077 Score=41.15 Aligned_cols=82 Identities=17% Similarity=0.152 Sum_probs=53.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------C--CC-----------------CCcc-----
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------W--FP-----------------TALV----- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~-----------------~~~v----- 58 (176)
|||.|+|++|.+|++++..|... .....++..++..+... . .. .+.+
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~--~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG 78 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQ--LPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAG 78 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--SCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCS
T ss_pred CEEEEEcCCChHHHHHHHHHHhC--CCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCC
Confidence 58999999999999999887520 02346788888654210 0 00 0111
Q ss_pred -----cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEec
Q 030483 59 -----QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 97 (176)
Q Consensus 59 -----~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~S 97 (176)
..+..+.+..|....+.+.+.+.+. ++. ..++.+|
T Consensus 79 ~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~---~p~-aivivvt 118 (145)
T d2cmda1 79 VRRKPGMDRSDLFNVNAGIVKNLVQQVAKT---CPK-ACIGIIT 118 (145)
T ss_dssp CCCCTTCCGGGGHHHHHHHHHHHHHHHHHH---CTT-SEEEECS
T ss_pred ccCCCCcchhhHHHHHHHHHHHHHHHHHhh---CCC-cEEEEcc
Confidence 2244567899999999999999998 544 2244443
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.21 E-value=0.0021 Score=45.37 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=26.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
++|.|.||||++|..|++.|.+ ...+++..+.
T Consensus 2 ikVaIiGATGyvG~eLlrlL~~----HP~~ei~~l~ 33 (179)
T d2g17a1 2 LNTLIVGASGYAGAELVSYVNR----HPHMTITALT 33 (179)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH----CTTEEEEEEE
T ss_pred cEEEEECcccHHHHHHHHHHHh----CCCCceEeeE
Confidence 5899999999999999999984 3467776653
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.20 E-value=0.0044 Score=43.93 Aligned_cols=34 Identities=15% Similarity=0.345 Sum_probs=27.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
.+.||.|.||||++|..|++.|.+ ...+++..+.
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~----HP~~ei~~l~ 37 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLAN----HPQFRIKVMT 37 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTT----CSSEEEEEEE
T ss_pred CccEEEEECcccHHHHHHHHHHHh----CCCceEEEEe
Confidence 356899999999999999999994 3556776664
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.19 E-value=0.0081 Score=40.83 Aligned_cols=68 Identities=19% Similarity=0.081 Sum_probs=46.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCCC-------C-----C--------------CCcc---
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-------F-----P--------------TALV--- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~~-------~-----~--------------~~~v--- 58 (176)
+||-|+|+ |.+|+.++..|+ ..+. ++..+++...... . . .+.+
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~-----~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~adivvit 75 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMA-----LRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVT 75 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHH-----HTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEEC
T ss_pred CeEEEECC-CHHHHHHHHHHH-----hcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCCceEEEe
Confidence 57889997 999999999998 3443 7999887654321 0 0 0011
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|+...+.+++.+.+.
T Consensus 76 ag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~ 107 (142)
T d1y6ja1 76 AGANRKPGETRLDLAKKNVMIAKEVTQNIMKY 107 (142)
T ss_dssp CCC------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCcCcchhHHhhHHHHHHHHHHHHhhcc
Confidence 2234567889999999999999998
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.19 E-value=0.0015 Score=44.98 Aligned_cols=71 Identities=21% Similarity=0.290 Sum_probs=49.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCC------------CCC---------------CCc
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPG------------WFP---------------TAL 57 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~------------~~~---------------~~~ 57 (176)
+.++||-|+|+ |.+|++++..|+ ..+. ++..+++.+... ... .+.
T Consensus 4 ~~~~KI~IiGa-G~vG~~~a~~l~-----~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~daDv 77 (148)
T d1ldna1 4 NGGARVVVIGA-GFVGASYVFALM-----NQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADL 77 (148)
T ss_dssp TTSCEEEEECC-SHHHHHHHHHHH-----HHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSE
T ss_pred CCCCeEEEECc-CHHHHHHHHHHH-----hcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhcccee
Confidence 34578999996 999999999998 4554 788888754210 000 011
Q ss_pred c----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 58 V----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 58 v----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
+ ..+..+.+..|....+.+.+.+.++
T Consensus 78 vvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~ 113 (148)
T d1ldna1 78 VVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS 113 (148)
T ss_dssp EEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccccccCcchhHHHHHHHHHHHHHHHHHHhh
Confidence 1 2233567889999999999999998
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.17 E-value=0.0013 Score=43.98 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=29.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+++|.|+ |-+|+++++.|. +.|++|++++.++.
T Consensus 1 k~~iIiG~-G~~G~~la~~L~-----~~g~~vvvid~d~~ 34 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELH-----RMGHEVLAVDINEE 34 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHH-----HTTCCCEEEESCHH
T ss_pred CEEEEECC-CHHHHHHHHHHH-----HCCCeEEEecCcHH
Confidence 56888876 899999999999 79999999987643
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.03 E-value=0.0041 Score=43.34 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=32.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+.+|||+||+|-+|...++.+. ..|.+|+++++++.
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~-----~~G~~vi~~~~~~~ 64 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIAR-----AYGLKILGTAGTEE 64 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESSHH
T ss_pred CCCEEEEEecccccccccccccc-----ccCccccccccccc
Confidence 56799999999999999999888 68999999988653
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=95.93 E-value=0.0043 Score=43.91 Aligned_cols=34 Identities=41% Similarity=0.429 Sum_probs=27.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++|.|.||||++|..|++.|.+ ....++..+.-+
T Consensus 2 ikVaIvGATGyvG~eLirlL~~----HP~~ei~~l~s~ 35 (176)
T d1vkna1 2 IRAGIIGATGYTGLELVRLLKN----HPEAKITYLSSR 35 (176)
T ss_dssp EEEEEESTTSHHHHHHHHHHHH----CTTEEEEEEECS
T ss_pred eEEEEECCCcHHHHHHHHHHHh----CCCceEEEeecc
Confidence 5899999999999999999984 355777776543
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=95.91 E-value=0.0025 Score=44.66 Aligned_cols=37 Identities=22% Similarity=0.250 Sum_probs=32.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
+.+|||+||+|-+|...++... ..|.+|+++++++.+
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk-----~~Ga~Viat~~s~~k 60 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLN-----KRGYDVVASTGNREA 60 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHH-----HHTCCEEEEESSSST
T ss_pred CCEEEEeCCcchHHHHHHHHHH-----HcCCceEEEecCHHH
Confidence 4579999999999999998888 699999999998654
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=95.91 E-value=0.0014 Score=45.16 Aligned_cols=22 Identities=18% Similarity=0.305 Sum_probs=20.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhC
Q 030483 10 SVALIIGVTGISGLSLAEALKN 31 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~ 31 (176)
|||.|.||||++|+.|++.|++
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~ 22 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVE 22 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHh
Confidence 5799999999999999998873
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=95.87 E-value=0.0033 Score=43.74 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=31.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.||+.|.|+ |-+|..++..|. ..|++|+.++|++.
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~-----~~G~~V~~~~r~~~ 35 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLA-----LKGQSVLAWDIDAQ 35 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred CCEEEEECc-cHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 378999997 999999999999 79999999999743
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.84 E-value=0.0032 Score=44.48 Aligned_cols=37 Identities=19% Similarity=0.259 Sum_probs=33.1
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
+.+|||+||+|-+|+..++-+. ..|.+|++.++++..
T Consensus 32 g~~VLI~gaaGGVG~~aiQlak-----~~Ga~Viat~~s~~k 68 (176)
T d1xa0a2 32 RGPVLVTGATGGVGSLAVSMLA-----KRGYTVEASTGKAAE 68 (176)
T ss_dssp GCCEEESSTTSHHHHHHHHHHH-----HTTCCEEEEESCTTC
T ss_pred CCEEEEEeccchHHHHHHHHHH-----HcCCceEEecCchHH
Confidence 5689999999999999999988 699999999988664
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=95.82 E-value=0.0042 Score=43.64 Aligned_cols=37 Identities=24% Similarity=0.229 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+.+|||+||+|-+|..+++... ..|.+|++++|++.
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak-----~~Ga~vi~~~~~~~ 65 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAK-----LKGCKVVGAAGSDE 65 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESSHH
T ss_pred CCCEEEEEeCCCchhHHHHHHHH-----ccCCEEEEeCCCHH
Confidence 45799999999999999999888 79999999998754
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=95.71 E-value=0.0047 Score=43.06 Aligned_cols=38 Identities=24% Similarity=0.379 Sum_probs=33.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+.+|||+||+|-+|...++.+. ..|.+|+++++++..
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak-----~~G~~vi~~~~~~~~ 64 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVAR-----AMGLRVLAAASRPEK 64 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHH-----HTTCEEEEEESSGGG
T ss_pred CCCEEEEEeccccchhhhhhhhc-----ccccccccccccccc
Confidence 45789999999999999999888 689999999987543
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=95.57 E-value=0.0024 Score=43.84 Aligned_cols=69 Identities=22% Similarity=0.180 Sum_probs=46.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCC------------CCC--------------CCcc--
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG------------WFP--------------TALV-- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~------------~~~--------------~~~v-- 58 (176)
++||.|.|+ |.+|+.++..|+ ..| .++..+++..... ... .+.+
T Consensus 5 ~~KI~IIGa-G~VG~~~A~~l~-----~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~~~adivvi 78 (146)
T d1ez4a1 5 HQKVVLVGD-GAVGSSYAFAMA-----QQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVI 78 (146)
T ss_dssp BCEEEEECC-SHHHHHHHHHHH-----HHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHHhccccEEEE
Confidence 568999995 999999999998 455 5899998764210 000 0111
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|+...+.+++.+.+.
T Consensus 79 tag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~ 111 (146)
T d1ez4a1 79 TAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS 111 (146)
T ss_dssp CCCC----------CHHHHHHHHHHHHHHHHHT
T ss_pred ecccccCCCCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 1123456788999999999999988
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=95.57 E-value=0.0045 Score=43.69 Aligned_cols=36 Identities=17% Similarity=0.262 Sum_probs=32.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++||+||+|-+|+..++... ..|++|++++|++..
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk-----~~Ga~Via~~~~~~k 68 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLH-----KLGYQVVAVSGREST 68 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-----HTTCCEEEEESCGGG
T ss_pred CcEEEEEccccchHHHHHHHH-----HcCCCeEEEecchhH
Confidence 489999999999999999888 799999999998654
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.50 E-value=0.016 Score=40.14 Aligned_cols=40 Identities=15% Similarity=0.160 Sum_probs=31.2
Q ss_pred CcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecC
Q 030483 2 EKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARR 47 (176)
Q Consensus 2 ~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~ 47 (176)
.++..++..||.|+|+ |.+|++++..|+ ..|. ++..+++.
T Consensus 12 ~~~~~~~~~KI~IIGa-G~VG~~~A~~l~-----~~~l~~elvL~D~~ 53 (159)
T d2ldxa1 12 VPEDKLSRCKITVVGV-GDVGMACAISIL-----LKGLADELALVDAD 53 (159)
T ss_dssp SSCCCCCCCEEEEECC-SHHHHHHHHHHH-----TTTSCSEEEEECSC
T ss_pred cccccCCCCeEEEECC-CHHHHHHHHHHH-----hcCCCCEEEEEeCC
Confidence 4556666678999996 999999999999 4554 68777765
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.45 E-value=0.0084 Score=41.19 Aligned_cols=20 Identities=25% Similarity=0.541 Sum_probs=19.0
Q ss_pred eEEEEcCChHHHHHHHHHhh
Q 030483 11 VALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~ 30 (176)
+|.|.||||++|..|++.|.
T Consensus 3 kVaIvGATGyvG~eLirlL~ 22 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLE 22 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHH
Confidence 68999999999999999888
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.45 E-value=0.0035 Score=43.22 Aligned_cols=21 Identities=24% Similarity=0.297 Sum_probs=19.8
Q ss_pred CeEEEEcCChHHHHHHHHHhh
Q 030483 10 SVALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~ 30 (176)
+||.|+||+|.+|++++..|+
T Consensus 4 ~KV~IiGA~G~VG~~la~~l~ 24 (154)
T d5mdha1 4 IRVLVTGAAGQIAYSLLYSIG 24 (154)
T ss_dssp EEEEESSTTSHHHHTTHHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHH
Confidence 489999999999999999998
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=95.43 E-value=0.013 Score=39.56 Aligned_cols=68 Identities=19% Similarity=0.160 Sum_probs=48.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCCC--------------CC-------C-------Ccc-
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW--------------FP-------T-------ALV- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~~--------------~~-------~-------~~v- 58 (176)
|||.|+|+ |.+|++++..|+ ..+ .++..+++.+.... .. + +.+
T Consensus 1 mKI~IIGa-G~VG~~la~~l~-----~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~dadvvv 74 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLA-----EKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVI 74 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHH-----hCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhcCCeEEE
Confidence 47999996 999999999998 454 47888887654310 00 0 011
Q ss_pred ---------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ---------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ---------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|......+++.+.+.
T Consensus 75 itag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~ 108 (142)
T d1guza1 75 ITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH 108 (142)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCchHHHHHHHHHHHHHHHHHhhcc
Confidence 2244567889999999999999988
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=95.42 E-value=0.0071 Score=37.85 Aligned_cols=37 Identities=24% Similarity=0.322 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+|+|+|.|. |-.|..+++.|. ..|++|++.+.+..+
T Consensus 4 ~~K~v~ViGl-G~sG~s~a~~L~-----~~g~~v~~~D~~~~~ 40 (93)
T d2jfga1 4 QGKNVVIIGL-GLTGLSCVDFFL-----ARGVTPRVMDTRMTP 40 (93)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHH-----HTTCCCEEEESSSSC
T ss_pred CCCEEEEEeE-CHHHHHHHHHHH-----HCCCEEEEeeCCcCc
Confidence 4688999997 778999999999 799999999986554
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=95.41 E-value=0.0099 Score=40.43 Aligned_cols=68 Identities=12% Similarity=0.080 Sum_probs=48.0
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCC--C------------CC-C-------------CCcc--
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPP--G------------WF-P-------------TALV-- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~--~------------~~-~-------------~~~v-- 58 (176)
||.|+||+|.+|++++..|+ .++. ++..++..... . .. . .+.+
T Consensus 2 KV~IiGaaG~VG~~~A~~l~-----~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~~~~aDiVvi 76 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIA-----LRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVI 76 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----HTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEE
T ss_pred eEEEECCCCcHHHHHHHHHH-----hCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHHhhhcCEEEE
Confidence 78999999999999999998 4554 67777742110 0 00 0 0111
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|....+.+.+.+.+.
T Consensus 77 taG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~ 109 (142)
T d1o6za1 77 TAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH 109 (142)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ecccccccCCchhhHHHHHHHHHHHHHHHHHhc
Confidence 2245678899999999999999988
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=95.39 E-value=0.0083 Score=41.36 Aligned_cols=34 Identities=38% Similarity=0.649 Sum_probs=28.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~ 49 (176)
++|+|.| .|.+|..|++.|. ..|+ +|++.+|++.
T Consensus 2 k~I~IIG-~G~mG~sla~~L~-----~~g~~~~I~~~D~~~~ 37 (171)
T d2g5ca2 2 QNVLIVG-VGFMGGSFAKSLR-----RSGFKGKIYGYDINPE 37 (171)
T ss_dssp CEEEEES-CSHHHHHHHHHHH-----HTTCCSEEEEECSCHH
T ss_pred CEEEEEc-cCHHHHHHHHHHH-----hcCCCeEEEEEECChH
Confidence 4799997 6999999999999 5776 6888888753
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=95.38 E-value=0.0059 Score=42.50 Aligned_cols=38 Identities=21% Similarity=0.185 Sum_probs=33.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+.+|||+||+|-+|..+++.+. ..|.+|+++++++.+
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak-----~~Ga~Vi~~~~s~~k 65 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAK-----ALGAKLIGTVGTAQK 65 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHH-----HHTCEEEEEESSHHH
T ss_pred CCCEEEEEccccccchHHHHHHH-----HhCCeEeecccchHH
Confidence 46799999999999999999888 689999999988653
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=95.37 E-value=0.01 Score=42.66 Aligned_cols=35 Identities=31% Similarity=0.437 Sum_probs=31.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+++|+|.| .|..|...+.+|. ++|++|+.+.|...
T Consensus 6 ~~kVvVIG-aGiaGl~~A~~L~-----~~G~~V~vier~~~ 40 (268)
T d1c0pa1 6 QKRVVVLG-SGVIGLSSALILA-----RKGYSVHILARDLP 40 (268)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESSCT
T ss_pred CCcEEEEC-ccHHHHHHHHHHH-----HCCCCEEEEeCCCC
Confidence 46899999 6999999999999 79999999999754
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.37 E-value=0.0088 Score=40.72 Aligned_cols=35 Identities=20% Similarity=0.153 Sum_probs=25.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhC-CCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKN-PTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~-~~~~~~g~~V~~l~R~ 47 (176)
++|.|.||||++|..|++.|.+ + ....++..++.+
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~---hP~~~l~~~~s~ 38 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERD---FPLHRLHLLASA 38 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT---CCCSCEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcC---CCceEEEEEeec
Confidence 5899999999999999999962 0 123456666543
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=95.30 E-value=0.012 Score=38.75 Aligned_cols=36 Identities=31% Similarity=0.405 Sum_probs=31.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++|.| +||+|..++..|. +.|.+|+.+.|++..
T Consensus 30 ~~~vvIIG-gG~iG~E~A~~l~-----~~g~~Vtli~~~~~~ 65 (121)
T d1d7ya2 30 QSRLLIVG-GGVIGLELAATAR-----TAGVHVSLVETQPRL 65 (121)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESSSST
T ss_pred CCeEEEEC-cchhHHHHHHHhh-----cccceEEEEeecccc
Confidence 47888887 6999999999999 799999999997654
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.25 E-value=0.021 Score=38.03 Aligned_cols=61 Identities=11% Similarity=0.034 Sum_probs=38.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEE-EecCCCCCCCCCCcc--cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRPPPGWFPTALV--QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~~~~~~~~~~v--~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
|||.|.|++|-.|+.|.+.+. ++++++.+ ++++........+.+ ...|+.. ...++.|.+.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~-----~~~~~l~~~id~~~~~~~~~~DVvIDFS~p~~~--------~~~l~~~~~~ 64 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFS-----EKGHELVLKVDVNGVEELDSPDVVIDFSSPEAL--------PKTVDLCKKY 64 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEEETTEEEECSCCSEEEECSCGGGH--------HHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHh-----cCCCeEEEEECCCcHHHhccCCEEEEecCHHHH--------HHHHHHHHhc
Confidence 579999999999999998887 68888654 454432222222222 4444432 3566677776
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.10 E-value=0.0074 Score=42.07 Aligned_cols=37 Identities=24% Similarity=0.262 Sum_probs=32.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+.+|||+||+|-+|..+++.+. ..|.+|+++++++.
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~-----~~g~~vi~~~~~~~ 61 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAK-----MIGARIYTTAGSDA 61 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HHTCEEEEEESSHH
T ss_pred CCCEEEEECCCCCcccccchhhc-----cccccceeeecccc
Confidence 45799999999999999999888 68999999988653
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.01 E-value=0.011 Score=38.87 Aligned_cols=37 Identities=27% Similarity=0.296 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
..++++|.| .||+|..++..|. ..|.+|+.+.|.+..
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~-----~~g~~Vtlie~~~~~ 65 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFA-----KAGKKVTVIDILDRP 65 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESSSST
T ss_pred CCCEEEEEC-ChHHHHHHHHHhh-----ccceEEEEEEecCcc
Confidence 356888887 6999999999999 799999999887543
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.00 E-value=0.0087 Score=45.99 Aligned_cols=33 Identities=21% Similarity=0.216 Sum_probs=28.2
Q ss_pred CCeEEEEc--CChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 9 KSVALIIG--VTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 9 ~~~vLVtG--atGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
.|.+|||| ++.-||++++++|. +.|.+|....|
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la-----~~GA~V~i~~~ 36 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELS-----KRNVKIIFGIW 36 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHH-----HTTCEEEEEEC
T ss_pred CcEEEEeCCCCCChHHHHHHHHHH-----HcCCEEEEEeC
Confidence 47899999 55679999999999 79999987654
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=94.93 E-value=0.02 Score=37.28 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=30.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++|.| .|++|-.++..|. ..|.+|+.+.|.+.
T Consensus 22 p~~v~IiG-gG~iG~E~A~~l~-----~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVG-SGYIAVELINVIK-----RLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEECSSSS
T ss_pred CCEEEEEC-CchHHHHHHHHHH-----hccccceeeehhcc
Confidence 46898888 5999999999999 79999999998764
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=94.82 E-value=0.01 Score=42.02 Aligned_cols=34 Identities=18% Similarity=0.139 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.|+ |.+|+.++..++ ..|++|+.+++++.
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a-----~~G~~V~l~D~~~~ 38 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSA-----SKGTPILMKDINEH 38 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHH-----HTTCCEEEECSSHH
T ss_pred CEEEEECc-CHHHHHHHHHHH-----hCCCeEEEEECCHH
Confidence 57999997 999999999999 69999999998753
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.81 E-value=0.021 Score=36.91 Aligned_cols=36 Identities=22% Similarity=0.159 Sum_probs=31.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++|.| .|++|..++..|. ..|.+|+.+.|.+.-
T Consensus 22 p~~v~IiG-gG~ig~E~A~~l~-----~~G~~Vtlve~~~~i 57 (117)
T d1ebda2 22 PKSLVVIG-GGYIGIELGTAYA-----NFGTKVTILEGAGEI 57 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESSSSS
T ss_pred CCeEEEEC-CCccceeeeeeec-----ccccEEEEEEeccee
Confidence 36899988 6999999999999 799999999987653
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.72 E-value=0.019 Score=37.66 Aligned_cols=36 Identities=28% Similarity=0.265 Sum_probs=31.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++|.| +|+||..++..|. ..|.+|+.+.|++..
T Consensus 23 p~~~vIiG-~G~ig~E~A~~l~-----~lG~~Vtii~~~~~~ 58 (122)
T d1v59a2 23 PKRLTIIG-GGIIGLEMGSVYS-----RLGSKVTVVEFQPQI 58 (122)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSSSS
T ss_pred CCeEEEEC-CCchHHHHHHHHH-----hhCcceeEEEecccc
Confidence 47899998 6999999999999 799999999987643
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.69 E-value=0.017 Score=39.14 Aligned_cols=35 Identities=23% Similarity=0.149 Sum_probs=30.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
..+|++||.|| |.+|..-++.|+ +.|.+|+.++..
T Consensus 11 l~gkrvLViGg-G~va~~ka~~Ll-----~~GA~VtVvap~ 45 (150)
T d1kyqa1 11 LKDKRILLIGG-GEVGLTRLYKLM-----PTGCKLTLVSPD 45 (150)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHG-----GGTCEEEEEEEE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEeCC
Confidence 45789999998 889999999999 789999988654
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=94.66 E-value=0.02 Score=37.09 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=31.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++|.| .|++|..++..|. +.|.+|+.+.|.+..
T Consensus 21 p~~vvIiG-gG~ig~E~A~~l~-----~~G~~Vtlve~~~~~ 56 (116)
T d1gesa2 21 PERVAVVG-AGYIGVELGGVIN-----GLGAKTHLFEMFDAP 56 (116)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSSSS
T ss_pred CCEEEEEC-CChhhHHHHHHhh-----ccccEEEEEeecchh
Confidence 36788888 6999999999999 799999999997643
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=94.63 E-value=0.018 Score=40.80 Aligned_cols=33 Identities=24% Similarity=0.228 Sum_probs=28.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+||.|.| +|--|++++..|. +.|++|+.++|++
T Consensus 8 ~KI~ViG-aG~wGtAlA~~La-----~~g~~V~l~~r~~ 40 (189)
T d1n1ea2 8 NKAVVFG-SGAFGTALAMVLS-----KKCREVCVWHMNE 40 (189)
T ss_dssp EEEEEEC-CSHHHHHHHHHHH-----TTEEEEEEECSCH
T ss_pred ceEEEEC-CCHHHHHHHHHHH-----HcCCeEEEEEecH
Confidence 5799999 5778999999999 7999999999864
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=94.59 E-value=0.02 Score=38.10 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=31.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++|.| +||+|-.++..|. ..|.+|+.+.|.+..
T Consensus 35 ~k~v~VIG-gG~iG~E~A~~l~-----~~g~~Vtvie~~~~~ 70 (133)
T d1q1ra2 35 DNRLVVIG-GGYIGLEVAATAI-----KANMHVTLLDTAARV 70 (133)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSSST
T ss_pred CCEEEEEC-CchHHHHHHHHHH-----hhCcceeeeeecccc
Confidence 47899998 6999999999999 799999999987654
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.48 E-value=0.019 Score=39.51 Aligned_cols=37 Identities=22% Similarity=0.151 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+.+++|+|+ |-+|...++.+. ..|.+|+++++++.+
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak-----~~G~~vi~~~~~~~k 63 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISK-----AMGAETYVISRSSRK 63 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HHTCEEEEEESSSTT
T ss_pred CCCEEEEECC-CCcchhHHHHhh-----hccccccccccchhH
Confidence 4678999986 889999888877 689999999998654
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=94.42 E-value=0.021 Score=37.36 Aligned_cols=34 Identities=35% Similarity=0.423 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++++|.| .|++|-.++..|. +.|.+|+.+.|.+.
T Consensus 33 ~~vvIiG-gG~iG~E~A~~l~-----~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 33 GEAIIIG-GGFIGLELAGNLA-----EAGYHVKLIHRGAM 66 (122)
T ss_dssp SEEEEEE-CSHHHHHHHHHHH-----HTTCEEEEECSSSC
T ss_pred CcEEEEC-CcHHHHHHHHHhh-----cccceEEEEecccc
Confidence 6788877 6999999999999 79999999988653
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.37 E-value=0.022 Score=36.77 Aligned_cols=36 Identities=22% Similarity=0.217 Sum_probs=30.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++|.| .|++|-.++..|. +.|.+|+.+.|.+.-
T Consensus 21 p~~vvIiG-gG~~G~E~A~~l~-----~~g~~Vtlve~~~~i 56 (115)
T d1lvla2 21 PQHLVVVG-GGYIGLELGIAYR-----KLGAQVSVVEARERI 56 (115)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHH-----HHTCEEEEECSSSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHHh-----hcccceEEEeeeccc
Confidence 46888887 6999999999999 799999999887643
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=94.37 E-value=0.022 Score=38.64 Aligned_cols=68 Identities=21% Similarity=0.231 Sum_probs=48.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCC------------CCC---------------CCcc--
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPG------------WFP---------------TALV-- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~------------~~~---------------~~~v-- 58 (176)
.||-|+|+ |.+|++++..|+ .++. |+..+++.+... ... .+.+
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~-----~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~daDvVVi 75 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAA-----QRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVI 75 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhhCCcEEEE
Confidence 37889996 999999999988 4554 788888654210 000 0111
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|....+.+.+.+.+.
T Consensus 76 taG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~ 108 (143)
T d1llda1 76 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKV 108 (143)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecccccCCCCchhhhhhhhHHHHHHHHHHHHhh
Confidence 2245678899999999999999988
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=94.36 E-value=0.03 Score=42.58 Aligned_cols=35 Identities=26% Similarity=0.341 Sum_probs=30.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.|+|+|.| +|+.|...+..|. +.|++|..+.+++.
T Consensus 2 ~KKI~IIG-aG~sGL~aA~~L~-----k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVG-AGFSGAVIGRQLA-----EKGHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEEESSSS
T ss_pred CCEEEEEC-CcHHHHHHHHHHH-----hCCCCEEEEECCCC
Confidence 47899998 6999999999999 68999999988764
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.34 E-value=0.018 Score=39.53 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=29.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.| .|-.|+.++++|+ +.||+|++.+|++.
T Consensus 2 ~kIg~IG-lG~MG~~iA~~L~-----~~g~~v~~~d~~~~ 35 (162)
T d3cuma2 2 KQIAFIG-LGHMGAPMATNLL-----KAGYLLNVFDLVQS 35 (162)
T ss_dssp CEEEEEC-CSTTHHHHHHHHH-----HTTCEEEEECSSHH
T ss_pred CEEEEEE-EHHHHHHHHHHHH-----HCCCeEEEEECchh
Confidence 4688886 7999999999999 79999999998754
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.33 E-value=0.026 Score=37.04 Aligned_cols=35 Identities=20% Similarity=0.202 Sum_probs=30.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
++++|.| .|+||-.++..|. ..|.+|+.+.|++.-
T Consensus 23 k~vvIvG-gG~iG~E~A~~l~-----~~G~~Vtlv~~~~~~ 57 (125)
T d3grsa2 23 GRSVIVG-AGYIAVEMAGILS-----ALGSKTSLMIRHDKV 57 (125)
T ss_dssp SEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSSSS
T ss_pred CEEEEEc-CCccHHHHHHHHh-----cCCcEEEEEeecccc
Confidence 6899998 5899999999999 799999999997643
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=94.33 E-value=0.021 Score=39.18 Aligned_cols=69 Identities=13% Similarity=-0.024 Sum_probs=47.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCCC-------------CC-C---------------CCcc
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPG-------------WF-P---------------TALV 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~-------------~~-~---------------~~~v 58 (176)
++||-|.|+ |.+|+.++..|. ..+. ++..++.++... .. . .+.+
T Consensus 7 ~~KI~IIGa-G~VG~~lA~~l~-----~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiV 80 (154)
T d1pzga1 7 RKKVAMIGS-GMIGGTMGYLCA-----LRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCV 80 (154)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEE
T ss_pred CCcEEEECC-CHHHHHHHHHHH-----hCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeE
Confidence 468999997 999999998777 4554 788887654321 00 0 0111
Q ss_pred ---------c------CcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ---------Q------ESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ---------~------~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
. .+..+.+..|...++.+++.+.+.
T Consensus 81 vitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~ 120 (154)
T d1pzga1 81 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY 120 (154)
T ss_dssp EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred EEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhc
Confidence 1 133567889999999999999998
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=94.32 E-value=0.016 Score=39.19 Aligned_cols=68 Identities=18% Similarity=0.047 Sum_probs=44.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCCCCCC-------------C-C-------C-------Ccc--
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW-------------F-P-------T-------ALV-- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~~-------------~-~-------~-------~~v-- 58 (176)
+||-|+|+ |.+|++++..|. .++ .++..++....... . . + +.+
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~-----~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~~advvvi 75 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLA-----AKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVV 75 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEE
T ss_pred CeEEEECC-CHHHHHHHHHHH-----hCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhcCCCEEEE
Confidence 68999996 999999999888 344 37888886553210 0 0 0 011
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|....+.+++.+.+.
T Consensus 76 tag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~ 108 (142)
T d1uxja1 76 TSGAPRKPGMSREDLIKVNADITRACISQAAPL 108 (142)
T ss_dssp CCSCC---------CHHHHHHHHHHHHHHHGGG
T ss_pred eeeccCCcCcchhHHHhHHHHHHHHHHHHHhcc
Confidence 1123456788999999999999998
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=94.32 E-value=0.027 Score=40.66 Aligned_cols=36 Identities=28% Similarity=0.335 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+.+||+|.| .|..|..++..|. +.|++|+.+.|++.
T Consensus 3 ~~~kV~IiG-aG~aGl~~A~~L~-----~~G~~v~v~Er~~~ 38 (265)
T d2voua1 3 TTDRIAVVG-GSISGLTAALMLR-----DAGVDVDVYERSPQ 38 (265)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSSS
T ss_pred CCCcEEEEC-cCHHHHHHHHHHH-----HCCCCEEEEeCCCC
Confidence 356899999 5999999999999 68999999998754
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=94.24 E-value=0.037 Score=38.18 Aligned_cols=37 Identities=19% Similarity=0.226 Sum_probs=29.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++.|+.|.| .|.+|+.+++.|.+ ..+++++++..+.
T Consensus 1 M~kirvgiiG-~G~ig~~~~~~l~~----~~~~elvav~~~~ 37 (170)
T d1f06a1 1 MTNIRVAIVG-YGNLGRSVEKLIAK----QPDMDLVGIFSRR 37 (170)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTT----CSSEEEEEEEESS
T ss_pred CCcceEEEEC-ChHHHHHHHHHHHh----CCCcEEEEEEecc
Confidence 4556899998 69999999999995 5789988765443
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.23 E-value=0.018 Score=41.02 Aligned_cols=32 Identities=25% Similarity=0.252 Sum_probs=28.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
|+|.|.| .|++|..++..|. +.|++|++++.+
T Consensus 1 MkI~ViG-lG~vGl~~a~~la-----~~g~~V~g~D~n 32 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLS-----ARGHEVIGVDVS 32 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHH-----HTTCEEEEECSC
T ss_pred CEEEEEC-CCHhHHHHHHHHH-----hCCCcEEEEeCC
Confidence 5789995 8999999999999 799999999865
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=94.22 E-value=0.032 Score=36.25 Aligned_cols=36 Identities=19% Similarity=0.111 Sum_probs=31.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++|.| +|+||-.++..|. ..|.+|+.+.|++..
T Consensus 22 p~~i~IiG-~G~ig~E~A~~l~-----~~G~~Vtiv~~~~~l 57 (119)
T d3lada2 22 PGKLGVIG-AGVIGLELGSVWA-----RLGAEVTVLEAMDKF 57 (119)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESSSSS
T ss_pred CCeEEEEC-CChHHHHHHHHHH-----HcCCceEEEEeeccc
Confidence 47899998 6999999999999 799999999987643
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=94.22 E-value=0.015 Score=39.91 Aligned_cols=34 Identities=24% Similarity=0.360 Sum_probs=30.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|||-|.| .|.+|+.+++.|+ +.||+|++.+|++.
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~-----~~G~~V~~~d~~~~ 34 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLL-----KAGYSLVVSDRNPE 34 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred CEEEEEe-hhHHHHHHHHHHH-----HCCCeEEEEeCCcc
Confidence 4688887 6999999999999 79999999998754
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=94.21 E-value=0.023 Score=41.01 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=29.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|+|.|| |..|-..+.+|. +.|++|+.+.+++
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~-----~~G~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLR-----SRGTDAVLLESSA 33 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHH-----TTTCCEEEECSSS
T ss_pred CeEEEECC-CHHHHHHHHHHH-----hCCCCEEEEecCC
Confidence 47999996 999999999999 7999999998764
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=94.16 E-value=0.032 Score=40.14 Aligned_cols=34 Identities=29% Similarity=0.273 Sum_probs=30.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.|||+|.| +|.-|-..+.+|. +.|++|+.+.+++
T Consensus 1 ~KkV~IIG-aG~aGL~aA~~La-----~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIG-AGVSGLAAAYKLK-----IHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-----TTSCEEEEECSSS
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-----hCCCCEEEEeCCC
Confidence 47899998 6999999999999 7999999998764
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=94.08 E-value=0.027 Score=38.93 Aligned_cols=70 Identities=19% Similarity=0.234 Sum_probs=49.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCC-------------CCC--------------CCcc
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPG-------------WFP--------------TALV 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~-------------~~~--------------~~~v 58 (176)
+++||-|.|+ |.+|+.++..|. ..|. ++..+++..... ... .+.+
T Consensus 19 ~~~KV~IIGa-G~VG~~~A~~l~-----~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~adiV 92 (160)
T d1i0za1 19 PNNKITVVGV-GQVGMACAISIL-----GKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIV 92 (160)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHH-----HTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTCSEE
T ss_pred CCCeEEEECC-CHHHHHHHHHHH-----hcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccccEE
Confidence 4679999996 999999999999 4665 688888753210 000 0111
Q ss_pred ----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|+...+.+++.+.+.
T Consensus 93 VitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~ 127 (160)
T d1i0za1 93 VVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY 127 (160)
T ss_dssp EECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCccccCcchHHHHHHHHHHHHHHHHHHHhc
Confidence 1234567889999999999999998
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=94.01 E-value=0.027 Score=38.14 Aligned_cols=35 Identities=23% Similarity=0.210 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
|||.|.| .|.+|+.+++.|+ +.|++|+..+|++..
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~-----~~g~~v~~~~~~~~~ 35 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLR-----SRGVEVVTSLEGRSP 35 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHH-----HTTCEEEECCTTCCH
T ss_pred CEEEEEc-HHHHHHHHHHHHH-----HCCCeEEEEcCchhH
Confidence 4788886 6999999999999 799999988876543
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=93.96 E-value=0.021 Score=39.65 Aligned_cols=34 Identities=24% Similarity=0.245 Sum_probs=29.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|-|.| .|..|..+++.|+ +.||+|++.+|.+.
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~-----~~G~~V~~~dr~~~ 35 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIA-----EKGFKVAVFNRTYS 35 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSHH
T ss_pred CEEEEEe-ehHHHHHHHHHHH-----HCCCeEEEEECCHH
Confidence 4688887 8999999999999 79999999998653
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=93.84 E-value=0.037 Score=40.27 Aligned_cols=38 Identities=16% Similarity=0.046 Sum_probs=32.1
Q ss_pred CCCCeEEEEcC----------------ChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..+++||||+| ||..|.+|+++|. ..|++|+.+.-...
T Consensus 4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~-----~~Ga~V~li~g~~~ 57 (223)
T d1u7za_ 4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAA-----RRGANVTLVSGPVS 57 (223)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHH-----HTTCEEEEEECSCC
T ss_pred cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHH-----HcCCchhhhhcccc
Confidence 45788999887 8999999999999 79999998876443
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=93.76 E-value=0.035 Score=38.01 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=28.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
|+|.|.|+||-||...++-+.++ .+.++|.+++=.
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~---~d~f~v~~Lsa~ 36 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHN---PEHFRVVALVAG 36 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHC---TTTEEEEEEEES
T ss_pred CeEEEEcCCcHHHHHHHHHHHhC---CCCcEEEEEEec
Confidence 57999999999999998877641 467999998743
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=93.68 E-value=0.032 Score=40.71 Aligned_cols=32 Identities=25% Similarity=0.192 Sum_probs=28.7
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|.| +|.+|..++.+|. ++|++|+.+.|...
T Consensus 7 vvIIG-aGi~Gls~A~~La-----~~G~~V~vlE~~~~ 38 (276)
T d1ryia1 7 AVVIG-GGIIGSAIAYYLA-----KENKNTALFESGTM 38 (276)
T ss_dssp EEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSST
T ss_pred EEEEC-cCHHHHHHHHHHH-----HCCCcEEEEeCCCC
Confidence 88888 6999999999999 68999999998753
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=93.56 E-value=0.026 Score=38.63 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=28.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
|+|.|.|+||-||...++-+.++ .+.|+|.+++=.
T Consensus 3 K~I~IlGsTGSIG~~tL~Vi~~~---~d~f~v~~lsa~ 37 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTLDLIERN---LDRYQVIALTAN 37 (150)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT---GGGEEEEEEEES
T ss_pred cEEEEECCCcHHHHHHHHHHHcC---CCCcEEEEEEeC
Confidence 78999999999999999888631 357899998643
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=93.30 E-value=0.07 Score=37.35 Aligned_cols=37 Identities=19% Similarity=0.179 Sum_probs=32.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+|+|+|.| +|..|-..+..|. .+||+|+.+.+.+..
T Consensus 42 ~~k~V~IIG-aGPAGL~AA~~la-----~~G~~Vtl~E~~~~~ 78 (179)
T d1ps9a3 42 QKKNLAVVG-AGPAGLAFAINAA-----ARGHQVTLFDAHSEI 78 (179)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEEESSSSS
T ss_pred CCcEEEEEC-ccHHHHHHHHHHH-----hhccceEEEeccCcc
Confidence 468999999 6999999999999 799999999987644
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.27 E-value=0.044 Score=35.82 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=28.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++++|.| .|+||-.++..|. +.|.+|+.+.|+
T Consensus 21 ~~vvIIG-gG~iG~E~A~~l~-----~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVG-ASYVALECAGFLA-----GIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEEC-CSHHHHHHHHHHH-----HTTCCEEEEESS
T ss_pred CeEEEEC-CCccHHHHHHHHh-----hcCCeEEEEEec
Confidence 5788888 6999999999999 799999999875
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=93.17 E-value=0.062 Score=36.34 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=28.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|||.+.| +|-+|++|++.|+ ..|++|+...|++
T Consensus 1 MkIg~IG-~G~mG~al~~~l~-----~~~~~i~v~~r~~ 33 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLK-----QTPHELIISGSSL 33 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHT-----TSSCEEEEECSSH
T ss_pred CEEEEEe-ccHHHHHHHHHHH-----hCCCeEEEEcChH
Confidence 4688886 8999999999999 6899999888864
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.15 E-value=0.032 Score=37.68 Aligned_cols=68 Identities=12% Similarity=0.004 Sum_probs=47.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCC-------------CCC---------------CCcc-
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG-------------WFP---------------TALV- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~-------------~~~---------------~~~v- 58 (176)
|||-|+|+ |.+|++++..|+ .++ -++..+++.+... ... .+.+
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~-----~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~~~~adiVv 74 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCL-----LNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIV 74 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHH-----hcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHHhccccEEE
Confidence 58899996 999999999888 344 3688887654210 000 0111
Q ss_pred ---------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ---------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ---------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|....+.+.+.+.+.
T Consensus 75 itag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~ 108 (142)
T d1ojua1 75 VTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN 108 (142)
T ss_dssp ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EeccccCCCCCchHHHHHHhhHHHHHHHHHHHhh
Confidence 2244667889999999999999988
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.14 E-value=0.036 Score=38.25 Aligned_cols=36 Identities=14% Similarity=0.153 Sum_probs=30.9
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~ 50 (176)
++||+|.| +|..|-..+..|. +.|+ +|+.+.|++..
T Consensus 4 ~~kVaIIG-aGpaGl~aA~~l~-----~~G~~~V~v~E~~~~~ 40 (196)
T d1gtea4 4 SAKIALLG-AGPASISCASFLA-----RLGYSDITIFEKQEYV 40 (196)
T ss_dssp GCCEEEEC-CSHHHHHHHHHHH-----HTTCCCEEEEESSSSC
T ss_pred CCEEEEEC-ChHHHHHHHHHHH-----HCCCCeEEEEEecCcc
Confidence 57899999 6999999999999 6898 59999987643
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=93.11 E-value=0.045 Score=40.21 Aligned_cols=35 Identities=29% Similarity=0.387 Sum_probs=30.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..|+|+|.| +|..|-..+.+|. ..|++|+.+.+++
T Consensus 29 ~pkkV~IIG-aG~aGLsaA~~L~-----~~G~~V~vlE~~~ 63 (370)
T d2iida1 29 NPKHVVIVG-AGMAGLSAAYVLA-----GAGHQVTVLEASE 63 (370)
T ss_dssp SCCEEEEEC-CBHHHHHHHHHHH-----HHTCEEEEECSSS
T ss_pred CCCeEEEEC-CCHHHHHHHHHHH-----HCCCCEEEEeCCC
Confidence 357899999 6999999999999 6999999998764
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=93.10 E-value=0.069 Score=34.35 Aligned_cols=36 Identities=11% Similarity=0.188 Sum_probs=30.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++|.| +|+||..++..|. ..|.+|+.+.|++..
T Consensus 22 ~~~vvVvG-gG~ig~E~A~~l~-----~~g~~vt~i~~~~~~ 57 (121)
T d1mo9a2 22 GSTVVVVG-GSKTAVEYGCFFN-----ATGRRTVMLVRTEPL 57 (121)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSCTT
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-----hcchhheEeeccchh
Confidence 47888877 6999999999999 799999999987543
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.90 E-value=0.061 Score=36.57 Aligned_cols=37 Identities=16% Similarity=0.118 Sum_probs=30.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+.+|+|.|+ |-+|...++.+. ..|.+|+++++++.+
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak-----~~G~~Vi~~~~~~~~ 63 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYAR-----AMGLHVAAIDIDDAK 63 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCHHH
T ss_pred CCCEEEEeec-cccHHHHHHHHH-----HcCCccceecchhhH
Confidence 4678999886 889999888777 688999999987543
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=92.83 E-value=0.091 Score=33.57 Aligned_cols=36 Identities=19% Similarity=0.001 Sum_probs=30.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++|||.|+ |-+|..-++.|+ +.|.+|+.++....
T Consensus 11 ~~k~vlVvG~-G~va~~ka~~ll-----~~ga~v~v~~~~~~ 46 (113)
T d1pjqa1 11 RDRDCLIVGG-GDVAERKARLLL-----EAGARLTVNALTFI 46 (113)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHH-----HTTBEEEEEESSCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HCCCeEEEEeccCC
Confidence 5789999995 779999999999 78999998876543
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=92.82 E-value=0.099 Score=33.59 Aligned_cols=36 Identities=22% Similarity=0.126 Sum_probs=28.1
Q ss_pred CCeEEEEcCChHHHHHHHH---HhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAE---ALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~---~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++|.|| |++|-.++. .|. .++.+|+.+.|.+..
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~-----~~~~~Vtli~~~~~i 58 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYK-----PKDGQVTLCYRGEMI 58 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHC-----CTTCEEEEEESSSSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcc-----cCCcEEEEEeccchh
Confidence 368999996 999999885 455 577899999886543
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=92.82 E-value=0.062 Score=37.65 Aligned_cols=32 Identities=28% Similarity=0.241 Sum_probs=25.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|.|.| .|++|..++. ++ +.|++|++++-++
T Consensus 1 MkI~ViG-lG~vGl~~a~-~~-----a~g~~V~g~Din~ 32 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGV-LL-----SLQNEVTIVDILP 32 (196)
T ss_dssp CEEEEEC-CSHHHHHHHH-HH-----TTTSEEEEECSCH
T ss_pred CEEEEEC-CChhHHHHHH-HH-----HCCCcEEEEECCH
Confidence 5799996 8999999886 44 3699999998653
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=92.74 E-value=0.043 Score=36.88 Aligned_cols=68 Identities=18% Similarity=0.063 Sum_probs=47.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCC-------------CCC-------------CCcc---
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG-------------WFP-------------TALV--- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~-------------~~~-------------~~~v--- 58 (176)
+||-|.|+ |.+|++++..|+ ..+ -++..+++.+... ... .+.+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~-----~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~adivvit 74 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALL-----MKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVA 74 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEEC
T ss_pred CEEEEECc-CHHHHHHHHHHH-----hCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCCCEEEEe
Confidence 57889996 999999999887 344 4788887654220 000 0111
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|....+.+++.+.+.
T Consensus 75 ag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~ 106 (140)
T d1a5za1 75 AGVPQKPGETRLQLLGRNARVMKEIARNVSKY 106 (140)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCcchhhhhccccchHHHHHHHHHhc
Confidence 2234567888999999999999998
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=92.70 E-value=0.072 Score=36.84 Aligned_cols=37 Identities=22% Similarity=0.126 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~ 50 (176)
.+.+|||+|+ |-||...++.+. ..|. +|+++++++.+
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak-----~~Ga~~Vi~~~~~~~~ 65 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIAR-----SLGAENVIVIAGSPNR 65 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHH-----HTTBSEEEEEESCHHH
T ss_pred CCCEEEEECC-Cccchhheeccc-----cccccccccccccccc
Confidence 4679999997 889999999888 6887 79999887643
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=92.62 E-value=0.14 Score=33.81 Aligned_cols=80 Identities=16% Similarity=0.140 Sum_probs=47.9
Q ss_pred CCeEEEEcCC---hHHHHHHHHHhhCCCCCCCC-cEEEEEecCCCCCC-----CCCCcccCcHH-HHHHHHHHHHHHHHH
Q 030483 9 KSVALIIGVT---GISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW-----FPTALVQESEE-VNIFKNSTMLKNVLS 78 (176)
Q Consensus 9 ~~~vLVtGat---GfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~~-----~~~~~v~~~~~-~~~~~N~~~t~~ll~ 78 (176)
.++|.|.|+| +-.|..+.+.|. +.| ++|+.+..+..... .....+....+ ..+-+....+..+++
T Consensus 8 PksIAVVGaS~~~~~~g~~v~~~L~-----~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi~vp~~~~~~~~~ 82 (129)
T d2csua1 8 PKGIAVIGASNDPKKLGYEVFKNLK-----EYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVPKRFVKDTLI 82 (129)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHT-----TCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEECSCHHHHHHHHH
T ss_pred CCeEEEEccCCCCCCcHHHHHHHHH-----HcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEEecChHHhHHHHH
Confidence 4789999998 999999999998 444 68998876533211 01011111111 011222333456778
Q ss_pred HHHhcCCCCCCccEEEEecc
Q 030483 79 VLVSSNSGRSRLRHVALLTG 98 (176)
Q Consensus 79 a~~~~~~~~~~v~~vv~~Ss 98 (176)
.|.+. +++.+++.|+
T Consensus 83 ~~~~~-----g~~~~vi~s~ 97 (129)
T d2csua1 83 QCGEK-----GVKGVVIITA 97 (129)
T ss_dssp HHHHH-----TCCEEEECCC
T ss_pred HHHHc-----CCCEEEEecc
Confidence 88777 6777776654
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=92.59 E-value=0.056 Score=35.50 Aligned_cols=35 Identities=23% Similarity=0.212 Sum_probs=30.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++|.| .|+||..++..|. ..|.+|+.+.|++.
T Consensus 26 p~~vvIiG-gG~IG~E~A~~~~-----~~G~~Vtive~~~~ 60 (125)
T d1ojta2 26 PGKLLIIG-GGIIGLEMGTVYS-----TLGSRLDVVEMMDG 60 (125)
T ss_dssp CSEEEEES-CSHHHHHHHHHHH-----HHTCEEEEECSSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHhh-----cCCCEEEEEEeecc
Confidence 36889988 6999999999999 79999999988754
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=92.56 E-value=0.071 Score=36.68 Aligned_cols=35 Identities=23% Similarity=0.197 Sum_probs=29.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++|||.|+.| .+++++.+|. ..|.+|+.+.|+.
T Consensus 17 ~~k~vlIlGaGG-aarai~~al~-----~~g~~i~I~nRt~ 51 (170)
T d1nyta1 17 PGLRILLIGAGG-ASRGVLLPLL-----SLDCAVTITNRTV 51 (170)
T ss_dssp TTCEEEEECCSH-HHHHHHHHHH-----HTTCEEEEECSSH
T ss_pred CCCEEEEECCcH-HHHHHHHHhc-----ccceEEEeccchH
Confidence 568999999755 8999999999 6788888888864
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=92.46 E-value=0.052 Score=37.58 Aligned_cols=34 Identities=18% Similarity=0.239 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+|-|.| -|-.|+.+++.|+ +.||+|++++|++.
T Consensus 3 ~nIg~IG-lG~MG~~mA~~L~-----~~G~~V~v~dr~~~ 36 (176)
T d2pgda2 3 ADIALIG-LAVMGQNLILNMN-----DHGFVVCAFNRTVS 36 (176)
T ss_dssp BSEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSTH
T ss_pred CcEEEEe-EhHHHHHHHHHHH-----HCCCeEEEEcCCHH
Confidence 4688888 5999999999999 79999999999864
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=92.44 E-value=0.051 Score=36.67 Aligned_cols=35 Identities=20% Similarity=0.287 Sum_probs=28.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|.+.|+ |-+|+++++.|++ ..+++|++.+|++.
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~----~~~~~i~v~~r~~~ 35 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVK----QGGYRIYIANRGAE 35 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH----HCSCEEEEECSSHH
T ss_pred CEEEEEcC-cHHHHHHHHHHHH----CCCCcEEEEeCChh
Confidence 57888885 9999999999984 34489999998754
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.33 E-value=0.038 Score=40.69 Aligned_cols=36 Identities=33% Similarity=0.378 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+.+|+|.|| |..|..++..|. ..|++|..+.|++.
T Consensus 1 mk~~V~IvGa-Gp~Gl~~A~~L~-----~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 1 MKTQVAIIGA-GPSGLLLGQLLH-----KAGIDNVILERQTP 36 (292)
T ss_dssp CBCSEEEECC-SHHHHHHHHHHH-----HHTCCEEEECSSCH
T ss_pred CCCCEEEECc-CHHHHHHHHHHH-----HCCCCEEEEeCCCC
Confidence 4557999995 799999999999 79999999998753
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=92.23 E-value=0.089 Score=35.78 Aligned_cols=36 Identities=33% Similarity=0.302 Sum_probs=30.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+.+|+|+| +|-+|...++.+. ..|.+|+++++++.
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak-----~~Ga~vi~v~~~~~ 61 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAK-----AYGAFVVCTARSPR 61 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESCHH
T ss_pred CCCEEEEEc-ccccchhhHhhHh-----hhcccccccchHHH
Confidence 457899997 6889999998887 68899999998754
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=92.13 E-value=0.072 Score=36.38 Aligned_cols=37 Identities=14% Similarity=0.078 Sum_probs=30.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+.+|+|.|+ |-||...++.+. ..|.+++++++++.+
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak-----~~Ga~~i~~~~~~~~ 66 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAH-----AMGAHVVAFTTSEAK 66 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESSGGG
T ss_pred CCCEEEEecc-chHHHHHHHHhh-----cccccchhhccchhH
Confidence 4679999986 779999988887 689999888887654
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=92.12 E-value=0.056 Score=35.25 Aligned_cols=36 Identities=17% Similarity=0.138 Sum_probs=31.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++|.| .|+||-.++..|. ..|.+|+.+.|++..
T Consensus 25 p~~~viiG-~G~iglE~A~~~~-----~~G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 25 PKKLVVIG-AGYIGLEMGSVWG-----RIGSEVTVVEFASEI 60 (123)
T ss_dssp CSEEEESC-CSHHHHHHHHHHH-----HHTCEEEEECSSSSS
T ss_pred CCeEEEEc-cchHHHHHHHHHH-----hcCCeEEEEEEcccc
Confidence 46888888 6999999999999 799999999997654
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=92.03 E-value=0.067 Score=36.65 Aligned_cols=36 Identities=25% Similarity=0.277 Sum_probs=29.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
...+++||.|+ |-+|..+++.|. ..|. +++...|..
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~-----~~g~~~i~v~nRt~ 58 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLV-----DRGVRAVLVANRTY 58 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHH-----HHCCSEEEEECSSH
T ss_pred cccCeEEEECC-CHHHHHHHHHHH-----hcCCcEEEEEcCcH
Confidence 35689999997 999999999999 5777 577777763
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.93 E-value=0.063 Score=37.30 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=28.6
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|.| +|+.|...+.+|. ..|++|..+.+++.
T Consensus 8 viViG-aG~~Gl~~A~~La-----~~G~~V~vlE~~~~ 39 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLS-----VDGKKVLHIDKQDH 39 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSSS
T ss_pred EEEEC-cCHHHHHHHHHHH-----HCCCCEEEEcCCCC
Confidence 78888 7999999999999 69999999998753
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=91.71 E-value=0.13 Score=34.44 Aligned_cols=33 Identities=30% Similarity=0.589 Sum_probs=27.6
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
||+|.| .|++|-.++..|. ++++|+.+.|.+..
T Consensus 2 rVvIIG-gG~~G~e~A~~l~------~~~~Vtvv~~~~~~ 34 (167)
T d1xhca1 2 KVVIVG-NGPGGFELAKQLS------QTYEVTVIDKEPVP 34 (167)
T ss_dssp EEEEEC-CSHHHHHHHHHHT------TTSEEEEECSSSSC
T ss_pred eEEEEC-CcHHHHHHHHHHH------cCCCEEEEeccccc
Confidence 688888 5899999999997 46799999887654
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=91.69 E-value=0.084 Score=35.42 Aligned_cols=35 Identities=17% Similarity=0.198 Sum_probs=28.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~ 49 (176)
+|||+|.| .|++|-.++..|. +.+ .+|+.+.+++.
T Consensus 2 gkrivIvG-gG~~G~e~A~~l~-----~~~~~~~Vtlie~~~~ 38 (186)
T d1fcda1 2 GRKVVVVG-GGTGGATAAKYIK-----LADPSIEVTLIEPNTD 38 (186)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-----HHCTTSEEEEECSCSC
T ss_pred CCcEEEEC-ccHHHHHHHHHHH-----HcCCCCcEEEEECCCc
Confidence 68999999 5999999999998 444 57888887653
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=91.45 E-value=0.14 Score=36.56 Aligned_cols=37 Identities=30% Similarity=0.290 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
..++|+|.| +|+.|-..+..|. ..|++|+.+.+++..
T Consensus 48 ~~k~VvIIG-aGpAGl~aA~~l~-----~~G~~v~l~E~~~~~ 84 (233)
T d1djqa3 48 NKDSVLIVG-AGPSGSEAARVLM-----ESGYTVHLTDTAEKI 84 (233)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSSST
T ss_pred CCceEEEEc-ccHHHHHHHHHHH-----HhccceeeEeecccc
Confidence 458899999 6999999999999 799999999887643
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=91.38 E-value=0.23 Score=31.84 Aligned_cols=35 Identities=17% Similarity=0.222 Sum_probs=31.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..||.|.| +|.+|+-|+.+.. +-|++|+.++.++.
T Consensus 11 ~~kigIlG-gGQL~rMla~aA~-----~lG~~v~v~d~~~~ 45 (111)
T d1kjqa2 11 ATRVMLLG-SGELGKEVAIECQ-----RLGVEVIAVDRYAD 45 (111)
T ss_dssp CCEEEEES-CSHHHHHHHHHHH-----TTTCEEEEEESSTT
T ss_pred CCEEEEEe-CCHHHHHHHHHHH-----HCCCEEEEEcCCCC
Confidence 35799999 7999999999999 79999999998754
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=91.34 E-value=0.088 Score=35.36 Aligned_cols=36 Identities=22% Similarity=0.054 Sum_probs=29.5
Q ss_pred CCeEEEE-cCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALII-GVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVt-GatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++.++|. .+.||||..++..|. +.|.+|+.+.+.+.
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la-----~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLA-----TAGHEVTIVSGVHL 75 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHH-----HTTCEEEEEESSCT
T ss_pred CCceEEEecCCChHHHHHHHHHH-----HcCCeEEEEecCCc
Confidence 4556665 357999999999999 79999999998653
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=91.30 E-value=0.13 Score=31.04 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=29.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|.|.| +|.+|+-++.+-. .-|++|+.++..+.
T Consensus 2 k~vgIlG-~GQLgrMl~~Aa~-----~LG~~v~vldp~~~ 35 (78)
T d3etja2 2 KQVCVLG-NGQLGRMLRQAGE-----PLGIAVWPVGLDAE 35 (78)
T ss_dssp EEEEEEB-CSHHHHHHHHHHG-----GGTEEEEEECTTSC
T ss_pred CEEEEEc-CCHHHHHHHHHHH-----HcCCEEEEEcCCCC
Confidence 6889998 6999999999999 79999999987543
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=91.23 E-value=0.12 Score=35.93 Aligned_cols=37 Identities=19% Similarity=0.070 Sum_probs=30.4
Q ss_pred CCeEEE-EcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALI-IGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLV-tGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
+.+++| +||+|-+|...++... ..|.+|++++|++..
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk-----~~Ga~vI~~v~~~~~ 66 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGK-----LLNFNSISVIRDRPN 66 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHH-----HHTCEEEEEECCCTT
T ss_pred CCEEEEEeCCCchHHHHHHHHHh-----hcCCeEEEEEecccc
Confidence 456666 6999999999998888 689999999987653
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=91.22 E-value=0.18 Score=34.07 Aligned_cols=69 Identities=12% Similarity=0.072 Sum_probs=46.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCCCCCC--------------CC--------------CCcc-
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW--------------FP--------------TALV- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~~--------------~~--------------~~~v- 58 (176)
+.||-|.|+ |.+|++++..|+ ..+ .++..+++...... .. .+.+
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~-----~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvv 76 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIV-----QKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVI 76 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEE
T ss_pred CCeEEEECC-CHHHHHHHHHHH-----hCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEE
Confidence 468999995 999999998777 333 36888887553210 00 0111
Q ss_pred ----------cC----cHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ----------QE----SEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ----------~~----~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
.. +....+..|....+.+++.+.+.
T Consensus 77 itag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~ 115 (150)
T d1t2da1 77 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN 115 (150)
T ss_dssp ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred EecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhc
Confidence 11 23456889999999999999998
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.20 E-value=0.1 Score=34.84 Aligned_cols=33 Identities=12% Similarity=0.210 Sum_probs=26.9
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEE-EecC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARR 47 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~ 47 (176)
||.|.|++|-.|+.|++.+.+ ..++++.+ +++.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~----~~~~~l~~~~d~~ 34 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAA----ADDLTLSAELDAG 34 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHH----STTSEEEEEECTT
T ss_pred CEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEecC
Confidence 689999999999999999875 67888655 4443
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.11 E-value=0.08 Score=36.78 Aligned_cols=32 Identities=22% Similarity=0.212 Sum_probs=28.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
|+|.|.|+ |-.|++|+..|. +.|++|+.+.|.
T Consensus 1 MkI~ViGa-G~~GtalA~~la-----~~g~~V~l~~r~ 32 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLV-----DNGNEVRIWGTE 32 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHH-----HHCCEEEEECCG
T ss_pred CEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEEec
Confidence 58999995 889999999999 789999999884
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=91.11 E-value=0.14 Score=34.22 Aligned_cols=79 Identities=10% Similarity=0.090 Sum_probs=47.8
Q ss_pred CCeEEEEcCC---hHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-----CCCCcccCcHH-HHHHHHHHHHHHHHHH
Q 030483 9 KSVALIIGVT---GISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVQESEE-VNIFKNSTMLKNVLSV 79 (176)
Q Consensus 9 ~~~vLVtGat---GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----~~~~~v~~~~~-~~~~~N~~~t~~ll~a 79 (176)
.++|.|.|+| +-.|..+++.|. +.||+|+.+..+...-. .....+....+ ..+-++...+..+++.
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~-----~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i~vp~~~~~~~~~e 93 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLL-----EHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKPKLTMEYVEQ 93 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHH-----HTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCHHHHHHHHHH
T ss_pred CCeEEEEeecCCCCCchHHHHHHHH-----HCCCEEEEECCcccccCCCcccccccccCccceEEEEEeCHHHHHHHHHH
Confidence 4789999998 889999999999 79999998865432211 00000111111 1112333444577788
Q ss_pred HHhcCCCCCCccEEEEec
Q 030483 80 LVSSNSGRSRLRHVALLT 97 (176)
Q Consensus 80 ~~~~~~~~~~v~~vv~~S 97 (176)
|.+. +++.+.+.+
T Consensus 94 ~~~~-----g~k~v~~~~ 106 (139)
T d2d59a1 94 AIKK-----GAKVVWFQY 106 (139)
T ss_dssp HHHH-----TCSEEEECT
T ss_pred HHHh-----CCCEEEEec
Confidence 7776 567666543
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.04 E-value=0.12 Score=37.31 Aligned_cols=34 Identities=32% Similarity=0.424 Sum_probs=29.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++||+|.| +|+-|-..+.+|. +.|++|+.+-+++
T Consensus 5 ~~kViVIG-aG~aGL~aA~~L~-----~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 5 TGKVIIIG-SGVSGLAAARQLQ-----SFGMDVTLLEARD 38 (449)
T ss_dssp CCEEEEEC-CBHHHHHHHHHHH-----HTTCEEEEECSSS
T ss_pred CCcEEEEC-CCHHHHHHHHHHH-----hCCCCEEEEeCCC
Confidence 45799999 6999999999999 7999999997654
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=90.96 E-value=0.13 Score=34.88 Aligned_cols=37 Identities=22% Similarity=0.317 Sum_probs=30.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~ 49 (176)
.+.+|+|+|++|-+|...+..+. ..| ..|+++++++.
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~-----~~g~~~V~~~~~~~~ 64 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAK-----AVSGATIIGVDVREE 64 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HHTCCEEEEEESSHH
T ss_pred CCCEEEEEeccccceeeeeeccc-----ccccccccccccchh
Confidence 46789999999999999998888 466 47888887653
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=90.82 E-value=0.12 Score=34.52 Aligned_cols=33 Identities=15% Similarity=0.116 Sum_probs=28.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
-+++|+|. |-+|..+++.|. +.|++|+.+...+
T Consensus 4 nHiII~G~-g~~g~~l~~~L~-----~~~~~v~vId~d~ 36 (153)
T d1id1a_ 4 DHFIVCGH-SILAINTILQLN-----QRGQNVTVISNLP 36 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHH-----HTTCCEEEEECCC
T ss_pred CEEEEECC-CHHHHHHHHHHH-----HcCCCEEEEeccc
Confidence 36999997 789999999999 6899999998765
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=90.81 E-value=0.11 Score=35.26 Aligned_cols=36 Identities=25% Similarity=0.429 Sum_probs=28.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++|+|.| +|++|-.++..|. ..|.+|..+.+.+.
T Consensus 2 ~~~~VvIIG-gG~~G~e~A~~l~-----~~g~~v~v~~~~~~ 37 (185)
T d1q1ra1 2 ANDNVVIVG-TGLAGVEVAFGLR-----ASGWEGNIRLVGDA 37 (185)
T ss_dssp CSCEEEEEC-CSHHHHHHHHHHH-----HTTCCSEEEEECSC
T ss_pred CCCCEEEEC-CcHHHHHHHHHHH-----HcCCceEEEEecCc
Confidence 356888887 6999999999999 68888766655443
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=90.51 E-value=0.063 Score=37.02 Aligned_cols=36 Identities=19% Similarity=0.090 Sum_probs=28.9
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEE-EecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~ 48 (176)
..||.|.|++|-.|+.|++.+.+ .+++++.+ ++|..
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~----~~~~~lv~~~~~~~ 40 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALA----LEGVQLGAALEREG 40 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHH----STTEECCCEECCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEeccc
Confidence 35899999999999999999985 67888655 44543
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=90.43 E-value=0.11 Score=35.53 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=28.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
.+++|||.|+ |-.+++++..|. ..|. +|+.+.|+.
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~-----~~g~~~I~I~nR~~ 51 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFK-----NSGFEKLKIYARNV 51 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHH-----HTTCCCEEEECSCH
T ss_pred CCCeEEEECC-CHHHHHHHHHHH-----HCCCCEEEEecccH
Confidence 3578999997 559999999999 6786 588887753
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=90.43 E-value=0.1 Score=38.43 Aligned_cols=34 Identities=32% Similarity=0.551 Sum_probs=28.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~ 49 (176)
.+|+|.| +|.+|..++.+|. ++|+ +|+.+.|+..
T Consensus 2 ~dViIIG-aGi~G~s~A~~La-----~~G~~~V~liE~~~~ 36 (305)
T d1pj5a2 2 PRIVIIG-AGIVGTNLADELV-----TRGWNNITVLDQGPL 36 (305)
T ss_dssp CCEEEEC-CSHHHHHHHHHHH-----HTTCCCEEEECSSCT
T ss_pred CCEEEEC-cCHHHHHHHHHHH-----HcCCCcEEEEeCCCC
Confidence 3689999 5899999999999 6887 6999998753
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=89.92 E-value=0.054 Score=37.25 Aligned_cols=33 Identities=15% Similarity=0.344 Sum_probs=25.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
|+.+|+|.| +|++|-.++..|. ..|.+|..+.+
T Consensus 2 m~a~VvIIG-gG~~G~e~A~~l~-----~~g~~v~i~~~ 34 (183)
T d1d7ya1 2 LKAPVVVLG-AGLASVSFVAELR-----QAGYQGLITVV 34 (183)
T ss_dssp CCSSEEEEC-CSHHHHHHHHHHH-----HHTCCSCEEEE
T ss_pred CCCCEEEEC-ccHHHHHHHHHHH-----hcCCceEEEEE
Confidence 566799999 7999999999998 57776544443
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=89.83 E-value=0.14 Score=37.30 Aligned_cols=33 Identities=21% Similarity=0.349 Sum_probs=28.8
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
|+|.| +|..|..++.+|. ++|++|+.+.+....
T Consensus 6 vvIIG-aGi~Gls~A~~La-----~~G~~V~viE~~~~~ 38 (281)
T d2gf3a1 6 VIVVG-AGSMGMAAGYQLA-----KQGVKTLLVDAFDPP 38 (281)
T ss_dssp EEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSCSS
T ss_pred EEEEC-cCHHHHHHHHHHH-----HCCCcEEEEeCCCCC
Confidence 78888 6999999999999 699999999987543
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=89.75 E-value=0.14 Score=38.26 Aligned_cols=33 Identities=30% Similarity=0.337 Sum_probs=28.8
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++|.| +|+.|..++++|. +.|++|..+.+++.
T Consensus 3 dv~IIG-aG~sGl~~A~~L~-----~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 3 DYIIVG-SGLFGAVCANELK-----KLNKKVLVIEKRNH 35 (298)
T ss_dssp EEEEEC-CSHHHHHHHHHHG-----GGTCCEEEECSSSS
T ss_pred cEEEEC-CcHHHHHHHHHHH-----hCCCcEEEEECCCC
Confidence 588888 6999999999999 68999999987654
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.72 E-value=0.19 Score=34.66 Aligned_cols=35 Identities=31% Similarity=0.357 Sum_probs=30.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|+++|.| .|.||+.+++.|. ..|.+|++..+.|
T Consensus 23 ~Gk~v~V~G-yG~iG~g~A~~~r-----g~G~~V~v~e~dp 57 (163)
T d1li4a1 23 AGKVAVVAG-YGDVGKGCAQALR-----GFGARVIITEIDP 57 (163)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCH
T ss_pred cCCEEEEec-cccccHHHHHHHH-----hCCCeeEeeeccc
Confidence 578999988 8999999999999 7999999887654
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=89.61 E-value=0.15 Score=34.34 Aligned_cols=32 Identities=22% Similarity=0.119 Sum_probs=25.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~ 47 (176)
|||-|+|+ |.+|+.++..|+ ..| .++..+++.
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~-----~~~~~~elvL~Di~ 35 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLI-----AQGVADDYVFIDAN 35 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HHTCCSEEEEECSS
T ss_pred CeEEEECc-CHHHHHHHHHHH-----hcCCCceEEEEecc
Confidence 78999995 999999999998 444 367777654
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=89.34 E-value=0.15 Score=35.32 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=28.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
++|+|.| +|..|-..+.+|. +.|+ +|+.+.+++
T Consensus 1 P~V~IIG-aG~aGL~aA~~L~-----~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 1 PRVIVVG-AGMSGISAAKRLS-----EAGITDLLILEATD 34 (347)
T ss_dssp CCEEEEC-CBHHHHHHHHHHH-----HTTCCCEEEECSSS
T ss_pred CCEEEEC-CcHHHHHHHHHHH-----hCCCCcEEEEECCC
Confidence 3689999 6999999999999 6896 699998765
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=89.33 E-value=0.24 Score=34.47 Aligned_cols=38 Identities=21% Similarity=0.271 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
..++++.|.| .|-||+.+++.|. .-|.+|++.+|.+..
T Consensus 40 l~gk~vgIiG-~G~IG~~va~~l~-----~~g~~v~~~d~~~~~ 77 (181)
T d1qp8a1 40 IQGEKVAVLG-LGEIGTRVGKILA-----ALGAQVRGFSRTPKE 77 (181)
T ss_dssp CTTCEEEEES-CSTHHHHHHHHHH-----HTTCEEEEECSSCCC
T ss_pred ccCceEEEec-cccccccceeeee-----ccccccccccccccc
Confidence 3578999999 5779999999999 799999999987654
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.12 E-value=0.24 Score=33.63 Aligned_cols=37 Identities=16% Similarity=0.063 Sum_probs=29.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~ 50 (176)
.+.+|+|.|+ |-+|...+..+. ..|. +|++.++++.+
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~-----~~G~~~Vi~~d~~~~r 63 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAK-----AMGAAQVVVTDLSATR 63 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCSEEEEEESCHHH
T ss_pred CCCEEEEECC-CccHHHHHHHHH-----HcCCceEEeccCCHHH
Confidence 4578999986 999999998888 5777 79998887543
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.85 E-value=0.2 Score=33.02 Aligned_cols=40 Identities=25% Similarity=0.137 Sum_probs=28.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++|.| .||+|-.++..|.+.. ...|.+|+.+.+.+..
T Consensus 37 ~k~i~IvG-gG~~G~E~A~~l~~~~-~~~g~~Vt~i~~~~~~ 76 (137)
T d1m6ia2 37 VKSITIIG-GGFLGSELACALGRKA-RALGTEVIQLFPEKGN 76 (137)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHH-HHHTCEEEEECSSSST
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHHH-HhcCCEEEEecccccC
Confidence 46888887 5999999998884100 0357899998886543
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.71 E-value=0.11 Score=36.12 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=27.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARR 47 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~ 47 (176)
..+|||+||+|-+|+..++... ..|.+ |++.+++
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak-----~~Ga~~vi~~~~~ 65 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGH-----LLGCSRVVGICGT 65 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHH-----HTTCSEEEEEESS
T ss_pred CCEEEEECCCchhhHHHHHHHH-----HcCCcceecccch
Confidence 3689999999999999999888 57765 5555554
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=88.56 E-value=0.35 Score=33.34 Aligned_cols=36 Identities=11% Similarity=0.098 Sum_probs=28.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~ 49 (176)
.+++|||.|+ |..|++++.+|. ..|. +++.+.|++.
T Consensus 17 ~~k~vlIlGa-GGaarai~~al~-----~~g~~~i~i~nR~~~ 53 (182)
T d1vi2a1 17 KGKTMVLLGA-GGASTAIGAQGA-----IEGLKEIKLFNRRDE 53 (182)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCSEEEEEECSST
T ss_pred CCCEEEEECC-cHHHHHHHHHHh-----hcCCceEeeeccchH
Confidence 4689999997 558999999999 4565 5777888654
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=88.46 E-value=0.26 Score=34.76 Aligned_cols=37 Identities=24% Similarity=0.224 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++.|.| .|-||+.+++.|. .-|.+|++.++....
T Consensus 44 ~~ktvgIiG-~G~IG~~va~~l~-----~fg~~v~~~d~~~~~ 80 (199)
T d1dxya1 44 GQQTVGVMG-TGHIGQVAIKLFK-----GFGAKVIAYDPYPMK 80 (199)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSCCS
T ss_pred cceeeeeee-ccccccccccccc-----ccceeeeccCCccch
Confidence 468899988 7889999999999 799999999987554
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=88.37 E-value=0.37 Score=33.17 Aligned_cols=37 Identities=14% Similarity=0.100 Sum_probs=28.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
|||+|.| +|++|-.++..|.+. ..+.+|+.+.|.+..
T Consensus 1 ~KVvIIG-gG~~G~e~A~~l~~~---~~~~~V~v~~~~~~~ 37 (198)
T d1nhpa1 1 MKVIVLG-SSHGGYEAVEELLNL---HPDAEIQWYEKGDFI 37 (198)
T ss_dssp CEEEEEC-SSHHHHHHHHHHHHH---CTTSEEEEEESSSSS
T ss_pred CEEEEEC-CcHHHHHHHHHHHhc---CCCCeEEEEeCCCcc
Confidence 5799999 579999999999720 246789988886543
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=88.18 E-value=0.37 Score=32.98 Aligned_cols=34 Identities=21% Similarity=0.205 Sum_probs=27.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++|||.|+.| .+++++.+|. ..| +|+.+.|+.
T Consensus 17 ~~k~vlIlGaGG-~arai~~aL~-----~~~-~i~I~nR~~ 50 (177)
T d1nvta1 17 KDKNIVIYGAGG-AARAVAFELA-----KDN-NIIIANRTV 50 (177)
T ss_dssp CSCEEEEECCSH-HHHHHHHHHT-----SSS-EEEEECSSH
T ss_pred CCCEEEEECCcH-HHHHHHHHHc-----ccc-ceeeehhhh
Confidence 568999999655 8999999998 566 888888853
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=88.09 E-value=0.28 Score=34.67 Aligned_cols=36 Identities=22% Similarity=0.192 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++.|.| .|-||+.+++.|. .-|.+|++.++...
T Consensus 42 ~gk~vgIiG-~G~IG~~va~~l~-----~fg~~V~~~d~~~~ 77 (197)
T d1j4aa1 42 RDQVVGVVG-TGHIGQVFMQIME-----GFGAKVITYDIFRN 77 (197)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSCC
T ss_pred cCCeEEEec-ccccchhHHHhHh-----hhcccccccCcccc
Confidence 468999998 7999999999998 79999999987643
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=88.07 E-value=0.44 Score=33.43 Aligned_cols=37 Identities=22% Similarity=0.082 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++.|.| -|-||+.+++.|. .-|.+|++.++....
T Consensus 48 ~gktvgIiG-~G~IG~~va~~l~-----~fg~~v~~~d~~~~~ 84 (193)
T d1mx3a1 48 RGETLGIIG-LGRVGQAVALRAK-----AFGFNVLFYDPYLSD 84 (193)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEECTTSCT
T ss_pred eCceEEEec-cccccccceeeee-----ccccceeeccCcccc
Confidence 468999997 7889999999999 799999999986543
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=87.91 E-value=0.22 Score=34.22 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=28.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++|+|.|+.| .+++++..|. ..+-+|+.+.|+.
T Consensus 17 ~~k~vlIlGaGG-aarai~~aL~-----~~~~~i~I~nR~~ 51 (171)
T d1p77a1 17 PNQHVLILGAGG-ATKGVLLPLL-----QAQQNIVLANRTF 51 (171)
T ss_dssp TTCEEEEECCSH-HHHTTHHHHH-----HTTCEEEEEESSH
T ss_pred CCCEEEEECCcH-HHHHHHHHHc-----ccCceeeeccchH
Confidence 467899999755 7999999999 5677899998864
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=87.91 E-value=0.27 Score=32.00 Aligned_cols=36 Identities=25% Similarity=0.279 Sum_probs=28.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+++|.| +|-+|+.|++++.. ..+|+++++.-..+.
T Consensus 4 ~~v~I~G-aG~~G~~l~~~l~~----~~~~~iv~fiDdd~~ 39 (126)
T d2dt5a2 4 WGLCIVG-MGRLGSALADYPGF----GESFELRGFFDVDPE 39 (126)
T ss_dssp EEEEEEC-CSHHHHHHHHCSCC----CSSEEEEEEEESCTT
T ss_pred ceEEEEc-CCHHHHHHHHhHhh----cCCcEEEEEEeCchH
Confidence 4799998 58899999998874 688998887655443
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=87.33 E-value=0.21 Score=37.72 Aligned_cols=30 Identities=23% Similarity=0.169 Sum_probs=27.0
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
|+|.| +|+-|..++.+|. +.|++|..|-|.
T Consensus 5 VIVVG-sG~aG~v~A~rLa-----eaG~~VlvLEaG 34 (367)
T d1n4wa1 5 AVVIG-TGYGAAVSALRLG-----EAGVQTLMLEMG 34 (367)
T ss_dssp EEEEC-CSHHHHHHHHHHH-----HTTCCEEEEESS
T ss_pred EEEeC-cCHHHHHHHHHHH-----HCcCeEEEEecC
Confidence 67777 8999999999999 799999999884
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=87.18 E-value=0.49 Score=35.35 Aligned_cols=36 Identities=36% Similarity=0.265 Sum_probs=28.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|+|.| +|..|-..+..|++. ..+++|+++.|+..
T Consensus 5 KrVaIIG-aG~sGl~~A~~L~~~---~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 5 RKIAIIG-AGPSGLVTAKALLAE---KAFDQVTLFERRGS 40 (335)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTT---TCCSEEEEECSSSS
T ss_pred CeEEEEC-cCHHHHHHHHHHHHh---CCCCCEEEEECCCC
Confidence 6799998 699999999999830 13369999998854
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=87.00 E-value=0.62 Score=29.40 Aligned_cols=39 Identities=21% Similarity=0.107 Sum_probs=28.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++|.| .|++|-.++..|.+ + ...|.+|+.+.|.+..
T Consensus 18 p~~v~IiG-gG~ig~E~A~~l~~-~-~~~g~~Vtli~~~~~i 56 (117)
T d1feca2 18 PKRALCVG-GGYISIEFAGIFNA-Y-KARGGQVDLAYRGDMI 56 (117)
T ss_dssp CSEEEEEC-SSHHHHHHHHHHHH-H-SCTTCEEEEEESSSSS
T ss_pred CCeEEEEC-CChHHHHHHHHhHh-h-cccccccceecccccc
Confidence 37899988 59999999865420 0 0468899999987543
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=86.91 E-value=0.55 Score=31.75 Aligned_cols=34 Identities=24% Similarity=0.267 Sum_probs=23.7
Q ss_pred CeEEEEcCChHHHHHH-HHHhhCCCCCCCCcEEEEEe-cCC
Q 030483 10 SVALIIGVTGISGLSL-AEALKNPTTPGSPWKVYGAA-RRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l-~~~L~~~~~~~~g~~V~~l~-R~~ 48 (176)
.++.|.| +|.||+.+ .+.|.+ ....+++++. |+.
T Consensus 5 irvaIIG-aG~ig~~~~~~~l~~----~~~~el~avas~~~ 40 (157)
T d1nvmb1 5 LKVAIIG-SGNIGTDLMIKVLRN----AKYLEMGAMVGIDA 40 (157)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHH----CSSEEEEEEECSCT
T ss_pred cEEEEEc-CcHHHHHHHHHHHhh----CCcceEEEEEecch
Confidence 4899999 89999865 455542 3556888874 543
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=86.86 E-value=0.32 Score=32.57 Aligned_cols=36 Identities=19% Similarity=0.148 Sum_probs=29.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+.+|||.|+ |-+|...++.+. ..|.+|+++++++.
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~-----~~g~~v~~~~~~~~ 62 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAK-----AMGLNVVAVDIGDE 62 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred CCCEEEEeec-ccchhhhhHHHh-----cCCCeEeccCCCHH
Confidence 4678999875 779998888887 68889999987654
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=86.66 E-value=0.66 Score=31.83 Aligned_cols=36 Identities=19% Similarity=0.123 Sum_probs=31.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
..+|+++|.|.+..+|+-|+..|. .+|..|+.....
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~-----~~gatVt~~h~~ 70 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELL-----LAGCTTTVTHRF 70 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHH-----TTTCEEEEECSS
T ss_pred cccceEEEEeccccccHHHHHHHH-----Hhhccccccccc
Confidence 467999999999999999999999 689999877543
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=86.39 E-value=0.53 Score=34.57 Aligned_cols=33 Identities=24% Similarity=0.379 Sum_probs=22.4
Q ss_pred CeEEEEc-CCh-HH--HHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIG-VTG-IS--GLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtG-atG-fi--G~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
|||||++ ||| .+ ..+|+++|. ++||+|..++..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~-----~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLM-----AQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHH-----TTTCEEEEEECT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHH-----hCCCEEEEEEeC
Confidence 5677654 553 33 335889998 789999877643
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=86.12 E-value=0.53 Score=32.66 Aligned_cols=37 Identities=22% Similarity=0.034 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++.|.| .|.||+.+++.|. .-|.+|+..++....
T Consensus 43 ~~~~vgiiG-~G~IG~~va~~l~-----~fg~~v~~~d~~~~~ 79 (188)
T d1sc6a1 43 RGKKLGIIG-YGHIGTQLGILAE-----SLGMYVYFYDIENKL 79 (188)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSCCC
T ss_pred cceEEEEee-cccchhhhhhhcc-----cccceEeeccccccc
Confidence 467888886 8999999999998 799999999986543
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=85.96 E-value=0.48 Score=32.35 Aligned_cols=36 Identities=28% Similarity=0.369 Sum_probs=29.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~ 49 (176)
.+.+|+|.|+ |-||...++.+. ..|. .|+++++++.
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak-----~~Ga~~Vi~~d~~~~ 63 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAK-----LRGAGRIIGVGSRPI 63 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHH-----TTTCSCEEEECCCHH
T ss_pred CCCEEEEEcC-Ccchhhhhhhhh-----cccccccccccchhh
Confidence 4578999986 889999888888 6886 6998887654
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.65 E-value=0.53 Score=33.41 Aligned_cols=35 Identities=37% Similarity=0.292 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~ 50 (176)
.+|+|.| .|..|..++..|. ..|+ +|..+.|++..
T Consensus 2 ~~V~IvG-aG~aGl~~A~~L~-----~~Gi~~V~V~Er~~~~ 37 (288)
T d3c96a1 2 IDILIAG-AGIGGLSCALALH-----QAGIGKVTLLESSSEI 37 (288)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-----HTTCSEEEEEESSSSC
T ss_pred CEEEEEC-cCHHHHHHHHHHH-----hCCCCeEEEEeCCCCC
Confidence 4799998 5999999999998 6895 89999987653
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=85.31 E-value=0.48 Score=30.36 Aligned_cols=33 Identities=12% Similarity=0.180 Sum_probs=28.8
Q ss_pred CeEEEEcCC---hHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVT---GISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGat---GfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
|+|.|.|+| +-.|..+.+.|+ +.||+|+.+..+
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~-----~~g~~V~pVnP~ 37 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLL-----SKGFEVLPVNPN 37 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHH-----HTTCEEEEECTT
T ss_pred cEEEEEcccCCCCCcHHHHHHHHH-----HCCCEEEEEccc
Confidence 678999987 789999999999 799999988654
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=85.03 E-value=0.37 Score=35.96 Aligned_cols=35 Identities=23% Similarity=0.214 Sum_probs=30.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.-.|+|+| .|+.|-..+.+|. +.|.+|+++.+.+.
T Consensus 7 ~~dV~IIG-AG~sGl~~a~~L~-----~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 7 EVDVLVVG-AGFSGLYALYRLR-----ELGRSVHVIETAGD 41 (298)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSSS
T ss_pred CCCEEEEC-ccHHHHHHHHHHH-----hCCCCEEEEEcCCC
Confidence 44689999 5999999999999 79999999998754
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=84.91 E-value=0.56 Score=30.48 Aligned_cols=38 Identities=11% Similarity=0.179 Sum_probs=31.7
Q ss_pred CCCeEEEEcCC----------hHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVT----------GISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGat----------GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+++|||.|+. -+.+.+.+++|. +.|++++.+..+|..
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk-----~~g~~~IliN~NPeT 50 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALR-----EDGYETIMVNCNPET 50 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHH-----HTTCEEEEECCCTTS
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHH-----hcCCeEEEEecChhh
Confidence 35799999984 378999999999 799999988877654
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=84.77 E-value=0.63 Score=31.79 Aligned_cols=38 Identities=24% Similarity=0.377 Sum_probs=30.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPP 50 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~ 50 (176)
..+.+|+|+|+ |-+|...++.+. ..| .+|+++++++.+
T Consensus 28 ~~g~tVlI~G~-GgvGl~ai~~ak-----~~G~~~Vi~vd~~~~k 66 (176)
T d1d1ta2 28 KPGSTCVVFGL-GGVGLSVIMGCK-----SAGASRIIGIDLNKDK 66 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHH-----HTTCSEEEEECSCGGG
T ss_pred CCCCEEEEECC-CchhHHHHHHHH-----HcCCceEEEecCcHHH
Confidence 35678999986 789999999998 577 479999987654
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=84.60 E-value=0.052 Score=38.45 Aligned_cols=34 Identities=29% Similarity=0.294 Sum_probs=26.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcE------EEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWK------VYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~------V~~l~R~~~ 49 (176)
|||+|.| +|.+|...+.+|. ++|++ +..+++...
T Consensus 1 mkV~VIG-aGi~GlstA~~L~-----~~G~~v~v~e~~~i~~~~~~ 40 (246)
T d1kifa1 1 MRVVVIG-AGVIGLSTALCIH-----ERYHSVLQPLDVKVYADRFT 40 (246)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-----HHHTTTSSSCEEEEEESCCT
T ss_pred CEEEEEC-chHHHHHHHHHHH-----HCCCCceEEeeeeecccCCC
Confidence 5799999 6999999999999 68875 455555443
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.59 E-value=0.83 Score=31.40 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=32.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..+|+++|.|.+..+|+-|+.-|. .+|..|+.......
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~-----~~gatVt~~~~~t~ 74 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLL-----WNNATVTTCHSKTA 74 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHH-----HTTCEEEEECTTCS
T ss_pred cccceEEEEecCCccchHHHHHHH-----hccCceEEEecccc
Confidence 467999999999999999999999 68999988765443
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.58 E-value=0.4 Score=35.04 Aligned_cols=31 Identities=32% Similarity=0.482 Sum_probs=27.0
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|.| +|+.|-..+.+|. +.|++|+.+.+++
T Consensus 2 ViVIG-aG~aGL~aA~~L~-----~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVG-GGISGMAAAKLLH-----DSGLNVVVLEARD 32 (383)
T ss_dssp EEEEC-CBHHHHHHHHHHH-----HTTCCEEEEESSS
T ss_pred EEEEC-CCHHHHHHHHHHH-----hCCCCEEEEecCC
Confidence 67778 6999999999999 7999999998754
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=84.05 E-value=1.2 Score=30.93 Aligned_cols=36 Identities=19% Similarity=0.139 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++.|.| -|-||+.+++.|. .-|.+|...++...
T Consensus 46 ~g~tvgIiG-~G~IG~~va~~l~-----~fg~~v~~~d~~~~ 81 (191)
T d1gdha1 46 DNKTLGIYG-FGSIGQALAKRAQ-----GFDMDIDYFDTHRA 81 (191)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEECSSCC
T ss_pred cccceEEee-cccchHHHHHHHH-----hhcccccccccccc
Confidence 368899988 6889999999999 79999999987654
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=83.84 E-value=0.96 Score=27.53 Aligned_cols=33 Identities=21% Similarity=0.215 Sum_probs=25.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+||.++|-.|-==+.|++.|+ +.|++|.+-++.
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~-----~~G~~VsGSD~~ 34 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEF-----SNGNDVYGSNIE 34 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECSS
T ss_pred cEEEEEeECHHHHHHHHHHHH-----hCCCeEEEEeCC
Confidence 577777766643346888888 799999998765
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=83.70 E-value=0.78 Score=28.28 Aligned_cols=33 Identities=24% Similarity=0.411 Sum_probs=25.3
Q ss_pred CCeEEEEcCChHHH-HHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 9 KSVALIIGVTGISG-LSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 9 ~~~vLVtGatGfiG-~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+++.+.|-.| +| ++|++.|+ +.||+|.+-++.
T Consensus 8 ~~~ihfiGigG-~GMs~LA~~L~-----~~G~~VsGSD~~ 41 (96)
T d1p3da1 8 VQQIHFIGIGG-AGMSGIAEILL-----NEGYQISGSDIA 41 (96)
T ss_dssp CCEEEEETTTS-TTHHHHHHHHH-----HHTCEEEEEESC
T ss_pred CCEEEEEEECH-HHHHHHHHHHH-----hCCCEEEEEeCC
Confidence 46788776555 33 67889998 799999998875
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=83.66 E-value=1.1 Score=30.17 Aligned_cols=38 Identities=21% Similarity=0.317 Sum_probs=28.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+.+|||.|+.| +|...+..+.. ..+..|+++++++.+
T Consensus 28 ~GdtVlV~GaGG-~G~~~~~~~~~----~g~~~Vi~~~~~~~k 65 (176)
T d2jhfa2 28 QGSTCAVFGLGG-VGLSVIMGCKA----AGAARIIGVDINKDK 65 (176)
T ss_dssp TTCEEEEECCSH-HHHHHHHHHHH----TTCSEEEEECSCGGG
T ss_pred CCCEEEEECCCC-cHHHHHHHHHH----cCCceEEeecCcHHH
Confidence 457899999966 77777777772 344589999887654
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=83.38 E-value=0.86 Score=33.04 Aligned_cols=36 Identities=22% Similarity=0.029 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..+++|+|-| -|-+|+++++.|. +.|..|++++-..
T Consensus 29 l~g~~v~IqG-fGnVG~~~a~~L~-----~~Gakvv~vsD~~ 64 (242)
T d1v9la1 29 IEGKTVAIQG-MGNVGRWTAYWLE-----KMGAKVIAVSDIN 64 (242)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEEECSS
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHH-----HcCCeEEEeeccc
Confidence 3568999997 8999999999999 7999999887654
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=83.37 E-value=1.1 Score=29.94 Aligned_cols=39 Identities=15% Similarity=0.313 Sum_probs=26.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
..+.+|+|.|+.| +|...+..+.. ..+..|+++++++.+
T Consensus 27 k~g~~VlI~G~Gg-~g~~~~~~~~~----~g~~~Vi~~~~~~~r 65 (175)
T d1cdoa2 27 EPGSTCAVFGLGA-VGLAAVMGCHS----AGAKRIIAVDLNPDK 65 (175)
T ss_dssp CTTCEEEEECCSH-HHHHHHHHHHH----TTCSEEEEECSCGGG
T ss_pred CCCCEEEEEecCC-ccchHHHHHHH----HhhchheeecchHHH
Confidence 3567899999877 55555555552 455679999887654
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=83.36 E-value=0.7 Score=32.59 Aligned_cols=35 Identities=23% Similarity=0.130 Sum_probs=30.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
..+++|+|-| -|-+|+++++.|. +.|..|++.+.+
T Consensus 25 L~gk~v~IqG-~G~VG~~~A~~L~-----~~Gakvvv~d~d 59 (201)
T d1c1da1 25 LDGLTVLVQG-LGAVGGSLASLAA-----EAGAQLLVADTD 59 (201)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSC
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEecch
Confidence 3568999998 8889999999999 799999887654
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.93 E-value=0.54 Score=37.08 Aligned_cols=34 Identities=24% Similarity=0.279 Sum_probs=27.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
+.||||.|+.| +|+.+++.|. ..|. +++.++...
T Consensus 37 ~~kVlvvG~Gg-lG~ei~k~L~-----~~Gvg~i~lvD~D~ 71 (426)
T d1yovb1 37 TCKVLVIGAGG-LGCELLKNLA-----LSGFRQIHVIDMDT 71 (426)
T ss_dssp HCCEEEECSST-THHHHHHHHH-----TTTCCCEEEECCCB
T ss_pred cCeEEEECCCH-HHHHHHHHHH-----HcCCCeEEEEECCC
Confidence 35899999877 9999999999 6887 577777643
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=82.86 E-value=0.49 Score=32.29 Aligned_cols=37 Identities=22% Similarity=0.343 Sum_probs=29.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~ 50 (176)
.+.+|+|.|+ |-+|...++.+. ..|. .|+++++++.+
T Consensus 27 ~G~~VlV~Ga-GgvGl~a~~~ak-----~~G~~~Vi~~d~~~~k 64 (174)
T d1p0fa2 27 PGSTCAVFGL-GGVGFSAIVGCK-----AAGASRIIGVGTHKDK 64 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HHTCSEEEEECSCGGG
T ss_pred CCCEEEEECC-CchhHHHHHHHH-----HcCCceeeccCChHHH
Confidence 5678999986 889999999888 5665 68888887654
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=82.79 E-value=1.3 Score=30.44 Aligned_cols=36 Identities=14% Similarity=0.039 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++.|.| .|-||+.+++.|. .-|.+|...+|...
T Consensus 43 ~~~~vgiiG-~G~IG~~va~~l~-----~fg~~v~~~d~~~~ 78 (188)
T d2naca1 43 EAMHVGTVA-AGRIGLAVLRRLA-----PFDVHLHYTDRHRL 78 (188)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHG-----GGTCEEEEECSSCC
T ss_pred cccceeecc-ccccchhhhhhhh-----ccCceEEEEeeccc
Confidence 467888888 7889999999999 78999999998654
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=82.39 E-value=1.4 Score=30.24 Aligned_cols=36 Identities=14% Similarity=0.021 Sum_probs=30.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++.|.| .|-||+.+++.|. .-|.+|++.+|...
T Consensus 43 ~~k~vgiiG-~G~IG~~va~~~~-----~fg~~v~~~d~~~~ 78 (184)
T d1ygya1 43 FGKTVGVVG-LGRIGQLVAQRIA-----AFGAYVVAYDPYVS 78 (184)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEECTTSC
T ss_pred cceeeeecc-ccchhHHHHHHhh-----hccceEEeecCCCC
Confidence 457788877 7889999999999 79999999987654
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=81.84 E-value=0.5 Score=35.62 Aligned_cols=30 Identities=27% Similarity=0.241 Sum_probs=26.6
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++|.| +|+-|..++.+|. +.|++|..|-+.
T Consensus 10 vIVVG-sG~aG~v~A~rLa-----eaG~~VlvLEaG 39 (370)
T d3coxa1 10 ALVIG-SGYGGAVAALRLT-----QAGIPTQIVEMG 39 (370)
T ss_dssp EEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSS
T ss_pred EEEEC-cCHHHHHHHHHHH-----HCCCeEEEEeCC
Confidence 67777 7999999999999 789999999874
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=81.66 E-value=0.81 Score=33.64 Aligned_cols=38 Identities=29% Similarity=0.355 Sum_probs=28.1
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
|+|.| .|..|..++..|.+...+..|++|+.+.|++..
T Consensus 10 V~IvG-aG~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~ 47 (360)
T d1pn0a1 10 VLIVG-AGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 47 (360)
T ss_dssp EEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred EEEEC-cCHHHHHHHHHHHhcccccCCCcEEEEcCCCCC
Confidence 78888 599999999999410000489999999987654
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=81.60 E-value=0.67 Score=30.36 Aligned_cols=38 Identities=24% Similarity=0.390 Sum_probs=31.7
Q ss_pred CCCeEEEEcCC----------hHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVT----------GISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGat----------GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
..++|||.|+. -+.+.+.+++|. +.|++++.+..++..
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alk-----e~g~~~iliN~NP~T 53 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALR-----EEGYRVINVNSNPAT 53 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHH-----HHTCEEEEECSCTTC
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHH-----HcCCeEEEecCchHh
Confidence 35899999983 468999999999 799999988877654
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=81.42 E-value=0.83 Score=33.09 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=28.8
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
-|+|.|| |.-|-..+.+|.+ ..|++|..+.+++.
T Consensus 35 DViVIGa-GpaGL~aA~~LA~----~~G~~V~vlE~~~~ 68 (278)
T d1rp0a1 35 DVVVVGA-GSAGLSAAYEISK----NPNVQVAIIEQSVS 68 (278)
T ss_dssp EEEEECC-SHHHHHHHHHHHT----STTSCEEEEESSSS
T ss_pred CEEEECC-CHHHHHHHHHHHH----ccCCeEEEEecCCC
Confidence 4899996 9999999999972 35999999998764
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=80.96 E-value=1.2 Score=30.43 Aligned_cols=34 Identities=21% Similarity=0.228 Sum_probs=28.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
|+.||.|-| -|-||+.++++|.. ....+|.++.-
T Consensus 1 M~irIaING-fGRIGR~v~Ral~~----~~dieiVaINd 34 (172)
T d2czca2 1 MKVKVGVNG-YGTIGKRVAYAVTK----QDDMELIGITK 34 (172)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHT----CTTEEEEEEEE
T ss_pred CcEEEEEEC-CCHHHHHHHHHHHh----CCCceEEEEec
Confidence 567999999 69999999999985 46688887754
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=80.77 E-value=0.73 Score=34.23 Aligned_cols=32 Identities=28% Similarity=0.345 Sum_probs=27.7
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.| +|.-|.-++.+|. +.|++|..|-+...
T Consensus 7 viIVG-sG~aG~v~A~~La-----~~G~kVlvLEaG~~ 38 (379)
T d2f5va1 7 VVIVG-SGPIGCTYARELV-----GAGYKVAMFDIGEI 38 (379)
T ss_dssp EEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSCC
T ss_pred EEEEC-cCHHHHHHHHHHh-----hCCCeEEEEecCCC
Confidence 67777 7999999999999 79999999987543
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=80.19 E-value=1.6 Score=29.95 Aligned_cols=32 Identities=25% Similarity=0.358 Sum_probs=27.0
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
||.|-| .|-||+.+++.|.+ ..+.+|+++...
T Consensus 3 KVaING-fGRIGR~v~Ral~~----~~dievVaInd~ 34 (178)
T d1b7go1 3 NVAVNG-YGTIGKRVADAIIK----QPDMKLVGVAKT 34 (178)
T ss_dssp EEEEEC-CSHHHHHHHHHHHT----CTTEEEEEEECS
T ss_pred EEEEEC-CCHHHHHHHHHHHh----CCCCEEEEEECC
Confidence 688888 89999999999995 567899888654
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=80.11 E-value=0.84 Score=30.88 Aligned_cols=35 Identities=26% Similarity=0.178 Sum_probs=26.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEE-EEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKV-YGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V-~~l~R~~ 48 (176)
.+.+|+|.|+ |-||...++.+. ..|.++ ++.++++
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak-----~~g~~~v~~~~~~~ 63 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAK-----VCGASIIIAVDIVE 63 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHH-----HHTCSEEEEEESCH
T ss_pred CCCEEEEeCC-CHHHhhhhhccc-----ccccceeeeeccHH
Confidence 4678999997 889999998887 567754 5555554
|